BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780484|ref|YP_003064897.1| GTPase EngB [Candidatus Liberibacter asiaticus str. psy62] (212 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780484|ref|YP_003064897.1| GTPase EngB [Candidatus Liberibacter asiaticus str. psy62] gi|254040161|gb|ACT56957.1| GTPase EngB [Candidatus Liberibacter asiaticus str. psy62] Length = 212 Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust. Identities = 212/212 (100%), Positives = 212/212 (100%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN Sbjct: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST Sbjct: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN Sbjct: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 YPTAHPEVIPTSSVKRKGIEVLRKAILETINY Sbjct: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 >gi|315122060|ref|YP_004062549.1| GTPase EngB [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495462|gb|ADR52061.1| GTPase EngB [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 192 Score = 308 bits (788), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 143/190 (75%), Positives = 166/190 (87%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 LLP+ GPPEIAFSGRSNVGKSSLIN+L+NRKNLARTSN+PGRTQ +NFF+P D S K+N Sbjct: 3 LLPEEGPPEIAFSGRSNVGKSSLINMLLNRKNLARTSNSPGRTQEINFFIPSDCSGRKDN 62 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 LP M LVDMPGYGYA+APKKNV +WG L+VRYL ERSTLRCVYLLIDCRHG+K+IDQDVF Sbjct: 63 LPTMTLVDMPGYGYAKAPKKNVAAWGNLVVRYLRERSTLRCVYLLIDCRHGIKKIDQDVF 122 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + LDK+AVSYQ++LTK DKLSP AQE LE TK L++N+P AH +VI TSS+K GIE+L Sbjct: 123 ALLDKEAVSYQVILTKADKLSPAMAQEKLENTKSLLQNHPAAHSDVILTSSIKGNGIEML 182 Query: 203 RKAILETINY 212 RK+ILETI Y Sbjct: 183 RKSILETIIY 192 >gi|163868926|ref|YP_001610153.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella tribocorum CIP 105476] gi|189037171|sp|A9IXE1|ENGB_BART1 RecName: Full=Probable GTP-binding protein EngB gi|161018600|emb|CAK02158.1| GTP-binding protein [Bartonella tribocorum CIP 105476] Length = 214 Score = 248 bits (632), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 121/205 (59%), Positives = 151/205 (73%), Gaps = 1/205 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F+++ WIF+RGVP I LP GPPEIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 10 VFSRN-WIFIRGVPAIRFLPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRT 68 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+F+P FS + +LP A+VDMPGYG+A APK VD+W LI YL RSTL+ VY Sbjct: 69 QELNYFIPDGFSGQRGDLPPFAVVDMPGYGFAAAPKNLVDAWTNLIFSYLRGRSTLKRVY 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K D+DV + LDK AVSYQIVLTK DK+ ++ + T+ + +P A+ Sbjct: 129 LLIDSRHGIKNNDEDVLALLDKAAVSYQIVLTKSDKIKSNALEKLIMITQTKLLKHPAAY 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE++ TSS K G+E LR AIL+TI Sbjct: 189 PEILATSSEKAYGLEELRAAILQTI 213 >gi|222147368|ref|YP_002548325.1| ribosome biogenesis GTP-binding protein YsxC [Agrobacterium vitis S4] gi|254783181|sp|B9JZK9|ENGB_AGRVS RecName: Full=Probable GTP-binding protein EngB gi|221734358|gb|ACM35321.1| GTP-binding protein [Agrobacterium vitis S4] Length = 219 Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 124/205 (60%), Positives = 151/205 (73%), Gaps = 8/205 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 17 WIFIRGVPSMKFLPPEGPLEIAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYF 76 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP+ +S ++LP MALVDMPGYGYA+APK +VD+W L+ YL R+TL+ VYLLID R Sbjct: 77 VPEGYSGEGDDLPPMALVDMPGYGYAKAPKDHVDAWTKLVFDYLRGRATLKRVYLLIDSR 136 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPE 187 HG+K D+DV + LDK A+SYQIVLTK DK+ P +ETLEK IR P A+P Sbjct: 137 HGIKANDEDVLTLLDKAAMSYQIVLTKTDKIKEAGVPRLIEETLEK----IRKRPAAYPF 192 Query: 188 VIPTSSVKRKGIEVLRKAILETINY 212 V+ TSS K KG++ LR AI ET+ + Sbjct: 193 VLSTSSEKDKGLKELRAAICETVGH 217 >gi|240850502|ref|YP_002971901.1| GTP-ase EngB [Bartonella grahamii as4aup] gi|240267625|gb|ACS51213.1| GTP-ase EngB [Bartonella grahamii as4aup] Length = 214 Score = 246 bits (629), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 123/205 (60%), Positives = 151/205 (73%), Gaps = 1/205 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 IF+++ WIF+RGVP I LP GPPEIAF+GRSNVGKSSLIN LV +K+LARTSN PGRT Sbjct: 10 IFSRN-WIFIRGVPAIRFLPPEGPPEIAFAGRSNVGKSSLINALVQQKSLARTSNTPGRT 68 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP FS +LP +ALVDMPGYG+A APK VD+W LI YL R+TL+ VY Sbjct: 69 QELNYFVPDGFSGQLGDLPPLALVDMPGYGFAAAPKNLVDAWTNLIFSYLRGRTTLKRVY 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K D+DV S LDK AVSYQIVLTK DK+ ++ + T+ + P A+ Sbjct: 129 ILIDSRHGIKNNDEDVLSLLDKAAVSYQIVLTKSDKIKSNALEKLIMSTQTKLLKRPAAY 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE++ TSS K G+E LR AIL+TI Sbjct: 189 PELLVTSSEKALGLEELRAAILQTI 213 >gi|150395306|ref|YP_001325773.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium medicae WSM419] gi|166225985|sp|A6U5K8|ENGB_SINMW RecName: Full=Probable GTP-binding protein EngB gi|150026821|gb|ABR58938.1| GTP-binding protein HSR1-related [Sinorhizobium medicae WSM419] Length = 217 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 124/199 (62%), Positives = 145/199 (72%), Gaps = 8/199 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV K LARTSN PGRTQ LN+F Sbjct: 17 WIFIRGVPSMKFLPPEGPTEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYF 76 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S ++LP MALVDMPGYGYA+APK+ VD+W L+ YL RSTL+ VY+LID R Sbjct: 77 VPDGYSGEADDLPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLKRVYVLIDAR 136 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPE 187 HG+K+ D++V + LDK AVSYQIVLTK DK+ P ETLEK IR P A PE Sbjct: 137 HGIKKNDEEVLALLDKAAVSYQIVLTKTDKIKAAGVPRLLAETLEK----IRKRPAAFPE 192 Query: 188 VIPTSSVKRKGIEVLRKAI 206 V+ TSS K +GIE LR AI Sbjct: 193 VLSTSSEKGEGIEELRAAI 211 >gi|13474032|ref|NP_105600.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium loti MAFF303099] gi|24418390|sp|Q98D85|ENGB_RHILO RecName: Full=Probable GTP-binding protein EngB gi|14024784|dbj|BAB51386.1| GTP-binding protein [Mesorhizobium loti MAFF303099] Length = 212 Score = 245 bits (625), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 123/211 (58%), Positives = 148/211 (70%), Gaps = 1/211 (0%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M++ +FT+ WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LVN+K LARTSN Sbjct: 1 MITTDLFTR-GWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSN 59 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ LN+FVP FS +LP MALVDMPGYGYA APK+ VD W L+ YL R T Sbjct: 60 TPGRTQELNYFVPDGFSGEGADLPPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVT 119 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ VY+LID RHG+K D +V S LDK AVSYQIVLTK DK+ +E+T I+ Sbjct: 120 LKRVYVLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDKIKVAGVPRLIEETLQKIKK 179 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 P A P V+ TSS K +G+E L+ AI+ N Sbjct: 180 RPAAFPFVLATSSEKGEGLEELQAAIVLAAN 210 >gi|110632739|ref|YP_672947.1| GTPase EngB [Mesorhizobium sp. BNC1] gi|119369212|sp|Q11LE3|ENGB_MESSB RecName: Full=Probable GTP-binding protein EngB gi|110283723|gb|ABG61782.1| GTP-binding protein [Chelativorans sp. BNC1] Length = 225 Score = 245 bits (625), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 118/200 (59%), Positives = 143/200 (71%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GPPE+AF+GRSNVGKSSLIN LV RK LARTSN PGRTQ LN+F Sbjct: 24 WIFIRGVPAMKFLPPEGPPEVAFAGRSNVGKSSLINGLVGRKGLARTSNTPGRTQELNYF 83 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP+ +S +LP MALVDMPGYG+A+APK VD+W L+ YL R TL+ VYLLID R Sbjct: 84 VPEGYSGEAGDLPPMALVDMPGYGFAKAPKAQVDAWTKLVFDYLRGRVTLKRVYLLIDAR 143 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ID++V LD AVSYQIVLTK DK+ + + +T I P A PEVI T Sbjct: 144 HGIKKIDEEVMDLLDSAAVSYQIVLTKADKIKSPAVTKLVAETGQKIVKRPAAFPEVIAT 203 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K +G+E LR AI+ + Sbjct: 204 SSEKGEGLEELRAAIVHAVT 223 >gi|15964196|ref|NP_384549.1| GTPase EngB [Sinorhizobium meliloti 1021] gi|307301340|ref|ZP_07581102.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium meliloti BL225C] gi|307318010|ref|ZP_07597447.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium meliloti AK83] gi|24418387|sp|Q92SF6|ENGB_RHIME RecName: Full=Probable GTP-binding protein EngB gi|15073372|emb|CAC41880.1| Hypothetical GTP-binding protein [Sinorhizobium meliloti 1021] gi|306896412|gb|EFN27161.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium meliloti AK83] gi|306903796|gb|EFN34383.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium meliloti BL225C] Length = 217 Score = 245 bits (625), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 124/199 (62%), Positives = 144/199 (72%), Gaps = 8/199 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV K LARTSN PGRTQ LN+F Sbjct: 17 WIFIRGVPSMKFLPPEGPTEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYF 76 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S +LP MALVDMPGYGYA+APK+ VD+W L+ YL RSTL+ VY+LID R Sbjct: 77 VPDGYSGEAGDLPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLKRVYVLIDAR 136 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPE 187 HG+K+ D+DV + LDK AVSYQIVLTK DK+ P ETLEK I+ P A PE Sbjct: 137 HGIKKNDEDVLALLDKAAVSYQIVLTKTDKIKAAGVPRLVAETLEK----IKKRPAAFPE 192 Query: 188 VIPTSSVKRKGIEVLRKAI 206 V+ TSS K +GIE LR AI Sbjct: 193 VLSTSSEKGEGIEDLRAAI 211 >gi|15887733|ref|NP_353414.1| GTPase EngB [Agrobacterium tumefaciens str. C58] gi|24418376|sp|Q8UIB4|ENGB_AGRT5 RecName: Full=Probable GTP-binding protein EngB gi|15155296|gb|AAK86199.1| GTP-binding protein [Agrobacterium tumefaciens str. C58] Length = 217 Score = 243 bits (621), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 122/203 (60%), Positives = 148/203 (72%), Gaps = 8/203 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV K LARTSN PGRTQ LN+F Sbjct: 17 WIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYF 76 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP+ +S +LP MALVDMPGYGYA+APK +VD+W L+ YL R+TL+ VY+LID R Sbjct: 77 VPEGYSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSR 136 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPE 187 HG+K+ D++V S LDK AVSYQ+VLTK DK+ P ETLEK IR P A+PE Sbjct: 137 HGIKKNDEEVLSLLDKAAVSYQVVLTKTDKIKDVGVPRLIGETLEK----IRKRPAAYPE 192 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ TSS K G++ LR I+ T+ Sbjct: 193 VLATSSEKSFGLDDLRAEIVRTV 215 >gi|325291816|ref|YP_004277680.1| ribosome biogenesis GTP-binding protein YsxC [Agrobacterium sp. H13-3] gi|325059669|gb|ADY63360.1| ribosome biogenesis GTP-binding protein YsxC [Agrobacterium sp. H13-3] Length = 217 Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 121/204 (59%), Positives = 148/204 (72%), Gaps = 8/204 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV K LARTSN PGRTQ LN+F Sbjct: 17 WIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYF 76 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP+ +S +LP MALVDMPGYGYA+APK +VD+W L+ YL R+TL+ VY+LID R Sbjct: 77 VPEGYSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSR 136 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPE 187 HG+K+ D++V LDK AVSYQ+VLTK DK+ P ETLEK IR P A+PE Sbjct: 137 HGIKKNDEEVLGLLDKAAVSYQVVLTKTDKIKDVGVPRLISETLEK----IRKRPAAYPE 192 Query: 188 VIPTSSVKRKGIEVLRKAILETIN 211 V+ TSS K G++ LR I+ T++ Sbjct: 193 VLATSSEKSFGLDSLRAEIVRTVS 216 >gi|49475955|ref|YP_033996.1| GTPase EngB [Bartonella henselae str. Houston-1] gi|81647688|sp|Q6G2G5|ENGB_BARHE RecName: Full=Probable GTP-binding protein EngB gi|49238763|emb|CAF28024.1| GTP-binding protein cgpa [Bartonella henselae str. Houston-1] Length = 215 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 118/199 (59%), Positives = 147/199 (73%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W+F+RGVP I LP GPPEIAF+GRSNVGKSSLIN LV +K+LARTSN PGRTQ LN+F Sbjct: 15 WVFIRGVPTIRFLPPEGPPEIAFAGRSNVGKSSLINALVRQKSLARTSNMPGRTQELNYF 74 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP FS +LP +ALVDMPGYG+A+APK VD+W LI YL R+TL+ VY+LID R Sbjct: 75 VPDGFSGRPEDLPPIALVDMPGYGFAKAPKNLVDAWTDLIYSYLRGRTTLKRVYVLIDSR 134 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D ++ LDK AVSYQIVLTK DK+ + ++ + TK + P A+PE++ T Sbjct: 135 HGIKKNDAEILELLDKAAVSYQIVLTKSDKIKSSVLEQRIITTKTKLLKRPAAYPEILAT 194 Query: 192 SSVKRKGIEVLRKAILETI 210 SS K G+E LR AIL+TI Sbjct: 195 SSEKAFGLEELRAAILQTI 213 >gi|319780375|ref|YP_004139851.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166263|gb|ADV09801.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 219 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/211 (57%), Positives = 147/211 (69%), Gaps = 1/211 (0%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 ++ +FT+ WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LVN+K LARTSN Sbjct: 8 IIGTELFTR-GWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSN 66 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ LN+FVP FS +LP +ALVDMPGYGYA APK+ VD W L+ YL R T Sbjct: 67 TPGRTQELNYFVPDGFSGEGADLPPLALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVT 126 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ VY+LID RHG+K D +V S LDK AVSYQIVLTK DK+ +E+T I+ Sbjct: 127 LKRVYVLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDKIKTAGVPRLIEETLAKIKK 186 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 P A P V+ TSS K +G+E L+ AI+ N Sbjct: 187 RPAAFPFVLATSSEKAEGLEELQAAIVLAAN 217 >gi|260461154|ref|ZP_05809403.1| GTP-binding protein HSR1-related protein [Mesorhizobium opportunistum WSM2075] gi|259033188|gb|EEW34450.1| GTP-binding protein HSR1-related protein [Mesorhizobium opportunistum WSM2075] Length = 219 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 122/210 (58%), Positives = 146/210 (69%), Gaps = 1/210 (0%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +FT+ WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LVN+K LARTSN Sbjct: 9 IGTDLFTR-GWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNT 67 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ LN+FVP FS +LP MALVDMPGYGYA APK+ VD W L+ YL R TL Sbjct: 68 PGRTQELNYFVPDGFSGEGADLPPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTL 127 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + VY+LID RHG+K D +V S LDK AVSYQIVLTK DK+ +E+T I+ Sbjct: 128 KRVYVLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDKIKVAGVPRLIEETLAKIKKR 187 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 P A P V+ TSS K +G+E L+ AI+ N Sbjct: 188 PAAFPFVLATSSEKGEGLEELQAAIVLAAN 217 >gi|218515056|ref|ZP_03511896.1| GTPase EngB [Rhizobium etli 8C-3] Length = 217 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 115/200 (57%), Positives = 146/200 (73%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 13 WIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ VY+LID R Sbjct: 73 VPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D+DV + LDK AVSYQ+VLTK DK++ + L +T IR P A+P V+ T Sbjct: 133 HGIKKNDEDVLTLLDKAAVSYQLVLTKTDKITAPAVPKLLAETADKIRKRPAAYPAVLST 192 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K G++ LR+AI +T+ Sbjct: 193 SSEKGDGLDDLRQAIAQTVG 212 >gi|163757862|ref|ZP_02164951.1| GTPase EngB [Hoeflea phototrophica DFL-43] gi|162285364|gb|EDQ35646.1| GTPase EngB [Hoeflea phototrophica DFL-43] Length = 225 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 117/205 (57%), Positives = 148/205 (72%), Gaps = 1/205 (0%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S T+F K W+F+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV K LARTSN Sbjct: 16 LSATLFAKP-WVFIRGVPSLKFLPPEGPPEIAFAGRSNVGKSSLINALVGAKGLARTSNT 74 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ LN+FVP +S +++LP MALVDMPGYGYA+APK+ VD W L+ Y+ RSTL Sbjct: 75 PGRTQELNYFVPGGYSGAEDDLPPMALVDMPGYGYAKAPKEQVDLWTKLVFDYMRGRSTL 134 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + VYLLID RHG+K+ D++V LDK A+SYQ+VLTK DK+ + +T ++ Sbjct: 135 KRVYLLIDSRHGIKKNDEEVMDLLDKAAMSYQVVLTKTDKIKEAGVPRLIGETLNKLKRR 194 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 P A+PEV+ TSS K G++ LR AI Sbjct: 195 PAAYPEVLATSSEKANGVDDLRIAI 219 >gi|121602307|ref|YP_989324.1| GTPase EngB [Bartonella bacilliformis KC583] gi|166225944|sp|A1UTM1|ENGB_BARBK RecName: Full=Probable GTP-binding protein EngB gi|120614484|gb|ABM45085.1| GTP-binding protein [Bartonella bacilliformis KC583] Length = 215 Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 115/199 (57%), Positives = 144/199 (72%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP I LP GPPEIAF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 15 WIFIRGVPTIQFLPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYF 74 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP FS K + P MALVDMPGYG+A+APK VD+W L+ YL R+TL+ VY+LID R Sbjct: 75 VPDGFSGSKEDFPPMALVDMPGYGFAQAPKNLVDAWTHLVFNYLRGRTTLKRVYILIDSR 134 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D++V LDK AVSYQI+LTK DK+ + + T+ + P A+PE++ T Sbjct: 135 HGIKKNDEEVLDLLDKAAVSYQIILTKSDKIKSNMLENLMTTTQMSLLKRPAAYPELLTT 194 Query: 192 SSVKRKGIEVLRKAILETI 210 S+ K G+E LR AIL+ + Sbjct: 195 SAEKALGLEELRTAILQAV 213 >gi|49474532|ref|YP_032574.1| GTPase EngB [Bartonella quintana str. Toulouse] gi|81646890|sp|Q6FZ15|ENGB_BARQU RecName: Full=Probable GTP-binding protein EngB gi|49240036|emb|CAF26455.1| GTP-binding protein cgpA [Bartonella quintana str. Toulouse] Length = 215 Score = 241 bits (615), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 122/205 (59%), Positives = 147/205 (71%), Gaps = 1/205 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 IF++ WIF+RG+P I LP GPPEIAF+GRSNVGKSSLIN LV +K+LARTSN PGRT Sbjct: 10 IFSRK-WIFIRGIPTIHFLPPEGPPEIAFAGRSNVGKSSLINALVQQKSLARTSNTPGRT 68 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP FS NLP +ALVDMPGYG+A APK VD+W LI YL R+TL+ VY Sbjct: 69 QELNYFVPDGFSGEPGNLPPIALVDMPGYGFAEAPKNLVDAWTHLIFSYLRGRTTLKRVY 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D DV LDK AVSYQIVLTK DK + + TK + +P A+ Sbjct: 129 VLIDSRHGIKKNDGDVLDLLDKAAVSYQIVLTKSDKTKSNELAKLIMITKTKLLKHPAAY 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE++ TSS K G+E LR AIL+ I Sbjct: 189 PELLVTSSEKALGLEELRAAILQAI 213 >gi|190890107|ref|YP_001976649.1| GTP-binding protein [Rhizobium etli CIAT 652] gi|238692551|sp|B3Q039|ENGB_RHIE6 RecName: Full=Probable GTP-binding protein EngB gi|190695386|gb|ACE89471.1| GTP-binding protein [Rhizobium etli CIAT 652] Length = 217 Score = 241 bits (615), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 115/200 (57%), Positives = 145/200 (72%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 13 WIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ VY+LID R Sbjct: 73 VPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D+DV + LDK AVSYQ+VLTK DK+ + L +T IR P A+P V+ T Sbjct: 133 HGIKKNDEDVLTLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRPAAYPAVLST 192 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K G++ LR+AI +T+ Sbjct: 193 SSEKGDGLDDLRQAIAQTVG 212 >gi|218461047|ref|ZP_03501138.1| GTPase EngB [Rhizobium etli Kim 5] Length = 217 Score = 241 bits (615), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 116/200 (58%), Positives = 145/200 (72%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 13 WIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ VY+LID R Sbjct: 73 VPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D+DV + LDK AVSYQ+VLTK DK+ + L +T IR P A+P V+ T Sbjct: 133 HGIKKNDEDVLTLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRPAAYPFVLST 192 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K G++ LR+AI ET+ Sbjct: 193 SSEKGDGLDDLRQAIAETVG 212 >gi|327192536|gb|EGE59488.1| GTP-binding protein [Rhizobium etli CNPAF512] Length = 217 Score = 241 bits (614), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 115/200 (57%), Positives = 145/200 (72%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 13 WIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ VY+LID R Sbjct: 73 VPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D+DV + LDK AVSYQ+VLTK DK+ + L +T IR P A+P V+ T Sbjct: 133 HGIKKNDEDVLTLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRPAAYPAVLST 192 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K G++ LR+AI +T+ Sbjct: 193 SSEKGDGLDDLRQAIAQTVG 212 >gi|227820667|ref|YP_002824637.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium fredii NGR234] gi|254783206|sp|C3MF47|ENGB_RHISN RecName: Full=Probable GTP-binding protein EngB gi|227339666|gb|ACP23884.1| predicted GTP-binding protein EngB-related [Sinorhizobium fredii NGR234] Length = 217 Score = 240 bits (613), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 121/203 (59%), Positives = 146/203 (71%), Gaps = 8/203 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV K LARTSN PGRTQ LN+F Sbjct: 17 WIFIRGVPSMKFLPPEGPAEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYF 76 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S ++LP MALVDMPGYGYA+APK+ VD+W L+ YL RSTL+ VY+LID R Sbjct: 77 VPDGYSGEADDLPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLKRVYVLIDAR 136 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPE 187 HG+K+ D++V + LDK AVSYQIVLTK DK+ P ETL+K I+ P A+PE Sbjct: 137 HGIKKNDEEVLALLDKAAVSYQIVLTKTDKIKAAGVPRLIAETLDK----IKKRPAAYPE 192 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ TSS K GIE LR I + + Sbjct: 193 VLSTSSEKGAGIEDLRITIEQAV 215 >gi|319406773|emb|CBI80406.1| GTP-binding protein [Bartonella sp. 1-1C] Length = 213 Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 115/199 (57%), Positives = 146/199 (73%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV +KNLARTSN PGRTQ LN+F Sbjct: 14 WIFIRGVPTMKFLPPEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRTQELNYF 73 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +P F+ +NLP +A VDMPGYG+A+APK V++W LI YL R+TL+ VY+LID R Sbjct: 74 IPDGFNEQTHNLPPVAFVDMPGYGFAKAPKNLVNAWTHLIFDYLRGRTTLKRVYVLIDSR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D D + LDK AVSYQIVLTK DK+ T + + TK + +P A+PE++ T Sbjct: 134 HGIKKNDTDTLNLLDKAAVSYQIVLTKSDKIKFNTLEALITMTKTKLLKHPAAYPEILVT 193 Query: 192 SSVKRKGIEVLRKAILETI 210 S+ K G+E LR AI++ I Sbjct: 194 SAEKASGLEELRAAIIQAI 212 >gi|114706825|ref|ZP_01439725.1| GTP-binding protein [Fulvimarina pelagi HTCC2506] gi|114537773|gb|EAU40897.1| GTP-binding protein [Fulvimarina pelagi HTCC2506] Length = 217 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 111/195 (56%), Positives = 142/195 (72%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W+F+RGVP + LP GPPE+AF+GRSNVGKSSLIN L+ +K LARTSN PGRTQ LNFF Sbjct: 18 WVFVRGVPAMKFLPPEGPPEVAFAGRSNVGKSSLINALLGQKGLARTSNTPGRTQELNFF 77 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP F LP +A+VDMPGYGYA+APK+ VD+W L+ YL R TL+ V++LID R Sbjct: 78 VPDGFGGETTELPPIAIVDMPGYGYAQAPKEKVDAWTELVFDYLRGRPTLKRVFVLIDAR 137 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K D++V LDK A+SYQIVLTKIDK+ PT + + T+ IR P A+P ++ T Sbjct: 138 HGIKANDEEVLKLLDKAAMSYQIVLTKIDKIKPTGVPKLIAATEEAIRKRPAAYPGILAT 197 Query: 192 SSVKRKGIEVLRKAI 206 SS KR G++ L+ A+ Sbjct: 198 SSEKRSGLDELQAAL 212 >gi|222084725|ref|YP_002543254.1| GTP-binding protein [Agrobacterium radiobacter K84] gi|254783180|sp|B9J8E2|ENGB_AGRRK RecName: Full=Probable GTP-binding protein EngB gi|221722173|gb|ACM25329.1| GTP-binding protein [Agrobacterium radiobacter K84] Length = 219 Score = 238 bits (606), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 116/200 (58%), Positives = 142/200 (71%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV K LARTSN PGRTQ LN+F Sbjct: 17 WIFIRGVPAMKFLPPEGPLEVAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYF 76 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP FS +LP MALVDMPGYGYA APK+ VD+W L+ YL R+TL+ VY+LID R Sbjct: 77 VPDGFSGEGGDLPPMALVDMPGYGYAEAPKEQVDAWTKLVFDYLRGRTTLKRVYVLIDSR 136 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D++V + LDK AVSYQIVLTK DK+ + L T IR P A+P ++ T Sbjct: 137 HGIKKNDEEVLALLDKAAVSYQIVLTKTDKIKEAGLPKLLADTAEKIRKRPAAYPGILST 196 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K G+E +R+AI T+ Sbjct: 197 SSEKGDGLEEVRQAIRLTVG 216 >gi|153008691|ref|YP_001369906.1| ribosome biogenesis GTP-binding protein YsxC [Ochrobactrum anthropi ATCC 49188] gi|151560579|gb|ABS14077.1| GTP-binding protein HSR1-related [Ochrobactrum anthropi ATCC 49188] Length = 241 Score = 237 bits (605), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 116/201 (57%), Positives = 141/201 (70%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LVN+K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVNKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGEGLDELRAAI 234 >gi|239832646|ref|ZP_04680975.1| GTP-binding conserved hypothetical protein [Ochrobactrum intermedium LMG 3301] gi|239824913|gb|EEQ96481.1| GTP-binding conserved hypothetical protein [Ochrobactrum intermedium LMG 3301] Length = 268 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 117/205 (57%), Positives = 141/205 (68%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LVN+K LARTSN PGRT Sbjct: 60 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVNKKGLARTSNTPGRT 119 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 120 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 180 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 239 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 P +I TSS K G++ LR AI I Sbjct: 240 PGIIATSSEKGVGLDELRAAIARLI 264 >gi|260567730|ref|ZP_05838199.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str. 40] gi|260154395|gb|EEW89476.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str. 40] Length = 241 Score = 235 bits (600), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 115/201 (57%), Positives = 141/201 (70%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S+ +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSSENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGQGLDDLRAAI 234 >gi|161621072|ref|YP_001594958.1| GTPase EngB [Brucella canis ATCC 23365] gi|161337883|gb|ABX64187.1| GTP-binding conserved hypothetical protein [Brucella canis ATCC 23365] Length = 267 Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 115/201 (57%), Positives = 141/201 (70%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 60 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 119 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S+ +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 120 QELNYFVPDGYSSENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 180 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 239 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P +I TSS K +G++ LR AI Sbjct: 240 PGIIATSSEKGQGLDDLRAAI 260 >gi|17988618|ref|NP_541251.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis bv. 1 str. 16M] gi|189023103|ref|YP_001932844.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus S19] gi|254690661|ref|ZP_05153915.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 6 str. 870] gi|254696034|ref|ZP_05157862.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 3 str. Tulya] gi|254699143|ref|ZP_05160971.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 2 str. 86/8/59] gi|254700219|ref|ZP_05162047.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis bv. 5 str. 513] gi|254703340|ref|ZP_05165168.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis bv. 3 str. 686] gi|254705519|ref|ZP_05167347.1| ribosome biogenesis GTP-binding protein YsxC [Brucella pinnipedialis M163/99/10] gi|254710750|ref|ZP_05172561.1| ribosome biogenesis GTP-binding protein YsxC [Brucella pinnipedialis B2/94] gi|254720148|ref|ZP_05181959.1| ribosome biogenesis GTP-binding protein YsxC [Brucella sp. 83/13] gi|254732587|ref|ZP_05191165.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 4 str. 292] gi|256029133|ref|ZP_05442747.1| ribosome biogenesis GTP-binding protein YsxC [Brucella pinnipedialis M292/94/1] gi|256043892|ref|ZP_05446812.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis bv. 1 str. Rev.1] gi|256058816|ref|ZP_05449032.1| ribosome biogenesis GTP-binding protein YsxC [Brucella neotomae 5K33] gi|256157325|ref|ZP_05455243.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ceti M490/95/1] gi|256253697|ref|ZP_05459233.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ceti B1/94] gi|256255843|ref|ZP_05461379.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 9 str. C68] gi|260167775|ref|ZP_05754586.1| ribosome biogenesis GTP-binding protein YsxC [Brucella sp. F5/99] gi|260545088|ref|ZP_05820909.1| ATP/GTP-binding site-containing protein A [Brucella abortus NCTC 8038] gi|260565069|ref|ZP_05835554.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv. 1 str. 16M] gi|260756232|ref|ZP_05868580.1| GTPase EngB [Brucella abortus bv. 6 str. 870] gi|260760399|ref|ZP_05872747.1| GTPase EngB [Brucella abortus bv. 4 str. 292] gi|260763639|ref|ZP_05875971.1| GTPase EngB [Brucella abortus bv. 2 str. 86/8/59] gi|260882056|ref|ZP_05893670.1| GTPase EngB [Brucella abortus bv. 9 str. C68] gi|261216466|ref|ZP_05930747.1| GTPase EngB [Brucella abortus bv. 3 str. Tulya] gi|261220834|ref|ZP_05935115.1| GTPase EngB [Brucella ceti B1/94] gi|261312923|ref|ZP_05952120.1| GTPase EngB [Brucella pinnipedialis M163/99/10] gi|261318318|ref|ZP_05957515.1| GTPase EngB [Brucella pinnipedialis B2/94] gi|261322753|ref|ZP_05961950.1| GTPase EngB [Brucella neotomae 5K33] gi|261750714|ref|ZP_05994423.1| GTPase EngB [Brucella suis bv. 5 str. 513] gi|261753970|ref|ZP_05997679.1| GTPase EngB [Brucella suis bv. 3 str. 686] gi|261757212|ref|ZP_06000921.1| conserved hypothetical protein [Brucella sp. F5/99] gi|265985154|ref|ZP_06097889.1| GTPase EngB [Brucella sp. 83/13] gi|265986116|ref|ZP_06098673.1| GTPase EngB [Brucella pinnipedialis M292/94/1] gi|265990315|ref|ZP_06102872.1| GTPase EngB [Brucella melitensis bv. 1 str. Rev.1] gi|265995810|ref|ZP_06108367.1| GTPase EngB [Brucella ceti M490/95/1] gi|306839546|ref|ZP_07472353.1| GTP-binding conserved hypothetical protein [Brucella sp. NF 2653] gi|306840614|ref|ZP_07473367.1| GTP-binding conserved hypothetical protein [Brucella sp. BO2] gi|306846226|ref|ZP_07478788.1| GTP-binding conserved hypothetical protein [Brucella sp. BO1] gi|54037055|sp|P64067|ENGB_BRUSU RecName: Full=Probable GTP-binding protein EngB gi|54040978|sp|P64066|ENGB_BRUME RecName: Full=Probable GTP-binding protein EngB gi|119368793|sp|Q2YJR1|ENGB_BRUA2 RecName: Full=Probable GTP-binding protein EngB gi|119368794|sp|Q576T9|ENGB_BRUAB RecName: Full=Probable GTP-binding protein EngB gi|17984421|gb|AAL53515.1| gtp-binding protein cgpa [Brucella melitensis bv. 1 str. 16M] gi|189021677|gb|ACD74398.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19] gi|260098359|gb|EEW82233.1| ATP/GTP-binding site-containing protein A [Brucella abortus NCTC 8038] gi|260152712|gb|EEW87805.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv. 1 str. 16M] gi|260670717|gb|EEX57657.1| GTPase EngB [Brucella abortus bv. 4 str. 292] gi|260674060|gb|EEX60881.1| GTPase EngB [Brucella abortus bv. 2 str. 86/8/59] gi|260676340|gb|EEX63161.1| GTPase EngB [Brucella abortus bv. 6 str. 870] gi|260871584|gb|EEX78653.1| GTPase EngB [Brucella abortus bv. 9 str. C68] gi|260918073|gb|EEX84934.1| GTPase EngB [Brucella abortus bv. 3 str. Tulya] gi|260919418|gb|EEX86071.1| GTPase EngB [Brucella ceti B1/94] gi|261297541|gb|EEY01038.1| GTPase EngB [Brucella pinnipedialis B2/94] gi|261298733|gb|EEY02230.1| GTPase EngB [Brucella neotomae 5K33] gi|261301949|gb|EEY05446.1| GTPase EngB [Brucella pinnipedialis M163/99/10] gi|261737196|gb|EEY25192.1| conserved hypothetical protein [Brucella sp. F5/99] gi|261740467|gb|EEY28393.1| GTPase EngB [Brucella suis bv. 5 str. 513] gi|261743723|gb|EEY31649.1| GTPase EngB [Brucella suis bv. 3 str. 686] gi|262550107|gb|EEZ06268.1| GTPase EngB [Brucella ceti M490/95/1] gi|263000984|gb|EEZ13674.1| GTPase EngB [Brucella melitensis bv. 1 str. Rev.1] gi|264658313|gb|EEZ28574.1| GTPase EngB [Brucella pinnipedialis M292/94/1] gi|264663746|gb|EEZ34007.1| GTPase EngB [Brucella sp. 83/13] gi|306273477|gb|EFM55338.1| GTP-binding conserved hypothetical protein [Brucella sp. BO1] gi|306289399|gb|EFM60633.1| GTP-binding conserved hypothetical protein [Brucella sp. BO2] gi|306405378|gb|EFM61650.1| GTP-binding conserved hypothetical protein [Brucella sp. NF 2653] Length = 241 Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 115/201 (57%), Positives = 140/201 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGQGLDDLRAAI 234 >gi|23500747|ref|NP_700187.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis 1330] gi|62317853|ref|YP_223706.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 1 str. 9-941] gi|83269832|ref|YP_419123.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis biovar Abortus 2308] gi|148558302|ref|YP_001257935.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ovis ATCC 25840] gi|163845138|ref|YP_001622793.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis ATCC 23445] gi|225629473|ref|ZP_03787506.1| GTP-binding conserved hypothetical protein [Brucella ceti str. Cudo] gi|237817393|ref|ZP_04596385.1| GTP-binding conserved hypothetical protein [Brucella abortus str. 2308 A] gi|256015783|ref|YP_003105792.1| GTP-binding protein [Brucella microti CCM 4915] gi|297249211|ref|ZP_06932912.1| GTP-binding protein [Brucella abortus bv. 5 str. B3196] gi|23464401|gb|AAN34192.1| GTP-binding protein, putative [Brucella suis 1330] gi|62198046|gb|AAX76345.1| hypothetical GTP-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82940106|emb|CAJ13153.1| ATP/GTP-binding site motif A (P-loop):GTP-binding domain [Brucella melitensis biovar Abortus 2308] gi|148369587|gb|ABQ62459.1| putative GTP-binding protein [Brucella ovis ATCC 25840] gi|163675861|gb|ABY39971.1| GTP-binding conserved hypothetical protein [Brucella suis ATCC 23445] gi|225615969|gb|EEH13018.1| GTP-binding conserved hypothetical protein [Brucella ceti str. Cudo] gi|237788206|gb|EEP62422.1| GTP-binding conserved hypothetical protein [Brucella abortus str. 2308 A] gi|255998443|gb|ACU50130.1| GTP-binding protein [Brucella microti CCM 4915] gi|297173080|gb|EFH32444.1| GTP-binding protein [Brucella abortus bv. 5 str. B3196] Length = 267 Score = 235 bits (599), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 115/201 (57%), Positives = 140/201 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 60 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 119 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 120 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 180 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 239 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P +I TSS K +G++ LR AI Sbjct: 240 PGIIATSSEKGQGLDDLRAAI 260 >gi|256111043|ref|ZP_05452105.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis bv. 3 str. Ether] gi|265992578|ref|ZP_06105135.1| GTPase EngB [Brucella melitensis bv. 3 str. Ether] gi|262763448|gb|EEZ09480.1| GTPase EngB [Brucella melitensis bv. 3 str. Ether] Length = 241 Score = 235 bits (599), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 115/201 (57%), Positives = 140/201 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSGKNGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGQGLDDLRAAI 234 >gi|319405205|emb|CBI78810.1| GTP-binding protein [Bartonella sp. AR 15-3] Length = 214 Score = 234 bits (598), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 113/199 (56%), Positives = 145/199 (72%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV +KNLARTSN PGRTQ LN+F Sbjct: 15 WIFIRGVPTMKFLPPEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRTQELNYF 74 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +P F+ ++LP +ALVDMPGYG+A APK +++W LI YL R+TL+ VY+LID R Sbjct: 75 IPDGFNGQTHHLPPVALVDMPGYGFAEAPKNLINAWTHLIFDYLRGRTTLKRVYVLIDSR 134 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D D + LDK AVSYQIVLTK DK+ T + + TK + + A+PE++ T Sbjct: 135 HGIKKNDTDTLNLLDKAAVSYQIVLTKSDKIKLNTLEALIIMTKTKLLKHSAAYPEILVT 194 Query: 192 SSVKRKGIEVLRKAILETI 210 S+ K G+E LR AI++ I Sbjct: 195 SAEKASGLEELRTAIIQAI 213 >gi|319898440|ref|YP_004158533.1| GTP-binding protein [Bartonella clarridgeiae 73] gi|319402404|emb|CBI75945.1| GTP-binding protein [Bartonella clarridgeiae 73] Length = 213 Score = 234 bits (597), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 113/199 (56%), Positives = 143/199 (71%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV +KNLARTSN PGRTQ LN+F Sbjct: 14 WIFIRGVPTMKFLPAEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRTQELNYF 73 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +P F+ N P +A VDMPGYG+A APK V++W LI YL R+TL+ VY+LID R Sbjct: 74 IPDGFNGQSQNFPPIAFVDMPGYGFAEAPKHLVNAWTHLIFDYLRGRTTLKRVYVLIDSR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D + F+ LDK AVSYQIVLTK DK+ + + TK + +P A+PE++ T Sbjct: 134 HGIKKNDIETFNLLDKAAVSYQIVLTKSDKIKSDALKALIMITKTKLLKHPAAYPEILVT 193 Query: 192 SSVKRKGIEVLRKAILETI 210 S+ K G+E LR AI++ I Sbjct: 194 SAKKTFGLEELRTAIIQVI 212 >gi|256262087|ref|ZP_05464619.1| ATP/GTP-binding site domain-containing protein A [Brucella melitensis bv. 2 str. 63/9] gi|263091776|gb|EEZ16107.1| ATP/GTP-binding site domain-containing protein A [Brucella melitensis bv. 2 str. 63/9] gi|326411187|gb|ADZ68251.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis M28] gi|326554478|gb|ADZ89117.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis M5-90] Length = 241 Score = 234 bits (597), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 115/201 (57%), Positives = 140/201 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKVQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGQGLDDLRAAI 234 >gi|225686779|ref|YP_002734751.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis ATCC 23457] gi|225642884|gb|ACO02797.1| GTP-binding conserved hypothetical protein [Brucella melitensis ATCC 23457] Length = 267 Score = 234 bits (597), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 115/201 (57%), Positives = 140/201 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 60 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 119 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 120 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKVQVDAWTRLVFDYLRGRTTLKRVY 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 180 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 239 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P +I TSS K +G++ LR AI Sbjct: 240 PGIIATSSEKGQGLDDLRAAI 260 >gi|254712780|ref|ZP_05174591.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ceti M644/93/1] gi|254715849|ref|ZP_05177660.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ceti M13/05/1] gi|261217610|ref|ZP_05931891.1| GTPase EngB [Brucella ceti M13/05/1] gi|261320487|ref|ZP_05959684.1| GTPase EngB [Brucella ceti M644/93/1] gi|260922699|gb|EEX89267.1| GTPase EngB [Brucella ceti M13/05/1] gi|261293177|gb|EEX96673.1| GTPase EngB [Brucella ceti M644/93/1] Length = 241 Score = 234 bits (596), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 114/201 (56%), Positives = 140/201 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTK+DK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKLDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGQGLDDLRAAI 234 >gi|294853977|ref|ZP_06794649.1| GTP-binding protein [Brucella sp. NVSL 07-0026] gi|294819632|gb|EFG36632.1| GTP-binding protein [Brucella sp. NVSL 07-0026] Length = 267 Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 114/201 (56%), Positives = 139/201 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 60 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 119 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGY +A APK VD+W L+ YL R+TL+ VY Sbjct: 120 QELNYFVPDGYSGENGDLPPLALVDMPGYSFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 180 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 239 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P +I TSS K +G++ LR AI Sbjct: 240 PGIIATSSEKGQGLDDLRAAI 260 >gi|90419895|ref|ZP_01227804.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90335936|gb|EAS49684.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 226 Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 110/200 (55%), Positives = 141/200 (70%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F W+F+RGVP + LP GPPEIAF+GRSNVGKSSLIN L+ +K LARTSN PGRTQ Sbjct: 22 FFGQPWVFVRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALLAQKGLARTSNTPGRTQ 81 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNFFVP + LP +A+VDMPGYGYA+APK +VD+W L+ YL R++L+ V+L Sbjct: 82 ELNFFVPDGYGGETAELPPIAVVDMPGYGYAKAPKDHVDAWTKLVFSYLRGRASLKRVFL 141 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID RHG+K+ D++V LDK AVSYQIVLTK DK+ T + +E T I+ +P A P Sbjct: 142 LIDARHGIKKNDEEVMGLLDKAAVSYQIVLTKTDKIKATGVPKLIEATALGIKRHPAAFP 201 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 ++ TSS K G++ L+ I Sbjct: 202 RILSTSSEKGVGLDELKAEI 221 >gi|86356093|ref|YP_467985.1| GTPase EngB [Rhizobium etli CFN 42] gi|119369241|sp|Q2KD28|ENGB_RHIEC RecName: Full=Probable GTP-binding protein EngB gi|86280195|gb|ABC89258.1| GTP-binding protein [Rhizobium etli CFN 42] Length = 217 Score = 228 bits (581), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 116/200 (58%), Positives = 145/200 (72%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GPPE+AF+GRSNVGKSSLIN LV++K LARTSN PGRTQ LN+F Sbjct: 13 WIFIRGVPSLNFLPPEGPPEVAFAGRSNVGKSSLINALVSQKGLARTSNTPGRTQELNYF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ VY+LID R Sbjct: 73 VPDGYSGEAGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D DV LDK AVSYQ+VLTK DK+ + L +T IR P A+P ++ T Sbjct: 133 HGIKKNDDDVLDLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRPAAYPYLLST 192 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K G++ LR+AI ET+ Sbjct: 193 SSEKGDGLDELRQAIAETVG 212 >gi|209547691|ref|YP_002279608.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238058987|sp|B5ZN41|ENGB_RHILW RecName: Full=Probable GTP-binding protein EngB gi|209533447|gb|ACI53382.1| GTP-binding protein HSR1-related [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 217 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 116/200 (58%), Positives = 143/200 (71%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 13 WIFIRGVPSLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S ++P MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ VY+LID R Sbjct: 73 VPDGYSGESGDMPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D DV LDK AVSYQIVLTK DK+ + L +T IR P A+P V+ T Sbjct: 133 HGIKKNDDDVLDLLDKAAVSYQIVLTKTDKIKAPAVPKLLAETAEKIRKRPAAYPGVLST 192 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K G++ LR+AI ET+ Sbjct: 193 SSEKGDGLDDLRQAIGETVG 212 >gi|116250221|ref|YP_766059.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium leguminosarum bv. viciae 3841] gi|119369242|sp|Q1MM59|ENGB_RHIL3 RecName: Full=Probable GTP-binding protein EngB gi|115254869|emb|CAK05943.1| putative GTP-binding protein [Rhizobium leguminosarum bv. viciae 3841] Length = 217 Score = 224 bits (570), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 116/200 (58%), Positives = 142/200 (71%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 13 WIFIRGVPSLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S +LP A+VDMPGYGYA+APK+ VD W L+ YL R+TL+ VY+LID R Sbjct: 73 VPDGYSGEGGDLPPTAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D DV LDK AVSYQIVLTK DK+ + L +T IR P A+P V+ T Sbjct: 133 HGIKKNDDDVLDLLDKAAVSYQIVLTKTDKIKAAGVPKLLAETAEKIRKRPAAYPGVLST 192 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K G++ LR+AI ET+ Sbjct: 193 SSEKGDGLDELRQAIAETVG 212 >gi|241202848|ref|YP_002973944.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856738|gb|ACS54405.1| GTP-binding protein HSR1-related [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 217 Score = 224 bits (570), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 116/200 (58%), Positives = 142/200 (71%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 13 WIFIRGVPSLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S +LP A+VDMPGYGYA+APK+ VD W L+ YL R+TL+ VY+LID R Sbjct: 73 VPDGYSGEGQDLPPTAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D DV LDK AVSYQIVLTK DK+ + L +T IR P A+P V+ T Sbjct: 133 HGIKKNDDDVLDLLDKAAVSYQIVLTKTDKIKAAGVPKLLAETAEKIRKRPAAYPGVLST 192 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K G++ LR+AI ET+ Sbjct: 193 SSEKGDGLDELRQAIAETVG 212 >gi|304392401|ref|ZP_07374342.1| ribosome biogenesis GTP-binding protein YsxC [Ahrensia sp. R2A130] gi|303295505|gb|EFL89864.1| ribosome biogenesis GTP-binding protein YsxC [Ahrensia sp. R2A130] Length = 233 Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 115/204 (56%), Positives = 139/204 (68%), Gaps = 10/204 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+RGVP + LP+ GPPEIAF+GRSNVGKSSLIN L K LARTSN PGRTQ LNFF Sbjct: 35 WQFVRGVPAMKFLPEEGPPEIAFAGRSNVGKSSLINALTATKGLARTSNTPGRTQELNFF 94 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 P + ++ LP +ALVDMPGYG+A+APK VD+W LI YL R+TL+ VY+LID R Sbjct: 95 TPD--AEFEDGLPPIALVDMPGYGFAKAPKDAVDAWTKLIFSYLRGRTTLKRVYVLIDAR 152 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT----AQETLEKTKYLIRNYPTAHPE 187 HGVK+ D++VF LDK AVSYQ+VLTK DK+ P ETLEK I A P Sbjct: 153 HGVKKNDEEVFDLLDKAAVSYQLVLTKADKIKPPALVKLQAETLEK----IAKRAAAFPF 208 Query: 188 VIPTSSVKRKGIEVLRKAILETIN 211 ++ TSS K G++ L+ IL I Sbjct: 209 IVSTSSEKGHGVDDLKGQILYAIE 232 >gi|218679046|ref|ZP_03526943.1| GTPase EngB [Rhizobium etli CIAT 894] Length = 185 Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 104/180 (57%), Positives = 129/180 (71%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+FVP +S +LP A+VDM Sbjct: 1 MAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGEGGDLPPTAIVDM 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYGYA+APK+ VD W L+ YL R+TL+ VY+LID RHG+K+ D+DV LDK AVS Sbjct: 61 PGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEDVLDLLDKAAVS 120 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 YQIVLTK DK+ + L +T IR P A+P V+ TSS K G++ LR+AI ET+ Sbjct: 121 YQIVLTKTDKIKAAGVPKLLAETAERIRKRPAAYPAVLSTSSEKGDGMDELRQAIAETVG 180 >gi|319408961|emb|CBI82618.1| GTP-binding protein [Bartonella schoenbuchensis R1] Length = 181 Score = 207 bits (528), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 98/164 (59%), Positives = 120/164 (73%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+R VP I LP GPPEIAF GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 15 WIFIRSVPTIQCLPPEGPPEIAFVGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYF 74 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +P++ S+ K + P +ALVDMPGYG+A+AP +++W LI YL R+TL+ Y+LID R Sbjct: 75 IPENLSDQKEDFPPIALVDMPGYGFAKAPPSCIEAWTRLIFDYLRGRTTLKRAYVLIDSR 134 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 HG+K+ D DV LDK AVSYQIVLTK DK+ P + + TK Sbjct: 135 HGIKKNDTDVLDLLDKAAVSYQIVLTKSDKIKPNALETLVTATK 178 >gi|254473683|ref|ZP_05087078.1| GTP-binding protein [Pseudovibrio sp. JE062] gi|211957069|gb|EEA92274.1| GTP-binding protein [Pseudovibrio sp. JE062] Length = 216 Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 110/201 (54%), Positives = 130/201 (64%), Gaps = 8/201 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ V E+ LP EIAF+GRSNVGKSSLIN L +K LARTSN PGRTQ LNFF Sbjct: 23 WEFITSVKEMHQLPVLDGIEIAFAGRSNVGKSSLINKLTGKKALARTSNTPGRTQMLNFF 82 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + S LK +VDMPGYGYA APK VD+W LI YL RSTLR V+ LID R Sbjct: 83 -GAEHSMLK-------IVDMPGYGYAEAPKGMVDAWTSLIFDYLRGRSTLRRVFSLIDSR 134 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D D + LDK AV YQ+VLTK DKL P Q E+T ++ P AHPEVI T Sbjct: 135 HGIKKNDLDAMAILDKAAVPYQVVLTKADKLKPGQLQRMKEETLKVLAKRPAAHPEVIAT 194 Query: 192 SSVKRKGIEVLRKAILETINY 212 SS K G++ LR I + ++Y Sbjct: 195 SSEKGLGMDDLRAEIAQLVSY 215 >gi|328545252|ref|YP_004305361.1| GTPase EngB [polymorphum gilvum SL003B-26A1] gi|326414994|gb|ADZ72057.1| GTPase EngB [Polymorphum gilvum SL003B-26A1] Length = 218 Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 106/200 (53%), Positives = 124/200 (62%), Gaps = 8/200 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL V +I LP G EIAF+GRSNVGKSSLIN L +K LARTSN PGRTQ LNFF Sbjct: 23 WRFLTSVADIRQLPDIGSLEIAFAGRSNVGKSSLINALTGQKALARTSNTPGRTQMLNFF 82 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + A+ +VDMPGYGYA APK VD+W LI YL R TLR V+LLID R Sbjct: 83 GAEG--------AAVTIVDMPGYGYAEAPKGMVDAWTDLIFAYLRGRPTLRRVFLLIDSR 134 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K D + LDK AV YQ+VLTK DK+ P + T + P AHPE++ T Sbjct: 135 HGLKSNDLEAMQLLDKAAVVYQVVLTKADKIKPGQLDRLVVDTAKALAKRPAAHPEILVT 194 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K GI+ LR AI +N Sbjct: 195 SSEKNTGIDSLRAAIAVLVN 214 >gi|218509358|ref|ZP_03507236.1| GTPase EngB [Rhizobium etli Brasil 5] Length = 175 Score = 195 bits (496), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 95/170 (55%), Positives = 121/170 (71%) Query: 42 KSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPK 101 KSSLIN LV +K LARTSN PGRTQ LN+FVP +S +LP MA+VDMPGYGYA+APK Sbjct: 1 KSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGEGGDLPPMAIVDMPGYGYAQAPK 60 Query: 102 KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 + VD W L+ YL R+TL+ VY+LID RHG+K+ D+DV + LDK AVSYQ+VLTK DK Sbjct: 61 EQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEDVLTLLDKAAVSYQLVLTKTDK 120 Query: 162 LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + + L +T IR P A+P V+ TSS K G++ LR+AI +T+ Sbjct: 121 IKAPAVPKLLAETADKIRKRPAAYPAVLSTSSEKGDGLDDLRQAIAQTVG 170 >gi|118589751|ref|ZP_01547156.1| GTP-binding protein [Stappia aggregata IAM 12614] gi|118437837|gb|EAV44473.1| GTP-binding protein [Stappia aggregata IAM 12614] Length = 215 Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 98/196 (50%), Positives = 128/196 (65%), Gaps = 8/196 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL V ++ LP+A EIAF+GRSNVGKSSLIN L RK+LARTS PGRTQ LNFF Sbjct: 23 WDFLTSVTDMANLPEAAGAEIAFAGRSNVGKSSLINALTGRKDLARTSATPGRTQMLNFF 82 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + + + +VDMPGYGYA+APK+ V++W L+ YL R LR V LLID R Sbjct: 83 IAPE--------TPLTIVDMPGYGYAQAPKELVEAWTKLVFSYLRGRPNLRRVILLIDSR 134 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D + LDK AV YQ+VLTK DK+ P +E+T+ ++R AHPE++ T Sbjct: 135 HGIKKNDLEAMELLDKAAVVYQVVLTKSDKIKPPQLVRLIEETQAILRKRVAAHPEILAT 194 Query: 192 SSVKRKGIEVLRKAIL 207 SS K +G++ LR + Sbjct: 195 SSEKNRGVDELRAELF 210 >gi|94495880|ref|ZP_01302459.1| GTP-binding protein [Sphingomonas sp. SKA58] gi|94424572|gb|EAT09594.1| GTP-binding protein [Sphingomonas sp. SKA58] Length = 215 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 98/197 (49%), Positives = 124/197 (62%), Gaps = 7/197 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P++ LP E+AF+GRSNVGKSSL+N L NR LARTSN PGRTQ LNFF Sbjct: 23 FLKSAPDLKFLPDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFFDV 82 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVDMPGYGYA+APK V W L+ YL R+ L+ +LID RHG Sbjct: 83 GDPLRFR-------LVDMPGYGYAKAPKDMVKKWRFLVNDYLRGRAALKRTLVLIDSRHG 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D D+ LD AVSY+IVLTK DK+ + ++T IR P AHP++I TSS Sbjct: 136 IKDVDTDMLDMLDGAAVSYRIVLTKADKIKASALAAVTQQTADAIRKRPAAHPDIIATSS 195 Query: 194 VKRKGIEVLRKAILETI 210 K G+ LR A+LE++ Sbjct: 196 EKGMGLPELRAAVLESV 212 >gi|154250754|ref|YP_001411578.1| ribosome biogenesis GTP-binding protein YsxC [Parvibaculum lavamentivorans DS-1] gi|154154704|gb|ABS61921.1| GTP-binding protein HSR1-related [Parvibaculum lavamentivorans DS-1] Length = 235 Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 102/193 (52%), Positives = 122/193 (63%), Gaps = 5/193 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+RGV + LP E+AF+GRSNVGKSSLIN L RK LARTSN PGRT+ LNFF Sbjct: 33 FVRGVVAMDGLPSTTITEVAFAGRSNVGKSSLINALTGRKTLARTSNTPGRTKELNFFAL 92 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N PA+ LVD+PGYGYAR + VD W LI+ YL R LR V +LID RHG Sbjct: 93 GTSGN-----PAIMLVDLPGYGYARETRTRVDQWTDLIMAYLRGRVPLRRVLVLIDARHG 147 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D V + LD+ AVSYQIVLTKIDKL + L++ + IR + AHP ++ TSS Sbjct: 148 LKDNDHSVMTLLDEAAVSYQIVLTKIDKLKAGELETRLDEVRAGIRRHVAAHPRIVATSS 207 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 208 EKGTGIAELRAEI 220 >gi|332186237|ref|ZP_08387982.1| ribosome biogenesis GTP-binding protein YsxC [Sphingomonas sp. S17] gi|332013605|gb|EGI55665.1| ribosome biogenesis GTP-binding protein YsxC [Sphingomonas sp. S17] Length = 224 Score = 192 bits (488), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 98/198 (49%), Positives = 126/198 (63%), Gaps = 7/198 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P + LP PEIA +GRSNVGKSSL+N L NR LARTSN PGRTQ LNFF Sbjct: 34 FLKSAPALKFLPDPIVPEIAVAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFF-- 91 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D N P + LVDMPGYG+A+APK V W L+ +L R L+ +LID RHG Sbjct: 92 -DV----GNPPTLRLVDMPGYGFAKAPKDMVKQWRFLVNDFLRGRQALKRALVLIDSRHG 146 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D+++ LD+ AVSY+IVLTK DK+ T + + +T+ R P AHP+++ TSS Sbjct: 147 IKEVDREILEMLDRAAVSYRIVLTKADKVKATELADVVARTEVEARKRPAAHPDILATSS 206 Query: 194 VKRKGIEVLRKAILETIN 211 GI LR A+LE I Sbjct: 207 EGGMGIAELRAAVLEAIG 224 >gi|307294061|ref|ZP_07573905.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobium chlorophenolicum L-1] gi|306880212|gb|EFN11429.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobium chlorophenolicum L-1] Length = 215 Score = 192 bits (487), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 98/197 (49%), Positives = 123/197 (62%), Gaps = 7/197 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P++ LP E+AF+GRSNVGKSSL+N L NR LARTSN PGRTQ LNFF Sbjct: 23 FLKSAPDLKFLPDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFFDV 82 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVDMPGYGYA+APK V W L+ YL R+ L+ +LID RHG Sbjct: 83 GDPLRFR-------LVDMPGYGYAKAPKDMVRKWRFLVNDYLRGRAKLKRTLVLIDSRHG 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D D+ LD AVSY+IVLTK DK+ + E + IR P AHP++I TSS Sbjct: 136 IKDVDTDILDMLDAAAVSYRIVLTKADKVKASHLAEVKQAVAEAIRKRPAAHPDIIATSS 195 Query: 194 VKRKGIEVLRKAILETI 210 K G+ LR A+LE++ Sbjct: 196 EKGMGLPELRAAVLESV 212 >gi|294675900|ref|YP_003576515.1| GTP-binding protein EngB [Rhodobacter capsulatus SB 1003] gi|294474720|gb|ADE84108.1| GTP-binding protein EngB [Rhodobacter capsulatus SB 1003] Length = 216 Score = 192 bits (487), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 97/199 (48%), Positives = 129/199 (64%), Gaps = 10/199 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+GV + LP A E+ F+GRSNVGKSSLIN L RKNLAR SN PGRTQ +NFF Sbjct: 28 LFLKGVVAMAGLPPADRIEVCFAGRSNVGKSSLINALTGRKNLARASNTPGRTQEINFFT 87 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYG+A AP V W L+ YLS R+TLR ++LID RH Sbjct: 88 TEG---------GPYLVDLPGYGFAEAPVAIVKKWQALLKSYLSGRATLRRAFVLIDARH 138 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 GVK +D+++ LD+ AV++Q VLTK DK+S + +E+ K + +P A+PE++ TS Sbjct: 139 GVKAVDEEILQLLDRSAVTFQAVLTKADKISKAELERVIEQVKGALAKHPAAYPEIVVTS 198 Query: 193 SVKRKGIEVLRKAILETIN 211 S K +GIE LR AI+ T+ Sbjct: 199 SEKGEGIETLR-AIIATLE 216 >gi|294010744|ref|YP_003544204.1| GTP-binding protein [Sphingobium japonicum UT26S] gi|292674074|dbj|BAI95592.1| GTP-binding protein [Sphingobium japonicum UT26S] Length = 215 Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 98/197 (49%), Positives = 122/197 (61%), Gaps = 7/197 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P++ LP E+AF+GRSNVGKSSL+N L NR LARTSN PGRTQ LNFF Sbjct: 23 FLKSAPDLKFLPDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFFDV 82 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVDMPGYGYA+APK V W L+ YL R+ L+ +LID RHG Sbjct: 83 GDPLRFR-------LVDMPGYGYAKAPKDMVRKWRFLVNDYLRGRAKLKRTLVLIDSRHG 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D D+ LD AVSY+IVLTK DK+ + E IR P AHP++I TSS Sbjct: 136 IKDVDTDILDMLDAAAVSYRIVLTKADKVKASHLAEVRHSVTEAIRKRPAAHPDIIATSS 195 Query: 194 VKRKGIEVLRKAILETI 210 K G+ LR A+LE++ Sbjct: 196 EKGMGLPELRAAVLESV 212 >gi|312113265|ref|YP_004010861.1| ribosome biogenesis GTP-binding protein YsxC [Rhodomicrobium vannielii ATCC 17100] gi|311218394|gb|ADP69762.1| ribosome biogenesis GTP-binding protein YsxC [Rhodomicrobium vannielii ATCC 17100] Length = 214 Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 99/195 (50%), Positives = 129/195 (66%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ GV ++ LP+ PE+AF+GRSNVGKSSL+N L++R+NLAR SN PGRT+ +N+F Sbjct: 27 FVLGVTDVAALPEGNRPEVAFAGRSNVGKSSLLNALLSRRNLARVSNTPGRTREVNYFSV 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D A+ +VDMPGYGYA+APK V W LI YL R L+ V LLID RHG Sbjct: 87 GD---------ALYVVDMPGYGYAKAPKALVKGWTQLIHDYLRGRPQLKRVMLLIDSRHG 137 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+++ + LDK AVSYQ VLTK DK + + +T+ ++R +P AHP V+ TSS Sbjct: 138 LKPSDKEIMTLLDKAAVSYQGVLTKADKPKAGDLGQVVRETEAVMRTHPAAHPVVLTTSS 197 Query: 194 VKRKGIEVLRKAILE 208 V GIE LR AI E Sbjct: 198 VDGAGIEELRTAIAE 212 >gi|254501660|ref|ZP_05113811.1| small GTP-binding protein domain, putative [Labrenzia alexandrii DFL-11] gi|222437731|gb|EEE44410.1| small GTP-binding protein domain, putative [Labrenzia alexandrii DFL-11] Length = 215 Score = 191 bits (484), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 99/195 (50%), Positives = 124/195 (63%), Gaps = 8/195 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL V ++ LP A EIAF+GRSNVGKSSLIN L RK LARTS+ PGRTQ LNFF Sbjct: 23 WDFLTSVTDMANLPPAAGTEIAFAGRSNVGKSSLINALTGRKGLARTSSTPGRTQMLNFF 82 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 V + + +VDMPGYGYA+APK+ V++W L+ YL R LR V LLID R Sbjct: 83 VAPE--------TPLTIVDMPGYGYAQAPKELVEAWTNLVFSYLRGRPNLRRVILLIDSR 134 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D + LDK AV YQ+VLTK DK+ P +++TK AHPE+I T Sbjct: 135 HGIKKNDLEAMELLDKAAVVYQVVLTKADKIKPPALVRLIDETKAASAKRVAAHPEIIAT 194 Query: 192 SSVKRKGIEVLRKAI 206 SS K +G++ LR + Sbjct: 195 SSEKNRGVDELRAEL 209 >gi|90422336|ref|YP_530706.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris BisB18] gi|119369245|sp|Q21B49|ENGB_RHOPB RecName: Full=Probable GTP-binding protein EngB gi|90104350|gb|ABD86387.1| GTP-binding [Rhodopseudomonas palustris BisB18] Length = 216 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 99/199 (49%), Positives = 127/199 (63%), Gaps = 7/199 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTS+ PGRTQ L FF Sbjct: 21 WQFIWASPSIETLPPMAGLEVAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFF 80 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + +N + LVDMPGYGYA APK + SW LI +L RSTL VY+LID R Sbjct: 81 EGPENANFR-------LVDMPGYGYASAPKAKIASWTSLIHNFLQGRSTLARVYVLIDAR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K++DQDV + LDK AVSYQ+VLTK D++ P + + +R +P A+PE++ T Sbjct: 134 HGLKEVDQDVLNTLDKSAVSYQVVLTKADQVKPAELAQCRIDVEAGLRKHPAAYPELLVT 193 Query: 192 SSVKRKGIEVLRKAILETI 210 SS G+ LR A+++ I Sbjct: 194 SSRTGAGMPELRAAMIKLI 212 >gi|148556520|ref|YP_001264102.1| ribosome biogenesis GTP-binding protein YsxC [Sphingomonas wittichii RW1] gi|148501710|gb|ABQ69964.1| GTP-binding protein, HSR1-related [Sphingomonas wittichii RW1] Length = 220 Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 96/197 (48%), Positives = 127/197 (64%), Gaps = 2/197 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P++ LP PE+AF+GRSNVGKSSL+N L NR LARTSN PGRTQ LNFF Sbjct: 24 FLKSAPDLRYLPDPVAPEVAFAGRSNVGKSSLLNRLTNRVGLARTSNTPGRTQELNFF-- 81 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + +PA+ LVDMPGYG+A+APK V W ++ YL R LR +LID RHG Sbjct: 82 DVGADEEGGVPALRLVDMPGYGFAKAPKDIVRKWRHVVNDYLRGRVVLRRALVLIDSRHG 141 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ LDK AV+Y +VLTK DK+ + E+T R + AHP ++ TSS Sbjct: 142 IKDVDREIMEMLDKAAVTYHLVLTKADKIKASELAAVTERTAAEARTHVAAHPRLLVTSS 201 Query: 194 VKRKGIEVLRKAILETI 210 K G+ LR AIL+ I Sbjct: 202 EKDMGMAELRAAILDAI 218 >gi|103485501|ref|YP_615062.1| ribosome biogenesis GTP-binding protein YsxC [Sphingopyxis alaskensis RB2256] gi|119369262|sp|Q1GN74|ENGB_SPHAL RecName: Full=Probable GTP-binding protein EngB gi|98975578|gb|ABF51729.1| GTP-binding [Sphingopyxis alaskensis RB2256] Length = 219 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 101/198 (51%), Positives = 122/198 (61%), Gaps = 7/198 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P + LP PEIAF+GRSNVGKSSL+N L NR LARTS PGRTQ LN+F Sbjct: 28 FLKSAPALQHLPVPSVPEIAFAGRSNVGKSSLLNALTNRNGLARTSVTPGRTQELNYF-- 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D P LVDMPGYG+A+APK V W LI YL R L+ +LID RHG Sbjct: 86 -DV----GEPPVFRLVDMPGYGFAKAPKDVVRKWRFLINDYLRGRQVLKRTLVLIDSRHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+DV LD AVSY++VLTK DK+ + + T+ R +P AHPEVI TSS Sbjct: 141 IKDVDRDVLEMLDTAAVSYRLVLTKADKIKASALADVHAATEAEARKHPAAHPEVIATSS 200 Query: 194 VKRKGIEVLRKAILETIN 211 K GI LR A+LE + Sbjct: 201 EKGMGIAELRTAVLEAVE 218 >gi|146337895|ref|YP_001202943.1| ribosome biogenesis GTP-binding protein YsxC [Bradyrhizobium sp. ORS278] gi|146190701|emb|CAL74705.1| putative GTP-binding protein engB [Bradyrhizobium sp. ORS278] Length = 219 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 97/201 (48%), Positives = 127/201 (63%), Gaps = 7/201 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 AW F P I LP GP EIAF+GRSNVGKSSLIN L + LARTS+ PGRTQ L F Sbjct: 22 AWRFTHASPSIASLPPMGPIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGRTQELIF 81 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F D + L+ LVDMPGYGYA A K V SW LI ++L R++L VY+LID Sbjct: 82 FQGPDSAPLR-------LVDMPGYGYAAAAKTKVASWTELIHQFLLGRASLARVYVLIDA 134 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RHG+K++DQ++ LD+ AVSYQ+VLTK D++ P + +T+ + +P A P+V+ Sbjct: 135 RHGLKEVDQEILKTLDRSAVSYQLVLTKADQIKPAELASRIAETETALAKHPAAFPQVLA 194 Query: 191 TSSVKRKGIEVLRKAILETIN 211 TSS G+ LR A++ + Sbjct: 195 TSSRSGTGMPELRAAMVRLLE 215 >gi|218658399|ref|ZP_03514329.1| GTPase EngB [Rhizobium etli IE4771] Length = 173 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 86/136 (63%), Positives = 105/136 (77%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 13 WIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 VP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ VY+LID R Sbjct: 73 VPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSR 132 Query: 132 HGVKQIDQDVFSFLDK 147 HG+K+ D+DV + LDK Sbjct: 133 HGIKKNDEDVLTLLDK 148 >gi|115522672|ref|YP_779583.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris BisA53] gi|123026147|sp|Q07TY1|ENGB_RHOP5 RecName: Full=Probable GTP-binding protein EngB gi|115516619|gb|ABJ04603.1| GTP-binding protein [Rhodopseudomonas palustris BisA53] Length = 216 Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 99/200 (49%), Positives = 124/200 (62%), Gaps = 9/200 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P + LP E+AF+GRSNVGKSSLIN L R LARTS+ PGRTQ L FF Sbjct: 21 WQFIWASPSVETLPPMQGLEVAFAGRSNVGKSSLINALTGRNGLARTSHTPGRTQELIFF 80 Query: 72 V-PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 P D LVDMPGYGYA APK + SW LI ++L R+TL VY+LID Sbjct: 81 EGPAD--------AGFRLVDMPGYGYAAAPKTKIASWTKLIHQFLQGRATLVRVYVLIDA 132 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RHG+K +D +V + LDK AVSYQIVLTK D++ P E + T +R +P A PE++ Sbjct: 133 RHGIKDVDNEVLTTLDKSAVSYQIVLTKADQVKPAELAERVAATTEALRKHPAAFPEIVV 192 Query: 191 TSSVKRKGIEVLRKAILETI 210 TSS G+ LR AI++ + Sbjct: 193 TSSRNASGMPELRAAIIKLV 212 >gi|241762237|ref|ZP_04760319.1| GTP-binding protein HSR1-related [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373284|gb|EER62903.1| GTP-binding protein HSR1-related [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 212 Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 97/197 (49%), Positives = 125/197 (63%), Gaps = 7/197 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P + LP PE+AF+GRSNVGKSSLIN L NR +LAR S PGRTQ LNFF Sbjct: 22 FLKSAPALEFLPAPTAPEVAFAGRSNVGKSSLINALTNRNSLARASTTPGRTQELNFF-- 79 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ L M LVDMPGYG+A+APK V W LI YL R+ LR +LID RHG Sbjct: 80 ----DVGEPL-QMRLVDMPGYGFAKAPKDVVKRWKWLINDYLRGRAVLRRSLILIDSRHG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+D+ LD A+SY++VLTK DK+ ++T++ +R +P A PE+I TSS Sbjct: 135 IKDVDRDLMKMLDDAAISYRVVLTKSDKIKAAELEKTVKAITEEMRKHPAAFPEIIATSS 194 Query: 194 VKRKGIEVLRKAILETI 210 K GI LR A+ + I Sbjct: 195 EKGTGIAELRAAVYDAI 211 >gi|56552523|ref|YP_163362.1| ribosome biogenesis GTP-binding protein YsxC [Zymomonas mobilis subsp. mobilis ZM4] gi|260753816|ref|YP_003226709.1| ribosome biogenesis GTP-binding protein YsxC [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|13124231|sp|Q9RNL6|ENGB_ZYMMO RecName: Full=GTP-binding protein EngB; AltName: Full=GTP-binding protein CgpA gi|5932358|gb|AAD56911.1|AF180145_3 GTP-binding protein CgpA [Zymomonas mobilis subsp. mobilis ZM4] gi|56544097|gb|AAV90251.1| GTP-binding protein HSR1-related protein [Zymomonas mobilis subsp. mobilis ZM4] gi|258553179|gb|ACV76125.1| GTP-binding protein HSR1-related [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 212 Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 97/197 (49%), Positives = 125/197 (63%), Gaps = 7/197 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P + LP PE+AF+GRSNVGKSSLIN L NR +LAR S PGRTQ LNFF Sbjct: 22 FLKSAPALEFLPAPTAPEVAFAGRSNVGKSSLINALTNRNSLARASTTPGRTQELNFF-- 79 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ L M LVDMPGYG+A+APK V W LI YL R+ LR +LID RHG Sbjct: 80 ----DVGEPL-QMRLVDMPGYGFAKAPKDVVKRWKWLINDYLRGRAVLRRSLILIDSRHG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+D+ LD A+SY++VLTK DK+ ++T++ +R +P A PE+I TSS Sbjct: 135 IKDVDRDLMKMLDDAAISYRVVLTKSDKIKAVELEKTVKAITEEMRKHPAAFPEIIATSS 194 Query: 194 VKRKGIEVLRKAILETI 210 K GI LR A+ + I Sbjct: 195 EKGTGIAELRAAVYDAI 211 >gi|126734529|ref|ZP_01750275.1| GTP-binding protein [Roseobacter sp. CCS2] gi|126715084|gb|EBA11949.1| GTP-binding protein [Roseobacter sp. CCS2] Length = 215 Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 93/193 (48%), Positives = 125/193 (64%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN + RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMDGLPPADRVEVCFAGRSNVGKSSLINAITGRKGLARASNTPGRTQEINFFTA 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A AP V+ W L+ +YL R TLR V++LID RHG Sbjct: 89 GD----------IYVVDLPGYGFATAPVAVVEKWQRLLKQYLQGRQTLRRVFVLIDARHG 138 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K +D+++ S LD AV++Q+V+TK+DKL Q +L+KT+ + +P A PE+I TSS Sbjct: 139 AKAVDEEIMSLLDSSAVTFQVVMTKVDKLKGEALQASLDKTRAALAKHPAAFPELILTSS 198 Query: 194 VKRKGIEVLRKAI 206 K GI+ LR I Sbjct: 199 EKGDGIKTLRAII 211 >gi|300024924|ref|YP_003757535.1| ribosome biogenesis GTP-binding protein YsxC [Hyphomicrobium denitrificans ATCC 51888] gi|299526745|gb|ADJ25214.1| ribosome biogenesis GTP-binding protein YsxC [Hyphomicrobium denitrificans ATCC 51888] Length = 221 Score = 187 bits (475), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 96/206 (46%), Positives = 128/206 (62%), Gaps = 9/206 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +FT+ AW F RG P + LP PEIAF+GRSNVGKSSLIN LV ++ LAR SN PGRT Sbjct: 21 LFTR-AWTFSRGSPGLDHLPPDDRPEIAFAGRSNVGKSSLINALVGQRTLARASNTPGRT 79 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF + + LVDMPGYG+A APK V +W + +L+ R TL V+ Sbjct: 80 QELNFFTDPNAD--------LYLVDMPGYGFAEAPKDKVAAWNKTLRSFLAGRRTLLRVF 131 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +L+D RHG+K +D ++ + LD AVSYQ++LTK DK+S T + T + +P A+ Sbjct: 132 VLVDARHGLKPVDDEIMALLDGAAVSYQVLLTKADKISRTDLERVTANTTKSLAKHPAAY 191 Query: 186 PEVIPTSSVKRKGIEVLRKAILETIN 211 P V+ TSS G E LR + + I+ Sbjct: 192 PRVLATSSETGMGFEDLRAVVAKLID 217 >gi|299132594|ref|ZP_07025789.1| ribosome biogenesis GTP-binding protein YsxC [Afipia sp. 1NLS2] gi|298592731|gb|EFI52931.1| ribosome biogenesis GTP-binding protein YsxC [Afipia sp. 1NLS2] Length = 221 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 100/199 (50%), Positives = 122/199 (61%), Gaps = 2/199 (1%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F P I LP EIAF+GRSNVGKSSLIN L NR LARTS+ PGRTQ L FF Sbjct: 21 WQFFWASPSIETLPTMQGVEIAFAGRSNVGKSSLINALTNRNGLARTSHTPGRTQELIFF 80 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 K L P + LVDMPGYGYA APK + SW LI +L R+ L VY+LID R Sbjct: 81 --KGPGPLDARTPELRLVDMPGYGYASAPKTQIASWTKLIHNFLLGRANLARVYVLIDSR 138 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG K D +V + LDK AVSYQIVLTK D++ +ET+ +R +P A PE++ T Sbjct: 139 HGFKDADNEVLTTLDKAAVSYQIVLTKADQVKKAALEETMAAMAEKLRKHPAAFPEMLVT 198 Query: 192 SSVKRKGIEVLRKAILETI 210 SS G+ +R AI++ + Sbjct: 199 SSRDGGGMAEMRAAIVKLL 217 >gi|310816970|ref|YP_003964934.1| GTP-binding protein HSR1-related protein [Ketogulonicigenium vulgare Y25] gi|308755705|gb|ADO43634.1| GTP-binding protein HSR1-related protein [Ketogulonicigenium vulgare Y25] Length = 216 Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 96/193 (49%), Positives = 123/193 (63%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A EI F+GRSNVGKSSLIN L RK+LAR SN PGRTQ LNFF Sbjct: 29 FVKGVVAMSGLPPADRVEICFAGRSNVGKSSLINALTGRKSLARASNTPGRTQELNFFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA AP V+ W L+ YLS R TLR ++LID RHG Sbjct: 89 GE---------DRYMVDLPGYGYANAPLAVVEKWQKLLKSYLSGRQTLRRAFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ + LDK AV++Q+V+TK DK+S E+ K ++ +P A+PEV+ TSS Sbjct: 140 VKSVDDEIMNLLDKSAVTFQVVMTKADKVSKAELAANFEQVKGALKKHPAAYPEVVLTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GIE LR I Sbjct: 200 EKGDGIETLRAII 212 >gi|304322174|ref|YP_003855817.1| GTP-binding protein [Parvularcula bermudensis HTCC2503] gi|303301076|gb|ADM10675.1| GTP-binding protein [Parvularcula bermudensis HTCC2503] Length = 213 Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 97/193 (50%), Positives = 123/193 (63%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ GV + LP PE AF+GRSNVGKSSLIN L RK LARTSN PGRT+ LNFF Sbjct: 24 FMLGVTTMAALPPPDLPEFAFAGRSNVGKSSLINRLTGRKALARTSNTPGRTRELNFF-- 81 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L L LVD+PGYGYA+A + V+SW GL +L R LR V++L+D RHG Sbjct: 82 ----DLGGRL---RLVDLPGYGYAKASRSAVESWTGLTRDFLRGRPNLRRVHILVDSRHG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D++ S LD+ AV YQ+VLTKIDK+ PT A ++ I P AHP++I TSS Sbjct: 135 LKPVDEETMSLLDESAVPYQLVLTKIDKIKPTEAARRIKAVGEAIGRRPAAHPDIIATSS 194 Query: 194 VKRKGIEVLRKAI 206 GI LR+ + Sbjct: 195 ETGDGIAALREGM 207 >gi|209886641|ref|YP_002290498.1| GTP-binding protein [Oligotropha carboxidovorans OM5] gi|229813297|sp|B6JJN9|ENGB_OLICO RecName: Full=Probable GTP-binding protein EngB gi|209874837|gb|ACI94633.1| GTP-binding protein [Oligotropha carboxidovorans OM5] Length = 221 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 100/199 (50%), Positives = 122/199 (61%), Gaps = 2/199 (1%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F P I LP EIA +GRSNVGKSSLIN L R LARTS+ PGRTQ L FF Sbjct: 21 WQFFWASPSIETLPPMQGIEIALAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFF 80 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 K L P + LVDMPGYGYA APK + SW LI RYL R+ L VY+LID R Sbjct: 81 --KGPGPLDAQTPELRLVDMPGYGYASAPKTKIASWTTLIHRYLLGRANLARVYVLIDSR 138 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG K D +V + LDK AVSYQIVLTK D++ + ET+ +R +P A+PE++ T Sbjct: 139 HGFKDADDEVLTTLDKSAVSYQIVLTKTDQVKKSALDETMAAMAEKLRKHPAAYPEMLVT 198 Query: 192 SSVKRKGIEVLRKAILETI 210 SS G+ +R AI++ + Sbjct: 199 SSRDGAGMAEMRAAIVKLL 217 >gi|92119159|ref|YP_578888.1| ribosome biogenesis GTP-binding protein YsxC [Nitrobacter hamburgensis X14] gi|119369222|sp|Q1QH69|ENGB_NITHX RecName: Full=Probable GTP-binding protein EngB gi|91802053|gb|ABE64428.1| GTP-binding protein [Nitrobacter hamburgensis X14] Length = 217 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 100/201 (49%), Positives = 124/201 (61%), Gaps = 9/201 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTS PGRTQ L FF Sbjct: 21 WQFIWASPSIETLPPMAGVEVAFAGRSNVGKSSLINALTGRGTLARTSRTPGRTQELIFF 80 Query: 72 V-PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 PKD + LVDMPGYG+A APK + SW LI ++L R++L VY+LID Sbjct: 81 EGPKDAD--------VRLVDMPGYGFASAPKARIASWTSLIHKFLLGRASLARVYVLIDS 132 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RHG+K IDQ + + LD+ AVSYQIVLTK D++ T E E T+ L+ +P A P+V+ Sbjct: 133 RHGIKDIDQAILTTLDRSAVSYQIVLTKADEVKATEMAERTEATRTLLAKHPAAFPDVLV 192 Query: 191 TSSVKRKGIEVLRKAILETIN 211 TSS G+ LR A+ I Sbjct: 193 TSSRTGYGVPELRAAMARLIG 213 >gi|84515674|ref|ZP_01003035.1| GTP-binding protein [Loktanella vestfoldensis SKA53] gi|84510116|gb|EAQ06572.1| GTP-binding protein [Loktanella vestfoldensis SKA53] Length = 215 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/193 (48%), Positives = 125/193 (64%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMDGLPPADRIEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFTA 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A AP V+ W L+ +YL R TLR V++LID RHG Sbjct: 89 GD----------IYVVDLPGYGFANAPVAVVEKWQRLLKQYLQGRQTLRRVFVLIDARHG 138 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K +D+++ S LD AV++Q+V+TK+DKL E+L KT+ + +P A+PE+I TS+ Sbjct: 139 AKAVDEEIMSLLDASAVTFQVVMTKVDKLRGDALAESLAKTRAALVKHPAAYPELILTSA 198 Query: 194 VKRKGIEVLRKAI 206 K +GI LR I Sbjct: 199 EKGEGIPTLRAII 211 >gi|126463487|ref|YP_001044601.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter sphaeroides ATCC 17029] gi|332559540|ref|ZP_08413862.1| GTP-binding protein YsxC [Rhodobacter sphaeroides WS8N] gi|126105151|gb|ABN77829.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC 17029] gi|332277252|gb|EGJ22567.1| GTP-binding protein YsxC [Rhodobacter sphaeroides WS8N] Length = 217 Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 128/193 (66%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK+LAR SN PGRTQ +N+F Sbjct: 30 FVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKSLARASNTPGRTQEINYFAL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P+ LVD+PGYGYA APK V+ W L+ YL+ R TLR ++LID RHG Sbjct: 90 G---------PSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q+V+TK DK+S + L++ + ++ +P A+PE++ TSS Sbjct: 141 VKSVDEEILTLLDRSAVTFQVVMTKADKVSQAEREAVLDQVRGALKKHPAAYPELVMTSS 200 Query: 194 VKRKGIEVLRKAI 206 K GIE LR + Sbjct: 201 EKGMGIETLRTIV 213 >gi|148258512|ref|YP_001243097.1| ribosome biogenesis GTP-binding protein YsxC [Bradyrhizobium sp. BTAi1] gi|146410685|gb|ABQ39191.1| putative GTP-binding protein engB [Bradyrhizobium sp. BTAi1] Length = 220 Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 97/197 (49%), Positives = 127/197 (64%), Gaps = 8/197 (4%) Query: 11 AWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 AW F P I LP +G EIAF+GRSNVGKSSLIN L + LARTS+ PGRTQ L Sbjct: 22 AWRFTHASPSIASLPPMSGQIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGRTQELI 81 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D++ L+ LVDMPGYGYA A K V SW LI ++L R++L VY+LID Sbjct: 82 FFEGPDYAPLR-------LVDMPGYGYAAAAKTKVASWTKLIHQFLLGRASLARVYVLID 134 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K++DQ++F LD+ AVSYQ+VLTK D++ P + +T+ + +P A P+V+ Sbjct: 135 ARHGLKEVDQEIFKTLDRSAVSYQLVLTKADQVKPPELAARIAETEAALAKHPAAFPQVL 194 Query: 190 PTSSVKRKGIEVLRKAI 206 TSS G+ LR A+ Sbjct: 195 ATSSRSGTGMPELRAAM 211 >gi|158425674|ref|YP_001526966.1| ribosome biogenesis GTP-binding protein YsxC [Azorhizobium caulinodans ORS 571] gi|158332563|dbj|BAF90048.1| GTP-binding protein [Azorhizobium caulinodans ORS 571] Length = 223 Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 99/200 (49%), Positives = 119/200 (59%), Gaps = 9/200 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P + +LP EIA GRSNVGKSSL+N L R LARTS PGRTQ L FF Sbjct: 30 WKFVTAAPTVDVLPPMQGVEIALVGRSNVGKSSLVNALTGRTALARTSVTPGRTQELIFF 89 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +P M LVDMPGYG+A+APK VD+W I YL R L V++LID R Sbjct: 90 ---------RCVPEMMLVDMPGYGFAKAPKDKVDAWVATIRAYLRGRVNLARVFVLIDAR 140 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K +D ++ LDK AVSY IVLTK D++ T + + TK IR P A PEV PT Sbjct: 141 HGIKPVDAEILDLLDKAAVSYAIVLTKSDQVKRTDLEAVIADTKDKIRRRPAAFPEVFPT 200 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS KG+ LR AI I+ Sbjct: 201 SSHGGKGLAELRAAIARIID 220 >gi|221640559|ref|YP_002526821.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter sphaeroides KD131] gi|221161340|gb|ACM02320.1| GTP-binding protein engB [Rhodobacter sphaeroides KD131] Length = 217 Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 127/193 (65%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +N+F Sbjct: 30 FVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFAL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P+ LVD+PGYGYA APK V+ W L+ YL+ R TLR ++LID RHG Sbjct: 90 G---------PSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q+V+TK DK+S + L++ + ++ +P A+PE++ TSS Sbjct: 141 VKSVDEEILTLLDRSAVTFQVVMTKADKVSQAEREAVLDQVRGALKKHPAAYPELVMTSS 200 Query: 194 VKRKGIEVLRKAI 206 K GIE LR + Sbjct: 201 EKGMGIETLRTIV 213 >gi|77464647|ref|YP_354151.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter sphaeroides 2.4.1] gi|119369248|sp|Q3IYY4|ENGB_RHOS4 RecName: Full=Probable GTP-binding protein EngB gi|77389065|gb|ABA80250.1| Probable GTP-binding protein [Rhodobacter sphaeroides 2.4.1] Length = 217 Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 126/193 (65%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +N+F Sbjct: 30 FVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFAL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P+ LVD+PGYGYA APK V W L+ YL+ R TLR ++LID RHG Sbjct: 90 G---------PSRYLVDLPGYGYAEAPKPIVQRWQRLLKGYLAGRQTLRRAFVLIDTRHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q+V+TK DK+S + L++ + ++ +P A+PE++ TSS Sbjct: 141 VKSVDEEILTLLDRSAVTFQVVMTKADKVSQAEREAVLDQVRGALKKHPAAYPELVMTSS 200 Query: 194 VKRKGIEVLRKAI 206 K GIE LR + Sbjct: 201 EKGMGIETLRTIV 213 >gi|87198603|ref|YP_495860.1| GTPase EngB [Novosphingobium aromaticivorans DSM 12444] gi|119369226|sp|Q2GAU7|ENGB_NOVAD RecName: Full=Probable GTP-binding protein EngB gi|87134284|gb|ABD25026.1| GTP-binding protein [Novosphingobium aromaticivorans DSM 12444] Length = 217 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 95/195 (48%), Positives = 125/195 (64%), Gaps = 7/195 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P + LP PEIAF+GRSNVGKSSL+N L RK+LARTS PGRTQ LN+F Sbjct: 26 FLKSAPALKFLPDPDVPEIAFAGRSNVGKSSLLNALTGRKSLARTSVTPGRTQELNYFEV 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + L+ LVDMPGYG+A+AP K V++W L+ +L R L+ LLID RHG Sbjct: 86 GEPTRLR-------LVDMPGYGFAKAPPKVVETWRRLVRDFLRGRVVLKRTLLLIDSRHG 138 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D D+ LD+ V Y+IVLTK DK+ + ++ +T R A+PE+I TSS Sbjct: 139 VKPVDDDMMQMLDEAGVGYRIVLTKADKIKASELEKVTAETIAAARKRTAAYPEIIVTSS 198 Query: 194 VKRKGIEVLRKAILE 208 K+ GIE LR A+L+ Sbjct: 199 EKKMGIEELRAAVLQ 213 >gi|146278899|ref|YP_001169058.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter sphaeroides ATCC 17025] gi|145557140|gb|ABP71753.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC 17025] Length = 217 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 92/197 (46%), Positives = 127/197 (64%), Gaps = 9/197 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 A F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +N Sbjct: 26 GACDFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEIN 85 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F P+ LVD+PGYGYA APK V+ W L+ YL+ R TLR ++LID Sbjct: 86 YFALG---------PSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLID 136 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K +D+++ + LD+ AV++Q+V+TK DK+S + L + + ++ +P A+PE++ Sbjct: 137 TRHGIKSVDEEILNLLDRSAVTFQVVMTKADKVSQAEREAVLGQVRGALKKHPAAYPELV 196 Query: 190 PTSSVKRKGIEVLRKAI 206 TSS K GIE LR I Sbjct: 197 MTSSEKGLGIETLRTII 213 >gi|86135822|ref|ZP_01054401.1| GTP-binding protein [Roseobacter sp. MED193] gi|85826696|gb|EAQ46892.1| GTP-binding protein [Roseobacter sp. MED193] Length = 216 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 91/194 (46%), Positives = 121/194 (62%), Gaps = 9/194 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F++GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N+F Sbjct: 28 LFVKGVVAMSGLPDADRMEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYFT 87 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 P + LVD+PGYGYA AP V+ W L+ RYLS R TLR ++LID RH Sbjct: 88 QG---------PELYLVDLPGYGYANAPLAVVEKWQKLLKRYLSGRQTLRRAFVLIDSRH 138 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 GVK +D+++ S LD AV++Q V+TK DK+ +E+ + + +P A+PE++ TS Sbjct: 139 GVKDVDEEIMSLLDSSAVTFQCVMTKADKVKIKDRDRVIEQVRTALARHPAAYPEIVLTS 198 Query: 193 SVKRKGIEVLRKAI 206 S K GI LR I Sbjct: 199 SEKGDGIATLRSII 212 >gi|126737053|ref|ZP_01752788.1| GTP-binding protein [Roseobacter sp. SK209-2-6] gi|126721638|gb|EBA18341.1| GTP-binding protein [Roseobacter sp. SK209-2-6] Length = 216 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 123/193 (63%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP+A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMSGLPEADRMEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYF-- 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ RYLS R TLR ++LID RHG Sbjct: 87 -------TQGPDLFLVDLPGYGYANAPLPVVEKWQKLLKRYLSGRQTLRRAFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ LD AV++Q V+TK DK+ ++ LE+ + + +P A+PE++ TSS Sbjct: 140 VKEVDEEIMKLLDSAAVTFQCVMTKADKVKVKDREKVLEQVRKALARHPAAYPEIVLTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIATLRALI 212 >gi|149913106|ref|ZP_01901640.1| GTP-binding protein [Roseobacter sp. AzwK-3b] gi|149813512|gb|EDM73338.1| GTP-binding protein [Roseobacter sp. AzwK-3b] Length = 216 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 122/193 (63%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKSSLIN L RK +AR SN PGRTQ +NFF Sbjct: 29 FLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGRKAIARASNTPGRTQEINFFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA AP V +W L+ +YLS R +LR ++L+D RHG Sbjct: 89 GE---------SHYLVDLPGYGYANAPLDKVAAWQALLKKYLSGRQSLRRAFVLVDTRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ S LD AV++Q VLTK DK+ + LE+ + + +P A+PE+I TSS Sbjct: 140 IKSVDEEIMSLLDSSAVTFQCVLTKADKVKDKDREAVLEQVRAKLAKHPAAYPEIIMTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIATLRAVI 212 >gi|27383210|ref|NP_774739.1| ribosome biogenesis GTP-binding protein YsxC [Bradyrhizobium japonicum USDA 110] gi|81734112|sp|Q89BP9|ENGB_BRAJA RecName: Full=Probable GTP-binding protein EngB gi|27356384|dbj|BAC53364.1| GTP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 217 Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 95/195 (48%), Positives = 122/195 (62%), Gaps = 7/195 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P I LP EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ L FF Sbjct: 21 WQFIWASPSIQTLPPMDGVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFF 80 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +L+ LVDMPGYGYA+APK V SW LI ++L R++L VY+LID R Sbjct: 81 EVPGKKDLR-------LVDMPGYGYAKAPKSQVASWTELIHKFLLGRASLARVYVLIDAR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K +D ++ LD+ AVSYQIVLTK D++ P+ + +T+ + +P A P V+ T Sbjct: 134 HGLKDVDLEILGTLDRSAVSYQIVLTKADQVKPSELASRIAETEAALAKHPAAFPNVLAT 193 Query: 192 SSVKRKGIEVLRKAI 206 SS G+ LR A+ Sbjct: 194 SSRSATGMAELRAAM 208 >gi|144899246|emb|CAM76110.1| GTP-binding protein [Magnetospirillum gryphiswaldense MSR-1] Length = 193 Score = 181 bits (460), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 100/197 (50%), Positives = 124/197 (62%), Gaps = 9/197 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +RG ++ LP G PE+AF+GRSNVGKSSLIN L R +ARTSN PGRTQ LNFF Sbjct: 1 MRGAVDLETLPPFGLPELAFAGRSNVGKSSLINALCGRSTVARTSNTPGRTQELNFF--- 57 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + + LVDMPGYG+A APK VD+W LI +L R TLR LL+D RHG+ Sbjct: 58 DVNG------RLILVDMPGYGFASAPKDKVDAWTRLIKGFLRGRPTLRRCILLVDSRHGL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K D+++ LDK AV YQ+VLTKIDKL+ + E+T+ I A+P +I TSS Sbjct: 112 KDNDREMMDMLDKAAVVYQVVLTKIDKLNAAEVKAVQERTQAEISKRVAAYPTLILTSSE 171 Query: 195 KRKGIEVLRKAILETIN 211 K GI LR IL+ N Sbjct: 172 KGIGIPELRAEILQLAN 188 >gi|119383630|ref|YP_914686.1| GTPase EngB [Paracoccus denitrificans PD1222] gi|119373397|gb|ABL68990.1| small GTP-binding protein [Paracoccus denitrificans PD1222] Length = 216 Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 91/198 (45%), Positives = 127/198 (64%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A PE+ F+GRSN GKSSLIN L RK+LAR SN PGRTQ +N+F Sbjct: 29 FLKGVVAMDGLPPADRPEVCFAGRSNAGKSSLINALTGRKSLARASNTPGRTQEINYFTL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + L VD+PGYG+A+AP V W L+ YLS R TLR + LID RHG Sbjct: 89 GERAYL---------VDLPGYGFAKAPVAVVAKWQALLKNYLSGRPTLRRAFTLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ LD+ AV +Q+VLTK DK+ + T+ + + ++ +P A+PE++ TSS Sbjct: 140 VKDVDHEIMKLLDRSAVPFQVVLTKADKIGAQAMEATVAQVQEALQKHPAAYPELVITSS 199 Query: 194 VKRKGIEVLRKAILETIN 211 K +GI LR AI+ +++ Sbjct: 200 EKGQGIATLR-AIIASLD 216 >gi|259415701|ref|ZP_05739621.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter sp. TrichCH4B] gi|259347140|gb|EEW58917.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter sp. TrichCH4B] Length = 216 Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 122/193 (63%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +NFF Sbjct: 29 FLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFF-- 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 87 -------TQGPELYLVDLPGYGYANAPLAVVEKWQRLLKQYLSGRQTLRRAFVLIDTRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ LD AV++Q+V+TK DK+ + L++ + + +P A+PE++ TSS Sbjct: 140 VKKVDEEIMKLLDSAAVTFQVVMTKADKVKEKDRAKILDQVRDALSKHPAAYPEIVLTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIATLRSII 212 >gi|99080146|ref|YP_612300.1| ribosome biogenesis GTP-binding protein YsxC [Ruegeria sp. TM1040] gi|119369260|sp|Q1GJX8|ENGB_SILST RecName: Full=Probable GTP-binding protein EngB gi|99036426|gb|ABF63038.1| GTP-binding [Ruegeria sp. TM1040] Length = 216 Score = 181 bits (458), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 122/193 (63%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +NFF Sbjct: 29 FLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFF-- 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 87 -------TQGPELYLVDLPGYGYANAPLAVVEKWQRLLKQYLSGRQTLRRAFVLIDTRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ LD AV++Q+V+TK DK+ + L++ + + +P A+PE++ TSS Sbjct: 140 VKKVDEEIMKLLDTSAVTFQVVMTKADKVKEKDRAKILDQVRDALSKHPAAYPEIVLTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIATLRSII 212 >gi|315498840|ref|YP_004087644.1| ribosome biogenesis gtp-binding protein ysxc [Asticcacaulis excentricus CB 48] gi|315416852|gb|ADU13493.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis excentricus CB 48] Length = 231 Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F + A F+ G +I LP A PE+ F+GRSNVGKSSLIN LV + +LAR SN Sbjct: 29 AARVLFARPA-TFMMGAAKIEQLPAADLPEVTFAGRSNVGKSSLINALVGQNHLARASNE 87 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+ +NFFV + + LVD+PGYG+A+A K V + L YL R L Sbjct: 88 PGRTREVNFFVLDE---------KLRLVDLPGYGWAKASKAEVKKFQNLGRDYLRGRPNL 138 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + YLLID RHG+K +D + LD AVSYQIVLTK DK+ P + +EKT+ IR Sbjct: 139 KRAYLLIDARHGLKAVDNEPMDALDVAAVSYQIVLTKADKIKPHELKAVIEKTQAQIRKR 198 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 P AHP V+ TSS K GI LR I+ T Sbjct: 199 PAAHPVVLATSSEKGHGIPELRAEIMTT 226 >gi|89068161|ref|ZP_01155578.1| GTP-binding protein [Oceanicola granulosus HTCC2516] gi|89046400|gb|EAR52457.1| GTP-binding protein [Oceanicola granulosus HTCC2516] Length = 218 Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 91/198 (45%), Positives = 125/198 (63%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A PE+ F+GRSNVGKS+LIN L RK LAR SN PGRTQ +N+F Sbjct: 31 FVKGVVAMSGLPGADRPEVCFAGRSNVGKSTLINALTGRKALARASNTPGRTQEINYFAL 90 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+A AP V W L+ +YL R TLR ++LID RHG Sbjct: 91 AD---------SHYLVDLPGYGFANAPVAVVAKWQALLKQYLQGRQTLRRAFVLIDARHG 141 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K +D+++ + LD AV++Q VLTK DK+ + L++ + + +P A+PE++ TSS Sbjct: 142 AKAVDEEIMALLDSAAVTFQCVLTKADKIKASERDRVLDQVRATLARHPAAYPEIVLTSS 201 Query: 194 VKRKGIEVLRKAILETIN 211 K GIE LR AI+ I+ Sbjct: 202 EKGDGIETLR-AIVAGID 218 >gi|84499799|ref|ZP_00998087.1| GTP-binding protein [Oceanicola batsensis HTCC2597] gi|84392943|gb|EAQ05154.1| GTP-binding protein [Oceanicola batsensis HTCC2597] Length = 216 Score = 180 bits (457), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 92/193 (47%), Positives = 124/193 (64%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L +NLAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMDGLPPADRMEVCFAGRSNVGKSSLINALTGTRNLARASNTPGRTQEINYFTL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 GDRGYL---------VDLPGYGYANAPLPVVEKWQRLLRQYLSGRQTLRRAFVLIDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ S LD AV++++VLTKIDK+ + L+ T+ + +P A+PE++ TSS Sbjct: 140 VKKVDEEIMSLLDSAAVTFEVVLTKIDKVRRSDLDRALDVTRSALSKHPAAYPELVLTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIATLRSII 212 >gi|56695444|ref|YP_165792.1| ribosome biogenesis GTP-binding protein YsxC [Ruegeria pomeroyi DSS-3] gi|81558731|sp|Q5LW13|ENGB_SILPO RecName: Full=Probable GTP-binding protein EngB gi|56677181|gb|AAV93847.1| GTP-binding protein [Ruegeria pomeroyi DSS-3] Length = 217 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 92/193 (47%), Positives = 119/193 (61%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +NFF Sbjct: 30 FVKGVVAMSGLPPADRVEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFF-- 87 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP K V+ W L+ +YLS R TLR ++LID RHG Sbjct: 88 -------TQGPELYLVDLPGYGYANAPLKVVEKWQKLLKQYLSGRQTLRRAFVLIDARHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ LD AV++Q VLTK DK+ + L + + + +P A+PE++ TSS Sbjct: 141 VKAVDDEIMKLLDTSAVTFQCVLTKADKVKAAERDKVLAQVRAALAKHPAAYPEIVLTSS 200 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 201 EKGDGIATLRSII 213 >gi|75677252|ref|YP_319673.1| GTPase EngB [Nitrobacter winogradskyi Nb-255] gi|119369225|sp|Q3SN20|ENGB_NITWN RecName: Full=Probable GTP-binding protein EngB gi|74422122|gb|ABA06321.1| GTPase [Nitrobacter winogradskyi Nb-255] Length = 217 Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 96/200 (48%), Positives = 123/200 (61%), Gaps = 7/200 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTS PGRTQ L FF Sbjct: 21 WQFIWASPSIETLPPMSGLEVAFAGRSNVGKSSLINALTGRSALARTSRTPGRTQELIFF 80 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +++ LVDMPGYG+A APK + SW LI ++L R+TL VY+LID R Sbjct: 81 EGPKGVDVR-------LVDMPGYGFASAPKARIASWTSLIHQFLLGRATLARVYVLIDAR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K ID+ V LD+ AVSYQ+VLTK D++ T E ++ T+ + ++P A P+V+ T Sbjct: 134 HGIKDIDKTVLGALDRSAVSYQVVLTKADEVKVTEMAERIDITRTQLASHPAAFPDVLVT 193 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS GI LR A+ I Sbjct: 194 SSRTGNGIPELRAAMARLIG 213 >gi|307943176|ref|ZP_07658521.1| ribosome biogenesis GTP-binding protein YsxC [Roseibium sp. TrichSKD4] gi|307773972|gb|EFO33188.1| ribosome biogenesis GTP-binding protein YsxC [Roseibium sp. TrichSKD4] Length = 215 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 97/195 (49%), Positives = 121/195 (62%), Gaps = 8/195 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F V E+ LP++ EIAF+GRSNVGKSSLIN L RK LARTS+ PGRTQ LNFF Sbjct: 23 WTFQTSVTEMVNLPESADTEIAFAGRSNVGKSSLINALTGRKGLARTSSTPGRTQMLNFF 82 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 D + +VDMPGYGYA+APK VD+W L+ YL R LR V+LLID R Sbjct: 83 HAPD--------TPITIVDMPGYGYAQAPKGLVDAWTKLVFSYLRGRPNLRRVFLLIDSR 134 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K+ D + LDK AV YQ+VLTK DK+ + L T+ + A+PE+I T Sbjct: 135 HGLKKNDLETMDLLDKAAVVYQVVLTKSDKIKKPQLAKLLTDTQTALAKRIAAYPEIIAT 194 Query: 192 SSVKRKGIEVLRKAI 206 SS K I++L+ I Sbjct: 195 SSEKDLCIDLLKAEI 209 >gi|159042882|ref|YP_001531676.1| ribosome biogenesis GTP-binding protein YsxC [Dinoroseobacter shibae DFL 12] gi|157910642|gb|ABV92075.1| GTP-binding protein [Dinoroseobacter shibae DFL 12] Length = 217 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 120/193 (62%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKSSLIN L RK LARTSN PGRTQ +N+F Sbjct: 30 FLKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARTSNTPGRTQEINYFCL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYG+A AP V W L+ YL+ R TLR ++LID RHG Sbjct: 90 GEDRYL---------VDVPGYGFAEAPVAVVQKWQALLKAYLTGRPTLRRAFVLIDARHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D ++ S LD AV++Q+VLTK DK+ +TL + + + +P A PE++ TSS Sbjct: 141 IKAVDHEIMSLLDTAAVTFQVVLTKADKIKTAEQDKTLAQVRKELARHPAAFPELLLTSS 200 Query: 194 VKRKGIEVLRKAI 206 K GIE LR + Sbjct: 201 AKGDGIETLRATV 213 >gi|83854935|ref|ZP_00948465.1| GTP-binding protein [Sulfitobacter sp. NAS-14.1] gi|83941458|ref|ZP_00953920.1| GTP-binding protein [Sulfitobacter sp. EE-36] gi|83842778|gb|EAP81945.1| GTP-binding protein [Sulfitobacter sp. NAS-14.1] gi|83847278|gb|EAP85153.1| GTP-binding protein [Sulfitobacter sp. EE-36] Length = 216 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 93/199 (46%), Positives = 126/199 (63%), Gaps = 10/199 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F++GV + LP A E+ F+GRSNVGKS+LIN L K LAR SN PGRTQ +N+F Sbjct: 28 LFVKGVVAMDGLPPADRMEVCFAGRSNVGKSTLINALTGTKALARASNTPGRTQEINYFT 87 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D L VD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RH Sbjct: 88 AADDHYL---------VDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDARH 138 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 GVK++D ++ S LD AV++Q VLTK DK+ Q+ L++ + + +P A+PE++ TS Sbjct: 139 GVKKVDDEIMSLLDSSAVTFQCVLTKADKVKEVERQKVLDQVRGALAKHPAAYPEIVVTS 198 Query: 193 SVKRKGIEVLRKAILETIN 211 S K GI LR AI+ T+ Sbjct: 199 SEKGWGIPTLR-AIIATLE 216 >gi|149203000|ref|ZP_01879971.1| GTP-binding protein [Roseovarius sp. TM1035] gi|149143546|gb|EDM31582.1| GTP-binding protein [Roseovarius sp. TM1035] Length = 216 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 90/193 (46%), Positives = 122/193 (63%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINFFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA AP V W L+ +YLS R TLR ++L+D RHG Sbjct: 89 GE---------SHYLVDLPGYGYANAPLAVVQKWQALLKQYLSGRQTLRRAFVLVDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ S LD AV++Q VLTK DK++ L++ + + +P A+PE+I TSS Sbjct: 140 IKTVDEEIMSLLDASAVTFQCVLTKTDKINAADRDRVLDQVRAKLAPHPAAYPELILTSS 199 Query: 194 VKRKGIEVLRKAI 206 K +G+ LR I Sbjct: 200 EKSEGLATLRATI 212 >gi|110678769|ref|YP_681776.1| ribosome biogenesis GTP-binding protein YsxC [Roseobacter denitrificans OCh 114] gi|119369250|sp|Q16AA3|ENGB_ROSDO RecName: Full=Probable GTP-binding protein EngB gi|109454885|gb|ABG31090.1| GTP-binding protein [Roseobacter denitrificans OCh 114] Length = 216 Score = 178 bits (452), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 91/195 (46%), Positives = 124/195 (63%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMSGLPDPDRLEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFTA 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 GE---------SHYLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ S LD AV++Q+VLTK DK+ ++ L++ + + +P A PE++ TSS Sbjct: 140 VKKVDEEILSLLDSAAVTFQVVLTKADKVKEKEREKVLDQVRTALSKHPAAFPELVITSS 199 Query: 194 VKRKGIEVLRKAILE 208 K GI LR I + Sbjct: 200 EKGWGIPTLRSIITD 214 >gi|126724908|ref|ZP_01740751.1| GTP-binding protein [Rhodobacterales bacterium HTCC2150] gi|126706072|gb|EBA05162.1| GTP-binding protein [Rhodobacterales bacterium HTCC2150] Length = 216 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 88/193 (45%), Positives = 123/193 (63%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + +P A E+ F+GRSNVGKS+LIN L RK LARTSN PGRTQ +NFF Sbjct: 29 FLKGVVAMDGMPPADRLEVCFAGRSNVGKSTLINALTGRKALARTSNTPGRTQEINFFTV 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYG+A+AP V W L+ YLS R LR ++LID RHG Sbjct: 89 AE---------SHYLVDLPGYGFAKAPLPTVKKWQALLKAYLSGRQNLRRAFVLIDFRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ L+ AV++Q++LTK DK+ ++ L +T+ + +P A+PE++ TSS Sbjct: 140 VKDVDDEIMQLLNSSAVTFQVILTKADKVKEADREKILAQTRAALAKHPAAYPEILVTSS 199 Query: 194 VKRKGIEVLRKAI 206 K +GIE LR + Sbjct: 200 EKGEGIENLRSIV 212 >gi|323137576|ref|ZP_08072653.1| ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp. ATCC 49242] gi|322397202|gb|EFX99726.1| ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp. ATCC 49242] Length = 217 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 93/183 (50%), Positives = 117/183 (63%), Gaps = 4/183 (2%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP GPPEIAF+GRSNVGKSSL+N L NRK LAR S+ PGRTQ LNFF + Sbjct: 30 LPPLGPPEIAFAGRSNVGKSSLLNALTNRKTLARVSHTPGRTQQLNFFALGGAPGAER-- 87 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVDMPGYGYA K+ V SW L+ YL R++L V++L+D R GVK +D ++F Sbjct: 88 --LRLVDMPGYGYAAVGKEKVASWSVLMRDYLRGRASLARVFVLVDGRRGVKPVDAEMFD 145 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 LD+ AVSYQ++LTK D+L E L T + P A+PE+I TSS +GI LR Sbjct: 146 LLDQSAVSYQVILTKHDELKVAERAEVLAATAEALSRRPAAYPEIIFTSSHTGEGIAELR 205 Query: 204 KAI 206 A+ Sbjct: 206 GAV 208 >gi|89053125|ref|YP_508576.1| ribosome biogenesis GTP-binding protein YsxC [Jannaschia sp. CCS1] gi|119369206|sp|Q28UR1|ENGB_JANSC RecName: Full=Probable GTP-binding protein EngB gi|88862674|gb|ABD53551.1| GTP-binding protein [Jannaschia sp. CCS1] Length = 218 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 93/193 (48%), Positives = 119/193 (61%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKS+LIN L RK LAR SN PGRTQ +N+F Sbjct: 30 FLKGVVAMDGLPPADRIEVCFAGRSNVGKSTLINALTGRKGLARASNTPGRTQEINYFTL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA AP V W L+ YL R+TLR ++LID RHG Sbjct: 90 LD---------SHYLVDLPGYGYAEAPLHVVQQWQALLKSYLQGRATLRRAFVLIDARHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ LD AV +Q VLTK DK+ +L +T+ + N+P A+PE+I TSS Sbjct: 141 VKAVDEEIMKLLDIAAVPFQTVLTKSDKVKGRDRDASLARTRKALANHPAAYPEIILTSS 200 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 201 EKGDGIPTLRATI 213 >gi|218530581|ref|YP_002421397.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium chloromethanicum CM4] gi|240138938|ref|YP_002963413.1| putative GTP-binding protein engB [Methylobacterium extorquens AM1] gi|254561546|ref|YP_003068641.1| GTP-binding protein engB [Methylobacterium extorquens DM4] gi|218522884|gb|ACK83469.1| GTP-binding protein HSR1-related [Methylobacterium chloromethanicum CM4] gi|240008910|gb|ACS40136.1| putative GTP-binding protein engB [Methylobacterium extorquens AM1] gi|254268824|emb|CAX24785.1| putative GTP-binding protein engB [Methylobacterium extorquens DM4] Length = 219 Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 99/201 (49%), Positives = 120/201 (59%), Gaps = 10/201 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F SA F P +G LP EIAF+GRSNVGKSSL+N L R LARTS+ PGRT Sbjct: 20 LFAGSA-DFATAAPALGALPPMEGVEIAFAGRSNVGKSSLVNALTGRNTLARTSHTPGRT 78 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF + + LVDMPGYGYA K V++W LI YL RS L VY Sbjct: 79 QQLNFFRIGER---------LTLVDMPGYGYAAVEKAKVEAWTKLIHAYLKGRSNLARVY 129 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K+ID D+ LDK AVSYQIVLTK D L ++ + + P A+ Sbjct: 130 LLIDSRHGLKEIDTDLLDGLDKAAVSYQIVLTKGDALKKAEIEKRIAGIHAALAKRPAAY 189 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 PEV+ TSS +G+ LR +I Sbjct: 190 PEVLLTSSRDDRGVAELRASI 210 >gi|163733768|ref|ZP_02141210.1| GTPase EngB [Roseobacter litoralis Och 149] gi|161392879|gb|EDQ17206.1| GTPase EngB [Roseobacter litoralis Och 149] Length = 216 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 90/195 (46%), Positives = 123/195 (63%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMSGLPDPDRMEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFTA 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 GE---------SHYLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K++D+++ S LD AV++Q+VLTK DK+ ++ L++ + + +P A PE++ TSS Sbjct: 140 AKKVDEEILSLLDSAAVTFQVVLTKADKVKEKEREKVLDQVRNALSKHPAAFPELVVTSS 199 Query: 194 VKRKGIEVLRKAILE 208 K GI LR I + Sbjct: 200 EKGWGIPTLRSIITD 214 >gi|114770123|ref|ZP_01447661.1| GTP-binding protein [alpha proteobacterium HTCC2255] gi|114548960|gb|EAU51843.1| GTP-binding protein [alpha proteobacterium HTCC2255] Length = 216 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 92/193 (47%), Positives = 123/193 (63%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + +P A E+ F+GRSNVGKSSLIN L RK+LARTSN PGRTQ +NFF Sbjct: 29 FLKGVVGMDGMPPADRMEVCFAGRSNVGKSSLINALTGRKSLARTSNTPGRTQEINFFTL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYG+A AP V W L+ YLS R++LR V+LLID RHG Sbjct: 89 SE---------SHYLVDVPGYGFANAPLPVVKKWQTLLKAYLSGRASLRRVFLLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ L + AV++Q+VLTK DK ++ + +T ++ YP A+PE + TSS Sbjct: 140 VKSVDEEIMELLGRSAVTFQVVLTKSDKPKKNDLEKVISETGRIVAKYPAAYPEFVLTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIPTLRHII 212 >gi|83859292|ref|ZP_00952813.1| GTP-binding protein [Oceanicaulis alexandrii HTCC2633] gi|83852739|gb|EAP90592.1| GTP-binding protein [Oceanicaulis alexandrii HTCC2633] Length = 192 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 94/190 (49%), Positives = 118/190 (62%), Gaps = 9/190 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 GV + LP PE+AF+GRSNVGKSSLIN L RK LAR S PGRT+ LNFF Sbjct: 3 GVVSMDTLPDTHVPEVAFAGRSNVGKSSLINALTGRKQLARASTEPGRTRELNFF----- 57 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 ++ L +VD+PGYG+A+APK+ W L YL R L+ V+LLID RHG+K Sbjct: 58 -DMHGRL---RIVDLPGYGFAKAPKEVAARWTRLTQNYLRGRVNLKRVFLLIDSRHGIKP 113 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + LD AV YQIVLTK DKL P+ AQ+ LE+T+ + P A P + TSS KR Sbjct: 114 SDEAIMKVLDSAAVVYQIVLTKTDKLKPSEAQKRLEETQAKVARRPAAFPVISATSSAKR 173 Query: 197 KGIEVLRKAI 206 G++ LR I Sbjct: 174 DGLDELRGEI 183 >gi|163851773|ref|YP_001639816.1| GTPase EngB [Methylobacterium extorquens PA1] gi|163663378|gb|ABY30745.1| GTP-binding protein HSR1-related [Methylobacterium extorquens PA1] Length = 256 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/201 (49%), Positives = 120/201 (59%), Gaps = 10/201 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F SA F P +G LP EIAF+GRSNVGKSSL+N L R LARTS+ PGRT Sbjct: 57 LFAGSA-DFATAAPALGALPPMEGVEIAFAGRSNVGKSSLVNALTGRNTLARTSHTPGRT 115 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF + + LVDMPGYGYA K V++W LI YL RS L VY Sbjct: 116 QQLNFFRIGER---------LTLVDMPGYGYAAVEKAKVEAWTKLIHAYLKGRSNLARVY 166 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K+ID D+ LDK AVSYQIVLTK D L ++ + + P A+ Sbjct: 167 LLIDSRHGLKEIDTDLLDGLDKAAVSYQIVLTKGDALKKAEIEKRIAGIHAALAKRPAAY 226 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 PEV+ TSS +G+ LR +I Sbjct: 227 PEVLLTSSRDDRGVAELRASI 247 >gi|84685376|ref|ZP_01013274.1| GTP-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84666533|gb|EAQ13005.1| GTP-binding protein [Rhodobacterales bacterium HTCC2654] Length = 218 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 90/193 (46%), Positives = 121/193 (62%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 31 FLKGVVAMNGLPPDDRIEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFTT 90 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYG+A AP V+ W L+ YLS R++LR ++LID RHG Sbjct: 91 TD---------GPYLVDLPGYGFANAPVAVVEKWQKLLKSYLSGRASLRRAFVLIDTRHG 141 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ + LDK AV++Q VLTK DK+ + L++ + + +P A+PE++ TSS Sbjct: 142 IKAVDEEIMTLLDKSAVTFQAVLTKADKVKAADRDKILKQVREKLSKHPAAYPELVMTSS 201 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 202 EKGDGIATLRAII 214 >gi|254461126|ref|ZP_05074542.1| GTP-binding protein [Rhodobacterales bacterium HTCC2083] gi|206677715|gb|EDZ42202.1| GTP-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 217 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 93/197 (47%), Positives = 124/197 (62%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKS+LIN L K LAR SN PGRTQ +NFF Sbjct: 30 FVKGVVAMSGLPDADRMEVCFAGRSNVGKSTLINALTGHKALARASNTPGRTQEINFFTA 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 90 AE---------SHYLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ S LD AV++Q VLTK DK+ ++ L + + + +P A PE++ TSS Sbjct: 141 VKAVDHEIMSLLDSSAVTFQCVLTKADKVKLVDREKVLNQVRGELAKHPAAFPEMVLTSS 200 Query: 194 VKRKGIEVLRKAILETI 210 K GIE LR AI+ T+ Sbjct: 201 EKGDGIEQLR-AIIATL 216 >gi|85374953|ref|YP_459015.1| ribosome biogenesis GTP-binding protein YsxC [Erythrobacter litoralis HTCC2594] gi|84788036|gb|ABC64218.1| probable GTPase [Erythrobacter litoralis HTCC2594] Length = 213 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 90/194 (46%), Positives = 122/194 (62%), Gaps = 7/194 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP+ PEIAF GRSNVGKSSL+N L R+++ARTS PGRTQ LNFF Sbjct: 23 FLLSAPQLKFLPEPTVPEIAFCGRSNVGKSSLLNALTGRRSIARTSVTPGRTQELNFFEV 82 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + + LVDMPGYG+A+AP K V+ W L+ YL R L +L+D RHG Sbjct: 83 GEPTQFR-------LVDMPGYGFAKAPVKVVERWKNLVRTYLKGRQVLARTLVLVDARHG 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ + LD+ AVSY++VLTK DK+ + + T K R +P A PE+ TSS Sbjct: 136 LKDVDREMMTMLDETAVSYRVVLTKADKIKASELEATAAKVAEEARKHPAAFPELHITSS 195 Query: 194 VKRKGIEVLRKAIL 207 K GI LR A++ Sbjct: 196 EKGLGIAALRAAVV 209 >gi|85705861|ref|ZP_01036957.1| GTP-binding protein [Roseovarius sp. 217] gi|85669449|gb|EAQ24314.1| GTP-binding protein [Roseovarius sp. 217] Length = 216 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 89/193 (46%), Positives = 121/193 (62%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINFFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA AP V W L+ +YLS R TLR ++L+D RHG Sbjct: 89 GE---------SHYLVDLPGYGYANAPLAVVQKWQALLKQYLSGRQTLRRAFVLVDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ + LD AV++Q VLTK DK++ L++ + + +P A PE+I TSS Sbjct: 140 IKTVDEEIMTLLDGAAVTFQCVLTKTDKINAADRDRVLDQVRSKLAPHPAAFPELILTSS 199 Query: 194 VKRKGIEVLRKAI 206 K +G+ LR I Sbjct: 200 EKSEGLATLRATI 212 >gi|83594669|ref|YP_428421.1| ribosome biogenesis GTP-binding protein YsxC [Rhodospirillum rubrum ATCC 11170] gi|119369247|sp|Q2RP11|ENGB_RHORT RecName: Full=Probable GTP-binding protein EngB gi|83577583|gb|ABC24134.1| GTP-binding [Rhodospirillum rubrum ATCC 11170] Length = 231 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/187 (50%), Positives = 115/187 (61%), Gaps = 4/187 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G + LP EIAF+GRSNVGKSSL+N L RK LARTSN PGRTQ LN+F Sbjct: 37 FVMGCVSLDTLPDHDLSEIAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQELNYF-- 94 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + PA+ +VD+PGYG+A APK V W LI+ YL R LR V LLID RHG Sbjct: 95 --RLGPEAQDPALMMVDLPGYGFAEAPKDAVKRWTRLIMAYLRGRPALRRVCLLIDSRHG 152 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+DV LD+ AVSYQIVLTK DKL + L + + AHP+VI TSS Sbjct: 153 IKENDRDVMRMLDEAAVSYQIVLTKADKLKAAEITDVLARVVAETAKHVAAHPDVIVTSS 212 Query: 194 VKRKGIE 200 GI+ Sbjct: 213 QSGAGID 219 >gi|46201109|ref|ZP_00055731.2| COG0218: Predicted GTPase [Magnetospirillum magnetotacticum MS-1] Length = 228 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/190 (50%), Positives = 117/190 (61%), Gaps = 9/190 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++G + LP A E+AF+GRSNVGKSSLIN L R LARTSN PGRTQ LNFF Sbjct: 41 FMQGASGLDHLPAATLTEVAFAGRSNVGKSSLINALTGRNTLARTSNTPGRTQELNFF-- 98 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NL L LVDMPGYG+A+APK V+ W L+ +L RS LR +L+D RHG Sbjct: 99 ----NLGGRL---VLVDMPGYGFAQAPKGLVEKWTRLVNGFLKGRSVLRRAVVLVDSRHG 151 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+D+ LDK AV YQ+VLTK DKL + +T I++ AHP +I TSS Sbjct: 152 LKDSDRDMMKMLDKAAVVYQVVLTKADKLKASELDAVQARTLEEIKSRVAAHPSLIVTSS 211 Query: 194 VKRKGIEVLR 203 K GI LR Sbjct: 212 EKGTGIPELR 221 >gi|83950485|ref|ZP_00959218.1| GTP-binding protein [Roseovarius nubinhibens ISM] gi|83838384|gb|EAP77680.1| GTP-binding protein [Roseovarius nubinhibens ISM] Length = 216 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/193 (48%), Positives = 119/193 (61%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEVNFFTM 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA AP V W L+ YLS R+ LR ++LID RHG Sbjct: 89 AD---------SHYLVDLPGYGYANAPLPIVAKWQALLKSYLSGRANLRRAFVLIDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD AV++Q VLTK DK+ ++ L + + + +P A PE+I TSS Sbjct: 140 VKAVDEEIMALLDSSAVTFQTVLTKADKVKEAEREKILTQVRSRLATHPAAFPELIVTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGWGIPTLRATI 212 >gi|254293246|ref|YP_003059269.1| GTP-binding protein HSR1-related [Hirschia baltica ATCC 49814] gi|254041777|gb|ACT58572.1| GTP-binding protein HSR1-related [Hirschia baltica ATCC 49814] Length = 213 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 91/194 (46%), Positives = 121/194 (62%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A PEIAF+GRSNVGKSSLIN L NRK LAR S PGRTQ +NFF Sbjct: 26 FVKGVVNMQGLPPADRPEIAFAGRSNVGKSSLINALFNRKQLARASGQPGRTQEINFFTI 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L A+ +VD+PGYG+A+APK VD W YL R+ L+ V+LLID R G Sbjct: 86 ---------LEALYVVDLPGYGFAKAPKAVVDKWTNFTQTYLRGRTNLQRVFLLIDSRRG 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V +D+ + LD+ A++YQIVLTK DKL + + ++ I+ P AHP ++ TS+ Sbjct: 137 VGDVDRGIMKVLDRAALNYQIVLTKADKLKKSELDKVIDDAVVAIKKNPAAHPRIMLTSA 196 Query: 194 VKRKGIEVLRKAIL 207 K G+ L+ I+ Sbjct: 197 EKNIGLPELKAEIV 210 >gi|254475298|ref|ZP_05088684.1| hypothetical protein RR11_1134 [Ruegeria sp. R11] gi|214029541|gb|EEB70376.1| hypothetical protein RR11_1134 [Ruegeria sp. R11] Length = 216 Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 88/193 (45%), Positives = 119/193 (61%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMSGLPDADRMEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYF-- 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 87 -------TQGPELYLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D ++ LD AV++Q+V+TK DK+ L + + + +P A+PE++ TSS Sbjct: 140 IKKVDAEIMKLLDSSAVTFQVVMTKADKVKEKDRAAVLSQVREALSKHPAAYPEIVLTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIPTLRAII 212 >gi|298290370|ref|YP_003692309.1| ribosome biogenesis GTP-binding protein YsxC [Starkeya novella DSM 506] gi|296926881|gb|ADH87690.1| ribosome biogenesis GTP-binding protein YsxC [Starkeya novella DSM 506] Length = 233 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 97/196 (49%), Positives = 117/196 (59%), Gaps = 9/196 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL P I +P EIA +GRSNVGKSSL+N L RK LARTS PGRTQ L FF Sbjct: 36 WNFLSAAPTIPTMPPMRGIEIALAGRSNVGKSSLVNALTGRKALARTSVTPGRTQELIFF 95 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 P + LVDMPGYG+A+APK VD+W I YL R+ L V++LID R Sbjct: 96 ---------GLGPELTLVDMPGYGFAKAPKDKVDAWTATIHAYLRGRANLARVFVLIDSR 146 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K ID +V LDK AVSY IVLTK D+L + +E T+ + P A P V PT Sbjct: 147 HGLKPIDTEVLDGLDKAAVSYAIVLTKADQLKKGELAQRVEATQAALLRRPAAFPIVFPT 206 Query: 192 SSVKRKGIEVLRKAIL 207 SS + GI LR A++ Sbjct: 207 SSREGWGIPELRAAVV 222 >gi|163745581|ref|ZP_02152941.1| GTPase EngB [Oceanibulbus indolifex HEL-45] gi|161382399|gb|EDQ06808.1| GTPase EngB [Oceanibulbus indolifex HEL-45] Length = 216 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 93/197 (47%), Positives = 124/197 (62%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP E+ F+GRSNVGKS+LIN L K LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMDGLPPPDRMEVCFAGRSNVGKSTLINALTGMKALARASNTPGRTQEINFFTA 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 GE---------EHYLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D ++ S LD AV++Q+VLTK DK+ + LE+ K + +P A+PE++ TSS Sbjct: 140 VKKVDNEIMSLLDSSAVTFQVVLTKGDKVKEAERTKILEQVKEALSKHPAAYPEIVVTSS 199 Query: 194 VKRKGIEVLRKAILETI 210 K GI LR AI+ T+ Sbjct: 200 EKGWGIPTLR-AIIATL 215 >gi|85717143|ref|ZP_01048102.1| GTP-binding protein [Nitrobacter sp. Nb-311A] gi|85696034|gb|EAQ33933.1| GTP-binding protein [Nitrobacter sp. Nb-311A] Length = 249 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/200 (46%), Positives = 124/200 (62%), Gaps = 7/200 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTS PGRTQ L FF Sbjct: 53 WQFIWASPSIETLPPMAGLEVAFAGRSNVGKSSLINALTGRNALARTSRTPGRTQELIFF 112 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 ++++ LVDMPGYG+A APK + SW LI R+L R+TL VY+LID R Sbjct: 113 EGPKGTDVR-------LVDMPGYGFASAPKDRIASWTSLIHRFLLGRATLARVYVLIDSR 165 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K D++V + LD+ AVSYQ+VLTK D++ ++ ++ T+ + ++ A P+V+ T Sbjct: 166 HGIKDTDRNVLTTLDRAAVSYQVVLTKADEVKAAELEKRIDATRTQLLSHSAAFPDVLAT 225 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS G+ LR A+ I Sbjct: 226 SSRTGYGMPELRAAMARLIG 245 >gi|260427039|ref|ZP_05781018.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. SE45] gi|260421531|gb|EEX14782.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. SE45] Length = 217 Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 89/193 (46%), Positives = 123/193 (63%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 30 FLKGVVAMDGLPPDDRTEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINFFTL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A AP V+ W L+ +YLS R++LR ++LID RHG Sbjct: 90 GE---------ERYLVDLPGYGFANAPVAVVEKWQRLLKQYLSGRASLRRAFVLIDSRHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q VLTK DK+ ++ L++ + + +P A+PE++ TSS Sbjct: 141 VKAVDEEIMTLLDRSAVTFQAVLTKSDKIREKEREKVLDQVREKLSKHPAAYPELVLTSS 200 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 201 EKGDGIATLRAII 213 >gi|254509788|ref|ZP_05121855.1| GTP-binding protein [Rhodobacteraceae bacterium KLH11] gi|221533499|gb|EEE36487.1| GTP-binding protein [Rhodobacteraceae bacterium KLH11] Length = 217 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 119/193 (61%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +NFF Sbjct: 30 FVKGVVAMNGLPVPDRLEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFF-- 87 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP K V+ W L+ +YLS R TLR ++LID RHG Sbjct: 88 -------TQGPELYLVDLPGYGYANAPVKVVEKWQRLLKQYLSGRQTLRRAFVLIDSRHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ LD AV++Q VLTK DK+ ++ L++ + + +P A PE++ TSS Sbjct: 141 VKPVDAEIMKLLDTSAVTFQCVLTKADKVKAKDQEKVLDQVRASLAKHPAAFPEIVLTSS 200 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 201 EKGDGIPTLRSII 213 >gi|326386368|ref|ZP_08207991.1| GTPase EngB [Novosphingobium nitrogenifigens DSM 19370] gi|326209029|gb|EGD59823.1| GTPase EngB [Novosphingobium nitrogenifigens DSM 19370] Length = 221 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 90/195 (46%), Positives = 123/195 (63%), Gaps = 7/195 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P + +P PEIAF+GRSNVGKSSLIN + RK++AR S PGRTQ LN+F Sbjct: 30 FLKSAPSLQFIPDPEEPEIAFAGRSNVGKSSLINAITGRKSIARASVTPGRTQELNWFEV 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + ++++ LVDMPGYG+A+AP K V+ W L+ +L R+ L+ LLID RHG Sbjct: 90 GNPTSIR-------LVDMPGYGFAKAPPKVVEQWRRLVRDFLRGRTVLKRTLLLIDARHG 142 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ LD+ AV Y++VLTK DK+ T+ + R + A+P V+ TS+ Sbjct: 143 VKPVDVEMMQMLDEAAVGYRLVLTKADKIKAEELAAVHAATEAVARKHIAAYPGVLVTSA 202 Query: 194 VKRKGIEVLRKAILE 208 KR GI LR AILE Sbjct: 203 EKRSGIAALRAAILE 217 >gi|254467073|ref|ZP_05080484.1| hypothetical protein RBY4I_3686 [Rhodobacterales bacterium Y4I] gi|206687981|gb|EDZ48463.1| hypothetical protein RBY4I_3686 [Rhodobacterales bacterium Y4I] Length = 215 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 88/193 (45%), Positives = 119/193 (61%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F +GV + LP A E+ F+GRSNVGKSS+IN + K +AR SN PGRTQ +NFF Sbjct: 29 FDKGVVAMNGLPDADRVEVCFAGRSNVGKSSVINAVTGTKGIARASNTPGRTQEINFFTQ 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R LR ++LID RHG Sbjct: 89 G---------PDLYLVDLPGYGYANAPLAVVEKWQKLLKQYLSGRQNLRRAFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+D+ LD AV++Q V+TK DK+ + LE+ + + +P A+PE++ TSS Sbjct: 140 VKKVDEDIMKLLDSAAVTFQCVMTKADKVKEKDRAKVLEQVRGALARHPAAYPEIVLTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIPTLRSII 212 >gi|260577137|ref|ZP_05845114.1| GTP-binding protein HSR1-related protein [Rhodobacter sp. SW2] gi|259020611|gb|EEW23930.1| GTP-binding protein HSR1-related protein [Rhodobacter sp. SW2] Length = 216 Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 91/198 (45%), Positives = 125/198 (63%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK+LAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMPGLPPADRLEVCFAGRSNVGKSSLINALTGRKSLARASNTPGRTQEINYFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA AP V+ W L+ YL R TLR ++LID RHG Sbjct: 89 GT---------ERYLVDLPGYGYAEAPVAVVEKWQRLLKNYLQGRQTLRRAFVLIDTRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q VLTK DK+S +++ + + +P A+PE++ TS+ Sbjct: 140 VKAVDEEILTLLDRSAVTFQAVLTKADKVSKAERDAIIDQVRGALAKHPAAYPELVVTSA 199 Query: 194 VKRKGIEVLRKAILETIN 211 K GIE LR AI+ T+ Sbjct: 200 EKGDGIETLR-AIIATLQ 216 >gi|154244318|ref|YP_001415276.1| ribosome biogenesis GTP-binding protein YsxC [Xanthobacter autotrophicus Py2] gi|154158403|gb|ABS65619.1| small GTP-binding protein [Xanthobacter autotrophicus Py2] Length = 217 Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 90/195 (46%), Positives = 118/195 (60%), Gaps = 9/195 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P + +LP EIA +GRSNVGKSSL+N L RK LARTS PGRTQ L FF Sbjct: 24 WQFVTAAPTVEVLPPMVGMEIALAGRSNVGKSSLVNALTGRKALARTSVTPGRTQELIFF 83 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 P ++LVDMPGYG+A+APK+ V++W I YL R L V++LID R Sbjct: 84 ---------RVGPELSLVDMPGYGFAKAPKEKVEAWTHTIKAYLRGRVNLARVFVLIDSR 134 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K +D+++ LDK AVSY I+LTK D++ P+ + + I+ P A+P V PT Sbjct: 135 HGIKPVDEEILDLLDKAAVSYAIILTKSDQVKPSALPHVIASVQEKIKRRPAAYPVVFPT 194 Query: 192 SSVKRKGIEVLRKAI 206 SS G LR A+ Sbjct: 195 SSQTGAGFPELRAAV 209 >gi|163740283|ref|ZP_02147677.1| GTP-binding protein [Phaeobacter gallaeciensis 2.10] gi|161386141|gb|EDQ10516.1| GTP-binding protein [Phaeobacter gallaeciensis 2.10] Length = 216 Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 88/193 (45%), Positives = 120/193 (62%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYF-- 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 87 -------TQGPELYLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D ++ + LD AV++Q V+TK DK+ +E+ + + +P A+PE++ TSS Sbjct: 140 IKKVDDEIMTRLDSSAVTFQCVMTKADKVKDKDRAVVMEQVRSALSKHPAAYPEIVMTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIATLRSII 212 >gi|260432490|ref|ZP_05786461.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter lacuscaerulensis ITI-1157] gi|260416318|gb|EEX09577.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter lacuscaerulensis ITI-1157] Length = 214 Score = 174 bits (441), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 90/193 (46%), Positives = 119/193 (61%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +NFF Sbjct: 27 FVKGVVAMNGLPAPDRLEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFF-- 84 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP K V+ W L+ +YLS R TLR ++LID RHG Sbjct: 85 -------TQGPDLYLVDLPGYGYANAPVKVVEKWQRLLKQYLSGRQTLRRAFVLIDSRHG 137 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ LD AV++Q V+TK DK+ ++ L + + + +P A+PE++ TSS Sbjct: 138 VKPVDDEIMKLLDTSAVTFQCVMTKADKVKAKDREKVLGQVRGALSKHPAAYPEIVLTSS 197 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 198 EKGDGIPTLRSII 210 >gi|288957365|ref|YP_003447706.1| GTP-binding protein [Azospirillum sp. B510] gi|288909673|dbj|BAI71162.1| GTP-binding protein [Azospirillum sp. B510] Length = 227 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 121/193 (62%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G + LP+A PE+AF+GRSNVGKSSL+N L RK LARTSN PGRTQ LNFF Sbjct: 36 FVWGANALNQLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFF-- 93 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NL + L LVDMPGYGYA+ K+ V++W ++ R+L R TLR +LID RHG Sbjct: 94 ----NLGDRLK---LVDMPGYGYAKESKEKVEAWNDMVRRFLRGRVTLRRALVLIDSRHG 146 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D ++ LD+ AV Y +VLTK DK+ + T+ ++ +P A P++ TSS Sbjct: 147 LKPNDHEIMEMLDRTAVPYVVVLTKADKVKEADLDKVRRATELGLKKHPAAFPDIHVTSS 206 Query: 194 VKRKGIEVLRKAI 206 K GI LR ++ Sbjct: 207 EKGLGIAELRASL 219 >gi|254487465|ref|ZP_05100670.1| GTP-binding protein [Roseobacter sp. GAI101] gi|214044334|gb|EEB84972.1| GTP-binding protein [Roseobacter sp. GAI101] Length = 216 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 91/198 (45%), Positives = 125/198 (63%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKS+LIN L K LAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMDGLPPADRMEVCFAGRSNVGKSTLINALTGMKALARASNTPGRTQEINYFTA 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 GEDHYL---------VDLPGYGYANAPLPIVEKWQRLLKQYLSGRQTLRRAFVLIDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ S LD AV++Q VLTK DK+ + L++ + + +P A+PE++ TSS Sbjct: 140 VKKVDEEIMSLLDSSAVTFQCVLTKADKVKEVERAKILDQVRGALAKHPAAYPEIVVTSS 199 Query: 194 VKRKGIEVLRKAILETIN 211 K GI LR AI+ T+ Sbjct: 200 EKGWGIPTLR-AIIATLE 216 >gi|163739490|ref|ZP_02146900.1| GTP-binding protein [Phaeobacter gallaeciensis BS107] gi|161387243|gb|EDQ11602.1| GTP-binding protein [Phaeobacter gallaeciensis BS107] Length = 216 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 88/193 (45%), Positives = 120/193 (62%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYF-- 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 87 -------TQGPELYLVDLPGYGYANAPLPIVEKWQRLLKQYLSGRQTLRRSFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D ++ + LD AV++Q V+TK DK+ +E+ + + +P A+PE++ TSS Sbjct: 140 IKKVDDEIMTRLDSSAVTFQCVMTKADKVKDKDRAVVMEQVRSALSKHPAAYPEIVMTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIATLRSII 212 >gi|162319777|ref|YP_423720.2| ribosome biogenesis GTP-binding protein YsxC [Magnetospirillum magneticum AMB-1] Length = 187 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 95/189 (50%), Positives = 114/189 (60%), Gaps = 9/189 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++G + LP A E+AF+GRSNVGKSSLIN L R LARTSN PGRTQ LNFF Sbjct: 1 MQGASGLDHLPAATLTEVAFAGRSNVGKSSLINALTGRNTLARTSNTPGRTQELNFF--- 57 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 NL L LVDMPGYG+A+APK V+ W L+ +L RS LR +L+D RHG+ Sbjct: 58 ---NLGGRL---ILVDMPGYGFAQAPKGLVEKWTRLVNGFLKGRSVLRRAVVLVDSRHGL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K D+D+ LDK AV YQ+VLTK DKL +T I+ AHP +I TSS Sbjct: 112 KDSDRDMMKMLDKAAVVYQVVLTKADKLKAAELDAVQARTLEEIKGRVAAHPHLIVTSSE 171 Query: 195 KRKGIEVLR 203 K GI LR Sbjct: 172 KGTGIPELR 180 >gi|91974552|ref|YP_567211.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris BisB5] gi|119369246|sp|Q13F29|ENGB_RHOPS RecName: Full=Probable GTP-binding protein EngB gi|91681008|gb|ABE37310.1| GTP-binding [Rhodopseudomonas palustris BisB5] Length = 217 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 96/200 (48%), Positives = 123/200 (61%), Gaps = 7/200 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTSN PGRTQ L FF Sbjct: 21 WHFIWASPSIETLPPMAGIEVAFAGRSNVGKSSLINALTGRNALARTSNTPGRTQELIFF 80 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + L+ LVDMPGYGYA A K V SW LI ++L R+TL VY+LID R Sbjct: 81 DGPTDAGLR-------LVDMPGYGYAAASKAKVASWTSLIHKFLQGRATLARVYVLIDGR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K +D D+ LDK AVSYQIV TK D++ ++ + TK ++ +P A PE++ T Sbjct: 134 HGLKDVDLDILKTLDKSAVSYQIVFTKADQVKAAELEQRIAATKTVLAKHPAAFPELLMT 193 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS G+ LR A++ ++ Sbjct: 194 SSRTGAGMPELRAAMIRLLD 213 >gi|316932099|ref|YP_004107081.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris DX-1] gi|315599813|gb|ADU42348.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris DX-1] Length = 216 Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 99/200 (49%), Positives = 121/200 (60%), Gaps = 7/200 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P I LP G EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ L FF Sbjct: 21 WHFIWASPSIETLPPMGSVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFF 80 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + L+ LVDMPGYGYA A K V SW LI +L R+TL VY+LID R Sbjct: 81 EGPPNAGLR-------LVDMPGYGYAAASKAKVASWTSLIHHFLQGRATLARVYVLIDGR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K +D D+ LDK AVSYQIVLTK D++ E + T + +P A PEV+ T Sbjct: 134 HGLKDVDLDILKTLDKAAVSYQIVLTKADQVKAAELSERVTATVAALTKHPAAFPEVLTT 193 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS G+ LR A++ ++ Sbjct: 194 SSRTGAGMPELRAAMIRLLD 213 >gi|182680231|ref|YP_001834377.1| ribosome biogenesis GTP-binding protein YsxC [Beijerinckia indica subsp. indica ATCC 9039] gi|182636114|gb|ACB96888.1| GTP-binding protein HSR1-related [Beijerinckia indica subsp. indica ATCC 9039] Length = 244 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 95/195 (48%), Positives = 117/195 (60%), Gaps = 8/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F G LP G PEIAF+GRSNVGKSSL+N L RK LARTS+ PGRTQ LNFF Sbjct: 40 FFWGAAARSQLPPEGAPEIAFAGRSNVGKSSLLNALTGRKTLARTSHTPGRTQELNFFA- 98 Query: 74 KDFSNLKNNLPA--MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 L + + M LVDMPGYGYA A K+ + +W L +L R L VY+LID R Sbjct: 99 -----LGPTIESARMRLVDMPGYGYAAASKEKIAAWTSLCRDFLRGRVPLLRVYVLIDGR 153 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K ID + LD+ A+SYQIVLTK D++ + + K + P A+P+VI T Sbjct: 154 HGLKPIDSETLDLLDQSAISYQIVLTKRDEVKKSEQAARIASVKAALAKRPAAYPDVIFT 213 Query: 192 SSVKRKGIEVLRKAI 206 SS +GI LR AI Sbjct: 214 SSQSGEGIADLRAAI 228 >gi|255262598|ref|ZP_05341940.1| ribosome biogenesis GTP-binding protein YsxC [Thalassiobium sp. R2A62] gi|255104933|gb|EET47607.1| ribosome biogenesis GTP-binding protein YsxC [Thalassiobium sp. R2A62] Length = 217 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 87/193 (45%), Positives = 120/193 (62%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP E+ F+GRSNVGKS+LIN L RK LAR SN PGRTQ +N+F Sbjct: 30 FVKGVVAMSGLPDPDRIEVCFAGRSNVGKSTLINALTGRKGLARASNTPGRTQEINYFTM 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYG+A AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 90 GEHGYL---------VDLPGYGFANAPLTVVEKWQRLLKQYLSGRQTLRRAFVLIDARHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ S LD AV++Q VLTK DK+ + +++ + + +P A+PE++ TSS Sbjct: 141 VKPVDDEIMSLLDSAAVTFQAVLTKADKVKLKERERIMDQVRGALAKHPAAYPEIVLTSS 200 Query: 194 VKRKGIEVLRKAI 206 K GI+ LR I Sbjct: 201 EKGDGIKTLRSII 213 >gi|192289065|ref|YP_001989670.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris TIE-1] gi|238692588|sp|B3QCI1|ENGB_RHOPT RecName: Full=Probable GTP-binding protein EngB gi|192282814|gb|ACE99194.1| GTP-binding protein HSR1-related [Rhodopseudomonas palustris TIE-1] Length = 216 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 99/200 (49%), Positives = 121/200 (60%), Gaps = 7/200 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P I LP G EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ L FF Sbjct: 21 WHFIWASPSIETLPPMGSVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFF 80 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + L+ LVDMPGYGYA A K V SW LI +L R+TL VY+LID R Sbjct: 81 EGPPNAGLR-------LVDMPGYGYAAASKAKVASWTSLIHHFLQGRATLARVYVLIDGR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K +D D+ LDK AVSYQIVLTK D++ E + T + +P A PEV+ T Sbjct: 134 HGLKDVDLDILKTLDKAAVSYQIVLTKADQVKAAELAERVTATVAALAKHPAAFPEVLTT 193 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS G+ LR A++ ++ Sbjct: 194 SSRTGAGMPELRAAMIRLLD 213 >gi|217977386|ref|YP_002361533.1| ribosome biogenesis GTP-binding protein YsxC [Methylocella silvestris BL2] gi|217502762|gb|ACK50171.1| GTP-binding protein HSR1-related [Methylocella silvestris BL2] Length = 226 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 94/195 (48%), Positives = 120/195 (61%), Gaps = 8/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + LP G PEIAF+GRSNVGKSSL+N L NRK+LARTS+ PGRT+ LNFF Sbjct: 29 FLWAASSVASLPPPGAPEIAFAGRSNVGKSSLLNALTNRKSLARTSHTPGRTRELNFF-- 86 Query: 74 KDFSNLKNNL--PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 L + + LVDMPGYGYA A K+ + SW L+ YL R+ L ++LID R Sbjct: 87 ----GLGGGIDDARLRLVDMPGYGYAAASKEQIASWTQLMQDYLRGRAPLLRAFVLIDGR 142 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K D ++ LD+ A+SYQIVLTK D++ A +E+T I P A+P+ I T Sbjct: 143 HGLKPPDYEMMDLLDRCALSYQIVLTKQDEVKEADAARRIEETLKAIEKRPAAYPQAIFT 202 Query: 192 SSVKRKGIEVLRKAI 206 SS G+ LR AI Sbjct: 203 SSRTADGVAELRAAI 217 >gi|39933708|ref|NP_945984.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris CGA009] gi|81564114|sp|Q6NC42|ENGB_RHOPA RecName: Full=Probable GTP-binding protein EngB gi|39647554|emb|CAE26075.1| possible GTPases [Rhodopseudomonas palustris CGA009] Length = 216 Score = 171 bits (434), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 99/200 (49%), Positives = 121/200 (60%), Gaps = 7/200 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P I LP G EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ L FF Sbjct: 21 WHFIWASPSIETLPPMGSVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFF 80 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + L+ LVDMPGYGYA A K V SW LI +L R+TL VY+LID R Sbjct: 81 EGPPNAGLR-------LVDMPGYGYAAASKAKVASWTSLIHHFLQGRATLARVYVLIDGR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K +D D+ LDK AVSYQIVLTK D++ E + T + +P A PEV+ T Sbjct: 134 HGLKDVDLDILKTLDKAAVSYQIVLTKADQVKAAELAERVTATVAALAKHPAAFPEVLTT 193 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS G+ LR A++ ++ Sbjct: 194 SSRTGAGMPELRAAMIRLLD 213 >gi|188581559|ref|YP_001925004.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium populi BJ001] gi|179345057|gb|ACB80469.1| GTP-binding protein HSR1-related protein [Methylobacterium populi BJ001] Length = 218 Score = 171 bits (433), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 92/176 (52%), Positives = 112/176 (63%), Gaps = 9/176 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ LNFF + L LVD Sbjct: 43 EIAFAGRSNVGKSSLINALTGRNTLARTSHTPGRTQQLNFF------RIGGRL---MLVD 93 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 MPGYGYA K V++W LI YL RS L VYLLID RHG+K+ID D+ LDK AV Sbjct: 94 MPGYGYAAVEKAKVEAWTKLIHAYLKGRSNLARVYLLIDSRHGLKEIDTDLLDGLDKAAV 153 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 SYQ+VLTK D L + ++ + + + P A+PEV+ TSS +G+ LR +I Sbjct: 154 SYQVVLTKGDALKKSEIEKRIAGIQAALAKRPAAYPEVLLTSSRDDRGVAELRASI 209 >gi|329848428|ref|ZP_08263456.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis biprosthecum C19] gi|328843491|gb|EGF93060.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis biprosthecum C19] Length = 215 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 94/202 (46%), Positives = 124/202 (61%), Gaps = 10/202 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F ++A F+ G ++ LP PE+AF+GRSNVGKSSLIN +V K LAR SN PGRT Sbjct: 17 LFARAA-TFVMGAAKVEQLPDTSQPEVAFAGRSNVGKSSLINAVVGMKALARASNEPGRT 75 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + +NFF N+ L LVD+PGYG+A+A K V + L YL R L+ Y Sbjct: 76 REVNFF------NVNGQL---HLVDLPGYGWAKASKVTVKKFQNLGRDYLRGRPNLKRAY 126 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K++D++ LD AVSYQIVLTK DK+ P + +E T+ ++ P AH Sbjct: 127 LLIDARHGLKEVDKEPMDALDVAAVSYQIVLTKADKIKPAELAKVIEATQAGVKKRPAAH 186 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P V+ TSS GI LR I+ Sbjct: 187 PLVLATSSETGFGIAELRAEIM 208 >gi|209965569|ref|YP_002298484.1| ribosome biogenesis GTP-binding protein YsxC [Rhodospirillum centenum SW] gi|209959035|gb|ACI99671.1| GTP-binding protein, putative [Rhodospirillum centenum SW] Length = 224 Score = 171 bits (432), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 111/193 (57%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F G P LP+A PE+ F+GRSNVGKSSL+N L R LARTS PGRTQ LNFF Sbjct: 33 FFWGAPAASELPEADLPEVCFAGRSNVGKSSLVNALTGRVTLARTSQTPGRTQQLNFF-- 90 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NL + L LVDMPGYGYA+ K+ +W YL R TLR +L+D RHG Sbjct: 91 ----NLGDRL---VLVDMPGYGYAKVSKETSSAWTDFAKSYLKGRVTLRRALVLVDSRHG 143 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D D+ +D+ AV+YQIVLTK DKL+ + +P AHPEV+ TSS Sbjct: 144 LKPQDIDMMKMMDQAAVAYQIVLTKADKLTDKALVHARAAVAAALVKHPAAHPEVMATSS 203 Query: 194 VKRKGIEVLRKAI 206 GI LR + Sbjct: 204 ESGLGIAELRATL 216 >gi|126728215|ref|ZP_01744031.1| GTP-binding protein [Sagittula stellata E-37] gi|126711180|gb|EBA10230.1| GTP-binding protein [Sagittula stellata E-37] Length = 216 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 87/193 (45%), Positives = 118/193 (61%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +N+F Sbjct: 29 FLKGVVAMDGLPPDDRAEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINYFTL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYG+A AP V W L+ YL+ R +LR ++LID RHG Sbjct: 89 GS---------ERYLVDLPGYGFANAPVAVVAKWQALLKAYLAGRVSLRRAFVLIDHRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ + LD+ AV++Q+V+TK DK+ + LE+ + + +P A+PE++ TSS Sbjct: 140 VKAVDNEIMTLLDRSAVTFQVVMTKADKVKGAEHDKILEQVRGQLAKHPAAYPEIVVTSS 199 Query: 194 VKRKGIEVLRKAI 206 K GI LR I Sbjct: 200 EKGDGIGTLRSII 212 >gi|85709447|ref|ZP_01040512.1| GTP-binding protein [Erythrobacter sp. NAP1] gi|85688157|gb|EAQ28161.1| GTP-binding protein [Erythrobacter sp. NAP1] Length = 229 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 90/194 (46%), Positives = 116/194 (59%), Gaps = 3/194 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP PE+AF GRSNVGKSSL+N L RK +AR S PGRTQ LNFF Sbjct: 27 FLLSAPQLKFLPDPICPEVAFCGRSNVGKSSLLNALTGRKAIARASVTPGRTQELNFF-- 84 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D P LVDMPGYG+A+AP K V+ W L+ YL R L +L+D RHG Sbjct: 85 -DVGGEPGGKPLFRLVDMPGYGFAKAPVKVVERWKNLVKSYLRGRPVLARNLVLVDSRHG 143 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ LD+ AV Y+IVLTK DK+ + + K R + A+PE+ TSS Sbjct: 144 LKDVDREMMKMLDEAAVGYRIVLTKTDKIKASELERVANKVADEARKHVAAYPELHLTSS 203 Query: 194 VKRKGIEVLRKAIL 207 K GIE LR A++ Sbjct: 204 EKGMGIEALRAAVV 217 >gi|114765425|ref|ZP_01444540.1| GTP-binding protein [Pelagibaca bermudensis HTCC2601] gi|114542268|gb|EAU45298.1| GTP-binding protein [Roseovarius sp. HTCC2601] Length = 217 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/193 (45%), Positives = 121/193 (62%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP E+ F+GRSNVGKSSLIN L RK +AR SN PGRTQ +NFF Sbjct: 30 FLKGVVGMDGLPPDDRVEVCFAGRSNVGKSSLINALTGRKGIARASNTPGRTQEINFFTL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A AP V+ W L+ +YLS R +LR ++LID RHG Sbjct: 90 GE---------ERYLVDLPGYGFANAPVAVVEKWQRLLKQYLSGRVSLRRAFVLIDARHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q VLTK DK+ ++ L + + + +P A PE++ TSS Sbjct: 141 VKPVDEEIMTLLDRSAVTFQAVLTKADKVKEKGREKVLAQVREKLAKHPAAFPELVLTSS 200 Query: 194 VKRKGIEVLRKAI 206 K GI +LR I Sbjct: 201 EKGDGIALLRAII 213 >gi|167644607|ref|YP_001682270.1| ribosome biogenesis GTP-binding protein YsxC [Caulobacter sp. K31] gi|167347037|gb|ABZ69772.1| GTP-binding protein HSR1-related [Caulobacter sp. K31] Length = 214 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 91/195 (46%), Positives = 119/195 (61%), Gaps = 9/195 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 +F+ G ++ +P A PE+AF+GRSNVGKSSLIN LV + +LAR SN+PGRT+ +NFF Sbjct: 23 CLFMMGAVKMDGMPTADFPEVAFAGRSNVGKSSLINGLVGQNHLARASNSPGRTREVNFF 82 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 V + + LVD+PGYG+AR K D + L YL R L+ VYLLID R Sbjct: 83 VLAE---------KLRLVDLPGYGFARVSKTVADKFQDLGRAYLRGRVNLKRVYLLIDAR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K +D + LD AVSYQIVLTK DK+ P + + T+ I P A P+V+ T Sbjct: 134 HGLKSVDTEALDALDVAAVSYQIVLTKADKIKPAEVEAVVAATQKAIAKRPAAFPKVLAT 193 Query: 192 SSVKRKGIEVLRKAI 206 SS K G+ LR I Sbjct: 194 SSEKGDGLPELRAEI 208 >gi|197103855|ref|YP_002129232.1| GTP-binding protein CgpA [Phenylobacterium zucineum HLK1] gi|196477275|gb|ACG76803.1| GTP-binding protein CgpA [Phenylobacterium zucineum HLK1] Length = 213 Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 94/194 (48%), Positives = 116/194 (59%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL G I LP PE+AF+GRSNVGKSSLIN + RK+LAR SN PGRT+ +NFFV Sbjct: 24 FLMGAVAISGLPDPDLPEVAFAGRSNVGKSSLINAVTGRKDLARASNEPGRTREVNFFVA 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYG+ARA K + L YL R L+ VYLLID RHG Sbjct: 84 DE---------KLRLVDLPGYGWARASKSVARKFQNLGRDYLRGRPNLKRVYLLIDARHG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D++ LD AVSYQIVLTK DKL ++ + +T + P A P V+ TSS Sbjct: 135 LKDVDKEALDALDVAAVSYQIVLTKADKLRAAEVEKVVAETLQKVSKRPAAFPRVLATSS 194 Query: 194 VKRKGIEVLRKAIL 207 K GI LR IL Sbjct: 195 EKGTGIPELRAEIL 208 >gi|86747808|ref|YP_484304.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris HaA2] gi|119369244|sp|Q2J2B7|ENGB_RHOP2 RecName: Full=Probable GTP-binding protein EngB gi|86570836|gb|ABD05393.1| GTP-binding [Rhodopseudomonas palustris HaA2] Length = 216 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/200 (48%), Positives = 123/200 (61%), Gaps = 7/200 (3%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTS+ PGRTQ L FF Sbjct: 21 WHFIWASPSIETLPPMDGLEVAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELIFF 80 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + L+ LVDMPGYGYA A K V SW LI ++L R+TL VY+LID R Sbjct: 81 DGPPGAGLR-------LVDMPGYGYAAASKAKVASWTSLIHKFLQGRATLARVYVLIDGR 133 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+K +D D+ LDK AVSYQIVLTK D++ E ++ T+ + +P A PE++ T Sbjct: 134 HGLKDVDLDILKTLDKAAVSYQIVLTKADQVKAAELAERVDATRTALAKHPAAFPELLTT 193 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS G+ LR A++ ++ Sbjct: 194 SSRTGAGMPELRAAMIRLLD 213 >gi|114569008|ref|YP_755688.1| ribosome biogenesis GTP-binding protein YsxC [Maricaulis maris MCS10] gi|119369211|sp|Q0ASI7|ENGB_MARMM RecName: Full=Probable GTP-binding protein EngB gi|114339470|gb|ABI64750.1| GTP-binding protein [Maricaulis maris MCS10] Length = 191 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 89/184 (48%), Positives = 116/184 (63%), Gaps = 8/184 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ E+AF+GRSNVGKSSLIN L N+K LAR S PGRT+ LNFF N++ Sbjct: 9 LPEPDRLEVAFAGRSNVGKSSLINALTNQKGLARASGEPGRTRELNFF------NVEGG- 61 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + +VD+PGYGYA+APK V+ W L +L R L+ VYLLID RHG+K +D + Sbjct: 62 -DLRIVDLPGYGYAKAPKPVVEKWTRLTKAFLRGRVNLKRVYLLIDSRHGLKDVDLKIMD 120 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 D+ AVSYQ+VLTK DK+ P + + +T I P A P VI TSS K+ G++ LR Sbjct: 121 VFDEAAVSYQVVLTKTDKIKPPAVKRLIGETGEKIARRPAAFPRVIATSSAKQDGVDQLR 180 Query: 204 KAIL 207 I+ Sbjct: 181 AEIV 184 >gi|296444655|ref|ZP_06886619.1| ribosome biogenesis GTP-binding protein YsxC [Methylosinus trichosporium OB3b] gi|296257923|gb|EFH04986.1| ribosome biogenesis GTP-binding protein YsxC [Methylosinus trichosporium OB3b] Length = 219 Score = 167 bits (423), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 91/183 (49%), Positives = 113/183 (61%), Gaps = 4/183 (2%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP GPPEIAF+GRSNVGKSSL+N L RK LAR SN PGRTQ LNFF + Sbjct: 32 LPPIGPPEIAFAGRSNVGKSSLLNALTGRKTLARVSNTPGRTQQLNFFA----VGAEPGA 87 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVDMPGYGYA K+ V SW L+ +L R++L V++LID R G+K++D+++ Sbjct: 88 EPLRLVDMPGYGYAAVGKEKVASWTRLMEDFLRGRASLARVFVLIDSRRGIKEMDEEMLD 147 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 LDK AVSYQIVLTK D+L L + + P A P+V TSS +GI LR Sbjct: 148 LLDKSAVSYQIVLTKRDELKLAERAAALAAAEAALAKRPAAFPQVAATSSRDGEGIAELR 207 Query: 204 KAI 206 I Sbjct: 208 AGI 210 >gi|296283113|ref|ZP_06861111.1| ribosome biogenesis GTP-binding protein YsxC [Citromicrobium bathyomarinum JL354] Length = 218 Score = 167 bits (423), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 87/194 (44%), Positives = 117/194 (60%), Gaps = 7/194 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP+ PEIA +GRSNVGKSSL+N L RK +AR S PGRTQ LN F Sbjct: 26 FLLSAPQLKFLPEPTVPEIALAGRSNVGKSSLLNALTMRKGIARASVTPGRTQELNIFEV 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVDMPGYG+A+APK V+ W ++ YL R L +L+D RHG Sbjct: 86 GQPTQFR-------LVDMPGYGFAKAPKSVVEKWQNVVRTYLRGRPVLARALVLVDSRHG 138 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + LD+ AV Y+IVLTK DK+ + ET +K + +P A+PE+ TS+ Sbjct: 139 LKDTDRAMMKMLDEAAVGYRIVLTKSDKIKASALAETHDKVAAEAKKHPAAYPEIHLTSA 198 Query: 194 VKRKGIEVLRKAIL 207 K +GI LR AI+ Sbjct: 199 EKGQGIAALRAAIV 212 >gi|163795446|ref|ZP_02189413.1| acetylglutamate kinase [alpha proteobacterium BAL199] gi|159179432|gb|EDP63963.1| acetylglutamate kinase [alpha proteobacterium BAL199] Length = 214 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 89/183 (48%), Positives = 110/183 (60%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G PE+AF+GRSNVGKSSL+N L RK+LARTSN PGRTQ L FF +L + L Sbjct: 36 LPPLGLPEVAFAGRSNVGKSSLVNALTGRKSLARTSNTPGRTQELIFF------DLGSRL 89 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ K V W + YL R++L V LLID RHG K ID + Sbjct: 90 ---QLVDLPGYGYAKVSKTKVQLWTDTLFAYLRGRTSLHRVNLLIDSRHGPKDIDNEAMD 146 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 D+ A+SYQI+LTK DK P+ E +E + P AHP++ TSS GI LR Sbjct: 147 LFDRAALSYQIILTKADKPKPSELAELIESLGAALAKRPAAHPQIRATSSFSGDGIAELR 206 Query: 204 KAI 206 + Sbjct: 207 AEL 209 >gi|329888536|ref|ZP_08267134.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas diminuta ATCC 11568] gi|328847092|gb|EGF96654.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas diminuta ATCC 11568] Length = 222 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 99/208 (47%), Positives = 122/208 (58%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F + A F+ G +I LP PEIAF+GRSNVGKSSLIN LV LAR SN Sbjct: 19 AARVLFARQAS-FVLGCAKIEQLPTPDLPEIAFAGRSNVGKSSLINGLVGMHKLARASNE 77 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+ +NFF +L M LVD+PGYG+A+A K V + L YL R TL Sbjct: 78 PGRTREVNFF------DLDGR---MRLVDLPGYGWAKASKTTVKKFQDLGRDYLRGRVTL 128 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + VYLLID RHG+K++D + LD AVSYQIVLTK DKL A++ T I Sbjct: 129 KRVYLLIDSRHGLKKVDDEALDALDLSAVSYQIVLTKADKLKKGEAEKVQAATLKAISKR 188 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 P A+P V TSS K G+ LR I+ T Sbjct: 189 PAAYPHVAVTSSEKGFGLPELRAEIMRT 216 >gi|170749902|ref|YP_001756162.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium radiotolerans JCM 2831] gi|170656424|gb|ACB25479.1| GTP-binding protein HSR1-related [Methylobacterium radiotolerans JCM 2831] Length = 217 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 92/183 (50%), Positives = 109/183 (59%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ LNFF + Sbjct: 35 LPPMEGVEIAFAGRSNVGKSSLINALTGRNTLARTSHTPGRTQQLNFFRIGE-------- 86 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++LVDMPGYGYA K V++W LI YL R+ L V++LID RHG K ID DV Sbjct: 87 -RLSLVDMPGYGYAAVEKAKVEAWTRLIHSYLKGRTNLARVFMLIDARHGFKSIDTDVLD 145 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 LDK AVSYQ+VLTK D L + + + P A+P+VI TSS G+ LR Sbjct: 146 GLDKAAVSYQVVLTKGDSLKKGEVASRIAGIEAGLAKRPAAYPQVILTSSRDDSGVPDLR 205 Query: 204 KAI 206 AI Sbjct: 206 AAI 208 >gi|149186359|ref|ZP_01864672.1| GTP-binding protein [Erythrobacter sp. SD-21] gi|148829948|gb|EDL48386.1| GTP-binding protein [Erythrobacter sp. SD-21] Length = 217 Score = 166 bits (419), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 85/194 (43%), Positives = 120/194 (61%), Gaps = 7/194 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP+ PEIAF+GRSNVGKSSL+N L R+ +AR S PGRTQ LNFF Sbjct: 26 FLLSAPQLKFLPEPTVPEIAFAGRSNVGKSSLLNALTGRRKIARASVTPGRTQELNFFEV 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + + LVDMPGYG+A+AP K V+ W L+ YL R L +L+D RHG Sbjct: 86 GEPTQFR-------LVDMPGYGFAKAPVKVVEKWKNLVKTYLRGRQVLVRNLVLVDSRHG 138 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ LD+ AV Y++VLTK DK+ + +T+ + + + A+P++ TSS Sbjct: 139 LKDVDREMMKMLDEAAVGYRVVLTKADKIKASELAKTVAAVEAEAKKHVAAYPQIHVTSS 198 Query: 194 VKRKGIEVLRKAIL 207 K GI LR A+L Sbjct: 199 EKGMGIGELRAALL 212 >gi|254419207|ref|ZP_05032931.1| GTPase, putative [Brevundimonas sp. BAL3] gi|196185384|gb|EDX80360.1| GTPase, putative [Brevundimonas sp. BAL3] Length = 217 Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/208 (47%), Positives = 120/208 (57%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F + A F+ G +I LP PEIAF+GRSNVGKSSLIN LV LAR SN Sbjct: 14 AARILFARPA-TFIMGAAKIEQLPDPDLPEIAFAGRSNVGKSSLINGLVGMHKLARASNE 72 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+ +NFF +L M LVD+PGYG+A+A K V + L YL R TL Sbjct: 73 PGRTREVNFF------DLDGR---MRLVDLPGYGWAKASKTTVRKFQDLGRDYLRGRVTL 123 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + VYLLID RHG+K +D++ LD AVSYQIVLTK DKL + E T I Sbjct: 124 KRVYLLIDSRHGLKSVDKEALDALDLAAVSYQIVLTKADKLKKGEGEAVQEATLKAISKR 183 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 P A P V TSS K G+ LR I+ T Sbjct: 184 PAAFPVVALTSSEKGLGLPELRAEIMRT 211 >gi|58040259|ref|YP_192223.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter oxydans 621H] gi|81556980|sp|Q5FPX9|ENGB_GLUOX RecName: Full=Probable GTP-binding protein EngB gi|58002673|gb|AAW61567.1| Probable GTP-binding protein EngB [Gluconobacter oxydans 621H] Length = 227 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 89/193 (46%), Positives = 117/193 (60%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F G +I LP G PE+AF+GRSNVGKSS+IN L R+ LAR S+ PGRT+ LNFF Sbjct: 27 FFFGSQKIDQLPPVGRPEVAFAGRSNVGKSSIINALTGRRALARASSEPGRTKQLNFF-- 84 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NL + L +LVDMPGYG+A+A K + W ++ YL R+TL V LL+D R Sbjct: 85 ----NLADRL---SLVDMPGYGFAKAAKSVKEDWQDMMFAYLRGRTTLERVILLLDARIE 137 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+DV LD+ AV +QIVLTK D++ P + + + L + A+P +I TSS Sbjct: 138 LKASDKDVMELLDRAAVVFQIVLTKCDQVKPKALAAKIAEVEALALKHAAAYPRIIATSS 197 Query: 194 VKRKGIEVLRKAI 206 GIE LR I Sbjct: 198 ETGFGIEDLRAEI 210 >gi|304570792|ref|YP_002516178.2| ribosome biogenesis GTP-binding protein YsxC [Caulobacter crescentus NA1000] Length = 229 Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 89/202 (44%), Positives = 121/202 (59%), Gaps = 9/202 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F F+ G + +P + PE+AF+GRSNVGKSSLIN LVN+K LAR SN PGRT Sbjct: 31 VFFAQPVSFIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRT 90 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + +NFF+ + + LVD+PGYG+AR + D + L YL R+ L+ VY Sbjct: 91 REINFFLLAE---------KVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVY 141 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K++D + LD AVSYQIVLTK DK+ P + + +T+ I A Sbjct: 142 VLIDARHGLKKVDLEALDALDVAAVSYQIVLTKADKIKPAEVDKVVAETQKAIAKRAAAF 201 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P V+ TSS K G+ LR I+ Sbjct: 202 PRVLATSSEKGLGMPELRAEIV 223 >gi|3820578|gb|AAC69623.1| GTP-binding protein [Caulobacter vibrioides] Length = 199 Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 88/194 (45%), Positives = 119/194 (61%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G + +P + PE+AF+GRSNVGKSSLIN LVN+K LAR SN PGRT+ +NFF+ Sbjct: 9 FIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRTRQINFFLL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYG+AR + D + L YL R+ L+ VY+LID RHG Sbjct: 69 AE---------KVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVYVLIDARHG 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D + LD AVSYQIVLTK DK+ P + + +T+ I A P V+ TSS Sbjct: 120 LKKVDLEALDALDVAAVSYQIVLTKADKIKPAEVDKVVAETQKAIAKRAAAFPRVLATSS 179 Query: 194 VKRKGIEVLRKAIL 207 K G+ LR I+ Sbjct: 180 EKGLGMPELRAEIV 193 >gi|16125019|ref|NP_419583.1| GTPase EngB [Caulobacter crescentus CB15] gi|13638031|sp|Q9ZG89|ENGB_CAUCR RecName: Full=GTP-binding protein EngB; AltName: Full=GTP-binding protein CgpA gi|254783191|sp|B8H1E7|ENGB_CAUCN RecName: Full=Probable GTP-binding protein EngB gi|13422003|gb|AAK22751.1| GTP-binding protein CgpA [Caulobacter crescentus CB15] gi|220962914|gb|ACL94270.1| GTP-binding protein YihA [Caulobacter crescentus NA1000] Length = 199 Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 88/194 (45%), Positives = 119/194 (61%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G + +P + PE+AF+GRSNVGKSSLIN LVN+K LAR SN PGRT+ +NFF+ Sbjct: 9 FIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRTREINFFLL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYG+AR + D + L YL R+ L+ VY+LID RHG Sbjct: 69 AE---------KVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVYVLIDARHG 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D + LD AVSYQIVLTK DK+ P + + +T+ I A P V+ TSS Sbjct: 120 LKKVDLEALDALDVAAVSYQIVLTKADKIKPAEVDKVVAETQKAIAKRAAAFPRVLATSS 179 Query: 194 VKRKGIEVLRKAIL 207 K G+ LR I+ Sbjct: 180 EKGLGMPELRAEIV 193 >gi|295690948|ref|YP_003594641.1| ribosome biogenesis GTP-binding protein YsxC [Caulobacter segnis ATCC 21756] gi|295432851|gb|ADG12023.1| ribosome biogenesis GTP-binding protein YsxC [Caulobacter segnis ATCC 21756] Length = 220 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 90/202 (44%), Positives = 119/202 (58%), Gaps = 9/202 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F F+ G + +P PE+AF+GRSNVGKSSLIN LVN+K LAR SN PGRT Sbjct: 22 VFFAQPVSFIMGAVRMDAMPAPDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRT 81 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + +NFF+ + + LVD+PGYG+AR + D + L YL R+ L+ VY Sbjct: 82 REINFFLLAE---------QVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVY 132 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K++D + LD AVSYQIVLTK DK+ P + + T I P A Sbjct: 133 VLIDARHGLKKVDLEALDALDVAAVSYQIVLTKSDKIKPAEVDKVVADTLKAIAKRPAAF 192 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P V+ TSS K G+ LR I+ Sbjct: 193 PRVLATSSEKGLGLPELRAEIV 214 >gi|294085068|ref|YP_003551828.1| GTP-binding protein, HSR1-like protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664643|gb|ADE39744.1| GTP-binding protein, HSR1-related protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 219 Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G PEI F+GRSNVGKSSL+N L R+ LARTS PGRT+ L FF +L L Sbjct: 39 LPPMGLPEICFAGRSNVGKSSLVNALTGRRMLARTSQTPGRTRQLIFF------DLGQRL 92 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA APK ++++W L ++L+ R +L+ V+LLID R GV + D ++ Sbjct: 93 ---GLVDLPGYGYASAPKTDIEAWTKLTRKFLAGRQSLQRVFLLIDARRGVGKGDSEIMK 149 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 LD+ AVS+ VLTK DKL P ++ T+ + + A+PE+ TSS GIE LR Sbjct: 150 LLDESAVSWAAVLTKADKLKPEALEKVCRATEATVATHVAAYPELFVTSSQAGDGIEHLR 209 Query: 204 KAI 206 I Sbjct: 210 GHI 212 >gi|258541763|ref|YP_003187196.1| ribosome biogenesis GTP-binding protein YsxC [Acetobacter pasteurianus IFO 3283-01] gi|256632841|dbj|BAH98816.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01] gi|256635898|dbj|BAI01867.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-03] gi|256638953|dbj|BAI04915.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-07] gi|256642007|dbj|BAI07962.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-22] gi|256645062|dbj|BAI11010.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-26] gi|256648117|dbj|BAI14058.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-32] gi|256651170|dbj|BAI17104.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654161|dbj|BAI20088.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-12] Length = 227 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 91/195 (46%), Positives = 117/195 (60%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G ++G LP PEIAF+GRSNVGKSSL+N L RK LAR S+ PGRT+ LNFF Sbjct: 35 FVFGAQKLGQLPPQTLPEIAFAGRSNVGKSSLVNALTGRKTLARASSEPGRTKQLNFF-- 92 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NL + L LVDMPGYGYA+A K + W ++ YL R +L+ V LL+D R Sbjct: 93 ----NLADRL---MLVDMPGYGYAKAAKSVKEDWQDMMFDYLRGRPSLQRVVLLLDARVE 145 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D +V LDK AVS+Q+VLTK D + P + + IR +P A P + TSS Sbjct: 146 MKAHDLEVMDLLDKAAVSFQVVLTKCDSVKPGPLARKQAEVEAEIRRHPAAFPYLSLTSS 205 Query: 194 VKRKGIEVLRKAILE 208 +GIE LR + E Sbjct: 206 QTGEGIEGLRAELAE 220 >gi|329114453|ref|ZP_08243215.1| Putative GTP-binding protein EngB [Acetobacter pomorum DM001] gi|326696529|gb|EGE48208.1| Putative GTP-binding protein EngB [Acetobacter pomorum DM001] Length = 227 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 91/195 (46%), Positives = 116/195 (59%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G +G LP PEIAF+GRSNVGKSSL+N L RK LAR S+ PGRT+ LNFF Sbjct: 35 FVFGAQRLGQLPPQTLPEIAFAGRSNVGKSSLVNALTGRKTLARASSEPGRTKQLNFF-- 92 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NL + L LVDMPGYGYA+A K + W ++ YL R +L+ V LL+D R Sbjct: 93 ----NLADRL---MLVDMPGYGYAKAAKSVKEDWQDMMFDYLRGRPSLQRVVLLLDARVE 145 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D +V LDK AVS+Q+VLTK D + P + + IR +P A P + TSS Sbjct: 146 MKAHDLEVMDLLDKAAVSFQVVLTKCDSVKPGPLARKQAEVEAEIRRHPAAFPYLSLTSS 205 Query: 194 VKRKGIEVLRKAILE 208 +GIE LR + E Sbjct: 206 QTGEGIEGLRAELAE 220 >gi|220925224|ref|YP_002500526.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium nodulans ORS 2060] gi|219949831|gb|ACL60223.1| GTP-binding protein HSR1-related [Methylobacterium nodulans ORS 2060] Length = 216 Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 95/183 (51%), Positives = 111/183 (60%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ LNFF +L L Sbjct: 35 LPPMQGHEIAFAGRSNVGKSSLINSLTGRTTLARTSHTPGRTQQLNFF------DLGGKL 88 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVDMPGYGYA K V +W LI YL R+ L VY+LID RHG+K D +V Sbjct: 89 ---TLVDMPGYGYAAVSKAKVAAWTELIHAYLQGRANLARVYVLIDARHGIKPNDGEVLD 145 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 LD AVSYQIVLTK D L + Q L+ T + P A+PE+I TSS +GI LR Sbjct: 146 ELDAAAVSYQIVLTKGDALKKSEIQARLDATSAALARRPAAYPEIILTSSRTGEGIAELR 205 Query: 204 KAI 206 ++ Sbjct: 206 ASV 208 >gi|302381827|ref|YP_003817650.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas subvibrioides ATCC 15264] gi|302192455|gb|ADL00027.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas subvibrioides ATCC 15264] Length = 213 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 96/209 (45%), Positives = 119/209 (56%), Gaps = 12/209 (5%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F + A F+ G +I LP+ PEIAF+GRSNVGKSSLIN LV LAR SN Sbjct: 11 AARVLFARPA-TFVMGAAKIEQLPEPDLPEIAFAGRSNVGKSSLINGLVGMHKLARASNE 69 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRT+ +NFF +L A + LVD+PGYG+A+A K V + L YL R T Sbjct: 70 PGRTREVNFF----------DLDAKLRLVDLPGYGWAKASKSTVRQFQNLGRDYLRGRVT 119 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ VYLLID RHG+K +D + LD AVSYQIVLTK DK+ T I Sbjct: 120 LKRVYLLIDARHGLKSVDTEALDALDLAAVSYQIVLTKADKIKAHERDTVQAATLKAISK 179 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILET 209 P A P V TS+ K G+ LR I+ T Sbjct: 180 RPAAFPAVAVTSAEKGLGLPELRAEIMRT 208 >gi|330993394|ref|ZP_08317329.1| putative GTP-binding protein engB [Gluconacetobacter sp. SXCC-1] gi|329759424|gb|EGG75933.1| putative GTP-binding protein engB [Gluconacetobacter sp. SXCC-1] Length = 221 Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 87/198 (43%), Positives = 116/198 (58%), Gaps = 9/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G ++G LP PEIAF+GRSNVGKSSLIN L R+ LAR S+ PGRT+ LNFF Sbjct: 30 FVFGAQKLGQLPDPILPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLNFF-- 87 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + L LVDMPGYG+A+A + + W G++ YL R TLR V LL+D R Sbjct: 88 ----EMAHRL---TLVDMPGYGFAKAARAVKEDWQGMMFSYLRGRPTLRRVVLLLDSRVE 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK D+++ LD+ AV++Q+VLTK D P L + ++ + A P V+ TSS Sbjct: 141 VKASDREIMKMLDRAAVTFQVVLTKCDVPKPNALAAKLREVSEIVATHAAAFPHVLATSS 200 Query: 194 VKRKGIEVLRKAILETIN 211 GIE LR + N Sbjct: 201 ETGLGIEDLRAELARLAN 218 >gi|162147918|ref|YP_001602379.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter diazotrophicus PAl 5] gi|209542535|ref|YP_002274764.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter diazotrophicus PAl 5] gi|161786495|emb|CAP56077.1| GTP-binding protein engB [Gluconacetobacter diazotrophicus PAl 5] gi|209530212|gb|ACI50149.1| GTP-binding protein HSR1-related [Gluconacetobacter diazotrophicus PAl 5] Length = 223 Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 87/186 (46%), Positives = 111/186 (59%), Gaps = 9/186 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F G ++ LP G PEIAF+GRSNVGKSSLIN L R+ LAR S+ PGRT+ LNFF Sbjct: 31 FFFGAQKLEQLPPPGAPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLNFF-- 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L L LVDMPGYGYARA K + W G++ YL R TL+ V LL+D R Sbjct: 89 ----DLGGRL---TLVDMPGYGYARAAKDVKEDWQGMMFAYLRGRPTLQRVILLLDSRIE 141 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+++ + LD+ AV++QIVLTK D P + + L R +P A+P TSS Sbjct: 142 LKASDREIMTLLDRAAVTFQIVLTKCDAPRPGALEAKRSQAADLARQHPAAYPGTFATSS 201 Query: 194 VKRKGI 199 GI Sbjct: 202 DTGLGI 207 >gi|296115060|ref|ZP_06833702.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter hansenii ATCC 23769] gi|295978397|gb|EFG85133.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter hansenii ATCC 23769] Length = 235 Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 85/195 (43%), Positives = 119/195 (61%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G ++G LP PEIAF+GRSNVGKSSL+N L R+ LAR S+ PGRT+ LNFF Sbjct: 41 FVFGAQKLGQLPDPLLPEIAFAGRSNVGKSSLVNALTGRRTLARASSEPGRTKQLNFF-- 98 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L L LVDMPGYG+A+A K + W G++ +L R TL+ V LL+D R Sbjct: 99 ----ELAGRL---TLVDMPGYGFAKAAKAVKEDWQGMMFSFLRGRPTLKRVVLLLDSRVE 151 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+++ LD+ AV++QIVLTK D P L +T+ + ++ A+P V+ TSS Sbjct: 152 IKESDREIMKLLDRAAVTFQIVLTKCDIPKPPVLAAKLRETREIAASHAAAYPLVLVTSS 211 Query: 194 VKRKGIEVLRKAILE 208 +GI LR + + Sbjct: 212 ANGEGIVELRAELAQ 226 >gi|170743187|ref|YP_001771842.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium sp. 4-46] gi|168197461|gb|ACA19408.1| GTP-binding protein HSR1-related [Methylobacterium sp. 4-46] Length = 216 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 92/176 (52%), Positives = 107/176 (60%), Gaps = 9/176 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ LNFF +L L LVD Sbjct: 42 EIAFAGRSNVGKSSLINALTGRNTLARTSHTPGRTQQLNFF------DLGGKL---TLVD 92 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 MPGYGYA K V SW LI YL R+ L VY+LID RHG+K D +V LD AV Sbjct: 93 MPGYGYAAVSKAKVASWTELIHAYLQGRANLARVYVLIDARHGIKPNDGEVLDELDAAAV 152 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 SYQ+VLTK D L L+ T + P A+PE+I TSS +GI LR ++ Sbjct: 153 SYQVVLTKGDDLKKGEVASRLDATAAALARRPAAYPEIILTSSRTGEGIPALRASV 208 >gi|296535612|ref|ZP_06897792.1| ribosome biogenesis GTP-binding protein YsxC [Roseomonas cervicalis ATCC 49957] gi|296264067|gb|EFH10512.1| ribosome biogenesis GTP-binding protein YsxC [Roseomonas cervicalis ATCC 49957] Length = 221 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 85/183 (46%), Positives = 109/183 (59%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+A PE+AF GRSNVGKSSL+N L + +LAR S+ PGRT+ LNFF +L L Sbjct: 41 LPEARLPEVAFCGRSNVGKSSLVNALTGQNSLARVSSTPGRTKQLNFF------DLGGRL 94 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ALVDMPGYGYA+A K + W GL+ +L R LR V LL+D R K D+ Sbjct: 95 ---ALVDMPGYGYAQASKSVKEDWQGLMFEFLRGRPVLRRVVLLLDARIETKASDRAAME 151 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L+ AV++QIVLTK D P ++ E+ L++ + AHP VI TSS GI LR Sbjct: 152 LLNNAAVNFQIVLTKADSAKPYWLKQRQEEAAALVKQHTAAHPLVITTSSETGAGIPELR 211 Query: 204 KAI 206 + Sbjct: 212 AEL 214 >gi|218670936|ref|ZP_03520607.1| GTPase EngB [Rhizobium etli GR56] Length = 120 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 69/108 (63%), Positives = 82/108 (75%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+F Sbjct: 13 WIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 VP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+ Sbjct: 73 VPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRA 120 >gi|82948297|dbj|BAE53161.1| GTP-binding protein engB [Magnetospirillum magneticum AMB-1] Length = 162 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 83/164 (50%), Positives = 98/164 (59%), Gaps = 9/164 (5%) Query: 40 VGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA 99 +GKSSLIN L R LARTSN PGRTQ LNFF NL L LVDMPGYG+A+A Sbjct: 1 MGKSSLINALTGRNTLARTSNTPGRTQELNFF------NLGGRL---ILVDMPGYGFAQA 51 Query: 100 PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKI 159 PK V+ W L+ +L RS LR +L+D RHG+K D+D+ LDK AV YQ+VLTK Sbjct: 52 PKGLVEKWTRLVNGFLKGRSVLRRAVVLVDSRHGLKDSDRDMMKMLDKAAVVYQVVLTKA 111 Query: 160 DKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 DKL +T I+ AHP +I TSS K GI LR Sbjct: 112 DKLKAAELDAVQARTLEEIKGRVAAHPHLIVTSSEKGTGIPELR 155 >gi|148261133|ref|YP_001235260.1| GTPase EngB [Acidiphilium cryptum JF-5] gi|326404534|ref|YP_004284616.1| GTP-binding protein EngB [Acidiphilium multivorum AIU301] gi|146402814|gb|ABQ31341.1| tRNA modification GTPase trmE [Acidiphilium cryptum JF-5] gi|325051396|dbj|BAJ81734.1| GTP-binding protein EngB [Acidiphilium multivorum AIU301] Length = 209 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 88/201 (43%), Positives = 108/201 (53%), Gaps = 9/201 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + A F GL P+ EIA +GRSNVGKS+LIN + + LAR + APGRT Sbjct: 13 LFARGARFFHAAQTAEGL-PEPEGIEIALAGRSNVGKSTLINAITGQVALARVAQAPGRT 71 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + LNFF D + +VDMPGYGYA APK W GL+ RYL R LR V Sbjct: 72 RQLNFFRIGDGP--------LTIVDMPGYGYAAAPKAVKRDWQGLMFRYLRGRPNLRRVL 123 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LL+D R K D V LD+ AVS+Q+VLTK DK+ P L + R +P A Sbjct: 124 LLMDARIEDKPADHAVMELLDQAAVSFQVVLTKADKMKPEALASKLASIGAIARRHPAAL 183 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 EV+ TS GI LR I Sbjct: 184 NEVLVTSGETGAGIAELRAVI 204 >gi|114797282|ref|YP_759145.1| ribosome biogenesis GTP-binding protein YsxC [Hyphomonas neptunium ATCC 15444] gi|119369205|sp|Q0C548|ENGB_HYPNA RecName: Full=Probable GTP-binding protein EngB gi|114737456|gb|ABI75581.1| GTP-binding protein [Hyphomonas neptunium ATCC 15444] Length = 220 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 84/194 (43%), Positives = 112/194 (57%), Gaps = 8/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ GV + LP A E+ F+GRSNVGKSSLIN L R LAR+S PGRT+ LN+F Sbjct: 27 FVMGVVSLSGLPPADRSEVCFAGRSNVGKSSLINALTGRAKLARSSAEPGRTRELNYFDI 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L LVD+PG+GYA+ K +W LI YL R +LR V+LL+D R G Sbjct: 87 GDEGKLY-------LVDLPGFGYAKVSKTQTAAWTKLIKSYLRGRPSLRRVFLLVDARRG 139 Query: 134 -VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D++V +D AV+YQ+VLTK+DK+ ++ + K ++ AHP V TS Sbjct: 140 DLMDTDEEVMDLMDGAAVTYQVVLTKVDKVPKGEVEKIVVKIADKLKKRGAAHPVVRMTS 199 Query: 193 SVKRKGIEVLRKAI 206 + K GI LR I Sbjct: 200 AEKGFGIPELRAEI 213 >gi|114327391|ref|YP_744548.1| ribosome biogenesis GTP-binding protein YsxC [Granulibacter bethesdensis CGDNIH1] gi|119369200|sp|Q0BU77|ENGB_GRABC RecName: Full=Probable GTP-binding protein EngB gi|114315565|gb|ABI61625.1| GTP-binding protein YihA [Granulibacter bethesdensis CGDNIH1] Length = 223 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 91/193 (47%), Positives = 110/193 (56%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F G + LP EIAF+GRSNVGKS+L+N L RK LAR S+ PGRT+ LNFF Sbjct: 35 FFHGTQRLDQLPPPMGVEIAFAGRSNVGKSTLVNALTGRKTLARASSQPGRTKQLNFF-- 92 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NL + L LVDMPGYGYA+A K + W GL+ YL R LR V LL+D R Sbjct: 93 ----NLADQL---VLVDMPGYGYAQAAKDVKEDWQGLMFSYLRGRPNLRRVMLLVDARVE 145 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K D V LDK AV++Q+V+TK D + PT Q + R +P AHP V TSS Sbjct: 146 FKASDIAVMELLDKAAVTFQLVVTKADAVKPTPLQRRVADVYAAARAHPAAHPHVFVTSS 205 Query: 194 VKRKGIEVLRKAI 206 GI LR A+ Sbjct: 206 DTGSGIAELRAAL 218 >gi|317057122|ref|YP_004105589.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 7] gi|315449391|gb|ADU22955.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 7] Length = 255 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/205 (41%), Positives = 118/205 (57%), Gaps = 16/205 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ +I G ++ +P++ PE AFSGRSNVGKSSLIN + NRKN+AR S+ PG+T Sbjct: 26 FNKAEFITSYG--KLSQIPESDRPEFAFSGRSNVGKSSLINKIFNRKNMARVSSVPGKTV 83 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVY 125 +NFF +D + VD+PGYGYA K WG LI YL++ L V+ Sbjct: 84 TINFFSVED----------VYFVDLPGYGYANVSKGEKKGWGDLIGGYLADFDRDLELVF 133 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LID RH + D + ++L + + IVLTK DKL PT +E +E K I + H Sbjct: 134 QLIDMRHAPSKDDIQMINYLIDNEIPFVIVLTKADKLKPTARKERMEAFKDEIPYFEDIH 193 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 IP S+V +G++ L KAI+E I Sbjct: 194 --CIPFSAVTGEGVDEL-KAIIEEI 215 >gi|320353916|ref|YP_004195255.1| ribosome biogenesis GTP-binding protein YsxC [Desulfobulbus propionicus DSM 2032] gi|320122418|gb|ADW17964.1| ribosome biogenesis GTP-binding protein YsxC [Desulfobulbus propionicus DSM 2032] Length = 209 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 72/150 (48%), Positives = 99/150 (66%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL IG LP P+IAF+GRSNVGKSSL+N LV+R NL +TS+ PG+TQ LN+F+ Sbjct: 9 FLLSAHAIGQLPAPVYPDIAFAGRSNVGKSSLLNRLVDRSNLVKTSSKPGKTQSLNYFLV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ ++ LVD+PGYGYA+ ++ SW GLI Y++ RSTL CV ++ID RH Sbjct: 69 EE---------SLYLVDLPGYGYAQVSQQTRQSWQGLITEYVTTRSTLACVVVIIDLRHE 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +KQ+D+++ +L Y V TK DKLS Sbjct: 120 LKQLDRELVDWLRYLDTPYLPVYTKADKLS 149 >gi|225573069|ref|ZP_03781824.1| hypothetical protein RUMHYD_01260 [Blautia hydrogenotrophica DSM 10507] gi|225039575|gb|EEG49821.1| hypothetical protein RUMHYD_01260 [Blautia hydrogenotrophica DSM 10507] Length = 202 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/177 (42%), Positives = 110/177 (62%), Gaps = 11/177 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PEIAF+G+SNVGKSSLIN L+NRK+LARTS+ PG+TQ +NF+ D Sbjct: 18 LPENEWPEIAFAGKSNVGKSSLINALMNRKSLARTSSQPGKTQTINFYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 M LVD+PGYGYA+ + + WG LI RYL LR V+LLID RH + D+ ++ Sbjct: 70 -CMYLVDLPGYGYAKVAQSEKEKWGKLIERYLHSSKMLRAVFLLIDIRHEPSKNDKMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ + I+ TK+DKL + Q+ ++ + + P + +VIP S+V ++G E Sbjct: 129 WIVAQGYEPIIIATKLDKLKRSQVQKHVKMVRQGLSLLPGS--QVIPFSAVTKQGRE 183 >gi|325180055|emb|CCA14457.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 318 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/188 (41%), Positives = 112/188 (59%), Gaps = 13/188 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSN GKSSLIN ++ + L RTS PGRTQ LNFF K +L Sbjct: 123 LPAWNIPEVAFAGRSNCGKSSLINAILGQPGLVRTSKTPGRTQLLNFF---SVGGKKGSL 179 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDV 141 PAM++VDMPGYG+A+ PK VD+W L+ Y+ R L+ +++L+D R G+ +DQ+ Sbjct: 180 PAMSVVDMPGYGFAKPPKDVVDTWDKLVGGYIERRQAGLLKNLFVLLDARRGITTLDQEF 239 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 FL++ YQI+ TKID + PT +E L + R +P V+ TS+ + Sbjct: 240 LDFLEEMESLYQIIFTKIDAV-PTAELEKNIREVLNMKELFSRR--GMNPIVLATSTKES 296 Query: 197 KGIEVLRK 204 GI +++ Sbjct: 297 FGIRQMQQ 304 >gi|299473548|emb|CBN77943.1| YihA5, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 690 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 10/183 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 KA PE+ F GRSNVGKSSL+N+LVNRK LA TS PG TQH N++ + + P+ Sbjct: 469 KAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYYA---VNKGRRKSPS 525 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD+PG GYARA +DSW + RYL R LR V+ LID R G+++ D+ + S + Sbjct: 526 FFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGRTGLQKADEQLISLM 585 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVKRKG-I 199 ++ SY +V+TK DK++ + EK + + +P P VIPTS+ R+G + Sbjct: 586 MNENEGRSSYVVVVTKCDKVNDKKLKGVTEKVRQTLDKNGFPKTTP-VIPTSAKSRQGRV 644 Query: 200 EVL 202 E+L Sbjct: 645 ELL 647 >gi|327404186|ref|YP_004345024.1| GTP-binding protein engB [Fluviicola taffensis DSM 16823] gi|327319694|gb|AEA44186.1| GTP-binding protein engB [Fluviicola taffensis DSM 16823] Length = 204 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/198 (42%), Positives = 115/198 (58%), Gaps = 13/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ +I L P G PE AF GRSNVGKSSLIN+LV +K++A+TS PG+TQ +N F Sbjct: 8 FIISNTDIKLCPTDGKPEYAFIGRSNVGKSSLINMLVEKKDMAKTSGRPGKTQLINHF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L NN LVD+PGYGYA+A K + + W I ++L+ R TL ++LID R Sbjct: 66 -----LINN--EWYLVDLPGYGYAKASKSSRNQWEKFISQFLTRRETLINTFVLIDSRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + S+ ++ + + IV TKIDKLS + Q+ L K + Y A P V TSS Sbjct: 119 PQKIDIEFMSWCAEEQLPFSIVFTKIDKLSSSALQKNLAAYKKEMLKYWEALPPVFTTSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 G R+ IL I+ Sbjct: 179 ESHFG----REKILNYID 192 >gi|150388895|ref|YP_001318944.1| GTP-binding protein, HSR1-related [Alkaliphilus metalliredigens QYMF] gi|166920106|sp|A6TM67|ENGB_ALKMQ RecName: Full=Probable GTP-binding protein EngB gi|149948757|gb|ABR47285.1| GTP-binding protein, HSR1-related [Alkaliphilus metalliredigens QYMF] Length = 208 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 81/185 (43%), Positives = 112/185 (60%), Gaps = 17/185 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P+ G PEIA +GRSNVGKSSLIN ++NRK LAR S++PG+T+ LNF+ + K+F Sbjct: 19 PEEGLPEIALAGRSNVGKSSLINTILNRKKLARVSSSPGKTRTLNFYLINKEFH------ 72 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYAR K SWG ++ YLS R L V LLID RH + DQ ++ Sbjct: 73 ----LVDLPGYGYARVSKGEKSSWGKMLETYLSNRPNLYEVVLLIDIRHEPSEQDQQMYQ 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEV 201 ++ +V TK DK++ + Q+ + +IR+ PE +IP SS+K+ GIE Sbjct: 129 WIRHYGYGTIVVATKSDKIARSQHQKHFK----MIRDTLGMSPEDRLIPISSLKKLGIEQ 184 Query: 202 LRKAI 206 L A+ Sbjct: 185 LWGAL 189 >gi|307546852|ref|YP_003899331.1| GTPase EngB [Halomonas elongata DSM 2581] gi|307218876|emb|CBV44146.1| GTPase EngB [Halomonas elongata DSM 2581] Length = 206 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 8/187 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + P E+AF+GRSN GKSS IN+L +K LARTS PGRTQ +NFF Sbjct: 11 FLTSAPTLAQCPADTGAEVAFAGRSNAGKSSAINVLTRQKALARTSKTPGRTQLINFFTL 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + L+ LVD+PGYGYA+ P W + YL R++LR + LL+D RH Sbjct: 71 GDDTELR-------LVDLPGYGYAKVPDSVKLEWQRHLADYLQRRTSLRGLVLLMDVRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + DQ + + D++ + I+LTK DKL A+ L++ + +R + + S+ Sbjct: 124 LTEFDQTMLGWADEQDMPVHILLTKADKLKSGAAKNALQQVRSQLREWEDL-VSIQLFSA 182 Query: 194 VKRKGIE 200 +K++GIE Sbjct: 183 LKKQGIE 189 >gi|332828393|gb|EGK01102.1| GTP-binding protein engB [Dysgonomonas gadei ATCC BAA-286] Length = 198 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 111/188 (59%), Gaps = 12/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE AF GRSNVGKSSLIN+L NRK LA TS+ PG+TQ +N F+ D Sbjct: 19 PQDGKPEYAFIGRSNVGKSSLINMLTNRKGLAMTSSKPGKTQLINHFIIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K+ D +I Y+ R+ L C++LL+DCRH +QID + ++ Sbjct: 70 EWYLVDLPGYGYAQRGKEGRDQIRKIIDSYIINRAELTCLFLLLDCRHEPQQIDIEFMNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L ++ V + IV TKIDKLS ++ +E ++ P + +S+ R G E+L Sbjct: 130 LGEEGVPFVIVFTKIDKLSKGALKKNMEAYTDTLKETWEEIPPIFYSSAEHRLGADEIL- 188 Query: 204 KAILETIN 211 +E IN Sbjct: 189 -GYIEQIN 195 >gi|42520140|ref|NP_966055.1| GTPase EngB [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652806|sp|Q73IC3|ENGB_WOLPM RecName: Full=Probable GTP-binding protein EngB gi|42409877|gb|AAS13989.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 197 Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 73/167 (43%), Positives = 102/167 (61%), Gaps = 8/167 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G +I LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +NF+ Sbjct: 11 FIFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSM 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGY+ A K+ + + LI YL +R LR V++LID + G Sbjct: 71 YD--------DKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRENLRRVFVLIDSKVG 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 +K+ID+D +L +++ IVLTKIDK+S + +E + I N Sbjct: 123 LKEIDKDFIYWLIYNNINFNIVLTKIDKVSQKSLGAVIEDIQKWINN 169 >gi|86140633|ref|ZP_01059192.1| GTP-binding protein [Leeuwenhoekiella blandensis MED217] gi|85832575|gb|EAQ51024.1| GTP-binding protein [Leeuwenhoekiella blandensis MED217] Length = 202 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 92/162 (56%), Gaps = 9/162 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + PK PE AF GRSNVGKSSLIN+L +RKNLA+TS PG+TQ +N FV Sbjct: 8 FLVSNSNVAKCPKNKMPEYAFIGRSNVGKSSLINMLTDRKNLAKTSGRPGKTQLINHFVI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYAR KK + I +Y ER L ++LIDCRH Sbjct: 68 NQ---------TWYLVDLPGYGYARVSKKVKKEFQKFITQYFEEREQLVSAFVLIDCRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + ID++ +L +K + + I+ TK DKL P + +E K Sbjct: 119 PQPIDREFMQYLGEKQIPFSIIFTKADKLKPKALERNIENYK 160 >gi|224368192|ref|YP_002602355.1| EngB [Desulfobacterium autotrophicum HRM2] gi|259645891|sp|C0QLA5|ENGB_DESAH RecName: Full=Probable GTP-binding protein EngB gi|223690908|gb|ACN14191.1| EngB [Desulfobacterium autotrophicum HRM2] Length = 194 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/141 (51%), Positives = 96/141 (68%), Gaps = 9/141 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSNVGKSSLIN L+NRK+L +TS+ PG TQ +NFF+ L NL +LVD Sbjct: 25 EVAFAGRSNVGKSSLINTLINRKSLVKTSSKPGCTQLINFFL------LNGNL---SLVD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ KK WG +I RYL+ R TLR + LLID R ++ + D+ ++ A+ Sbjct: 76 LPGYGYAKVSKKIRAQWGPMIERYLTVRETLRAIVLLIDMRREPQREELDLINWFTAHAI 135 Query: 151 SYQIVLTKIDKLSPTTAQETL 171 Y+IVLTK DKLS T Q+ + Sbjct: 136 PYRIVLTKADKLSKTKQQKNI 156 >gi|88658079|ref|YP_507406.1| GTPase EngB [Ehrlichia chaffeensis str. Arkansas] gi|119369195|sp|Q2GGM7|ENGB_EHRCR RecName: Full=Probable GTP-binding protein EngB gi|88599536|gb|ABD45005.1| GTP-binding protein EngB [Ehrlichia chaffeensis str. Arkansas] Length = 200 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/207 (41%), Positives = 119/207 (57%), Gaps = 14/207 (6%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 TI +K F+ G I LP PEIA +GRSNVGKSSLIN + N K A+TS+ PG Sbjct: 5 TIMSKCE--FMIGATHIKSLPDFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSKPGC 62 Query: 65 TQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 T+ +NF+ + KDF M LVD+PGYGY++A K ++++ L+ YL L Sbjct: 63 TKQINFYLINKDF---------MVLVDLPGYGYSKADKTTINNYLCLMEYYLLNSRNLLK 113 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 V LLID + G K+ID D ++L+ + YQ+VLTKIDK+ + K L ++ Sbjct: 114 VILLIDAKVGFKEIDLDFINWLELHQIHYQLVLTKIDKIKKEMLDVNVNYIKNLNLDF-I 172 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETI 210 +P +I TSS ++GIE L I + I Sbjct: 173 MYP-IISTSSQCKQGIEELIYEIAQCI 198 >gi|302335290|ref|YP_003800497.1| ribosome biogenesis GTP-binding protein YsxC [Olsenella uli DSM 7084] gi|301319130|gb|ADK67617.1| ribosome biogenesis GTP-binding protein YsxC [Olsenella uli DSM 7084] Length = 194 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 110/189 (58%), Gaps = 13/189 (6%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G LP+ PE+AF+GRSNVGKSSL+N LV RK LAR S+ PG+T ++NFF Sbjct: 17 VGQLPEPTTPEVAFAGRSNVGKSSLLNRLVGRKALARVSSQPGKTANINFF--------- 67 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 ++ + VD+PGYG+A+ ++ W LI Y ++ + V L+D RH +Q+D+D Sbjct: 68 -DVDGVRFVDLPGYGFAKVSQRERRRWADLIGGYFAQGRSFNLVVSLVDIRHDAQQLDRD 126 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + FL + + Y + LTK DKLS A+++ ++ L R + +I TSS GI Sbjct: 127 MLGFLTENELPYVVALTKADKLS--RARQS-QQAAALARQFGIDRTRMIVTSSETGLGIG 183 Query: 201 VLRKAILET 209 LR+ I E Sbjct: 184 ELRRVIEEA 192 >gi|223939366|ref|ZP_03631245.1| GTP-binding protein HSR1-related [bacterium Ellin514] gi|223891970|gb|EEF58452.1| GTP-binding protein HSR1-related [bacterium Ellin514] Length = 196 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 109/199 (54%), Gaps = 9/199 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F P + P+ PE AF GRSNVGKSSL+N+L RK+LAR S PG T+ +NFF Sbjct: 7 VFEVSAPNLETCPEETLPEFAFIGRSNVGKSSLVNLLAGRKDLARVSKVPGYTKLINFFT 66 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 A LVD+PGYGYA ++N + + YL++RS L CV++LID RH Sbjct: 67 INK---------AWRLVDLPGYGYAHIARENSARFNDAVSNYLAKRSNLYCVFVLIDSRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++ID + +L +++ ++ TK DK+ Q ++ K I + PE++ S Sbjct: 118 KPQKIDLEFVQWLGEQSAPCALIFTKTDKVKAAQLQTNMDLFKESISGWFENVPEILSCS 177 Query: 193 SVKRKGIEVLRKAILETIN 211 SV + G+ + I E ++ Sbjct: 178 SVTKNGVREILNVIDEALS 196 >gi|126700919|ref|YP_001089816.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile 630] gi|260684844|ref|YP_003216129.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile CD196] gi|260688502|ref|YP_003219636.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile R20291] gi|115252356|emb|CAJ70197.1| GTP-binding protein EngB; putative endoglucanase [Clostridium difficile] gi|260211007|emb|CBA66315.1| probable GTP-binding protein [Clostridium difficile CD196] gi|260214519|emb|CBE07030.1| probable GTP-binding protein [Clostridium difficile R20291] Length = 194 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA +GRSNVGKSS+IN L+NR+N ARTS PG+T+ +NF+ L NN Sbjct: 10 PAEGIPEIALAGRSNVGKSSIINTLLNRRNFARTSQTPGKTRTINFY-------LINN-- 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K + WGG++ RYL R L ++LL+D RH D+ ++ + Sbjct: 61 EFYFVDLPGYGYAKIAKSEKEKWGGIMERYLESRQELCSIFLLVDIRHEPTADDKLMYEW 120 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + ++ TK DK+S Q+ + + ++ + +VIP SS+K+ G+E L + Sbjct: 121 IKHFGYNCVVIATKADKISRGQYQKHISIIRKKLQ--MESSEKVIPVSSLKKTGVEELWE 178 Query: 205 AILETIN 211 I+ N Sbjct: 179 EIVNQYN 185 >gi|254976899|ref|ZP_05273371.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-66c26] gi|255094286|ref|ZP_05323764.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile CIP 107932] gi|255102467|ref|ZP_05331444.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-63q42] gi|255308372|ref|ZP_05352543.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile ATCC 43255] gi|255316039|ref|ZP_05357622.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-76w55] gi|255518696|ref|ZP_05386372.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-97b34] gi|255651818|ref|ZP_05398720.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-37x79] gi|255657258|ref|ZP_05402667.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-23m63] gi|306521606|ref|ZP_07407953.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-32g58] gi|119369184|sp|Q180E5|ENGB_CLOD6 RecName: Full=Probable GTP-binding protein EngB Length = 203 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA +GRSNVGKSS+IN L+NR+N ARTS PG+T+ +NF+ L NN Sbjct: 19 PAEGIPEIALAGRSNVGKSSIINTLLNRRNFARTSQTPGKTRTINFY-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K + WGG++ RYL R L ++LL+D RH D+ ++ + Sbjct: 70 EFYFVDLPGYGYAKIAKSEKEKWGGIMERYLESRQELCSIFLLVDIRHEPTADDKLMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + ++ TK DK+S Q+ + + ++ + +VIP SS+K+ G+E L + Sbjct: 130 IKHFGYNCVVIATKADKISRGQYQKHISIIRKKLQ--MESSEKVIPVSSLKKTGVEELWE 187 Query: 205 AILETIN 211 I+ N Sbjct: 188 EIVNQYN 194 >gi|296451903|ref|ZP_06893619.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile NAP08] gi|296879704|ref|ZP_06903679.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile NAP07] gi|296259217|gb|EFH06096.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile NAP08] gi|296429293|gb|EFH15165.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile NAP07] Length = 206 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA +GRSNVGKSS+IN L+NR+N ARTS PG+T+ +NF+ L NN Sbjct: 22 PAEGIPEIALAGRSNVGKSSIINTLLNRRNFARTSQTPGKTRTINFY-------LINN-- 72 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K + WGG++ RYL R L ++LL+D RH D+ ++ + Sbjct: 73 EFYFVDLPGYGYAKIAKSEKEKWGGIMERYLESRQELCSIFLLVDIRHEPTADDKLMYEW 132 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + ++ TK DK+S Q+ + + ++ + +VIP SS+K+ G+E L + Sbjct: 133 IKHFGYNCVVIATKADKISRGQYQKHISIIRKKLQ--MESSEKVIPVSSLKKTGVEELWE 190 Query: 205 AILETIN 211 I+ N Sbjct: 191 EIVNQYN 197 >gi|92115232|ref|YP_575160.1| cell division checkpoint GTPase YihA [Chromohalobacter salexigens DSM 3043] gi|119369183|sp|Q1QSU7|ENGB_CHRSD RecName: Full=Probable GTP-binding protein EngB gi|91798322|gb|ABE60461.1| cell division checkpoint GTPase YihA [Chromohalobacter salexigens DSM 3043] Length = 207 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 76/190 (40%), Positives = 108/190 (56%), Gaps = 8/190 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + P E+AF+GRSN GKSS IN L +K LARTS PGRTQ +NFF Sbjct: 14 FLTSAPGLAQCPPDQGAEVAFAGRSNAGKSSAINTLTQQKALARTSKTPGRTQLINFFT- 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L N+ LVD+PGYG+A+ P + W + YL ER+TLR + L++D RH Sbjct: 73 -----LAND-ETYRLVDLPGYGFAKVPDQVKLEWQRHLSEYLYERATLRGLMLVMDVRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + DQ + + D+KA+ I+LTK DKL P A+ L + + ++ V S+ Sbjct: 127 LSEFDQMMLGWADEKAMPVHILLTKADKLKPGAAKSALLAVRRQLADWEDL-VSVQLFSA 185 Query: 194 VKRKGIEVLR 203 +KR+G++ R Sbjct: 186 LKRQGVDEAR 195 >gi|317499960|ref|ZP_07958196.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae bacterium 8_1_57FAA] gi|316898677|gb|EFV20712.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae bacterium 8_1_57FAA] Length = 202 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 75/183 (40%), Positives = 110/183 (60%), Gaps = 11/183 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ D Sbjct: 18 LPENDKPEVAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 M LVD+PGYGYAR +K + WG +I RYL L+ V+LLID RH D+ ++ Sbjct: 70 -EMYLVDLPGYGYARVSEKEKEQWGRMIERYLHSSKQLKAVFLLIDIRHDPSANDRMMYQ 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ ++ I+ TK+DK+ + Q+ ++ K + P +VIP SSV ++G E + Sbjct: 129 WIVEQGYHPIIIATKLDKIKRSQIQKHVKMLKQGLDLVPGT--KVIPFSSVSKQGKEDIW 186 Query: 204 KAI 206 + I Sbjct: 187 ELI 189 >gi|255037700|ref|YP_003088321.1| GTP-binding protein HSR1-related [Dyadobacter fermentans DSM 18053] gi|254950456|gb|ACT95156.1| GTP-binding protein HSR1-related [Dyadobacter fermentans DSM 18053] Length = 202 Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 75/187 (40%), Positives = 104/187 (55%), Gaps = 10/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE AF GRSNVGKSSLIN+L ++K LA+TS PG+TQ +N F+ D Sbjct: 19 PEPVLPEYAFIGRSNVGKSSLINMLTSKKALAKTSQQPGKTQMINHFIIDD--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A LVD+PGYGYA+ K + W +I YL R L C ++L+D RH +D + + Sbjct: 70 AWYLVDLPGYGYAKVSKVEREKWEKMIHDYLHYRENLICTFVLVDVRHSAMAVDLNFMAA 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + ++I+ TK DKL P +E K + PE+ TS+ K +G E + Sbjct: 130 LGEAGIPFEIIFTKADKLKPAQVASQVEAYKRKMAELWEEVPEMYVTSAEKNEGREPILT 189 Query: 205 AILETIN 211 AI ET N Sbjct: 190 AI-ETYN 195 >gi|58697268|ref|ZP_00372648.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila simulans] gi|225630063|ref|YP_002726854.1| GTP-binding protein [Wolbachia sp. wRi] gi|254783220|sp|C0R5M1|ENGB_WOLWR RecName: Full=Probable GTP-binding protein EngB gi|58536385|gb|EAL59835.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila simulans] gi|225592044|gb|ACN95063.1| GTP-binding protein [Wolbachia sp. wRi] Length = 197 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 71/167 (42%), Positives = 102/167 (61%), Gaps = 8/167 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G +I LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +NF+ Sbjct: 11 FIFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSM 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGY+ A K+ + + LI YL +R LR V++LID + G Sbjct: 71 YN--------DKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRRNLRRVFVLIDSKVG 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 +K+ID+D +L +++ +VLTKIDK+S + +E + I N Sbjct: 123 LKEIDKDFIYWLICNNINFNVVLTKIDKVSQKSLGAVIEDIQRWINN 169 >gi|301099279|ref|XP_002898731.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262104804|gb|EEY62856.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 272 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 92/159 (57%), Gaps = 5/159 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKSSLIN L +K L RTS PGRTQ L+F K +L Sbjct: 105 LPDWDVPEIAFAGRSNAGKSSLINALTRQKGLVRTSKTPGRTQQLHFL---SVGGKKGSL 161 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER--STLRCVYLLIDCRHGVKQIDQDV 141 P ++LVDMPG+G+A APKK VD W L+ Y+ R + L+ LLID R G+ D D Sbjct: 162 PELSLVDMPGFGFATAPKKVVDEWHTLVGGYIDNRRGNNLKTTMLLIDARRGLGPADHDF 221 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 FL YQ+V TK D +S ++ + K + + N Sbjct: 222 MDFLHDLGALYQVVFTKADAVSRGDLEKQIHKAQDVALN 260 >gi|227540053|ref|ZP_03970102.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240069|gb|EEI90084.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300] Length = 207 Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 103/188 (54%), Gaps = 13/188 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE AF GRSNVGKSSLIN + N+K LA+TS PG+TQ +N F+ D Sbjct: 18 LPDPTLPEYAFIGRSNVGKSSLINAMTNKKGLAKTSQKPGKTQLINHFIIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYG+A+ K N W I RYL+ R L+CV++LID RH ++ID D Sbjct: 70 -EWFLVDLPGYGFAQTSKTNRSEWQKFIRRYLTHRDNLQCVFVLIDSRHEPQKIDLDFCC 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + + + +V TK DK S + + K + + + P TS+ + G E Sbjct: 129 WLGECGLPFMLVFTKADKQSAVKSDVNIAKFRKSLLQWFEEVPPHFLTSAEAKTGCE--- 185 Query: 204 KAILETIN 211 ILE IN Sbjct: 186 -PILEMIN 192 >gi|225631246|ref|ZP_03787933.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591057|gb|EEH12252.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 197 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 73/167 (43%), Positives = 104/167 (62%), Gaps = 8/167 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G +I LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +NF+ Sbjct: 11 FIFGASDIKTLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFY-- 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ N+ LVD+PGYGY+ A K+ + + LI YL +R LR V++LID + G Sbjct: 69 ----SMYND--KFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRRNLRRVFVLIDSKVG 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 +K+ID+D +L ++ IVLTKIDK+S + +E + I N Sbjct: 123 LKEIDKDFIYWLIYNNINLNIVLTKIDKVSQKSLGAVIEDIQKWINN 169 >gi|300771784|ref|ZP_07081655.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobacterium spiritivorum ATCC 33861] gi|300761170|gb|EFK57995.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobacterium spiritivorum ATCC 33861] Length = 207 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 13/188 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE AF GRSNVGKSSLIN + N+K LA+TS PG+TQ +N F+ D Sbjct: 18 LPDPTLPEYAFIGRSNVGKSSLINAMTNKKGLAKTSQKPGKTQLINHFIIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYG+A+ K N W I RYL+ R L+CV++LID RH ++ID D Sbjct: 70 -EWFLVDLPGYGFAQTSKTNRSEWQKFIRRYLTHRDNLQCVFVLIDSRHEPQKIDLDFCC 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + + + ++ TK DK S + + K + + + P TS+ + G E Sbjct: 129 WLGECGLPFMLIFTKADKQSAVKSDVNIAKFRKSLLQWFEEVPPHFLTSAETKTGCE--- 185 Query: 204 KAILETIN 211 ILE IN Sbjct: 186 -PILEMIN 192 >gi|153814162|ref|ZP_01966830.1| hypothetical protein RUMTOR_00371 [Ruminococcus torques ATCC 27756] gi|331087817|ref|ZP_08336742.1| GTP-binding protein engB [Lachnospiraceae bacterium 3_1_46FAA] gi|145848558|gb|EDK25476.1| hypothetical protein RUMTOR_00371 [Ruminococcus torques ATCC 27756] gi|330409512|gb|EGG88953.1| GTP-binding protein engB [Lachnospiraceae bacterium 3_1_46FAA] Length = 202 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 11/183 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ D Sbjct: 18 LPENDKPEVAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 M LVD+PGYGYAR +K + WG +I RYL L+ V+LLID RH D+ ++ Sbjct: 70 -EMYLVDLPGYGYARVSEKEKEQWGRMIERYLHSSKQLKAVFLLIDIRHDPSANDRMMYQ 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ ++ I+ TK+DK+ + Q+ ++ K + P +V+P SSV ++G E + Sbjct: 129 WIVEQGYHPIIIATKLDKIKRSQIQKHVKMLKQGLDLVPGT--KVLPFSSVSKQGKEDIW 186 Query: 204 KAI 206 + I Sbjct: 187 ELI 189 >gi|315224700|ref|ZP_07866523.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga ochracea F0287] gi|314945328|gb|EFS97354.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga ochracea F0287] Length = 201 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ PK PE AF GRSNVGKSSLIN+L N KNLA+TS PG+TQ +N F Sbjct: 7 FVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLINHFKI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYAR K+ + I +Y ER L C ++L+D RH Sbjct: 67 DN---------SWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHE 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L + ++ + IV TK DKL P + + + ++ P TS+ Sbjct: 118 PQKIDVEFMQWLGEHSIPFAIVFTKADKLKPLAIERNIAAYQQVLLETWEEFPPYFVTSA 177 Query: 194 VKRKGIEVLRKAILETIN 211 + G E L I E IN Sbjct: 178 ENKTGKEELTHYI-EQIN 194 >gi|94270231|ref|ZP_01291683.1| GTP-binding [delta proteobacterium MLMS-1] gi|93450888|gb|EAT01901.1| GTP-binding [delta proteobacterium MLMS-1] Length = 199 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/155 (43%), Positives = 98/155 (63%), Gaps = 9/155 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ V ++ LP PEIAF+GRSNVGKSSLIN L+ RKNL + S PG+T+ LNF++ Sbjct: 12 FVDSVFDLAKLPAGELPEIAFAGRSNVGKSSLINCLLGRKNLVKVSAKPGKTRSLNFYLV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ K+ + W L+ YL +R LRCV ++ID RH Sbjct: 72 DE---------RLHLVDLPGYGYAKVDKRMQEQWRQLVGGYLEKRDNLRCVVVIIDLRHE 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 +K++D+ + +L V++ +V TK+DKLS Q Sbjct: 123 LKELDRLLAQWLRDIGVAFLLVYTKMDKLSRNQQQ 157 >gi|66818499|ref|XP_642909.1| hypothetical protein DDB_G0276985 [Dictyostelium discoideum AX4] gi|60471024|gb|EAL68994.1| hypothetical protein DDB_G0276985 [Dictyostelium discoideum AX4] Length = 743 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 109/201 (54%), Gaps = 11/201 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F S F+ I PE+AF GRSNVGKSSLIN L R LA+TS+ PG+TQ Sbjct: 253 FFDSKMKFIGAAKNIDSFLPETLPEVAFIGRSNVGKSSLINALTQR-GLAKTSDKPGQTQ 311 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F + LVD+PGYG+A A + V+ W + + YL+ER + CV++ Sbjct: 312 SINWFELG---------STLYLVDLPGYGFAFAKETLVEQWSDITIHYLTERKCISCVFI 362 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAH 185 LID RHG+K D+++ LDKK + I+LTK D P + + T I+ NY + Sbjct: 363 LIDSRHGLKDSDRNLLLELDKKKIKTHIILTKADLTKPEDLVKRISITNQEIQTNYRYST 422 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 V+P SS GI L K I Sbjct: 423 TPVLPISSKNLSGISDLSKLI 443 >gi|313203549|ref|YP_004042206.1| ribosome biogenesis GTP-binding protein ysxc [Paludibacter propionicigenes WB4] gi|312442865|gb|ADQ79221.1| ribosome biogenesis GTP-binding protein YsxC [Paludibacter propionicigenes WB4] Length = 198 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/175 (42%), Positives = 102/175 (58%), Gaps = 11/175 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P + PE AF GRSNVGKSSLIN+L NRK+LA TS+ PG+T +N F + K++ Sbjct: 19 PDSKLPEYAFIGRSNVGKSSLINMLCNRKDLAMTSSRPGKTLLINHFLINKNWH------ 72 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA A KK D +I Y+ R L C++LLIDCRH ++ID + Sbjct: 73 ----LVDLPGYGYATAGKKMRDQLQDIIESYILNREQLTCLFLLIDCRHEPQKIDLEFME 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +L + V + IV TK+DKL+ + ++ K + P + TSS KR G Sbjct: 129 WLGENGVPFSIVFTKLDKLTHAKGKSNVQAYKDKLSEQWEELPPIFLTSSEKRTG 183 >gi|213963255|ref|ZP_03391512.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sputigena Capno] gi|213954117|gb|EEB65442.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sputigena Capno] Length = 201 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ PK PE AF GRSNVGKSSLIN+L N KNLA+TS PG+TQ +N F Sbjct: 7 FVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLINHFKI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYAR K+ + I +Y ER L C ++L+D RH Sbjct: 67 DN---------SWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHE 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L + + + IV TK DKL P + + + ++ P TS+ Sbjct: 118 PQKIDVEFMQWLGEHGIPFAIVFTKADKLKPLVIERNIAAYQQVLLETWEEFPPYFVTSA 177 Query: 194 VKRKGIEVLRKAILETIN 211 + G E L I E IN Sbjct: 178 ENKTGKEELTHYI-EQIN 194 >gi|169832607|ref|YP_001694973.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae Hungary19A-6] gi|238688373|sp|B1ICY8|ENGB_STRPI RecName: Full=Probable GTP-binding protein EngB gi|168995109|gb|ACA35721.1| GTP-binding protein [Streptococcus pneumoniae Hungary19A-6] Length = 195 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 102/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV ++G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKEGMDEAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|307244018|ref|ZP_07526137.1| ribosome biogenesis GTP-binding protein YsxC [Peptostreptococcus stomatis DSM 17678] gi|306492542|gb|EFM64576.1| ribosome biogenesis GTP-binding protein YsxC [Peptostreptococcus stomatis DSM 17678] Length = 240 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 115/202 (56%), Gaps = 16/202 (7%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +SA I + V + P G PEIA +GRSNVGKSSLIN L+NR+ ARTS+ PG+T+ + Sbjct: 38 RSAEITMSAVSK-SQYPAEGIPEIALAGRSNVGKSSLINGLLNRRTFARTSSTPGKTRTI 96 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 NF+ L NN VD+PGYGYA+ K D WGG++ RYL +R L ++LL+ Sbjct: 97 NFY-------LINN--EFYFVDLPGYGYAKVSKTEKDKWGGIMERYLEDREELCAIFLLV 147 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE- 187 D RH DQ ++ ++ +V TK DK++ Q K + +IR + Sbjct: 148 DVRHEPTADDQMMYDWIKHFGYDCVVVATKADKITRGQYQ----KHEAIIRRTLNMDKDD 203 Query: 188 -VIPTSSVKRKGIEVLRKAILE 208 V+ TSS K+ G+E L + I++ Sbjct: 204 KVVITSSSKKNGLEDLWETIVD 225 >gi|270292404|ref|ZP_06198615.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. M143] gi|270278383|gb|EFA24229.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. M143] Length = 197 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 23 PQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 74 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 133 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 134 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDQAWD 191 Query: 205 AILETI 210 AILE + Sbjct: 192 AILEKL 197 >gi|306824843|ref|ZP_07458187.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433054|gb|EFM36026.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 195 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDQAWN 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|225855010|ref|YP_002736522.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae JJA] gi|254783214|sp|C1CFF1|ENGB_STRZJ RecName: Full=Probable GTP-binding protein EngB gi|225724050|gb|ACO19903.1| GTP-binding protein [Streptococcus pneumoniae JJA] Length = 195 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHAPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDEAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|149371567|ref|ZP_01890983.1| GTP-binding protein [unidentified eubacterium SCB49] gi|149355194|gb|EDM43754.1| GTP-binding protein [unidentified eubacterium SCB49] Length = 199 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/196 (38%), Positives = 108/196 (55%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFV 72 F+ E+ PK PE AF GRSNVGKSSLIN+LV++KN+A+TS PG+TQ +N F + Sbjct: 8 FIMSNSEVAKCPKDRLPEYAFIGRSNVGKSSLINMLVDQKNMAKTSGRPGKTQLINHFLI 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K++ LVD+PGYGYAR KK ++ I Y +R L ++L+DCRH Sbjct: 68 NKNW----------FLVDLPGYGYARVSKKAKKTFQRFITDYFEKREQLILAFVLVDCRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + IDQ+ +L + + + I+ TK DKL P + L+ + + P TS Sbjct: 118 EPQPIDQEFMQYLGENGIPFHIIFTKADKLKPGALERNLKAYETKMLETWEEMPRSFVTS 177 Query: 193 SVKRKGIEVLRKAILE 208 + K +G + L I E Sbjct: 178 ASKYEGRDELLNYIGE 193 >gi|315613539|ref|ZP_07888446.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis ATCC 49296] gi|315314230|gb|EFU62275.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis ATCC 49296] Length = 195 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDQAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|312866664|ref|ZP_07726878.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis F0405] gi|311097745|gb|EFQ55975.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis F0405] Length = 200 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/190 (43%), Positives = 104/190 (54%), Gaps = 15/190 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH D ++ F Sbjct: 72 KLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K K T I SSV R+G+E Sbjct: 132 LKYYEIPVILVATKADKIPRGKWNKHESIIKKKLDFDPADT----FIVFSSVTREGLEKS 187 Query: 203 RKAILETINY 212 +AILE Y Sbjct: 188 WEAILENAFY 197 >gi|306829877|ref|ZP_07463064.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis ATCC 6249] gi|304427888|gb|EFM30981.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis ATCC 6249] Length = 195 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDQAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|289168391|ref|YP_003446660.1| hypothetical protein smi_1558 [Streptococcus mitis B6] gi|288907958|emb|CBJ22798.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 197 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 23 PQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 74 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDVQMYEF 133 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 134 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDEAWD 191 Query: 205 AILETI 210 AILE + Sbjct: 192 AILEKL 197 >gi|302386736|ref|YP_003822558.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium saccharolyticum WM1] gi|302197364|gb|ADL04935.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium saccharolyticum WM1] Length = 199 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/190 (38%), Positives = 114/190 (60%), Gaps = 15/190 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PE AF+G+SNVGKSSLIN L+NRK+ ARTS+ PG+TQ +NF+ D Sbjct: 18 LPENTKPEFAFAGKSNVGKSSLINALMNRKSFARTSSQPGKTQTINFYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A+ VD+PGYGYA+ ++ WG +I YL + LRCV+LLID RH + D+ ++ Sbjct: 70 -ALYYVDLPGYGYAKVSQEVKAKWGKMIENYLHKSPMLRCVFLLIDIRHEPSENDKTMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEV 201 ++ I+ TK+DK+ + Q++++ ++R + VIP S+ ++G E Sbjct: 129 WIVYNGYQPVIIATKLDKIKRSQVQKSVK----ILRQGLGLGSDVMVIPFSAETKQGREE 184 Query: 202 LRKAILETIN 211 + + I ET+N Sbjct: 185 IWEMISETVN 194 >gi|256819259|ref|YP_003140538.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga ochracea DSM 7271] gi|256580842|gb|ACU91977.1| GTP-binding protein HSR1-related [Capnocytophaga ochracea DSM 7271] Length = 200 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ PK PE AF GRSNVGKSSLIN+L N KNLA+TS PG+TQ +N F Sbjct: 7 FVMSNSQVSKCPKDNLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLINHFKI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYAR K+ + I +Y ER L C ++L+D RH Sbjct: 67 DN---------SWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVDVRHE 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L + + + IV TK DKL P + + + ++ P TS+ Sbjct: 118 PQKIDVEFMQWLGEHGIPFAIVFTKADKLKPLAIERNIAAYQQVLLETWEEFPPYFITSA 177 Query: 194 VKRKGIEVLRKAILETIN 211 + G E L I E IN Sbjct: 178 ENKTGKEELTHYI-EQIN 194 >gi|182684523|ref|YP_001836270.1| GTP-binding protein [Streptococcus pneumoniae CGSP14] gi|322377850|ref|ZP_08052339.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. M334] gi|226741185|sp|B2IR86|ENGB_STRPS RecName: Full=Probable GTP-binding protein EngB gi|182629857|gb|ACB90805.1| GTP-binding protein [Streptococcus pneumoniae CGSP14] gi|321281273|gb|EFX58284.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. M334] Length = 197 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 23 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 74 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 133 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 134 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDEAWD 191 Query: 205 AILETI 210 AILE + Sbjct: 192 AILEKL 197 >gi|307706171|ref|ZP_07642989.1| conserved hypothetical protein [Streptococcus mitis SK321] gi|307618431|gb|EFN97580.1| conserved hypothetical protein [Streptococcus mitis SK321] Length = 195 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVNKAGMDEAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|221232329|ref|YP_002511482.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225861401|ref|YP_002742910.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae Taiwan19F-14] gi|307704382|ref|ZP_07641297.1| conserved hypothetical protein [Streptococcus mitis SK597] gi|307708345|ref|ZP_07644812.1| GTP-binding protein [Streptococcus mitis NCTC 12261] gi|254783212|sp|B8ZLT0|ENGB_STRPJ RecName: Full=Probable GTP-binding protein EngB gi|254783216|sp|C1CSI8|ENGB_STRZT RecName: Full=Probable GTP-binding protein EngB gi|220674790|emb|CAR69363.1| putative GTP-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225726988|gb|ACO22839.1| GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|307615791|gb|EFN94997.1| GTP-binding protein [Streptococcus mitis NCTC 12261] gi|307622067|gb|EFO01089.1| conserved hypothetical protein [Streptococcus mitis SK597] Length = 195 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDEAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|293365854|ref|ZP_06612559.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis ATCC 35037] gi|307703277|ref|ZP_07640222.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291315678|gb|EFE56126.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis ATCC 35037] gi|307623143|gb|EFO02135.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 195 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDQAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|323339571|ref|ZP_08079845.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus ruminis ATCC 25644] gi|323092966|gb|EFZ35564.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus ruminis ATCC 25644] Length = 202 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/178 (43%), Positives = 106/178 (59%), Gaps = 15/178 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA SGRSNVGKSSLIN L+NRK LARTS+ PG+TQ LNF+ N+++ L Sbjct: 23 PNEGFPEIALSGRSNVGKSSLINTLINRKGLARTSSQPGKTQTLNFY------NIESEL- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ KK+ + WG +I RY S+R LR V L+D RH ++D + F Sbjct: 76 --YFVDVPGYGYAKVSKKDREKWGQMIERYFSDRPVLRGVISLVDGRHEPTELDCQMIDF 133 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIE 200 L + + TK+DK+ + +T+ IR +P E++ SSV + G E Sbjct: 134 LHYYDLPILVCATKMDKI----PRGKWNRTESQIRKKLALNPQDEIVLFSSVTKAGKE 187 >gi|315924141|ref|ZP_07920367.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoramibacter alactolyticus ATCC 23263] gi|315622543|gb|EFV02498.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoramibacter alactolyticus ATCC 23263] Length = 212 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/182 (40%), Positives = 105/182 (57%), Gaps = 12/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+ GRSNVGKSS +N L+ R+NLARTS+ PG+TQ +NF+ D Sbjct: 19 PQDHLPELVLLGRSNVGKSSFVNTLIRRRNLARTSSQPGKTQTMNFYQINDL-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VDMPGYGYAR KK+ + WG +I YL +R L V+LL+D RH + D+ +F++ Sbjct: 71 -FRFVDMPGYGYARVSKKSREKWGAMIETYLQKRENLAGVFLLVDSRHEPSEDDELMFNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V+TK DKL+ ++ L + PT +VIP SSV++ G + + Sbjct: 130 LTYYGLVPMVVMTKFDKLNAMRKRKALNNIAATF-HLPTK--DVIPFSSVEKDGYDTAWE 186 Query: 205 AI 206 I Sbjct: 187 RI 188 >gi|15903469|ref|NP_359019.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae R6] gi|15459080|gb|AAL00230.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 197 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 23 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 74 KMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 133 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 134 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDEAWD 191 Query: 205 AILETI 210 AILE + Sbjct: 192 AILEKL 197 >gi|15901411|ref|NP_346015.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae TIGR4] gi|111658474|ref|ZP_01409147.1| hypothetical protein SpneT_02000374 [Streptococcus pneumoniae TIGR4] gi|116515393|ref|YP_816858.1| GTPase EngB [Streptococcus pneumoniae D39] gi|148984920|ref|ZP_01818173.1| GTPase EngB [Streptococcus pneumoniae SP3-BS71] gi|148988622|ref|ZP_01820055.1| GTPase EngB [Streptococcus pneumoniae SP6-BS73] gi|148990171|ref|ZP_01821402.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73] gi|148993406|ref|ZP_01822923.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68] gi|148997364|ref|ZP_01824969.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70] gi|149003199|ref|ZP_01828095.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69] gi|149007516|ref|ZP_01831151.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|149007879|ref|ZP_01831466.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|149012699|ref|ZP_01833675.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75] gi|149022038|ref|ZP_01836000.1| GTPase EngB [Streptococcus pneumoniae SP23-BS72] gi|168483553|ref|ZP_02708505.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00] gi|168486831|ref|ZP_02711339.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00] gi|168488709|ref|ZP_02712908.1| GTP-binding protein [Streptococcus pneumoniae SP195] gi|168491538|ref|ZP_02715681.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04] gi|168493473|ref|ZP_02717616.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06] gi|168575234|ref|ZP_02721197.1| GTP-binding protein [Streptococcus pneumoniae MLV-016] gi|194397246|ref|YP_002038200.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae G54] gi|225859325|ref|YP_002740835.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae 70585] gi|237650251|ref|ZP_04524503.1| GTPase EngB [Streptococcus pneumoniae CCRI 1974] gi|237820866|ref|ZP_04596711.1| GTPase EngB [Streptococcus pneumoniae CCRI 1974M2] gi|298230527|ref|ZP_06964208.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255217|ref|ZP_06978803.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503306|ref|YP_003725246.1| GTPase [Streptococcus pneumoniae TCH8431/19A] gi|303255353|ref|ZP_07341423.1| GTPase EngB [Streptococcus pneumoniae BS455] gi|303260195|ref|ZP_07346167.1| GTPase EngB [Streptococcus pneumoniae SP-BS293] gi|303262586|ref|ZP_07348527.1| GTPase EngB [Streptococcus pneumoniae SP14-BS292] gi|303264988|ref|ZP_07350903.1| GTPase EngB [Streptococcus pneumoniae BS397] gi|303266451|ref|ZP_07352339.1| GTPase EngB [Streptococcus pneumoniae BS457] gi|303269033|ref|ZP_07354815.1| GTPase EngB [Streptococcus pneumoniae BS458] gi|307068211|ref|YP_003877177.1| putative GTPase [Streptococcus pneumoniae AP200] gi|307127778|ref|YP_003879809.1| GTP-binding protein [Streptococcus pneumoniae 670-6B] gi|54037058|sp|P64073|ENGB_STRR6 RecName: Full=Probable GTP-binding protein EngB gi|54040981|sp|P64072|ENGB_STRPN RecName: Full=Probable GTP-binding protein EngB gi|122278296|sp|Q04JI0|ENGB_STRP2 RecName: Full=Probable GTP-binding protein EngB gi|238690842|sp|B5E6L1|ENGB_STRP4 RecName: Full=Probable GTP-binding protein EngB gi|254783211|sp|C1C8F9|ENGB_STRP7 RecName: Full=Probable GTP-binding protein EngB gi|14973059|gb|AAK75655.1| GTP-binding protein [Streptococcus pneumoniae TIGR4] gi|116075969|gb|ABJ53689.1| GTP-binding protein [Streptococcus pneumoniae D39] gi|147756419|gb|EDK63460.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70] gi|147758659|gb|EDK65656.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69] gi|147760606|gb|EDK67580.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|147760875|gb|EDK67845.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|147763299|gb|EDK70237.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75] gi|147922942|gb|EDK74058.1| GTPase EngB [Streptococcus pneumoniae SP3-BS71] gi|147924438|gb|EDK75527.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73] gi|147925823|gb|EDK76898.1| GTPase EngB [Streptococcus pneumoniae SP6-BS73] gi|147927961|gb|EDK78981.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68] gi|147929882|gb|EDK80871.1| GTPase EngB [Streptococcus pneumoniae SP23-BS72] gi|172043175|gb|EDT51221.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00] gi|183570230|gb|EDT90758.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00] gi|183572689|gb|EDT93217.1| GTP-binding protein [Streptococcus pneumoniae SP195] gi|183574254|gb|EDT94782.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04] gi|183576321|gb|EDT96849.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06] gi|183578703|gb|EDT99231.1| GTP-binding protein [Streptococcus pneumoniae MLV-016] gi|194356913|gb|ACF55361.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae G54] gi|225720438|gb|ACO16292.1| GTP-binding protein [Streptococcus pneumoniae 70585] gi|298238901|gb|ADI70032.1| GTPase [Streptococcus pneumoniae TCH8431/19A] gi|301794577|emb|CBW37021.1| putative GTP-binding protein [Streptococcus pneumoniae INV104] gi|301800399|emb|CBW33030.1| putative GTP-binding protein [Streptococcus pneumoniae OXC141] gi|301802286|emb|CBW35038.1| putative GTP-binding protein [Streptococcus pneumoniae INV200] gi|302597721|gb|EFL64797.1| GTPase EngB [Streptococcus pneumoniae BS455] gi|302636303|gb|EFL66797.1| GTPase EngB [Streptococcus pneumoniae SP14-BS292] gi|302638692|gb|EFL69155.1| GTPase EngB [Streptococcus pneumoniae SP-BS293] gi|302641423|gb|EFL71788.1| GTPase EngB [Streptococcus pneumoniae BS458] gi|302644029|gb|EFL74288.1| GTPase EngB [Streptococcus pneumoniae BS457] gi|302645507|gb|EFL75739.1| GTPase EngB [Streptococcus pneumoniae BS397] gi|306409748|gb|ADM85175.1| Predicted GTPase [Streptococcus pneumoniae AP200] gi|306484840|gb|ADM91709.1| GTP-binding protein [Streptococcus pneumoniae 670-6B] gi|327389756|gb|EGE88101.1| hypothetical protein SPAR5_1446 [Streptococcus pneumoniae GA04375] gi|332072415|gb|EGI82898.1| hypothetical protein SPAR50_1585 [Streptococcus pneumoniae GA17570] gi|332072738|gb|EGI83219.1| hypothetical protein SPAR148_1498 [Streptococcus pneumoniae GA17545] gi|332073905|gb|EGI84383.1| hypothetical protein SPAR68_1577 [Streptococcus pneumoniae GA41301] gi|332199612|gb|EGJ13687.1| hypothetical protein SPAR69_1522 [Streptococcus pneumoniae GA41317] gi|332200132|gb|EGJ14205.1| hypothetical protein SPAR93_1607 [Streptococcus pneumoniae GA47368] gi|332201009|gb|EGJ15080.1| hypothetical protein SPAR120_1514 [Streptococcus pneumoniae GA47901] Length = 195 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDEAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|225857194|ref|YP_002738705.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae P1031] gi|254783215|sp|C1CLR7|ENGB_STRZP RecName: Full=Probable GTP-binding protein EngB gi|225725684|gb|ACO21536.1| GTP-binding protein [Streptococcus pneumoniae P1031] Length = 195 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDEAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|210615411|ref|ZP_03290538.1| hypothetical protein CLONEX_02754 [Clostridium nexile DSM 1787] gi|210150260|gb|EEA81269.1| hypothetical protein CLONEX_02754 [Clostridium nexile DSM 1787] Length = 205 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 74/177 (41%), Positives = 105/177 (59%), Gaps = 11/177 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ EIAF+G+SNVGKSSLIN L+NRK+ ARTS PG+TQ +NF+ D Sbjct: 23 LPETDKVEIAFAGKSNVGKSSLINALMNRKSFARTSATPGKTQTINFYNINDI------- 75 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 M LVD+PGYGYA+ +K WG LI RYL L+ V+LLID RH D+ ++ Sbjct: 76 --MYLVDLPGYGYAKVSEKEKIQWGKLIERYLHSSKQLKAVFLLIDIRHDPSANDKMMYE 133 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ + + I+ TK+DKL + + ++ K + P ++IP SSV ++G E Sbjct: 134 WIVSQGYNPIIIATKLDKLKRSQVAKHVKMIKQGLDLVPGT--QIIPFSSVSKQGRE 188 >gi|197302447|ref|ZP_03167502.1| hypothetical protein RUMLAC_01175 [Ruminococcus lactaris ATCC 29176] gi|197298345|gb|EDY32890.1| hypothetical protein RUMLAC_01175 [Ruminococcus lactaris ATCC 29176] Length = 200 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 73/176 (41%), Positives = 105/176 (59%), Gaps = 11/176 (6%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 +LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ D Sbjct: 17 VLPENDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNIND------- 69 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 M LVD+PGYGYA+ ++ WG LI RYL LR V+LLID RH D+ ++ Sbjct: 70 --EMYLVDLPGYGYAKVSEQEKAQWGKLIERYLHTSGQLRAVFLLIDIRHAPSANDKMMY 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ ++ I+ TK+DK+ + Q+ ++ K + P +VIP SS ++G Sbjct: 128 HWIVEQGYQPIIIATKLDKIKRSQVQKCIKILKEGLELVPGT--KVIPFSSQTKQG 181 >gi|307705962|ref|ZP_07642787.1| conserved hypothetical protein [Streptococcus mitis SK564] gi|307620472|gb|EFN99583.1| conserved hypothetical protein [Streptococcus mitis SK564] Length = 195 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKAGMDEAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|268611238|ref|ZP_06144965.1| hypothetical protein RflaF_17292 [Ruminococcus flavefaciens FD-1] Length = 202 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 13/180 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIAF+G SNVGKS+LIN L NRKNLAR S+ PG+T +NF+ L + VD Sbjct: 27 EIAFAGHSNVGKSTLINKLFNRKNLARVSSVPGKTATINFY----------GLENLYFVD 76 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ K + W GLI YLS +R V++L+D RH + D + ++L + Sbjct: 77 LPGYGYAKVSKSEKERWAGLIEGYLSSDRDIRLVFMLVDMRHAPTKDDIHMINYLIDTEM 136 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + +VLTK DKL+ T + +E K I + H IP SS +G+E LR AI+E I Sbjct: 137 PFVLVLTKADKLNKTERAKRIEAFKDEIPCFEDIHS--IPFSSQTFEGVEELR-AIVEDI 193 >gi|325117628|emb|CBZ53180.1| Ribosome biogenesis GTP-binding protein YsxC,related [Neospora caninum Liverpool] Length = 1085 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 108/183 (59%), Gaps = 7/183 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSNVGKSSL+N L R+ + ++ PG TQHL+FF + Sbjct: 28 LPPPILPEVAFAGRSNVGKSSLLNELAGRRLTSLVTSRPGTTQHLHFFK-------AGSP 80 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + LVD+PGYG+A+A W + YL R LR V++LID RHG+K+ D+++ Sbjct: 81 PVLCLVDLPGYGFAKAAAATRLQWTEFSLYYLKTRKNLRRVFVLIDARHGLKESDKEMLH 140 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 FL + VS+Q+VLTK D + P +TL K + + + + S+++ + ++VLR Sbjct: 141 FLHRWGVSWQLVLTKADLVKPKDLVKTLMLVKEDAKAFRHQAADPVAVSALRHQALDVLR 200 Query: 204 KAI 206 + + Sbjct: 201 REM 203 >gi|117926943|ref|YP_867560.1| small GTP-binding protein [Magnetococcus sp. MC-1] gi|117610699|gb|ABK46154.1| small GTP-binding protein [Magnetococcus sp. MC-1] Length = 218 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 76/183 (41%), Positives = 104/183 (56%), Gaps = 10/183 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE+AF+GRSNVGKSSL+N L+NR+ LAR SN PGRT+ LNFF Sbjct: 25 PDDGLPEVAFAGRSNVGKSSLLNKLLNRRQLARVSNTPGRTRELNFFRINQ--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A VD+PGYGYA+ + + W I Y + R LR V LL+D R G+ + DQ + F Sbjct: 76 AYYYVDLPGYGYAKVGRGQREVWDRGIGLYFNSRRDLRAVILLLDIRRGMTEQDQAMLDF 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAHPEVIPTSSVKRKGIEVLR 203 + K + VLTK DKL+ +E ++ + ++ P A ++ TSS K GI LR Sbjct: 136 IFKMGLPVLPVLTKSDKLNANPRREAIKAMRLMVAEKVPLAVAPLLVTSSSKGDGILELR 195 Query: 204 KAI 206 + + Sbjct: 196 QTL 198 >gi|257063740|ref|YP_003143412.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Slackia heliotrinireducens DSM 20476] gi|256791393|gb|ACV22063.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Slackia heliotrinireducens DSM 20476] Length = 201 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 102/188 (54%), Gaps = 16/188 (8%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 I LPK+ PEI+F+GRSNVGKSSL+N L NRK LA+ S+ PG+T +NFF Sbjct: 15 INQLPKSVRPEISFAGRSNVGKSSLLNKLFNRKGLAKVSSTPGKTATINFFTA------- 67 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + VD+PGYGYA+ K W GLI Y + V LID RH ++D Sbjct: 68 ---SSADFVDLPGYGYAKVSKTERQRWSGLIEGYFHQDRRFALVVSLIDIRHAASELDVQ 124 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKG 198 + FL ++ + + +VLTK DKLS + + IR PE +I SS K G Sbjct: 125 MIDFLMEEGLPFVVVLTKADKLSKSQVNRQVAA----IRKQLGFEPEDPIIAVSSEKGTG 180 Query: 199 IEVLRKAI 206 I+VL++ I Sbjct: 181 IDVLKRTI 188 >gi|296876432|ref|ZP_06900484.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis ATCC 15912] gi|296432722|gb|EFH18517.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis ATCC 15912] Length = 200 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/190 (43%), Positives = 103/190 (54%), Gaps = 15/190 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH D ++ F Sbjct: 72 KLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRKNLKAVVSLVDFRHEPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K K T I SSV R+G+E Sbjct: 132 LKYYEIPVILVATKADKIPRGKWNKHESIIKKKLDFDPADT----FIVFSSVTREGLEKS 187 Query: 203 RKAILETINY 212 AILE Y Sbjct: 188 WDAILENTFY 197 >gi|331090539|ref|ZP_08339392.1| GTP-binding protein engB [Lachnospiraceae bacterium 2_1_46FAA] gi|330405882|gb|EGG85410.1| GTP-binding protein engB [Lachnospiraceae bacterium 2_1_46FAA] Length = 201 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/177 (43%), Positives = 106/177 (59%), Gaps = 11/177 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP EIAF+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +NF+ N Sbjct: 18 LPDTELMEIAFAGKSNVGKSSLINALLNRKSLARTSATPGKTQTINFY---------NVN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGYA+ K + WG LI RYL+ LR V+LLID RH D+ ++ Sbjct: 69 KELYLVDLPGYGYAKVSPKEKEQWGKLIERYLNTSKKLRAVFLLIDIRHEPTANDKMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ + I+ TK+DKL + Q+ ++ K + P +VIP SSV ++G E Sbjct: 129 WIVYHGYNPIIIATKLDKLKRSQIQKHVKMVKQGLNLVPGT--KVIPFSSVTKQGRE 183 >gi|268318043|ref|YP_003291762.1| small GTP-binding protein [Rhodothermus marinus DSM 4252] gi|262335577|gb|ACY49374.1| small GTP-binding protein [Rhodothermus marinus DSM 4252] Length = 198 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 10/198 (5%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K A F R V LP G PE+AF+GRSNVGKSSL+N L+ LARTS+ PG+T+ L Sbjct: 3 KPAARFFRSVTRWEDLPDDGLPEVAFAGRSNVGKSSLLNALLRAPGLARTSSTPGKTRQL 62 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 NF+ + + VD+PGYGYAR ++ WG LI RYL ER TL V LI Sbjct: 63 NFYRVNE---------QLYFVDLPGYGYARTSQEERRLWGRLITRYLQERPTLALVVHLI 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D RH +D+ + + + V Y I LTK DK+S + + + + ++ P + Sbjct: 114 DSRHPPTPLDEAMMDLMRGQHVPYLIALTKADKVSGNRRAQAVREVERALQARAMEVP-I 172 Query: 189 IPTSSVKRKGIEVLRKAI 206 IPTS+ G+ L + I Sbjct: 173 IPTSAHTGLGLRDLWRWI 190 >gi|86132597|ref|ZP_01051190.1| GTPase of unknown function [Dokdonia donghaensis MED134] gi|85816839|gb|EAQ38024.1| GTPase of unknown function [Dokdonia donghaensis MED134] Length = 201 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 96/165 (58%), Gaps = 9/165 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E+ P PE AF GRSNVGKSSLIN+L NRK+LA+TS PG+TQ +N F+ Sbjct: 8 FVVSNSEVSKCPNTRIPEYAFIGRSNVGKSSLINMLTNRKSLAKTSGRPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYAR KK+ + I Y +R + ++L+DCRH Sbjct: 68 NE---------NWHLVDLPGYGYARVSKKDKKYFQKFITDYFEQREQMISAFVLVDCRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++ID + ++ +K + + I+ TK DKL P + +E+ K ++ Sbjct: 119 PQKIDMEFMEYMGEKEIPFSIIFTKADKLRPQALERNIEEYKRIM 163 >gi|322387324|ref|ZP_08060934.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus infantis ATCC 700779] gi|321141853|gb|EFX37348.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus infantis ATCC 700779] Length = 195 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVTKAGMDQAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|221487174|gb|EEE25420.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 1466 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 7/185 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSNVGKSSL+N L R+ + ++ PG TQ L+FF + Sbjct: 450 LPPPTLPEIAFAGRSNVGKSSLLNELAGRRLTSLVTSRPGTTQQLHFFK-------AGSP 502 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + LVD+PGYG+A+A W + YL R LR V++L+D RHG+K+ D+++ Sbjct: 503 PVLCLVDLPGYGFAKAAAATRLQWTEFSLYYLKTRKNLRRVFVLVDARHGLKESDKEMLH 562 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 FL + VS+QIVLTK D + P +TL K + + + I S+++ + ++VLR Sbjct: 563 FLHRWGVSWQIVLTKADLVKPKDLVKTLMLVKEDAKAFRHQAADPIAVSALRHQALDVLR 622 Query: 204 KAILE 208 + + E Sbjct: 623 REMDE 627 >gi|237831355|ref|XP_002364975.1| GTP-binding conserved hypothetical domain-containing protein [Toxoplasma gondii ME49] gi|211962639|gb|EEA97834.1| GTP-binding conserved hypothetical domain-containing protein [Toxoplasma gondii ME49] gi|221506860|gb|EEE32477.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 1466 Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats. Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 7/185 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSNVGKSSL+N L R+ + ++ PG TQ L+FF + Sbjct: 450 LPPPTLPEIAFAGRSNVGKSSLLNELAGRRLTSLVTSRPGTTQQLHFFK-------AGSP 502 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + LVD+PGYG+A+A W + YL R LR V++L+D RHG+K+ D+++ Sbjct: 503 PVLCLVDLPGYGFAKAAAATRLQWTEFSLYYLKTRKNLRRVFVLVDARHGLKESDKEMLH 562 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 FL + VS+QIVLTK D + P +TL K + + + I S+++ + ++VLR Sbjct: 563 FLHRWGVSWQIVLTKADLVKPKDLVKTLMLVKEDAKAFRHQAADPIAVSALRHQALDVLR 622 Query: 204 KAILE 208 + + E Sbjct: 623 REMDE 627 >gi|331265986|ref|YP_004325616.1| GTP-binding protein, putative [Streptococcus oralis Uo5] gi|326682658|emb|CBZ00275.1| GTP-binding protein, putative [Streptococcus oralis Uo5] Length = 195 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVSKVGMDQAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|255004364|ref|ZP_05279165.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale str. Virginia] Length = 205 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 114/189 (60%), Gaps = 9/189 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ GV + LP PE+AF+GRSNVGKSSLIN + K AR S+ PG T+ +NF++ Sbjct: 7 FVAGVQDKHSLPDFQVPEVAFAGRSNVGKSSLINAVTKNKKGARVSSNPGSTRQINFYL- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N A+ALVD+PGYGY++A K++ S+ L+ YL R L + LLID + G Sbjct: 66 --------NEGALALVDLPGYGYSKASKESASSYMSLVEHYLLTREALHRLVLLIDSKVG 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D D S+L+++ + Y +VLTKID+L+ T + L + ++ +I TSS Sbjct: 118 LKEVDMDFISWLEERCIHYSLVLTKIDRLTCTEFNDVLSAVQSRVKGCCMLLHPIIGTSS 177 Query: 194 VKRKGIEVL 202 KGI+ L Sbjct: 178 KSGKGIKEL 186 >gi|322391569|ref|ZP_08065038.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus peroris ATCC 700780] gi|321145652|gb|EFX41044.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus peroris ATCC 700780] Length = 195 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 79/186 (42%), Positives = 101/186 (54%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVTKAGMDQAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|226324369|ref|ZP_03799887.1| hypothetical protein COPCOM_02150 [Coprococcus comes ATCC 27758] gi|225206817|gb|EEG89171.1| hypothetical protein COPCOM_02150 [Coprococcus comes ATCC 27758] Length = 200 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 75/175 (42%), Positives = 104/175 (59%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ N Sbjct: 18 LPDHTLPEIAFAGKSNVGKSSLINALMNRKALARTSAKPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 M LVD+PGYGYA+ ++ WG LI RYL LR V+LLID RH D+ ++ Sbjct: 69 EEMYLVDLPGYGYAKVSEQEKAQWGKLIERYLHGSKQLRAVFLLIDIRHDPSANDKMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ + + I+ TK+DKL + Q+ ++ K ++ P VIP S+ ++G Sbjct: 129 WIVDQGFNPIIIATKLDKLKRSQVQKQVKAIKTGLKLLPGT--VVIPFSAETKQG 181 >gi|56416888|ref|YP_153962.1| GTPase EngB [Anaplasma marginale str. St. Maries] gi|222475253|ref|YP_002563669.1| Probable GTP-binding protein engB [Anaplasma marginale str. Florida] gi|255003237|ref|ZP_05278201.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale str. Puerto Rico] gi|269958697|ref|YP_003328484.1| GTPase EngB [Anaplasma centrale str. Israel] gi|81359025|sp|Q5PAH3|ENGB_ANAMM RecName: Full=Probable GTP-binding protein EngB gi|254783183|sp|B9KIV1|ENGB_ANAMF RecName: Full=Probable GTP-binding protein EngB gi|56388120|gb|AAV86707.1| hypothetical protein AM764 [Anaplasma marginale str. St. Maries] gi|222419390|gb|ACM49413.1| Probable GTP-binding protein engB [Anaplasma marginale str. Florida] gi|269848526|gb|ACZ49170.1| GTPase EngB [Anaplasma centrale str. Israel] Length = 205 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 114/189 (60%), Gaps = 9/189 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ GV + LP PE+AF+GRSNVGKSSLIN + K AR S+ PG T+ +NF++ Sbjct: 7 FVAGVQDKHSLPDFQVPEVAFAGRSNVGKSSLINAVTKNKKGARVSSNPGSTRQINFYL- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N A+ALVD+PGYGY++A K++ S+ L+ YL R L + LLID + G Sbjct: 66 --------NEGALALVDLPGYGYSKASKESASSYMSLVEHYLLTREALHRLVLLIDSKVG 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D D S+L+++ + Y +VLTKID+L+ T + L + ++ +I TSS Sbjct: 118 LKEVDMDFISWLEERCIHYSLVLTKIDRLACTEFNDVLSAVQSRVKGCCMLLHPIIGTSS 177 Query: 194 VKRKGIEVL 202 KGI+ L Sbjct: 178 KSGKGIKEL 186 >gi|166031006|ref|ZP_02233835.1| hypothetical protein DORFOR_00687 [Dorea formicigenerans ATCC 27755] gi|166029273|gb|EDR48030.1| hypothetical protein DORFOR_00687 [Dorea formicigenerans ATCC 27755] Length = 196 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 107/176 (60%), Gaps = 11/176 (6%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 +LPK PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +N++ D Sbjct: 17 VLPKNTKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINYYSIND------- 69 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 M LVD+PGYGYA+ ++ WG LI RYL + L+ V+LLID RH + D+ ++ Sbjct: 70 --EMYLVDLPGYGYAKVSEQEKIKWGQLIERYLHSSAQLKAVFLLIDIRHAPSENDRIMY 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ ++ I+ TK+DK+ + Q+ ++ + ++ P +IP SS ++G Sbjct: 128 QWIVEQGFHPIIIATKLDKIKRSQVQKQMKVLREGLKLIPGT--TIIPFSSQTKQG 181 >gi|260589154|ref|ZP_05855067.1| ribosome biogenesis GTP-binding protein YsxC [Blautia hansenii DSM 20583] gi|331082570|ref|ZP_08331695.1| GTP-binding protein engB [Lachnospiraceae bacterium 6_1_63FAA] gi|260540574|gb|EEX21143.1| ribosome biogenesis GTP-binding protein YsxC [Blautia hansenii DSM 20583] gi|330400548|gb|EGG80178.1| GTP-binding protein engB [Lachnospiraceae bacterium 6_1_63FAA] Length = 201 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 75/178 (42%), Positives = 108/178 (60%), Gaps = 11/178 (6%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 +LP+ PEIAF+G+SNVGKSSLIN L+NRK+LARTS +PG+TQ +NF+ N Sbjct: 17 ILPENEVPEIAFAGKSNVGKSSLINALMNRKSLARTSASPGKTQTINFY---------NV 67 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 M LVD+PGYGYA+ + + WG LI RYL + L+ V+LLID RH + D+ ++ Sbjct: 68 NHEMYLVDLPGYGYAKVSQSVKEQWGKLIERYLHKSKQLKAVFLLIDIRHKPSENDKTMY 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ I+ TK DKL + Q+ L+ K + P ++IP S+ ++G E Sbjct: 128 DWIVYNGYQPIIIATKSDKLKRSQIQKQLKIIKEGLE-LPKG-AQIIPFSAQTKQGRE 183 >gi|332360756|gb|EGJ38564.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK355] Length = 195 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 80/188 (42%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K + + I SSV + G++ Sbjct: 132 LKYYDIPVILVATKADKIPRGKWNKHESAIKKKLDF----DKNDDFILFSSVTKDGLDAA 187 Query: 203 RKAILETI 210 AIL I Sbjct: 188 WDAILSKI 195 >gi|297569324|ref|YP_003690668.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurivibrio alkaliphilus AHT2] gi|296925239|gb|ADH86049.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurivibrio alkaliphilus AHT2] Length = 200 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 70/155 (45%), Positives = 92/155 (59%), Gaps = 9/155 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ V + LP PEIAF+GRSNVGKSSL+N L+ RKNL + S PG+TQ LNF++ Sbjct: 9 FVDSVFSLAQLPVGDLPEIAFAGRSNVGKSSLLNCLLRRKNLVKVSARPGKTQSLNFYLV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+AR K+ W LI YL R LRCV L+ID RH Sbjct: 69 GD---------QLHLVDLPGYGFARVDKRLQAKWQELITAYLETRPNLRCVVLIIDLRHA 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 +K+ D+ + +L + + + V TK DKLS Q Sbjct: 120 LKESDRMLAGWLQAQGIPWLPVYTKKDKLSRNQQQ 154 >gi|254995072|ref|ZP_05277262.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale str. Mississippi] Length = 205 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 114/189 (60%), Gaps = 9/189 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ GV + LP PE+AF+GRSNVGKSSLIN + K AR S+ PG T+ +NF++ Sbjct: 7 FVAGVQDKHSLPDFQVPEVAFAGRSNVGKSSLINAVTKNKKGARVSSNPGSTRQINFYL- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N A+ALVD+PGYGY++A K++ S+ L+ YL R L + LLID + G Sbjct: 66 --------NEGALALVDLPGYGYSKASKESASSYMSLVEHYLLTREALHRLVLLIDSKVG 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D D S+L+++ + Y +VLTKID+L+ T + L + ++ +I TSS Sbjct: 118 LKEVDMDFISWLEERCIHYSLVLTKIDRLTCTGFNDVLSAVQSRVKGCCMLLHPIIGTSS 177 Query: 194 VKRKGIEVL 202 KGI+ L Sbjct: 178 KSGKGIKEL 186 >gi|154506027|ref|ZP_02042765.1| hypothetical protein RUMGNA_03569 [Ruminococcus gnavus ATCC 29149] gi|153793526|gb|EDN75946.1| hypothetical protein RUMGNA_03569 [Ruminococcus gnavus ATCC 29149] Length = 206 Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ N Sbjct: 18 LPENEKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGYA+ +K WG LI RYL L+ V+LLID RH D+ ++ Sbjct: 69 EELYLVDLPGYGYAKVSEKEKIQWGNLIERYLHTSKQLKAVFLLIDIRHDPSANDKMMYQ 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ + I+ TK+DKL + Q+ ++ K + P +VIP SSV ++G Sbjct: 129 WIVDQGFQPIIIATKLDKLKRSQVQKHVKMLKTGLNLLPGT--KVIPFSSVTKQG 181 >gi|325295391|ref|YP_004281905.1| GTP-binding protein engB [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065839|gb|ADY73846.1| GTP-binding protein engB [Desulfurobacterium thermolithotrophum DSM 11699] Length = 194 Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 111/182 (60%), Gaps = 13/182 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ E+AF GRSNVGKSSL+N LVN +A+ S+ PG+T+ +NF++ D Sbjct: 18 LPQTPYKEVAFVGRSNVGKSSLLNTLVNNYKIAKVSSEPGKTRSVNFYLIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +VD+PGYG+A+ P K W LI +YL ER TL+ V+LL+D + G + D+ + Sbjct: 70 -KFFMVDLPGYGFAKVPFKEQKRWRDLIEKYLKERDTLKGVFLLVDSKVGPTEKDKQMKD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG-IEVL 202 +LD + Y +V TK+DKL + Q+ K + +++ + E+IP SS R+G +EVL Sbjct: 129 WLDFFGIPYVVVATKVDKLKSSEKQKLKRKVEEGLKD---KNLEIIPFSSKTREGRVEVL 185 Query: 203 RK 204 ++ Sbjct: 186 KR 187 >gi|291543933|emb|CBL17042.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus sp. 18P13] Length = 196 Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 12/185 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P EIAF+GRSNVGKS+LIN + NRKNLAR S PG+T +NF+ L Sbjct: 18 IPACSRMEIAFAGRSNVGKSTLINKIFNRKNLARVSAVPGKTATINFY----------QL 67 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYGYA+ K + W GLI YL+ +R ++LLID RH D + Sbjct: 68 EHVYFVDLPGYGYAKVAKSEKERWAGLIEGYLNSERDIRLIFLLIDMRHAPSADDLHMID 127 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + + + ++LTK DKL Q +E I + + VIP SS +G+E +R Sbjct: 128 YLVEAELPFVVILTKADKLKKMARQARMEAFAQEIPYF--SELTVIPFSSQTFEGVEQVR 185 Query: 204 KAILE 208 + I E Sbjct: 186 QIITE 190 >gi|255994399|ref|ZP_05427534.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium saphenum ATCC 49989] gi|255993112|gb|EEU03201.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium saphenum ATCC 49989] Length = 205 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 10/186 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEIAF+GRSNVGKSSL+N+L RK+LA+ S+ PG+T+ +NF+ D Sbjct: 18 FPDETLPEIAFAGRSNVGKSSLLNMLTGRKSLAKISSKPGKTRTINFYNVDD-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A +VD+PGYG+ARAP+ ++ W LI Y+ +R L V LID RH +D+ + Sbjct: 70 -AFRIVDLPGYGFARAPRSEMEKWAKLIETYIEKRGNLIAVTSLIDIRHDPTDLDRQLCL 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-YPTAHPEVIPTSSVKRKGIEVL 202 +L + + +VLTK DK+ + + L K ++ N Y IP S++KR+G E L Sbjct: 129 YLKEMNLLKTVVLTKADKIPKSQVNKKLGIVKKILSNEYDINGVRFIPVSALKRQGKEEL 188 Query: 203 RKAILE 208 +++ Sbjct: 189 MNELIK 194 >gi|322389612|ref|ZP_08063160.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis ATCC 903] gi|321143611|gb|EFX39041.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis ATCC 903] Length = 200 Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 81/190 (42%), Positives = 103/190 (54%), Gaps = 15/190 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH D ++ F Sbjct: 72 KLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K K T I SSV ++G+E Sbjct: 132 LKYYEIPVILVATKADKIPRGKWNKHESIIKKKLDFDPSDT----FIVFSSVTKEGLEKS 187 Query: 203 RKAILETINY 212 AILE Y Sbjct: 188 WDAILENAFY 197 >gi|255528414|ref|ZP_05395213.1| GTP-binding protein HSR1-related protein [Clostridium carboxidivorans P7] gi|296184881|ref|ZP_06853292.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium carboxidivorans P7] gi|255507895|gb|EET84336.1| GTP-binding protein HSR1-related protein [Clostridium carboxidivorans P7] gi|296050663|gb|EFG90086.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium carboxidivorans P7] Length = 195 Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 81/188 (43%), Positives = 107/188 (56%), Gaps = 13/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ EIAF GRSNVGKSSLIN LVNR+ L + S PG+T+ +NFF L NN Sbjct: 19 PQDNRVEIAFVGRSNVGKSSLINTLVNRRKLVKVSGTPGKTRLVNFF-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K +SWG +I RYL+ R L+ V LL+DCRH + D ++ + Sbjct: 70 EFYFVDLPGYGYAKVSKSEKESWGKVIERYLTGREQLKKVMLLVDCRHKPTEDDIIMYKW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-SSVKRKGIEVLR 203 + IV TKIDKL ++ L K + + + E I T SS+K+ G E L Sbjct: 130 IKHYNYDAIIVATKIDKLKKAELRKNL---KVIRETFELSDDEEILTFSSLKKLGKEELL 186 Query: 204 KAILETIN 211 AI + IN Sbjct: 187 DAIEQCIN 194 >gi|88607557|ref|YP_505024.1| GTPase EngB [Anaplasma phagocytophilum HZ] gi|119368790|sp|Q2GKS7|ENGB_ANAPZ RecName: Full=Probable GTP-binding protein EngB gi|88598620|gb|ABD44090.1| putative GTP-binding protein EngB [Anaplasma phagocytophilum HZ] Length = 193 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 68/150 (45%), Positives = 96/150 (64%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ GV + P G PE+AF+GRSNVGKSSLIN + N K A+TS+ PG T+ +NF++ Sbjct: 6 FVAGVQDRKSFPDFGVPEVAFAGRSNVGKSSLINAITNNKKNAKTSSNPGSTRQINFYLN 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K +ALVD+PGYGY++A K+ + ++ YL R L+ + LLID R G Sbjct: 66 KGI---------VALVDLPGYGYSKASKEATRGYLDVMEHYLMSREALQRLVLLIDSRIG 116 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K+ID+D +L++ + Y IVLTK DKLS Sbjct: 117 LKEIDRDFLCWLEEHGIYYSIVLTKADKLS 146 >gi|324992982|gb|EGC24902.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK405] gi|324995709|gb|EGC27621.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK678] gi|327462278|gb|EGF08605.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1] gi|327489631|gb|EGF21423.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1058] Length = 195 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/189 (41%), Positives = 101/189 (53%), Gaps = 17/189 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL---SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L + +V TK DK+ + ++K RN + I SSV + G++ Sbjct: 132 LKYYDIPVILVATKADKIPRGKWNKHESAIKKKLDFDRN-----DDFILFSSVTKDGLDA 186 Query: 202 LRKAILETI 210 AIL I Sbjct: 187 AWDAILSKI 195 >gi|322375631|ref|ZP_08050143.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. C300] gi|321279339|gb|EFX56380.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. C300] Length = 197 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/186 (41%), Positives = 100/186 (53%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 23 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 74 KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPSADDVQMYEF 133 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 134 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVTKAGMDQAWD 191 Query: 205 AILETI 210 ILE + Sbjct: 192 TILEKL 197 >gi|313206541|ref|YP_004045718.1| ribosome biogenesis GTP-binding protein ysxc [Riemerella anatipestifer DSM 15868] gi|312445857|gb|ADQ82212.1| ribosome biogenesis GTP-binding protein YsxC [Riemerella anatipestifer DSM 15868] gi|315023518|gb|EFT36522.1| GTP-binding protein EngB [Riemerella anatipestifer RA-YM] gi|325336011|gb|ADZ12285.1| Predicted GTPase [Riemerella anatipestifer RA-GD] Length = 208 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P+A PE AF GRSNVGKSSLIN + KNLA+TS PG+TQ +N F+ Sbjct: 9 FVKSSQKWQECPEANLPEYAFIGRSNVGKSSLINAITGNKNLAKTSQTPGKTQLINHFII 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L D+PGYGYA+ K + LI Y+ R L +++L+D RH Sbjct: 69 NE---------EWYLTDLPGYGYAKVSKTQRKDFEKLITNYILNRKNLVNLFILVDIRHT 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 ++ID + + + + + IV TK DKL P A++ +E TK L+ ++ A P++ TS Sbjct: 120 PQKIDLEFIEWCGESGIPFSIVFTKEDKLKPNAAKKNVEDYTKTLLESWEEA-PQMYITS 178 Query: 193 SVKRKGIEVLRKAILET 209 + K+ G E + + I +T Sbjct: 179 AEKKTGTEAILEYIEQT 195 >gi|319947000|ref|ZP_08021234.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus australis ATCC 700641] gi|319747048|gb|EFV99307.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus australis ATCC 700641] Length = 198 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/189 (41%), Positives = 102/189 (53%), Gaps = 15/189 (7%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P+ PE+A +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF N+ + Sbjct: 18 GHYPQDDIPEVALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF------NIDD 71 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D + Sbjct: 72 QL---RFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLRAVVSLVDLRHEPSADDVQM 128 Query: 142 FSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + FL + +V TK DK+ E++ K K T I SSV + G+ Sbjct: 129 YEFLKYYEIPVILVATKADKIPRGKWNKHESMIKKKLDFDKTDT----FIIFSSVNKTGV 184 Query: 200 EVLRKAILE 208 E AI + Sbjct: 185 EEAWDAIFD 193 >gi|313676939|ref|YP_004054935.1| ribosome biogenesis GTP-binding protein ysxc [Marivirga tractuosa DSM 4126] gi|312943637|gb|ADR22827.1| ribosome biogenesis GTP-binding protein YsxC [Marivirga tractuosa DSM 4126] Length = 203 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 105/187 (56%), Gaps = 10/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE AF GRSNVGKSSLIN+L +RKNLA+TS+ PG+TQ +N F+ + Sbjct: 20 PETDLPEYAFIGRSNVGKSSLINMLTDRKNLAKTSSKPGKTQLINHFLMDE--------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK + WG +I YL R L C+++LID R ++ D + F Sbjct: 71 KWYLVDLPGYGYAKVSKKTNEGWGKMISDYLKNRENLVCIFVLIDSRLPPQKADVEFLDF 130 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + K + ++ TK DK S Q+ + K + N P +S+ K+ G E + Sbjct: 131 IGKNGLPLSLIFTKADKQSNNKTQQNIAVFKKKMLNTWEEFPPYFVSSAEKQTGKEEIL- 189 Query: 205 AILETIN 211 I++ +N Sbjct: 190 GIIDQMN 196 >gi|332884603|gb|EGK04860.1| GTP-binding protein engB [Dysgonomonas mossii DSM 22836] Length = 201 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 71/174 (40%), Positives = 102/174 (58%), Gaps = 9/174 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE AF GRSNVGKSSLIN+L NRK LA TS+ PG+TQ +N F+ + Sbjct: 19 PQDGKPEYAFIGRSNVGKSSLINMLTNRKGLAMTSSKPGKTQLINHFIINN--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K + +I Y+ +R+ L C++LL+DCRH ++ID D ++ Sbjct: 70 EWYLVDLPGYGYAQRGKDGREQIRKIIDNYILKRTELTCLFLLLDCRHEPQKIDLDFINW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 L ++ + + IV TK DK+S ++ E + P + TSS +R G Sbjct: 130 LGEEGIPFVIVFTKTDKISKGRLKDNSEAYINKLHETWEEIPTIFYTSSEQRAG 183 >gi|24379393|ref|NP_721348.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans UA159] gi|290580605|ref|YP_003484997.1| putative GTP-binding protein [Streptococcus mutans NN2025] gi|81845282|sp|Q8DUH9|ENGB_STRMU RecName: Full=Probable GTP-binding protein EngB gi|24377323|gb|AAN58654.1|AE014935_6 putative GTP-binding protein [Streptococcus mutans UA159] gi|254997504|dbj|BAH88105.1| putative GTP-binding protein [Streptococcus mutans NN2025] Length = 197 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 84/211 (39%), Positives = 112/211 (53%), Gaps = 16/211 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S + T +A I L V + P+ PEIA +GRSNVGKSS IN L+ RKNLARTS+ Sbjct: 1 MSEFLNTHNASILLSAVNK-SHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSK 59 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG+TQ LNF+ D + VD+PGYGYA+ KK WG +I YL+ R L Sbjct: 60 PGKTQSLNFYNIDD---------KLRFVDVPGYGYAKVSKKERAKWGKMIEEYLTSRENL 110 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIR 179 R V L+D RH D ++ FL + +V TK DK+ QE+ K K Sbjct: 111 RAVVSLVDFRHDPSSDDVQMYDFLKYYEIPVILVATKADKVPRGKWNKQESAIKKKLDF- 169 Query: 180 NYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++ I SSV R G++ AILE++ Sbjct: 170 ---DSNDAFIIFSSVDRTGLDTSWDAILESL 197 >gi|298207894|ref|YP_003716073.1| GTP-binding protein [Croceibacter atlanticus HTCC2559] gi|83850535|gb|EAP88403.1| GTP-binding protein [Croceibacter atlanticus HTCC2559] Length = 202 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P+ PE AF GRSNVGKSSLIN++ N K LA+TS+ PG+TQ +N F+ Sbjct: 8 FVISNSDVDKCPQDKLPEYAFIGRSNVGKSSLINMMTNNKKLAKTSSTPGKTQLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYAR KK + I Y +RS L C ++L+D RH Sbjct: 68 ND---------EWYLVDLPGYGYARTSKKTKKVFQKFITDYFVKRSQLVCAFVLVDSRHA 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L ++ + I+ TK DKL + + PE TSS Sbjct: 119 PQKIDLEFMEWLGTNSIPFAIIFTKTDKLKKGEWDRNFKVYSSKMMETWAEMPEYFTTSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 + + G E + + I +TIN Sbjct: 179 LHKTGAEEVLEYI-DTIN 195 >gi|225166344|ref|ZP_03728026.1| GTPase EngB [Opitutaceae bacterium TAV2] gi|224799414|gb|EEG17961.1| GTPase EngB [Opitutaceae bacterium TAV2] Length = 213 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 109/198 (55%), Gaps = 13/198 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F + P + P G E AF GRSNVGKSSL+N+L +K+LA+ S PG+T+ +NFF Sbjct: 23 VFEKSAPNLATSPVWGCREFAFIGRSNVGKSSLLNLLTEQKDLAKVSATPGKTRMINFF- 81 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + N A +LVD+PGYG+A+ + + + RYL +R L CV++LID R Sbjct: 82 -----KINN---AWSLVDLPGYGFAKVAQHKRSDFNQAVARYLEKRDNLACVFVLIDSRL 133 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +QID D +L+ + ++ TK DK SPT + + + + T P ++ +S Sbjct: 134 PPQQIDLDFIQWLEGTGRPFALIFTKTDKQSPTQTRAKISLFTEALAEWRTEPPPILTSS 193 Query: 193 SVKRKGIEVLRKAILETI 210 S + G R+ ILE I Sbjct: 194 SKTKSG----RREILEFI 207 >gi|296331634|ref|ZP_06874103.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675407|ref|YP_003867079.1| putative ribosome biogenesis GTP-binding protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296151229|gb|EFG92109.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413651|gb|ADM38770.1| putative ribosome biogenesis GTP-binding protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 195 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 107/189 (56%), Gaps = 15/189 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYG+A+ K ++WG +I Y++ R L+ V ++D RH D ++ F Sbjct: 70 ALHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVL 202 L + ++ TK DK+ + +K ++R P E+I SS +KG + Sbjct: 130 LKYYGIPVIVIATKADKI----PKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEA 185 Query: 203 RKAILETIN 211 AI + IN Sbjct: 186 WGAIKKMIN 194 >gi|309799590|ref|ZP_07693816.1| GTP-binding protein [Streptococcus infantis SK1302] gi|308116778|gb|EFO54228.1| GTP-binding protein [Streptococcus infantis SK1302] Length = 195 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/186 (41%), Positives = 100/186 (53%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYAR K + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KMRFVDVPGYGYARVSKNEREKWGRMIEEYLTTRENLRAVVSLVDLRHDPTADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + P+ + I SSV + G++ Sbjct: 132 LKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSVTKAGMDQAWD 189 Query: 205 AILETI 210 AILE + Sbjct: 190 AILEKL 195 >gi|325687396|gb|EGD29417.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK72] Length = 195 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K + + I SSV + G++ Sbjct: 132 LKYYDIPVVLVATKADKIPRGKWNKHESAIKKKLDF----DKNDDFILFSSVTKDGLDAA 187 Query: 203 RKAILETI 210 AIL I Sbjct: 188 WDAILSKI 195 >gi|262282293|ref|ZP_06060061.1| GTPase EngB [Streptococcus sp. 2_1_36FAA] gi|262261584|gb|EEY80282.1| GTPase EngB [Streptococcus sp. 2_1_36FAA] Length = 197 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/189 (43%), Positives = 103/189 (54%), Gaps = 15/189 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF N+ N L Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF------NIDNKL- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ R LR V L+D RH D ++ F Sbjct: 74 --RFVDVPGYGYAKVSKTERAKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K N+ A I SSV + GI+ Sbjct: 132 LKYYEIPVILVATKADKIPRGKWNKHESAIKKKL---NFDPADT-FILFSSVDKTGIDAS 187 Query: 203 RKAILETIN 211 AILE +N Sbjct: 188 WNAILEKVN 196 >gi|325689772|gb|EGD31776.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK115] gi|325694580|gb|EGD36489.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK150] gi|325696428|gb|EGD38318.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK160] Length = 195 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/189 (41%), Positives = 101/189 (53%), Gaps = 17/189 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL---SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L + +V TK DK+ + ++K RN + I SSV + G++ Sbjct: 132 LKYYDIPVILVATKADKIPRGKWNKHESAIKKKLDFDRN-----DDFILFSSVTKDGLDA 186 Query: 202 LRKAILETI 210 AIL I Sbjct: 187 SWDAILSKI 195 >gi|260911896|ref|ZP_05918462.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 472 str. F0295] gi|260634012|gb|EEX52136.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 472 str. F0295] Length = 201 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/195 (40%), Positives = 104/195 (53%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P IGL PK E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTLSAPSIGLCPKDNKIEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+A+ K +I Y+ +R L +++LID RH Sbjct: 68 ND---------SWYLVDLPGYGFAKRSKTVQQKLQQMISSYILQREQLVNLFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + V + IV TK DKL A++ EK + + P TSS Sbjct: 119 QQKIDREFIDWLGESGVPFTIVFTKADKLGLVKAKQNAEKWMKQLEDSWEEQPPYFITSS 178 Query: 194 VKRKGIEVLRKAILE 208 KR G E L I E Sbjct: 179 EKRIGREELLNYIDE 193 >gi|150026105|ref|YP_001296931.1| GTPase EngB [Flavobacterium psychrophilum JIP02/86] gi|166225953|sp|A6H1A5|ENGB_FLAPJ RecName: Full=Probable GTP-binding protein EngB gi|149772646|emb|CAL44129.1| Probable GTP-binding protein EngB [Flavobacterium psychrophilum JIP02/86] Length = 205 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/189 (40%), Positives = 104/189 (55%), Gaps = 10/189 (5%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + L P+ PE AF GRSNVGKSSLIN+L N K+LA+TS PG+TQ +N F + Sbjct: 15 VSLCPQEHLPEYAFIGRSNVGKSSLINMLTNHKSLAKTSGRPGKTQLINHF------KIN 68 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 NN LVD+PGYGYA+ KK + + I Y +R L C ++LID RH ++ID + Sbjct: 69 NN---WFLVDLPGYGYAKVSKKTKEVFQQFITDYFEKREQLVCAFVLIDIRHEAQKIDLE 125 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 ++L + + + IV TK DK+S AQ L++N P TS+ + G Sbjct: 126 FITYLGEIELPFCIVFTKADKISKGKVAQHVAAYRTALLKNNWEEMPHHFVTSATEHTGK 185 Query: 200 EVLRKAILE 208 E L I E Sbjct: 186 ESLLSYIDE 194 >gi|301057780|ref|ZP_07198849.1| ribosome biogenesis GTP-binding protein YsxC [delta proteobacterium NaphS2] gi|300448091|gb|EFK11787.1| ribosome biogenesis GTP-binding protein YsxC [delta proteobacterium NaphS2] Length = 198 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/185 (41%), Positives = 108/185 (58%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + PE+AF+G+SNVGKSSLIN L R+ LARTS+ PGRTQ +NFF F Sbjct: 16 PPSDRPEVAFAGKSNVGKSSLINTLTGRRKLARTSSTPGRTQAINFF---RFGK------ 66 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYG+AR P K SWG ++ YL R TL+ V +++D R D D+ ++ Sbjct: 67 TLYLVDLPGYGFARVPMKVKKSWGLMVEDYLRSRQTLKAVVVILDIRRDPSAGDADLINW 126 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L+ + +VLTK DK+S A + + K ++ + P + SS R+G+E L K Sbjct: 127 LNYYHIVPIVVLTKADKVSRQQAGKRTARIKKSLKGVSFSAPVLF--SSHTRQGVEDLWK 184 Query: 205 AILET 209 I ET Sbjct: 185 RINET 189 >gi|210621785|ref|ZP_03292814.1| hypothetical protein CLOHIR_00759 [Clostridium hiranonis DSM 13275] gi|210154549|gb|EEA85555.1| hypothetical protein CLOHIR_00759 [Clostridium hiranonis DSM 13275] Length = 203 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 106/185 (57%), Gaps = 13/185 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P G PEIA +GRSNVGKSSL N L+NR+N ARTS+ PG+T+ +NF+ + K+F Sbjct: 19 PTDGIPEIALAGRSNVGKSSLTNALLNRRNFARTSSTPGKTRTINFYLINKEF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ K D WG ++ RYL +R L ++LL+D RH D+ ++ Sbjct: 72 ---FFVDLPGYGYAKVAKSEKDKWGQVMERYLQDRDELCAIFLLVDIRHEPTADDKMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ +V TK DK+S + L + ++ ++IP SS K+ GIE L Sbjct: 129 WIKYYGYDCVVVATKADKISRGQYLKHLSVIRKKLQ--LEKDEKIIPVSSSKKTGIEELW 186 Query: 204 KAILE 208 I+E Sbjct: 187 SEIVE 191 >gi|253579812|ref|ZP_04857080.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848811|gb|EES76773.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 201 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +NF+ N Sbjct: 18 LPDTNRPEVAFAGKSNVGKSSLINGLMNRKSLARTSAQPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 AM LVD+PGYGYA+ + + WG +I RYL L+ V+LLID RH D+ ++ Sbjct: 69 EAMYLVDLPGYGYAKVSQSEKEKWGKMIERYLHTSKNLKAVFLLIDIRHDPSANDKMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ I+ TK+DKL + Q+ ++ K ++ + +IP S+ ++G Sbjct: 129 WILNNGYEPIIIATKLDKLKRSQVQKNIKAIKEGLK--LSKDGIIIPFSAETKQG 181 >gi|304440711|ref|ZP_07400595.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370898|gb|EFM24520.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus duerdenii ATCC BAA-1640] Length = 200 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 11/188 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P EIAF+GRSNVGKSS IN ++ RKNLARTS++PG+T+ +NF+ N Sbjct: 19 PDENLMEIAFAGRSNVGKSSFINSMLGRKNLARTSSSPGKTRTINFY---------NIDE 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K+ SW +I YL R L+ V+LL+D RH + D ++F F Sbjct: 70 KLRLVDLPGYGYAKVSKEEKSSWAKIINEYLESRENLKEVFLLVDIRHDPTKQDIEMFRF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + +V TK DK+S + A ++ +++ T + +IP SSV + ++ + Sbjct: 130 IKEAGFVGIVVATKSDKISKSKAITQIKNIAKVLKTENTDY--IIPYSSVDKNMVDEMWM 187 Query: 205 AILETINY 212 I + + Y Sbjct: 188 VIKDLLEY 195 >gi|125717924|ref|YP_001035057.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK36] gi|166226980|sp|A3CMV2|ENGB_STRSV RecName: Full=Probable GTP-binding protein EngB gi|125497841|gb|ABN44507.1| GTP-binding protein, putative [Streptococcus sanguinis SK36] gi|327460432|gb|EGF06769.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1057] gi|327470115|gb|EGF15579.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK330] Length = 195 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K + + I SSV + G++ Sbjct: 132 LKYYDIPVILVATKADKIPRGKWNKHESAIKKKLDF----DKNDDFILFSSVTKDGLDAA 187 Query: 203 RKAILETI 210 AIL I Sbjct: 188 WDAILSKI 195 >gi|324991226|gb|EGC23160.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK353] gi|328946143|gb|EGG40288.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1087] Length = 195 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K + + I SSV + G++ Sbjct: 132 LKYYNIPVILVATKADKIPRGKWNKHESAIKKKLDF----DKNDDFILFSSVTKDGLDAA 187 Query: 203 RKAILETI 210 AIL I Sbjct: 188 WDAILSKI 195 >gi|194017131|ref|ZP_03055743.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pumilus ATCC 7061] gi|194010999|gb|EDW20569.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pumilus ATCC 7061] Length = 195 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PSGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+A+ K ++WG +I Y++ R L+ V ++D RH D +++ F Sbjct: 71 -LHFVDVPGYGFAKVSKTEREAWGRMIETYITMREELKAVVQIVDLRHKPSVDDVNMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L V ++ TK DK+ ++ + K + P+ E++ SS +KG + Sbjct: 130 LKYYGVPVIVIATKADKIPKGKWEKHAKVVKQTLDIAPS--DELVLFSSETKKGKDEAWN 187 Query: 205 AILETIN 211 AIL IN Sbjct: 188 AILAKIN 194 >gi|126663224|ref|ZP_01734222.1| GTPase EngB [Flavobacteria bacterium BAL38] gi|126624882|gb|EAZ95572.1| GTPase EngB [Flavobacteria bacterium BAL38] Length = 206 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/199 (40%), Positives = 107/199 (53%), Gaps = 14/199 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E+ PK PE AF GRSNVGKSSLIN+L N KNLA+TS+ PG+TQ +N F Sbjct: 8 FVISNSEVDKCPKERLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSSKPGKTQLINHF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + NN LVD+PGYGYAR KK + I+ Y +R L C ++LID R Sbjct: 66 ----KINNN---WFLVDLPGYGYARVSKKTKAVFQQFIMDYFEQREQLVCAFVLIDIRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 ++ID + +L + + + I+ TK DKL +E K L+ P TS Sbjct: 119 AQKIDLEFMEYLGESEIPFAIIFTKSDKLGKNKVNNHVEAYKKQLLAGDWAEMPPYFVTS 178 Query: 193 SVKRKGIEVLRKAILETIN 211 S++ G R+ ILE IN Sbjct: 179 SLEAIG----REGILEYIN 193 >gi|157693221|ref|YP_001487683.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pumilus SAFR-032] gi|166920109|sp|A8FFV6|ENGB_BACP2 RecName: Full=Probable GTP-binding protein EngB gi|157681979|gb|ABV63123.1| possible GTPase [Bacillus pumilus SAFR-032] Length = 195 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PSGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+A+ K ++WG +I Y++ R L+ V ++D RH D +++ F Sbjct: 71 -LHFVDVPGYGFAKVSKTEREAWGRMIETYITMREELKAVVQIVDLRHKPSVDDVNMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L V ++ TK DK+ ++ + K + P+ E++ SS +KG + Sbjct: 130 LKYYGVPVIVIATKADKIPKGKWEKHAKVVKQTLDIAPS--DELVLFSSETKKGKDEAWN 187 Query: 205 AILETIN 211 AIL IN Sbjct: 188 AILAKIN 194 >gi|145219093|ref|YP_001129802.1| GTPase EngB [Prosthecochloris vibrioformis DSM 265] gi|189037185|sp|A4SCU1|ENGB_PROVI RecName: Full=Probable GTP-binding protein EngB gi|145205257|gb|ABP36300.1| GTP-binding protein, HSR1-related protein [Chlorobium phaeovibrioides DSM 265] Length = 191 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/185 (40%), Positives = 104/185 (56%), Gaps = 13/185 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R V ++ LP+ PEI F+GRSNVGKSSL+N L RK LA+TS+ PG+T+ +N+F+ Sbjct: 8 FVRSVSDLSDLPEESFPEIVFAGRSNVGKSSLLNSLTGRKGLAKTSSTPGKTRLINYFL- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L +NL VD+PGYGYA D+WG L+ Y+ +R+ + V LL+D RH Sbjct: 67 -----LNDNL---YFVDIPGYGYAAVSHAEKDAWGRLLAGYVGDRAAIALVVLLLDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+D+ FL Y IVLTK DKL+ T+ N ++ SS Sbjct: 119 AMKSDRDMMDFLAYHDRPYGIVLTKDDKLTQKERTHAKRATESCAMNAGF----IVSYSS 174 Query: 194 VKRKG 198 V KG Sbjct: 175 VSGKG 179 >gi|332366631|gb|EGJ44374.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1059] Length = 195 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K + + I SSV + G++ Sbjct: 132 LKYYDIPVILVATKADKIPRGKWNKHESAIKKKLDF----DKNDDFILFSSVTKDGLDTA 187 Query: 203 RKAILETI 210 AIL I Sbjct: 188 WDAILSKI 195 >gi|325679699|ref|ZP_08159273.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 8] gi|324108514|gb|EGC02756.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 8] Length = 242 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 109/198 (55%), Gaps = 14/198 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + +PK+ PE AFSGRSNVGKSSLIN + NRKN+AR S+ PG+T +NFF Sbjct: 11 FVTSYGKFSQIPKSDRPEFAFSGRSNVGKSSLINKIFNRKNMARVSSVPGKTVTINFFSV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRH 132 +D + VD+PGYGYA K WG LI YL + + V+ LID RH Sbjct: 71 ED----------VYFVDLPGYGYANVSKAEKGKWGELIGGYLGDFERYVEIVFQLIDMRH 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + ++L + + IVLTK DKL PT + + I + H IP S Sbjct: 121 APSKDDIQMINYLIDNEMPFVIVLTKADKLKPTARKARMAAFAEEIPCFEDIH--CIPFS 178 Query: 193 SVKRKGIEVLRKAILETI 210 +V +G++ L KA++E + Sbjct: 179 AVTGEGVDEL-KAVIEEV 195 >gi|254490408|ref|ZP_05103595.1| putative GTPase [Methylophaga thiooxidans DMS010] gi|224464374|gb|EEF80636.1| putative GTPase [Methylophaga thiooxydans DMS010] Length = 219 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 107/182 (58%), Gaps = 10/182 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 ++ LP+ E+AF+GRSN GKSS IN + ++LARTS PGRTQ +NFF D Sbjct: 30 QLSQLPEDTGFEVAFAGRSNAGKSSAINTITGIRSLARTSKTPGRTQMINFFHFDD---- 85 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 ALVD+PGYGYA+ P+K W + +YL R +LR + +++D RH +K+ D Sbjct: 86 -----QRALVDLPGYGYAKVPEKMKQKWQQTLAKYLETRQSLRGLMMMMDVRHPLKEFDL 140 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + S+ ++ +S I+LTK DKL + A+++L K ++N+ V SS+ + G Sbjct: 141 QMLSWANQADLSVHILLTKADKLKNSAAKQSLLKVVAELKNHDL-KASVQLFSSLNKSGR 199 Query: 200 EV 201 ++ Sbjct: 200 DI 201 >gi|332292523|ref|YP_004431132.1| ribosome biogenesis GTP-binding protein YsxC [Krokinobacter diaphorus 4H-3-7-5] gi|332170609|gb|AEE19864.1| ribosome biogenesis GTP-binding protein YsxC [Krokinobacter diaphorus 4H-3-7-5] Length = 203 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 9/165 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E+ P PE AF GRSNVGKSSLIN+L NRK+LA+TS PG+TQ +N F+ Sbjct: 8 FVVSNSEVTKCPNTRIPEYAFIGRSNVGKSSLINMLTNRKSLAKTSGRPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYAR KK+ + I Y +R + ++L+DCRH Sbjct: 68 NE---------NWHLVDLPGYGYARVSKKDKKYFQKFITDYFEQREQMISAFVLVDCRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++ID + +L +K + + I+ TK DKL P + +E K ++ Sbjct: 119 PQKIDMEFMEYLGEKEIPFSIIFTKADKLRPQALERNIEVYKKIM 163 >gi|313884146|ref|ZP_07817912.1| ribosome biogenesis GTP-binding protein YsxC [Eremococcus coleocola ACS-139-V-Col8] gi|312620593|gb|EFR32016.1| ribosome biogenesis GTP-binding protein YsxC [Eremococcus coleocola ACS-139-V-Col8] Length = 198 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/182 (40%), Positives = 104/182 (57%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ Sbjct: 19 PQDQLPEVALAGRSNVGKSSFINSLIARKNLARTSSQPGKTQTLNFYAINQ--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A VD+PGYGYAR K +W +I +YLS+R + ++LL+D RH ++D+++ F Sbjct: 70 AFRFVDVPGYGYARVSKDFRLAWSKMIEKYLSQRENMELLFLLMDMRHEPTRLDREMKDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + Y IVLTK DK+ P + + L K + P+ + P S+ K G E + Sbjct: 130 AENLDLPYAIVLTKADKIKPASWNKHLSMYKKALE-LPSVDA-LFPYSATKGYGKEEIWD 187 Query: 205 AI 206 I Sbjct: 188 VI 189 >gi|66827277|ref|XP_646993.1| hypothetical protein DDB_G0268824 [Dictyostelium discoideum AX4] gi|60475065|gb|EAL73001.1| hypothetical protein DDB_G0268824 [Dictyostelium discoideum AX4] Length = 432 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 116/211 (54%), Gaps = 11/211 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 + ++ F+K A + + + PK P++AF G+SNVGKS+L+N ++ R++LA S Sbjct: 204 LFANVFFSKEASLDTMAIKSVDF-PKKHFPQVAFLGKSNVGKSTLLNSVL-RRDLAYVSK 261 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 + G T+ +NF+ + LVD+PGYG+A+ KK WG I +L Sbjct: 262 SAGCTKTINFY---------QIWEKLYLVDLPGYGFAKVSKKKSTVWGNAISEFLLTSPN 312 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L V+LLID R+ + + D + S LD+ VS+QIVLTKIDK +P+ + K I+ Sbjct: 313 LFKVFLLIDSRNKIHKNDIEAMSLLDQHKVSFQIVLTKIDKTTPSMLRSLYGSLKEEIQK 372 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 P +I TSSV KGI+ +R IL N Sbjct: 373 TTCCLPTIIQTSSVDSKGIDDIRTTILNVTN 403 >gi|212551105|ref|YP_002309422.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549343|dbj|BAG84011.1| GTPase EngB [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 209 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/198 (39%), Positives = 116/198 (58%), Gaps = 12/198 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F+ G ++G P+ G PE AF GRSNVGKSSLIN+L +K LA TS+ PG+TQ +N+F Sbjct: 15 VFVVGNTDVGKCPRDGFPEYAFIGRSNVGKSSLINMLTGQKGLALTSSIPGKTQLINYF- 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCR 131 L NN LVD+PGYGYA+ K+ + +I YL +R L C+++LIDCR Sbjct: 74 ------LINN--EWYLVDLPGYGYAQGGKQKRRTLQRIIDNYLCQRKKELTCIFVLIDCR 125 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTAHPEVIP 190 H ++ D + L + IV TKIDKLS + +E ++ + L++N+ P + Sbjct: 126 HNPQKNDTEFIQQLGGNGFPFVIVFTKIDKLSNKSLKENIDVYQSTLLKNWEEL-PSIFV 184 Query: 191 TSSVKRKGIEVLRKAILE 208 TSS ++ G + + I E Sbjct: 185 TSSERKIGRDEILNYIEE 202 >gi|332878394|ref|ZP_08446117.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683659|gb|EGJ56533.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 200 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 103/196 (52%), Gaps = 9/196 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ PK PE AF GRSNVGKSSLIN+L N KNLA+TS PG+TQ +N F Sbjct: 7 FVMSNSQVAKCPKDRLPEYAFIGRSNVGKSSLINMLTNCKNLAKTSGRPGKTQLINHFKI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYAR K + I Y +R L ++L+D RH Sbjct: 67 DD---------RWFLVDLPGYGYARVSKTTKQVFQRFITDYFEQREQLVSAFVLVDIRHE 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L ++A+ + I+ TK DKL P + + K + + P TS+ Sbjct: 118 PQKIDVEFMQWLGERAIPFAIIFTKADKLKPQAIERNVAAYKEALLEWWEEFPPYFVTSA 177 Query: 194 VKRKGIEVLRKAILET 209 + G E L + I +T Sbjct: 178 QNKTGKEELTQYIEQT 193 >gi|253575676|ref|ZP_04853012.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. oral taxon 786 str. D14] gi|251845014|gb|EES73026.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. oral taxon 786 str. D14] Length = 214 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 66/148 (44%), Positives = 93/148 (62%), Gaps = 9/148 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSSLIN ++NRKNLARTS+ PG+TQHLN++ D Sbjct: 19 PEDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQHLNYYRVND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + WG +I +YL ER TL+ V +ID RH + D+ ++ + Sbjct: 70 RLYFVDVPGYGYAKVSKSQREVWGKMIEKYLQERETLKLVLQIIDLRHPPTKDDELMYDW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLE 172 L + +V TK DK+ + Q+ L+ Sbjct: 130 LKAYELPVCVVATKADKVPKSRWQKHLK 157 >gi|91206092|ref|YP_538447.1| GTPase EngB [Rickettsia bellii RML369-C] gi|157826475|ref|YP_001495539.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia bellii OSU 85-389] gi|119369249|sp|Q1RH06|ENGB_RICBR RecName: Full=Probable GTP-binding protein EngB gi|166225974|sp|A8GUK6|ENGB_RICB8 RecName: Full=Probable GTP-binding protein EngB gi|91069636|gb|ABE05358.1| Hypothetical GTP-binding protein [Rickettsia bellii RML369-C] gi|157801779|gb|ABV78502.1| GTPase EngB [Rickettsia bellii OSU 85-389] Length = 212 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 109/198 (55%), Gaps = 14/198 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G +I LP P+IAF G+SNVGKSSLIN + N K LA+ SN PGRT+ +NFF Sbjct: 24 FVAGAMDIKQLPNFALPQIAFVGKSNVGKSSLINTICNNKKLAKVSNTPGRTRQINFF-- 81 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N + + +VD+PGYG+A+ P + D W LI YL + L+ V LLID R G Sbjct: 82 -------NLVDKLIIVDLPGYGFAQVPNQVKDQWEILINHYLRKSDNLKLVNLLIDSRRG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIPTS 192 +K+ D+ V L +QI+ TK DK++ LE +L NY +I S Sbjct: 135 IKENDKKVAELLLANKRDFQIIFTKSDKVTD-RKNLNLEAQNFLATLNYSC---NLIYVS 190 Query: 193 SVKRKGIEVLRKAILETI 210 S ++G L+ ++ + I Sbjct: 191 SRSKEGARELKTSLAKCI 208 >gi|134300397|ref|YP_001113893.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum reducens MI-1] gi|172044336|sp|A4J7L5|ENGB_DESRM RecName: Full=Probable GTP-binding protein EngB gi|134053097|gb|ABO51068.1| small GTP-binding protein [Desulfotomaculum reducens MI-1] Length = 205 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 81/193 (41%), Positives = 110/193 (56%), Gaps = 16/193 (8%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P PE+AF GRSNVGKSSLIN +VNRK LA+TS+ PGRTQ +NFF N+ N Sbjct: 16 GGYPPGNLPEVAFVGRSNVGKSSLINKVVNRKGLAKTSSTPGRTQLINFF------NINN 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + +VD+PGYGYA+ P WG +I YL ER L+ V LLID RH D+ + Sbjct: 70 D--QFLMVDLPGYGYAKVPTDVRIKWGKMIEGYLKERECLKGVVLLIDSRHTPTAQDKQM 127 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTT---AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + +L V +V TK+DKLS Q ++K+ L + + ++I S+ +G Sbjct: 128 YEWLQYYHVPTVVVATKVDKLSNNQWAKQQAVIKKSLPLSKEH-----QLISFSAETGRG 182 Query: 199 IEVLRKAILETIN 211 E L K + E I+ Sbjct: 183 KEKLLKVLDEFIH 195 >gi|295092437|emb|CBK78544.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium cf. saccharolyticum K10] Length = 205 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 15/188 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE AF+G+SNVGKSSLIN L+NRK+ ARTS PG+TQ +NF+ D Sbjct: 18 LPANTQPEFAFAGKSNVGKSSLINALMNRKSYARTSAQPGKTQTINFYHIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A+ VD+PGYGYARA ++ WG +I YL + L+CV+LLID RH + D+ ++S Sbjct: 70 -ALYYVDLPGYGYARANEEVKAKWGKMIENYLHKSPMLKCVFLLIDIRHEPSENDRLMYS 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEV 201 ++ + I+ TK+DKL + + ++ ++R PE +IP S+ ++G E Sbjct: 129 WIQNQGYRPVIIATKLDKLKRSQVAKHVK----MVRTGLGMEPEDLLIPFSAETKQGREK 184 Query: 202 LRKAILET 209 + I +T Sbjct: 185 IWDFIEKT 192 >gi|323351644|ref|ZP_08087298.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis VMC66] gi|322122130|gb|EFX93856.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis VMC66] Length = 195 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K + + I SSV + G++ Sbjct: 132 LRYYNIPVILVATKADKIPRGKWNKHESAIKKKLDF----DKNDDFILFSSVTKDGLDAA 187 Query: 203 RKAILETI 210 AIL I Sbjct: 188 WDAILSKI 195 >gi|298714913|emb|CBJ27669.1| YihA4, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 677 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 8/188 (4%) Query: 14 FLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++G + LPK PE AF GRSNVGKSSLIN++ NRK LA TS PG+TQ N+F+ Sbjct: 419 FVKGAVSMATLPKEPVLPEAAFIGRSNVGKSSLINMVCNRKALAFTSKRPGKTQQFNYFL 478 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + N A LVD+PG GYA+ P+K W L Y++ RS+LR ++ LID RH Sbjct: 479 MNN-----NTENAFYLVDLPGMGYAKVPEKQRKEWSTLFRSYITRRSSLRVLFHLIDGRH 533 Query: 133 GVKQIDQDVFSFLDK--KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 G D + + + Y +VLTK DK + +++ LE +R + V+ Sbjct: 534 GPVGQDHAIMKLMAELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRTPVVL 593 Query: 191 TSSVKRKG 198 TS+ + G Sbjct: 594 TSAASKLG 601 >gi|327474151|gb|EGF19561.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK408] Length = 195 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K + + I SSV + G++ Sbjct: 132 LKYYNIPVILVATKADKIPRGKWNKHESAIKKKLDF----DKNDDFILFSSVTKDGLDAS 187 Query: 203 RKAILETI 210 AIL I Sbjct: 188 WDAILSKI 195 >gi|124005837|ref|ZP_01690675.1| GTP-binding protein [Microscilla marina ATCC 23134] gi|123988520|gb|EAY28161.1| GTP-binding protein [Microscilla marina ATCC 23134] Length = 200 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/193 (38%), Positives = 104/193 (53%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PE AF GRSNVGKSSLIN L NRK+LA+TS PG+TQ +N F+ Sbjct: 8 FIKSSTDYTQCPAVHQPEYAFIGRSNVGKSSLINKLTNRKSLAKTSQNPGKTQTINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+A K WG +I Y+ +R L +++LID RH Sbjct: 68 ND---------RWHLVDLPGYGYAKASKTERKKWGKMINDYILKREVLLGIFVLIDARHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L ++ V + +V TK DKLS + + + I P TSS Sbjct: 119 PQKIDLEFLEWLGEERVPFTMVFTKSDKLSSNKLPQAIASYRKAILRTWEEMPTHFVTSS 178 Query: 194 VKRKGIEVLRKAI 206 V G + + K I Sbjct: 179 VSGLGCDEILKFI 191 >gi|52081302|ref|YP_080093.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus licheniformis ATCC 14580] gi|52786681|ref|YP_092510.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus licheniformis ATCC 14580] gi|319647215|ref|ZP_08001437.1| GTPase EngB [Bacillus sp. BT1B_CT2] gi|81825232|sp|Q65GJ7|ENGB_BACLD RecName: Full=Probable GTP-binding protein EngB gi|52004513|gb|AAU24455.1| GTP-binding domain,Small GTP-binding protein domain [Bacillus licheniformis ATCC 14580] gi|52349183|gb|AAU41817.1| YsxC [Bacillus licheniformis ATCC 14580] gi|317390562|gb|EFV71367.1| GTPase EngB [Bacillus sp. BT1B_CT2] Length = 195 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 86/138 (62%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIA +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PEGGLPEIALAGRSNVGKSSFINTMINRKNLARTSSKPGKTQTLNFYIIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+A+ K ++WG +I YL+ R L+ V ++D RH Q D ++ F Sbjct: 70 VLHFVDVPGYGFAKVSKTEREAWGRMIETYLTSREELKAVVQIVDLRHAPSQDDVMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + ++ TK DK+ Sbjct: 130 LKHYEIPVIVIATKADKI 147 >gi|119369278|sp|Q5GSS9|ENGB_WOLTR RecName: Full=Probable GTP-binding protein EngB Length = 197 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 8/167 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G +I LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +NF+ Sbjct: 11 FMFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFY-- 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ N+ LVD+PGYG + A K + GL+ YL R LR V++LID + Sbjct: 69 ----SMYND--KFRLVDLPGYGCSHASKDETIQYLGLVEYYLIHRRNLRRVFVLIDSKVR 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 +K+ID+D +L +++ +VLTKIDK+ +E T+ I N Sbjct: 123 LKEIDKDFIYWLTYNNINFDVVLTKIDKVDRENLDAIIESTRKWINN 169 >gi|282883087|ref|ZP_06291687.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus lacrimalis 315-B] gi|281297064|gb|EFA89560.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus lacrimalis 315-B] Length = 198 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 101/178 (56%), Gaps = 11/178 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF+GRSNVGKSS IN ++ RKNLARTS+ PG+T+ +NF+ D Sbjct: 19 PANNLPEFAFAGRSNVGKSSFINAMLGRKNLARTSSTPGKTRTINFYKVND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ KK DSW +I YL R L LL+D RH Q+D ++ + Sbjct: 70 DLRLVDLPGYGYAKVSKKEKDSWANIINEYLETRENLLETILLVDIRHDPTQLDIQMYDY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L S ++ TK DK+S ++ ++ ++ ++ +IP SSV + ++ L Sbjct: 130 LLASGFSGIVIATKKDKISKSSVKKNIDNIARKLK--APVKENIIPFSSVDKDEVDEL 185 >gi|326790234|ref|YP_004308055.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium lentocellum DSM 5427] gi|326540998|gb|ADZ82857.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium lentocellum DSM 5427] Length = 196 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/203 (38%), Positives = 113/203 (55%), Gaps = 17/203 (8%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 TK+ I G+ P PEIAF+G+SNVGKSSL+N ++NRK LARTS+ PG+TQ Sbjct: 4 TKAEMIITAGLS--SQFPVHDMPEIAFAGKSNVGKSSLLNAMLNRKALARTSSQPGKTQT 61 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NF+ +D VD+PGYGYA+ K + + WG LI YL +R L+ + LL Sbjct: 62 INFYNVQD---------TYMFVDLPGYGYAKVSKTDRERWGKLIEGYLEKREQLKKIILL 112 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID RH V D+ ++ ++ +V TK+DK+ + Q+ L +IR PE Sbjct: 113 IDIRHEVGNNDKMMYDWIKHYHNEVIVVATKMDKIKRSQVQKHLS----MIRKGLNLMPE 168 Query: 188 --VIPTSSVKRKGIEVLRKAILE 208 ++ SS ++G E L K I E Sbjct: 169 DKLVGFSSETKQGKEELWKIIEE 191 >gi|257869244|ref|ZP_05648897.1| GTP-binding protein [Enterococcus gallinarum EG2] gi|257803408|gb|EEV32230.1| GTP-binding protein [Enterococcus gallinarum EG2] Length = 195 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/138 (48%), Positives = 85/138 (61%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ ++N L Sbjct: 19 PDTHLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQTLNFYL------IENTL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ER LR V L+D RH Q D ++ F Sbjct: 72 --HFVDVPGYGYAKVSKTERAKWGKMIETYLAERQQLRAVVSLVDLRHAPSQEDIQMYQF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TK DK+ Sbjct: 130 LKYYEIPVIVVATKADKI 147 >gi|157803283|ref|YP_001491832.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia canadensis str. McKiel] gi|166225975|sp|A8EXG4|ENGB_RICCK RecName: Full=Probable GTP-binding protein EngB gi|157784546|gb|ABV73047.1| GTP-binding protein [Rickettsia canadensis str. McKiel] Length = 219 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT +NFF Sbjct: 26 FVAGAMNINQIPNFLLPEIAFIGKSNVGKSSLINTICNNKNLAKVSNIPGRTGQINFFNL 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + W LI YL + LR V LLID R G Sbjct: 86 AD---------KLIIVDLPGYGFANVPISVKEQWEVLISYYLRNSNNLRLVNLLIDSRRG 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+ V L K S+QI+ TK DK++ T E +L + + + V+ SS Sbjct: 137 IKENDKKVAELLLKNKRSFQIIFTKFDKVTD-CKNLTDEAQNFLTTLHYSCN--VMYVSS 193 Query: 194 VKRKGIEVLRKAILETI 210 ++G L+ ++ + I Sbjct: 194 RSKEGARELKASLAKCI 210 >gi|332361328|gb|EGJ39132.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1056] Length = 195 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/189 (41%), Positives = 101/189 (53%), Gaps = 17/189 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL---SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L + +V TK DK+ + ++K RN + I SSV + G++ Sbjct: 132 LKYYDIPVILVATKADKIPRGKWNKHESAIKKKLDFDRN-----DDFILFSSVTKDGLDA 186 Query: 202 LRKAILETI 210 AIL I Sbjct: 187 AWDAILSKI 195 >gi|291550778|emb|CBL27040.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus torques L2-14] Length = 206 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 109/188 (57%), Gaps = 15/188 (7%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 +LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ + Sbjct: 17 VLPENDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYTINE------- 69 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 M LVD+PGYGYA+ ++ WG LI RYL L+ V+LLID RH D+ ++ Sbjct: 70 --EMYLVDLPGYGYAKVSEQEKIQWGKLIERYLHTSKQLKAVFLLIDIRHDPSANDKMMY 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++ + I+ TK+DK+ + Q+ ++ K ++ P +VIP SS ++G Sbjct: 128 QWILDQGYQPIIIATKLDKIKRSQVQKHIKMLKTGLQLVPGT--KVIPFSSQTKQG---- 181 Query: 203 RKAILETI 210 R I E I Sbjct: 182 RDEIWELI 189 >gi|331086217|ref|ZP_08335299.1| GTP-binding protein engB [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406376|gb|EGG85890.1| GTP-binding protein engB [Lachnospiraceae bacterium 9_1_43BFAA] Length = 205 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/175 (41%), Positives = 104/175 (59%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ N Sbjct: 18 LPENDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 M LVD+PGYGYA+ +K WG LI +YL LR V+LLID RH D+ ++ Sbjct: 69 EEMYLVDLPGYGYAKVSEKEKIQWGKLIEKYLHTSKQLRAVFLLIDIRHEPSANDKMMYQ 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ + + I+ TK+DK+ + Q+ ++ K ++ P VIP SS ++G Sbjct: 129 WIVDQGYNPIIIATKLDKIKRSQVQKHVKMIKEGLQLVPGTT--VIPFSSETKQG 181 >gi|325662425|ref|ZP_08151031.1| GTP-binding protein engB [Lachnospiraceae bacterium 4_1_37FAA] gi|325471259|gb|EGC74483.1| GTP-binding protein engB [Lachnospiraceae bacterium 4_1_37FAA] Length = 205 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/175 (41%), Positives = 104/175 (59%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ N Sbjct: 18 LPENDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 M LVD+PGYGYA+ +K WG LI +YL LR V+LLID RH D+ ++ Sbjct: 69 EEMYLVDLPGYGYAKVSEKEKIQWGKLIEKYLHTSKQLRAVFLLIDIRHEPSANDKMMYQ 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ + + I+ TK+DK+ + Q+ ++ K ++ P VIP SS ++G Sbjct: 129 WIVDQGYNPIIIATKLDKIKRSQVQKHVKMIKEGLQLVPGTT--VIPFSSETKQG 181 >gi|332360698|gb|EGJ38507.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK49] Length = 195 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 78/188 (41%), Positives = 99/188 (52%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K + + I SSV + G++ Sbjct: 132 LKYYDIPVVLVATKADKIPRGKWNKHESAIKKKLDF----DKNDDFILFSSVTKDGLDAA 187 Query: 203 RKAILETI 210 AI I Sbjct: 188 WDAIFSKI 195 >gi|295113199|emb|CBL31836.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Enterococcus sp. 7L76] Length = 193 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/138 (48%), Positives = 86/138 (62%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNF++ +D Sbjct: 19 PESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTLNFYLIED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ K WG +I Y+++R LR V LID RH Q D ++ F Sbjct: 70 ALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPPTQDDIQMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + IV TK DK+ Sbjct: 130 LKYYDLPVIIVATKADKI 147 >gi|331649708|ref|ZP_08350788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli M605] gi|331041341|gb|EGI13491.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli M605] Length = 215 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 16 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 76 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 127 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 186 LKKQGVDKLRQKL 198 >gi|29376444|ref|NP_815598.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis V583] gi|227519262|ref|ZP_03949311.1| GTPase [Enterococcus faecalis TX0104] gi|227555531|ref|ZP_03985578.1| GTPase [Enterococcus faecalis HH22] gi|229545497|ref|ZP_04434222.1| GTPase [Enterococcus faecalis TX1322] gi|229549743|ref|ZP_04438468.1| GTPase [Enterococcus faecalis ATCC 29200] gi|255972439|ref|ZP_05423025.1| GTP-binding protein [Enterococcus faecalis T1] gi|255975539|ref|ZP_05426125.1| GTP-binding protein [Enterococcus faecalis T2] gi|256762853|ref|ZP_05503433.1| GTP-binding protein [Enterococcus faecalis T3] gi|256853437|ref|ZP_05558807.1| GTPase EngB [Enterococcus faecalis T8] gi|256959235|ref|ZP_05563406.1| GTP-binding protein [Enterococcus faecalis DS5] gi|256961588|ref|ZP_05565759.1| GTP-binding protein [Enterococcus faecalis Merz96] gi|256964804|ref|ZP_05568975.1| GTP-binding protein [Enterococcus faecalis HIP11704] gi|257079303|ref|ZP_05573664.1| GTP-binding protein [Enterococcus faecalis JH1] gi|257082258|ref|ZP_05576619.1| GTP-binding protein [Enterococcus faecalis E1Sol] gi|257084875|ref|ZP_05579236.1| GTP-binding protein [Enterococcus faecalis Fly1] gi|257087128|ref|ZP_05581489.1| GTP-binding protein [Enterococcus faecalis D6] gi|257416358|ref|ZP_05593352.1| GTP-binding protein [Enterococcus faecalis AR01/DG] gi|257419606|ref|ZP_05596600.1| GTP-binding protein [Enterococcus faecalis T11] gi|257422288|ref|ZP_05599278.1| GTPase engB [Enterococcus faecalis X98] gi|293382410|ref|ZP_06628347.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis R712] gi|293388259|ref|ZP_06632775.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis S613] gi|294779795|ref|ZP_06745182.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis PC1.1] gi|300861039|ref|ZP_07107126.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TUSoD Ef11] gi|307268263|ref|ZP_07549647.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX4248] gi|307272886|ref|ZP_07554133.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0855] gi|307275639|ref|ZP_07556780.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX2134] gi|307280531|ref|ZP_07561580.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0860] gi|307287932|ref|ZP_07567965.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0109] gi|307295962|ref|ZP_07575794.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0411] gi|312900931|ref|ZP_07760225.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0470] gi|312902701|ref|ZP_07761905.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0635] gi|312908363|ref|ZP_07767327.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis DAPTO 512] gi|312910564|ref|ZP_07769406.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis DAPTO 516] gi|312950950|ref|ZP_07769860.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0102] gi|81838891|sp|Q833M8|ENGB_ENTFA RecName: Full=Probable GTP-binding protein EngB gi|29343908|gb|AAO81668.1| GTP-binding protein [Enterococcus faecalis V583] gi|227073274|gb|EEI11237.1| GTPase [Enterococcus faecalis TX0104] gi|227175336|gb|EEI56308.1| GTPase [Enterococcus faecalis HH22] gi|229305012|gb|EEN71008.1| GTPase [Enterococcus faecalis ATCC 29200] gi|229309413|gb|EEN75400.1| GTPase [Enterococcus faecalis TX1322] gi|255963457|gb|EET95933.1| GTP-binding protein [Enterococcus faecalis T1] gi|255968411|gb|EET99033.1| GTP-binding protein [Enterococcus faecalis T2] gi|256684104|gb|EEU23799.1| GTP-binding protein [Enterococcus faecalis T3] gi|256711896|gb|EEU26934.1| GTPase EngB [Enterococcus faecalis T8] gi|256949731|gb|EEU66363.1| GTP-binding protein [Enterococcus faecalis DS5] gi|256952084|gb|EEU68716.1| GTP-binding protein [Enterococcus faecalis Merz96] gi|256955300|gb|EEU71932.1| GTP-binding protein [Enterococcus faecalis HIP11704] gi|256987333|gb|EEU74635.1| GTP-binding protein [Enterococcus faecalis JH1] gi|256990288|gb|EEU77590.1| GTP-binding protein [Enterococcus faecalis E1Sol] gi|256992905|gb|EEU80207.1| GTP-binding protein [Enterococcus faecalis Fly1] gi|256995158|gb|EEU82460.1| GTP-binding protein [Enterococcus faecalis D6] gi|257158186|gb|EEU88146.1| GTP-binding protein [Enterococcus faecalis ARO1/DG] gi|257161434|gb|EEU91394.1| GTP-binding protein [Enterococcus faecalis T11] gi|257164112|gb|EEU94072.1| GTPase engB [Enterococcus faecalis X98] gi|291080186|gb|EFE17550.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis R712] gi|291082341|gb|EFE19304.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis S613] gi|294453169|gb|EFG21584.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis PC1.1] gi|300850078|gb|EFK77828.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TUSoD Ef11] gi|306496293|gb|EFM65872.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0411] gi|306501077|gb|EFM70384.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0109] gi|306504079|gb|EFM73295.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0860] gi|306507744|gb|EFM76873.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX2134] gi|306510500|gb|EFM79523.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0855] gi|306515423|gb|EFM83954.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX4248] gi|310625777|gb|EFQ09060.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis DAPTO 512] gi|310631099|gb|EFQ14382.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0102] gi|310633755|gb|EFQ17038.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0635] gi|311289112|gb|EFQ67668.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis DAPTO 516] gi|311292030|gb|EFQ70586.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0470] gi|315025927|gb|EFT37859.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX2137] gi|315028965|gb|EFT40897.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX4000] gi|315033239|gb|EFT45171.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0017] gi|315036724|gb|EFT48656.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0027] gi|315143499|gb|EFT87515.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX2141] gi|315147582|gb|EFT91598.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX4244] gi|315149320|gb|EFT93336.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0012] gi|315152207|gb|EFT96223.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0031] gi|315157012|gb|EFU01029.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0043] gi|315159834|gb|EFU03851.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0312] gi|315161526|gb|EFU05543.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0645] gi|315163616|gb|EFU07633.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX1302] gi|315167355|gb|EFU11372.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX1341] gi|315169562|gb|EFU13579.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX1342] gi|315174261|gb|EFU18278.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX1346] gi|315574491|gb|EFU86682.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0309B] gi|315576776|gb|EFU88967.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0630] gi|315581847|gb|EFU94038.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0309A] gi|323481058|gb|ADX80497.1| GTPase, EngB subfamily [Enterococcus faecalis 62] gi|327535433|gb|AEA94267.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis OG1RF] gi|329572879|gb|EGG54504.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX1467] Length = 193 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/138 (48%), Positives = 86/138 (62%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNF++ +D Sbjct: 19 PESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTLNFYLIED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ K WG +I Y+++R LR V LID RH Q D ++ F Sbjct: 70 ALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPPTQDDIQMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + IV TK DK+ Sbjct: 130 LKYYDLPVIIVATKADKI 147 >gi|256619397|ref|ZP_05476243.1| GTP-binding protein [Enterococcus faecalis ATCC 4200] gi|256598924|gb|EEU18100.1| GTP-binding protein [Enterococcus faecalis ATCC 4200] Length = 193 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/138 (48%), Positives = 86/138 (62%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNF++ +D Sbjct: 19 PESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTLNFYLIED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ K WG +I Y+++R LR V LID RH Q D ++ F Sbjct: 70 ALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPPTQDDIQMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + IV TK DK+ Sbjct: 130 LKYYDLPVIIVATKADKI 147 >gi|157825273|ref|YP_001492993.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia akari str. Hartford] gi|166225973|sp|A8GM60|ENGB_RICAH RecName: Full=Probable GTP-binding protein EngB gi|157799231|gb|ABV74485.1| GTPase EngB [Rickettsia akari str. Hartford] Length = 212 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/197 (38%), Positives = 101/197 (51%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ +NFF Sbjct: 26 FVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFNL 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + W LI YL LR V LLID R G Sbjct: 86 AD---------KLIIVDLPGYGFAHVPISVKEQWEVLISYYLRNSHNLRLVNLLIDSRRG 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ DQ V L +QI+ TK DK+ + NY V+ SS Sbjct: 137 IKENDQKVAELLLANKREFQIIFTKSDKVIDCKNLNNEVQNFLATLNYSC---NVMYVSS 193 Query: 194 VKRKGIEVLRKAILETI 210 ++G L+ ++ + I Sbjct: 194 RSKEGARALKASLAKCI 210 >gi|259046800|ref|ZP_05737201.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella adiacens ATCC 49175] gi|259036568|gb|EEW37823.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella adiacens ATCC 49175] Length = 199 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/138 (47%), Positives = 86/138 (62%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA SGRSNVGKSS IN L+ RK+LARTS+ PG+TQ LNF+ + Sbjct: 19 PAGDLPEIALSGRSNVGKSSFINKLIQRKSLARTSSKPGKTQTLNFYHINEL-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ KK + WG +I Y++ R +LR V +L+D RH Q D + F Sbjct: 71 -FYFVDVPGYGYAKVSKKEREKWGKMIEEYITTRQSLRLVLILVDFRHEPSQEDVQMREF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L+ + Y+IV+TK DK+ Sbjct: 130 LEYYNIPYRIVMTKCDKI 147 >gi|311069312|ref|YP_003974235.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus atrophaeus 1942] gi|310869829|gb|ADP33304.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus atrophaeus 1942] Length = 195 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 15/189 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+A+ K ++WG +I Y++ R L+ V ++D RH D ++ F Sbjct: 70 DLHFVDVPGYGFAKVSKTEREAWGRMIETYITTREELKAVVQIVDLRHAPSADDVSMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVL 202 L + I+ TK DK+ + +K ++R P E+I SS +KG + Sbjct: 130 LKHYGIPVIIIATKADKI----PKGKWDKHAKVVRQTLNIEPEDELILFSSETKKGKDEA 185 Query: 203 RKAILETIN 211 AI + IN Sbjct: 186 WGAIKKMIN 194 >gi|258591281|emb|CBE67578.1| putative GTP-binding protein engB [NC10 bacterium 'Dutch sediment'] Length = 230 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 84/195 (43%), Positives = 107/195 (54%), Gaps = 15/195 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F+ V + LP+ EIA GRSNVGKSSLIN L+ R+ LAR S PGRTQ LNFF + Sbjct: 17 FVTSVSSLAQLPREPRAEIAVVGRSNVGKSSLINCLLRRRGLARVSGVPGRTQLLNFFLI 76 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +DF LVD+PGYGYA+ P +WG LI YL+ LR V +LID R Sbjct: 77 NRDFY----------LVDLPGYGYAKVPDSIRLAWGPLIEGYLASDRDLRVVIVLIDARQ 126 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL-EKTKYLIRNYPTAHPEVIPT 191 GV + D + LD ++++ VLTKIDKL T Q + + L P A +IP Sbjct: 127 GVTEKDLQMKGLLDNFSINWIPVLTKIDKLRRTARQAHIRDAVDALGLRDPRA---IIPF 183 Query: 192 SSVKRKGIEVLRKAI 206 S+ +G E L I Sbjct: 184 SAKSEEGRESLLAVI 198 >gi|190570517|ref|YP_001974875.1| GTP-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019273|ref|ZP_03335080.1| GTP-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238058990|sp|B3CL86|ENGB_WOLPP RecName: Full=Probable GTP-binding protein EngB gi|190356789|emb|CAQ54151.1| GTP-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995382|gb|EEB56023.1| GTP-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 197 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 103/167 (61%), Gaps = 8/167 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G + LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +NF+ Sbjct: 11 FIFGASDKKSLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFY-- 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ N+ +VD+PGYGY+ A K+ + LI YL R L+ V++LID + G Sbjct: 69 ----SMYND--KFRIVDLPGYGYSCASKEEAVQYLNLIEYYLIHRRNLKRVFVLIDSKVG 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 +K+ID+D +L +++ IVLTKIDK++ + LE T+ + N Sbjct: 123 LKEIDKDFVYWLICNNINFNIVLTKIDKVNQESLNAILENTQKWVNN 169 >gi|300813662|ref|ZP_07093984.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512204|gb|EFK39382.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 198 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 14/187 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P PE AF+GRSNVGKSS IN ++ RKNLARTS+ PG+T+ +NF+ V +D Sbjct: 19 PANNLPEFAFAGRSNVGKSSFINAMLGRKNLARTSSTPGKTRTINFYKVNED-------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGYA+ KK DSW +I YL R L LL+D RH Q+D ++ Sbjct: 71 --LRLVDLPGYGYAKVSKKEKDSWANIINEYLETRENLLETILLVDIRHDPTQLDLQMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L S ++ TK DK+S ++ ++ ++ ++ +IP SSV + ++ L Sbjct: 129 YLLASGFSGIVIATKKDKISKSSVKKNIDNIARKLK--APVKENIIPFSSVDKDEVDELW 186 Query: 204 KAILETI 210 ILE I Sbjct: 187 -YILEDI 192 >gi|300856720|ref|YP_003781704.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528] gi|300436835|gb|ADK16602.1| predicted GTP-binding protein [Clostridium ljungdahlii DSM 13528] Length = 196 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 107/188 (56%), Gaps = 13/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P E+AF GRSNVGKSSLIN L NRK L + S PG+T+ +NFF + DF Sbjct: 19 PVDNRVEVAFVGRSNVGKSSLINTLTNRKKLVKVSATPGKTRQINFFLINNDF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ KK +SWG +I +YL+ R L+ + L++DCRH D ++ Sbjct: 72 ---YLVDLPGYGYAKVSKKEKESWGNIIEKYLNARQQLKKIVLILDCRHKPTADDITMYK 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ IV TKIDK+S + L+ + ++ + E++ S++ ++G E + Sbjct: 129 WIKHYNYDIAIVATKIDKVSKNQLSKNLKVIRDTLK--MSGEDEILTFSALNKQGKEKIL 186 Query: 204 KAILETIN 211 + + TIN Sbjct: 187 EVLESTIN 194 >gi|330908183|gb|EGH36702.1| GTP-binding protein EngB [Escherichia coli AA86] Length = 210 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|71903337|ref|YP_280140.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS6180] gi|119369273|sp|Q48U21|ENGB_STRPM RecName: Full=Probable GTP-binding protein EngB gi|71802432|gb|AAX71785.1| GTP-binding protein [Streptococcus pyogenes MGAS6180] Length = 199 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 79/188 (42%), Positives = 101/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA +GRSNVGKSS IN ++ RKNLARTS+ PG+TQ LNFF D Sbjct: 25 PKDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH + D ++ F Sbjct: 76 KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDF 135 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K N T I SSV+R GI+ Sbjct: 136 LKYYDIPVIVVATKADKIPRGKWNKHESVVKKALNFDNSDT----FIVFSSVERIGIDDS 191 Query: 203 RKAILETI 210 AILE + Sbjct: 192 WDAILEQV 199 >gi|239947151|ref|ZP_04698904.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia endosymbiont of Ixodes scapularis] gi|239921427|gb|EER21451.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia endosymbiont of Ixodes scapularis] Length = 212 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 104/197 (52%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ GV I +P PEIAF G+SNVGKS LIN++ N KNLA+ SN PGRT+ +NFF Sbjct: 24 FVAGVMNINQIPNFSLPEIAFVGKSNVGKSRLINMICNNKNLAKVSNTPGRTRQINFFNL 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + W LI YL LR V LLID R G Sbjct: 84 AD---------KLIIVDLPGYGFANVPISVKEQWEVLISYYLRNSHNLRLVNLLIDSRRG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+ V L +QI+ TK DK++ + NY V+ SS Sbjct: 135 IKENDKKVAELLLANKREFQIIFTKSDKVTDHKNLNDEAQNFLATLNYSC---NVMYVSS 191 Query: 194 VKRKGIEVLRKAILETI 210 ++G+ L+ ++ + I Sbjct: 192 RSKEGVRELKASLAKCI 208 >gi|257090205|ref|ZP_05584566.1| GTP-binding protein [Enterococcus faecalis CH188] gi|256999017|gb|EEU85537.1| GTP-binding protein [Enterococcus faecalis CH188] Length = 193 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/138 (48%), Positives = 86/138 (62%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNF++ +D Sbjct: 19 PESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTLNFYLIED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ K WG +I Y+++R LR V LID RH Q D ++ F Sbjct: 70 ALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRVVVSLIDLRHPPTQDDIQMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + IV TK DK+ Sbjct: 130 LKYYDLPVIIVATKADKI 147 >gi|291518670|emb|CBK73891.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Butyrivibrio fibrisolvens 16/4] Length = 206 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 111/189 (58%), Gaps = 15/189 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LPK PE+AF+G+SNVGKSSLIN ++NRK LAR S PG+TQ +NF+ D Sbjct: 18 LPKNDLPEVAFAGKSNVGKSSLINAVMNRKALARVSAQPGKTQTINFYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + +VD+PGYG+A+A +K + WG +I YL+ +R V+LL+D RH D+ +F Sbjct: 70 -EIYVVDLPGYGFAKASEKERERWGKMIETYLNTSDMIRAVFLLVDIRHTPSANDKQMFE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEV 201 ++D ++ TK DK+ + L+K ++R A E ++P SS ++G++ Sbjct: 129 WMDYVGYDPIVIATKADKIK----RSQLDKQIKMVREGLGAGKETIIVPFSSQTKQGLDT 184 Query: 202 LRKAILETI 210 ++ + + I Sbjct: 185 IQDFLDQVI 193 >gi|34580908|ref|ZP_00142388.1| hypothetical GTP-binding protein [Rickettsia sibirica 246] gi|28262293|gb|EAA25797.1| hypothetical GTP-binding protein [Rickettsia sibirica 246] Length = 212 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 68/150 (45%), Positives = 87/150 (58%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ +NFF Sbjct: 24 FVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFNL 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + WG LI YL LR V LLID R G Sbjct: 84 AD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K+ D+ V L +QI+ TK DK++ Sbjct: 135 IKENDKKVADLLLANKREFQIIFTKSDKVT 164 >gi|325264759|ref|ZP_08131488.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. D5] gi|324030051|gb|EGB91337.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. D5] Length = 200 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 110/188 (58%), Gaps = 15/188 (7%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 +LP PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ N Sbjct: 17 VLPDNDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFY---------NI 67 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 M LVD+PGYGYA+ +K WG LI RYL+ + L+ ++LLID RH D+ ++ Sbjct: 68 NEEMYLVDLPGYGYAKVSEKEKVQWGKLIERYLNGSARLKAIFLLIDIRHEPSANDKMMY 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 S++ + I+ TK+DK+ + Q+ ++ + + P ++IP SS ++G Sbjct: 128 SWIVGQGFQPIIIATKMDKIKRSQIQKHVKMVREGLDLVPGT--KIIPFSSATKQG---- 181 Query: 203 RKAILETI 210 R I E I Sbjct: 182 RDEIWELI 189 >gi|328866113|gb|EGG14499.1| Putative GTP-binding protein [Dictyostelium fasciculatum] Length = 525 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 75/183 (40%), Positives = 101/183 (55%), Gaps = 10/183 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E LLP++ PE+AF GRSNVGKSSLIN + R LA+TS+ PG TQ +N+F Sbjct: 289 EDSLLPESDTPEVAFIGRSNVGKSSLINAITLR-GLAKTSDKPGLTQSINWFELG----- 342 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + LVD+PGYG+A A ++ D+W L V YL+ R +L+ V++LID RHG K D+ Sbjct: 343 ----STLRLVDLPGYGFAFAKQEKSDTWNQLSVNYLTSRKSLKRVFVLIDSRHGFKDSDR 398 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + LDK QIVLTK D + I++Y ++ SS KGI Sbjct: 399 QLLDILDKNHTHTQIVLTKTDLSEQLDLAKRFTLVANEIKHYRHVQDPILMVSSKTYKGI 458 Query: 200 EVL 202 L Sbjct: 459 AEL 461 >gi|158521131|ref|YP_001529001.1| GTP-binding protein HSR1-related [Desulfococcus oleovorans Hxd3] gi|238686898|sp|A8ZXG6|ENGB_DESOH RecName: Full=Probable GTP-binding protein EngB gi|158509957|gb|ABW66924.1| GTP-binding protein HSR1-related [Desulfococcus oleovorans Hxd3] Length = 197 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 108/186 (58%), Gaps = 16/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIAF+GRSNVGKSS+IN+LVNRKNL +TS+ PG+T+ +NFF D + Sbjct: 19 PDTDLPEIAFAGRSNVGKSSMINLLVNRKNLVKTSSTPGKTRLINFF---DING------ 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ +K +WG ++ RYLS R TLR + LL+D R ++ + + + Sbjct: 70 QLMFVDLPGYGYAKVSRKEQKTWGPMVERYLSSRKTLRGLMLLMDLRREPREDEFLMMQW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + +++VLTK DK T A + + R E+I S++++ G R Sbjct: 130 CAHYDIPWKMVLTKADKFKKTAAD---RRRHEIARAVGIGADEMILFSTLQKMG----RD 182 Query: 205 AILETI 210 LETI Sbjct: 183 PALETI 188 >gi|51246489|ref|YP_066373.1| hypothetical protein DP2637 [Desulfotalea psychrophila LSv54] gi|81641346|sp|Q6AJW0|ENGB_DESPS RecName: Full=Probable GTP-binding protein EngB gi|50877526|emb|CAG37366.1| conserved hypothetical GTP-binding protein [Desulfotalea psychrophila LSv54] Length = 193 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL V + LP+ G PE AF+GRSNVGKSSL+N L+ R + S PG+TQ LNFF Sbjct: 8 FLLSVHGLDQLPEDGLPEFAFAGRSNVGKSSLMNTLLRRSGFVKVSGRPGKTQGLNFFQA 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+AR K+ ++W LI Y+SER L+CV ++ID RH Sbjct: 68 AE---------DCMLVDLPGYGFARVSKEMQNNWQKLITSYISEREALKCVVVIIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 K +D+ + +L ++ V + TKIDKLS Sbjct: 119 PKALDRQLLDWLREQKVPVLPIYTKIDKLS 148 >gi|34540179|ref|NP_904658.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas gingivalis W83] gi|188995479|ref|YP_001929731.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas gingivalis ATCC 33277] gi|81572162|sp|Q7MX68|ENGB_PORGI RecName: Full=Probable GTP-binding protein EngB gi|238689267|sp|B2RL89|ENGB_PORG3 RecName: Full=Probable GTP-binding protein EngB gi|34396491|gb|AAQ65557.1| GTP-binding protein [Porphyromonas gingivalis W83] gi|188595159|dbj|BAG34134.1| putative GTP-binding protein [Porphyromonas gingivalis ATCC 33277] Length = 201 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 78/187 (41%), Positives = 104/187 (55%), Gaps = 10/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L +K LA TS PG+TQ +N F+ D Sbjct: 19 PDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQLINHFIIDD--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR N +S +I Y+ R L +++LIDCRH ++ID + + Sbjct: 70 SWYLVDLPGYGYARLGASNRESLRRIIETYILCREQLSSLFVLIDCRHEPQKIDLEFLQW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + + IV TK DKLS + +E E K + P V TSS K+ G E L Sbjct: 130 LGENGIPFSIVFTKADKLSFSRLKENTEAYKQKLLETWEELPPVFITSSEKKTGKEELLD 189 Query: 205 AILETIN 211 I ++IN Sbjct: 190 YI-DSIN 195 >gi|58617188|ref|YP_196387.1| GTPase EngB [Ehrlichia ruminantium str. Gardel] gi|75432753|sp|Q5FGZ3|ENGB_EHRRG RecName: Full=Probable GTP-binding protein EngB gi|58416800|emb|CAI27913.1| Probable GTP-binding protein engB [Ehrlichia ruminantium str. Gardel] Length = 200 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 110/197 (55%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I LP PE+A +GRSNVGKSSLIN + N + AR S+ PG T+ +NF++ Sbjct: 12 FIIGATSIKSLPDFSIPEVALAGRSNVGKSSLINAITNNRKNARISSKPGCTRQINFYLI 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N M LVD+PGYGY++A + V+S+ L+ YL R L V LLID + G Sbjct: 72 --------NKGLMVLVDLPGYGYSKADRATVNSYICLMEYYLLNRKNLSKVVLLIDAKVG 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K+ID D +L+ + YQ+VLTKID++ + + N+ +P +I SS Sbjct: 124 FKEIDLDFIRWLEVHQILYQLVLTKIDRVQSNVLDVIVSDVQNFNLNF-IIYP-IINVSS 181 Query: 194 VKRKGIEVLRKAILETI 210 ++GIE L I + I Sbjct: 182 KCKQGIEELIYEIAQCI 198 >gi|157151518|ref|YP_001450428.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus gordonii str. Challis substr. CH1] gi|189037195|sp|A8AXB8|ENGB_STRGC RecName: Full=Probable GTP-binding protein EngB gi|157076312|gb|ABV10995.1| GTP-binding protein [Streptococcus gordonii str. Challis substr. CH1] Length = 197 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 79/189 (41%), Positives = 101/189 (53%), Gaps = 15/189 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYAKVSKTERAKWGRMIEEYLTSRENLRAVVSLVDLRHEPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K N+ A I SSV + G++ Sbjct: 132 LKYYEIPVILVATKADKIPRGKWNKHESAIKKKL---NFDQADT-FILFSSVDKTGLDAS 187 Query: 203 RKAILETIN 211 AILE +N Sbjct: 188 WDAILEKVN 196 >gi|295107480|emb|CBL05023.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Gordonibacter pamelaeae 7-10-1-b] Length = 193 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 105/198 (53%), Gaps = 14/198 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F R L + PE+AFSGRSNVGKSSL+N L NRK LA+ S PG+T +NFF Sbjct: 8 FERSFGTSAQLTPSTAPEVAFSGRSNVGKSSLLNKLFNRKGLAKVSQTPGKTATINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + VD+PGYGYA+ K W LI Y ++ + V L+D RH Sbjct: 66 --------DGDGVTFVDLPGYGYAKVSKSEKARWSELIEGYFNQDRSFALVVALVDIRHE 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPTS 192 ++D+++ FL + + + + LTK DKLS Q+ +++ L R ++ TS Sbjct: 118 ASELDENMIRFLREADLPFVVALTKADKLSR---QQQMKQKAALKRQLALGDDASMVVTS 174 Query: 193 SVKRKGIEVLRKAILETI 210 S K G+E LRK I + + Sbjct: 175 SAKGDGMEELRKIIRDAV 192 >gi|16079871|ref|NP_390697.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis subsp. subtilis str. 168] gi|221310759|ref|ZP_03592606.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. 168] gi|221315084|ref|ZP_03596889.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320003|ref|ZP_03601297.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. JH642] gi|221324285|ref|ZP_03605579.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SMY] gi|321312351|ref|YP_004204638.1| GTP-binding protein YsxC [Bacillus subtilis BSn5] gi|586754|sp|P38424|ENGB_BACSU RecName: Full=Probable GTP-binding protein EngB gi|49259156|pdb|1SUL|A Chain A, Crystal Structure Of The Apo-Ysxc gi|49259157|pdb|1SUL|B Chain B, Crystal Structure Of The Apo-Ysxc gi|49259162|pdb|1SVI|A Chain A, Crystal Structure Of The Gtp-Binding Protein Ysxc Complexed With Gdp gi|49259165|pdb|1SVW|A Chain A, Crystal Structure Of Ysxc Complexed With Gmppnp gi|49259166|pdb|1SVW|B Chain B, Crystal Structure Of Ysxc Complexed With Gmppnp gi|496558|emb|CAA53985.1| unnamed protein product [Bacillus subtilis subsp. subtilis str. 168] gi|1770079|emb|CAA99541.1| hypothetical protein [Bacillus subtilis] gi|2635284|emb|CAB14779.1| GTPase involved in ribosome 50S subunit assembly [Bacillus subtilis subsp. subtilis str. 168] gi|291485234|dbj|BAI86309.1| GTPase EngB [Bacillus subtilis subsp. natto BEST195] gi|320018625|gb|ADV93611.1| GTP-binding protein YsxC [Bacillus subtilis BSn5] Length = 195 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 15/189 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+A+ K ++WG +I Y++ R L+ V ++D RH D ++ F Sbjct: 70 ELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVL 202 L + ++ TK DK+ + +K ++R P E+I SS +KG + Sbjct: 130 LKYYGIPVIVIATKADKI----PKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEA 185 Query: 203 RKAILETIN 211 AI + IN Sbjct: 186 WGAIKKMIN 194 >gi|319939270|ref|ZP_08013633.1| GTPase [Streptococcus anginosus 1_2_62CV] gi|319811666|gb|EFW07942.1| GTPase [Streptococcus anginosus 1_2_62CV] Length = 195 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/188 (41%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDEIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRENLRAVVSLVDFRHEPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K K + + I SSV + G++ Sbjct: 132 LKYYEIPVIVVATKADKIPRGKWNKHESVIKKKLDF----DKNDDFIVFSSVDKDGLDAA 187 Query: 203 RKAILETI 210 AILE I Sbjct: 188 WDAILEKI 195 >gi|291087566|ref|ZP_06346804.2| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. M62/1] gi|291074656|gb|EFE12020.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. M62/1] Length = 218 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 110/188 (58%), Gaps = 15/188 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE AF+G+SNVGKSSLIN L+NRK+ ARTS PG+TQ +NF+ D Sbjct: 31 LPANTQPEFAFAGKSNVGKSSLINALMNRKSYARTSAQPGKTQTINFYHIND-------- 82 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A+ VD+PGYGYARA ++ WG +I YL + L+CV+LLID RH + D+ ++S Sbjct: 83 -ALYYVDLPGYGYARANEEVKAKWGKMIENYLHKSPMLKCVFLLIDIRHEPSENDRLMYS 141 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEV 201 ++ + I+ TK+DKL + + K ++R PE +IP S+ ++G E Sbjct: 142 WIQNQGYRPVIIATKLDKLK----RSQVPKHVKMVRTGLGMGPEDLLIPFSAETKQGREE 197 Query: 202 LRKAILET 209 + I +T Sbjct: 198 IWDFIEKT 205 >gi|218133239|ref|ZP_03462043.1| hypothetical protein BACPEC_01104 [Bacteroides pectinophilus ATCC 43243] gi|217992112|gb|EEC58116.1| hypothetical protein BACPEC_01104 [Bacteroides pectinophilus ATCC 43243] Length = 195 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 15/185 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P+ PE+AF+G+SNVGKSSLIN L+NRK+LARTS+ PG+TQ +NF+ D Sbjct: 18 MPQTTLPEVAFAGKSNVGKSSLINALMNRKSLARTSSQPGKTQTINFYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 M LVD+PGYGYA A ++ WG +I RYL + L+ V+LLID RH D+ ++ Sbjct: 70 -VMHLVDLPGYGYANASEEVKAKWGRMIERYLQKSQQLKQVFLLIDIRHAPSANDKLMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEV 201 ++ I+ TK+DKL + ++++ ++R E +IP S+ + G+E Sbjct: 129 WIVHNGYRPVIIATKLDKLKRSQVAKSVK----IVREGLNLEKEDILIPFSAQTKHGLEQ 184 Query: 202 LRKAI 206 + + I Sbjct: 185 IWETI 189 >gi|259503089|ref|ZP_05745991.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus antri DSM 16041] gi|259168955|gb|EEW53450.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus antri DSM 16041] Length = 196 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/186 (40%), Positives = 111/186 (59%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA GRSNVGKSSL N+L+NR+N A TS+ PG+TQ LNF+V +D Sbjct: 19 PKTNYPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYVVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + +G +I +YL++R LR LL+D RH D ++ + Sbjct: 70 QLYFVDVPGYGYAKVSKKERERFGQMIEQYLTQRDQLRGTILLVDGRHAPTADDVSMYQW 129 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TKIDK+ + QE+L K + P+A+ ++I S+VK+ G + + Sbjct: 130 LQYYHIPTLVVATKIDKVKGNAWNRQESLIKKTLGL---PSAN-QLILFSAVKKTGKDAV 185 Query: 203 RKAILE 208 + I E Sbjct: 186 WQWIDE 191 >gi|57239177|ref|YP_180313.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia ruminantium str. Welgevonden] gi|58579135|ref|YP_197347.1| GTPase EngB [Ehrlichia ruminantium str. Welgevonden] gi|81557312|sp|Q5HB81|ENGB_EHRRW RecName: Full=Probable GTP-binding protein EngB gi|57161256|emb|CAH58177.1| putative GTP binding protein EngB [Ehrlichia ruminantium str. Welgevonden] gi|58417761|emb|CAI26965.1| Probable GTP-binding protein engB [Ehrlichia ruminantium str. Welgevonden] Length = 200 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 110/197 (55%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I LP PE+A +GRSNVGKSSLIN + N + AR S+ PG T+ +NF++ Sbjct: 12 FIIGATSIKSLPDFSIPEVALAGRSNVGKSSLINAITNNRKNARISSKPGCTRQINFYLI 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N M LVD+PGYGY++A + V+S+ L+ YL R L V LLID + G Sbjct: 72 --------NKGLMVLVDLPGYGYSKADRATVNSYICLMEYYLLNRKNLSKVVLLIDAKVG 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K+ID D +L+ + YQ+VLTKID++ + + N+ +P +I SS Sbjct: 124 FKEIDLDFIRWLEVHQILYQLVLTKIDRVQSNVLDVIVSDIQNFNLNF-IIYP-IINVSS 181 Query: 194 VKRKGIEVLRKAILETI 210 ++GIE L I + I Sbjct: 182 KCKQGIEELIYEIAQCI 198 >gi|50914055|ref|YP_060027.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS10394] gi|94994180|ref|YP_602278.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS10750] gi|139473949|ref|YP_001128665.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes str. Manfredo] gi|73919335|sp|Q5XCL9|ENGB_STRP6 RecName: Full=Probable GTP-binding protein EngB gi|119369272|sp|Q1J740|ENGB_STRPF RecName: Full=Probable GTP-binding protein EngB gi|166225987|sp|A2RF16|ENGB_STRPG RecName: Full=Probable GTP-binding protein EngB gi|50903129|gb|AAT86844.1| YihA [Streptococcus pyogenes MGAS10394] gi|94547688|gb|ABF37734.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS10750] gi|134272196|emb|CAM30442.1| putative GTP-binding protein [Streptococcus pyogenes str. Manfredo] Length = 199 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 78/186 (41%), Positives = 103/186 (55%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ PG+TQ LNFF N+ N L Sbjct: 25 PQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFF------NIDNKL- 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ R LR V L+D RH + D ++ F Sbjct: 78 --RFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDF 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V TK DK+ P E N+ + ++ SSV+R GI+ Sbjct: 136 LKYYDIPVIVVATKADKI-PRGKWNKHESVVKKALNFDKSDTFIV-FSSVERIGIDDSWD 193 Query: 205 AILETI 210 AILE + Sbjct: 194 AILEQV 199 >gi|312143238|ref|YP_003994684.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium sp. 'sapolanicus'] gi|311903889|gb|ADQ14330.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium sp. 'sapolanicus'] Length = 200 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 69/150 (46%), Positives = 88/150 (58%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + V + P+ PE+AFSGRSNVGKSSLIN + RK LARTSN PGRTQ LN+F Sbjct: 8 FYKSVYKYEECPRLQQPEVAFSGRSNVGKSSLINRITKRKKLARTSNTPGRTQSLNYFNI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYG+A PKK D W LI YL+ R L + +ID RH Sbjct: 68 DD---------KFYLVDLPGYGFANVPKKVKDDWAELIDSYLNYRENLIGIVQIIDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 + D+ + +L +S+ I TK+DK+S Sbjct: 119 PTKDDKMMVEWLKASGLSFLIAATKVDKIS 148 >gi|194334829|ref|YP_002016689.1| ribosome biogenesis GTP-binding protein YsxC [Prosthecochloris aestuarii DSM 271] gi|238693315|sp|B4S596|ENGB_PROA2 RecName: Full=Probable GTP-binding protein EngB gi|194312647|gb|ACF47042.1| small GTP-binding protein [Prosthecochloris aestuarii DSM 271] Length = 192 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 13/189 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + E+ LP + PEI F GRSNVGKS+L+N L RK LA+TS+ PG+TQ +N+F Sbjct: 8 FYKSCSELKGLPVSSLPEIVFVGRSNVGKSTLLNTLTGRKALAKTSSTPGKTQLINYFTI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYGYA+ K WG L+ Y+SER + V LLID RH Sbjct: 68 ND---------RLYFVDLPGYGYAKVAKGQRYEWGRLLGGYISEREEISLVVLLIDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + DQ + FL+ Y IVLTK DKL Q+ + + ++++ ++ S+ Sbjct: 119 DMESDQQMIEFLEYYQRPYGIVLTKYDKLK----QKEKSRVRKALKSFSLKTKFIVNYSA 174 Query: 194 VKRKGIEVL 202 + +G E L Sbjct: 175 LSGEGKESL 183 >gi|325570036|ref|ZP_08145961.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus casseliflavus ATCC 12755] gi|325156864|gb|EGC69035.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus casseliflavus ATCC 12755] Length = 200 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 77/183 (42%), Positives = 103/183 (56%), Gaps = 15/183 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ ++N L V Sbjct: 30 PEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQTLNFYL------IENTL---HFV 80 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K WG +I YL +R LR V L+D RH Q D ++ FL Sbjct: 81 DVPGYGYAKVSKTERAKWGKMIETYLEQREQLRAVVSLVDLRHAPSQEDVQMYEFLKYYE 140 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVLRKAIL 207 + +V TK DK+ + K + +I+ + P I SS+ ++G E KAI Sbjct: 141 IPVIVVATKADKI----PRGKWNKHESMIKKALSFDPADTFILFSSITKQGKEEAWKAIE 196 Query: 208 ETI 210 I Sbjct: 197 AAI 199 >gi|255536601|ref|YP_003096972.1| GTP-binding protein EngB [Flavobacteriaceae bacterium 3519-10] gi|255342797|gb|ACU08910.1| GTP-binding protein EngB [Flavobacteriaceae bacterium 3519-10] Length = 206 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 9/185 (4%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE AF GRSNVGKSSLIN ++N K+LA+TS PG+TQ +N FV + Sbjct: 19 PEPTMPEYAFIGRSNVGKSSLINAMLNFKDLAKTSQTPGKTQLINHFVINE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L D+PGYGYAR K + LI Y+ R L +++L+D RH ++ID + + Sbjct: 70 QWFLTDLPGYGYARVSKTKRKEFEKLITNYILNRKNLVNLFVLVDARHTPQKIDIEFIEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + +V + IV TK DKL P T +E K + PE+ TS+ KR G + + K Sbjct: 130 CGENSVPFSIVFTKADKLKPNTVISNVEHYKTELLKTWEDLPEIFVTSAEKRDGTDEVLK 189 Query: 205 AILET 209 I +T Sbjct: 190 LISKT 194 >gi|78221686|ref|YP_383433.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter metallireducens GS-15] gi|119369199|sp|Q39YG6|ENGB_GEOMG RecName: Full=Probable GTP-binding protein EngB gi|78192941|gb|ABB30708.1| GTP-binding protein [Geobacter metallireducens GS-15] Length = 204 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 70/169 (41%), Positives = 99/169 (58%), Gaps = 12/169 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF+GRSNVGKSSLIN+LVNRK L RTS+ PGRTQ +NFF ++ LV Sbjct: 24 PEVAFAGRSNVGKSSLINVLVNRKGLVRTSSTPGRTQLINFFRVNG---------SLMLV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ P WG ++ YLS R L CV L++D R + DQ + +L Sbjct: 75 DLPGYGFAKVPLAVKKEWGPMVETYLSTRPNLSCVVLIVDIRREPTEEDQLMLQWLRAYN 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 V+ +V+TK DK+S E ++ + R A E+ S++ ++G Sbjct: 135 VAVLVVVTKCDKVS---KNERAKQAAIITRTLGLARDEMAFFSALSKEG 180 >gi|160893845|ref|ZP_02074628.1| hypothetical protein CLOL250_01399 [Clostridium sp. L2-50] gi|156864497|gb|EDO57928.1| hypothetical protein CLOL250_01399 [Clostridium sp. L2-50] Length = 201 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 11/187 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PEIAF+G+SNVGKSSLIN L+NRK+LARTS+ PG+TQ +N++ N+ ++L Sbjct: 18 LPETEMPEIAFAGKSNVGKSSLINGLLNRKSLARTSSQPGKTQTINYY------NINHDL 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ + WG ++ RYL LR V+LLID RH + D ++ Sbjct: 72 ---YFVDLPGYGYAQVSVEIRAKWGKMVERYLHTSKQLRLVFLLIDIRHEPSENDCIMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ K I+ TK+DK+ + Q+ L+ + I+ P +IP S+ ++G E + Sbjct: 129 WIVKNGYEPVIIATKLDKIKRSQIQKNLKIIRQKIQ--PVEGTIIIPFSAQTKQGKEEIL 186 Query: 204 KAILETI 210 + I + I Sbjct: 187 QLIEDRI 193 >gi|227509448|ref|ZP_03939497.1| GTPase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512155|ref|ZP_03942204.1| GTPase [Lactobacillus buchneri ATCC 11577] gi|227524115|ref|ZP_03954164.1| GTPase [Lactobacillus hilgardii ATCC 8290] gi|227084549|gb|EEI19861.1| GTPase [Lactobacillus buchneri ATCC 11577] gi|227088746|gb|EEI24058.1| GTPase [Lactobacillus hilgardii ATCC 8290] gi|227191160|gb|EEI71227.1| GTPase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 195 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 73/176 (41%), Positives = 101/176 (57%), Gaps = 15/176 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIAF GRSNVGKSSL N+L+NRK ARTS+ PG+TQ LNF+ +D Sbjct: 19 PNTRFPEIAFVGRSNVGKSSLTNVLINRKGYARTSSQPGKTQTLNFYNIED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K N + WG +I +YL+ER LR V L+D RH D + + Sbjct: 70 KLFFVDVPGYGYAKTSKANREKWGKMIEKYLTEREQLRGVITLVDGRHAPTNDDVSMHEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKG 198 L + V TK+DK+ A+ K + LIR A+ ++I S++ ++G Sbjct: 130 LKYYGIEILTVATKMDKI----AKGKWNKQESLIRKTLNLDANEKLISFSALTKQG 181 >gi|257865955|ref|ZP_05645608.1| GTP-binding protein [Enterococcus casseliflavus EC30] gi|257872288|ref|ZP_05651941.1| GTP-binding protein [Enterococcus casseliflavus EC10] gi|257875582|ref|ZP_05655235.1| GTP-binding protein [Enterococcus casseliflavus EC20] gi|257799889|gb|EEV28941.1| GTP-binding protein [Enterococcus casseliflavus EC30] gi|257806452|gb|EEV35274.1| GTP-binding protein [Enterococcus casseliflavus EC10] gi|257809748|gb|EEV38568.1| GTP-binding protein [Enterococcus casseliflavus EC20] Length = 194 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 77/183 (42%), Positives = 103/183 (56%), Gaps = 15/183 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ ++N L V Sbjct: 24 PEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQTLNFYL------IENTL---HFV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K WG +I YL +R LR V L+D RH Q D ++ FL Sbjct: 75 DVPGYGYAKVSKTERAKWGKMIETYLEQREQLRAVVSLVDLRHAPSQEDIQMYEFLKYYE 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVLRKAIL 207 + +V TK DK+ + K + +I+ + P I SS+ ++G E KAI Sbjct: 135 IPVIVVATKADKIP----RGKWNKHESMIKKALSFDPADTFILFSSITKQGKEEAWKAIE 190 Query: 208 ETI 210 I Sbjct: 191 AAI 193 >gi|15603979|ref|NP_220494.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia prowazekii str. Madrid E] gi|6226324|sp|Q9ZE46|ENGB_RICPR RecName: Full=Probable GTP-binding protein EngB gi|3860670|emb|CAA14571.1| unknown [Rickettsia prowazekii] gi|292571693|gb|ADE29608.1| Hypothetical GTP-binding protein [Rickettsia prowazekii Rp22] Length = 214 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 105/204 (51%), Gaps = 22/204 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I +P PEI F G+SNVGKSS+IN + N K+LA+ SN PGRT+ +NFF Sbjct: 26 FVAGAIHINQIPDFSLPEIVFVGKSNVGKSSIINTICNNKSLAKVSNTPGRTRQINFF-- 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N + + +VD+PGYG+A P + W GLI YL L V LLID R G Sbjct: 84 -------NIVDKLIIVDLPGYGFANVPISVKEQWEGLITYYLRNSHNLMLVNLLIDSRRG 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT-----TAQETLEKTKYLIRNYPTAHPEV 188 +K+ D+ V L +QI+ TK DK++ AQ L YL V Sbjct: 137 IKENDKKVAELLLANKREFQIIFTKSDKVTDRENLNYEAQNFLATLNYLC--------NV 188 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I SS ++G+ L+ + + I + Sbjct: 189 IYVSSRNKEGMRELKASFAQCIKH 212 >gi|330799251|ref|XP_003287660.1| hypothetical protein DICPUDRAFT_151784 [Dictyostelium purpureum] gi|325082338|gb|EGC35823.1| hypothetical protein DICPUDRAFT_151784 [Dictyostelium purpureum] Length = 1674 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 10/177 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSLIN L R +A+TS+ PG TQ +N++ + LV Sbjct: 1460 PEVAFIGRSNVGKSSLINALTQR-GMAKTSDKPGFTQSINWYEIG---------STLYLV 1509 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A ++SW + YL+ R TL+CVY+L+D RHG+K D+ + LDKK Sbjct: 1510 DLPGYGFAFAKDVKLESWENITHEYLTTRKTLKCVYILVDARHGLKDSDRTLLLELDKKK 1569 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + IVLTK D + + ++ T ++NY + +I SS G+ L K I Sbjct: 1570 IKTHIVLTKADLVLQINLAKRIQITTDELKNYHHSILPIITVSSRSLAGVADLSKQI 1626 >gi|323527571|ref|YP_004229724.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1001] gi|323384573|gb|ADX56664.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1001] Length = 217 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 76/191 (39%), Positives = 101/191 (52%), Gaps = 9/191 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQH+N+ Sbjct: 10 FFTTVNHLRDLPATAQPEIAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINY--- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K + PA LVD+PGYGYA P W L+ YL RS LR + L++D R Sbjct: 67 --FSVGKADEPAAHLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMILMMDARRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 + +D+ + + +LTK DKL+ + L T+ + Y A + T Sbjct: 125 LTDLDRRMIEWFAPTGKPIHALLTKCDKLTRQESVNALRTTQKGLAEYRAAGYQGELTAQ 184 Query: 192 --SSVKRKGIE 200 S++KR GIE Sbjct: 185 LFSALKRVGIE 195 >gi|294155762|ref|YP_003560146.1| cell division GTP-binding protein EngB [Mycoplasma crocodyli MP145] gi|291600315|gb|ADE19811.1| cell division GTP-binding protein EngB [Mycoplasma crocodyli MP145] Length = 196 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 102/178 (57%), Gaps = 11/178 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 EI F GRSNVGKSSL+N +VN K+LAR S PGRTQ LN+F +N+L + Sbjct: 19 ASEICFWGRSNVGKSSLLNAIVNNKSLARVSKTPGRTQLLNYF--------ENDLSKNII 70 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYA+ K D +I YL S+L+ V LLID RHG+ ID+++ ++L Sbjct: 71 VDLPGYGYAKISKSQKDKMLKMIDEYLKNSSSLKAVLLLIDSRHGITNIDREIINYLVSI 130 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + ++ TKIDKL+ + ++ +K + + SS R+GI+ L K I Sbjct: 131 NLPIVLIYTKIDKLNQKEKSQLIKMSK---NEFSINKFNYLFVSSQTRQGIDELNKNI 185 >gi|167854567|ref|ZP_02477348.1| putative GTP-binding protein EngB [Haemophilus parasuis 29755] gi|167854322|gb|EDS25555.1| putative GTP-binding protein EngB [Haemophilus parasuis 29755] Length = 209 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPDIHHLPEDSGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R LR V +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQVKLQWQRSLGEYLQKRECLRGVVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + +T++ + I + +V S+ Sbjct: 124 LKDLDQQMIEWAVSAKLPVLLLLTKADKLSQSARSKTVKMVREAILPF-QGDVQVEAYSA 182 Query: 194 VKRKGIEVL 202 + R GI+ L Sbjct: 183 LNRIGIDKL 191 >gi|89901959|ref|YP_524430.1| ribosome biogenesis GTP-binding protein YsxC [Rhodoferax ferrireducens T118] gi|119369243|sp|Q21TK4|ENGB_RHOFD RecName: Full=Probable GTP-binding protein EngB gi|89346696|gb|ABD70899.1| GTP-binding protein, HSR1-related [Rhodoferax ferrireducens T118] Length = 207 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 74/191 (38%), Positives = 104/191 (54%), Gaps = 15/191 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 11 FLTTAPQLHFLPALDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINL--- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K + D+PGYGYA PK++ W ++ YL R L+ + L+ D RHG Sbjct: 68 --FSLGKQGVTDAVFADLPGYGYAAVPKQDKIRWQQVMANYLVTRENLKAIVLMCDPRHG 125 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVI 189 + ++D+ + + ++ + + +VLTK DKL+ T E+TK L I EV Sbjct: 126 LTELDEILLDIVRPRVEEGLKFLVVLTKADKLTRT------EQTKALSIMKLQAGGGEVR 179 Query: 190 PTSSVKRKGIE 200 S+ KR+GI+ Sbjct: 180 LFSATKRQGID 190 >gi|168183544|ref|ZP_02618208.1| GTP-binding protein [Clostridium botulinum Bf] gi|237796683|ref|YP_002864235.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum Ba4 str. 657] gi|182673313|gb|EDT85274.1| GTP-binding protein [Clostridium botulinum Bf] gi|229260786|gb|ACQ51819.1| GTP-binding protein [Clostridium botulinum Ba4 str. 657] Length = 194 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 111/188 (59%), Gaps = 15/188 (7%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P+ G PEIAF GRSNVGKS+LIN L NR+ L + S+ PG+T+ +NFF+ D Sbjct: 18 GQYPEDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLINFFLIND------ 71 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M VD+PGYGYA+ KK ++WG ++ +YL ER+ L+ + LL+D RH D ++ Sbjct: 72 ---NMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERNQLKKIVLLVDSRHKPTSDDINM 128 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGI 199 ++++ +V TK+DKL + + K K +IR+ + ++ SS+ ++G Sbjct: 129 YNWIKHYNYEVLVVGTKLDKLK----RNDINKNKKIIRDTLKMDKDDKILLISSLSKEGK 184 Query: 200 EVLRKAIL 207 E + + IL Sbjct: 185 EEVLEQIL 192 >gi|219872202|ref|YP_002476577.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus parasuis SH0165] gi|254783198|sp|B8F8H7|ENGB_HAEPS RecName: Full=Probable GTP-binding protein EngB gi|219692406|gb|ACL33629.1| GTPase EngB [Haemophilus parasuis SH0165] Length = 209 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 74/189 (39%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPDIRHLPEDSGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R LR V +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQVKLQWQRSLGEYLQKRECLRGVVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + +T++ + I + +V S+ Sbjct: 124 LKDLDQQMIEWAVSAELPVLLLLTKADKLSQSARSKTVKMVREAILPF-QGDVQVEAYSA 182 Query: 194 VKRKGIEVL 202 + R GI+ L Sbjct: 183 LNRIGIDKL 191 >gi|315221694|ref|ZP_07863610.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus anginosus F0211] gi|315189181|gb|EFU22880.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus anginosus F0211] Length = 195 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 78/188 (41%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF D Sbjct: 21 PQDEIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH D ++ F Sbjct: 72 KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRENLRAVVSLVDVRHEPSTDDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K K + + I SSV + G++ Sbjct: 132 LKYYEIPVIVVATKADKVPRGKWNKYESVIKKKLDF----DKNDDFIIFSSVNKDGLDAA 187 Query: 203 RKAILETI 210 AILE I Sbjct: 188 WDAILEKI 195 >gi|225568846|ref|ZP_03777871.1| hypothetical protein CLOHYLEM_04925 [Clostridium hylemonae DSM 15053] gi|225162345|gb|EEG74964.1| hypothetical protein CLOHYLEM_04925 [Clostridium hylemonae DSM 15053] Length = 200 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 72/176 (40%), Positives = 105/176 (59%), Gaps = 11/176 (6%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 +LP PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ N+ N Sbjct: 17 ILPDNDHPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFY------NINNE 70 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 M LVD+PGYGYA+ +K WG LI RYL L+ V+LLID RH D+ ++ Sbjct: 71 ---MYLVDLPGYGYAKVSEKEKMKWGQLIERYLHGSGQLKAVFLLIDIRHEPSANDRMMY 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ + I+ TK+DK+ + + ++ + + P +VIP SS+ ++G Sbjct: 128 DWIVDQGYEPIIIATKLDKIKRSQVDKHIKMLRTGLDLIPGT--KVIPFSSMTKQG 181 >gi|32035822|ref|ZP_00135658.1| COG0218: Predicted GTPase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207582|ref|YP_001052807.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus pleuropneumoniae L20] gi|303250228|ref|ZP_07336429.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251616|ref|ZP_07533522.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307260548|ref|ZP_07542241.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126096374|gb|ABN73202.1| putative GTP-binding protein EngB [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302650939|gb|EFL81094.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860927|gb|EFM92934.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306869777|gb|EFN01561.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 206 Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R LR V +L+D RH Sbjct: 71 E---------PNCKLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRECLRGVVILMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + +T++ + I + +V S+ Sbjct: 122 LKDLDQQMIEWAVSAQLPVLLLLTKADKLSQSARSKTVKMVREAILPF-QGDIQVEAYSA 180 Query: 194 VKRKGIEVL 202 + + GI+ L Sbjct: 181 LNKVGIDKL 189 >gi|258516483|ref|YP_003192705.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771] gi|257780188|gb|ACV64082.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771] Length = 201 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/151 (48%), Positives = 87/151 (57%), Gaps = 10/151 (6%) Query: 14 FLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ P I L P+ PEI F+GRSNVGKSSLIN LVNRKNLARTS PGRTQ LN+F+ Sbjct: 8 FVISSPGIKLCPEGQEYPEIGFAGRSNVGKSSLINKLVNRKNLARTSKTPGRTQLLNYFL 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 A +VD PGYGYA+ P+ WG +I YL R L V LL+D RH Sbjct: 68 INR---------AFYIVDFPGYGYAKVPQSVRAGWGKMIEGYLKNRKELSGVVLLLDIRH 118 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 D +F +L + +V TK DKLS Sbjct: 119 KPTAQDVQMFDWLQHYEIPTLLVATKADKLS 149 >gi|34499840|ref|NP_904055.1| ribosome biogenesis GTP-binding protein YsxC [Chromobacterium violaceum ATCC 12472] gi|81654051|sp|Q7NPV7|ENGB_CHRVO RecName: Full=Probable GTP-binding protein EngB gi|34105690|gb|AAQ62044.1| GTP-binding protein [Chromobacterium violaceum ATCC 12472] Length = 206 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/176 (39%), Positives = 99/176 (56%), Gaps = 11/176 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF GRSN GKSS IN L NR LA S PGRTQH+NFF D LVD Sbjct: 25 EVAFVGRSNAGKSSAINTLANRTRLAYVSKTPGRTQHINFFELGD---------ECFLVD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA P+ W L+ RYL R +L + L++D RH +K++D+ + F Sbjct: 76 LPGYGYAEVPEAVRAHWVELLGRYLQTRQSLIGLLLIMDARHPLKELDRRMLEFFRVAGR 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I+L+K DKLS + L + K + +YP+ ++ SS+K+ G++V+ + + Sbjct: 136 PVHILLSKADKLSRQEQNKVLAEVKRELADYPSVSVQMF--SSLKKTGVDVVEQVV 189 >gi|315641096|ref|ZP_07896175.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus italicus DSM 15952] gi|315483104|gb|EFU73621.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus italicus DSM 15952] Length = 222 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/190 (40%), Positives = 106/190 (55%), Gaps = 15/190 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ PEIA +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ +D Sbjct: 44 PESELPEIALAGRSNVGKSSFINTLIERKNLARTSSKPGKTQTLNFYNIED--------- 94 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL++RS L+ V L+D RH D ++ F Sbjct: 95 VLHFVDVPGYGYAKVSKTERAKWGKMIETYLTQRSQLKAVVSLVDFRHEPSVEDVQMYQF 154 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVL 202 L + +V TKIDK+ + K + +I+ T E I SSV + G ++ Sbjct: 155 LKYYDIPVIVVATKIDKI----PRGKWNKHESMIKKAMTFEKEDTFILFSSVTKDGKQLA 210 Query: 203 RKAILETINY 212 AI + I Y Sbjct: 211 WNAIEKAIGY 220 >gi|281180927|dbj|BAI57257.1| GTP-binding protein [Escherichia coli SE15] Length = 210 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGACKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|332084079|gb|EGI89284.1| putative GTP-binding protein [Shigella boydii 5216-82] Length = 210 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKCLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|189501178|ref|YP_001960648.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium phaeobacteroides BS1] gi|238692282|sp|B3EP28|ENGB_CHLPB RecName: Full=Probable GTP-binding protein EngB gi|189496619|gb|ACE05167.1| GTP-binding protein HSR1-related [Chlorobium phaeobacteroides BS1] Length = 192 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 103/189 (54%), Gaps = 13/189 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + V I LPK PEI F GRSNVGKS+L+N L RK LA+TS+ PG+TQ +N+FV Sbjct: 8 FYKSVSAIDHLPKEQLPEIVFVGRSNVGKSTLLNSLTARKGLAKTSSTPGKTQLINYFVI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + VD+PGYGYA+ K WG L+ Y+S R ++ V LLID RH Sbjct: 68 NE---------SCYFVDLPGYGYAKVDKGKKYEWGKLLSHYVSTRDSITLVVLLIDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + FL+ Y +VLTK DKL Q+ + +++Y ++ S+ Sbjct: 119 DMESDHLMAEFLEHCGRPYGVVLTKYDKLK----QQAKAAARLAVKSYSLKSKFIVNYSA 174 Query: 194 VKRKGIEVL 202 + +G E L Sbjct: 175 ISGQGKEEL 183 >gi|223041729|ref|ZP_03611923.1| putative GTP-binding protein EngB [Actinobacillus minor 202] gi|240950262|ref|ZP_04754541.1| GTPase EngB [Actinobacillus minor NM305] gi|223017467|gb|EEF15884.1| putative GTP-binding protein EngB [Actinobacillus minor 202] gi|240295239|gb|EER46040.1| GTPase EngB [Actinobacillus minor NM305] Length = 208 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 14 FLTSAPDIRHLPEDSGIEIAFAGRSNAGKSTSLNALTNQKNLARTSKTPGRTQLINLFEV 73 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R LR V +L+D RH Sbjct: 74 E---------PQCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + +T++ + I + +V S+ Sbjct: 125 LKDLDQQMIEWAVSAELPVLLLLTKADKLSQSARSKTVKMVREAILPF-QGDVQVEAYSA 183 Query: 194 VKRKGIEVL 202 + + GI+ L Sbjct: 184 LNKIGIDKL 192 >gi|165975551|ref|YP_001651144.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303251917|ref|ZP_07338088.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307244896|ref|ZP_07526994.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247073|ref|ZP_07529126.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249295|ref|ZP_07531290.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307258306|ref|ZP_07540048.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262677|ref|ZP_07544306.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165875652|gb|ABY68700.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649347|gb|EFL79532.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854218|gb|EFM86425.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856442|gb|EFM88592.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858694|gb|EFM90755.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306867645|gb|EFM99491.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306872005|gb|EFN03720.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 206 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R LR V +L+D RH Sbjct: 71 E---------PNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + +T++ + I + +V S+ Sbjct: 122 LKDLDQQMIEWAVSAQLPVLLLLTKADKLSQSARSKTVKMVREAILPF-QGDIQVEAYSA 180 Query: 194 VKRKGIEVL 202 + + GI+ L Sbjct: 181 LNKVGIDKL 189 >gi|293470176|ref|ZP_06664587.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B088] gi|291321386|gb|EFE60825.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B088] Length = 216 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 17 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 76 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 77 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 128 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 186 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 187 LKKQGVDKLRQKL 199 >gi|58584614|ref|YP_198187.1| GTPase EngB [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418930|gb|AAW70945.1| Predicted GTPase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 186 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/164 (42%), Positives = 98/164 (59%), Gaps = 8/164 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 G +I LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +NF+ Sbjct: 3 GASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFY----- 57 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 ++ N+ LVD+PGYG + A K + GL+ YL R LR V++LID + +K+ Sbjct: 58 -SMYND--KFRLVDLPGYGCSHASKDETIQYLGLVEYYLIHRRNLRRVFVLIDSKVRLKE 114 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 ID+D +L +++ +VLTKIDK+ +E T+ I N Sbjct: 115 IDKDFIYWLTYNNINFDVVLTKIDKVDRENLDAIIESTRKWINN 158 >gi|322515140|ref|ZP_08068143.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus ureae ATCC 25976] gi|322118854|gb|EFX91044.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus ureae ATCC 25976] Length = 206 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R LR V +L+D RH Sbjct: 71 E---------PNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + +T++ + I + +V S+ Sbjct: 122 LKDLDQQMIEWAVSTQLPVLLLLTKADKLSQSARSKTVKMVREAILPF-QGDIQVEAYSA 180 Query: 194 VKRKGIEVL 202 + + GI+ L Sbjct: 181 LNKIGIDKL 189 >gi|325104688|ref|YP_004274342.1| ribosome biogenesis GTP-binding protein YsxC [Pedobacter saltans DSM 12145] gi|324973536|gb|ADY52520.1| ribosome biogenesis GTP-binding protein YsxC [Pedobacter saltans DSM 12145] Length = 216 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/182 (39%), Positives = 106/182 (58%), Gaps = 11/182 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSN 78 +I LP PE AF GRSNVGKSSLIN+L + K LA+TS PG+TQ +N F + K++ Sbjct: 14 KISKLPPCVLPEYAFIGRSNVGKSSLINMLTDVKGLAKTSQKPGKTQLINHFLINKEW-- 71 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 LVD+PGYGYAR+ K N W I YL +R +L+CV++LID R ++ID Sbjct: 72 --------YLVDLPGYGYARSSKSNRLEWAKFIKNYLEKRESLQCVFVLIDSRLEPQKID 123 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + +L ++ + + ++ TK DK +Q+ + K + + P+++ TSS + G Sbjct: 124 IEFCCYLGERGIPFILIFTKADKNGVNKSQQNMSAFKKEMLKHFEEVPQMLLTSSETKFG 183 Query: 199 IE 200 E Sbjct: 184 KE 185 >gi|312885959|ref|ZP_07745587.1| ribosome biogenesis GTP-binding protein YsxC [Mucilaginibacter paludis DSM 18603] gi|311301496|gb|EFQ78537.1| ribosome biogenesis GTP-binding protein YsxC [Mucilaginibacter paludis DSM 18603] Length = 215 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 105/187 (56%), Gaps = 9/187 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ LP A PE AF GRSNVGKSSLIN+LV++K LA+TS PG+TQ +N F+ Sbjct: 8 FVCSNTQVSKLPPAVKPEYAFIGRSNVGKSSLINMLVDKKGLAKTSQTPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYAR K + W I YL +R +L+ V++LID R Sbjct: 68 ND---------NWYLVDLPGYGYARISKSKKEDWNKFIRTYLDKRESLQTVFVLIDSRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + ++L +K +S+ ++ TK DK S + + K + P + TS+ Sbjct: 119 PQKIDLEFCNWLGEKGLSFALIFTKADKQSRVKTDQNVSAFKKALLTTFEDIPTIFITSA 178 Query: 194 VKRKGIE 200 + G E Sbjct: 179 ELQTGRE 185 >gi|117626138|ref|YP_859461.1| GTPase EngB [Escherichia coli APEC O1] gi|227885401|ref|ZP_04003206.1| GTP-binding protein [Escherichia coli 83972] gi|300976574|ref|ZP_07173524.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 45-1] gi|300985860|ref|ZP_07177624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 200-1] gi|301046668|ref|ZP_07193797.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 185-1] gi|259645893|sp|A1AI47|ENGB_ECOK1 RecName: Full=Probable GTP-binding protein EngB gi|115515262|gb|ABJ03337.1| putative GTP-binding protein [Escherichia coli APEC O1] gi|227837659|gb|EEJ48125.1| GTP-binding protein [Escherichia coli 83972] gi|300301380|gb|EFJ57765.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 185-1] gi|300306499|gb|EFJ61019.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 200-1] gi|300410032|gb|EFJ93570.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 45-1] gi|307556007|gb|ADN48782.1| probable GTP-binding protein [Escherichia coli ABU 83972] gi|315289565|gb|EFU48958.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 110-3] gi|315292789|gb|EFU52141.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 153-1] gi|315300260|gb|EFU59496.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 16-3] gi|324006859|gb|EGB76078.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 57-2] gi|324012583|gb|EGB81802.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 60-1] Length = 215 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 16 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 76 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 127 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 186 LKKQGVDKLRQKL 198 >gi|307731224|ref|YP_003908448.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1003] gi|307585759|gb|ADN59157.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1003] Length = 217 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 103/197 (52%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQH+N+ Sbjct: 10 FFTTVNHLRDLPATAQPEIAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINY--- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K + PA LVD+PGYGYA P W L+ YL RS LR + L++D R Sbjct: 67 --FSVGKADEPAGHLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMILMMDARRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 + +D+ + + +LTK DKL+ + L T+ + Y A + T Sbjct: 125 LTDLDRRMIEWFAPTGKPIHALLTKCDKLTRQESVNALRTTQKGLAEYRAAGYQGELTAQ 184 Query: 192 --SSVKRKGIEVLRKAI 206 S++KR GIE + I Sbjct: 185 LFSALKRVGIEEAHELI 201 >gi|23099530|ref|NP_692996.1| GTPase EngB [Oceanobacillus iheyensis HTE831] gi|81846051|sp|Q8EPM2|ENGB_OCEIH RecName: Full=Probable GTP-binding protein EngB gi|22777760|dbj|BAC14031.1| GTP-binding protein (EngB family) [Oceanobacillus iheyensis HTE831] Length = 195 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 9/154 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF+ + Sbjct: 19 PEDQLPEIALAGRSNVGKSSFINRLINRKNLARTSSKPGKTQTLNFYRINE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + WG ++ Y R TLR V L+ D RH Q D ++ F Sbjct: 70 SFYFVDVPGYGYAKVSKKEREKWGRMMEEYFQTRDTLRAVVLVTDLRHDPTQDDIQMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + + I+ TK+DK++ Q+ + + K ++ Sbjct: 130 IKYFDLPVIIIGTKLDKITKNKRQKHINRAKQVL 163 >gi|295109359|emb|CBL23312.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus obeum A2-162] Length = 201 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/189 (40%), Positives = 105/189 (55%), Gaps = 19/189 (10%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P G PE+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ D Sbjct: 18 IPDTGLPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFYKIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGYAR + WG +I YL L+ V+LLID RH D+ ++ Sbjct: 70 -ELDLVDLPGYGYARVTPAEKEKWGKMIENYLHTSHNLKAVFLLIDIRHDPSANDRQMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK--YLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ I+ TK+DKL + Q+ L+ + +R T VIP S+ ++G Sbjct: 129 WILHNGYEPIIIATKLDKLKRSQVQKNLKAIREGLQLRKGTT----VIPYSAETKQG--- 181 Query: 202 LRKAILETI 210 R I E I Sbjct: 182 -RDEIWELI 189 >gi|325499167|gb|EGC97026.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia fergusonii ECD227] Length = 207 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 8 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 68 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 119 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 177 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 178 LKKQGVDKLRQKL 190 >gi|324111948|gb|EGC05928.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia fergusonii B253] Length = 210 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|301309826|ref|ZP_07215765.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 20_3] gi|300831400|gb|EFK62031.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 20_3] Length = 200 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 108/187 (57%), Gaps = 15/187 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE AF GRSNVGKSSLIN+L N+K LA TS PG+T +N F+ D Sbjct: 19 PEGNKPEYAFIGRSNVGKSSLINMLTNKKGLAMTSQTPGKTLLINHFLIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYG+A+ K+N + +I Y+ +R L +++L+DCRH ++ID + + Sbjct: 70 EWYLVDLPGYGFAQRGKENREQLKRIIENYILDREQLTNLFVLLDCRHEAQKIDLEFMEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLE-KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + V + I+ TKIDK+S +E L+ T L+ + P + +SS K++G R Sbjct: 130 LGESGVPFSIIFTKIDKISKGRLKENLKVYTDKLLETWEELPP-IFLSSSEKKEG----R 184 Query: 204 KAILETI 210 IL+ I Sbjct: 185 DEILDYI 191 >gi|290969195|ref|ZP_06560720.1| ribosome biogenesis GTP-binding protein YsxC [Megasphaera genomosp. type_1 str. 28L] gi|290780701|gb|EFD93304.1| ribosome biogenesis GTP-binding protein YsxC [Megasphaera genomosp. type_1 str. 28L] Length = 206 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 76/190 (40%), Positives = 107/190 (56%), Gaps = 10/190 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF----VPKDFSNLK 80 P G E+AF GRSNVGKSSLIN L N + LAR S +PG+TQ +N++ +D +++ Sbjct: 22 PTDGLAEVAFLGRSNVGKSSLINSLCNHRGLARVSGSPGKTQTINYYGVTLRQEDGEDVR 81 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + VD+PGYG+A+ KK D W I Y+ E + LR + LLID RH +D Sbjct: 82 RY--PLYFVDLPGYGFAKTGKKQRDMWSAFIHEYIRESTQLRLLCLLIDSRHPGLDLDLQ 139 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +L VS QIV TK DKL Q+ L + L +P ++ SS+KR+G Sbjct: 140 AYEWLLSAGVSVQIVATKSDKLRARERQQNL---RTLAELFPDGGRPLL-YSSLKRQGQT 195 Query: 201 VLRKAILETI 210 +L + I+ TI Sbjct: 196 LLLQQIIHTI 205 >gi|303278466|ref|XP_003058526.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459686|gb|EEH56981.1| predicted protein [Micromonas pusilla CCMP1545] Length = 523 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/162 (45%), Positives = 100/162 (61%), Gaps = 15/162 (9%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E L P PE+AF+GRSNVGKSSLIN + AR+S+ PG+TQ LNF+ D S Sbjct: 225 EDSLPPPDDVPEVAFAGRSNVGKSSLINA-ITLSAAARSSDVPGKTQSLNFY---DVSRR 280 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + +VDMPGYG+A A VD+W LI +YL+ R+ L+ VY++ID RHG+K D+ Sbjct: 281 ------LRIVDMPGYGFAFAAPDRVDAWNRLIDKYLTGRANLKRVYVVIDARHGLKAPDR 334 Query: 140 DVFSFLDK-KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 ++ +FL K VSYQ+VL K D + P L + +LIR Sbjct: 335 EMLAFLSKYGGVSYQVVLNKTDLVKPG----DLARRAFLIRE 372 >gi|119369192|sp|Q0TAJ6|ENGB_ECOL5 RecName: Full=Probable GTP-binding protein EngB Length = 210 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKTDKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|170769691|ref|ZP_02904144.1| putative GTP-binding protein EngB [Escherichia albertii TW07627] gi|170121499|gb|EDS90430.1| putative GTP-binding protein EngB [Escherichia albertii TW07627] Length = 210 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|19745954|ref|NP_607090.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS8232] gi|24418369|sp|Q8P1C8|ENGB_STRP8 RecName: Full=Probable GTP-binding protein EngB gi|19748113|gb|AAL97589.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes MGAS8232] Length = 199 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/186 (41%), Positives = 103/186 (55%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ PG+TQ LNFF N+ + L Sbjct: 25 PQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFF------NIDDKL- 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ R LR V L+D RH + D ++ F Sbjct: 78 --RFVDVPGYGYAKVSKSERAEWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDF 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V TK DK+ P E N+ + ++ SSV+R GI+ Sbjct: 136 LKYYDIPVIVVATKADKI-PRGKWNKHESVVKKALNFDKSDTFIV-FSSVERIGIDDSWD 193 Query: 205 AILETI 210 AILE + Sbjct: 194 AILEQV 199 >gi|89098931|ref|ZP_01171811.1| GTP-binding protein [Bacillus sp. NRRL B-14911] gi|89086335|gb|EAR65456.1| GTP-binding protein [Bacillus sp. NRRL B-14911] Length = 195 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 9/158 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ + Sbjct: 19 PEESLPEFALAGRSNVGKSSFINKMLNRKNLARTSSKPGKTQTLNFYLINEM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ KK ++WG +I Y + R L+ L++D RH + D ++ F Sbjct: 71 -MHFVDVPGYGYAKVSKKEREAWGRMIETYFTSREQLKAAVLIVDLRHPPTKDDIMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 L + I+ TK DK+ T Q+ + TK + P Sbjct: 130 LKHHGIRCIIIATKADKIPKTKRQKHFKITKETLELEP 167 >gi|322807541|emb|CBZ05116.1| GTP-binding protein EngB [Clostridium botulinum H04402 065] Length = 199 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 15/185 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE+AF GRSNVGKS+LIN L NR+ L + S+ PG+T+ +NFFV D Sbjct: 26 PEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLINFFVIND--------- 76 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ KK ++WG ++ +YL ER L+ + LL+D RH D +++++ Sbjct: 77 NMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTSDDINMYNW 136 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVL 202 + +V TK+DKL + + K K +IR+ + ++ SS+ ++G E + Sbjct: 137 IKHYNYEVLVVGTKLDKLK----RNDINKNKKIIRDTLKMDKDDKILLISSLSKEGKEEV 192 Query: 203 RKAIL 207 + IL Sbjct: 193 LEQIL 197 >gi|224826040|ref|ZP_03699143.1| GTP-binding protein HSR1-related [Lutiella nitroferrum 2002] gi|224601677|gb|EEG07857.1| GTP-binding protein HSR1-related [Lutiella nitroferrum 2002] Length = 207 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 72/181 (39%), Positives = 99/181 (54%), Gaps = 14/181 (7%) Query: 29 PP---EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 PP E+AF GRSN GKSS IN L NR LA S PGRTQH+NFF D + Sbjct: 20 PPTRAEVAFVGRSNAGKSSAINTLANRTRLAFVSKTPGRTQHINFF---DLGEER----- 71 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD+PGYGYA P+ W L+ RYL R L + +++D RH +K++D + F Sbjct: 72 -YLVDLPGYGYAEVPEAVRTHWVALLGRYLQTRQNLVGLIMIMDSRHPLKELDWKMLEFF 130 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+L+K DKLS Q+TL K + +YP ++ SS+K+ G E + + Sbjct: 131 RETGRPVHILLSKSDKLSRMEQQKTLASVKKALADYPAVSIQLF--SSLKKTGGETVEEV 188 Query: 206 I 206 + Sbjct: 189 V 189 >gi|145698334|ref|NP_418301.3| GTP-binding protein required for normal cell division [Escherichia coli str. K-12 substr. MG1655] gi|157156230|ref|YP_001465345.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli E24377A] gi|157163335|ref|YP_001460653.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli HS] gi|161486045|ref|NP_756667.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli CFT073] gi|161950010|ref|YP_405310.2| ribosome biogenesis GTP-binding protein YsxC [Shigella dysenteriae Sd197] gi|161986408|ref|YP_312789.2| ribosome biogenesis GTP-binding protein YsxC [Shigella sonnei Ss046] gi|162138322|ref|YP_543397.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli UTI89] gi|170022121|ref|YP_001727075.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli ATCC 8739] gi|170683684|ref|YP_001746193.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli SMS-3-5] gi|187732245|ref|YP_001882562.1| ribosome biogenesis GTP-binding protein YsxC [Shigella boydii CDC 3083-94] gi|188492392|ref|ZP_02999662.1| GTPase family protein [Escherichia coli 53638] gi|191169445|ref|ZP_03031182.1| putative GTP-binding protein EngB [Escherichia coli B7A] gi|191173902|ref|ZP_03035422.1| putative GTP-binding protein EngB [Escherichia coli F11] gi|193063965|ref|ZP_03045051.1| putative GTP-binding protein EngB [Escherichia coli E22] gi|193068077|ref|ZP_03049042.1| putative GTP-binding protein EngB [Escherichia coli E110019] gi|215489198|ref|YP_002331629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O127:H6 str. E2348/69] gi|237702894|ref|ZP_04533375.1| GTPase EngB [Escherichia sp. 3_2_53FAA] gi|238902932|ref|YP_002928728.1| GTP-binding protein [Escherichia coli BW2952] gi|253775500|ref|YP_003038331.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|256021502|ref|ZP_05435367.1| ribosome biogenesis GTP-binding protein YsxC [Shigella sp. D9] gi|256026102|ref|ZP_05439967.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia sp. 4_1_40B] gi|260846367|ref|YP_003224145.1| GTP-binding protein [Escherichia coli O103:H2 str. 12009] gi|260857737|ref|YP_003231628.1| GTP-binding protein [Escherichia coli O26:H11 str. 11368] gi|260870581|ref|YP_003236983.1| GTP-binding protein [Escherichia coli O111:H- str. 11128] gi|293407484|ref|ZP_06651403.1| GTP-binding protein engB [Escherichia coli FVEC1412] gi|293413299|ref|ZP_06655960.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B354] gi|293417325|ref|ZP_06659949.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B185] gi|297517721|ref|ZP_06936107.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli OP50] gi|298383227|ref|ZP_06992820.1| GTP-binding protein engB [Escherichia coli FVEC1302] gi|301027904|ref|ZP_07191196.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 196-1] gi|306813870|ref|ZP_07448046.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli NC101] gi|307140559|ref|ZP_07499915.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H736] gi|307314015|ref|ZP_07593629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli W] gi|309783772|ref|ZP_07678418.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|312969392|ref|ZP_07783594.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331660414|ref|ZP_08361348.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA206] gi|332282740|ref|ZP_08395153.1| GTPase EngB [Shigella sp. D9] gi|67462332|sp|P0A6P7|ENGB_ECOLI RecName: Full=Probable GTP-binding protein EngB gi|67462333|sp|P0A6P8|ENGB_ECOL6 RecName: Full=Probable GTP-binding protein EngB gi|119369193|sp|Q1R448|ENGB_ECOUT RecName: Full=Probable GTP-binding protein EngB gi|119369257|sp|Q32A36|ENGB_SHIDS RecName: Full=Probable GTP-binding protein EngB gi|119369259|sp|Q3YVA8|ENGB_SHISS RecName: Full=Probable GTP-binding protein EngB gi|166920110|sp|A7ZU66|ENGB_ECO24 RecName: Full=Probable GTP-binding protein EngB gi|166920111|sp|A8A6W6|ENGB_ECOHS RecName: Full=Probable GTP-binding protein EngB gi|189037177|sp|B1IW48|ENGB_ECOLC RecName: Full=Probable GTP-binding protein EngB gi|226741188|sp|B1LMP7|ENGB_ECOSM RecName: Full=Probable GTP-binding protein EngB gi|238691700|sp|B2TVL1|ENGB_SHIB3 RecName: Full=Probable GTP-binding protein EngB gi|254783196|sp|B7UNI7|ENGB_ECO27 RecName: Full=Probable GTP-binding protein EngB gi|259645892|sp|C5A033|ENGB_ECOBW RecName: Full=Probable GTP-binding protein EngB gi|33358154|pdb|1PUI|A Chain A, Structure Of Engb Gtpase gi|33358155|pdb|1PUI|B Chain B, Structure Of Engb Gtpase gi|145693205|gb|AAC76862.3| GTP-binding protein required for normal cell division [Escherichia coli str. K-12 substr. MG1655] gi|157069015|gb|ABV08270.1| putative GTP-binding protein EngB [Escherichia coli HS] gi|157078260|gb|ABV17968.1| putative GTP-binding protein EngB [Escherichia coli E24377A] gi|169757049|gb|ACA79748.1| GTP-binding protein HSR1-related [Escherichia coli ATCC 8739] gi|170521402|gb|ACB19580.1| putative GTP-binding protein EngB [Escherichia coli SMS-3-5] gi|187429237|gb|ACD08511.1| putative GTP-binding protein EngB [Shigella boydii CDC 3083-94] gi|188487591|gb|EDU62694.1| GTPase family protein [Escherichia coli 53638] gi|190900513|gb|EDV60325.1| putative GTP-binding protein EngB [Escherichia coli B7A] gi|190905860|gb|EDV65479.1| putative GTP-binding protein EngB [Escherichia coli F11] gi|192929430|gb|EDV83038.1| putative GTP-binding protein EngB [Escherichia coli E22] gi|192958697|gb|EDV89135.1| putative GTP-binding protein EngB [Escherichia coli E110019] gi|215267270|emb|CAS11719.1| GTP-binding protein [Escherichia coli O127:H6 str. E2348/69] gi|222035577|emb|CAP78322.1| GTP-binding protein engB [Escherichia coli LF82] gi|226902831|gb|EEH89090.1| GTPase EngB [Escherichia sp. 3_2_53FAA] gi|238861392|gb|ACR63390.1| GTP-binding protein [Escherichia coli BW2952] gi|253326544|gb|ACT31146.1| GTP-binding protein HSR1-related [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|257756386|dbj|BAI27888.1| GTP-binding protein [Escherichia coli O26:H11 str. 11368] gi|257761514|dbj|BAI33011.1| GTP-binding protein [Escherichia coli O103:H2 str. 12009] gi|257766937|dbj|BAI38432.1| GTP-binding protein [Escherichia coli O111:H- str. 11128] gi|260451300|gb|ACX41722.1| GTP-binding protein HSR1-related protein [Escherichia coli DH1] gi|284923966|emb|CBG37065.1| probable GTP-binding protein [Escherichia coli 042] gi|291425401|gb|EFE98440.1| GTP-binding protein engB [Escherichia coli FVEC1412] gi|291430845|gb|EFF03841.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B185] gi|291468047|gb|EFF10545.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B354] gi|294490765|gb|ADE89521.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli IHE3034] gi|298276261|gb|EFI17781.1| GTP-binding protein engB [Escherichia coli FVEC1302] gi|299878997|gb|EFI87208.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 196-1] gi|305852868|gb|EFM53315.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli NC101] gi|306906332|gb|EFN36848.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli W] gi|307628941|gb|ADN73245.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli UM146] gi|308928355|gb|EFP73816.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|312285939|gb|EFR13857.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312948434|gb|ADR29261.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O83:H1 str. NRG 857C] gi|315063150|gb|ADT77477.1| GTP-binding protein [Escherichia coli W] gi|315138433|dbj|BAJ45592.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli DH1] gi|320174863|gb|EFW49984.1| GTP-binding protein EngB [Shigella dysenteriae CDC 74-1112] gi|320182136|gb|EFW57039.1| GTP-binding protein EngB [Shigella boydii ATCC 9905] gi|320196912|gb|EFW71534.1| GTP-binding protein EngB [Escherichia coli WV_060327] gi|320198936|gb|EFW73534.1| GTP-binding protein EngB [Escherichia coli EC4100B] gi|323155159|gb|EFZ41346.1| hypothetical protein ECEPECA14_2976 [Escherichia coli EPECa14] gi|323189711|gb|EFZ74990.1| hypothetical protein ECRN5871_2081 [Escherichia coli RN587/1] gi|323380786|gb|ADX53054.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli KO11] gi|323934351|gb|EGB30764.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli E1520] gi|323939085|gb|EGB35301.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli E482] gi|323943760|gb|EGB39857.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H120] gi|323949359|gb|EGB45248.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H252] gi|323954360|gb|EGB50145.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H263] gi|323959368|gb|EGB55029.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H489] gi|323964212|gb|EGB59695.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli M863] gi|323969731|gb|EGB65014.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA007] gi|323974267|gb|EGB69396.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TW10509] gi|324115641|gb|EGC09579.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli E1167] gi|327250492|gb|EGE62200.1| hypothetical protein ECSTEC7V_4574 [Escherichia coli STEC_7v] gi|331052363|gb|EGI24400.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA206] gi|332085127|gb|EGI90305.1| hypothetical protein SD15574_4569 [Shigella dysenteriae 155-74] gi|332105092|gb|EGJ08438.1| GTPase EngB [Shigella sp. D9] gi|332345854|gb|AEE59188.1| conserved hypothetical protein [Escherichia coli UMNK88] gi|332998505|gb|EGK18103.1| hypothetical protein SFK272_4369 [Shigella flexneri K-272] gi|333014000|gb|EGK33361.1| hypothetical protein SFK227_4300 [Shigella flexneri K-227] Length = 210 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|170758960|ref|YP_001788547.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum A3 str. Loch Maree] gi|169405949|gb|ACA54360.1| GTP-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 194 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 15/188 (7%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P+ G PE+AF GRSNVGKS+LIN L NR+ L + S+ PG+T+ +NFFV D Sbjct: 18 GQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLINFFVIND------ 71 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M VD+PGYGYA+ K+ ++WG ++ +YL ER L+ + LL+D RH D ++ Sbjct: 72 ---NMYFVDLPGYGYAKVSKREKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTSDDINM 128 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGI 199 ++++ +V TK+DKL + + K K +IR+ + ++ SS+ ++G Sbjct: 129 YNWIKHYNYEVLVVGTKLDKLK----RNDINKNKKIIRDTLKMDKDDKILLISSLSKEGK 184 Query: 200 EVLRKAIL 207 E + + IL Sbjct: 185 EEVLEQIL 192 >gi|148381176|ref|YP_001255717.1| GTP-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153931772|ref|YP_001385551.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum A str. ATCC 19397] gi|153935229|ref|YP_001388957.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum A str. Hall] gi|153938105|ref|YP_001392578.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum F str. Langeland] gi|168179123|ref|ZP_02613787.1| GTP-binding protein [Clostridium botulinum NCTC 2916] gi|170757263|ref|YP_001782866.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum B1 str. Okra] gi|226950655|ref|YP_002805746.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum A2 str. Kyoto] gi|148290660|emb|CAL84789.1| probable GTP-binding protein Engb [Clostridium botulinum A str. ATCC 3502] gi|152927816|gb|ABS33316.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152931143|gb|ABS36642.1| GTP-binding protein [Clostridium botulinum A str. Hall] gi|152934001|gb|ABS39499.1| GTP-binding protein [Clostridium botulinum F str. Langeland] gi|169122475|gb|ACA46311.1| GTP-binding protein [Clostridium botulinum B1 str. Okra] gi|182669944|gb|EDT81920.1| GTP-binding protein [Clostridium botulinum NCTC 2916] gi|226842026|gb|ACO84692.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum A2 str. Kyoto] gi|295320563|gb|ADG00941.1| GTP-binding protein [Clostridium botulinum F str. 230613] Length = 194 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 15/185 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE+AF GRSNVGKS+LIN L NR+ L + S+ PG+T+ +NFFV D Sbjct: 21 PEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLINFFVIND--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ KK ++WG ++ +YL ER L+ + LL+D RH D +++++ Sbjct: 72 NMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTSDDINMYNW 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVL 202 + +V TK+DKL + + K K +IR+ + ++ SS+ ++G E + Sbjct: 132 IKHYNYEVLVVGTKLDKLK----RNDINKNKKIIRDTLKMDKDDKILLISSLSKEGKEEV 187 Query: 203 RKAIL 207 + IL Sbjct: 188 LEQIL 192 >gi|67458477|ref|YP_246101.1| GTPase EngB [Rickettsia felis URRWXCal2] gi|75537053|sp|Q4UNC2|ENGB_RICFE RecName: Full=Probable GTP-binding protein EngB gi|67004010|gb|AAY60936.1| Hypothetical GTP-binding protein [Rickettsia felis URRWXCal2] Length = 212 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 103/197 (52%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ +NFF Sbjct: 24 FVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFNL 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + W LI YL +LR V LLID R G Sbjct: 84 AD---------KLIIVDLPGYGFANVPISVKEQWEVLISYYLRNSYSLRLVNLLIDSRRG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+ V L +QI+ TK DK++ + NY V+ SS Sbjct: 135 IKENDKKVAELLLANKREFQIIFTKSDKVTDRKNLNDEAQNFLATLNYSC---NVMYVSS 191 Query: 194 VKRKGIEVLRKAILETI 210 ++G L+ ++ + I Sbjct: 192 RSKEGARELKASLAKCI 208 >gi|15834041|ref|NP_312814.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. Sakai] gi|161367480|ref|NP_290489.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 EDL933] gi|168755530|ref|ZP_02780537.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4401] gi|168768147|ref|ZP_02793154.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4486] gi|168780765|ref|ZP_02805772.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4076] gi|168786702|ref|ZP_02811709.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC869] gi|168799576|ref|ZP_02824583.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC508] gi|195937501|ref|ZP_03082883.1| GTPase EngB [Escherichia coli O157:H7 str. EC4024] gi|208807401|ref|ZP_03249738.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4206] gi|208814207|ref|ZP_03255536.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4045] gi|208819675|ref|ZP_03259995.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4042] gi|209398819|ref|YP_002273380.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4115] gi|217326295|ref|ZP_03442379.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. TW14588] gi|254795855|ref|YP_003080692.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. TW14359] gi|261223491|ref|ZP_05937772.1| GTP-binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257254|ref|ZP_05949787.1| GTP-binding protein [Escherichia coli O157:H7 str. FRIK966] gi|291285275|ref|YP_003502093.1| putative GTP-binding protein engB [Escherichia coli O55:H7 str. CB9615] gi|21362528|sp|Q8X8H0|ENGB_ECO57 RecName: Full=Probable GTP-binding protein EngB gi|238058983|sp|B5YZ00|ENGB_ECO5E RecName: Full=Probable GTP-binding protein EngB gi|13364263|dbj|BAB38210.1| essential GTPase for cell cycle [Escherichia coli O157:H7 str. Sakai] gi|189001573|gb|EDU70559.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4076] gi|189357180|gb|EDU75599.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4401] gi|189362605|gb|EDU81024.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4486] gi|189373339|gb|EDU91755.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC869] gi|189378061|gb|EDU96477.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC508] gi|208727202|gb|EDZ76803.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4206] gi|208735484|gb|EDZ84171.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4045] gi|208739798|gb|EDZ87480.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4042] gi|209160219|gb|ACI37652.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4115] gi|209752828|gb|ACI74721.1| hypothetical protein ECs4787 [Escherichia coli] gi|209752830|gb|ACI74722.1| hypothetical protein ECs4787 [Escherichia coli] gi|209752832|gb|ACI74723.1| hypothetical protein ECs4787 [Escherichia coli] gi|209752834|gb|ACI74724.1| hypothetical protein ECs4787 [Escherichia coli] gi|209752836|gb|ACI74725.1| hypothetical protein ECs4787 [Escherichia coli] gi|217322516|gb|EEC30940.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. TW14588] gi|254595255|gb|ACT74616.1| GTP-binding protein [Escherichia coli O157:H7 str. TW14359] gi|290765148|gb|ADD59109.1| Probable GTP-binding protein engB [Escherichia coli O55:H7 str. CB9615] gi|320191045|gb|EFW65695.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. EC1212] gi|320639202|gb|EFX08829.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. G5101] gi|320644590|gb|EFX13644.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. 493-89] gi|320649914|gb|EFX18422.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. H 2687] gi|320655221|gb|EFX23167.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320666007|gb|EFX33026.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. LSU-61] gi|326338133|gb|EGD61963.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1044] gi|326342573|gb|EGD66346.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1125] Length = 210 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|157828012|ref|YP_001494254.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia rickettsii str. 'Sheila Smith'] gi|166225976|sp|A8GQS1|ENGB_RICRS RecName: Full=Probable GTP-binding protein EngB gi|157800493|gb|ABV75746.1| GTPase EngB [Rickettsia rickettsii str. 'Sheila Smith'] Length = 212 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 103/199 (51%), Gaps = 12/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN GRT+ +NFF Sbjct: 24 FVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQINFFNL 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + WG LI YL LR V LLID R G Sbjct: 84 AD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+ V L +QI+ TK DK++ + NY V+ S+ Sbjct: 135 IKENDKKVADLLLANKREFQIIFTKSDKVTDHKNLHDEAQNFLATLNYSC---NVMYVSN 191 Query: 194 VKRKGIEVLRKAILETINY 212 ++G L+ ++ + I + Sbjct: 192 RSKEGARELKASLAKCIKF 210 >gi|291548431|emb|CBL21539.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus sp. SR1/5] Length = 203 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/152 (42%), Positives = 92/152 (60%), Gaps = 9/152 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P G PE+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ N Sbjct: 18 IPDTGRPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 AM LVD+PGYGYA+ + WG +I YL LR V+LL+D RH D+ ++ Sbjct: 69 EAMYLVDLPGYGYAKVSAAEKEKWGKMIEGYLHNSKELRAVFLLVDIRHKPSANDKQMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 ++ I+ TK+DKL + ++L++ + Sbjct: 129 WICHNGYEPVIIATKLDKLKRSQVAKSLKEIR 160 >gi|89895940|ref|YP_519427.1| hypothetical protein DSY3194 [Desulfitobacterium hafniense Y51] gi|219670373|ref|YP_002460808.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium hafniense DCB-2] gi|119369191|sp|Q24SK9|ENGB_DESHY RecName: Full=Probable GTP-binding protein EngB gi|254783194|sp|B8FVH0|ENGB_DESHD RecName: Full=Probable GTP-binding protein EngB gi|89335388|dbj|BAE84983.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219540633|gb|ACL22372.1| small GTP-binding protein domain protein [Desulfitobacterium hafniense DCB-2] Length = 201 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 113/205 (55%), Gaps = 18/205 (8%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F SA + ++G PE+ PEIA +GRSNVGKSSLIN +NR+NLART N PG+TQ Sbjct: 9 FVTSA-VNIKGYPELT------GPEIALAGRSNVGKSSLINKFINRRNLARTGNTPGKTQ 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNF+ D + VD+PGYGYA+ K+ +WG ++ Y S R LR V Sbjct: 62 MLNFYRIND---------QWSFVDLPGYGYAKVSKEIKANWGKMMEEYFSRRENLRAVIQ 112 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D RH DQ++ +FL + + +V TK DK+S + L + + + P H Sbjct: 113 VVDIRHVPSVEDQEMHAFLRNRGIPVLVVATKADKISKGQWGKHLSQIAKAL-HIPDWHI 171 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 +I S+ G+ L +A+ E ++ Sbjct: 172 -IITYSAETGLGVPELHEAVEEILS 195 >gi|15674911|ref|NP_269085.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes M1 GAS] gi|71910505|ref|YP_282055.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS5005] gi|306827517|ref|ZP_07460800.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes ATCC 10782] gi|24418393|sp|Q9A088|ENGB_STRP1 RecName: Full=Probable GTP-binding protein EngB gi|13622052|gb|AAK33806.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes M1 GAS] gi|71853287|gb|AAZ51310.1| GTP-binding protein [Streptococcus pyogenes MGAS5005] gi|304430315|gb|EFM33341.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes ATCC 10782] Length = 199 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/186 (41%), Positives = 103/186 (55%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ PG+TQ LNFF N+ + L Sbjct: 25 PQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFF------NIDDKL- 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ R LR V L+D RH + D ++ F Sbjct: 78 --RFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDF 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V TK DK+ P E N+ + ++ SSV+R GI+ Sbjct: 136 LKYYDIPVIVVATKADKI-PRGKWNKHESVVKKALNFDKSDTFIV-FSSVERIGIDDSWD 193 Query: 205 AILETI 210 AILE + Sbjct: 194 AILEQV 199 >gi|308174517|ref|YP_003921222.1| GTPase [Bacillus amyloliquefaciens DSM 7] gi|307607381|emb|CBI43752.1| GTPase involved in ribosome 50S subunit assembly [Bacillus amyloliquefaciens DSM 7] gi|328554436|gb|AEB24928.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens TA208] gi|328912840|gb|AEB64436.1| GTPase involved in ribosome 50S subunit assembly [Bacillus amyloliquefaciens LL3] Length = 195 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PDGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+A+ K ++WG +I Y++ R L+ ++D RH D +++ F Sbjct: 70 ELHFVDVPGYGFAKVSKSEREAWGRMIETYMTTREELKACVQIVDLRHAPSADDVNMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + ++ TK DK+ + L+ K + P E+I SS +KG + Sbjct: 130 LKYYGIPVIVIATKADKIPKGKWDKHLKVVKQTLDMDP--EDELILFSSETKKGKDEAWG 187 Query: 205 AILETIN 211 AI + I+ Sbjct: 188 AIKKMIS 194 >gi|229586341|ref|YP_002844842.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia africae ESF-5] gi|259645905|sp|C3PMD9|ENGB_RICAE RecName: Full=Probable GTP-binding protein EngB gi|228021391|gb|ACP53099.1| Hypothetical GTP-binding protein [Rickettsia africae ESF-5] Length = 212 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/150 (44%), Positives = 87/150 (58%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I +P PEIAF G+SNVGKSSLIN + + KNLA+ SN PGRT+ +NFF Sbjct: 24 FVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICSNKNLAKVSNTPGRTRQINFFNL 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + WG LI YL LR V LLID R G Sbjct: 84 AD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K+ D+ V L +QI+ TK DK++ Sbjct: 135 IKENDKKVADLLLANKREFQIIFTKSDKVT 164 >gi|21910141|ref|NP_664409.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS315] gi|28896160|ref|NP_802510.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes SSI-1] gi|25452936|sp|Q8K7V8|ENGB_STRP3 RecName: Full=Probable GTP-binding protein EngB gi|21904334|gb|AAM79212.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315] gi|28811410|dbj|BAC64343.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes SSI-1] Length = 199 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/186 (41%), Positives = 103/186 (55%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ PG+TQ LNFF N+ + L Sbjct: 25 PQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFF------NIDDKL- 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ R LR V L+D RH + D ++ F Sbjct: 78 --RFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDF 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V TK DK+ P E N+ + ++ SSV+R GI+ Sbjct: 136 LKYYDIPVIVVATKADKI-PHGKWNKHESVVKKALNFDKSDTFIV-FSSVERIGIDDSWD 193 Query: 205 AILETI 210 AILE + Sbjct: 194 AILEQV 199 >gi|154686955|ref|YP_001422116.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus amyloliquefaciens FZB42] gi|166225941|sp|A7Z7A9|ENGB_BACA2 RecName: Full=Probable GTP-binding protein EngB gi|154352806|gb|ABS74885.1| YsxC [Bacillus amyloliquefaciens FZB42] Length = 195 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 104/187 (55%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PDGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+A+ K ++WG +I Y++ R L+ ++D RH D +++ F Sbjct: 70 ELHFVDVPGYGFAKVSKSEREAWGRMIETYMTTREELKACVQIVDLRHAPSAEDVNMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + ++ TK DK+ + L+ K + P E+I SS +KG + Sbjct: 130 LKYYGIPVIVIATKADKIPKGKWDKHLKVVKQTLDMDP--EDELILFSSETKKGKDEAWG 187 Query: 205 AILETIN 211 AI + I+ Sbjct: 188 AIKKMIS 194 >gi|332686390|ref|YP_004456164.1| GTP-binding protein EngB [Melissococcus plutonius ATCC 35311] gi|332370399|dbj|BAK21355.1| GTP-binding protein EngB [Melissococcus plutonius ATCC 35311] Length = 193 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/182 (40%), Positives = 104/182 (57%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNF++ +D Sbjct: 19 PERELPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTLNFYLIED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 ++ VD+PGYGYA+ K WG +I Y++ R+ L V L+D RH D+ ++ F Sbjct: 70 SLYFVDVPGYGYAKVSKTERAKWGKMIETYITSRNQLEAVVSLVDFRHPPTVEDKQMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V TK+DK+ P++ E N+ + + I SSV +KG E + Sbjct: 130 LKYYEIPVILVATKVDKI-PSSKWNKHENIIKKTLNF-DSQDKFILFSSVTKKGKEEAWQ 187 Query: 205 AI 206 AI Sbjct: 188 AI 189 >gi|189183737|ref|YP_001937522.1| Era/Obg family GTP-binding protein [Orientia tsutsugamushi str. Ikeda] gi|189180508|dbj|BAG40288.1| Era/Obg family GTP-binding protein [Orientia tsutsugamushi str. Ikeda] Length = 207 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 104/195 (53%), Gaps = 13/195 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL G P PE F G+SNVGKSSLIN+L N+ +LAR S PGRT+ +NFF+ Sbjct: 21 FLLGASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKHSLARVSKTPGRTREINFFLI 80 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGY++ +W LI+ YL R LR +Y+LID R G Sbjct: 81 AN---------KLILVDLPGYGYSKTAVVTCKNWEKLILSYLENRKNLRLIYVLIDARRG 131 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D V + + + +IV TK DK+S + +K L+ + ++I TS Sbjct: 132 IKDNDLAVINLVHHFNYTMKIVFTKEDKISDLEKNSLIATSKNLL----DYNDKIIFTSI 187 Query: 194 VKRKGIEVLRKAILE 208 + G + ++ IL+ Sbjct: 188 RNKNGAQEIQYNILK 202 >gi|153813471|ref|ZP_01966139.1| hypothetical protein RUMOBE_03891 [Ruminococcus obeum ATCC 29174] gi|149830415|gb|EDM85507.1| hypothetical protein RUMOBE_03891 [Ruminococcus obeum ATCC 29174] Length = 201 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/187 (39%), Positives = 104/187 (55%), Gaps = 15/187 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P G PE+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ D Sbjct: 18 IPDTGLPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFYKIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGYAR + WG +I YL L+ V+LLID RH D+ ++ Sbjct: 70 -ELDLVDLPGYGYARVTPAEKEKWGKMIENYLHTSHNLKAVFLLIDIRHDPSANDRQMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ I+ TK+DKL + Q+ L+ + ++ VIP S+ ++G R Sbjct: 129 WILHNGYEPIIIATKLDKLKRSQVQKNLKAIREGLQ--LKKGTTVIPYSAETKQG----R 182 Query: 204 KAILETI 210 I E I Sbjct: 183 DEIWELI 189 >gi|311281672|ref|YP_003943903.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter cloacae SCF1] gi|308750867|gb|ADO50619.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter cloacae SCF1] Length = 208 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 16/196 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA---HPEVIP 190 +K +DQ + + + ++LTK DKL+ + L ++R TA +V Sbjct: 122 LKDLDQQMIEWAVDSGIQVLVLLTKADKLASGARKAQLN----MVREAATAFNGDVQVEA 177 Query: 191 TSSVKRKGIEVLRKAI 206 SS+K++G++ LR+ + Sbjct: 178 FSSLKKQGVDKLREKL 193 >gi|281419987|ref|ZP_06250986.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella copri DSM 18205] gi|281405787|gb|EFB36467.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella copri DSM 18205] Length = 201 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 107/198 (54%), Gaps = 13/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + + PK E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTISAPRVSMCPKDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NN LVD+PGYG+A+ K +I Y+ +R L V++LID RH Sbjct: 68 -------NN--EWYLVDLPGYGFAKRSKTVQKQLEQMISSYILQRQQLANVFVLIDVRHD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + V + IV TK DKL P A+ EK + + + A P TSS Sbjct: 119 QQKIDREFVDWLGESGVPFCIVFTKADKLGPVKARMNAEKWMHALEDRWEALPPYFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 K+ G R +L+ I+ Sbjct: 179 EKKLG----RDEVLDYID 192 >gi|332764612|gb|EGJ94844.1| cell division protein putative checkpoint GTPase [Shigella flexneri 2930-71] Length = 207 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 8 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 68 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 119 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKALLNMVREAVLAF-NGDVQVETFSS 177 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 178 LKKQGVDKLRQKL 190 >gi|165932710|ref|YP_001649499.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Iowa] gi|165907797|gb|ABY72093.1| GTP-binding protein [Rickettsia rickettsii str. Iowa] Length = 225 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 103/199 (51%), Gaps = 12/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN GRT+ +NFF Sbjct: 37 FVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQINFFNL 96 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + WG LI YL LR V LLID R G Sbjct: 97 AD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRG 147 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+ V L +QI+ TK DK++ + NY V+ S+ Sbjct: 148 IKENDKKVADLLLANKREFQIIFTKSDKVTDHKNLHDEAQNFLATLNYSC---NVMYVSN 204 Query: 194 VKRKGIEVLRKAILETINY 212 ++G L+ ++ + I + Sbjct: 205 RSKEGARELKASLAKCIKF 223 >gi|197120176|ref|YP_002140603.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter bemidjiensis Bem] gi|238690880|sp|B5EEM1|ENGB_GEOBB RecName: Full=Probable GTP-binding protein EngB gi|197089536|gb|ACH40807.1| GTPase EngB [Geobacter bemidjiensis Bem] Length = 214 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/151 (45%), Positives = 93/151 (61%), Gaps = 11/151 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F++ + P+ PEIAF+GRSNVGKSSL+N+LVNRKNL RTS+ PGRTQ +NFF V Sbjct: 8 FIKSATKPAHYPEGNLPEIAFAGRSNVGKSSLVNVLVNRKNLVRTSSTPGRTQLINFFQV 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 DF LVD+PGYGYA+ P W ++ YLS+R LR V L++D R Sbjct: 68 NDDF----------MLVDLPGYGYAKVPLAVKKEWRPMMETYLSKRRNLRGVVLILDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 + D + ++L +V +V+TK DK+S Sbjct: 118 TPTEEDLQMLAWLRAFSVPPIVVITKCDKVS 148 >gi|153206108|ref|ZP_01945371.1| GTP-binding protein [Coxiella burnetii 'MSU Goat Q177'] gi|212217903|ref|YP_002304690.1| ribosome biogenesis GTP-binding protein YsxC [Coxiella burnetii CbuK_Q154] gi|238058981|sp|B6J4E1|ENGB_COXB1 RecName: Full=Probable GTP-binding protein EngB gi|120577238|gb|EAX33862.1| GTP-binding protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012165|gb|ACJ19545.1| GTP-binding protein [Coxiella burnetii CbuK_Q154] Length = 205 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 94/168 (55%), Gaps = 9/168 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L E LP EIAF GRSN GKSS +NI+ K LARTS PGRTQ +NFF Sbjct: 15 YLTSAAEFDQLPPDQGAEIAFIGRSNAGKSSALNIITGIKGLARTSKTPGRTQMINFFAL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYGYA+ P+ W L+ YL +R L+ + +++D RH Sbjct: 75 NEHERL---------VDLPGYGYAKVPRMVQKRWEELVDSYLKKRRCLKGLVVVMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 +K++D+DV + + I+LTK DKLS A++TL + + I Y Sbjct: 126 LKEVDEDVIEWAVNYDIPIHILLTKSDKLSQNAAKKTLGEVQTAISAY 173 >gi|299471340|emb|CBN79295.1| YihA2, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 247 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/178 (39%), Positives = 102/178 (57%), Gaps = 5/178 (2%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP A PE+AF GRSN GKS+L+ L+ L R S +PG T+ +N+F ++ Sbjct: 60 LPTADTPEVAFIGRSNQGKSTLVGKLLKNPKLVRASKSPGCTKTVNYFALREGGA---ES 116 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDV 141 P LVD+PGYG+AR K+ V W + YL RS+ LR ++L+D RHG++ D+ + Sbjct: 117 PQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQM 176 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 SFL + V +VLTK+DK SP ++LE L ++P P V S+ K +G+ Sbjct: 177 LSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGM 234 >gi|152972673|ref|YP_001337819.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892278|ref|YP_002917012.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae NTUH-K2044] gi|262041647|ref|ZP_06014840.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|166225962|sp|A6TG68|ENGB_KLEP7 RecName: Full=Probable GTP-binding protein EngB gi|150957522|gb|ABR79552.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238544594|dbj|BAH60945.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041000|gb|EEW42078.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 210 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ P++ W + YL +R L+ + +L+D RH Sbjct: 71 AE---------GKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + + + + + +V P SS Sbjct: 122 LKDLDQQMIEWAVESDIQVLVLLTKADKLASGARKAQVNMVREAVLAF-NGDVQVEPFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 181 LKKSGVDKLRQKL 193 >gi|161485827|ref|NP_709663.3| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 2a str. 301] gi|161486407|ref|NP_839017.2| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 2a str. 2457T] gi|119369258|sp|Q83PF4|ENGB_SHIFL RecName: Full=Probable GTP-binding protein EngB gi|281603253|gb|ADA76237.1| putative GTP-binding protein engB [Shigella flexneri 2002017] gi|313647097|gb|EFS11552.1| hypothetical protein SF2457T_4463 [Shigella flexneri 2a str. 2457T] gi|332751497|gb|EGJ81898.1| hypothetical protein SFK671_4264 [Shigella flexneri K-671] gi|332753187|gb|EGJ83570.1| hypothetical protein SF274771_4128 [Shigella flexneri 2747-71] gi|332997588|gb|EGK17203.1| hypothetical protein SFVA6_4456 [Shigella flexneri VA-6] gi|332998615|gb|EGK18212.1| hypothetical protein SFK218_4644 [Shigella flexneri K-218] gi|333013840|gb|EGK33202.1| hypothetical protein SFK304_4498 [Shigella flexneri K-304] Length = 210 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKALLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|56808898|ref|ZP_00366607.1| COG0218: Predicted GTPase [Streptococcus pyogenes M49 591] gi|94988379|ref|YP_596480.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS9429] gi|94990259|ref|YP_598359.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS10270] gi|94992261|ref|YP_600360.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS2096] gi|209559239|ref|YP_002285711.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes NZ131] gi|119369269|sp|Q1JC92|ENGB_STRPB RecName: Full=Probable GTP-binding protein EngB gi|119369270|sp|Q1JM76|ENGB_STRPC RecName: Full=Probable GTP-binding protein EngB gi|119369271|sp|Q1JHC1|ENGB_STRPD RecName: Full=Probable GTP-binding protein EngB gi|238058988|sp|B5XL04|ENGB_STRPZ RecName: Full=Probable GTP-binding protein EngB gi|94541887|gb|ABF31936.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS9429] gi|94543767|gb|ABF33815.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS10270] gi|94545769|gb|ABF35816.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS2096] gi|209540440|gb|ACI61016.1| GTP-binding protein EngB [Streptococcus pyogenes NZ131] Length = 199 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/186 (41%), Positives = 103/186 (55%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ PG+TQ LNFF N+ + L Sbjct: 25 PQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFF------NIDDKL- 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ R LR V L+D RH + D ++ F Sbjct: 78 --RFVDVPGYGYAKVSKSERAKWGKMIEEYLTTRDNLRAVVSLVDLRHAPSKEDIQMYDF 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V TK DK+ P E N+ + ++ SSV+R GI+ Sbjct: 136 LKYYDIPVIVVATKADKI-PRGKWNKHESVVKKALNFDKSDTFIV-FSSVERIGIDDSWD 193 Query: 205 AILETI 210 AILE + Sbjct: 194 AILEQV 199 >gi|161984817|ref|YP_410156.2| ribosome biogenesis GTP-binding protein YsxC [Shigella boydii Sb227] gi|119369256|sp|Q31UD0|ENGB_SHIBS RecName: Full=Probable GTP-binding protein EngB gi|320185488|gb|EFW60256.1| GTP-binding protein EngB [Shigella flexneri CDC 796-83] gi|332088563|gb|EGI93677.1| hypothetical protein SB359474_4457 [Shigella boydii 3594-74] Length = 210 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRHSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|332518992|ref|ZP_08395459.1| ribosome biogenesis GTP-binding protein YsxC [Lacinutrix algicola 5H-3-7-4] gi|332044840|gb|EGI81033.1| ribosome biogenesis GTP-binding protein YsxC [Lacinutrix algicola 5H-3-7-4] Length = 206 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 98/185 (52%), Gaps = 9/185 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E+ PK PE AF GRSNVGKSSLIN+L +RK+LA+TS PG+TQ +N F+ Sbjct: 8 FVISNSEVSKCPKDMLPEYAFIGRSNVGKSSLINMLTSRKSLAKTSGRPGKTQLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYAR K + I +Y +R L C ++L+D RH Sbjct: 68 N---------KEWYLVDLPGYGYARVSKSTKKVFQKFITKYFEQREQLVCAFVLVDIRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ID + +L + + + I+ TK DKL P +E + ++ P+ TSS Sbjct: 119 PQPIDLEFMQYLGEGGIPFCIIFTKADKLKPNAITRHVEDYRKIMLETWEEMPQHFITSS 178 Query: 194 VKRKG 198 K G Sbjct: 179 SKDIG 183 >gi|161617123|ref|YP_001591088.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189037187|sp|A9MYC7|ENGB_SALPB RecName: Full=Probable GTP-binding protein EngB gi|161366487|gb|ABX70255.1| hypothetical protein SPAB_04962 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 210 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDRGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|302877399|ref|YP_003845963.1| ribosome biogenesis GTP-binding protein YsxC [Gallionella capsiferriformans ES-2] gi|302580188|gb|ADL54199.1| ribosome biogenesis GTP-binding protein YsxC [Gallionella capsiferriformans ES-2] Length = 208 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 104/188 (55%), Gaps = 12/188 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V I LP G E+AF GRSN GKSS IN L N LA TS PGRTQHLN+F Sbjct: 9 FYTTVNHIKDLPMHGGREVAFVGRSNAGKSSAINTLANHVRLAYTSKTPGRTQHLNYF-- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N+ +VD+PGYGYA+ P + W L+ YL +R L + +++D R Sbjct: 67 ----SLGND---GYIVDLPGYGYAKVPPEAKRHWEALLSTYLQKREELSGLIVIMDIRRP 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTAHPEVIPTS 192 + ++D+ + + I+LTK DKLS + TL K K YL NYP ++ S Sbjct: 120 LLELDETMLDWFATTGKPVHILLTKSDKLSRQQSTLTLMKVKAYLAENYPQCSVQLF--S 177 Query: 193 SVKRKGIE 200 S+K++G+E Sbjct: 178 SLKKQGLE 185 >gi|254039076|ref|ZP_04873126.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|226838512|gb|EEH70541.1| conserved hypothetical protein [Escherichia sp. 1_1_43] Length = 210 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + ++ SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQIETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|73542832|ref|YP_297352.1| GTPase EngB [Ralstonia eutropha JMP134] gi|119369239|sp|Q46WH5|ENGB_CUPPJ RecName: Full=Probable GTP-binding protein EngB gi|72120245|gb|AAZ62508.1| cell division checkpoint GTPase YihA [Ralstonia eutropha JMP134] Length = 228 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 8/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSRTPGRTQHINYFT- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +K P LVD+PGYGYA W GL+ Y+ RS L + L++D R Sbjct: 68 --VAPVKAPDPIAFLVDLPGYGYAEVSGSAKYHWQGLLSDYVQTRSQLSGLILMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 +D + + ++LTK DKL+ + + L +T+ ++ Y +P Sbjct: 126 FTDLDCQMVEWFLPTGKPVHVLLTKADKLTNSENAKALRETRKMLEGYAEQLATPVPLTA 185 Query: 192 ---SSVKRKGIEVLRKAI 206 SS+KR+GIE ++ I Sbjct: 186 QLFSSLKRRGIEEAQRVI 203 >gi|328943788|ref|ZP_08241253.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium vaginae DSM 15829] gi|327491757|gb|EGF23531.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium vaginae DSM 15829] Length = 203 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 13/185 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP + PEI F GRSNVGKSSLIN L+ RK LARTS+ PG+T ++NFF N+ Sbjct: 28 LPASTTPEIIFCGRSNVGKSSLINKLLKRKALARTSSQPGKTANINFF----------NV 77 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYG+A+ K + W LI Y + + V LID R +Q+D+D+ + Sbjct: 78 DGIRFVDLPGYGFAKVSKAERERWSSLISGYFEDNRSFNLVICLIDIRIDAQQLDKDMLT 137 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + + Y + TK DKL+ + A L L + + I TS+ +G+ LR Sbjct: 138 YVIHEELPYVVAFTKADKLTHSKA---LAARTKLCKALEVPQDKTIITSAETGEGMADLR 194 Query: 204 KAILE 208 + I E Sbjct: 195 RCIEE 199 >gi|16762431|ref|NP_458048.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16767266|ref|NP_462881.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143919|ref|NP_807261.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415847|ref|YP_152922.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62182463|ref|YP_218880.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167551521|ref|ZP_02345276.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167995106|ref|ZP_02576196.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232924|ref|ZP_02657982.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237615|ref|ZP_02662673.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244253|ref|ZP_02669185.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263108|ref|ZP_02685081.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467330|ref|ZP_02701167.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194447921|ref|YP_002048005.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468507|ref|ZP_03074491.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736984|ref|YP_002116922.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251708|ref|YP_002148921.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264265|ref|ZP_03164339.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200387738|ref|ZP_03214350.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930344|ref|ZP_03221321.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213162853|ref|ZP_03348563.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425461|ref|ZP_03358211.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581475|ref|ZP_03363301.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609177|ref|ZP_03369003.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650654|ref|ZP_03380707.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852344|ref|ZP_03381876.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238913941|ref|ZP_04657778.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289829362|ref|ZP_06546974.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54037056|sp|P64069|ENGB_SALTI RecName: Full=Probable GTP-binding protein EngB gi|54040979|sp|P64068|ENGB_SALTY RecName: Full=Probable GTP-binding protein EngB gi|75479463|sp|Q57HL3|ENGB_SALCH RecName: Full=Probable GTP-binding protein EngB gi|81599694|sp|Q5PKC6|ENGB_SALPA RecName: Full=Probable GTP-binding protein EngB gi|238690012|sp|B5EZX3|ENGB_SALA4 RecName: Full=Probable GTP-binding protein EngB gi|238690599|sp|B4TBT8|ENGB_SALHS RecName: Full=Probable GTP-binding protein EngB gi|238690710|sp|B4TPL2|ENGB_SALSV RecName: Full=Probable GTP-binding protein EngB gi|25306632|pir||AG0950 ATP/GTP-binding protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16422563|gb|AAL22840.1| putative GTPase involved in coordination of cell cycle [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504736|emb|CAD03099.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139555|gb|AAO71121.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56130104|gb|AAV79610.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62130096|gb|AAX67799.1| putative GTPase, involved in coordination of cell cycle [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194406225|gb|ACF66444.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194454871|gb|EDX43710.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712486|gb|ACF91707.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630199|gb|EDX48839.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197215411|gb|ACH52808.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242520|gb|EDY25140.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289331|gb|EDY28696.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199604836|gb|EDZ03381.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320748|gb|EDZ05950.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323760|gb|EDZ11599.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327140|gb|EDZ13904.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205332795|gb|EDZ19559.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336858|gb|EDZ23622.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348121|gb|EDZ34752.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|267996284|gb|ACY91169.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312915114|dbj|BAJ39088.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225285|gb|EFX50343.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613071|gb|EFY10021.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619142|gb|EFY16025.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322626008|gb|EFY22820.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626534|gb|EFY23340.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632355|gb|EFY29103.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635165|gb|EFY31886.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642758|gb|EFY39347.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647923|gb|EFY44395.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650673|gb|EFY47074.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652856|gb|EFY49193.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657171|gb|EFY53451.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662343|gb|EFY58558.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666878|gb|EFY63054.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672148|gb|EFY68263.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675870|gb|EFY71942.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681716|gb|EFY77742.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684091|gb|EFY80100.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716957|gb|EFZ08528.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323132342|gb|ADX19772.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193363|gb|EFZ78578.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197720|gb|EFZ82853.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200708|gb|EFZ85779.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207289|gb|EFZ92241.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211490|gb|EFZ96331.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218465|gb|EGA03173.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221055|gb|EGA05487.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226030|gb|EGA10249.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231710|gb|EGA15822.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236043|gb|EGA20121.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239537|gb|EGA23586.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243871|gb|EGA27882.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249233|gb|EGA33150.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250525|gb|EGA34408.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258979|gb|EGA42631.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260224|gb|EGA43847.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265343|gb|EGA48840.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270565|gb|EGA54011.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332990829|gb|AEF09812.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 210 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|291085891|ref|ZP_06354360.2| hypothetical protein CIT292_08820 [Citrobacter youngae ATCC 29220] gi|291069529|gb|EFE07638.1| ribosome biogenesis GTP-binding protein YsxC [Citrobacter youngae ATCC 29220] Length = 215 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 16 FVMSAPDIRHLPSDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 76 VD---------GKRLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + V ++LTK DKL+ + L + + + +V SS Sbjct: 127 LKDLDQQMILWAVESNVQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 186 LKKLGVDKLRQKL 198 >gi|158321195|ref|YP_001513702.1| small GTP-binding protein [Alkaliphilus oremlandii OhILAs] gi|166920107|sp|A8MIS4|ENGB_ALKOO RecName: Full=Probable GTP-binding protein EngB gi|158141394|gb|ABW19706.1| small GTP-binding protein [Alkaliphilus oremlandii OhILAs] Length = 208 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIA +GRSNVGKSS +N ++ R+ LAR S +PG+T+ +NF++ NN Sbjct: 19 PENGLPEIALAGRSNVGKSSTVNTILKRRKLARVSASPGKTRTINFYIV-------NN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +VD+PGYGYA+ K ++WG ++ YLS R L V LL+D RH D+ ++ + Sbjct: 70 EFHIVDLPGYGYAKVSKGEKETWGKMMETYLSSRKNLYEVILLVDIRHEPTADDKMMYDW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVL 202 + ++ TK DK+S Q+ + +IR PE +IP SS+KR+GI+ L Sbjct: 130 IKHYGYGSIVIATKSDKISRGAYQKHFK----MIREKLGMSPEDKIIPISSLKREGIDKL 185 Query: 203 RKAILE 208 +I E Sbjct: 186 WHSIEE 191 >gi|78186100|ref|YP_374143.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium luteolum DSM 273] gi|119369228|sp|Q3B6D1|ENGB_PELLD RecName: Full=Probable GTP-binding protein EngB gi|78166002|gb|ABB23100.1| GTP-binding protein [Chlorobium luteolum DSM 273] Length = 207 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 101/185 (54%), Gaps = 13/185 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R V + LP PEI F+GRSNVGKSSL+N L RK LA+TS+ PG+T+ LN+F+ Sbjct: 8 FIRSVSALQDLPDERVPEIVFAGRSNVGKSSLLNSLTGRKGLAKTSSTPGKTRLLNYFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYGYA D+WG L+ Y+ R + V LL+D RH Sbjct: 68 ND---------DLYFVDIPGYGYAAVSHTEKDAWGRLLAGYVGGRQAIALVVLLLDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+++ FL Y IVLTK DKL+ Q+ K K + + ++ SS Sbjct: 119 AMESDREMMEFLAYHDRPYGIVLTKDDKLT----QKERAKAKRVTASCALNAEFIVSYSS 174 Query: 194 VKRKG 198 + KG Sbjct: 175 ISGKG 179 >gi|332667993|ref|YP_004450781.1| GTP-binding protein engB [Haliscomenobacter hydrossis DSM 1100] gi|332336807|gb|AEE53908.1| GTP-binding protein engB [Haliscomenobacter hydrossis DSM 1100] Length = 227 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 13/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P IG PK PE AF GRSNVGKSSLIN+L ++K LA TS PG+TQ LN+++ Sbjct: 30 FKGSFPSIGQCPKEEWPEFAFIGRSNVGKSSLINMLCDKKELAHTSQKPGKTQLLNYYLI 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +VD+PGYGYA+ + W +I YL +R +L C ++L+D Sbjct: 90 NQ---------QWYIVDLPGYGYAKISQSKRKEWRKMIQDYLVKRPSLCCAFVLVDSNIK 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + ++L + + + +V TK D+L P +E ++ + + Y P+ TS+ Sbjct: 141 PQEKDIEFINWLGEMHIPFVLVFTKTDRLKPQDIEENIKLMQEKLLEYWNELPQQFFTSA 200 Query: 194 VKRKGIEVLRKAILETIN 211 KR G R IL+ I Sbjct: 201 SKRVG----RTEILDYIE 214 >gi|253702485|ref|YP_003023674.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M21] gi|259645898|sp|C6E8C5|ENGB_GEOSM RecName: Full=Probable GTP-binding protein EngB gi|251777335|gb|ACT19916.1| small GTP-binding protein [Geobacter sp. M21] Length = 214 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/151 (46%), Positives = 92/151 (60%), Gaps = 11/151 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F++ P+ PEIAF+GRSNVGKSSL+N+LVNRKNL RTS+ PGRTQ +NFF V Sbjct: 8 FIKSATRPAHYPEGHLPEIAFAGRSNVGKSSLVNVLVNRKNLVRTSSTPGRTQLINFFQV 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 DF LVD+PGYGYA+ P W ++ YLS+R LR V L++D R Sbjct: 68 NDDF----------MLVDLPGYGYAKVPLAVKKEWRPMMETYLSKRRNLRGVVLILDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 + D + ++L +V IV+TK DK+S Sbjct: 118 TPTEEDLQMLTWLRAFSVPPVIVITKCDKVS 148 >gi|308233841|ref|ZP_07664578.1| small GTP-binding protein domain [Atopobium vaginae DSM 15829] Length = 195 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 13/185 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP + PEI F GRSNVGKSSLIN L+ RK LARTS+ PG+T ++NFF N+ Sbjct: 20 LPASTTPEIIFCGRSNVGKSSLINKLLKRKALARTSSQPGKTANINFF----------NV 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYG+A+ K + W LI Y + + V LID R +Q+D+D+ + Sbjct: 70 DGIRFVDLPGYGFAKVSKAERERWSSLISGYFEDNRSFNLVICLIDIRIDAQQLDKDMLT 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + + Y + TK DKL+ + A L L + + I TS+ +G+ LR Sbjct: 130 YVIHEELPYVVAFTKADKLTHSKA---LAARTKLCKALEVPQDKTIITSAETGEGMADLR 186 Query: 204 KAILE 208 + I E Sbjct: 187 RCIEE 191 >gi|293363371|ref|ZP_06610193.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma alligatoris A21JP2] gi|292553040|gb|EFF41791.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma alligatoris A21JP2] Length = 195 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/178 (41%), Positives = 100/178 (56%), Gaps = 12/178 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F GRSNVGKSSL+N +VN K+LAR S PGRTQ LN+F N +VD Sbjct: 21 EICFWGRSNVGKSSLLNAIVNNKSLARVSKTPGRTQLLNYF---------ENSQKQVIVD 71 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ K D +I YL + + L+ + LLID RHG+ ID+D+ +L + Sbjct: 72 LPGYGYAKLSKSQKDKMLIMIDEYLQKNTRLKALILLIDSRHGITNIDRDIIKYLFSIKI 131 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V TKIDKL+ + + +K +NY + I SS + GI+ L K I E Sbjct: 132 PIYLVYTKIDKLNQKEKSQLSKLSKEEYKNYNCPY---IFVSSQNKFGIDALNKNIQE 186 >gi|284038921|ref|YP_003388851.1| ribosome biogenesis GTP-binding protein YsxC [Spirosoma linguale DSM 74] gi|283818214|gb|ADB40052.1| ribosome biogenesis GTP-binding protein YsxC [Spirosoma linguale DSM 74] Length = 201 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/177 (40%), Positives = 104/177 (58%), Gaps = 11/177 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE AF GRSNVGKSSLIN+L +R +LA+ S PG+TQ +N F+ + Sbjct: 19 PKPDRPEYAFIGRSNVGKSSLINMLTSRSSLAKISGKPGKTQLINHFIIDN--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K + + LI YL+ R L C+++L+D R +++D D + Sbjct: 70 EWYLVDLPGYGYAQVSKTEREKFAALIDGYLTSRPNLLCIFVLVDSRIAPQKLDLDFMAN 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTAHPEVIPTSSVKRKGIE 200 L ++ + + IV TK +KL PT Q TLE + L+ ++ A P+ TS+V G E Sbjct: 130 LGERGLPFVIVFTKTEKLGPTKLQATLETYRDRLLEDWEEA-PQFFVTSAVTAVGRE 185 >gi|229824055|ref|ZP_04450124.1| hypothetical protein GCWU000282_01359 [Catonella morbi ATCC 51271] gi|229786409|gb|EEP22523.1| hypothetical protein GCWU000282_01359 [Catonella morbi ATCC 51271] Length = 195 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN ++ RK LARTS+ PG+TQ LNF+ D + Sbjct: 19 PQDALPEVALAGRSNVGKSSFINKMIGRKGLARTSSQPGKTQTLNFY---DINQ------ 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYAR K WG +I YL R +R ++LL+D RH ++D+ + F Sbjct: 70 TFRFVDVPGYGYARVSKTARAEWGKMIEHYLLNRDNVRVLFLLMDFRHEPTELDKAMKDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 D+ + Y I+LTK+DK+ + + L K Sbjct: 130 ADEAQIPYAIILTKVDKIKKSQWNKHLSMYK 160 >gi|39998104|ref|NP_954055.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sulfurreducens PCA] gi|81831965|sp|Q748I9|ENGB_GEOSL RecName: Full=Probable GTP-binding protein EngB gi|39985049|gb|AAR36405.1| GTP-binding protein [Geobacter sulfurreducens PCA] Length = 206 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/181 (40%), Positives = 104/181 (57%), Gaps = 16/181 (8%) Query: 22 GLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 G P+ PP EIAF GRSNVGKSSLIN+LVNRK+L RTS+ PGRTQ +NFF Sbjct: 13 GTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFRVNG-- 70 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ LVD+PGYG+AR P + WG ++ YL+ RS L CV L++D R + Sbjct: 71 -------SLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAEE 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + +L + +V+TK DK+S E ++ + R A E+ S++ R+ Sbjct: 124 DRLMLQWLRAYDIPVLVVITKCDKVS---KNERAKQASLISRTLGLAPDEMAFFSALSRE 180 Query: 198 G 198 G Sbjct: 181 G 181 >gi|330800863|ref|XP_003288452.1| hypothetical protein DICPUDRAFT_34085 [Dictyostelium purpureum] gi|325081511|gb|EGC35024.1| hypothetical protein DICPUDRAFT_34085 [Dictyostelium purpureum] Length = 451 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 112/205 (54%), Gaps = 11/205 (5%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +++ F+K A + + + PK P++AF G+SN GKSSL+N ++NR ++A S P Sbjct: 187 ANSFFSKGASLDSMAIKGVDF-PKKSYPQVAFLGKSNAGKSSLLNAILNR-DMAYVSKKP 244 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 G T+ +NF+ + LVD+PGYG+A+ KK WG I YL L Sbjct: 245 GCTKSINFYQL---------WEKIYLVDLPGYGFAKVSKKKSSVWGEAISEYLLTTPNLF 295 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 ++LLID R G+ + D + +D+ VS+QIVLTKIDK P+ + + K +I Sbjct: 296 KIFLLIDSRIGIHKNDIEAIELIDQHKVSFQIVLTKIDKTKPSILKGIYNQLKDIINETS 355 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAIL 207 P +I TS+++ G+ +R IL Sbjct: 356 CCLPTIIQTSALESSGLNEIRSVIL 380 >gi|71274790|ref|ZP_00651078.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Dixon] gi|71901070|ref|ZP_00683179.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Ann-1] gi|170729963|ref|YP_001775396.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa M12] gi|71164522|gb|EAO14236.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Dixon] gi|71729152|gb|EAO31274.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Ann-1] gi|167964756|gb|ACA11766.1| GTP-binding protein [Xylella fastidiosa M12] Length = 219 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 102/193 (52%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L I LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 26 YLLSAHTIHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTV 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P LVD+PGYGYA+ PK+ W I Y +R LR + +++D RH Sbjct: 86 T---------PQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHP 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D + ++ ++ + Q +LTK DKL +TL+K + + + H ++ SS Sbjct: 137 LKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHIDIQTFSS 196 Query: 194 VKRKGIEVLRKAI 206 R+G+E L I Sbjct: 197 KSRQGVEQLHTVI 209 >gi|298507043|gb|ADI85766.1| GTPase EngB [Geobacter sulfurreducens KN400] Length = 206 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/181 (40%), Positives = 104/181 (57%), Gaps = 16/181 (8%) Query: 22 GLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 G P+ PP EIAF GRSNVGKSSLIN+LVNRK+L RTS+ PGRTQ +NFF Sbjct: 13 GTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFRVNG-- 70 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ LVD+PGYG+AR P + WG ++ YL+ RS L CV L++D R + Sbjct: 71 -------SLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAEE 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + +L + +V+TK DK+S E ++ + R A E+ S++ R+ Sbjct: 124 DRLMLQWLRAYDIPVLVVITKCDKVS---KNERAKQASLISRTLGLAPDEMAFFSALSRE 180 Query: 198 G 198 G Sbjct: 181 G 181 >gi|261342937|ref|ZP_05970795.1| hypothetical protein ENTCAN_09535 [Enterobacter cancerogenus ATCC 35316] gi|288314685|gb|EFC53623.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter cancerogenus ATCC 35316] Length = 209 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ P++ W + YL +R L+ + +L+D RH Sbjct: 71 AE---------GKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ + ++ ++LTK DKL+ + + + + + +V P SS Sbjct: 122 LKDLDQQMIAWAVESDIAVLVLLTKADKLASGARKAQVNMVREAVLAF-NGDVQVEPFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|118581676|ref|YP_902926.1| ribosome biogenesis GTP-binding protein YsxC [Pelobacter propionicus DSM 2379] gi|166225967|sp|A1AU48|ENGB_PELPD RecName: Full=Probable GTP-binding protein EngB gi|118504386|gb|ABL00869.1| small GTP-binding protein [Pelobacter propionicus DSM 2379] Length = 200 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/178 (41%), Positives = 102/178 (57%), Gaps = 12/178 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSLIN+L NRK+L RTS+ PGRTQ +NFF D + + + LV Sbjct: 24 PEVAFVGRSNVGKSSLINVLANRKSLVRTSSTPGRTQLINFF---DINGV------LTLV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+AP WG +I YL+ R LR V L++D R D + +L+ Sbjct: 75 DLPGYGYAKAPPDVRKQWGPMIETYLARRGNLRAVVLILDIRRIPSDGDLQMLGWLETYD 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + VLTK DKLS E ++T + E++ S++ R G + + K +L Sbjct: 135 IPPIFVLTKCDKLSKV---ERAKQTALIASAIKRDRNELLHFSALSRDGRDAVWKEVL 189 >gi|238650566|ref|YP_002916418.1| GTPase EngB [Rickettsia peacockii str. Rustic] gi|259645906|sp|C4K1B9|ENGB_RICPU RecName: Full=Probable GTP-binding protein EngB gi|238624664|gb|ACR47370.1| GTPase EngB [Rickettsia peacockii str. Rustic] Length = 212 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 67/150 (44%), Positives = 86/150 (57%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN GRT+ +NFF Sbjct: 24 FVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQINFFNL 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + WG LI YL LR V LLID R G Sbjct: 84 AD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K+ D+ V L +QI+ TK DK++ Sbjct: 135 IKENDKKVADLLLANKREFQIIFTKSDKVT 164 >gi|168335351|ref|ZP_02693446.1| GTPase EngB [Epulopiscium sp. 'N.t. morphotype B'] Length = 196 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 71/177 (40%), Positives = 106/177 (59%), Gaps = 11/177 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P EIAF+G+SNVGKSSLIN+L+NRK LARTS+ PG+TQ +NF+ +D N Sbjct: 18 FPDNNQIEIAFAGKSNVGKSSLINVLINRKALARTSSTPGKTQTINFYNIQDKFN----- 72 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ K +SWG I YL +RS+L+ V LLID RH + D+ +++ Sbjct: 73 ----FVDLPGYGYAKVSKTLRESWGKFIEDYLGKRSSLKQVVLLIDIRHAPSENDKLMYN 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ + +V TK+DK+ + + + K +++ T +IP S+ + G E Sbjct: 129 WISFFHDNVLVVATKVDKIKRSQIAKHISIIKSVLQLRTT--DRIIPFSAATKVGKE 183 >gi|54293086|ref|YP_125501.1| GTPase EngB [Legionella pneumophila str. Lens] gi|54296120|ref|YP_122489.1| ribosome biogenesis GTP-binding protein YsxC [Legionella pneumophila str. Paris] gi|81601577|sp|Q5X097|ENGB_LEGPL RecName: Full=Probable GTP-binding protein EngB gi|81602058|sp|Q5X8V4|ENGB_LEGPA RecName: Full=Probable GTP-binding protein EngB gi|53749905|emb|CAH11287.1| hypothetical protein lpp0139 [Legionella pneumophila str. Paris] gi|53752918|emb|CAH14354.1| hypothetical protein lpl0124 [Legionella pneumophila str. Lens] gi|307608869|emb|CBW98267.1| hypothetical protein LPW_01251 [Legionella pneumophila 130b] Length = 200 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 104/193 (53%), Gaps = 16/193 (8%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ + LP+ E+AF+GRSN GKSS +N L N KNLARTS PGRTQ +N F Sbjct: 10 VFLKSAARVNQLPEDSGYEVAFAGRSNAGKSSALNCLTNNKNLARTSKTPGRTQLINLFS 69 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ + W + YL R LR + LL+D RH Sbjct: 70 LDE---------QRRLVDLPGYGYAKVAMEVKLEWQKNLAHYLEARQCLRGLILLMDVRH 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT- 191 +K +DQ + ++ + + I+LTK DKLS + + + K +R Y ++ Sbjct: 121 PLKDLDQILVNWALHRELPVHILLTKADKLSRSEVKNAVLK----VRQYYELAEHLVSVQ 176 Query: 192 --SSVKRKGIEVL 202 SSVK+ G+E L Sbjct: 177 AFSSVKKDGVEEL 189 >gi|89092189|ref|ZP_01165143.1| hypothetical protein MED92_05238 [Oceanospirillum sp. MED92] gi|89083277|gb|EAR62495.1| hypothetical protein MED92_05238 [Oceanospirillum sp. MED92] Length = 218 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 8/190 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + ++ P+ E+AF+GRSN GKSS IN L N LARTS PGRTQ +NFF Sbjct: 15 FNKSAAKLHQCPEDIGAEVAFAGRSNAGKSSAINTLTNNGKLARTSKTPGRTQLINFF-- 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D NL + LVD+PGYGYA+ P + W + YL +R L+ V L++D RH Sbjct: 73 -DL-----NLEGVRLVDLPGYGYAKVPVEMKVHWQKHLGEYLEKRQCLQGVVLVMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ DQ + + + + ++LTK DKL AQ T+ K + ++ V S+ Sbjct: 127 MKEFDQMMVEWCENSQMPLHVLLTKADKLKKGPAQSTMLKLRKELQAVLGDLVTVQTFSA 186 Query: 194 VKRKGIEVLR 203 +K++G++ LR Sbjct: 187 LKKQGVDQLR 196 >gi|328865389|gb|EGG13775.1| hypothetical protein DFA_11536 [Dictyostelium fasciculatum] Length = 453 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/179 (40%), Positives = 101/179 (56%), Gaps = 10/179 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IAF GRSNVGKSSL+N L+ + LA S PG TQ +NF+ D + LV Sbjct: 229 PQIAFLGRSNVGKSSLLNALLGNQ-LANVSKTPGCTQSVNFYSIWD---------KLMLV 278 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGY++ K WG I +L L ++LLID R G ++ D +V LD Sbjct: 279 DLPGYGYSKVSKDKAAVWGRSISEFLITSPHLIKLFLLIDSRIGCQKNDLEVMKLLDDHR 338 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V++QIVLTK+DK +P + K I + + P V+ SS++ KGI+ +R IL+ Sbjct: 339 VAFQIVLTKVDKTTPNALKRIYRTLKETINDNVSCLPNVLQCSSIEMKGIQQIRSIILD 397 >gi|330831500|ref|YP_004394452.1| GTPase EngB [Aeromonas veronii B565] gi|328806636|gb|AEB51835.1| GTPase EngB [Aeromonas veronii B565] Length = 205 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/194 (37%), Positives = 104/194 (53%), Gaps = 10/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+I LP G EIAF+GRSN GKSS +N L KNLARTS PGRTQ +N F + Sbjct: 1 MTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINLFELE 60 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 P LVD+PGYGYA+ P + W + YL R +L+ + +L+D RH + Sbjct: 61 ---------PGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K D ++ + + + ++LTK DKLSP + K + + N + +V SS+ Sbjct: 112 KDTDMNMLEWSSHRQLPVMLLLTKADKLSPGPRNNQVIKVRQAVANL-GSQIQVEAFSSL 170 Query: 195 KRKGIEVLRKAILE 208 G+E L + + E Sbjct: 171 TNIGVEKLAQTLTE 184 >gi|154707542|ref|YP_001423657.1| ribosome biogenesis GTP-binding protein YsxC [Coxiella burnetii Dugway 5J108-111] gi|165919241|ref|ZP_02219327.1| GTP-binding protein [Coxiella burnetii RSA 334] gi|212211813|ref|YP_002302749.1| ribosome biogenesis GTP-binding protein YsxC [Coxiella burnetii CbuG_Q212] gi|189037175|sp|A9KBW2|ENGB_COXBN RecName: Full=Probable GTP-binding protein EngB gi|238058982|sp|B6J2X4|ENGB_COXB2 RecName: Full=Probable GTP-binding protein EngB gi|154356828|gb|ABS78290.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111] gi|165917035|gb|EDR35639.1| GTP-binding protein [Coxiella burnetii RSA 334] gi|212010223|gb|ACJ17604.1| GTP-binding protein [Coxiella burnetii CbuG_Q212] Length = 205 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 94/168 (55%), Gaps = 9/168 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L E LP EIAF GRSN GKSS +NI+ K LARTS PGRTQ +NFF Sbjct: 15 YLTSAAEFDQLPPDQGAEIAFIGRSNAGKSSALNIITGIKGLARTSKTPGRTQMINFFAL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYGYA+ P+ W L+ YL +R L+ + +++D RH Sbjct: 75 NEHERL---------VDLPGYGYAKVPRMVQKRWEELVDSYLKKRRCLKGLVVVMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 +K++D+DV + + I+LTK DKLS A++TL + + I Y Sbjct: 126 LKEMDEDVIEWAVNYDIPIHILLTKSDKLSQNAAKKTLGEVQTAISAY 173 >gi|309388897|gb|ADO76777.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium praevalens DSM 2228] Length = 199 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/150 (45%), Positives = 90/150 (60%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + V + P+ PE+AFSGRSNVGKSSLIN + +K LARTSN PGRTQ LN+F Sbjct: 8 FYKSVYKYEDCPRLQQPEVAFSGRSNVGKSSLINRMTKQKKLARTSNTPGRTQCLNYFNV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYG+A P+K D W LI YL+ R L V +ID RH Sbjct: 68 DD---------KFYLVDLPGYGFANVPQKVKDDWAELIDTYLNYRENLVGVVQIIDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 + D+ + ++L +++ IV TK+DK+S Sbjct: 119 PTKDDKLMVNWLQASGLNFLIVATKVDKIS 148 >gi|222152936|ref|YP_002562113.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus uberis 0140J] gi|254783213|sp|B9DU74|ENGB_STRU0 RecName: Full=Probable GTP-binding protein EngB gi|222113749|emb|CAR41756.1| putative GTP-binding protein [Streptococcus uberis 0140J] Length = 199 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 80/188 (42%), Positives = 99/188 (52%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+ RKNLARTS PG+TQ LNFF D Sbjct: 25 PEDDIPEIALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFFNIDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH D ++ F Sbjct: 76 KIRFVDVPGYGYAKVSKVERARWGKMIEEYLTSRDNLRAVVSLVDLRHEPSTEDVQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K K N+ I SSV R GI+ Sbjct: 136 LKYYEIPVIVVATKADKIPRGKWNKHESMIKKKL---NFEQEDA-FILFSSVDRIGIDQA 191 Query: 203 RKAILETI 210 AILE I Sbjct: 192 WDAILEQI 199 >gi|52840380|ref|YP_094179.1| ribosome biogenesis GTP-binding protein YsxC [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148358283|ref|YP_001249490.1| GTP binding protein EngB [Legionella pneumophila str. Corby] gi|296105634|ref|YP_003617334.1| GTP binding protein EngB [Legionella pneumophila 2300/99 Alcoy] gi|81603580|sp|Q5ZZ86|ENGB_LEGPH RecName: Full=Probable GTP-binding protein EngB gi|166225963|sp|A5I9U4|ENGB_LEGPC RecName: Full=Probable GTP-binding protein EngB gi|52627491|gb|AAU26232.1| GTP binding protein EngB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148280056|gb|ABQ54144.1| GTP binding protein EngB [Legionella pneumophila str. Corby] gi|295647535|gb|ADG23382.1| GTP binding protein EngB [Legionella pneumophila 2300/99 Alcoy] Length = 200 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 104/193 (53%), Gaps = 16/193 (8%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ + LP+ E+AF+GRSN GKSS +N L N KNLARTS PGRTQ +N F Sbjct: 10 VFLKSAARVNQLPEDSGYEVAFAGRSNAGKSSALNCLTNNKNLARTSKTPGRTQLINLFS 69 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ + W + YL R LR + LL+D RH Sbjct: 70 LDE---------QRRLVDLPGYGYAKVAMEVKLEWQKNLAHYLEARQCLRGLILLMDVRH 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT- 191 +K +DQ + ++ + + I+LTK DKLS + + + K +R Y ++ Sbjct: 121 PLKDLDQILVNWALHRELPVHILLTKADKLSRSEVKNAVLK----VRQYYELAEHLVSVQ 176 Query: 192 --SSVKRKGIEVL 202 SSVK+ G+E L Sbjct: 177 AFSSVKKDGVEEL 189 >gi|323703639|ref|ZP_08115282.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum nigrificans DSM 574] gi|323531411|gb|EGB21307.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum nigrificans DSM 574] Length = 197 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 67/142 (47%), Positives = 88/142 (61%), Gaps = 9/142 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P PE+AF GRSNVGKSSLIN LVNR+ LA+TS+ PGRTQ +NFF + N Sbjct: 16 GGYPPEDLPEVAFVGRSNVGKSSLINKLVNRRGLAKTSSTPGRTQLINFF------KVNN 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYG+A+ P+ WG +I YL R +L+ V+ L+DCRH D+ + Sbjct: 70 RF---LLVDLPGYGFAKVPETVRAKWGQMIEGYLKNRESLKGVFQLVDCRHTPTVQDRQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLS 163 + +L V +V TK+DKLS Sbjct: 127 YEWLLHYQVPTVVVATKVDKLS 148 >gi|125973114|ref|YP_001037024.1| GTP-binding protein [Clostridium thermocellum ATCC 27405] gi|256003908|ref|ZP_05428894.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum DSM 2360] gi|281417306|ref|ZP_06248326.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium thermocellum JW20] gi|125713339|gb|ABN51831.1| GTP-binding protein [Clostridium thermocellum ATCC 27405] gi|255992036|gb|EEU02132.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum DSM 2360] gi|281408708|gb|EFB38966.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium thermocellum JW20] gi|316940660|gb|ADU74694.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium thermocellum DSM 1313] Length = 207 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 11/184 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEI F GRSNVGKSSLIN ++NRKNLA+ + PGRT+ +NF+ N+ + L Sbjct: 25 PKNDLPEITFVGRSNVGKSSLINTMLNRKNLAKVAATPGRTRVINFY------NIDDKL- 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYG+A+ PK W +I YL ER L+ V +L+D RH D + + Sbjct: 78 --YFVDLPGYGFAKVPKTMKTGWKDIIETYLIERKQLKKVIMLVDIRHSPTSDDVLMHEW 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L SY +V TK+DK+ T +E + + +++ ++IP SS R+G + L Sbjct: 136 LKAMRKSYVVVATKLDKIPRTKIKERISDIRSILKLEDDV--KIIPFSSETRQGRDELWD 193 Query: 205 AILE 208 IL+ Sbjct: 194 EILD 197 >gi|289422733|ref|ZP_06424573.1| ribosome biogenesis GTP-binding protein YsxC [Peptostreptococcus anaerobius 653-L] gi|289156912|gb|EFD05537.1| ribosome biogenesis GTP-binding protein YsxC [Peptostreptococcus anaerobius 653-L] Length = 259 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA +GRSNVGKSS+IN L++RKN ARTS+ PG+T+ +NF++ + Sbjct: 71 PGEGIPEIALAGRSNVGKSSVINGLLSRKNFARTSSTPGKTRTINFYLINE--------- 121 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K + WG ++ YLS+R L ++LL+DCRH D+ ++ + Sbjct: 122 EFYFVDLPGYGYAKVAKTEKEKWGAIMEMYLSDRRELCAIFLLVDCRHEPTADDKMMYEW 181 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVL 202 + + +V TK DK+S Q K +IR E +I TSS G++VL Sbjct: 182 IKHFGYNCVVVATKADKISRGQYQ----KHTSIIRKKLEMAKEDKIILTSSSSNVGMKVL 237 Query: 203 RKAILE 208 I++ Sbjct: 238 WDEIVD 243 >gi|260101783|ref|ZP_05752020.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus helveticus DSM 20075] gi|260084427|gb|EEW68547.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus helveticus DSM 20075] Length = 196 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/187 (41%), Positives = 106/187 (56%), Gaps = 12/187 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA SGRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTLNFYLIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYAR +K +G +I YL R L+ + +LID RH + D ++++ Sbjct: 70 EFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKDDIAMYNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIPTSSVKRKGIEVLR 203 + +V TKIDK+ + + + + K I NY + V+ SSV + + L Sbjct: 130 AQYLNLPILVVCTKIDKIKKSQVNKAMSRLKKNIDLNYD--YVTVLTFSSVTKLHVAELG 187 Query: 204 KAILETI 210 I E I Sbjct: 188 NWIEEKI 194 >gi|161507350|ref|YP_001577304.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus helveticus DPC 4571] gi|172048268|sp|A8YUS5|ENGB_LACH4 RecName: Full=Probable GTP-binding protein EngB gi|160348339|gb|ABX27013.1| GTP-binding protein [Lactobacillus helveticus DPC 4571] Length = 196 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/187 (41%), Positives = 106/187 (56%), Gaps = 12/187 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA SGRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTLNFYLIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYAR +K +G +I YL R L+ + +LID RH + D ++++ Sbjct: 70 EFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKDDIAMYNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIPTSSVKRKGIEVLR 203 + +V TKIDK+ + + + + K I NY + V+ SSV + + L Sbjct: 130 AQYLNLPILVVCTKIDKIKKSQVNKVMSRLKKNIDLNYD--YVTVLTFSSVTKLHVAELG 187 Query: 204 KAILETI 210 I E I Sbjct: 188 NWIEEKI 194 >gi|224585811|ref|YP_002639610.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254783207|sp|C0Q3G7|ENGB_SALPC RecName: Full=Probable GTP-binding protein EngB gi|224470339|gb|ACN48169.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 210 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRRSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|308274309|emb|CBX30908.1| Probable GTP-binding protein engB [uncultured Desulfobacterium sp.] Length = 202 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/152 (43%), Positives = 91/152 (59%), Gaps = 9/152 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P+ PEIAF+GRSNVGKSSLIN L+NRKNL +TS+ PGRTQ +NFF+ Sbjct: 8 FVKSAVKPSQYPEESQPEIAFAGRSNVGKSSLINTLLNRKNLVKTSSTPGRTQLINFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYGYA+ P +WG +I Y+ R TL+ V L++D R Sbjct: 68 ND---------TLGFVDIPGYGYAKVPAAVRKTWGTMIETYIQTRKTLKGVVLILDLRRI 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 + +L+ + + +VLTK DKLS T Sbjct: 119 PGPEEITFMDWLNYYNIPFILVLTKADKLSKT 150 >gi|28378737|ref|NP_785629.1| GTPase EngB [Lactobacillus plantarum WCFS1] gi|254556940|ref|YP_003063357.1| GTPase EngB [Lactobacillus plantarum JDM1] gi|300768255|ref|ZP_07078160.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180929|ref|YP_003925057.1| GTPase EngB [Lactobacillus plantarum subsp. plantarum ST-III] gi|38257507|sp|Q88VE3|ENGB_LACPL RecName: Full=Probable GTP-binding protein EngB gi|28271574|emb|CAD64479.1| GTP-binding protein [Lactobacillus plantarum WCFS1] gi|254045867|gb|ACT62660.1| GTPase EngB [Lactobacillus plantarum JDM1] gi|300494319|gb|EFK29482.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046420|gb|ADN98963.1| GTPase EngB [Lactobacillus plantarum subsp. plantarum ST-III] Length = 197 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 62/138 (44%), Positives = 86/138 (62%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEI +GRSNVGKSSLIN+L+NR + ARTS+ PG+TQ LNF+ +D Sbjct: 19 PTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQTLNFYKVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + WG +I YL+ R TLR V +L+D RH + D ++ + Sbjct: 70 QLYFVDVPGYGYAKVSKKEREKWGQMIETYLTSRETLRGVVILVDARHAPTKDDVAMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 + + +V TK DK+ Sbjct: 130 MRYYEMPLLVVATKSDKI 147 >gi|257884403|ref|ZP_05664056.1| GTP-binding protein [Enterococcus faecium 1,231,501] gi|257820241|gb|EEV47389.1| GTP-binding protein [Enterococcus faecium 1,231,501] Length = 195 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/138 (46%), Positives = 84/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L++RKNLARTS PG+TQ LNF++ ++ Sbjct: 19 PETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQTLNFYLIEN--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Q D ++ F Sbjct: 70 ALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQEDIQMYQF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TK DK+ Sbjct: 130 LKYYDIPVIVVATKADKI 147 >gi|295425158|ref|ZP_06817863.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus amylolyticus DSM 11664] gi|295065217|gb|EFG56120.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus amylolyticus DSM 11664] Length = 196 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/139 (48%), Positives = 88/139 (63%), Gaps = 11/139 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 PK PEIA +GRSNVGKSSLIN LVNRKNLARTS+ PG+TQ LNF+ V K F Sbjct: 19 PKDDLPEIALAGRSNVGKSSLINTLVNRKNLARTSSQPGKTQTLNFYLVNKSF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ +K +G +I YL R+ L+ + +L+D RH + DQ ++ Sbjct: 72 ---YLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRANLKGLIILVDSRHVPSKDDQSMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKL 162 + + +V TKIDKL Sbjct: 129 YAQYLNLPILVVCTKIDKL 147 >gi|150008077|ref|YP_001302820.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides distasonis ATCC 8503] gi|255014915|ref|ZP_05287041.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_7] gi|256840744|ref|ZP_05546252.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp. D13] gi|262381349|ref|ZP_06074487.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_33B] gi|298376570|ref|ZP_06986525.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_19] gi|166225966|sp|A6LBY4|ENGB_PARD8 RecName: Full=Probable GTP-binding protein EngB gi|149936501|gb|ABR43198.1| GTP-binding protein [Parabacteroides distasonis ATCC 8503] gi|256738016|gb|EEU51342.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp. D13] gi|262296526|gb|EEY84456.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_33B] gi|298266448|gb|EFI08106.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_19] Length = 200 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 75/187 (40%), Positives = 109/187 (58%), Gaps = 15/187 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE AF GRSNVGKSSLIN+L N+K LA TS PG+T +N F L NN Sbjct: 19 PEGNKPEYAFIGRSNVGKSSLINMLTNKKGLAMTSQTPGKTLLINHF-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYG+A+ K+N + +I Y+ +R L +++L+DCRH ++ID + + Sbjct: 70 EWYLVDLPGYGFAQRGKENREQLKRIIENYILDREQLTNLFVLLDCRHEAQKIDLEFMEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLE-KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + V + I+ TKIDK+S +E L+ T L+ + P + +SS K++G R Sbjct: 130 LGESGVPFSIIFTKIDKISKGRLKENLKVYTDKLLETWEELPP-IFLSSSEKKEG----R 184 Query: 204 KAILETI 210 IL+ I Sbjct: 185 DEILDYI 191 >gi|227551677|ref|ZP_03981726.1| GTPase [Enterococcus faecium TX1330] gi|257895723|ref|ZP_05675376.1| GTP-binding protein [Enterococcus faecium Com12] gi|293377668|ref|ZP_06623857.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium PC4.1] gi|293571861|ref|ZP_06682877.1| GTP-binding protein [Enterococcus faecium E980] gi|227179240|gb|EEI60212.1| GTPase [Enterococcus faecium TX1330] gi|257832288|gb|EEV58709.1| GTP-binding protein [Enterococcus faecium Com12] gi|291608115|gb|EFF37421.1| GTP-binding protein [Enterococcus faecium E980] gi|292643668|gb|EFF61789.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium PC4.1] Length = 195 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/138 (46%), Positives = 84/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L++RKNLARTS PG+TQ LNF++ ++ Sbjct: 19 PETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQTLNFYLIEN--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Q D ++ F Sbjct: 70 ALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQEDIQMYQF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TK DK+ Sbjct: 130 LKYYDIPVIVVATKADKI 147 >gi|157964167|ref|YP_001498991.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia massiliae MTU5] gi|157843943|gb|ABV84444.1| Hypothetical GTP-binding protein [Rickettsia massiliae MTU5] Length = 213 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/150 (44%), Positives = 86/150 (57%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I + PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ +NFF Sbjct: 25 FVAGAMNINQILNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFNL 84 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + WG LI YL LR V LLID R G Sbjct: 85 AD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRG 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K+ D+ V L +QI+ TK DK++ Sbjct: 136 IKENDKKVADLLLANKREFQIIFTKSDKVT 165 >gi|118602244|ref|YP_903459.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166225977|sp|A1AVN1|ENGB_RUTMC RecName: Full=Probable GTP-binding protein EngB gi|118567183|gb|ABL01988.1| cell division checkpoint GTPase YihA [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 199 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 102/190 (53%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 FL P + P E+ F+GRSN GKSS+IN L + LA+ S PG+TQH FF + Sbjct: 10 FLLSCPSLKGCPPDEGYEVIFAGRSNAGKSSVINTLTLQNKLAKVSRTPGKTQHFVFFEL 69 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 KD LVD+PGYGYA+ PK+ W I Y ++R LR L++D RH Sbjct: 70 DKD----------RRLVDLPGYGYAKVPKRVKTKWHKDINEYFNKRDCLRGTVLVMDIRH 119 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 K DQ V ++ +S QI+LTK DKL A T K I+ YP ++ S Sbjct: 120 PFKLFDQMVLNWCHSINLSTQIILTKSDKLKKGAASNTYLKVHNQIKKYPYVDVQLF--S 177 Query: 193 SVKRKGIEVL 202 S+K++G+E+L Sbjct: 178 SLKKQGLEIL 187 >gi|139438420|ref|ZP_01771936.1| Hypothetical protein COLAER_00926 [Collinsella aerofaciens ATCC 25986] gi|133775959|gb|EBA39779.1| Hypothetical protein COLAER_00926 [Collinsella aerofaciens ATCC 25986] Length = 196 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ +P++ PE++F GRSNVGKSS++N L RKNL + S+ PG+T ++NFF Sbjct: 12 FVASYGKVSQIPESTCPEVSFVGRSNVGKSSIMNKLFGRKNLVKVSSTPGKTSNINFFEA 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYG+AR K D W LI + + V L+D RH Sbjct: 72 DD----------VHFVDLPGYGFARRSKAERDRWAELIGDFFDSERSFNLVVSLVDIRHD 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++D D+ +L ++ + LTK DKLS T K + N P + VI TSS Sbjct: 122 PSKLDHDMIDYLQGNEFNFIVCLTKADKLSRTQQARQAAAIKKQL-NVPAEN--VIITSS 178 Query: 194 VKRKGIEVLRKAILET 209 GI+ L+K I E Sbjct: 179 QTGTGIDELKKRIAEA 194 >gi|257898294|ref|ZP_05677947.1| GTP-binding protein [Enterococcus faecium Com15] gi|293557137|ref|ZP_06675691.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium E1039] gi|294614148|ref|ZP_06694069.1| GTP-binding protein [Enterococcus faecium E1636] gi|257836206|gb|EEV61280.1| GTP-binding protein [Enterococcus faecium Com15] gi|291592998|gb|EFF24586.1| GTP-binding protein [Enterococcus faecium E1636] gi|291600706|gb|EFF31004.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium E1039] Length = 195 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/138 (46%), Positives = 84/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L++RKNLARTS PG+TQ LNF++ ++ Sbjct: 19 PETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQTLNFYLIEN--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Q D ++ F Sbjct: 70 ALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQEDIQMYQF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TK DK+ Sbjct: 130 LKYYDIPVIVVATKADKI 147 >gi|313906309|ref|ZP_07839652.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium cellulosolvens 6] gi|313468865|gb|EFR64224.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium cellulosolvens 6] Length = 196 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 72/180 (40%), Positives = 107/180 (59%), Gaps = 17/180 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNN 82 LP G EIAF+G+SNVGKSSLIN L+NRK+LARTS+ PG+TQ +NF+ + ++F Sbjct: 18 LPDTGQAEIAFAGKSNVGKSSLINGLMNRKSLARTSSQPGKTQTINFYHINEEF------ 71 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 LVD+PGYGY A SWG +I RYL + L+ V+LL+D RH D+ ++ Sbjct: 72 ----YLVDLPGYGYTTASVNVRQSWGRMIERYLKTATNLKAVFLLLDIRHAPNANDKQMY 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIE 200 ++ + ++ TK+DK+ + Q+ L+ L+R+ ++ P SSV + G E Sbjct: 128 DWVLDNGYTPIVIATKLDKIKRSQVQKQLK----LLRDTLGMEKGAKLFPYSSVTKAGRE 183 >gi|71897603|ref|ZP_00679848.1| GTP-binding protein [Xylella fastidiosa Ann-1] gi|71732506|gb|EAO34559.1| GTP-binding protein [Xylella fastidiosa Ann-1] Length = 219 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 101/193 (52%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L I LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 26 YLLSAHTIHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTV 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P LVD+PGYGYA+ PK+ W I Y R +LR + +++D RH Sbjct: 86 T---------PQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHP 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D + ++ ++ + Q +LTK DKL +TL+K + + + H + SS Sbjct: 137 LKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSS 196 Query: 194 VKRKGIEVLRKAI 206 R+G+E L I Sbjct: 197 KSRQGVEQLHTVI 209 >gi|281425242|ref|ZP_06256155.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris F0302] gi|299142639|ref|ZP_07035769.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris C735] gi|281400708|gb|EFB31539.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris F0302] gi|298575854|gb|EFI47730.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris C735] Length = 198 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/198 (39%), Positives = 109/198 (55%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P + PK PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FVISAPTVSKCPKDDKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NN LVD+PGYG+A+ K +I Y+ +R L V++LID RH Sbjct: 68 -------NN--EWYLVDLPGYGFAKRSKTVQQKLEQMIASYILQRKQLINVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + V + IV TK DKL P A++ +K +++ P TSS Sbjct: 119 QQKIDREFIDWLGESNVPFTIVFTKADKLGPGKAKQNAQKWLEQLKDRWETLPPYYITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 K+ G E L A ++ IN Sbjct: 179 EKKLGREELL-AYIDEIN 195 >gi|29655060|ref|NP_820752.1| ribosome biogenesis GTP-binding protein YsxC [Coxiella burnetii RSA 493] gi|81628492|sp|Q83AV6|ENGB_COXBU RecName: Full=Probable GTP-binding protein EngB gi|29542329|gb|AAO91266.1| GTP-binding protein [Coxiella burnetii RSA 493] Length = 205 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 93/168 (55%), Gaps = 9/168 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L E LP EIAF GRSN GKSS +NI+ K LARTS PGRTQ +NFF Sbjct: 15 YLTSAAEFDQLPPDQGAEIAFIGRSNAGKSSALNIITGIKGLARTSKTPGRTQMINFFAL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYGYA+ P+ W L+ YL R L+ + +++D RH Sbjct: 75 NEHERL---------VDLPGYGYAKVPRMVQKRWEELVDSYLKNRRCLKGLVVVMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 +K++D+DV + + I+LTK DKLS A++TL + + I Y Sbjct: 126 LKEMDEDVIEWAVNYDIPIHILLTKSDKLSQNAAKKTLGEVQTAISAY 173 >gi|251793793|ref|YP_003008523.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter aphrophilus NJ8700] gi|247535190|gb|ACS98436.1| GTP-binding protein [Aggregatibacter aphrophilus NJ8700] Length = 204 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPNLKSLPEDSGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PQCKLVDLPGYGYAAVPEQMKQQWQHALGEYLQKRECLAGIIVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 124 LKDLDQQMIEWAVSADLPILLLLTKADKLSQSERSKQVKMVREAILPF-QGDIQVEAFSA 182 Query: 194 VKRKGIEVL 202 +KR GI+ L Sbjct: 183 LKRTGIDRL 191 >gi|294673629|ref|YP_003574245.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella ruminicola 23] gi|294471615|gb|ADE81004.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella ruminicola 23] Length = 200 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/197 (38%), Positives = 107/197 (54%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + PK PE AF GRSNVGKSSLIN+L +KNLA+TS PG+T +N F+ Sbjct: 8 FTLSAPMESMCPKDTKPEYAFIGRSNVGKSSLINMLTGKKNLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NN LVD+PGYG+A+ KK V +I Y+ +R L V+LLID R Sbjct: 68 -------NN--EWYLVDLPGYGFAKRSKKEVQKLEQMINGYILQREQLVNVFLLIDIRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + ++ +V + I+ TK DKLS + + L K ++ P + TSS Sbjct: 119 AQKIDLEFMEWMGTSSVPFAIIFTKADKLSASKVLQNLNAYKKVLSETWEELPPIFVTSS 178 Query: 194 VKRKGIEVLRKAILETI 210 K++G R +L+ I Sbjct: 179 EKKQG----RDEVLDYI 191 >gi|145300976|ref|YP_001143817.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas salmonicida subsp. salmonicida A449] gi|166225938|sp|A4ST47|ENGB_AERS4 RecName: Full=Probable GTP-binding protein EngB gi|142853748|gb|ABO92069.1| GTP binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 217 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 103/194 (53%), Gaps = 12/194 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP G EIAF+GRSN GKSS +N L KNLARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINLFEL 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA+ P + W + YL R +L+ + +L+D RH Sbjct: 73 E---------PGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTS 192 +K D ++ + + + ++LTK DKLSP + K + I + P E S Sbjct: 124 LKDTDMNMLEWSSHRELPVMLLLTKADKLSPGPRNNQVIKVRQAIADLGPQIQVEAF--S 181 Query: 193 SVKRKGIEVLRKAI 206 S+ G+E L + + Sbjct: 182 SLNNIGVEKLAQTL 195 >gi|161830201|ref|YP_001597597.1| ribosome biogenesis GTP-binding protein YsxC [Coxiella burnetii RSA 331] gi|189037176|sp|A9NAD8|ENGB_COXBR RecName: Full=Probable GTP-binding protein EngB gi|161762068|gb|ABX77710.1| GTP-binding protein [Coxiella burnetii RSA 331] Length = 205 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 93/168 (55%), Gaps = 9/168 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L E LP EIAF GRSN GKSS +NI+ K LARTS PGRTQ +NFF Sbjct: 15 YLTSAAEFDQLPPDQGAEIAFIGRSNAGKSSALNIITGIKGLARTSKTPGRTQMINFFAL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYGYA+ P+ W L+ YL R L+ + +++D RH Sbjct: 75 NEHERL---------VDLPGYGYAKVPRMVQKRWEELVDSYLKNRRCLKGLVVVMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 +K++D+DV + + I+LTK DKLS A++TL + + I Y Sbjct: 126 LKEMDEDVIEWAVNYDIPIHILLTKSDKLSQNAAKKTLGEVQTAISAY 173 >gi|257887187|ref|ZP_05666840.1| GTP-binding protein [Enterococcus faecium 1,141,733] gi|257823241|gb|EEV50173.1| GTP-binding protein [Enterococcus faecium 1,141,733] Length = 195 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 64/138 (46%), Positives = 84/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L++RKNLARTS PG+TQ LNF++ ++ Sbjct: 19 PETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQTLNFYLIEN--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Q D ++ F Sbjct: 70 ALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKPSQEDIQMYQF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TK DK+ Sbjct: 130 LKYYDIPVIVVATKADKI 147 >gi|323466766|gb|ADX70453.1| Probable GTP-binding protein engB [Lactobacillus helveticus H10] Length = 196 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 78/187 (41%), Positives = 105/187 (56%), Gaps = 12/187 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK EIA SGRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PKDNLSEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTLNFYLIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYAR +K +G +I YL R L+ + +LID RH + D ++++ Sbjct: 70 EFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKDDIAMYNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIPTSSVKRKGIEVLR 203 + +V TKIDK+ + + + + K I NY H V+ SSV + + L Sbjct: 130 AQYLNLPILVVCTKIDKIKKSQVNKVMSRLKKNIDLNYD--HVTVLTFSSVTKLHVAELG 187 Query: 204 KAILETI 210 I E I Sbjct: 188 NWIEEKI 194 >gi|306821418|ref|ZP_07455023.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550540|gb|EFM38526.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 195 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 101/178 (56%), Gaps = 11/178 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P IA +GRSNVGKSSLIN L+NRK+LAR S PG+T+ +NFF+ + Sbjct: 19 PDDNLPCIALAGRSNVGKSSLINSLLNRKSLARVSGTPGKTRTINFFIINE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K +SWG + Y S+ L+ V+LL+D RH K D+ ++ + Sbjct: 70 SFYLVDLPGYGYAKLSKTEQESWGKTMELYFSKSKNLKHVFLLLDIRHEPKASDKQMYDY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + I+ TK DK+S Q++ K ++ ++ P SS+ + GIE L Sbjct: 130 CKYYDIPVDIIATKSDKISRGAYQKSFSIMKKFLQ--IKEEIKIFPISSLNKSGIEEL 185 >gi|296135140|ref|YP_003642382.1| ribosome biogenesis GTP-binding protein YsxC [Thiomonas intermedia K12] gi|295795262|gb|ADG30052.1| ribosome biogenesis GTP-binding protein YsxC [Thiomonas intermedia K12] Length = 230 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 97/184 (52%), Gaps = 14/184 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--PKDFSNLKN 81 LP G PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+NFF PKD Sbjct: 17 LPVTGLPEIAFVGRSNAGKSTAINTLCQQRQLAFASKTPGRTQHINFFAVGPKDS----- 71 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 P+ LVD+PGYGYA K + W + +YL+ER L + LL D R G+ + D + Sbjct: 72 --PSGLLVDLPGYGYAAVAKTDKKRWQLFLAQYLAERGPLVGLILLADSRLGLTETDLSL 129 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-----SSVKR 196 +F+ +V ++LTK DKL+ Q + + + + A P S+ K Sbjct: 130 LAFMAPASVPLHVLLTKADKLNRQEGQRAAQAARDQLAQHAQAVGMTAPISLQLFSATKL 189 Query: 197 KGIE 200 G+E Sbjct: 190 SGVE 193 >gi|228473700|ref|ZP_04058448.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga gingivalis ATCC 33624] gi|228274847|gb|EEK13664.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga gingivalis ATCC 33624] Length = 200 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 108/199 (54%), Gaps = 12/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFV 72 F+ ++ P PE AF GRSNVGKSSLIN+L N K LA+TS+ PG+TQ +N F + Sbjct: 8 FVVSNTQVAKCPTHKLPEYAFIGRSNVGKSSLINMLTNHKGLAKTSSKPGKTQLINHFLI 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K++ LVD+PGYGYA+ K++ ++ I Y +R L ++L+D RH Sbjct: 68 NKEW----------YLVDLPGYGYAKVSKQSKKTFQQFITDYFKKRRELVNAFVLVDIRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++ID + +L + A+ + IV TK DKL+ QE + ++ P TS Sbjct: 118 EPQKIDLEFMQWLGENAIPFAIVFTKADKLTEKQIQEHVTSYSEILLQQWEEMPPYFITS 177 Query: 193 SVKRKGIEVLRKAILETIN 211 S R G E L I ETIN Sbjct: 178 SENRLGKEDLLSYI-ETIN 195 >gi|225028674|ref|ZP_03717866.1| hypothetical protein EUBHAL_02953 [Eubacterium hallii DSM 3353] gi|224953984|gb|EEG35193.1| hypothetical protein EUBHAL_02953 [Eubacterium hallii DSM 3353] Length = 197 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 67/139 (48%), Positives = 85/139 (61%), Gaps = 9/139 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LPK PE+AF+G+SNVGKSSLIN LVNRK+LARTS PG+TQ +NF+ N Sbjct: 18 LPKNTLPEVAFAGKSNVGKSSLINALVNRKSLARTSGQPGKTQTINFY---------NVN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 M +VD+PGYGYA+ K+ WG +I YL LR V+LLID RH D ++ Sbjct: 69 EEMYIVDLPGYGYAKVSKEVAAKWGPMIENYLHTSEQLRMVFLLIDLRHKPTNNDVQMYR 128 Query: 144 FLDKKAVSYQIVLTKIDKL 162 ++ S IV TK DK+ Sbjct: 129 WILSNGFSPVIVATKADKI 147 >gi|168821667|ref|ZP_02833667.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443397|ref|YP_002043224.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|198244514|ref|YP_002217923.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|238690342|sp|B5FNZ2|ENGB_SALDC RecName: Full=Probable GTP-binding protein EngB gi|238693565|sp|B4SZ98|ENGB_SALNS RecName: Full=Probable GTP-binding protein EngB gi|194402060|gb|ACF62282.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197939030|gb|ACH76363.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205341881|gb|EDZ28645.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088406|emb|CBY98165.1| probable GTP-binding protein engB [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326625712|gb|EGE32057.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629545|gb|EGE35888.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 210 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLF-- 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 69 -------EVVEGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|283787469|ref|YP_003367334.1| GTP-binding protein [Citrobacter rodentium ICC168] gi|282950923|emb|CBG90600.1| probable GTP-binding protein [Citrobacter rodentium ICC168] Length = 198 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F D Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEVVD-- 60 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 61 -------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 113 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + + + ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 114 DQQMILWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSSLKKQ 172 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 173 GVDKLRQKL 181 >gi|24418386|sp|Q92JC9|ENGB_RICCN RecName: Full=Probable GTP-binding protein EngB Length = 212 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 67/150 (44%), Positives = 86/150 (57%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I + PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ +NFF Sbjct: 24 FVAGAMNINQILNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFNL 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + WG LI YL LR V LLID R G Sbjct: 84 AD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRG 134 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K+ D+ V L +QI+ TK DK++ Sbjct: 135 IKENDKKVADLLLANKREFQIIFTKSDKVT 164 >gi|294339191|emb|CAZ87545.1| putative GTP-binding protein engB [Thiomonas sp. 3As] Length = 230 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 99/190 (52%), Gaps = 14/190 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--PKDFSNLKN 81 LP G PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+NFF PKD Sbjct: 17 LPVTGLPEIAFVGRSNAGKSTAINTLCQQRQLAFASKTPGRTQHINFFAVGPKDS----- 71 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 P+ LVD+PGYGYA K + W + +YL+ER L + LL D R G+ + D + Sbjct: 72 --PSGLLVDLPGYGYAAVAKTDKKRWQLFLAQYLAERGPLVGLILLADSRLGLTETDLSL 129 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-----SSVKR 196 +F+ +V ++LTK DKL+ Q + + + + A P S+ K Sbjct: 130 LAFMAPASVPLHVLLTKADKLNRQEGQRAAQAARDQLAQHAQAVGMTAPISLQLFSATKL 189 Query: 197 KGIEVLRKAI 206 G+E + I Sbjct: 190 SGVESASQLI 199 >gi|237727973|ref|ZP_04558454.1| GTPase EngB [Citrobacter sp. 30_2] gi|226910230|gb|EEH96148.1| GTPase EngB [Citrobacter sp. 30_2] Length = 210 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VD---------GKRLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + V ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMILWAVESNVQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 181 LKKLGVDKLRQKL 193 >gi|94312216|ref|YP_585426.1| ribosome biogenesis GTP-binding protein YsxC [Cupriavidus metallidurans CH34] gi|93356068|gb|ABF10157.1| GTP-binding protein [Cupriavidus metallidurans CH34] gi|222833714|gb|EEE72191.1| predicted protein [Populus trichocarpa] Length = 250 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 10/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+NFF Sbjct: 32 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSRTPGRTQHINFFT- 90 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +K P LVD+PGYGYA W GL+ Y+ R+ L + L++D R Sbjct: 91 --VAPVKAPDPVGFLVDLPGYGYAEVSGSAKFHWQGLLSDYVQARTQLSGLILMMDARRP 148 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 +D + + ++LTK DKL+ + + L +T+ ++ +Y A E P Sbjct: 149 FTDLDCQMVEWFLPTGKPIHVLLTKADKLTTSDNAKALRETRKVLADY-AAQMENPPALT 207 Query: 192 ----SSVKRKGIEVLRKAI 206 SS+KR+GIE ++ + Sbjct: 208 AQLFSSLKRRGIEEAQRVV 226 >gi|328468551|gb|EGF39553.1| GTP-binding protein YsxC [Lactobacillus helveticus MTCC 5463] Length = 194 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 67/151 (44%), Positives = 91/151 (60%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA SGRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTLNFYLIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYAR +K +G +I YL R L+ + +LID RH + D ++++ Sbjct: 70 EFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTKDDIAMYNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + +V TKIDK+ + + + + K Sbjct: 130 AQYLNLPILVVCTKIDKIKKSQVNKAMSRLK 160 >gi|255505868|ref|ZP_05348579.3| ribosome biogenesis GTP-binding protein YsxC [Bryantella formatexigens DSM 14469] gi|255265477|gb|EET58682.1| ribosome biogenesis GTP-binding protein YsxC [Bryantella formatexigens DSM 14469] Length = 258 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 16/188 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ N+ N Sbjct: 71 LPVNDKIEVAFAGKSNVGKSSLINALMNRKALARTSAQPGKTQTINFY------NINN-- 122 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 AM LVD+PGYGYA+ + + WG +I RYL + L+ V+LLID RH D+ ++ Sbjct: 123 -AMYLVDLPGYGYAKVAQSEKEKWGRMIERYLQKSQMLKAVFLLIDIRHDPSANDKLMYD 181 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ I+ TK+DK+ + Q ++ K + VIP S+ ++G R Sbjct: 182 WILYNGYEPIIIATKLDKIKRSQVQ---KQVKAVREGLGMKGGTVIPFSAETKQG----R 234 Query: 204 KAILETIN 211 I E I+ Sbjct: 235 DEIWEMID 242 >gi|28198564|ref|NP_778878.1| GTPase EngB [Xylella fastidiosa Temecula1] gi|32129522|sp|Q87DM6|ENGB_XYLFT RecName: Full=Probable GTP-binding protein EngB gi|28056648|gb|AAO28527.1| GTP-binding protein [Xylella fastidiosa Temecula1] gi|307579692|gb|ADN63661.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa subsp. fastidiosa GB514] Length = 203 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 20 LPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTVT--------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ PK+ W I Y R +LR + +++D RH +K+ D + + Sbjct: 71 PQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQMLA 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + Q +LTK DKL +TL+K + + + H + SS R+G+E L Sbjct: 131 YARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQLH 190 Query: 204 KAI 206 I Sbjct: 191 TVI 193 >gi|119369240|sp|Q1LI69|ENGB_RALME RecName: Full=Probable GTP-binding protein EngB Length = 227 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 10/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+NFF Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSRTPGRTQHINFFT- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +K P LVD+PGYGYA W GL+ Y+ R+ L + L++D R Sbjct: 68 --VAPVKAPDPVGFLVDLPGYGYAEVSGSAKFHWQGLLSDYVQARTQLSGLILMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 +D + + ++LTK DKL+ + + L +T+ ++ +Y A E P Sbjct: 126 FTDLDCQMVEWFLPTGKPIHVLLTKADKLTTSDNAKALRETRKVLADY-AAQMENPPALT 184 Query: 192 ----SSVKRKGIEVLRKAI 206 SS+KR+GIE ++ + Sbjct: 185 AQLFSSLKRRGIEEAQRVV 203 >gi|307256115|ref|ZP_07537902.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865296|gb|EFM97192.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 206 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 105/189 (55%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L V +L+D RH Sbjct: 71 E---------PNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLHGVVILMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + +T++ + I + +V S+ Sbjct: 122 LKDLDQQMIEWAVSAQLPVLLLLTKADKLSQSARSKTVKMVREAILPF-QGDIQVEAYSA 180 Query: 194 VKRKGIEVL 202 + + GI+ L Sbjct: 181 LNKVGIDKL 189 >gi|148266199|ref|YP_001232905.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter uraniireducens Rf4] gi|189037180|sp|A5G964|ENGB_GEOUR RecName: Full=Probable GTP-binding protein EngB gi|146399699|gb|ABQ28332.1| small GTP-binding protein [Geobacter uraniireducens Rf4] Length = 204 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/151 (47%), Positives = 92/151 (60%), Gaps = 11/151 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F++ P PEIAF+GRSNVGKSSLIN+LVNRK+L RTS+ PGRTQ +NFF V Sbjct: 8 FIKSATRPAHYPAGDFPEIAFAGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFDV 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +F+ LVD+PGYG+AR P WG ++ YLS+RS LR V L++D R Sbjct: 68 NGEFT----------LVDLPGYGFARVPLAVKKEWGPMMETYLSKRSNLRGVILILDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 D + +L +V IV+TK DK+S Sbjct: 118 TPVAEDVQMLHWLRAYSVKPIIVVTKCDKVS 148 >gi|168056123|ref|XP_001780071.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668474|gb|EDQ55080.1| predicted protein [Physcomitrella patens subsp. patens] Length = 305 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 80/191 (41%), Positives = 108/191 (56%), Gaps = 23/191 (12%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSNVGKSSLIN L + + RTS+ PG TQ +NFF L + L Sbjct: 121 LPSLNLPEIAFAGRSNVGKSSLINALTRQWGVVRTSDKPGMTQSVNFFT------LGSRL 174 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYG+A A ++ ++W L+ Y++ R L+ V LL+D + G+K D+++ Sbjct: 175 ---CLVDLPGYGFAYAKEEAKEAWEDLVKEYVTTRKILKRVCLLVDSKWGLKPRDEELIE 231 Query: 144 FLDKKAVSYQIVLTKIDKLSP-------TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 ++ YQIVLTK D L P T QE L+ K LI P V+ SS Sbjct: 232 LMENAQTKYQIVLTKTDILPPLDLARRATQIQEALKHHKQLI--LP-----VLMVSSQTG 284 Query: 197 KGIEVLRKAIL 207 GI LRKA++ Sbjct: 285 GGIPHLRKALV 295 >gi|300727729|ref|ZP_07061115.1| GTP-binding protein [Prevotella bryantii B14] gi|299775017|gb|EFI71623.1| GTP-binding protein [Prevotella bryantii B14] Length = 200 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 74/187 (39%), Positives = 101/187 (54%), Gaps = 9/187 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + PK PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTISAPTVSKCPKDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NN LVD+PGYG+A+ K +I Y+ +R L V++LID RH Sbjct: 68 -------NN--EWYLVDLPGYGFAKRSKSVQQKLEQMISSYILQRQQLYNVFVLIDVRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L K + + IV TK DKL P A++ E +++ P TSS Sbjct: 119 QQKIDREFVDWLGKSQIPFAIVFTKADKLGPVKAKKNAEAWMKQLQDTWEDLPPYFITSS 178 Query: 194 VKRKGIE 200 K+ G E Sbjct: 179 EKKLGKE 185 >gi|116621147|ref|YP_823303.1| small GTP-binding protein [Candidatus Solibacter usitatus Ellin6076] gi|122254883|sp|Q026Q1|ENGB_SOLUE RecName: Full=Probable GTP-binding protein EngB gi|116224309|gb|ABJ83018.1| small GTP-binding protein [Candidatus Solibacter usitatus Ellin6076] Length = 191 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 107/204 (52%), Gaps = 20/204 (9%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K+ ++ G P+ P PEIAF GRSNVGKSSLIN L K LA TSN PGRTQ + Sbjct: 5 KAEFVVSSGKPDT--FPSDRLPEIAFLGRSNVGKSSLINALTGHKKLAFTSNTPGRTQTI 62 Query: 69 NFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 NF+ V + F LVD+PGYGYAR P + W LI YL R TL+ L+ Sbjct: 63 NFYRVDEKF----------YLVDLPGYGYARVPAGFAEQWKVLIEHYLEFRETLKFSCLI 112 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +D R G + D D+ +LD Y +V TK DKL+ + + L R E Sbjct: 113 LDTRRGWMEKDLDLKRWLDHHGRPYLVVATKTDKLNQSEQERGL-------RAIRQEGVE 165 Query: 188 VIPTSSVKRKGIEVLRKAILETIN 211 +P S++ +G+ + +AI T+ Sbjct: 166 PLPFSALSGRGVREIWQAITTTLQ 189 >gi|291536691|emb|CBL09803.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Roseburia intestinalis M50/1] gi|291537975|emb|CBL11086.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Roseburia intestinalis XB6B4] Length = 199 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 11/183 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P E+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ D Sbjct: 18 VPDTAYAEVAFAGKSNVGKSSLINALMNRKALARTSAQPGKTQTINFYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 AM LVD+PGYGYA+A ++ WG +I YL L+ V+LLID RH D+ ++ Sbjct: 70 -AMYLVDLPGYGYAKASEEVKAKWGKMIENYLHTSKQLKAVFLLIDIRHDPSANDRMMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + + I+ TK+DK+ + Q+ ++ + + P +IP S+ ++G + + Sbjct: 129 WMVYQGFAPIIIATKLDKIKRSQIQKNVKAIREGLNVQPGT--TIIPFSAETKQGRDEIW 186 Query: 204 KAI 206 K I Sbjct: 187 KLI 189 >gi|325954327|ref|YP_004237987.1| GTP-binding protein engB [Weeksella virosa DSM 16922] gi|323436945|gb|ADX67409.1| GTP-binding protein engB [Weeksella virosa DSM 16922] Length = 205 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 75/198 (37%), Positives = 106/198 (53%), Gaps = 13/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ PK PE AF GRSNVGKSSLIN+L N+++LA+TS PG+TQ LN F+ Sbjct: 8 FIKSAQTYKDCPKPDLPEYAFIGRSNVGKSSLINMLTNKRDLAKTSGTPGKTQLLNTFL- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +N L D+PGYGYA+ K N + +I YL R+ L C ++L+D RH Sbjct: 67 -----INSN---WYLTDLPGYGYAKVSKTNRAGFERMIYDYLEFRTNLVCTFVLVDSRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D +L K + + I+ TK+DKLS Q+ L K + P + TSS Sbjct: 119 PQKNDLKFMEWLGHKQIPFAIIFTKLDKLSSAKFQKNLNTYKRELLKTWEDLPMIFATSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 G R +L+ IN Sbjct: 179 SSFIG----RNELLDYIN 192 >gi|13124224|sp|Q9PDE9|ENGB_XYLFA RecName: Full=Probable GTP-binding protein EngB Length = 203 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 20 LPADDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTVT--------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ PK+ W I Y +R LR + +++D RH +K+ D + + Sbjct: 71 PQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHPLKEYDLQMLA 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + Q +LTK DKL +TL+K + + + H + SS R+G+E L Sbjct: 131 YARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQLH 190 Query: 204 KAI 206 I Sbjct: 191 TVI 193 >gi|312868996|ref|ZP_07729173.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus oris PB013-T2-3] gi|311095422|gb|EFQ53689.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus oris PB013-T2-3] Length = 196 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE+A GRSNVGKSSL N+L+NR+N A TS+ PG+TQ LNF+ +D Sbjct: 19 PKTNYPEVALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYAVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + +G +I +YL++R LR LL+D RH D ++ + Sbjct: 70 QLYFVDVPGYGYAKVSKKERERFGQMIEQYLTQRDQLRGAILLVDGRHAPTADDVSMYQW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TKIDK+ T QE+L K + A +++ S+V + G + + Sbjct: 130 LQYYHIPTLVVATKIDKVKGNTWNRQESLIKKTLGL----AAGDQLVLFSAVNKTGKDAV 185 Query: 203 RKAILE 208 + I E Sbjct: 186 WQWIDE 191 >gi|291612510|ref|YP_003522667.1| ribosome biogenesis GTP-binding protein YsxC [Sideroxydans lithotrophicus ES-1] gi|291582622|gb|ADE10280.1| ribosome biogenesis GTP-binding protein YsxC [Sideroxydans lithotrophicus ES-1] Length = 204 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 108/202 (53%), Gaps = 14/202 (6%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F+++A F V + LP G E+AF GRSN GKSS IN L N LA TS PGRT Sbjct: 3 LFSQAA--FYTTVNHMKDLPLHGGKEVAFVGRSNAGKSSAINTLANHTRLAFTSKTPGRT 60 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 QHLN+F +L NN LVD+PGYGYA+ P W L+ YL R L + Sbjct: 61 QHLNYF------SLGNN---NYLVDLPGYGYAKVPPDVQAHWEHLLSEYLQTREELCGLV 111 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTA 184 +++D RH + + DQ + + I+LTK DKLS + +TL K +L ++P Sbjct: 112 VIMDARHPLTERDQGMLGWFAPTGKPIHILLTKSDKLSRQQSTQTLRDVKEFLAEHFPQC 171 Query: 185 HPEVIPTSSVKRKGIEVLRKAI 206 ++ SS+K+ G++ I Sbjct: 172 TAQLF--SSLKKAGMDEAEAMI 191 >gi|88705359|ref|ZP_01103070.1| GTP-binding protein engB [Congregibacter litoralis KT71] gi|88700449|gb|EAQ97557.1| GTP-binding protein engB [Congregibacter litoralis KT71] Length = 230 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 69/174 (39%), Positives = 97/174 (55%), Gaps = 11/174 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 VS + K+A FL ++ P+ E+AF+GRSN GKSS IN L LARTS Sbjct: 17 VSKPAYRKAA--FLTSAAKVSQCPEDIGWEVAFAGRSNAGKSSAINSLTQNHKLARTSKT 74 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +NFF + +VD+PGYGYA+ P+K W + YL ER +L Sbjct: 75 PGRTQLINFFTVGE---------QQRIVDLPGYGYAKVPQKLKQDWTKQMEAYLQERQSL 125 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 R + LL DCRH ++ DQ + ++ + + ++LTK DKLS ++TL K + Sbjct: 126 RGLILLSDCRHPLQPFDQQMLTWAAEADMPVHMLLTKCDKLSKGAGKQTLLKVR 179 >gi|110639099|ref|YP_679308.1| ribosome biogenesis GTP-binding protein YsxC [Cytophaga hutchinsonii ATCC 33406] gi|119369188|sp|Q11RJ8|ENGB_CYTH3 RecName: Full=Probable GTP-binding protein EngB gi|110281780|gb|ABG59966.1| GTP-binding protein [Cytophaga hutchinsonii ATCC 33406] Length = 199 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 75/196 (38%), Positives = 105/196 (53%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P+ PE AF GRSNVGKSSLIN L KNLA TS+ PG+TQ +N F Sbjct: 7 FISSYDDYQKCPEITKPEYAFIGRSNVGKSSLINSLTGVKNLAMTSSKPGKTQLINLFTI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ L D+PGYG+A+A + + WG ++ YL R+ L V+LL+D RH Sbjct: 67 EE---------TWILADLPGYGFAKASQSSRIKWGRMVHDYLKNRTNLTTVFLLVDSRHE 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 + D + ++L + + ++ TKIDK S T + L TK L N+ P++ TS Sbjct: 118 PMKSDLEQITWLASNGIPFSLIFTKIDKQSLTQTNKILASWTKVLSENWEEL-PKMFLTS 176 Query: 193 SVKRKGIEVLRKAILE 208 S KG E L I E Sbjct: 177 SESGKGTEELLTYIDE 192 >gi|73662400|ref|YP_301181.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|119369267|sp|Q49YA5|ENGB_STAS1 RecName: Full=Probable GTP-binding protein EngB gi|72494915|dbj|BAE18236.1| putative GTP-binding protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 195 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 11/171 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G E+ SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N+ N L Sbjct: 21 PETGLSEVGLSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY------NIDNQL- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ KK +++G +I +Y+S+R L+ V L+D RH + D ++++ Sbjct: 74 --VFVDVPGYGYAKVSKKQREAFGKMIEKYISQREELKLVIQLVDLRHNPTEDDILMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 L + +V TK DK++ Q+ L + + P E+I SSVK Sbjct: 132 LKYYEIPTFVVATKEDKIAKGKVQKHLANIQQKLEMEP--EDEIISYSSVK 180 >gi|269120910|ref|YP_003309087.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis ATCC 33386] gi|268614788|gb|ACZ09156.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis ATCC 33386] Length = 204 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/197 (39%), Positives = 111/197 (56%), Gaps = 17/197 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F++ I P+ E AF GRSNVGKSSLIN L NR+NLARTS PGRTQ +NFF V Sbjct: 8 FIKSAVVINDYPETTEIEFAFIGRSNVGKSSLINSLTNRRNLARTSKTPGRTQLINFFDV 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCR 131 +DF VD+PGYG+A+ P+ +WG +I YL S+R + V+LL+D R Sbjct: 68 NEDF----------YFVDLPGYGFAKVPEAVKKNWGKIIADYLNSDRE--KIVFLLLDIR 115 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 D ++ +L+ +++Y I+ TK DKLS + L++ K + + +V Sbjct: 116 RVPSAEDIEMLKWLEHYSINYYIIFTKTDKLSNNQKFKQLKEIK---KKLEFDNKDVFFY 172 Query: 192 SSVKRKGIEVLRKAILE 208 S++K G E L + I + Sbjct: 173 SALKNTGREELEEFIFD 189 >gi|326802551|ref|YP_004320370.1| GTP-binding protein engB [Sphingobacterium sp. 21] gi|326553315|gb|ADZ81700.1| GTP-binding protein engB [Sphingobacterium sp. 21] Length = 206 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 105/201 (52%), Gaps = 11/201 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M+S I + F+ I LP PE AF GRSNVGKSSLIN L K LA+TS Sbjct: 1 MLSLPIMIIKSAEFVCSNTRIDKLPPPTIPEYAFIGRSNVGKSSLINALTQHKGLAKTSQ 60 Query: 61 APGRTQHLN-FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 PG+TQ +N F V K++ LVD+PGYGYA+ K N W I +YL R Sbjct: 61 TPGKTQLINHFLVNKEW----------FLVDLPGYGYAKTSKTNRSEWEKFIKKYLFNRE 110 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 L+CV++LID R ++ D D L +K + + ++ TK DK S ++ +E + + Sbjct: 111 NLQCVFVLIDSRLTPQKNDLDFCCLLGEKGIPFILIFTKADKQSKIKSEHNIELFRKALL 170 Query: 180 NYPTAHPEVIPTSSVKRKGIE 200 + P I TSS R G + Sbjct: 171 TWFEEVPPHILTSSETRNGCD 191 >gi|187776854|ref|ZP_02993327.1| hypothetical protein CLOSPO_00393 [Clostridium sporogenes ATCC 15579] gi|187775513|gb|EDU39315.1| hypothetical protein CLOSPO_00393 [Clostridium sporogenes ATCC 15579] Length = 199 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 15/185 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIAF GRSNVGKS+LIN L NR+ L + S+ PG+T+ +NFF+ + Sbjct: 26 PEDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLINFFLINE--------- 76 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ KK ++WG ++ +YL ER L+ + LL+D RH D +++++ Sbjct: 77 NMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVDSRHKPTSDDINMYNW 136 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVL 202 + +V TK+DKL + + K K +IR+ + ++ SS+ ++G E + Sbjct: 137 IKHYNYEVLVVGTKLDKLK----RNDINKNKKIIRDTLKMDKDDKILLISSLNKEGKEEV 192 Query: 203 RKAIL 207 + IL Sbjct: 193 LEQIL 197 >gi|296105443|ref|YP_003615589.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059902|gb|ADF64640.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 209 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ P++ W + YL +R L+ + +L+D RH Sbjct: 71 AE---------GKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRMCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + + + + + +V SS Sbjct: 122 LKDLDQQMIDWAVASDIAVLVLLTKADKLASGARKAQVNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|240146202|ref|ZP_04744803.1| ribosome biogenesis GTP-binding protein YsxC [Roseburia intestinalis L1-82] gi|257201678|gb|EEU99962.1| ribosome biogenesis GTP-binding protein YsxC [Roseburia intestinalis L1-82] Length = 208 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 108/188 (57%), Gaps = 15/188 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P E+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ D Sbjct: 18 VPDTAYAEVAFAGKSNVGKSSLINALMNRKVLARTSAQPGKTQTINFYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 AM LVD+PGYGYA+A ++ WG +I YL L+ V+LLID RH D+ ++ Sbjct: 70 -AMYLVDLPGYGYAKASEEVKAKWGKMIENYLHTSKQLKAVFLLIDIRHDPSANDRMMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + + I+ TK+DK+ + Q+ ++ + + P +IP S+ ++G R Sbjct: 129 WMVYQGFAPIIIATKLDKIKRSQIQKNVKAIREGLNVQPGTM--IIPFSAETKQG----R 182 Query: 204 KAILETIN 211 I E I+ Sbjct: 183 DEIWELID 190 >gi|15892061|ref|NP_359775.1| GTPase EngB [Rickettsia conorii str. Malish 7] gi|15619181|gb|AAL02676.1| hypothetical GTP-binding protein [Rickettsia conorii str. Malish 7] Length = 236 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 67/150 (44%), Positives = 86/150 (57%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I + PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ +NFF Sbjct: 48 FVAGAMNINQILNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFFNL 107 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A P + WG LI YL LR V LLID R G Sbjct: 108 AD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSRRG 158 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K+ D+ V L +QI+ TK DK++ Sbjct: 159 IKENDKKVADLLLANKREFQIIFTKSDKVT 188 >gi|89110163|ref|AP_003943.1| GTP-binding protein [Escherichia coli str. K-12 substr. W3110] gi|170083337|ref|YP_001732657.1| GTP-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|209921338|ref|YP_002295422.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli SE11] gi|218556424|ref|YP_002389338.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli IAI1] gi|218560940|ref|YP_002393853.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli S88] gi|218692151|ref|YP_002400363.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli ED1a] gi|218697578|ref|YP_002405245.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli 55989] gi|218701436|ref|YP_002409065.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli IAI39] gi|218707490|ref|YP_002415009.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli UMN026] gi|254163816|ref|YP_003046924.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B str. REL606] gi|300819243|ref|ZP_07099443.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 107-1] gi|300823684|ref|ZP_07103810.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 119-7] gi|300896904|ref|ZP_07115391.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 198-1] gi|300906179|ref|ZP_07123892.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 84-1] gi|300919046|ref|ZP_07135591.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 115-1] gi|300925949|ref|ZP_07141782.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 182-1] gi|300931705|ref|ZP_07147011.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 187-1] gi|300937087|ref|ZP_07151950.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 21-1] gi|300948175|ref|ZP_07162303.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 116-1] gi|300958280|ref|ZP_07170425.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 175-1] gi|301023770|ref|ZP_07187506.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 69-1] gi|301303330|ref|ZP_07209454.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 124-1] gi|301328178|ref|ZP_07221308.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 78-1] gi|301648437|ref|ZP_07248169.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 146-1] gi|309797830|ref|ZP_07692213.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 145-7] gi|312971850|ref|ZP_07786024.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|85676194|dbj|BAE77444.1| GTP-binding protein [Escherichia coli str. K12 substr. W3110] gi|169891172|gb|ACB04879.1| GTP-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|209914597|dbj|BAG79671.1| GTP-binding protein [Escherichia coli SE11] gi|218354310|emb|CAQ86984.2| GTP-binding protein [Escherichia coli 55989] gi|218363193|emb|CAR00835.1| GTP-binding protein [Escherichia coli IAI1] gi|218367709|emb|CAR05498.1| GTP-binding protein [Escherichia coli S88] gi|218371422|emb|CAR19255.1| GTP-binding protein [Escherichia coli IAI39] gi|218429715|emb|CAV18037.1| GTP-binding protein [Escherichia coli ED1a] gi|218434587|emb|CAR15516.1| GTP-binding protein [Escherichia coli UMN026] gi|242379402|emb|CAQ34216.1| cell division protein; predicted checkpoint GTPase [Escherichia coli BL21(DE3)] gi|253975717|gb|ACT41388.1| GTP-binding protein [Escherichia coli B str. REL606] gi|253979873|gb|ACT45543.1| GTP-binding protein [Escherichia coli BL21(DE3)] gi|300315049|gb|EFJ64833.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 175-1] gi|300359270|gb|EFJ75140.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 198-1] gi|300396884|gb|EFJ80422.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 69-1] gi|300402015|gb|EFJ85553.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 84-1] gi|300413838|gb|EFJ97148.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 115-1] gi|300417986|gb|EFK01297.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 182-1] gi|300452285|gb|EFK15905.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 116-1] gi|300457830|gb|EFK21323.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 21-1] gi|300460511|gb|EFK24004.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 187-1] gi|300523746|gb|EFK44815.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 119-7] gi|300528129|gb|EFK49191.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 107-1] gi|300841284|gb|EFK69044.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 124-1] gi|300845351|gb|EFK73111.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 78-1] gi|301073492|gb|EFK88298.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 146-1] gi|308118586|gb|EFO55848.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 145-7] gi|309704290|emb|CBJ03639.1| probable GTP-binding protein [Escherichia coli ETEC H10407] gi|310334227|gb|EFQ00432.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|315254226|gb|EFU34194.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 85-1] gi|315618770|gb|EFU99354.1| conserved hypothetical protein [Escherichia coli 3431] gi|323161075|gb|EFZ46993.1| hypothetical protein ECE128010_2621 [Escherichia coli E128010] gi|323167490|gb|EFZ53197.1| hypothetical protein SS53G_2212 [Shigella sonnei 53G] gi|323174271|gb|EFZ59898.1| hypothetical protein ECLT68_1102 [Escherichia coli LT-68] gi|323177874|gb|EFZ63458.1| hypothetical protein ECOK1180_3470 [Escherichia coli 1180] gi|323182381|gb|EFZ67788.1| hypothetical protein ECOK1357_4237 [Escherichia coli 1357] gi|324019780|gb|EGB88999.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 117-3] Length = 198 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD-- 60 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 61 -------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 113 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + ++ ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 114 DQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLKKQ 172 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 173 GVDKLRQKL 181 >gi|331675323|ref|ZP_08376073.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA280] gi|331685601|ref|ZP_08386184.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H299] gi|12518743|gb|AAG59053.1|AE005617_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|331067383|gb|EGI38788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA280] gi|331077072|gb|EGI48287.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H299] Length = 199 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 4 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD-- 61 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 62 -------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 114 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + ++ ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 115 DQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLKKQ 173 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 174 GVDKLRQKL 182 >gi|113869399|ref|YP_727888.1| ribosome biogenesis GTP-binding protein YsxC [Ralstonia eutropha H16] gi|123133546|sp|Q0K651|ENGB_CUPNH RecName: Full=Probable GTP-binding protein EngB gi|113528175|emb|CAJ94520.1| Predicted GTPase [Ralstonia eutropha H16] Length = 233 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 8/193 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F + +K Sbjct: 19 LPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSRTPGRTQHINYF---SVAPVKAPD 75 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA W GL+ Y+ R L + L++D R +D + Sbjct: 76 PLAFLVDLPGYGYAEVSGSAKYHWQGLLSDYVQTRQQLSGLILMMDARRPFTDLDCQMVE 135 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-----SSVKRKG 198 + ++LTK DKL+ + + L +T+ +++ Y +P SS+KR+G Sbjct: 136 WFLPTGRPIHVLLTKADKLTNSDNAKALRETRKMLQGYAEQMETPVPMTAQLFSSLKRRG 195 Query: 199 IEVLRKAILETIN 211 IE + I +N Sbjct: 196 IEEAQGVIAGWLN 208 >gi|218550896|ref|YP_002384687.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia fergusonii ATCC 35469] gi|218358437|emb|CAQ91084.1| GTP-binding protein [Escherichia fergusonii ATCC 35469] Length = 198 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD-- 60 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 61 -------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 113 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + ++ ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 114 DQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLKKQ 172 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 173 GVDKLRQKL 181 >gi|295135644|ref|YP_003586320.1| GTPase EngB [Zunongwangia profunda SM-A87] gi|294983659|gb|ADF54124.1| GTPase EngB [Zunongwangia profunda SM-A87] Length = 200 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 11/186 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFV 72 F+ ++ P + PE AF GRSNVGKSSLIN+L RKNLA+TS PG+TQ +N F + Sbjct: 8 FVVSNSKVAKCPNSPLPEYAFIGRSNVGKSSLINMLTGRKNLAKTSAKPGKTQLINHFLI 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K++ LVD+PGYGYA+ K + I Y ER L C ++LID RH Sbjct: 68 NKNWH----------LVDLPGYGYAKVSKSAKKVFQKFITNYFEERKQLVCAFVLIDSRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + ID + +L + A+ + ++ TK DKL P ++ + + + P TS Sbjct: 118 KPQPIDMEFMQWLGEHAIPFCMIFTKADKLKPKELEKNILNYQEEMLQVWEQMPHFFVTS 177 Query: 193 SVKRKG 198 S + G Sbjct: 178 STAKTG 183 >gi|157273342|gb|ABV27241.1| GTP-binding protein [Candidatus Chloracidobacterium thermophilum] Length = 201 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/193 (39%), Positives = 106/193 (54%), Gaps = 15/193 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P PE+AF GRSNVGKSSLIN L+ + LARTSN PGRTQ +NFF Sbjct: 8 FLKSATVAADYPPPTLPEVAFLGRSNVGKSSLINSLLGVRGLARTSNTPGRTQLINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYGYAR P+K + W +I YL RS L L++D R Sbjct: 66 ----EINREL---RFVDLPGYGYARVPQKIRERWRPMIESYLYHRSALALCVLIVDVRLA 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + +D+ ++ +L + + +V TK DKLS + L + L Y P+V+P SS Sbjct: 119 PQPLDRTMYEWLVATSRPFCLVATKADKLS---RSQLLSQLSVLRAAY---GPDVLPYSS 172 Query: 194 VKRKGIEVLRKAI 206 + R G + + +AI Sbjct: 173 LTRAGADQVWEAI 185 >gi|260220214|emb|CBA27528.1| Probable GTP-binding protein engB [Curvibacter putative symbiont of Hydra magnipapillata] Length = 251 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 73/190 (38%), Positives = 100/190 (52%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP+ PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N F Sbjct: 44 FLTTAPQLHFLPELDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINLFAL 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K L D+PGYGYA PK++ W ++ YL R L+ + L+ D RHG Sbjct: 104 G-----KQGATDAVLTDLPGYGYAAVPKQDKIRWQQVMANYLVTRKNLKAIVLMCDPRHG 158 Query: 134 VKQIDQ---DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ DV + + + +VLTK DKL+ + + L TK EV Sbjct: 159 MTELDEILLDVIRPRVAEGLKFLVVLTKADKLTRSEGAKVLSITK-----LQAGGGEVRL 213 Query: 191 TSSVKRKGIE 200 S+ KR GI+ Sbjct: 214 FSATKRTGID 223 >gi|331644593|ref|ZP_08345712.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H736] gi|331655546|ref|ZP_08356538.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli M718] gi|331665512|ref|ZP_08366410.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA143] gi|331670706|ref|ZP_08371542.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA271] gi|331679971|ref|ZP_08380633.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H591] gi|26111058|gb|AAN83241.1|AE016770_41 Probable GTP-binding protein engB [Escherichia coli CFT073] gi|147313|gb|AAA24403.1| unidentified protein [Escherichia coli] gi|304970|gb|AAB02999.1| matches PS00017: ATP_GTP_A [Escherichia coli str. K-12 substr. MG1655] gi|73857847|gb|AAZ90554.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|81243109|gb|ABB63819.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|91074985|gb|ABE09866.1| probable GTP-binding cell division protein [Escherichia coli UTI89] gi|331036055|gb|EGI08291.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H736] gi|331046647|gb|EGI18732.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli M718] gi|331057197|gb|EGI29187.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA143] gi|331061961|gb|EGI33884.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA271] gi|331072297|gb|EGI43630.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H591] Length = 199 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 4 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD-- 61 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 62 -------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 114 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + ++ ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 115 DQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLKKQ 173 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 174 GVDKLRQKL 182 >gi|30250379|ref|NP_842449.1| GTPase EngB [Nitrosomonas europaea ATCC 19718] gi|81584537|sp|Q82S94|ENGB_NITEU RecName: Full=Probable GTP-binding protein EngB gi|30181174|emb|CAD86370.1| putative GTP-binding protein [Nitrosomonas europaea ATCC 19718] Length = 222 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 107/200 (53%), Gaps = 14/200 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 ++H +F + F V + LP+ E+AF+GRSN GKSS IN LV R+ A S Sbjct: 1 MTHPLFRHAE--FYTTVNRLQDLPQTAGVEVAFAGRSNAGKSSAINTLVGRERFAFVSKT 58 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQH+NFF + +VD+PGYGYA+ P WG L+ YL R +L Sbjct: 59 PGRTQHINFFQLGE---------ERFMVDLPGYGYAQVPLAIRQHWGHLLSSYLQTRQSL 109 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL-EKTKYLIRN 180 + L++D RH + ++D + + + ++LTK DKLS + A L E ++L N Sbjct: 110 YGMILIMDIRHPLTKLDLQMLDWFRQTKKPVHVLLTKADKLSKSRALVALNEVRQFLTVN 169 Query: 181 YPTAHPEVIPTSSVKRKGIE 200 YP H V SS+K G+E Sbjct: 170 YP--HCTVQTFSSLKVAGVE 187 >gi|319403767|emb|CBI77351.1| GTP-binding protein (fragment) [Bartonella rochalimae ATCC BAA-1498] Length = 121 Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 60/120 (50%), Positives = 82/120 (68%) Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 MPGYG+A APK +++W LI YL R+TL+ VY+LID RHG+K+ D D + LDK AV Sbjct: 1 MPGYGFAEAPKNLINAWTHLIFDYLRGRTTLKRVYVLIDSRHGIKKNDTDTLNLLDKAAV 60 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 SYQIVLTK DK+ T + + TK + +P A+PE++ TS+ K G+E LR AI++ I Sbjct: 61 SYQIVLTKSDKIKFNTLEALITMTKTKLLKHPAAYPEILVTSAEKASGLEELRAAIIQAI 120 >gi|224476764|ref|YP_002634370.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus carnosus subsp. carnosus TM300] gi|254783209|sp|B9DNB9|ENGB_STACT RecName: Full=Probable GTP-binding protein EngB gi|222421371|emb|CAL28185.1| putative GTP-binding protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 195 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 102/182 (56%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G E+A +GRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ D Sbjct: 21 PETGLEEVALAGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ KK + +G +I +Y+++R L+ V LID RH + D ++ F Sbjct: 72 QMIFVDVPGYGYAKVSKKQREQFGKMIEKYITQREQLKVVVQLIDIRHNPTEDDVLMYDF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + I+ TK DK++ Q+ L+ K + +I SSV K +V+ Sbjct: 132 LKYYDLPVLIIATKEDKIAKGKVQKHLKNIKDKLE--LEEEDTIISYSSVTNKNQQVIWD 189 Query: 205 AI 206 AI Sbjct: 190 AI 191 >gi|256847018|ref|ZP_05552464.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus coleohominis 101-4-CHN] gi|256715682|gb|EEU30657.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus coleohominis 101-4-CHN] Length = 196 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 74/181 (40%), Positives = 102/181 (56%), Gaps = 14/181 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA GRSNVGKSSL N L+NRKN A TS+ PG+TQ LNF+ +D Sbjct: 19 PSTDYPEIALVGRSNVGKSSLTNALINRKNFAHTSSQPGKTQTLNFYNVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + +G +I YL++RS LR V +L+D RH D ++ + Sbjct: 70 KLYFVDVPGYGYAKVSKKQREEFGQMIENYLTQRSQLRGVIMLVDGRHAPTADDVQMYQW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TKIDK+ P+ T + L K K + P V+ ++ KR +V Sbjct: 130 LAYYELPILVVATKIDKVKPSQFTRVQKLVKDKL---EFQEKQPLVLFSAMSKRGKEDVW 186 Query: 203 R 203 R Sbjct: 187 R 187 >gi|225870477|ref|YP_002746424.1| GTP-binding protein [Streptococcus equi subsp. equi 4047] gi|254783210|sp|C0MA50|ENGB_STRE4 RecName: Full=Probable GTP-binding protein EngB gi|225699881|emb|CAW93776.1| putative GTP-binding protein [Streptococcus equi subsp. equi 4047] Length = 199 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 78/184 (42%), Positives = 99/184 (53%), Gaps = 11/184 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RK+LARTS+ PG+TQ LNFF D Sbjct: 25 PQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K WG +I YL+ R LR V L+D RH Q D ++ F Sbjct: 76 KLRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHESSQDDIQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ P E N+ +I SSV+R GI+ Sbjct: 136 LKYYEIPVIIVATKADKV-PRGRWNKHESMVKKSLNFDQTDAFII-FSSVERIGIDESWD 193 Query: 205 AILE 208 ILE Sbjct: 194 TILE 197 >gi|320660847|gb|EFX28293.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. USDA 5905] Length = 198 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD-- 60 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 61 -------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 113 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + ++ ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 114 DQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLKKQ 172 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 173 GVDKLRQKL 181 >gi|294501425|ref|YP_003565125.1| hypothetical protein BMQ_4688 [Bacillus megaterium QM B1551] gi|295706773|ref|YP_003599848.1| hypothetical protein BMD_4674 [Bacillus megaterium DSM 319] gi|294351362|gb|ADE71691.1| GTP-binding conserved hypothetical protein [Bacillus megaterium QM B1551] gi|294804432|gb|ADF41498.1| conserved hypothetical protein [Bacillus megaterium DSM 319] Length = 195 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 9/148 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A +GRSNVGKSS IN ++NRK+LARTS+ PG+TQ LNFF+ + Sbjct: 19 PKENLPEFALAGRSNVGKSSFINKMLNRKSLARTSSKPGKTQTLNFFLINEI-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+A+ KK ++WG +I YL+ R L+ V +++D RH + D ++ F Sbjct: 71 -LHFVDVPGYGFAKVSKKEREAWGKMIETYLTNREQLKAVLMIVDLRHAPSKDDVMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLE 172 L + ++ TK DK+ Q+ L+ Sbjct: 130 LKHHDLPVMVIATKADKIPKGKWQKHLK 157 >gi|51473248|ref|YP_067005.1| GTPase EngB [Rickettsia typhi str. Wilmington] gi|81610845|sp|Q68XW9|ENGB_RICTY RecName: Full=Probable GTP-binding protein EngB gi|51459560|gb|AAU03523.1| probable GTP-binding protein EngB [Rickettsia typhi str. Wilmington] Length = 214 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 109/202 (53%), Gaps = 18/202 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G I +P PEI F G+SNVGKSS+IN + N K+LA+ SN PGRT+ +NFF Sbjct: 26 FVAGANHINQIPDFSLPEIVFVGKSNVGKSSIINTICNNKSLAKVSNIPGRTRQINFF-- 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N + + +VD+PGYG+A P + W LI YL L V LLID R G Sbjct: 84 -------NIIDKLIIVDLPGYGFANVPISVKEQWEVLITYYLRNSHNLMLVNLLIDSRRG 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAH--PEVIP 190 +K+ D+ V L +QI+ TK DK+ T ++ L Y +N+ T H VI Sbjct: 137 IKENDKKVAELLLANKREFQIIFTKSDKV---TDRKNLN---YEAQNFLATLHYSCNVIY 190 Query: 191 TSSVKRKGIEVLRKAILETINY 212 SS ++G + L+ ++ + I Y Sbjct: 191 VSSRSKEGTKELKASLAKCIKY 212 >gi|167761300|ref|ZP_02433427.1| hypothetical protein CLOSCI_03705 [Clostridium scindens ATCC 35704] gi|167660966|gb|EDS05096.1| hypothetical protein CLOSCI_03705 [Clostridium scindens ATCC 35704] Length = 200 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 17/178 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ N Sbjct: 18 LPDNQLPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGYA+ ++ WG LI RYL + L+ V+LLID RH D+ ++ Sbjct: 69 EELYLVDLPGYGYAKVSEQEKAKWGKLIERYLHGSAQLKAVFLLIDIRHDPSANDKMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY---LIRNYPTAHPEVIPTSSVKRKG 198 ++ + + I+ TK+DK+ + + L+ + L+R +V+P SSV ++G Sbjct: 129 WIVAQGYNPIIIATKLDKIKRSQVDKHLKAVRQGLNLVRG-----TKVLPFSSVTKQG 181 >gi|69246839|ref|ZP_00604148.1| GTP-binding protein [Enterococcus faecium DO] gi|257878468|ref|ZP_05658121.1| GTP-binding protein [Enterococcus faecium 1,230,933] gi|257882890|ref|ZP_05662543.1| GTP-binding protein [Enterococcus faecium 1,231,502] gi|257889332|ref|ZP_05668985.1| GTP-binding protein [Enterococcus faecium 1,231,410] gi|257894345|ref|ZP_05673998.1| GTP-binding protein [Enterococcus faecium 1,231,408] gi|258616007|ref|ZP_05713777.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium DO] gi|260560057|ref|ZP_05832235.1| GTP-binding protein [Enterococcus faecium C68] gi|261207454|ref|ZP_05922140.1| GTP-binding protein [Enterococcus faecium TC 6] gi|289565865|ref|ZP_06446306.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium D344SRF] gi|293559816|ref|ZP_06676334.1| GTP-binding protein [Enterococcus faecium E1162] gi|293568081|ref|ZP_06679418.1| GTP-binding protein [Enterococcus faecium E1071] gi|294617406|ref|ZP_06697040.1| GTP-binding protein [Enterococcus faecium E1679] gi|294623405|ref|ZP_06702261.1| GTP-binding protein [Enterococcus faecium U0317] gi|314939703|ref|ZP_07846927.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133a04] gi|314942231|ref|ZP_07849083.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133C] gi|314948864|ref|ZP_07852234.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0082] gi|314950806|ref|ZP_07853878.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133A] gi|314993229|ref|ZP_07858608.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133B] gi|314995228|ref|ZP_07860341.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133a01] gi|68195072|gb|EAN09534.1| GTP-binding protein [Enterococcus faecium DO] gi|257812696|gb|EEV41454.1| GTP-binding protein [Enterococcus faecium 1,230,933] gi|257818548|gb|EEV45876.1| GTP-binding protein [Enterococcus faecium 1,231,502] gi|257825692|gb|EEV52318.1| GTP-binding protein [Enterococcus faecium 1,231,410] gi|257830724|gb|EEV57331.1| GTP-binding protein [Enterococcus faecium 1,231,408] gi|260073892|gb|EEW62216.1| GTP-binding protein [Enterococcus faecium C68] gi|260078345|gb|EEW66050.1| GTP-binding protein [Enterococcus faecium TC 6] gi|289162325|gb|EFD10184.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium D344SRF] gi|291589163|gb|EFF20974.1| GTP-binding protein [Enterococcus faecium E1071] gi|291596312|gb|EFF27571.1| GTP-binding protein [Enterococcus faecium E1679] gi|291597171|gb|EFF28366.1| GTP-binding protein [Enterococcus faecium U0317] gi|291606235|gb|EFF35651.1| GTP-binding protein [Enterococcus faecium E1162] gi|313590558|gb|EFR69403.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133a01] gi|313592284|gb|EFR71129.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133B] gi|313597021|gb|EFR75866.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133A] gi|313599003|gb|EFR77848.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133C] gi|313641038|gb|EFS05618.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133a04] gi|313644737|gb|EFS09317.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0082] Length = 195 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA +GRSNVGKSS IN L++RKNLARTS PG+TQ LNF++ ++ Sbjct: 19 PDTQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQTLNFYLIEN--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Q D ++ F Sbjct: 70 ALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTRDQLRAVVSLVDLRHKPSQEDIQMYQF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TK DK+ Sbjct: 130 LKYYDIPVIVVATKADKI 147 >gi|146299560|ref|YP_001194151.1| GTPase EngB [Flavobacterium johnsoniae UW101] gi|189037178|sp|A5FIZ1|ENGB_FLAJ1 RecName: Full=Probable GTP-binding protein EngB gi|146153978|gb|ABQ04832.1| GTP-binding protein, HSR1-related [Flavobacterium johnsoniae UW101] Length = 210 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 74/196 (37%), Positives = 102/196 (52%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + PK PE AF GRSNVGKSSLIN++ N KNLA+TS PG+TQ +N F Sbjct: 8 FIVSNSDAAKCPKDFLPEYAFIGRSNVGKSSLINMITNHKNLAKTSGKPGKTQLINHF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + NN LVD+PGYGYA+ KK + I Y R L C ++LID RH Sbjct: 66 ----KINNNW---FLVDLPGYGYAKVSKKTKSIFQQFITDYFENREQLVCAFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 ++ID + S++ + + + I+ TK DK+S + K + N P+ TS Sbjct: 119 AQKIDIEFMSYMGESEIPFCIIFTKADKISKGKIDSHIAAYRKQMYANNWAEMPQYFVTS 178 Query: 193 SVKRKGIEVLRKAILE 208 S + G + L I E Sbjct: 179 STESIGKDELLTYIDE 194 >gi|329116776|ref|ZP_08245493.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parauberis NCFD 2020] gi|326907181|gb|EGE54095.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parauberis NCFD 2020] Length = 199 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 78/188 (41%), Positives = 102/188 (54%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA +GRSNVGKSS IN ++ RKNLARTS+ PG+TQ LNFF N+ + L Sbjct: 25 PDDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFF------NIDDKL- 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ R LR V L+D RH D ++ F Sbjct: 78 --RFVDVPGYGYAKVSKSERAKWGKMIEEYLTTRDNLRAVVSLVDLRHEPSTEDVQMYDF 135 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K K N+ + + I SSV R GI+ Sbjct: 136 LKYYEIPVIVVATKADKIPRGKWNKHESMVKKKL---NFDKS-DQFIVFSSVDRIGIDQA 191 Query: 203 RKAILETI 210 IL+ I Sbjct: 192 WDTILDQI 199 >gi|160933533|ref|ZP_02080921.1| hypothetical protein CLOLEP_02379 [Clostridium leptum DSM 753] gi|156867410|gb|EDO60782.1| hypothetical protein CLOLEP_02379 [Clostridium leptum DSM 753] Length = 199 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 73/185 (39%), Positives = 97/185 (52%), Gaps = 12/185 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G LP PEI FSG+SNVGKSSLIN L+NRKNLAR S PG+T +NF+ Sbjct: 16 GQLPAGDLPEIVFSGKSNVGKSSLINKLLNRKNLARVSATPGKTATINFY---------- 65 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L LVD+PGYGYA+ W L+ Y + L V L+D RH + D + Sbjct: 66 RLDQARLVDLPGYGYAKVSLAEKKRWAELVEGYFQQERNLALVVQLVDMRHPPTKDDLHM 125 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 FL + + LTK DKL+ T ++ L + +Y +IP SSV +G+E Sbjct: 126 IEFLCDGGFPFLVALTKSDKLNQTERRQRLAALEEAFSDYEGLR--LIPFSSVTGEGVEE 183 Query: 202 LRKAI 206 LR+ + Sbjct: 184 LREIL 188 >gi|291563762|emb|CBL42578.1| ribosome biogenesis GTP-binding protein YsxC/EngB [butyrate-producing bacterium SS3/4] Length = 226 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 71/179 (39%), Positives = 106/179 (59%), Gaps = 15/179 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PE AF+G+SNVGKSSLIN L+NRK LARTS+ PG+TQ +NF+ N+ +L Sbjct: 18 LPENTLPEFAFAGKSNVGKSSLINALMNRKALARTSSQPGKTQTINFY------NINGDL 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ P+ WG +I YL + L+CV+LL+D RH D+ ++ Sbjct: 72 ---YYVDLPGYGYAKVPQSEKVKWGRMIENYLHKSQMLKCVFLLVDIRHEPSANDKTMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIE 200 ++ I+ TK+DK+ + Q+ ++ LIR + +IP S+ ++G E Sbjct: 129 WIVYNGFRPVIIATKLDKIKRSQIQKQVK----LIRTGLGMEKQDILIPFSAETKQGRE 183 >gi|225378746|ref|ZP_03755967.1| hypothetical protein ROSEINA2194_04416 [Roseburia inulinivorans DSM 16841] gi|225209405|gb|EEG91759.1| hypothetical protein ROSEINA2194_04416 [Roseburia inulinivorans DSM 16841] Length = 204 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 105/176 (59%), Gaps = 11/176 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+G+SNVGKSS+IN L+NRK+LARTS PG+TQ +NF+ D AM LVD Sbjct: 25 EVAFAGKSNVGKSSMINALLNRKSLARTSAQPGKTQTINFYNVND---------AMYLVD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ + WG +I YL L+ V+LLID RH D+ ++ ++ + Sbjct: 76 LPGYGYAKTSSSEKEKWGKMIENYLHTSKKLQAVFLLIDIRHDPSANDKMMYDWMVYQGF 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I+ TK+DK+ + Q+ ++ + ++ P +IP SS ++G + L + I Sbjct: 136 TPIIIATKLDKIKRSQIQKNVKAIREGLKVKPGTV--IIPFSSETKQGRDELWEVI 189 >gi|192361932|ref|YP_001983930.1| putative GTPase [Cellvibrio japonicus Ueda107] gi|190688097|gb|ACE85775.1| putative GTPase, involved in coordination of cell cycle (EngB) [Cellvibrio japonicus Ueda107] Length = 219 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 107/198 (54%), Gaps = 11/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I P E+AF+GRSN GKSS IN L N LARTS PGRTQ +NFF Sbjct: 12 FLTSAPSIRQCPPETGREVAFAGRSNAGKSSAINALTNNHRLARTSKTPGRTQLINFFTL 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D A LVD+PGYGYA+ ++ + W + YL R TL+ + LL+D RH Sbjct: 72 GD--------EAYRLVDLPGYGYAKVSRELKEQWQRDLSEYLERRKTLQGLVLLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI--PT 191 +++ D + + + + I+LTK DKLS + TL K ++N ++ P Sbjct: 124 LQEFDSAILHWAMQGQMPVHILLTKADKLSRSQVNNTLFKVHKELKNLGLHDNKLSLQPF 183 Query: 192 SSVKRKGIEVLRKAILET 209 S++ G++ L K++L++ Sbjct: 184 SALSNSGVDEL-KSVLQS 200 >gi|219856299|ref|YP_002473421.1| hypothetical protein CKR_2956 [Clostridium kluyveri NBRC 12016] gi|219570023|dbj|BAH08007.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 201 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 104/188 (55%), Gaps = 11/188 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK EIAF GRSNVGKSSLIN L NRK L + S PG+T+ +NFF L NN Sbjct: 23 PKDKRIEIAFVGRSNVGKSSLINALTNRKKLVKVSGTPGKTRLINFF-------LINN-- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K SWG ++ YL R L+ V LL+DCRH D ++ + Sbjct: 74 EFYFVDLPGYGYAKISKTEKKSWGKVVEDYLRGREELKRVILLLDCRHKPTNDDITMYKW 133 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK+DK+S + + L+ K ++ P E++ SS+ ++G E K Sbjct: 134 LKYYNYNTIIVATKVDKVSKSQLFKNLKIIKDTLK--PETGDEILTFSSLNKQGKEEFLK 191 Query: 205 AILETINY 212 + I++ Sbjct: 192 VLESVIDF 199 >gi|117620801|ref|YP_854796.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166225937|sp|A0KEY0|ENGB_AERHH RecName: Full=Probable GTP-binding protein EngB gi|117562208|gb|ABK39156.1| GTP-binding protein YihA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 216 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 12/194 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP G EIAF+GRSN GKSS +N L KNLARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINLFEL 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA+ P + W + YL R +L+ + +L+D RH Sbjct: 73 E---------PGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTS 192 +K D ++ + + + ++LTK DKLSP + K + + P E S Sbjct: 124 LKDTDMNMLEWSSHRKLPVMLLLTKADKLSPGPRNNQVIKVRQAVAELGPQIQVEAF--S 181 Query: 193 SVKRKGIEVLRKAI 206 S+ + G+E L + + Sbjct: 182 SLTQIGVEKLAQTL 195 >gi|326803637|ref|YP_004321455.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus urinae ACS-120-V-Col10a] gi|326650781|gb|AEA00964.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus urinae ACS-120-V-Col10a] Length = 200 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 100/187 (53%), Gaps = 15/187 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + PEIA +GRSNVGKSS IN + N K +AR S+ PG+TQ LN++ NL N+L Sbjct: 20 PVSDRPEIALAGRSNVGKSSFINTMTNHKKIARISSKPGKTQQLNYY------NLDNSL- 72 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K W + Y +R L V+LL+D RH + D ++ F Sbjct: 73 --YLVDVPGYGYAKVSKTERSRWQKQLADYFIQRENLEAVFLLVDFRHRPSKDDINMKDF 130 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 LD+ V Y I+ TK DK+ L+ K + +++P SS R+G R Sbjct: 131 LDQCQVPYFIIATKADKVKKNQWHNHLQAIKEDLD--LVTEDQILPYSSANREG----RD 184 Query: 205 AILETIN 211 E IN Sbjct: 185 EAWEVIN 191 >gi|152990528|ref|YP_001356250.1| GTP-binding protein [Nitratiruptor sp. SB155-2] gi|151422389|dbj|BAF69893.1| GTP-binding protein [Nitratiruptor sp. SB155-2] Length = 202 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 110/200 (55%), Gaps = 16/200 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P I P A E+AF GRSNVGKSSL+N L +RKNLA++S PG+T+ +NFF Sbjct: 9 FVTSAPTIKQAPPASMSEVAFLGRSNVGKSSLLNALTDRKNLAKSSATPGKTKLINFF-D 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ P + VD+PGYGYA+A K + W + ++L+ R +R LID RH Sbjct: 68 VEYKIGDKRFP-LRFVDLPGYGYAKASKTLKNEWQKHLTQFLANRDAIRVFVHLIDARHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 ID+ SFL QIV+ TK DKL Q+ L K + YP A + Sbjct: 127 YMMIDEQTRSFLQSIKKKDQIVIEVFTKADKLK----QKELAALK---KRYPNA----LL 175 Query: 191 TSSVKRKGIEVLRKAILETI 210 S++ ++GIE L+ ILE + Sbjct: 176 ISNMTKRGIEELKHKILEHV 195 >gi|81247620|gb|ABB68328.1| conserved hypothetical protein [Shigella boydii Sb227] Length = 199 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 4 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD-- 61 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 62 -------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRHSLQGLVVLMDIRHPLKDL 114 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + ++ ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 115 DQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLKKQ 173 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 174 GVDKLRQKL 182 >gi|194290991|ref|YP_002006898.1| ribosome biogenesis gtp-binding protein ysxc [Cupriavidus taiwanensis LMG 19424] gi|238692783|sp|B3R7D7|ENGB_CUPTR RecName: Full=Probable GTP-binding protein EngB gi|193224826|emb|CAQ70837.1| GTPase binding protein, involved in coordination of cell cycle [Cupriavidus taiwanensis LMG 19424] Length = 237 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 8/193 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F + +K Sbjct: 19 LPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSRTPGRTQHINYF---SVAPVKAPD 75 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA W GL+ Y+ R L + L++D R +D + Sbjct: 76 PLAFLVDLPGYGYAEVSGSAKYHWQGLLSDYVQTRQQLAGLILMMDARRPFTDLDCQMVE 135 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-----SSVKRKG 198 + ++LTK DKL+ + + L +T+ +++ Y +P SS+KR+G Sbjct: 136 WFLPTGRPIHVLLTKADKLTNSENAKALRETRKMLQGYAEQLETPVPMTAQLFSSLKRRG 195 Query: 199 IEVLRKAILETIN 211 IE + I +N Sbjct: 196 IEEAQAVIAGWLN 208 >gi|153955957|ref|YP_001396722.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium kluyveri DSM 555] gi|189037173|sp|A5N2K5|ENGB_CLOK5 RecName: Full=Probable GTP-binding protein EngB gi|146348815|gb|EDK35351.1| EngB [Clostridium kluyveri DSM 555] Length = 197 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 104/188 (55%), Gaps = 11/188 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK EIAF GRSNVGKSSLIN L NRK L + S PG+T+ +NFF L NN Sbjct: 19 PKDKRIEIAFVGRSNVGKSSLINALTNRKKLVKVSGTPGKTRLINFF-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K SWG ++ YL R L+ V LL+DCRH D ++ + Sbjct: 70 EFYFVDLPGYGYAKISKTEKKSWGKVVEDYLRGREELKRVILLLDCRHKPTNDDITMYKW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK+DK+S + + L+ K ++ P E++ SS+ ++G E K Sbjct: 130 LKYYNYNTIIVATKVDKVSKSQLFKNLKIIKDTLK--PETGDEILTFSSLNKQGKEEFLK 187 Query: 205 AILETINY 212 + I++ Sbjct: 188 VLESVIDF 195 >gi|116512007|ref|YP_809223.1| GTPase EngB [Lactococcus lactis subsp. cremoris SK11] gi|125624159|ref|YP_001032642.1| GTPase EngB [Lactococcus lactis subsp. cremoris MG1363] gi|13124218|sp|Q9L6G1|ENGB_LACLM RecName: Full=Probable GTP-binding protein EngB gi|123320395|sp|Q02Z21|ENGB_LACLS RecName: Full=Probable GTP-binding protein EngB gi|7546984|gb|AAF63739.1|AF236863_3 hypothetical GTP-binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|24935311|gb|AAN64304.1| YsxL protein [Lactococcus lactis subsp. cremoris MG1363] gi|116107661|gb|ABJ72801.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11] gi|124492967|emb|CAL97930.1| Probable GTP-binding protein engB [Lactococcus lactis subsp. cremoris MG1363] gi|300070935|gb|ADJ60335.1| ribosome biogenesis GTP-binding protein YsxC [Lactococcus lactis subsp. cremoris NZ9000] Length = 195 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/184 (40%), Positives = 99/184 (53%), Gaps = 11/184 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKN ARTS PG+TQ LNF+ D Sbjct: 21 PENDWPEIALAGRSNVGKSSFINTLLNRKNFARTSGQPGKTQLLNFYNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH + D ++ F Sbjct: 72 QLHFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLKAVVSLVDIRHEPSEDDLMMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V TK DK+ + K ++ T + I SS + GIE Sbjct: 132 LKYYHIPVILVATKADKVPRGKWNKHESIIKKAMKFDST--DDFIIFSSTDKTGIEEAWT 189 Query: 205 AILE 208 AIL+ Sbjct: 190 AILK 193 >gi|182681243|ref|YP_001829403.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa M23] gi|182631353|gb|ACB92129.1| GTP-binding protein HSR1-related [Xylella fastidiosa M23] Length = 219 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 36 LPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTVT--------- 86 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ PK+ W I Y R +LR + +++D RH +K+ D + + Sbjct: 87 PQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQMLA 146 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + Q +LTK DKL +TL+K + + + H + SS R+G+E L Sbjct: 147 YARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQLH 206 Query: 204 KAI 206 I Sbjct: 207 TVI 209 >gi|313887819|ref|ZP_07821499.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846162|gb|EFR33543.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus harei ACS-146-V-Sch2b] Length = 198 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 99/177 (55%), Gaps = 13/177 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P E AF+GRSNVGKSS IN ++NRKNLARTS+ PG+T+ +NF+ D Sbjct: 19 PDTSIKEFAFAGRSNVGKSSFINAMLNRKNLARTSSTPGKTRTINFYKVND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K + W G+I RYL R L LL+D RH +D+ ++ + Sbjct: 70 DLRLVDLPGYGYAKVAKTEKEKWAGIINRYLEHRDNLVETILLVDIRHEPTALDKQMYDY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVKRKGIE 200 + + S ++ TK DK+ + + + + + H E +IP SS K+ ++ Sbjct: 130 IIESGFSGIVIATKKDKIKKSQVDKHIS---VIAKKLGVKHKENIIPFSSSKKDEVK 183 >gi|110807451|ref|YP_690971.1| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 5 str. 8401] gi|30043106|gb|AAP18828.1| hypothetical protein S3811 [Shigella flexneri 2a str. 2457T] gi|56384010|gb|AAN45370.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|110616999|gb|ABF05666.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|332751660|gb|EGJ82059.1| hypothetical protein SF434370_3790 [Shigella flexneri 4343-70] Length = 198 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD-- 60 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 61 -------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 113 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + ++ ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 114 DQQMIEWAVDSNIAVLVLLTKADKLASGARKALLNMVREAVLAF-NGDVQVETFSSLKKQ 172 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 173 GVDKLRQKL 181 >gi|161505499|ref|YP_001572611.1| hypothetical protein SARI_03659 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866846|gb|ABX23469.1| hypothetical protein SARI_03659 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 198 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 3 APDIRHLPSDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVD-- 60 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 61 -------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 113 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + + + ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 114 DQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNIVREAVLAF-NGDVQVEAFSSLKKQ 172 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 173 GVDKLRQKL 181 >gi|294792179|ref|ZP_06757327.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. 6_1_27] gi|294457409|gb|EFG25771.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. 6_1_27] Length = 232 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/187 (43%), Positives = 106/187 (56%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFSNLKN 81 P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+F +D S+ + Sbjct: 43 PEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINYFDIESKEDISDTEE 102 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQ 139 LVD+PGYG+A+ K N + W I Y+ SER L C LLID RH ID+ Sbjct: 103 RRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLC--LLIDGRHPEMAIDK 160 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 F +L + V QIV+TK DKL+ L K L YPTA P ++ SS+K G Sbjct: 161 VAFDWLVEAGVPLQIVVTKADKLTAKEKSANLSIIKEL---YPTATPPIL-YSSLKHTGR 216 Query: 200 EVLRKAI 206 E+L++ I Sbjct: 217 ELLQQRI 223 >gi|187925584|ref|YP_001897226.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia phytofirmans PsJN] gi|238689618|sp|B2T719|ENGB_BURPP RecName: Full=Probable GTP-binding protein EngB gi|187716778|gb|ACD18002.1| GTP-binding protein HSR1-related [Burkholderia phytofirmans PsJN] Length = 217 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEI F+GRSN GKS+ INIL N+K LA S PGRTQH+N+ Sbjct: 10 FFTTVNHLRDLPATSQPEICFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINY--- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K + P LVD+PGYGYA P W L+ YL RS LR + L++D R Sbjct: 67 --FSVGKADEPTAHLVDLPGYGYAEVPGAAKAHWEALLSTYLQTRSQLRGMILMMDSRRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 + +D+ + + +LTK DKL+ + L T+ + Y TA + T Sbjct: 125 LTDLDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVNALRATQKGLAEYRTAGYQGELTAQ 184 Query: 192 --SSVKRKGIEVLRKAI 206 S++KR GI+ + I Sbjct: 185 LFSALKRVGIDEAHELI 201 >gi|73667065|ref|YP_303081.1| GTPase EngB [Ehrlichia canis str. Jake] gi|119369194|sp|Q3YS22|ENGB_EHRCJ RecName: Full=Probable GTP-binding protein EngB gi|72394206|gb|AAZ68483.1| GTP-binding domain [Ehrlichia canis str. Jake] Length = 200 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 111/198 (56%), Gaps = 12/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F+ G + P PEIA +GRSNVGKSSLIN + N K A+TS+ PG T+ +NF+ + Sbjct: 12 FIIGATHVKSFPNFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSRPGCTKQINFYLI 71 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K F M LVD+PGYGY++A + ++++ L+ YL L V LLID + Sbjct: 72 NKSF---------MVLVDLPGYGYSKATRATINNYLFLMEYYLLNSKNLLKVILLIDVKV 122 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 G K+ID D ++L+ + YQ+VLTKID++S + K L + +P VI S Sbjct: 123 GFKEIDLDFINWLELNHIYYQLVLTKIDRVSKEILDVNINYIKNLNLGF-VIYP-VISAS 180 Query: 193 SVKRKGIEVLRKAILETI 210 S ++GI L I + I Sbjct: 181 SKYKQGIGELIYEIAQCI 198 >gi|148284762|ref|YP_001248852.1| GTP-binding protein [Orientia tsutsugamushi str. Boryong] gi|146740201|emb|CAM80484.1| Hypothetical GTP-binding protein [Orientia tsutsugamushi str. Boryong] Length = 186 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 103/192 (53%), Gaps = 13/192 (6%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 G P PE F G+SNVGKSSLIN+L N+ +LAR S PGRT+ +NFF+ + Sbjct: 3 GASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKHSLARVSKTPGRTREINFFLIAN- 61 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + LVD+PGYGY++ +W LI+ YL +R LR +Y+LID R G+K Sbjct: 62 --------KLILVDLPGYGYSKTAVVTCKNWEKLILSYLEDRKNLRLIYVLIDARRGIKD 113 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D V + + + +IV TK DK+S + +K L+ + ++I TS + Sbjct: 114 NDLAVINLVHHFNYTMKIVFTKEDKISDLEKNSLIATSKNLL----DYNDKIIFTSIRNK 169 Query: 197 KGIEVLRKAILE 208 G + ++ IL+ Sbjct: 170 NGTQEIQYNILK 181 >gi|197364777|ref|YP_002144414.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197096254|emb|CAR61852.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|261249117|emb|CBG26978.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301160509|emb|CBW20039.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 199 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 4 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVD-- 61 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 62 -------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 114 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + + + ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 115 DQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSSLKKQ 173 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 174 GVDKLRQKL 182 >gi|322421712|ref|YP_004200935.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M18] gi|320128099|gb|ADW15659.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M18] Length = 211 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/151 (45%), Positives = 93/151 (61%), Gaps = 11/151 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F++ P+ PEIAF+GRSNVGKSSL+N+LVNRK+L RTS+ PGRTQ +NFF V Sbjct: 8 FIKSATRPAHYPEGNLPEIAFAGRSNVGKSSLVNVLVNRKSLVRTSSTPGRTQLINFFQV 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 DF LVD+PGYGYA+ P W ++ YL++R+ LR V L++D R Sbjct: 68 NDDF----------MLVDLPGYGYAKVPLAVKKDWRPMMETYLAKRANLRGVVLILDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 + D + ++L +V IV+TK DKLS Sbjct: 118 VPNEDDLQMLAWLRAYSVPPIIVVTKCDKLS 148 >gi|206575834|ref|YP_002241256.1| putative GTP-binding protein EngB [Klebsiella pneumoniae 342] gi|288937895|ref|YP_003441954.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella variicola At-22] gi|290513118|ref|ZP_06552481.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. 1_1_55] gi|238058986|sp|B5XZJ3|ENGB_KLEP3 RecName: Full=Probable GTP-binding protein EngB gi|206564892|gb|ACI06668.1| putative GTP-binding protein EngB [Klebsiella pneumoniae 342] gi|288892604|gb|ADC60922.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella variicola At-22] gi|289774500|gb|EFD82505.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. 1_1_55] Length = 210 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ P++ W + YL +R L+ + +L+D RH Sbjct: 71 AE---------GKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + + + + + +V P SS Sbjct: 122 LKDLDQQMIEWAVESDIQVLVLLTKADKLASGARKAQVNMVREAVLAF-NGDIQVEPFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 181 LKKSGVDKLRQKL 193 >gi|153854550|ref|ZP_01995820.1| hypothetical protein DORLON_01815 [Dorea longicatena DSM 13814] gi|149752859|gb|EDM62790.1| hypothetical protein DORLON_01815 [Dorea longicatena DSM 13814] Length = 196 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/175 (40%), Positives = 103/175 (58%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ N Sbjct: 18 LPENTLPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGYA+ ++ WG LI RYL L+ V+LLID RH D+ ++ Sbjct: 69 EELYLVDLPGYGYAKVSEQEKIKWGQLIERYLHGSKQLKVVFLLIDIRHKPSGNDKMMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ + + I+ TK+DK+ + + ++ K + P VIP SSV ++G Sbjct: 129 WIVSQGFNPVIIATKLDKIKRSQKDKQIKIVKEGLGVLPGTI--VIPFSSVTKQG 181 >gi|138896215|ref|YP_001126668.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus thermodenitrificans NG80-2] gi|196250171|ref|ZP_03148865.1| small GTP-binding protein [Geobacillus sp. G11MC16] gi|166225956|sp|A4IRG9|ENGB_GEOTN RecName: Full=Probable GTP-binding protein EngB gi|134267728|gb|ABO67923.1| GTP-binding protein-like protein [Geobacillus thermodenitrificans NG80-2] gi|196210355|gb|EDY05120.1| small GTP-binding protein [Geobacillus sp. G11MC16] Length = 195 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P +G PE+A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PDSGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYLIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+AR K+ WG ++ Y + R TL+ LL+D RH + D ++ F Sbjct: 70 SFYFVDVPGYGFARVSKQERQKWGKMMETYFTTRETLKAALLLVDLRHPPTKDDVMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 + ++ TK DK+ Sbjct: 130 FKHYEIPVIVIATKADKV 147 >gi|238018910|ref|ZP_04599336.1| hypothetical protein VEIDISOL_00770 [Veillonella dispar ATCC 17748] gi|237864394|gb|EEP65684.1| hypothetical protein VEIDISOL_00770 [Veillonella dispar ATCC 17748] Length = 232 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/187 (42%), Positives = 107/187 (57%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFSNLKN 81 P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+F +D S + Sbjct: 43 PEGDTVEIAFIGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINYFDVESKEDISETEE 102 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQ 139 LVD+PGYG+A+ K N + W I Y+ SER L C LLID RH ID+ Sbjct: 103 RRYHWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLC--LLIDGRHPEMPIDK 160 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + +L + V QIV+TK+DKL TA+E + YPTA P ++ SS+K G Sbjct: 161 VAYDWLVEAGVPLQIVVTKVDKL---TAKEKSANLAIIKEMYPTATPPIL-YSSLKHTGR 216 Query: 200 EVLRKAI 206 E+L++ I Sbjct: 217 ELLQQRI 223 >gi|254494964|ref|ZP_01052919.2| GTPase of unknown function [Polaribacter sp. MED152] gi|213690546|gb|EAQ42347.2| GTPase of unknown function [Polaribacter sp. MED152] Length = 194 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 100/189 (52%), Gaps = 17/189 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE AF GRSNVGKSSLIN+L+ RK+LA+ S PG+TQ +N F D Sbjct: 10 PKDRIPEYAFIGRSNVGKSSLINMLMERKDLAKISGKPGKTQLINHFKIND--------- 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK + I Y ER L C ++LID RH ++ID D F Sbjct: 61 NWFLVDLPGYGYAQVSKKKRVIFQYFIENYFKEREQLVCTFVLIDSRHDPQKIDLDFMRF 120 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + + + +V TK DKL S Q T K K L H E +P + + + Sbjct: 121 LGENQIPFCLVFTKADKLGSSKLNKQITSYKKKLL------QHWETLPMTFLTSSSTGLG 174 Query: 203 RKAILETIN 211 RK L+ I+ Sbjct: 175 RKEFLDFID 183 >gi|164686710|ref|ZP_02210738.1| hypothetical protein CLOBAR_00305 [Clostridium bartlettii DSM 16795] gi|164604100|gb|EDQ97565.1| hypothetical protein CLOBAR_00305 [Clostridium bartlettii DSM 16795] Length = 207 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 102/187 (54%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA GRSNVGKSS +N L+NR+N ARTS PG+T+ +NF+ L NN Sbjct: 23 PAEGLPEIALVGRSNVGKSSCVNALLNRRNFARTSQTPGKTRTINFY-------LINN-- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K D WG ++ YL +R L ++LL+D RH D ++ + Sbjct: 74 EFYFVDLPGYGYAKVAKSEKDKWGNIMETYLGDREELCAIFLLVDIRHEPTNDDVMMYEW 133 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + ++ TK DK+S Q+ + + ++ ++IP SS K+ G+E + Sbjct: 134 IKHFGYECVVIATKADKISRGQYQKHMSIIRKKLQ--LEKDEKIIPLSSSKKTGVEDVWN 191 Query: 205 AILETIN 211 ++ N Sbjct: 192 EMVSQYN 198 >gi|315633423|ref|ZP_07888714.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter segnis ATCC 33393] gi|315477923|gb|EFU68664.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter segnis ATCC 33393] Length = 204 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSSPNLKSLPEDSGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 124 LKDLDQQMIEWAVASKLPVLLLLTKADKLSQSERSKQVKMVREAILPF-QGDIQVEAFSA 182 Query: 194 VKRKGIEVL 202 +KR GI+ L Sbjct: 183 LKRTGIDRL 191 >gi|304382687|ref|ZP_07365181.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella marshii DSM 16973] gi|304336312|gb|EFM02554.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella marshii DSM 16973] Length = 202 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 102/189 (53%), Gaps = 9/189 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P + P PE AF GRSNVGKSSLIN+L N KNLA+TS PG+T +N F+ Sbjct: 8 FVISSPTVQKCPADTKPEYAFIGRSNVGKSSLINMLCNHKNLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K +I Y+ +R L V++LID RH Sbjct: 68 NN---------EWYLVDLPGYGYAKRSKTVQQQLSRMITSYILQRKQLINVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +Q D++ +L + ++ + IV TK DKL A++ +E +++ P TS+ Sbjct: 119 AQQNDREFIDWLGESSIPFAIVFTKADKLGAVKARQNVEAYMNALKDRWEELPPYFITSA 178 Query: 194 VKRKGIEVL 202 KR G + L Sbjct: 179 EKRTGRDEL 187 >gi|303229336|ref|ZP_07316126.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica ACS-134-V-Col7a] gi|303231340|ref|ZP_07318074.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica ACS-049-V-Sch6] gi|302513936|gb|EFL55944.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica ACS-049-V-Sch6] gi|302515872|gb|EFL57824.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica ACS-134-V-Col7a] Length = 232 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/187 (42%), Positives = 106/187 (56%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFSNLKN 81 P+ E+AF GRSNVGKSSLIN L N + LA S PG+T+ +N+F +D S + Sbjct: 43 PEGDTVEVAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINYFDIESKEDISETEE 102 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQ 139 LVD+PGYG+A+ K N + W I Y+ SER L C LLID RH ID+ Sbjct: 103 RRYHWFLVDLPGYGFAKTNKDNRNMWSSFISDYILHSERLMLLC--LLIDGRHPEMPIDK 160 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 F +L + V QIV+TK+DKL+ L K K + YPT P ++ SS+K G Sbjct: 161 VAFDWLVEAGVPLQIVVTKVDKLNAKEKSVNLAKVKAM---YPTDSPPIM-YSSLKHTGR 216 Query: 200 EVLRKAI 206 E+L++ I Sbjct: 217 ELLQQRI 223 >gi|295677901|ref|YP_003606425.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1002] gi|295437744|gb|ADG16914.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1002] Length = 220 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 100/187 (53%), Gaps = 9/187 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+ FS K +L Sbjct: 20 LPATAQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINY-----FSVGKADL 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 PA LVD+PGYGYA P W L+ YL RS LR + L++D R + +D+ + Sbjct: 75 PAGYLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMILMMDSRRPLTDLDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPT--SSVKRKGI 199 + +LTK DKL+ + L + + Y A E+ S++KR G+ Sbjct: 135 WFAPTGKPIHTLLTKCDKLTRQESTNALRTAQKGLAEYRAAGYRGELSAQLFSALKRTGL 194 Query: 200 EVLRKAI 206 + + I Sbjct: 195 DEAHELI 201 >gi|224145468|ref|XP_002325653.1| predicted protein [Populus trichocarpa] gi|222862528|gb|EEF00035.1| predicted protein [Populus trichocarpa] Length = 305 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 12/184 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P G PEIAF+GRSNVGKSSL+N L + +ARTS+ PG TQ +NFF L Sbjct: 124 FPPPGLPEIAFAGRSNVGKSSLLNSLTRQWGVARTSDKPGLTQTINFF----------EL 173 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYG+A A ++ DSW L+ Y+S R L+ V LLID + G+K D+++ Sbjct: 174 GNVCLVDLPGYGFAYAKEEVKDSWEELVKEYVSMRVNLKRVCLLIDTKWGMKPRDRELID 233 Query: 144 FLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ YQ+V+TK D + P A+ ++ + L N P V+ SS GI + Sbjct: 234 LMERYQTKYQVVMTKTDLVFPIDVARRAMQIEESLKANKSLVQP-VMMVSSKSGAGIRSV 292 Query: 203 RKAI 206 R + Sbjct: 293 RTVL 296 >gi|225011603|ref|ZP_03702041.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-2A] gi|225004106|gb|EEG42078.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-2A] Length = 205 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 107/199 (53%), Gaps = 14/199 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P + PE AF GRSNVGKSSLIN L N+KNLA+TS+ PG+TQ +N F+ Sbjct: 8 FVISNSDVAKCPNSHLPEYAFIGRSNVGKSSLINALCNKKNLAKTSSRPGKTQLINHFL- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N LVD+PG+GYAR K + + Y ER L +LLID RH Sbjct: 67 -----INQN---WHLVDLPGFGYARVSKTQKKVFQKFVTNYFKERKQLVNAFLLIDIRHD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 + ID + +L + + + I+ TK DKL P + ++ T+ ++ P + TS Sbjct: 119 PQPIDMNFMEWLGENQIPFSIIFTKADKLKPAARERNIKAYTEKMLATLWEELPPIFITS 178 Query: 193 SVKRKGIEVLRKAILETIN 211 S+ + G E ILE I+ Sbjct: 179 SLHKTGGE----EILEYIH 193 >gi|307128782|ref|YP_003880798.1| GTP-binding protein [Dickeya dadantii 3937] gi|306526311|gb|ADM96241.1| GTP-binding protein [Dickeya dadantii 3937] Length = 275 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 73 FVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 132 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 133 AD---------GVRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRDCLKGLVVLMDIRHP 183 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 184 LKDLDQQMLEWAVDVGLPVLVLLTKADKLAQGARKSQLNMVREAVLPF-MGDIQVEAFSS 242 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 243 LKKTGVDKLRQKL 255 >gi|238921710|ref|YP_002935225.1| ribosome biogenesis GTP-binding protein YsxC [Edwardsiella ictaluri 93-146] gi|259645894|sp|C5BC84|ENGB_EDWI9 RecName: Full=Probable GTP-binding protein EngB gi|238871279|gb|ACR70990.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 217 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPEDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 73 ED---------GIRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRQCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ + + ++LTK DKL+ + L + + + +V SS Sbjct: 124 LKDLDQQMIAWAVEVGLPVLLLLTKADKLASGARKAQLNMVREAVLPF-MGDIQVDAFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR + Sbjct: 183 LKKFGVDKLRDKL 195 >gi|329296747|ref|ZP_08254083.1| GTP-binding protein YsxC [Plautia stali symbiont] Length = 213 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 16/196 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FMLSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLF-- 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 69 -------EVVEGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRQALKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA---HPEVIP 190 +K +DQ + + + + I+LTK DKL+ + L ++R A +V Sbjct: 122 LKDLDQQMVEWAGQSGIPVMILLTKADKLTSGARKAQLN----MVREASLAFMGDVQVEM 177 Query: 191 TSSVKRKGIEVLRKAI 206 SS+K+ G++ LR+ + Sbjct: 178 FSSLKKLGVDKLRQKL 193 >gi|269140842|ref|YP_003297543.1| GTPase [Edwardsiella tarda EIB202] gi|267986503|gb|ACY86332.1| GTPase [Edwardsiella tarda EIB202] gi|304560601|gb|ADM43265.1| GTP-binding protein EngB [Edwardsiella tarda FL6-60] Length = 217 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 73 ED---------GIRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRQCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ + + ++LTK DKL+ + L + + + +V SS Sbjct: 124 LKDLDQQMIAWAVEAGLPVLLLLTKADKLASGARKAQLNMVREAVLPF-MGDIQVDAFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR + Sbjct: 183 LKKFGVDKLRDKL 195 >gi|322835074|ref|YP_004215101.1| ribosome biogenesis GTP-binding protein YsxC [Rahnella sp. Y9602] gi|321170275|gb|ADW75974.1| ribosome biogenesis GTP-binding protein YsxC [Rahnella sp. Y9602] Length = 216 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVMSAPDIRHLPSDAGIEVAFAGRSNAGKSSALNTLTQQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K P + LVD+PGYGYA P++ W + YL R++L+ + +L+D RH Sbjct: 73 K---------PGIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNSLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++LTK DKL+ Q ++ + ++ + +V SS Sbjct: 124 LKDLDQQMIQWAVDVGTPVMLLLTKADKLASGARQAQIKMVREAVKEF-MGDIQVEAFSS 182 Query: 194 VKRKGIEVL 202 K+ G++ L Sbjct: 183 PKKMGVDKL 191 >gi|317502810|ref|ZP_07960914.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella salivae DSM 15606] gi|315666082|gb|EFV05645.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella salivae DSM 15606] Length = 198 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 106/195 (54%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P + + PK PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FVISAPTVSMCPKDDKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NN LVD+PGYG+A+ K +I Y+ +R + V++LID RH Sbjct: 68 -------NN--EWYLVDLPGYGFAKRSKTVQQKLEQMIASYILQRKQMVNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + V + IV TK DKL A++ +K +++ P TSS Sbjct: 119 QQKIDREFIDWLGESNVPFTIVFTKADKLGAGKAKQNAQKWMNQLKDRWETLPPYFITSS 178 Query: 194 VKRKGIEVLRKAILE 208 K+ G + L I E Sbjct: 179 EKKLGRDELLDYIDE 193 >gi|304415126|ref|ZP_07395853.1| GTPase [Candidatus Regiella insecticola LSR1] gi|304283022|gb|EFL91458.1| GTPase [Candidatus Regiella insecticola LSR1] Length = 228 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 34 FISSAPDIHHLPAYEGIEIAFAGRSNAGKSSALNALTHKKGLARTSKTPGRTQLINLFEV 93 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA K+ + W + YL++R L+ + +L+D RH Sbjct: 94 AD---------GKRLVDLPGYGYAAVKKEIKNQWQHALNDYLNKRDCLKGLVVLMDIRHP 144 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ DQ + S + ++LTK DKL+ + A+ L K + + + +V SS Sbjct: 145 LKESDQQMISLAVAVDIPIFLLLTKADKLATSAAKTQLNKVREAVLPF-MGDIQVEKFSS 203 Query: 194 VKRKGIEVLR 203 +K+ G++ LR Sbjct: 204 LKKTGVDKLR 213 >gi|254282215|ref|ZP_04957183.1| GTP-binding protein EngB [gamma proteobacterium NOR51-B] gi|219678418|gb|EED34767.1| GTP-binding protein EngB [gamma proteobacterium NOR51-B] Length = 229 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 10/194 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ ++ P E+AF+GRSN GKSS IN L K LARTS PGRTQ +N+F Sbjct: 20 VFLQSASQLENSPDDSGSEVAFAGRSNSGKSSAINTLTGNKKLARTSRTPGRTQLINYF- 78 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + P LVD+PGYGYA+ P + W + RYL R +LR + LL+D RH Sbjct: 79 --------DVGPDRRLVDLPGYGYAKVPLAMKEKWNRELERYLQHRQSLRGLVLLMDIRH 130 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++ D + ++ ++ I+LTK DKL AQ TL K + + ++ V S Sbjct: 131 PMRDQDDQMINWAATASMPVHILLTKADKLKRGPAQNTLLKLQGQLASF-GGLISVQLFS 189 Query: 193 SVKRKGIEVLRKAI 206 ++K++G++ L K + Sbjct: 190 ALKKQGLDSLEKTL 203 >gi|15838031|ref|NP_298719.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa 9a5c] gi|9106445|gb|AAF84239.1|AE003973_7 GTP-binding protein [Xylella fastidiosa 9a5c] Length = 229 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 46 LPADDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTVT--------- 96 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ PK+ W I Y +R LR + +++D RH +K+ D + + Sbjct: 97 PQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHPLKEYDLQMLA 156 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + Q +LTK DKL +TL+K + + + H + SS R+G+E L Sbjct: 157 YARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQLH 216 Query: 204 KAI 206 I Sbjct: 217 TVI 219 >gi|15673134|ref|NP_267308.1| GTPase EngB [Lactococcus lactis subsp. lactis Il1403] gi|281491648|ref|YP_003353628.1| GTP-binding protein EngB [Lactococcus lactis subsp. lactis KF147] gi|18202795|sp|Q9CGE5|ENGB_LACLA RecName: Full=Probable GTP-binding protein EngB gi|12724115|gb|AAK05250.1|AE006347_8 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403] gi|281375366|gb|ADA64879.1| GTP-binding protein EngB [Lactococcus lactis subsp. lactis KF147] gi|326406699|gb|ADZ63770.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 195 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/138 (46%), Positives = 82/138 (59%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKN ARTS PG+TQ LNF+ D Sbjct: 21 PENDWPEIALAGRSNVGKSSFINTLLNRKNFARTSGQPGKTQLLNFYNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH + D ++ F Sbjct: 72 QLHFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLKAVVSLVDIRHEPSEDDLMMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TK DK+ Sbjct: 132 LKYYHIPVILVATKADKV 149 >gi|225868472|ref|YP_002744420.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus] gi|259645907|sp|C0MEW6|ENGB_STRS7 RecName: Full=Probable GTP-binding protein EngB gi|225701748|emb|CAW99123.1| putative GTP-binding protein [Streptococcus equi subsp. zooepidemicus] Length = 199 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/184 (42%), Positives = 99/184 (53%), Gaps = 11/184 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RK+LARTS+ PG+TQ LNFF D Sbjct: 25 PQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K WG +I YL+ R LR V L+D RH Q D ++ F Sbjct: 76 KLRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHEPSQDDIQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ P E N+ +I SSV+R GI+ Sbjct: 136 LKYYEIPVIIVATKADKV-PRGRWNKHESMVKKSLNFDQTDAFII-FSSVERIGIDESWD 193 Query: 205 AILE 208 ILE Sbjct: 194 TILE 197 >gi|288927638|ref|ZP_06421485.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 317 str. F0108] gi|288330472|gb|EFC69056.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 317 str. F0108] Length = 201 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 102/195 (52%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P I L P E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTLSAPSIRLCPTDNKIEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+A+ K +I Y+ +R L +++LID RH Sbjct: 68 ND---------SWYLVDLPGYGFAKRSKTVQQKLQQMISSYILQREQLVNLFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + V + IV TK DKL A++ EK + + P TSS Sbjct: 119 QQKIDREFIDWLGESGVPFTIVFTKADKLGLVKAKQNAEKWMKQLEDSWEELPPYFITSS 178 Query: 194 VKRKGIEVLRKAILE 208 KR G E L I E Sbjct: 179 EKRIGREELLNYIDE 193 >gi|323345334|ref|ZP_08085557.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oralis ATCC 33269] gi|323093448|gb|EFZ36026.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oralis ATCC 33269] Length = 199 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/197 (38%), Positives = 105/197 (53%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P IG P PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FVISAPTIGKCPNDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NN LVD+PGYG+A+ K +I Y+ +R L V++LID RH Sbjct: 68 -------NN--EWYLVDLPGYGFAKRSKSVQKQLQQMISSYILQREQLANVFVLIDIRHD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ID++ +L + ++ + I TK DKL A++ EK +++ P TS+ Sbjct: 119 PMTIDREFIDWLGESSIPFAIAFTKADKLGLVKARQNAEKWMKTLQDRWETLPPYFITSA 178 Query: 194 VKRKGIEVLRKAILETI 210 K++G R ILE I Sbjct: 179 EKKQG----RDEILEYI 191 >gi|315650625|ref|ZP_07903685.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium saburreum DSM 3986] gi|315487122|gb|EFU77444.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium saburreum DSM 3986] Length = 197 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/177 (38%), Positives = 100/177 (56%), Gaps = 15/177 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEI F+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +N++ D Sbjct: 18 FPDNSEPEIVFAGKSNVGKSSLINALMNRKSLARTSGKPGKTQTINYYKVND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYGYA A + WG +I RYL ++C++LLID RH + D+ ++ Sbjct: 70 -EIYFVDLPGYGYANANLATREKWGKMIERYLHTSKQIKCIFLLIDIRHEPGKNDKQMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPTSSVKRKG 198 ++ S I+ TK+DKL + + ++ +R EV IP SS ++G Sbjct: 129 WIVYNGYSPVIIATKLDKLKRSQIAKCIK----TLREGLGLQKEVVLIPFSSETKQG 181 >gi|195978195|ref|YP_002123439.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974900|gb|ACG62426.1| probable GTP-binding protein EngB [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 200 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/186 (41%), Positives = 101/186 (54%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RK+LARTS+ PG+TQ LNFF D Sbjct: 26 PQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSSKPGKTQLLNFFNVDD--------- 76 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K WG +I YL+ R LR V L+D RH Q D ++ F Sbjct: 77 KLRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQNLRAVVSLVDFRHEPSQDDIQMYEF 136 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + IV TK DK+ E++ K N+ +I SSV+R GI+ Sbjct: 137 LKYYEIPVIIVATKADKVLRGRWNKHESMVKKSL---NFDRTDAFII-FSSVERIGIDES 192 Query: 203 RKAILE 208 ILE Sbjct: 193 WDTILE 198 >gi|88811280|ref|ZP_01126536.1| GTP-binding protein [Nitrococcus mobilis Nb-231] gi|88791819|gb|EAR22930.1| GTP-binding protein [Nitrococcus mobilis Nb-231] Length = 254 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 12/189 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP E+AF+GRSN GKSS IN L +K LARTS PGRTQ +N F Sbjct: 51 FLLSAPDLRHLPPDTGREVAFAGRSNAGKSSAINTLTGQKALARTSKTPGRTQQINVFPV 110 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L+D+PGYG+A+ P+ W + YL R +LR + L++D RH Sbjct: 111 SD---------QRYLIDLPGYGFAKLPQAIRAHWQRTLPEYLQRRRSLRGLMLIMDVRHP 161 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPTS 192 + +DQ + ++ + ++LTK DKL A + L T + L R++P ++ S Sbjct: 162 LTALDQQLLAWCGAVGLPVHVLLTKADKLKQGPAAQALRHTAECLARDHPDTSVQLF--S 219 Query: 193 SVKRKGIEV 201 +++ +GIE Sbjct: 220 ALRARGIET 228 >gi|261866835|ref|YP_003254757.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412167|gb|ACX81538.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 204 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 124 LKDLDQQMIEWAVASQLPVLLLLTKADKLSQSERSKQMKMVREAILPF-RGDIQVEAFSA 182 Query: 194 VKRKGIEVL 202 +KR GI+ L Sbjct: 183 LKRTGIDRL 191 >gi|322385236|ref|ZP_08058883.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus cristatus ATCC 51100] gi|321270860|gb|EFX53773.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus cristatus ATCC 51100] Length = 195 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 78/188 (41%), Positives = 99/188 (52%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF N+ + L Sbjct: 21 PQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFF------NIDDKL- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ R LR V L+D RH D ++ F Sbjct: 74 --RFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRDNLRAVVSLVDLRHDPSADDVQMYEF 131 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K + I SSV + G++ Sbjct: 132 LKYYEIPVIVVATKADKIPRGKWNKHESAIKKKLDF----DKTDDFIIFSSVDKTGLDQA 187 Query: 203 RKAILETI 210 AIL I Sbjct: 188 WDAILGKI 195 >gi|157147356|ref|YP_001454675.1| hypothetical protein CKO_03149 [Citrobacter koseri ATCC BAA-895] gi|157084561|gb|ABV14239.1| hypothetical protein CKO_03149 [Citrobacter koseri ATCC BAA-895] Length = 198 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 3 APDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLF------ 56 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 57 ---EVVEGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 113 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + + + ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 114 DQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLKKQ 172 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 173 GVDKLRQKL 181 >gi|205354414|ref|YP_002228215.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859194|ref|YP_002245845.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205274195|emb|CAR39213.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710997|emb|CAR35365.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 199 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 APDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLF------ 57 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K + Sbjct: 58 ---EVVEGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDL 114 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + + + ++LTK DKL+ + L + + + +V SS+K++ Sbjct: 115 DQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSSLKKQ 173 Query: 198 GIEVLRKAI 206 G++ LR+ + Sbjct: 174 GVDKLRQKL 182 >gi|256823704|ref|YP_003147667.1| GTP-binding protein HSR1-like [Kangiella koreensis DSM 16069] gi|256797243|gb|ACV27899.1| GTP-binding protein HSR1-related [Kangiella koreensis DSM 16069] Length = 207 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 105/190 (55%), Gaps = 12/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L G ++ LP E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 8 YLLGAAKLTQLPDDQGIEVAFAGRSNAGKSSALNTLTQQKSLARTSKTPGRTQLINVFTL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L +D+PGYGYA+ P+ W + RYL +R LR + LL+D RH Sbjct: 68 DDDRRL---------IDLPGYGYAKVPEAMKLQWQAELSRYLQQRKCLRGLVLLMDIRHF 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +K DQ++ + + + +L+K DKLS ++ L+ K L +P A + S Sbjct: 119 LKDSDQEMLVWAAEVGLPVHCLLSKSDKLSQGAKSKAVLQCKKALSELHPKATVQAF--S 176 Query: 193 SVKRKGIEVL 202 S+KR G++ L Sbjct: 177 SLKRVGLDQL 186 >gi|325981834|ref|YP_004294236.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas sp. AL212] gi|325531353|gb|ADZ26074.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas sp. AL212] Length = 198 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/186 (41%), Positives = 99/186 (53%), Gaps = 12/186 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LPK EIAFSGRSN GKSS IN L NR LA S PGRTQ +NFF L +N Sbjct: 19 LPKHSGIEIAFSGRSNAGKSSAINALTNRNRLAFVSKTPGRTQLINFF------QLASN- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ P+ W L+ YL R++LR + L++D RH +K D + Sbjct: 72 --QFLVDLPGYGYAKVPEHVRLHWKNLLSNYLQTRNSLRGLILVMDIRHPLKPQDIQMLD 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-YPTAHPEVIPTSSVKRKGIEVL 202 + I+LTK DKLS A TL+K I+ YP ++ SS+ G++ Sbjct: 130 WFSSTGKVIHILLTKADKLSKQQANITLQKVALFIKEFYPQCSVQLF--SSITNIGVDDA 187 Query: 203 RKAILE 208 I E Sbjct: 188 MTVITE 193 >gi|239827921|ref|YP_002950545.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. WCH70] gi|259645899|sp|C5D5L1|ENGB_GEOSW RecName: Full=Probable GTP-binding protein EngB gi|239808214|gb|ACS25279.1| small GTP-binding protein [Geobacillus sp. WCH70] Length = 193 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/148 (41%), Positives = 88/148 (59%), Gaps = 9/148 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ + Sbjct: 19 PDGALPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYLINE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+AR KK ++WG ++ Y + R LR V L++D RH + D ++ F Sbjct: 70 SFYFVDVPGYGFARVSKKEREAWGKMMETYFTTREQLRAVVLIVDLRHPPTKDDVMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLE 172 L + I+ TK DK+ Q+ L+ Sbjct: 130 LKHYQIPTIIIATKADKVPKGKWQKHLK 157 >gi|229828302|ref|ZP_04454371.1| hypothetical protein GCWU000342_00360 [Shuttleworthia satelles DSM 14600] gi|229792896|gb|EEP29010.1| hypothetical protein GCWU000342_00360 [Shuttleworthia satelles DSM 14600] Length = 204 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 102/177 (57%), Gaps = 11/177 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LPK PE+AF+GRSNVGKSSLIN L+NRK+ ARTS+ PG+TQ +N++ D Sbjct: 19 LPKNQLPEVAFAGRSNVGKSSLINALMNRKSYARTSSQPGKTQTINYYRIND-------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYG+AR ++ ++WG +I +YL L V+LL+D RH D+ +F Sbjct: 71 -QIYCVDLPGYGFARVSREEKEAWGKMIEKYLVTSEQLAAVFLLLDIRHRPNANDKQMFD 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ ++ TK DK+ + L + K ++ +IP S++ ++G E Sbjct: 130 WIQYMGYQAIVIATKADKIKRSQIPGQLRQMKEELK--ADEDTIIIPFSALTKQGRE 184 >gi|269798315|ref|YP_003312215.1| GTP-binding protein HSR1-related protein [Veillonella parvula DSM 2008] gi|269094944|gb|ACZ24935.1| GTP-binding protein HSR1-related protein [Veillonella parvula DSM 2008] Length = 232 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 81/187 (43%), Positives = 105/187 (56%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFSNLKN 81 P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+F +D S + Sbjct: 43 PEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINYFDIESKEDISETEE 102 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQ 139 LVD+PGYG+A+ K N + W I Y+ SER L C LLID RH ID+ Sbjct: 103 RRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLC--LLIDGRHPEMAIDK 160 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 F +L + V QIV+TK DKL+ L K L YPTA P ++ SS+K G Sbjct: 161 VAFDWLVEAGVPLQIVVTKADKLTAKEKSVNLSIIKEL---YPTATPPIL-YSSLKHTGR 216 Query: 200 EVLRKAI 206 E+L++ I Sbjct: 217 ELLQQRI 223 >gi|193215228|ref|YP_001996427.1| ribosome biogenesis GTP-binding protein YsxC [Chloroherpeton thalassium ATCC 35110] gi|238692681|sp|B3QS35|ENGB_CHLT3 RecName: Full=Probable GTP-binding protein EngB gi|193088705|gb|ACF13980.1| GTP-binding protein HSR1-related [Chloroherpeton thalassium ATCC 35110] Length = 193 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 101/185 (54%), Gaps = 13/185 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + V + LPK G PEIAF+GRSNVGKSSL+N L+ +K+LAR S PG+T+ +NFF+ Sbjct: 8 FYKSVTRLEDLPKDGLPEIAFAGRSNVGKSSLMNTLMGKKDLARASATPGKTREINFFLV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 VD+PGYG+A+ K ++W L+ YL R+ L+ + LLID RH Sbjct: 68 NG---------KYYFVDLPGYGFAKVSKSLQENWQQLMEGYLKSRAELKLIVLLIDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ID ++ FL + IV TK DKL+ Q L K+K ++ SS Sbjct: 119 ALPIDLEMNEFLSFFGRRFAIVRTKTDKLN----QSALAKSKRESEKAFYDFEFIMDFSS 174 Query: 194 VKRKG 198 V KG Sbjct: 175 VTGKG 179 >gi|319953730|ref|YP_004164997.1| gtp-binding protein engb [Cellulophaga algicola DSM 14237] gi|319422390|gb|ADV49499.1| GTP-binding protein engB [Cellulophaga algicola DSM 14237] Length = 208 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 98/175 (56%), Gaps = 10/175 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE AF GRSNVGKSSLIN+L ++K+LA+TS PG+TQ +N F D Sbjct: 19 PKEAIPEYAFIGRSNVGKSSLINMLTDKKSLAKTSGRPGKTQLINHFKIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR K++ ++ I Y ER L ++L+D RH +++D + + Sbjct: 70 SWYLVDLPGYGYARVSKRDKKTFQRYITDYFRERKQLVSAFVLVDIRHEPQKVDLEFLEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKG 198 + + + + IV TK DKL P + ++ +L+ + P TS+ K G Sbjct: 130 MGENQIPFSIVFTKADKLKPNVIERNVQTYIDHLLESMWQEAPNYFITSASKNIG 184 >gi|120437113|ref|YP_862799.1| ribosome biogenesis GTP-binding protein YsxC [Gramella forsetii KT0803] gi|166225957|sp|A0M537|ENGB_GRAFK RecName: Full=Probable GTP-binding protein EngB gi|117579263|emb|CAL67732.1| protein containing GTP binding domain [Gramella forsetii KT0803] Length = 198 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 99/185 (53%), Gaps = 9/185 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P + PE AF GRSNVGKSSLIN+L RK+LA+TS PG+TQ +N F+ Sbjct: 8 FVISNSKVDHCPNSTLPEYAFIGRSNVGKSSLINMLTGRKSLAKTSAKPGKTQLINHFL- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + NN LVD+PGYGYA+ K + I Y +R + C ++LID RH Sbjct: 67 -----INNNW---HLVDLPGYGYAQVSKSTKKVFQKFITAYFKKREQMICAFVLIDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ID + +L + + + I+ TK DKL P + +E K + PE TS+ Sbjct: 119 PQPIDMEFMQWLGEHNIPFCIIFTKADKLKPKILDKNIENYKNEMLESWVEMPEYFITSA 178 Query: 194 VKRKG 198 + G Sbjct: 179 TSKLG 183 >gi|86159103|ref|YP_465888.1| ribosome biogenesis GTP-binding protein YsxC [Anaeromyxobacter dehalogenans 2CP-C] gi|119368789|sp|Q2ILB9|ENGB_ANADE RecName: Full=Probable GTP-binding protein EngB gi|85775614|gb|ABC82451.1| GTP-binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 216 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 92/176 (52%), Gaps = 3/176 (1%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIAF GRSNVGKSS++N L RK LAR S+ PGRT+ L FF Sbjct: 21 PRGATPEIAFVGRSNVGKSSMLNALARRKGLARVSSTPGRTRALQFFDLSYRPTPAARPR 80 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ D+PGYGYA+ + D W +I YL +R LR V L++D RH + D+D +F Sbjct: 81 AIRFCDLPGYGYAKVSRAERDRWTAMIEDYLRDRDVLRAVVLIVDARHAPSESDEDAAAF 140 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L + TK DKL L++ + R A + +P S+V+ G + Sbjct: 141 LVSAGRRLVVAATKTDKLPKARRVLALQQVE---RALGLARGDAVPFSAVEGTGTD 193 >gi|226942008|ref|YP_002797082.1| ribosome biogenesis GTP-binding protein YsxC [Laribacter hongkongensis HLHK9] gi|254783201|sp|C1D5Q6|ENGB_LARHH RecName: Full=Probable GTP-binding protein EngB gi|226716935|gb|ACO76073.1| engB, yihA, ysxC [Laribacter hongkongensis HLHK9] Length = 222 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 99/181 (54%), Gaps = 12/181 (6%) Query: 29 PP---EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 PP EIAF GRSN GKSS IN L NR LA S PGRTQH+NFF L ++ Sbjct: 20 PPTSAEIAFVGRSNAGKSSAINALANRTRLAYVSKTPGRTQHINFF------RLASHFDY 73 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD+PGYGYA P+ W L+ RYL R +L + L++D RH +K++D + F Sbjct: 74 F-LVDLPGYGYAEVPESVRAHWVELLGRYLQTRESLIGLLLIMDARHPLKELDMRMLDFF 132 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+L+K DK++ +TL + + YP ++ SS K++G+E + Sbjct: 133 RMRGQPVHILLSKSDKMNRQEQNKTLATVRQALAGYPQVSIQLF--SSSKKQGLEQVETV 190 Query: 206 I 206 + Sbjct: 191 V 191 >gi|262198758|ref|YP_003269967.1| ribosome biogenesis GTP-binding protein YsxC [Haliangium ochraceum DSM 14365] gi|262082105|gb|ACY18074.1| ribosome biogenesis GTP-binding protein YsxC [Haliangium ochraceum DSM 14365] Length = 198 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/138 (49%), Positives = 86/138 (62%), Gaps = 13/138 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA---- 85 PEIAF+GRSNVGKSSLIN LV+ LARTS PGRT+ +N+F +PA Sbjct: 24 PEIAFAGRSNVGKSSLINTLVDIAGLARTSRTPGRTRLVNWF---------QIVPAKGKP 74 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ P SW LI YLS+R+TLR + +LID R G ++ + D+ +L Sbjct: 75 MLFVDLPGYGYAKVPTAMRASWRPLIEDYLSDRATLRALVVLIDARRGAQEEEIDLLDWL 134 Query: 146 DKKAVSYQIVLTKIDKLS 163 V V+TK DKLS Sbjct: 135 RSAEVPAITVVTKADKLS 152 >gi|294794044|ref|ZP_06759181.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. 3_1_44] gi|294455614|gb|EFG23986.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. 3_1_44] Length = 232 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 81/187 (43%), Positives = 105/187 (56%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFSNLKN 81 P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+F +D S + Sbjct: 43 PEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINYFDIESKEDISETEE 102 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQ 139 LVD+PGYG+A+ K N + W I Y+ SER L C LLID RH ID+ Sbjct: 103 CRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLC--LLIDGRHPEMAIDK 160 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 F +L + V QIV+TK DKL+ L K L YPTA P ++ SS+K G Sbjct: 161 VAFDWLVEAGVPLQIVVTKADKLTAKEKSANLSIIKEL---YPTATPPIL-YSSLKHTGR 216 Query: 200 EVLRKAI 206 E+L++ I Sbjct: 217 ELLQQRI 223 >gi|149278824|ref|ZP_01884959.1| GTPase EngB [Pedobacter sp. BAL39] gi|149230443|gb|EDM35827.1| GTPase EngB [Pedobacter sp. BAL39] Length = 209 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 107/193 (55%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ LP A PE AF GRSNVGKSSLIN+LVN+ LA+TS PG+TQ +N F+ Sbjct: 8 FICSNTKVSALPVANMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ K + + W I Y+++R +L+CV++LID R Sbjct: 68 NE---------KWYIVDLPGYGYAKVSKNSREKWEKFIRNYITKRESLQCVFVLIDSRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + ++ + + + ++ TK DK S + + K + + P TS+ Sbjct: 119 PQKIDLEFCCWMGEIQIPFALIFTKADKQSKVKTDQNVAAFKKALGGWFEEIPPYFVTSA 178 Query: 194 VKRKGIEVLRKAI 206 K G + + K I Sbjct: 179 EKALGRDEVLKFI 191 >gi|70949402|ref|XP_744115.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56523930|emb|CAH79943.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 929 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 104/187 (55%), Gaps = 9/187 (4%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ ++F+ K Sbjct: 104 VNELPLPKYPEIAFIGRSNSGKSTLINELCGRSNKAKVSKMPGCTKQIHFY--------K 155 Query: 81 NNLPAM-ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 P + LVD+PGYG+A + ++ W + YL R+ L+ V++LIDCR G+K D+ Sbjct: 156 IGKPCLLCLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRANLKKVFVLIDCRIGLKTSDK 215 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 ++F F D+ + YQIVL+K D L+ ++ I ++ +I SS+KR+ + Sbjct: 216 ELFHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIMNEEIVHFKNLEKNIISLSSLKRQNL 275 Query: 200 EVLRKAI 206 LR I Sbjct: 276 NELRNEI 282 >gi|239907036|ref|YP_002953777.1| probable GTP-binding protein EngB [Desulfovibrio magneticus RS-1] gi|239796902|dbj|BAH75891.1| probable GTP-binding protein EngB [Desulfovibrio magneticus RS-1] Length = 208 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/139 (44%), Positives = 86/139 (61%), Gaps = 8/139 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP P+IA +GRSNVGKS+LIN L RK+LA+TS PG+T+ LNF++ + Sbjct: 25 LPTLDAPQIALAGRSNVGKSTLINCLAGRKSLAKTSATPGKTRSLNFYMAET-------- 76 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYAR K+ D W LI YL+ TLR V LIDCR +++D ++ S Sbjct: 77 QGYCLVDLPGYGYARCSKEERDKWAKLIEAYLATTKTLRAVTALIDCRLPPQRLDMELVS 136 Query: 144 FLDKKAVSYQIVLTKIDKL 162 +L + + + LTK +K+ Sbjct: 137 WLRSRRIPVLVALTKAEKV 155 >gi|222053643|ref|YP_002536005.1| small GTP-binding protein domain protein [Geobacter sp. FRC-32] gi|254783197|sp|B9LZU0|ENGB_GEOSF RecName: Full=Probable GTP-binding protein EngB gi|221562932|gb|ACM18904.1| small GTP-binding protein domain protein [Geobacter sp. FRC-32] Length = 207 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/198 (36%), Positives = 113/198 (57%), Gaps = 14/198 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F++ P PEIAF+GRSNVGKSSLIN+LVNRK+L RTS+ PGRTQ +NFF V Sbjct: 8 FIKSATRAAHYPPGDLPEIAFAGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFDV 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 F+ LVD+PGYG+A+ P WG ++ YL++R+ LR V L++D R Sbjct: 68 NGQFT----------LVDLPGYGFAKVPLAVKKQWGPMMENYLAKRANLRGVILILDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 D + +L ++ +V+TK DK+S E ++++ + + E+ S Sbjct: 118 TPVAEDIQMLHWLQAYSIKPILVITKCDKVS---KNERGKQSRIIAQTLGVETEELNFFS 174 Query: 193 SVKRKGIEVLRKAILETI 210 ++ R+G +++ + I E + Sbjct: 175 ALNREGKDLIWRRIEEVL 192 >gi|170695712|ref|ZP_02886854.1| GTP-binding protein HSR1-related [Burkholderia graminis C4D1M] gi|170139317|gb|EDT07503.1| GTP-binding protein HSR1-related [Burkholderia graminis C4D1M] Length = 217 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 99/191 (51%), Gaps = 9/191 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQH+N+ Sbjct: 10 FFTTVNHLRDLPATAQPEIAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINY--- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS + + P LVD+PGYGYA P W L+ YL RS LR + L++D R Sbjct: 67 --FSVGREDEPVAHLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMILMMDSRRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 + +D+ + + +LTK DKL+ + L T+ Y A + T Sbjct: 125 LTDLDRRMIEWFAPTGKPIHALLTKCDKLTRQESVNALRTTQKGFAEYRAAGYQGELTAQ 184 Query: 192 --SSVKRKGIE 200 S++KR GI+ Sbjct: 185 LFSALKRVGID 195 >gi|312131612|ref|YP_003998952.1| ribosome biogenesis gtp-binding protein ysxc [Leadbetterella byssophila DSM 17132] gi|311908158|gb|ADQ18599.1| ribosome biogenesis GTP-binding protein YsxC [Leadbetterella byssophila DSM 17132] Length = 200 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/191 (38%), Positives = 104/191 (54%), Gaps = 10/191 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F + +I P+ PEIAF GRSNVGKSSLIN+L KNLA+TS+ PG+TQ +N ++ Sbjct: 8 VFSKSSAKIDQCPQDNLPEIAFIGRSNVGKSSLINMLTGVKNLAKTSSTPGKTQLINHYL 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + A LVD+PGYGYA+ P W + YL +R TL V++L+D R Sbjct: 68 VDN---------AWYLVDLPGYGYAKVPMSEKAKWEKMTWDYLLDRKTLLYVFVLVDIRI 118 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++ D D L + ++ +IV TK DK+ Q + ++ PE TS Sbjct: 119 KPQKSDLDFIRKLGENGIAIKIVFTKEDKVKTMEGQRNIMAFLEALKEDWDILPEYFVTS 178 Query: 193 SVKRKG-IEVL 202 S KR G +E+L Sbjct: 179 SEKRSGKVEML 189 >gi|313113614|ref|ZP_07799202.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium cf. prausnitzii KLE1255] gi|310624129|gb|EFQ07496.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium cf. prausnitzii KLE1255] Length = 199 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 104/200 (52%), Gaps = 14/200 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + K+ +I G+ LP++ PE++FSGRSNVGKSSLIN L +RKNLAR S+ PG+T Sbjct: 3 YNKADFIASYGIS--SQLPESDRPELSFSGRSNVGKSSLINKLCSRKNLARVSSTPGKTA 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ D VD+PGYGYA+ + + W LI Y + Sbjct: 61 TINFYSVDD----------CYFVDLPGYGYAKVSNADRERWDDLINSYFEAPRHHTLLVQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+DCRH D+ + +L + Y + LTK DKL + +TLE + L R P Sbjct: 111 LLDCRHAPSADDEQMLRYLHYHQIPYVVALTKADKLKKSQLAKTLEDFENLCR--PYGCQ 168 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 +V+ TS GI L+ + Sbjct: 169 KVVLTSGENGYGIPELQAVL 188 >gi|218962058|ref|YP_001741833.1| putative GTP-binding protein engB [Candidatus Cloacamonas acidaminovorans] gi|167730715|emb|CAO81627.1| putative GTP-binding protein engB [Candidatus Cloacamonas acidaminovorans] Length = 203 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 3/190 (1%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++ E P + PE AF+GRSNVGKS+LIN+L N K LA+TS+ PG+T+ LNFF+ Sbjct: 8 FFVKSAIEPSDYPASAYPEFAFAGRSNVGKSTLINLLTNHKGLAKTSSTPGKTRLLNFFL 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + ++ + D+PGYGYA + + W +I +Y +R LR + +++D RH Sbjct: 68 IRYKIDDNDSSGFLQFTDLPGYGYAEVSQAEQEKWRRMINKYFEQRKQLRSLIVIVDIRH 127 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 D + L + + Y IV TK DK+ T +T+ K L + + P S Sbjct: 128 PADSKDIMLLEMLRLRGIDYCIVATKADKIPKTKVAKTV---KDLAKGLGLKEEPIFPVS 184 Query: 193 SVKRKGIEVL 202 ++ G+E L Sbjct: 185 ALNNTGLEPL 194 >gi|293391510|ref|ZP_06635844.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952044|gb|EFE02163.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 204 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECLAGIVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 124 LKDLDQQMIKWAVASQLPVLLLLTKADKLSQSERSKQMKIVREAILPF-RGEIQVEAFSA 182 Query: 194 VKRKGIEVL 202 +KR GI+ L Sbjct: 183 LKRTGIDRL 191 >gi|269213778|ref|ZP_05982836.2| ribosome biogenesis GTP-binding protein YsxC [Neisseria cinerea ATCC 14685] gi|269145348|gb|EEZ71766.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria cinerea ATCC 14685] Length = 211 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 11 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N LVD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 68 ----ELQN---GNFLVDLPGYGYAQVPEAIRTHWVKLLGDYLQQRKQLIGLILIMDARHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y + V S Sbjct: 121 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSERQNISVQLFS 180 Query: 193 SVKRKGIEVLRKAI 206 S+K++G+E + + + Sbjct: 181 SLKKQGLEEVNQTV 194 >gi|189423527|ref|YP_001950704.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter lovleyi SZ] gi|238692100|sp|B3E2D1|ENGB_GEOLS RecName: Full=Probable GTP-binding protein EngB gi|189419786|gb|ACD94184.1| small GTP-binding protein [Geobacter lovleyi SZ] Length = 200 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 111/202 (54%), Gaps = 17/202 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-- 71 F++ + P PEIAF+GRSNVGKSSLIN++V RK L RTS+ PGRTQ +NFF Sbjct: 8 FIKSAVKPADYPPVDLPEIAFAGRSNVGKSSLINVIVERKALVRTSSTPGRTQLINFFQV 67 Query: 72 --VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 VP FS + LVD+PGYGYA+ P WG ++ RYLS R +LR V L++D Sbjct: 68 TGVP--FS--------LNLVDLPGYGYAKVPLDVKRQWGPMMERYLSGRESLRGVVLILD 117 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R + D + ++L IVLTK DK+ T E +T + ++I Sbjct: 118 IRRIPSEEDLQMLNWLRSYKRRPIIVLTKCDKV---TKNERARQTAAIAARLEMDKSQLI 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 S++ + G + + +AI + + Sbjct: 175 HFSALSKDGRDTVWQAIQDAVE 196 >gi|261418335|ref|YP_003252017.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y412MC61] gi|297529187|ref|YP_003670462.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. C56-T3] gi|319767706|ref|YP_004133207.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y412MC52] gi|261374792|gb|ACX77535.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y412MC61] gi|297252439|gb|ADI25885.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. C56-T3] gi|317112572|gb|ADU95064.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y412MC52] Length = 195 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE+A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PDGGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYLIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+AR K+ WG ++ Y + R L+ LL+D RH + D ++ F Sbjct: 70 SFYFVDVPGYGFARVSKQERQKWGNMMETYFTTREVLKAAVLLVDLRHPPTKDDVMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + ++ TK DK+ Sbjct: 130 LKHYEIPVIVIATKADKV 147 >gi|56421184|ref|YP_148502.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus kaustophilus HTA426] gi|81819655|sp|Q5KWK2|ENGB_GEOKA RecName: Full=Probable GTP-binding protein EngB gi|56381026|dbj|BAD76934.1| GTP-binding protein [Geobacillus kaustophilus HTA426] Length = 195 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE+A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PDGGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYLIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+AR K+ WG ++ Y + R L+ LL+D RH + D ++ F Sbjct: 70 SFYFVDVPGYGFARVSKQERQKWGNMMETYFTTREALKAAVLLVDLRHPPTKDDVMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + ++ TK DK+ Sbjct: 130 LKHYEIPVIVIATKADKV 147 >gi|255530888|ref|YP_003091260.1| GTP-binding protein HSR1-related [Pedobacter heparinus DSM 2366] gi|255343872|gb|ACU03198.1| GTP-binding protein HSR1-related [Pedobacter heparinus DSM 2366] Length = 201 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 111/198 (56%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ LP A PE AF GRSNVGKSSLIN+LVN+ LA+TS PG+TQ +N F+ Sbjct: 8 FICSNTKVSALPVANMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ K + ++W I Y+++R +L+CV++LID R Sbjct: 68 NE---------KWYIVDLPGYGYAKVSKTSRENWEKFIRNYITKRESLQCVFVLIDSRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + ++ + + + ++ TK DK S + + K + + P TS+ Sbjct: 119 PQKIDLEFCCWMGEIQIPFALIFTKADKQSTVKTDKNVALFKKALGGWFEEIPPYFVTSA 178 Query: 194 VKRKGIEVLRKAILETIN 211 K G E + + I E +N Sbjct: 179 EKGTGKEKVLEFI-EQVN 195 >gi|253995667|ref|YP_003047731.1| ribosome biogenesis GTP-binding protein YsxC [Methylotenera mobilis JLW8] gi|253982346|gb|ACT47204.1| GTP-binding protein HSR1-related [Methylotenera mobilis JLW8] Length = 211 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/187 (40%), Positives = 104/187 (55%), Gaps = 13/187 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP A E+AF+GRSN GKSS +N L N LA S PGRTQ +NFF L N+ Sbjct: 19 LPPASGVEVAFAGRSNAGKSSALNTLANHNRLAFVSKQPGRTQLINFFT------LGND- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ P+ W ++ RYLSERS+L + L++D RH + +D+ + Sbjct: 72 --RHLVDLPGYGYAKVPEAMRAHWQNVLARYLSERSSLGGLVLVMDSRHPLTPLDRQMLD 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIR---NYPTAHPEVIPTSSVKRKGI 199 + ++LTK DKLS A TL + K LI N+ + + SS+K++G+ Sbjct: 130 WFCPSGKPVHVLLTKSDKLSRGEASLTLNRVRKELIETWGNHYNSECTIQLFSSLKKQGV 189 Query: 200 EVLRKAI 206 E K I Sbjct: 190 EEAEKVI 196 >gi|221195789|ref|ZP_03568842.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium rimae ATCC 49626] gi|221184263|gb|EEE16657.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium rimae ATCC 49626] Length = 194 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 101/186 (54%), Gaps = 13/186 (6%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 I LPK PE++F GRSNVGKSSL+N L+ RK LAR S+ PG+T ++NFF Sbjct: 17 IAQLPKPTTPEVSFVGRSNVGKSSLLNRLLGRKQLARVSSVPGKTANINFF--------- 67 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 ++ + VD+PGYGYA+ W LI Y + + V L+D RH +++D Sbjct: 68 -DVDGVKFVDLPGYGYAKVSHIEKQRWADLIGGYFEQERSFNLVISLVDIRHEAQKLDLQ 126 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + FL + + + + LTK DK+ T + + L ++ A ++I TSS GI+ Sbjct: 127 MVDFLTEAELPFVVALTKADKI---TRNKQNQAAAALRSSFGLAQEQIIITSSETGLGID 183 Query: 201 VLRKAI 206 LR+ I Sbjct: 184 ELRRRI 189 >gi|282879591|ref|ZP_06288322.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella timonensis CRIS 5C-B1] gi|281306539|gb|EFA98568.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella timonensis CRIS 5C-B1] Length = 199 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 13/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P +G P E AF GRSNVGKSSLIN+L N + LA+TS+ PG+T +N F Sbjct: 8 FVLSSPNLGKCPTDQRIEYAFIGRSNVGKSSLINMLCNHQGLAKTSSTPGKTLLINHF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L NN LVD+PGYGYA+ KK + LI YL R L V++LID RH Sbjct: 66 -----LINN--DWYLVDLPGYGYAKRSKKVQEEIQKLITTYLLHREQLVNVFVLIDVRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + + I+ TK DKL A+ ++K +++ P TSS Sbjct: 119 QQKIDREFIDWLGLNEIPFTIIFTKADKLGTVKAKMNVDKWMSQLKDVWEELPRYFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 K+ G R+ +L+ I+ Sbjct: 179 EKKTG----RQELLDYID 192 >gi|253987784|ref|YP_003039140.1| ribosome biogenesis GTP-binding protein YsxC [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638662|emb|CAR67281.1| probable gtp-binding protein engb [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779234|emb|CAQ82394.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 246 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 51 FITSAPDIRHLPQDVGIEVAFAGRSNAGKSSALNALTNQKNLARTSKTPGRTQLINLFEV 110 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 111 EE---------GIRLVDLPGYGYAEVPEEIKRKWQKALGEYLQKRECLLGLVVLMDIRHP 161 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + V ++LTK DKL+ + + L K + + N +V S+ Sbjct: 162 LKDLDQQMIQWAVTMNVPIMVLLTKADKLTSSARKSQLIKIRGELANL-NGDIQVEYFSA 220 Query: 194 VKRKGIEVLR 203 +K+ GI+ L+ Sbjct: 221 LKKIGIDKLQ 230 >gi|55820661|ref|YP_139103.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus thermophilus LMG 18311] gi|55822552|ref|YP_140993.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus thermophilus CNRZ1066] gi|81820325|sp|Q5M0S3|ENGB_STRT1 RecName: Full=Probable GTP-binding protein EngB gi|81820489|sp|Q5M5A9|ENGB_STRT2 RecName: Full=Probable GTP-binding protein EngB gi|55736646|gb|AAV60288.1| GTP-binding protein [Streptococcus thermophilus LMG 18311] gi|55738537|gb|AAV62178.1| GTP-binding protein [Streptococcus thermophilus CNRZ1066] Length = 199 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 15/185 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+ RKNLARTS PG+TQ LNF+ D Sbjct: 25 PQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYNIDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK WG +I YL R LR V L+D RH Q D ++ F Sbjct: 76 KLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K K N+ + I SSV R G + Sbjct: 136 LKYYEIPVIVVATKADKIPRGKWNKHESIIKKKL---NF-DKNDHFIVFSSVTRDGYDEA 191 Query: 203 RKAIL 207 IL Sbjct: 192 WDTIL 196 >gi|50086223|ref|YP_047733.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter sp. ADP1] gi|49532199|emb|CAG69911.1| putative GTPase, involved in coordination of cell cycle (EngB) [Acinetobacter sp. ADP1] Length = 294 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 107/199 (53%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 56 FLMSAPKLSLCVEDTGYEIAFAGRSNAGKSSAINSLTNQKQLARASKKPGRTQMINFF-- 113 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 114 ----SLGN--PDQRLVDLPGYGYAAVPEDMKRIWQKELENYLIHRQSLQGLVLLMDIRHP 167 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L K ++ + + SS Sbjct: 168 LQHFDTMMLEWAHSRKLFVHILLTKADKLNRGPANQVLLDVKQTLKKMKLSFS-IQLFSS 226 Query: 194 VKRKGIEVLRKAILETINY 212 + ++G+E L + +NY Sbjct: 227 LNKQGLEELASVMAGRLNY 245 >gi|156936144|ref|YP_001440060.1| ribosome biogenesis GTP-binding protein YsxC [Cronobacter sakazakii ATCC BAA-894] gi|156534398|gb|ABU79224.1| hypothetical protein ESA_04042 [Cronobacter sakazakii ATCC BAA-894] Length = 222 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 22 FVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 81 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 82 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHP 132 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 133 LKDLDQQMIEWAVDSGIPVLVLLTKADKLASGARKAQLNMVREAVIAF-NGDVQVEAFSS 191 Query: 194 VKRKGIEVLR 203 +K+ G++ LR Sbjct: 192 LKKTGVDKLR 201 >gi|322517185|ref|ZP_08070068.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus vestibularis ATCC 49124] gi|322124244|gb|EFX95760.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus vestibularis ATCC 49124] Length = 168 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/138 (47%), Positives = 80/138 (57%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+ RKNLARTS PG+TQ LNF+ D Sbjct: 25 PQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYNIDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK WG +I YL R LR V L+D RH Q D ++ F Sbjct: 76 KLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TK DK+ Sbjct: 136 LKYYEIPVIVVATKADKI 153 >gi|319778689|ref|YP_004129602.1| GTP-binding protein EngB [Taylorella equigenitalis MCE9] gi|317108713|gb|ADU91459.1| GTP-binding protein EngB [Taylorella equigenitalis MCE9] Length = 203 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 109/198 (55%), Gaps = 12/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F ++ LP+ PE+ F GRSNVGKSS IN+L N++ LA S PGRT+ +N F + Sbjct: 9 FFVSASQLNQLPEPSVPEVCFVGRSNVGKSSAINVLANQRRLAYASKTPGRTRLINLFGI 68 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 P S + A LVD+PGYGYA + + W ++ YL RS+L V LLID R Sbjct: 69 P---SKDDPDQAAAFLVDLPGYGYASVAQNTKEEWAEVLGSYLRTRSSLAAVVLLIDIRR 125 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKL---SPTTAQETLEKTKYLIRNYPTAHPEVI 189 G+ +D+ + ++ + ++LTK DKL TA + K+ I++ +VI Sbjct: 126 GLTTLDKLLIDWIAPYEIPLIVLLTKADKLPYGQRKTATFGINKSIKQIKDL-----KVI 180 Query: 190 PTSSVKRKGIEVLRKAIL 207 P SS +R GIE KAIL Sbjct: 181 PFSSTERIGIEETEKAIL 198 >gi|258544865|ref|ZP_05705099.1| ribosome biogenesis GTP-binding protein YsxC [Cardiobacterium hominis ATCC 15826] gi|258519888|gb|EEV88747.1| ribosome biogenesis GTP-binding protein YsxC [Cardiobacterium hominis ATCC 15826] Length = 204 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 100/174 (57%), Gaps = 13/174 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA--L 88 EIAF+GRSN GKSS +N L N+K LAR S PGRTQ +N+F LP L Sbjct: 27 EIAFAGRSNAGKSSALNTLTNQKALARVSRTPGRTQLINYFA----------LPEAGCYL 76 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYA P++ W L+ RYL R+ LR + LL+D RH +K +D + ++ Sbjct: 77 VDLPGYGYAEVPEQMRAHWQALLGRYLLTRAVLRGIVLLMDIRHPMKDLDIRMLECCAER 136 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + I+LTK DKLS A + L+ + + N+ A V SS+K++G+ L Sbjct: 137 QLPAHILLTKADKLSRGAAGKQLQAVRGELANW-HAPFSVQMFSSLKKEGLPAL 189 >gi|228478240|ref|ZP_04062848.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus salivarius SK126] gi|312863700|ref|ZP_07723938.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus vestibularis F0396] gi|228249919|gb|EEK09189.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus salivarius SK126] gi|311101236|gb|EFQ59441.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus vestibularis F0396] Length = 199 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 15/185 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+ RKNLARTS PG+TQ LNF+ D Sbjct: 25 PQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYNIDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK WG +I YL R LR V L+D RH Q D ++ F Sbjct: 76 KLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K K N+ + I SSV R G + Sbjct: 136 LKYYEIPVIVVATKADKIPRGKWNKHESIIKKKL---NF-DKNDHFIVFSSVTRDGYDEA 191 Query: 203 RKAIL 207 IL Sbjct: 192 WDTIL 196 >gi|322372511|ref|ZP_08047047.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. C150] gi|321277553|gb|EFX54622.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. C150] Length = 199 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/138 (47%), Positives = 80/138 (57%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+ RKNLARTS PG+TQ LNF+ D Sbjct: 25 PQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYNIDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK WG +I YL R LR V L+D RH Q D ++ F Sbjct: 76 KLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TK DK+ Sbjct: 136 LKYYEIPVIVVATKADKI 153 >gi|163752987|ref|ZP_02160111.1| GTP-binding protein [Kordia algicida OT-1] gi|161326719|gb|EDP98044.1| GTP-binding protein [Kordia algicida OT-1] Length = 202 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P+ PE AF GRSNVGKSSLIN+L RK+LA+TS PG+TQ +N F Sbjct: 8 FVMSNSDVAKCPRNKIPEYAFIGRSNVGKSSLINMLTQRKSLAKTSGRPGKTQLINHFKI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYAR K + I Y +R+ L C ++L+D RH Sbjct: 68 ND---------EWFLVDLPGYGYARVSKSAKKVFQKFITEYFRKRTQLVCGFVLVDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY-LIRNYPTAHPEVIPTS 192 +++D + +L + + + IV TK DKL P+ + + + L+ + P+ TS Sbjct: 119 PQKVDLEFMQWLGENQIPFCIVFTKADKLRPSQIDKHVNAYREKLLEDVWEEMPQHFVTS 178 Query: 193 SVKRKGIEVL 202 S K G E L Sbjct: 179 SSKAIGREEL 188 >gi|331003806|ref|ZP_08327298.1| GTP-binding protein engB [Lachnospiraceae oral taxon 107 str. F0167] gi|330411998|gb|EGG91395.1| GTP-binding protein engB [Lachnospiraceae oral taxon 107 str. F0167] Length = 197 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 61/139 (43%), Positives = 85/139 (61%), Gaps = 9/139 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEI F+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +N++ D Sbjct: 18 FPDNKEPEIVFAGKSNVGKSSLINALMNRKSLARTSGKPGKTQTINYYKVND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYGYA A + WG +I RYL ++C++LLID RH + D+ ++ Sbjct: 70 -DLYFVDLPGYGYANANLATKEKWGKMIERYLHTSKQIKCIFLLIDIRHEPGKNDKQMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKL 162 ++ S I+ TK+DKL Sbjct: 129 WIVYNGYSPVIIATKLDKL 147 >gi|329770551|ref|ZP_08261929.1| ribosome biogenesis GTP-binding protein YsxC [Gemella sanguinis M325] gi|328836300|gb|EGF85969.1| ribosome biogenesis GTP-binding protein YsxC [Gemella sanguinis M325] Length = 198 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 72/176 (40%), Positives = 96/176 (54%), Gaps = 11/176 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A GRSNVGKSS IN ++ RKN AR S+ PG+T+ LNFF D Sbjct: 22 PEHKKPEVAMCGRSNVGKSSFINTILERKNYARVSSKPGKTRTLNFFDIDD--------- 72 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K + +IV Y + L V LID RH Q D ++ F Sbjct: 73 KLVLVDVPGYGYAKLSKSEKEKLYDMIVEYFTNSQNLGFVLHLIDSRHKPSQDDIEMNEF 132 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L+ + + +VLTKIDK+S L K K + T + +IP SSV + G E Sbjct: 133 LNYYEIPFVVVLTKIDKISKNELSRNLSKIKKELE--LTNNMAIIPFSSVTKLGKE 186 >gi|146329655|ref|YP_001209308.1| GTPase [Dichelobacter nodosus VCS1703A] gi|146233125|gb|ABQ14103.1| GTPase [Dichelobacter nodosus VCS1703A] Length = 199 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 11/181 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LPK E+AF+GRSN GKSS +N L N+ LAR S PGRTQ +N+F D Sbjct: 20 LPKDAVVEVAFAGRSNAGKSSALNALTNQATLARVSKTPGRTQLINYFALPDAGKY---- 75 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ P W L+ YL R L+ V L++D RH +K +DQ + Sbjct: 76 ----LVDLPGYGYAQVPDAVRQHWEHLLGDYLLTRQALKGVVLIMDIRHPLKPLDQQLLD 131 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQ-ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +A+ ++LTK DKLS + + + + +L + ++ + SS+K++G++ L Sbjct: 132 CCQARALPVHVLLTKADKLSKSAQKMQQNQVANFLAQRMESSSVQTF--SSLKKEGLDAL 189 Query: 203 R 203 R Sbjct: 190 R 190 >gi|325286915|ref|YP_004262705.1| GTP-binding protein engB [Cellulophaga lytica DSM 7489] gi|324322369|gb|ADY29834.1| GTP-binding protein engB [Cellulophaga lytica DSM 7489] Length = 206 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 14/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L+ RK+LA+TS PG+TQ +N F + Sbjct: 19 PSEPLPEYAFIGRSNVGKSSLINMLMQRKSLAKTSGRPGKTQLINHFKVNE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYAR KK ++ I Y ER L C ++L+D RH +++D + + Sbjct: 70 NWFLVDLPGYGYARVSKKEKKTFQKYITDYFKERIQLVCAFVLVDIRHEPQKVDLEFLEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + + + ++ TK DKL P Q+ + L+ P+ TSS G R Sbjct: 130 MGENQIPFALIFTKADKLKPQVIQKQADNYINALLEGIWEDAPQYFITSSANNLG----R 185 Query: 204 KAILETIN 211 + +LE I+ Sbjct: 186 EDVLEFID 193 >gi|110598119|ref|ZP_01386397.1| GTP-binding [Chlorobium ferrooxidans DSM 13031] gi|110340251|gb|EAT58748.1| GTP-binding [Chlorobium ferrooxidans DSM 13031] Length = 202 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 15/182 (8%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDF 76 V + LP+ PEI F+GRSNVGKS+L+N L K LA+TS+ PG+T+ +N+F + ++F Sbjct: 22 VSALSGLPEESTPEIVFAGRSNVGKSTLLNSLTGLKALAKTSSTPGKTRLINYFLINQEF 81 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 VD+PGYGYA ++ +WG L+ Y+ ER ++ V LL D RH + Sbjct: 82 ----------YFVDLPGYGYAAVGQEQKAAWGHLLSSYIEERQSISLVVLLFDSRHPAME 131 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + +FL+ Y IVLTK DKL+ Q+ + KT+ ++ + ++ SS Sbjct: 132 SDRAMINFLEFHERPYGIVLTKFDKLT----QKEMAKTRRIMESCAAKAKFIVNYSSFSG 187 Query: 197 KG 198 KG Sbjct: 188 KG 189 >gi|85060212|ref|YP_455914.1| GTPase EngB [Sodalis glossinidius str. 'morsitans'] gi|119369261|sp|Q2NQR6|ENGB_SODGM RecName: Full=Probable GTP-binding protein EngB gi|84780732|dbj|BAE75509.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 211 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+K+LARTS PGRT+ +N F Sbjct: 12 FVTSAPDIRHLPVDSGIEIAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTRLINLFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P++ W + YL R +L+ + +L+D RH Sbjct: 72 ES---------GIRLVDLPGYGYAEVPEELKRKWQRALGEYLQMRDSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + +E L + + + +V SS Sbjct: 123 MKDLDQQMVQWAVDVNIPVLVLLTKADKLASGSRKEQLNQVREAALAF-MGDVQVETFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 182 LKKQGVDKLRQKL 194 >gi|295094046|emb|CBK83137.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Coprococcus sp. ART55/1] Length = 198 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 77/189 (40%), Positives = 109/189 (57%), Gaps = 15/189 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +NF+ N+ NL Sbjct: 18 LPDNDLPEIAFAGKSNVGKSSLINGLLNRKSLARTSAQPGKTQTINFY------NVNKNL 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ + WG +I RYL L+ V+LLID RH + D ++ Sbjct: 72 ---YFVDLPGYGYAKVSVEIRAKWGKMIERYLHGSPQLKKVFLLIDIRHVPSENDCMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEV 201 ++ I+ TK+DK+ + Q+ L+ LIR P +IP S+ ++G + Sbjct: 129 WIVDNGYEPVIICTKLDKIKRSQVQKNLK----LIREKLDLVPGTTMIPFSAQTKQGRDE 184 Query: 202 LRKAILETI 210 + I ET+ Sbjct: 185 IWNLIEETL 193 >gi|156082736|ref|XP_001608852.1| GTP-binding protein engB [Babesia bovis T2Bo] gi|154796102|gb|EDO05284.1| GTP-binding protein engB, putative [Babesia bovis] Length = 290 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 10/189 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP A PE+AF GR+N GKS LIN + R + PG T+ L+F+ K Sbjct: 51 LPPAALPEVAFYGRTNAGKSCLINAICGRYGVCPVHELPGTTRKLHFY--------KVGT 102 Query: 84 PAMAL-VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 P+ + VDMPGYGY+ A W + YL R+TL+ + +L+DCR G+KQ D +V Sbjct: 103 PSTVIFVDMPGYGYSTAKDDLSMQWNEFSLSYLKHRNTLKLLVVLVDCRIGLKQSDLEVI 162 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +F DK V +Q+VL K D + P + L K + + + +++ + I SS K + +E + Sbjct: 163 NFCDKYKVKWQVVLAKADMVKPVLVAKMLHKVRLELAIFRSSNGKPIAISSTKNQNLEEI 222 Query: 203 RKAILETIN 211 R ILE N Sbjct: 223 R-GILEHFN 230 >gi|323127109|gb|ADX24406.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 199 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 77/186 (41%), Positives = 99/186 (53%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ PG+TQ LNFF N+ + L Sbjct: 25 PQDDLPEIALAGRSNVGKSSFINTMLGRKNLARTSSKPGKTQLLNFF------NIDDKL- 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ R LR V L+D RH + D ++ F Sbjct: 78 --RFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHEPSKEDVQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ + K + T I SSV R GI+ Sbjct: 136 LKYYDIPVIIVATKADKIPRGKWNKHESMVKKTLGFDKT--DRFIIFSSVDRVGIDEAWD 193 Query: 205 AILETI 210 ILE + Sbjct: 194 TILEHL 199 >gi|53803258|ref|YP_115009.1| GTP-binding protein [Methylococcus capsulatus str. Bath] gi|81681069|sp|Q604E1|ENGB_METCA RecName: Full=Probable GTP-binding protein EngB gi|53757019|gb|AAU91310.1| GTP-binding protein [Methylococcus capsulatus str. Bath] Length = 210 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 99/187 (52%), Gaps = 9/187 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +LR + E+ P E+AF+GRSN GKSS IN L N LAR S PGRT+ +NFF Sbjct: 10 YLRSILELKDAPPDQGCEVAFAGRSNAGKSSAINTLANVGGLARVSKTPGRTRMINFFSI 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ P + W + +YL R +LR V+LL+D RH Sbjct: 70 DD---------GRRLVDLPGYGYAKVPGEIHRRWEAALEQYLRYRQSLRGVFLLMDVRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++D+ + + ++++ + LTK DKLS A K + Y + V SS Sbjct: 121 FTEMDEVMIEWCAHRSIALHVALTKSDKLSRGAAMNARLMAKTRLAGYGSPDFSVQLFSS 180 Query: 194 VKRKGIE 200 +K+ G E Sbjct: 181 LKKSGTE 187 >gi|254228534|ref|ZP_04921959.1| GTPase of unknown function subfamily, putative [Vibrio sp. Ex25] gi|151938916|gb|EDN57749.1| GTPase of unknown function subfamily, putative [Vibrio sp. Ex25] Length = 223 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 127 MKDLDQQMIFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLR 203 +K G++ LR Sbjct: 186 LKGLGVDQLR 195 >gi|310829088|ref|YP_003961445.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium limosum KIST612] gi|308740822|gb|ADO38482.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium limosum KIST612] Length = 193 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/174 (39%), Positives = 96/174 (55%), Gaps = 11/174 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEI GRSNVGKSS IN L+ RK LARTS+ PG+TQ +NF+ D Sbjct: 19 PEDNLPEIVLLGRSNVGKSSFINTLIQRKGLARTSSQPGKTQTMNFYKIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A VDMPGYGYA+ KK + WG +I YL +R + V LL+D RH + D+ ++ + Sbjct: 70 AFYFVDMPGYGYAKVSKKEREKWGVMIEEYLQKRENMVLVLLLVDSRHEPTEDDRLMYDW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 L + I+ TK DK+S ++ ++ +R P +VI S+ + G Sbjct: 130 LTYYGLDPVIIATKADKISKVRQKKAVDNIFNTLR--PRKRSDVILFSAATKMG 181 >gi|260063723|ref|YP_003196803.1| putative GTP-binding cell division protein [Robiginitalea biformata HTCC2501] gi|88783168|gb|EAR14341.1| putative GTP-binding cell division protein [Robiginitalea biformata HTCC2501] Length = 208 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/180 (40%), Positives = 97/180 (53%), Gaps = 10/180 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 ++ P PE AF GRSNVGKSSLIN+L +RK+LA+ S PG+TQ +N F D Sbjct: 14 DVSRCPAEPLPEYAFIGRSNVGKSSLINMLTDRKHLAKISGRPGKTQLINHFRIND---- 69 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 LVD+PGYGYAR KK+ ++ LI RY ER L +LL+D RH + ID Sbjct: 70 -----NWFLVDLPGYGYARTSKKDKAAFQKLIHRYFRERRQLLSAFLLVDIRHEPQPIDL 124 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKG 198 + +L + + + ++ TK DKL P + +RN A P TSS+K G Sbjct: 125 EFMEWLTGEGIPFALIFTKADKLKPGAVSRQTDGYLQAMRNAGWEADPPFFVTSSLKGIG 184 >gi|260583671|ref|ZP_05851419.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella elegans ATCC 700633] gi|260158297|gb|EEW93365.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella elegans ATCC 700633] Length = 197 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 81/132 (61%), Gaps = 9/132 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIA SGRSNVGKSS IN L+ RK+LARTS+ PG+TQ LNF+ D VD Sbjct: 25 EIALSGRSNVGKSSFINRLIQRKSLARTSSKPGKTQTLNFYHINDL---------FYFVD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ KK + WG +I Y++ R L V +L+D RH D + FL+ + Sbjct: 76 VPGYGYAKVSKKEREKWGKMIEEYITTRENLELVLILVDFRHEPSTEDVQMREFLEYYEI 135 Query: 151 SYQIVLTKIDKL 162 Y+I++TK DK+ Sbjct: 136 PYRIIMTKCDKI 147 >gi|124809435|ref|XP_001348574.1| GTP binding protein, putative [Plasmodium falciparum 3D7] gi|23497470|gb|AAN37013.1| GTP binding protein, putative [Plasmodium falciparum 3D7] Length = 1000 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K + + ++ LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ + Sbjct: 93 KPRMVLYKTAIQVNELPLPKYPEIAFIGRSNCGKSTLINELCGRTNKAKVSKIPGCTKEI 152 Query: 69 NFFVPKDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +F+ K P M LVD+PGYGYA ++ W + YL R L+ V++L Sbjct: 153 HFY--------KIGKPCLMCLVDLPGYGYAECKEELRLQWNEFTLFYLKNRKNLKKVFVL 204 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 IDCR G+K D+++ F D+ + YQIVL+K D L+ ++ I + Sbjct: 205 IDCRVGLKTSDKELLHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIINQDILPFKNLEKP 264 Query: 188 VIPTSSVKRKGIEVLRKAI 206 +IP SS+K + + LR I Sbjct: 265 LIPLSSIKNQNLSELRNEI 283 >gi|269964580|ref|ZP_06178819.1| GTP-binding protein [Vibrio alginolyticus 40B] gi|269830707|gb|EEZ84927.1| GTP-binding protein [Vibrio alginolyticus 40B] Length = 223 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 127 MKDLDQQMIFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLR 203 +K G++ LR Sbjct: 186 LKGLGVDQLR 195 >gi|91224945|ref|ZP_01260204.1| GTP-binding protein [Vibrio alginolyticus 12G01] gi|91190191|gb|EAS76461.1| GTP-binding protein [Vibrio alginolyticus 12G01] Length = 223 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 127 MKDLDQQMIFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLR 203 +K G++ LR Sbjct: 186 LKGLGVDQLR 195 >gi|238794562|ref|ZP_04638170.1| GTP-binding protein engB [Yersinia intermedia ATCC 29909] gi|238726142|gb|EEQ17688.1| GTP-binding protein engB [Yersinia intermedia ATCC 29909] Length = 207 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VD---------GIRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G+E LR+ + Sbjct: 174 LKKIGVEKLREKL 186 >gi|262392690|ref|YP_003284544.1| GTP-binding protein EngB [Vibrio sp. Ex25] gi|262336284|gb|ACY50079.1| GTP-binding protein EngB [Vibrio sp. Ex25] Length = 219 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 72 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 123 MKDLDQQMIFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETF-GGDVSVDVFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR A L+T Sbjct: 182 LKGLGVDQLR-AKLDT 196 >gi|221059611|ref|XP_002260451.1| probable GTP-binding protein [Plasmodium knowlesi strain H] gi|193810524|emb|CAQ41718.1| probable GTP-binding protein, putative [Plasmodium knowlesi strain H] Length = 965 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 105/195 (53%), Gaps = 9/195 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 I + ++ LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ ++F+ Sbjct: 112 ILYKTAIQVSELPLPKYPEIAFIGRSNSGKSTLINELCGRTNKAKVSKLPGCTKEIHFY- 170 Query: 73 PKDFSNLKNNLPAM-ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 K P + LVD+PGYG+A + ++ W + YL R L+ V++LIDCR Sbjct: 171 -------KIAKPCLLCLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRKNLKKVFVLIDCR 223 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G+K D+++ F D+ + YQIV +K D L+ ++ I + +IP Sbjct: 224 VGLKTSDKELLHFFDRYNIKYQIVFSKCDLLNTKDLAVKIQIANEEIACFKNLEAPIIPL 283 Query: 192 SSVKRKGIEVLRKAI 206 SS+KR+ + LRK I Sbjct: 284 SSLKRQNLNELRKEI 298 >gi|15603376|ref|NP_246450.1| GTPase EngB [Pasteurella multocida subsp. multocida str. Pm70] gi|13431508|sp|P57947|ENGB_PASMU RecName: Full=Probable GTP-binding protein EngB gi|12721898|gb|AAK03595.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 205 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N F Sbjct: 13 FLTSAPDIRALPEDSGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L V +L+D RH Sbjct: 73 E---------PQCRLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRQCLAGVVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 124 LKDLDQQMIEWAVASELPVLLLLTKADKLSQSARSKQVKMVREAILPF-QGDVQVEAFSA 182 Query: 194 VKRKGIEVL 202 + + GI+ L Sbjct: 183 LNKTGIDRL 191 >gi|88801296|ref|ZP_01116824.1| GTP-binding protein [Polaribacter irgensii 23-P] gi|88781954|gb|EAR13131.1| GTP-binding protein [Polaribacter irgensii 23-P] Length = 203 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 76/189 (40%), Positives = 97/189 (51%), Gaps = 17/189 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L+ RK+LA+ S PG+TQ +N F + Sbjct: 19 PTERMPEYAFIGRSNVGKSSLINMLMERKDLAKISGKPGKTQLINHFKINE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA KK + I Y ER L C ++LID RH ++ID D F Sbjct: 70 EWFLVDLPGYGYASVSKKKRVIFQYFIENYFKEREQLVCTFVLIDSRHDPQKIDLDFMQF 129 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + + + I+ TK DKL S Q T K K L H E +PTS + + Sbjct: 130 LGENQIPFCIIFTKADKLGSSKLNKQITSYKKKLL------QHWETLPTSFLTSSNTSLG 183 Query: 203 RKAILETIN 211 R L I+ Sbjct: 184 RTEFLNFID 192 >gi|156100483|ref|XP_001615969.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148804843|gb|EDL46242.1| hypothetical protein, conserved [Plasmodium vivax] Length = 988 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 107/199 (53%), Gaps = 9/199 (4%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K I + ++ LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ + Sbjct: 113 KPRMILYKTAIQVSELPLPKYPEIAFIGRSNCGKSTLINELCGRTNKAKVSKLPGCTKEI 172 Query: 69 NFFVPKDFSNLKNNLPAM-ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +F+ K P + LVD+PGYG+A + ++ W + YL R L+ V++L Sbjct: 173 HFY--------KIAKPCLLCLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRKNLKKVFVL 224 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 IDCR G+K D+++ F D+ + YQIVL+K D L+ ++ I + Sbjct: 225 IDCRIGLKTSDKELLHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIANEEIACFKNLEAP 284 Query: 188 VIPTSSVKRKGIEVLRKAI 206 +IP SS+KR+ + LR+ I Sbjct: 285 IIPLSSLKRQNLNELRREI 303 >gi|294651641|ref|ZP_06728945.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter haemolyticus ATCC 19194] gi|292822490|gb|EFF81389.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter haemolyticus ATCC 19194] Length = 258 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 106/199 (53%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDTGYEIAFAGRSNAGKSSAINALTNKKQLARASKKPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPESMKIVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A +TL K ++ + SS Sbjct: 158 LQHFDLMMLEWAHSRHLFVHILLTKADKLNRGPANKTLLDVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + R G+E L + +NY Sbjct: 217 LNRIGLEELASVMAGRLNY 235 >gi|238755603|ref|ZP_04616940.1| GTP-binding protein engB [Yersinia ruckeri ATCC 29473] gi|238706203|gb|EEP98583.1| GTP-binding protein engB [Yersinia ruckeri ATCC 29473] Length = 216 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 73 TD---------GIRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 124 LKDLDQQMITWAVAVGTPVMLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVETFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 183 LKKIGVDKLREKL 195 >gi|188585731|ref|YP_001917276.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus JW/NM-WN-LF] gi|229813286|sp|B2A1E8|ENGB_NATTJ RecName: Full=Probable GTP-binding protein EngB gi|179350418|gb|ACB84688.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus JW/NM-WN-LF] Length = 193 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 69/175 (39%), Positives = 98/175 (56%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEI+F GRSNVGKSSLIN L+NRKNLA TS PG+T+ +NFF+ Sbjct: 18 FPSEMYPEISFIGRSNVGKSSLINTLINRKNLAYTSKQPGKTRTINFFLIN--------- 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++ VD+PGYG+A+ K W L+ YLS+R+TL+ L+ID RHG K D D+F Sbjct: 69 KSLYFVDLPGYGFAKVSKTMQKDWEQLVNAYLSQRNTLKLSILIIDGRHGPKDADIDMFD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +L +V TK+DK+ ++ + + + + E+I SS +G Sbjct: 129 YLLDFERPVLLVATKMDKVKANKRKQRITEMRSALE--LDQDDELITFSSATGEG 181 >gi|292558275|gb|ADE31276.1| GTP-binding protein domain containing protein [Streptococcus suis GZ1] Length = 206 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 103/207 (49%), Gaps = 16/207 (7%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 I T +A I L V + P PEIA +GRSNVGKSS IN L+ RKNLARTS PG+T Sbjct: 14 INTHNAEILLSAVSK-AQYPGYDIPEIALAGRSNVGKSSFINTLLGRKNLARTSGKPGKT 72 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNF+ D + VD+PGYGYA+ K WG +I YL+ R LR V Sbjct: 73 QQLNFYNIDD---------KIRFVDVPGYGYAKVSKTERAKWGKMIEEYLTTRENLRVVV 123 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPT 183 L+D RH D ++ FL + IV TK DK+ E++ K K Sbjct: 124 SLVDMRHEPSADDVQMYDFLKYYEIPVIIVATKADKIPRGKWNKHESMIKKKLDF----D 179 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETI 210 + + + SS R G + AIL I Sbjct: 180 KNDQFVIFSSETRHGYDQAWDAILSNI 206 >gi|28896883|ref|NP_796488.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus RIMD 2210633] gi|153838823|ref|ZP_01991490.1| GTP-binding protein [Vibrio parahaemolyticus AQ3810] gi|260365930|ref|ZP_05778424.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus K5030] gi|260877782|ref|ZP_05890137.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus AN-5034] gi|260895568|ref|ZP_05904064.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus Peru-466] gi|260902593|ref|ZP_05910988.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus AQ4037] gi|31340058|sp|Q87TG0|ENGB_VIBPA RecName: Full=Probable GTP-binding protein EngB gi|28805091|dbj|BAC58372.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747753|gb|EDM58649.1| GTP-binding protein [Vibrio parahaemolyticus AQ3810] gi|308088574|gb|EFO38269.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus Peru-466] gi|308089816|gb|EFO39511.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus AN-5034] gi|308109669|gb|EFO47209.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus AQ4037] gi|308113473|gb|EFO51013.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus K5030] gi|328471657|gb|EGF42534.1| GTP-binding protein YsxC [Vibrio parahaemolyticus 10329] Length = 219 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 72 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 123 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETF-GGDVSVDVFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR A L+T Sbjct: 182 LKGLGVDQLR-AKLDT 196 >gi|37678371|ref|NP_932980.1| GTPase EngB [Vibrio vulnificus YJ016] gi|37197110|dbj|BAC92951.1| predicted GTPase [Vibrio vulnificus YJ016] Length = 220 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 110/196 (56%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 TEGCH---------IVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + L K + L + +V SS Sbjct: 127 MKDLDQQMIFWAIESRIPVQVLLTKADKLKSGARKAELLKVRKLAETF-GGDVQVDVYSS 185 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR A L+T Sbjct: 186 LKGLGVDQLR-AKLDT 200 >gi|226953864|ref|ZP_03824328.1| GTPase, involved in coordination of cell cycle (EngB) [Acinetobacter sp. ATCC 27244] gi|226835347|gb|EEH67730.1| GTPase, involved in coordination of cell cycle (EngB) [Acinetobacter sp. ATCC 27244] Length = 258 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 106/199 (53%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDTGYEIAFAGRSNAGKSSAINALTNKKQLARASKKPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPESMKIVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A +TL K ++ + SS Sbjct: 158 LQHFDLMMLEWAHSRHLFVHILLTKADKLNRGPANKTLLDVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + R G+E L + +NY Sbjct: 217 LNRIGLEELASVMAGRLNY 235 >gi|223932114|ref|ZP_03624118.1| small GTP-binding protein domain protein [Streptococcus suis 89/1591] gi|302023733|ref|ZP_07248944.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus suis 05HAS68] gi|330832768|ref|YP_004401593.1| GTP-binding protein [Streptococcus suis ST3] gi|223899095|gb|EEF65452.1| small GTP-binding protein domain protein [Streptococcus suis 89/1591] gi|329306991|gb|AEB81407.1| GTP-binding protein [Streptococcus suis ST3] Length = 195 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 103/207 (49%), Gaps = 16/207 (7%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 I T +A I L V + P PEIA +GRSNVGKSS IN L+ RKNLARTS PG+T Sbjct: 3 INTHNAEILLSAVSK-AQYPGDDIPEIALAGRSNVGKSSFINTLLGRKNLARTSGKPGKT 61 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNF+ D + VD+PGYGYA+ K WG +I YL+ R LR V Sbjct: 62 QQLNFYNIDD---------KIRFVDVPGYGYAKVSKTERAKWGKMIEEYLTTRENLRVVV 112 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPT 183 L+D RH D ++ FL + IV TK DK+ E++ K K Sbjct: 113 SLVDMRHEPSADDVQMYDFLKYYEIPVIIVATKADKIPQGKWNKHESMIKKKLDF----D 168 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETI 210 + + + SS R G + AIL I Sbjct: 169 KNDQFVIFSSETRHGYDQAWDAILSNI 195 >gi|116627470|ref|YP_820089.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus thermophilus LMD-9] gi|122267932|sp|Q03LM9|ENGB_STRTD RecName: Full=Probable GTP-binding protein EngB gi|116100747|gb|ABJ65893.1| Predicted GTPase [Streptococcus thermophilus LMD-9] gi|312277988|gb|ADQ62645.1| GTPase EngB [Streptococcus thermophilus ND03] Length = 199 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 15/185 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+ RKNLARTS PG+TQ LNF+ D Sbjct: 25 PQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQLLNFYNIDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYAR KK WG +I YL R LR V L+D RH Q D ++ F Sbjct: 76 KLRFVDVPGYGYARVSKKARAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTQDDIQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E++ K K N+ + I SSV R G + Sbjct: 136 LKYYEIPVIVVATKADKIPRGKWNKHESIIKKKL---NF-DKNDHFIVFSSVTRDGYDEA 191 Query: 203 RKAIL 207 IL Sbjct: 192 WDTIL 196 >gi|119503604|ref|ZP_01625687.1| GTP-binding protein EngB [marine gamma proteobacterium HTCC2080] gi|119460666|gb|EAW41758.1| GTP-binding protein EngB [marine gamma proteobacterium HTCC2080] Length = 221 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 100/191 (52%), Gaps = 12/191 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ +G P E+AF+GRSN GKSS IN L + + LARTS PGRTQ +NFF Sbjct: 21 FMQSASSLGNAPSDTGSEVAFAGRSNAGKSSAINTLTSNRKLARTSRTPGRTQLINFFSL 80 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA+ P K W + YL R +LR + LL+D RH Sbjct: 81 SD---------SQRLVDLPGYGYAKVPLKMKQEWNRHMADYLQRRESLRGLILLMDIRHP 131 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTS 192 + D+ + + K + +LTK DKL A+ TL + + + A ++ S Sbjct: 132 LTDADEQMIGWASKAQMPIHALLTKADKLKRGPAKATLLSVQARLLEFGDLASAQLF--S 189 Query: 193 SVKRKGIEVLR 203 S+K G+ LR Sbjct: 190 SLKEDGLPALR 200 >gi|228471282|ref|ZP_04056088.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas uenonis 60-3] gi|228306924|gb|EEK16022.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas uenonis 60-3] Length = 203 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 107/190 (56%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P + P++ PE AF GRSNVGKSSLIN+L K LA TS PG+TQ +N F+ Sbjct: 8 FVQSSPSVKSCPQSTLPEYAFIGRSNVGKSSLINMLTGHKGLAMTSQKPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYAR + + + LI +Y+S+R L +++L+D RH Sbjct: 68 NQ---------SWHLVDLPGYGYARRSLEQREQFRKLITQYVSKREALVNLFVLVDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY-LIRNYPTAHPEVIPTS 192 ++ID + + + +K + + IV TK DK+ QE +E + L+ ++ P + ++ Sbjct: 119 PQRIDLEFINEMGEKGIPFSIVFTKADKIGKQVQQEAVEAYRSRLLEDWEELPPLFVTSA 178 Query: 193 SVKRKGIEVL 202 S E+L Sbjct: 179 STGMGRDELL 188 >gi|85860199|ref|YP_462401.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophus aciditrophicus SB] gi|119369274|sp|Q2LVW9|ENGB_SYNAS RecName: Full=Probable GTP-binding protein EngB gi|85723290|gb|ABC78233.1| GTP-binding protein [Syntrophus aciditrophicus SB] Length = 196 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 68/139 (48%), Positives = 81/139 (58%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE+AF GRSNVGKSSLIN L+ RK LARTSN PGRTQ +NFF N+ L Sbjct: 19 PPGSLPEVAFVGRSNVGKSSLINTLLRRKQLARTSNTPGRTQLINFF------NVNQEL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYG+AR P+ WG +I YL +R LR V ++D R Q D + + Sbjct: 72 --LFVDLPGYGFARVPEAVKREWGPMIETYLRDRECLRMVVFILDIRRDPSQEDLALKGW 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 LD VLTK DKLS Sbjct: 130 LDYYGRRTLFVLTKSDKLS 148 >gi|313669022|ref|YP_004049306.1| GTP-binding protein [Neisseria lactamica ST-640] gi|313006484|emb|CBN87947.1| putative GTP-binding protein [Neisseria lactamica 020-06] Length = 207 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/194 (39%), Positives = 103/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHTRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL R L + L++D RH Sbjct: 66 ----ELQN---GNFMVDLPGYGYAQVPEAVRSHWVNLLGDYLRYRKQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y V S Sbjct: 119 LKELDIRMLDFFHTTGRPVHILLSKSDKLSKNEQIKTLSQVKKLLKPYSERQNIGVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+KR+GIE + + + Sbjct: 179 SLKRQGIEEVGRTV 192 >gi|315038090|ref|YP_004031658.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus amylovorus GRL 1112] gi|325956543|ref|YP_004291955.1| GTP-binding protein YsxC [Lactobacillus acidophilus 30SC] gi|312276223|gb|ADQ58863.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus amylovorus GRL 1112] gi|325333108|gb|ADZ07016.1| GTP-binding protein YsxC [Lactobacillus acidophilus 30SC] gi|327183369|gb|AEA31816.1| GTP-binding protein YsxC [Lactobacillus amylovorus GRL 1118] Length = 196 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 104/188 (55%), Gaps = 12/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYLVND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ +K +G +I YL R L+ + +LID RH + D ++ + Sbjct: 70 EFYLVDVPGYGYAKVSQKRRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTKDDIAMYEY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + +V TK+DK+ + + + K L NY H V+ SSV + + L Sbjct: 130 AQYLNIPILVVCTKMDKIKKSQTNKVMSGLKKNLDLNYD--HVTVLTFSSVTKLHVAELG 187 Query: 204 KAILETIN 211 I + IN Sbjct: 188 DWIEDKIN 195 >gi|160878538|ref|YP_001557506.1| GTP-binding protein HSR1-related [Clostridium phytofermentans ISDg] gi|189037174|sp|A9KHA0|ENGB_CLOPH RecName: Full=Probable GTP-binding protein EngB gi|160427204|gb|ABX40767.1| GTP-binding protein HSR1-related [Clostridium phytofermentans ISDg] Length = 201 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 110/184 (59%), Gaps = 11/184 (5%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 +LP+ PE AF+G+SNVGKSSLIN L+NRK+ ARTS+ PG+TQ +NF+ + Sbjct: 17 VLPENTQPEFAFAGKSNVGKSSLINGLMNRKSFARTSSQPGKTQTINFYHLNE------- 69 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + VD+PGYGYA+ + WG +I +YL + L+ ++LLID RH D+D++ Sbjct: 70 --KLYFVDLPGYGYAKVSSELKAKWGKMIEKYLRTSTQLKVIFLLIDIRHEPSANDKDMY 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++ I+ TK+DK++ + + ++ + + A+ +++P SS+ ++G + + Sbjct: 128 EWIVHNGFEPVIIATKLDKINRSQRDKHIKMVRTGL--CAGANTKILPFSSLSKEGKDDI 185 Query: 203 RKAI 206 + I Sbjct: 186 WRCI 189 >gi|320157740|ref|YP_004190119.1| GTP-binding protein EngB [Vibrio vulnificus MO6-24/O] gi|119370482|sp|Q8DDQ8|ENGB_VIBVU RecName: Full=Probable GTP-binding protein EngB gi|319933052|gb|ADV87916.1| GTP-binding protein EngB [Vibrio vulnificus MO6-24/O] Length = 216 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 110/196 (56%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 72 TEGCH---------IVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + L K + L + +V SS Sbjct: 123 MKDLDQQMIFWAIESRIPVQVLLTKADKLKSGARKAELLKVRKLAETF-GGDVQVDVYSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR A L+T Sbjct: 182 LKGLGVDQLR-AKLDT 196 >gi|313893181|ref|ZP_07826758.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral taxon 158 str. F0412] gi|313442534|gb|EFR60949.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral taxon 158 str. F0412] Length = 222 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 79/187 (42%), Positives = 105/187 (56%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFSNLKN 81 P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+F +D S + Sbjct: 33 PEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINYFDIESKEDISETEE 92 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQ 139 LVD+PGYG+A+ K N + W I Y+ SER L C LLID RH ID+ Sbjct: 93 RRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLC--LLIDGRHPEMPIDK 150 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + +L + V QIV+TK DKL+ L K K + YPT P ++ SS+K G Sbjct: 151 VAYDWLVEAGVPLQIVVTKADKLTAKEKSANLAKIKEM---YPTDTPPIL-YSSLKHTGR 206 Query: 200 EVLRKAI 206 E+L++ I Sbjct: 207 ELLQQRI 213 >gi|261401329|ref|ZP_05987454.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria lactamica ATCC 23970] gi|269208713|gb|EEZ75168.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria lactamica ATCC 23970] gi|309379659|emb|CBX21830.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 207 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/194 (39%), Positives = 104/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHTRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL R L + L++D RH Sbjct: 66 ----ELQN---GNFMVDLPGYGYAQVPEAVRSHWVNLLGDYLRYRKQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y + V S Sbjct: 119 LKELDIRMLDFFHTTGRPVHILLSKSDKLSKNEQIKTLSQVKKLLKPYSERQNIGVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+KR+GIE + + + Sbjct: 179 SLKRQGIEEVGRTV 192 >gi|311031430|ref|ZP_07709520.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. m3-13] Length = 194 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 88/146 (60%), Gaps = 9/146 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ + + V Sbjct: 24 PEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYLINEM---------LHFV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ PK D+WG ++ YL+ R LR V ++D RH + D ++ +L Sbjct: 75 DVPGYGFAKVPKSERDAWGRMMETYLTNREQLRAVLQIVDLRHPPSKDDVTMYEYLKHYE 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTK 175 + ++ TK DK+ Q+ L+ K Sbjct: 135 LPVVVIATKADKIPKGKWQKHLKVIK 160 >gi|68074349|ref|XP_679089.1| GTP-binding protein [Plasmodium berghei strain ANKA] gi|56499746|emb|CAH95019.1| probable GTP-binding protein engb, putative [Plasmodium berghei] Length = 926 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 101/178 (56%), Gaps = 9/178 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM-AL 88 PEIAF GRSN GKS+LIN L R N A+ S PG T+ ++F+ K P + L Sbjct: 112 PEIAFIGRSNSGKSTLINELCGRTNKAKVSKMPGCTKQIHFY--------KIGKPCLLCL 163 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYG+A + ++ W + YL R+ L+ V++LIDCR G+K D+++F F D+ Sbjct: 164 VDLPGYGFAHSKEELRLQWNEFTLFYLKNRTNLKKVFVLIDCRIGLKTSDKELFHFFDRY 223 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + YQIVL+K D L+ ++ I ++ +I SS+KR+ + LR I Sbjct: 224 NIKYQIVLSKCDLLNTKDLAIKIQIMNEEILHFKNLEKNIISLSSLKRQNLNELRNEI 281 >gi|253751620|ref|YP_003024761.1| GTP-binding protein [Streptococcus suis SC84] gi|253753522|ref|YP_003026663.1| GTP-binding protein [Streptococcus suis P1/7] gi|253755653|ref|YP_003028793.1| GTP-binding protein [Streptococcus suis BM407] gi|251815909|emb|CAZ51523.1| putative GTP-binding protein [Streptococcus suis SC84] gi|251818117|emb|CAZ55911.1| putative GTP-binding protein [Streptococcus suis BM407] gi|251819768|emb|CAR45667.1| putative GTP-binding protein [Streptococcus suis P1/7] gi|319758058|gb|ADV70000.1| GTP-binding protein [Streptococcus suis JS14] Length = 195 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 103/207 (49%), Gaps = 16/207 (7%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 I T +A I L V + P PEIA +GRSNVGKSS IN L+ RKNLARTS PG+T Sbjct: 3 INTHNAEILLSAVSK-AQYPGYDIPEIALAGRSNVGKSSFINTLLGRKNLARTSGKPGKT 61 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNF+ D + VD+PGYGYA+ K WG +I YL+ R LR V Sbjct: 62 QQLNFYNIDD---------KIRFVDVPGYGYAKVSKTERAKWGKMIEEYLTTRENLRVVV 112 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPT 183 L+D RH D ++ FL + IV TK DK+ E++ K K Sbjct: 113 SLVDMRHEPSADDVQMYDFLKYYEIPVIIVATKADKIPRGKWNKHESMIKKKLDF----D 168 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETI 210 + + + SS R G + AIL I Sbjct: 169 KNDQFVIFSSETRHGYDQAWDAILSNI 195 >gi|27364347|ref|NP_759875.1| GTP-binding protein YsxC [Vibrio vulnificus CMCP6] gi|27360466|gb|AAO09402.1| GTP-binding protein EngB [Vibrio vulnificus CMCP6] Length = 220 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 106/190 (55%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 TEGCH---------IVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + L K + L + +V SS Sbjct: 127 MKDLDQQMIFWAIESRIPVQVLLTKADKLKSGARKAELLKVRKLAETF-GGDVQVDVYSS 185 Query: 194 VKRKGIEVLR 203 +K G++ LR Sbjct: 186 LKGLGVDQLR 195 >gi|290990283|ref|XP_002677766.1| predicted protein [Naegleria gruberi] gi|284091375|gb|EFC45022.1| predicted protein [Naegleria gruberi] Length = 142 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P+IAF+GRSNVGKSSL+N +V+ LAR S+ PG T+ +N+F D Sbjct: 14 PNEKMPQIAFAGRSNVGKSSLLNSIVDSDRLARVSSTPGHTKRINYFNMHDM-------- 65 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +VD+PGYGYA K+ + W ++ +Y +E + LR V++L+D R+G+ + D + Sbjct: 66 -LYVVDLPGYGYAEGNKEKIKGWNTVLRQYCTENTVLRRVFILLDARYGIYEQDCEFMDM 124 Query: 145 LDKKAVSYQIVLTKIDKL 162 L++ V YQI+LTK DK+ Sbjct: 125 LEESGVPYQIILTKCDKV 142 >gi|253690586|ref|YP_003019776.1| GTP-binding protein HSR1-related [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259645903|sp|C6DJE1|ENGB_PECCP RecName: Full=Probable GTP-binding protein EngB gi|251757164|gb|ACT15240.1| GTP-binding protein HSR1-related [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 211 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I L E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 12 FIISAPDIRHLATDSGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R++L+ + +L+D RH Sbjct: 72 TD---------GVRLVDLPGYGYAEVPEQMKIKWQRALGEYLQKRNSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 123 LKDLDQQMIQWAVDVELPVLVLLTKADKLASGARKAQLNMVREAVLPF-MGDIQVEAFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 182 LKKLGVDKLRQKL 194 >gi|197123177|ref|YP_002135128.1| ribosome biogenesis GTP-binding protein YsxC [Anaeromyxobacter sp. K] gi|220917966|ref|YP_002493270.1| GTP-binding protein HSR1-related [Anaeromyxobacter dehalogenans 2CP-1] gi|238689884|sp|B4UHX9|ENGB_ANASK RecName: Full=Probable GTP-binding protein EngB gi|254783182|sp|B8JEQ8|ENGB_ANAD2 RecName: Full=Probable GTP-binding protein EngB gi|196173026|gb|ACG73999.1| GTP-binding protein HSR1-related [Anaeromyxobacter sp. K] gi|219955820|gb|ACL66204.1| GTP-binding protein HSR1-related [Anaeromyxobacter dehalogenans 2CP-1] Length = 216 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 92/176 (52%), Gaps = 3/176 (1%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIAF GRSNVGKSS++N L RK LAR S+ PGRT+ L FF Sbjct: 21 PRGATPEIAFVGRSNVGKSSMLNALARRKGLARVSSTPGRTRALQFFDLSYRPTPAARPR 80 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ D+PGYGYA+ + D W +I YL +R LR V L++D RH + D+D +F Sbjct: 81 AIRFCDLPGYGYAKVARAERDRWTAMIEDYLRDRDVLRAVVLIVDARHPPSESDEDAAAF 140 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L + TK DKL L++ + R A + +P S+V+ G + Sbjct: 141 LVSAGRRLVVAATKTDKLPKARRVLALQQVE---RALGLARGDAVPFSAVEGTGTD 193 >gi|260438106|ref|ZP_05791922.1| ribosome biogenesis GTP-binding protein YsxC [Butyrivibrio crossotus DSM 2876] gi|292809587|gb|EFF68792.1| ribosome biogenesis GTP-binding protein YsxC [Butyrivibrio crossotus DSM 2876] Length = 197 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 115/192 (59%), Gaps = 19/192 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PE+AF+G+SNVGKSSLIN ++NRK+ A+TS+ PG+TQ +NF+ N+ N Sbjct: 18 LPENTLPEVAFAGKSNVGKSSLINAIMNRKSYAKTSSQPGKTQTINFY------NINN-- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ + WG +I RYLS L+ V+LLID RH + D+ ++ Sbjct: 70 -VFYCVDLPGYGYAKTTLETRAKWGKMIERYLSTSKQLQRVFLLIDIRHAPSENDRLMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGI-- 199 ++ + I+ TK+DK+ + Q+ ++ ++R E ++P S+ ++G+ Sbjct: 129 WIVSEGYEPVIIATKLDKIKRSQIQKQVK----ILREGLGMSKEGILVPFSAETKQGLEN 184 Query: 200 --EVLRKAILET 209 E++ A+L+T Sbjct: 185 IWEIIDNAVLKT 196 >gi|237807113|ref|YP_002891553.1| ribosome biogenesis GTP-binding protein YsxC [Tolumonas auensis DSM 9187] gi|259645909|sp|C4L968|ENGB_TOLAT RecName: Full=Probable GTP-binding protein EngB gi|237499374|gb|ACQ91967.1| GTP-binding protein HSR1-related [Tolumonas auensis DSM 9187] Length = 212 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 62/151 (41%), Positives = 88/151 (58%), Gaps = 9/151 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP G EIAF+GRSN GKSS +N L ++ LARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPNDGGIEIAFAGRSNAGKSSALNALTQQRQLARTSKTPGRTQLINLFEL 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA+ P + W + YL +R +L+ + LL+D RH Sbjct: 73 E---------PGKRLVDLPGYGYAQVPIEMKLKWQAALSEYLQKRESLKALVLLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 +K +D + + ++ ++LTK DKL+P Sbjct: 124 LKDLDLQMLEWASNSDLNILVLLTKADKLNP 154 >gi|281203975|gb|EFA78171.1| Putative GTP-binding protein [Polysphondylium pallidum PN500] Length = 441 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 62/131 (47%), Positives = 86/131 (65%), Gaps = 10/131 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSS+IN + R A+TS+ PG TQ +N++ L + L +V Sbjct: 217 PEVAFIGRSNVGKSSIINAITQR-GQAKTSDKPGFTQSINWY------ELGSTL---YIV 266 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A + VD W L + YL+ R +L+ V+LL+D RHG+K+ D ++ LDK+ Sbjct: 267 DLPGYGFAFAKSQKVDQWNQLTLEYLTTRKSLKRVFLLLDARHGLKESDHEILEILDKEH 326 Query: 150 VSYQIVLTKID 160 V QIVLTK D Sbjct: 327 VKTQIVLTKGD 337 >gi|294634244|ref|ZP_06712787.1| ribosome biogenesis GTP-binding protein YsxC [Edwardsiella tarda ATCC 23685] gi|291092331|gb|EFE24892.1| ribosome biogenesis GTP-binding protein YsxC [Edwardsiella tarda ATCC 23685] Length = 254 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 49 FVTSAPDIRHLPADIGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 108 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 109 DD---------GVRLVDLPGYGYAEVPEEMKRKWQRALGEYLQQRQCLKGLVVLMDIRHP 159 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ + + ++LTK DKL+ + L + + + +V SS Sbjct: 160 LKDLDQQMIAWAVEAGLPVLLLLTKADKLASGARKAQLNLVREAVLPF-MGDIQVEAFSS 218 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR + Sbjct: 219 LKKFGVDKLRDKL 231 >gi|220933280|ref|YP_002512179.1| cell division checkpoint GTPase YihA [Thioalkalivibrio sp. HL-EbGR7] gi|254783218|sp|B8GTD2|ENGB_THISH RecName: Full=Probable GTP-binding protein EngB gi|219994590|gb|ACL71192.1| cell division checkpoint GTPase YihA [Thioalkalivibrio sp. HL-EbGR7] Length = 209 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/170 (37%), Positives = 100/170 (58%), Gaps = 10/170 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS IN+L N++ LARTS PGRTQ +NFF + + LVD Sbjct: 27 EVAFAGRSNAGKSSAINVLCNQRALARTSKTPGRTQLINFFALDE---------SRRLVD 77 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P+ +W L+ YL ER+ L+ + +++D RH + D + + ++ + Sbjct: 78 LPGYGYAKVPEAMRKAWRKLMEHYLGERACLKGLVVVMDIRHPLTDHDWTMLGWARERGL 137 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + ++LTK DK+ A +T + + + V P S++KR+G+E Sbjct: 138 AVHVLLTKADKIRRGPAMDTARQVARALGDAGI-EATVQPFSALKREGVE 186 >gi|119370483|sp|Q7MQ23|ENGB_VIBVY RecName: Full=Probable GTP-binding protein EngB Length = 216 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 110/196 (56%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 72 TEGCH---------IVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + L K + L + +V SS Sbjct: 123 MKDLDQQMIFWAIESRIPVQVLLTKADKLKSGARKAELLKVRKLAETF-GGDVQVDVYSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR A L+T Sbjct: 182 LKGLGVDQLR-AKLDT 196 >gi|242241360|ref|YP_002989541.1| ribosome biogenesis GTP-binding protein YsxC [Dickeya dadantii Ech703] gi|242133417|gb|ACS87719.1| GTP-binding protein HSR1-related [Dickeya dadantii Ech703] Length = 220 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 22 FVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 81 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 82 TE---------GIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRNCLKGLVILMDIRHP 132 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 133 LKDLDQQMLEWSVDVGLPVLVLLTKADKLAQGARKAQLNMVREAVLPF-MGDIQVETFSS 191 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 192 LKKTGVDKLRQKL 204 >gi|238764291|ref|ZP_04625242.1| GTP-binding protein engB [Yersinia kristensenii ATCC 33638] gi|238697442|gb|EEP90208.1| GTP-binding protein engB [Yersinia kristensenii ATCC 33638] Length = 204 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VD---------GIRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVMLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKIGVDKLREKL 186 >gi|323484457|ref|ZP_08089823.1| hypothetical protein HMPREF9474_01574 [Clostridium symbiosum WAL-14163] gi|323692473|ref|ZP_08106707.1| GTP-binding protein [Clostridium symbiosum WAL-14673] gi|323402235|gb|EGA94567.1| hypothetical protein HMPREF9474_01574 [Clostridium symbiosum WAL-14163] gi|323503470|gb|EGB19298.1| GTP-binding protein [Clostridium symbiosum WAL-14673] Length = 195 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 90/149 (60%), Gaps = 9/149 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P+ PE AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ D Sbjct: 18 MPENTQPEFAFAGKSNVGKSSLINSLMNRKSYARISAQPGKTQTINFYHIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A+ VD+PGYGYARA + WG +I YL + LRCV+LLID RH D+ ++ Sbjct: 70 -ALYYVDLPGYGYARANVEVKAKWGKMIEDYLHQSKMLRCVFLLIDIRHEPSSNDKLMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLE 172 ++ + I+ TK DK+ + Q+ ++ Sbjct: 129 WIVSQGYQPVIIATKADKIKRSQLQKQMK 157 >gi|269959442|ref|ZP_06173825.1| GTP-binding protein [Vibrio harveyi 1DA3] gi|269835879|gb|EEZ89955.1| GTP-binding protein [Vibrio harveyi 1DA3] Length = 223 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 EE---------GCHIVDLPGYGFAQVPIEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 127 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR A L+T Sbjct: 186 LKGLGVDQLR-AKLDT 200 >gi|156972896|ref|YP_001443803.1| GTPase EngB [Vibrio harveyi ATCC BAA-1116] gi|156524490|gb|ABU69576.1| hypothetical protein VIBHAR_00574 [Vibrio harveyi ATCC BAA-1116] Length = 223 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 127 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR A L+T Sbjct: 186 LKGLGVDQLR-AKLDT 200 >gi|148543886|ref|YP_001271256.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri DSM 20016] gi|184153286|ref|YP_001841627.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri JCM 1112] gi|227364794|ref|ZP_03848842.1| GTPase [Lactobacillus reuteri MM2-3] gi|227544994|ref|ZP_03975043.1| GTPase [Lactobacillus reuteri CF48-3A] gi|300909971|ref|ZP_07127431.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri SD2112] gi|325682581|ref|ZP_08162098.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri MM4-1A] gi|166920113|sp|A5VJ95|ENGB_LACRD RecName: Full=Probable GTP-binding protein EngB gi|229807536|sp|B2G6R5|ENGB_LACRJ RecName: Full=Probable GTP-binding protein EngB gi|148530920|gb|ABQ82919.1| small GTP-binding protein [Lactobacillus reuteri DSM 20016] gi|183224630|dbj|BAG25147.1| GTP-binding protein [Lactobacillus reuteri JCM 1112] gi|227070138|gb|EEI08513.1| GTPase [Lactobacillus reuteri MM2-3] gi|227185011|gb|EEI65082.1| GTPase [Lactobacillus reuteri CF48-3A] gi|300892619|gb|EFK85979.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri SD2112] gi|324978420|gb|EGC15370.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri MM4-1A] Length = 196 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 11/184 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA GRSNVGKSSL N+L+NR+N A TS+ PG+TQ LNF+ +D Sbjct: 19 PKTNIPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYDVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + +G +I +YL++R LR V L+D RH D +++++ Sbjct: 70 KVYFVDVPGYGYAKVSKKERERFGKMIEQYLTQREQLRGVIQLVDARHEPTPDDVNMYNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TKIDK+ + L K + + ++ P +I S+ ++KG + + + Sbjct: 130 LQYYNIPTLIVGTKIDKVKRSAWNRQLSLIKKTL-DVESSTP-IILFSATEKKGKDDVWQ 187 Query: 205 AILE 208 I E Sbjct: 188 WIEE 191 >gi|251791717|ref|YP_003006438.1| ribosome biogenesis GTP-binding protein YsxC [Dickeya zeae Ech1591] gi|247540338|gb|ACT08959.1| GTP-binding protein HSR1-related [Dickeya zeae Ech1591] Length = 214 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LAR S PGRTQ +N F Sbjct: 12 FVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARISKTPGRTQLINLFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 72 TD---------GVRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRNCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 123 LKDLDQQMLEWAVDVGLPVLVLLTKADKLAQGARKSQLNMVREAVLPF-MGDIQVETFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 182 LKKTGVDKLRQKL 194 >gi|291280219|ref|YP_003497054.1| GTP-binding protein [Deferribacter desulfuricans SSM1] gi|290754921|dbj|BAI81298.1| GTP-binding protein [Deferribacter desulfuricans SSM1] Length = 191 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 12/184 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIAF GRSNVGKSS+IN LVNRK L + S PG+T+ +NFF N+ + L Sbjct: 16 PDTDLPEIAFVGRSNVGKSSMINTLVNRKKLVKVSQKPGKTRTINFF------NINDEL- 68 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ KK+ + W +I YL++RS L+ V L+ID R G D+ ++ + Sbjct: 69 --IFVDLPGYGYAKVSKKDRELWKVMIETYLTKRSQLKAVVLIIDIRVGPTNDDKLMYEW 126 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 V + TK DKLS Q+ L K + + + + SSV R+G + L Sbjct: 127 FMAYNVPTIVAFTKCDKLSNNKIQKQLAIIK---KEFGDGLGDYVLFSSVTRRGKDELWG 183 Query: 205 AILE 208 I E Sbjct: 184 IIKE 187 >gi|153833801|ref|ZP_01986468.1| GTP-binding protein [Vibrio harveyi HY01] gi|148869859|gb|EDL68827.1| GTP-binding protein [Vibrio harveyi HY01] Length = 219 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 72 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 123 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETF-GGDVSVDVFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR A L+T Sbjct: 182 LKGLGVDQLR-AKLDT 196 >gi|251782260|ref|YP_002996562.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390889|dbj|BAH81348.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 199 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 77/186 (41%), Positives = 99/186 (53%), Gaps = 11/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ PG+TQ LNFF N+ + L Sbjct: 25 PQDDLPEIALAGRSNVGKSSFINTMLGRKNLARTSSKPGKTQLLNFF------NIDDKL- 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL+ R LR V L+D RH + D ++ F Sbjct: 78 --RFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHEPSKEDVQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TK DK+ P E + +I SSV R GI+ Sbjct: 136 LKYYDIPVIIVATKADKI-PRGKWNKHESMVKKTLGFDKTDCFII-FSSVDRVGIDEAWD 193 Query: 205 AILETI 210 ILE + Sbjct: 194 TILEHL 199 >gi|171462910|ref|YP_001797023.1| GTP-binding protein HSR1-related [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692837|sp|B1XST2|ENGB_POLNS RecName: Full=Probable GTP-binding protein EngB gi|171192448|gb|ACB43409.1| GTP-binding protein HSR1-related [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 221 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 14/196 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP E+AF+GRSN GKSS IN+L N+K LA S PGRTQH+N+F Sbjct: 9 FATTVNDTHYLPATPLREVAFAGRSNAGKSSAINVLCNQKRLAFASKTPGRTQHINYFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F+ K++L A LVD+PGYGYA + W L+ YL ER L V L++D R G Sbjct: 69 --FA--KDDLLAY-LVDLPGYGYAAVNHETKYHWNTLLSDYLQEREQLVGVVLIVDSRRG 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE------ 187 + +D+ + + ++L+K DKL+ + + TLE + ++ Y A P+ Sbjct: 124 ITDLDEQMIEWFVPTGKPTHVLLSKCDKLNKSECKHTLEAVRKQLQQYDPALPDGNGESK 183 Query: 188 ---VIPTSSVKRKGIE 200 SS KR G+E Sbjct: 184 QLTAQLFSSTKRIGLE 199 >gi|326335701|ref|ZP_08201887.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692130|gb|EGD34083.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 200 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 14/200 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFV 72 F+ +I P G E AF GRSNVGKSSLIN+L N K LA+TS+ PG+TQ +N F + Sbjct: 8 FVMSNTQIAKCPAHGLAEYAFIGRSNVGKSSLINMLTNHKGLAKTSSKPGKTQLINHFLI 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K++ LVD+PGYGYA+ K++ + I Y +R L C ++L+D RH Sbjct: 68 NKNW----------YLVDLPGYGYAQVSKQSKRVFQQFITDYFKKRKELVCAFVLVDIRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++ID + +L + + + I+ TK DKL+ +E + + ++ P +S Sbjct: 118 KPQKIDLEFMQWLGENTIPFAIIFTKADKLTDKLIEEHITAYQGILLEQWEEMPPYFISS 177 Query: 193 SVKRKG-IEVLRKAILETIN 211 SV + G E+L +E IN Sbjct: 178 SVNKLGRTEILN--YIEDIN 195 >gi|304388325|ref|ZP_07370439.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria meningitidis ATCC 13091] gi|304337687|gb|EFM03842.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria meningitidis ATCC 13091] Length = 211 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 11 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHTRLAYVSKTPGRTQHINFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 68 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMDARHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y V S Sbjct: 121 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 180 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 181 SLKKQGIDEANRTV 194 >gi|95931072|ref|ZP_01313799.1| GTP-binding [Desulfuromonas acetoxidans DSM 684] gi|95132881|gb|EAT14553.1| GTP-binding [Desulfuromonas acetoxidans DSM 684] Length = 202 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 65/150 (43%), Positives = 91/150 (60%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ G P A PEIAF+GRSNVGKSSL+N++V RK+L RTS+ PGRTQ +NFF Sbjct: 8 FVKSATRPGNYPPAERPEIAFAGRSNVGKSSLLNVMVQRKSLVRTSSTPGRTQLINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + + LVD+PGYG+A+ P WG +I YL R +L V +L D R Sbjct: 66 -DLNE------EIYLVDLPGYGFAKVPMAVKKQWGPMIQTYLQSRQSLCAVVVLFDIRRV 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 ++ D + +L++ V V+TK+DK+S Sbjct: 119 PREEDLQLLDWLEEYEVPTIPVITKVDKVS 148 >gi|282850554|ref|ZP_06259933.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella parvula ATCC 17745] gi|282580047|gb|EFB85451.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella parvula ATCC 17745] Length = 232 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 80/187 (42%), Positives = 105/187 (56%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFSNLKN 81 P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+F +D S + Sbjct: 43 PEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINYFDIESKEDISETEE 102 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQ 139 LVD+PGYG+A+ K N + W I Y+ SER L C LLID RH ID+ Sbjct: 103 RRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLC--LLIDGRHPEMAIDK 160 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 F +L + V QIV+TK DKL+ +L K L YPTA ++ SS+K G Sbjct: 161 VAFDWLVEAGVPLQIVVTKADKLTAKEKSASLSIIKEL---YPTATSPIL-YSSLKHTGR 216 Query: 200 EVLRKAI 206 E+L++ I Sbjct: 217 ELLQQRI 223 >gi|238917374|ref|YP_002930891.1| GTP-binding protein [Eubacterium eligens ATCC 27750] gi|259645895|sp|C4Z1T3|ENGB_EUBE2 RecName: Full=Probable GTP-binding protein EngB gi|238872734|gb|ACR72444.1| GTP-binding protein [Eubacterium eligens ATCC 27750] Length = 211 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 15/185 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PE+AF+G+SNVGKSSLIN L+NRK+ ARTS+ PG+TQ +NF+ D Sbjct: 18 LPETPFPEVAFAGKSNVGKSSLINALMNRKSYARTSSQPGKTQTINFYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +M LVD+PGYGYA WG +I +YL + S L+ V+LLID RH D+ ++ Sbjct: 70 -SMYLVDLPGYGYANVSPAVKAKWGKMIEKYLRKSSQLKQVFLLIDIRHDPSDNDRMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ IV TK+DK+ S + Q +T +R +IP SS ++G++ Sbjct: 129 WIVNNGYRPVIVATKLDKIKRSQISKQVKAVRTGLGLRQ----EDILIPFSSQTKQGLKE 184 Query: 202 LRKAI 206 L + I Sbjct: 185 LWQLI 189 >gi|194468441|ref|ZP_03074427.1| small GTP-binding protein [Lactobacillus reuteri 100-23] gi|194453294|gb|EDX42192.1| small GTP-binding protein [Lactobacillus reuteri 100-23] Length = 196 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/184 (39%), Positives = 108/184 (58%), Gaps = 11/184 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA GRSNVGKSSL N+L+NR+N A TS+ PG+TQ LNF+ +D Sbjct: 19 PKTNIPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYDVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + +G +I +YL++R LR V L+D RH D +++++ Sbjct: 70 KVYFVDVPGYGYAKVSKKERERFGKMIEQYLTQREQLRGVIQLVDARHEPTPDDVNMYNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV TKIDK+ + L K + + ++ P +I S+ ++KG + + + Sbjct: 130 LQYYNIPTLIVGTKIDKVKRSAWNRQLSLIKKAL-DVESSTP-IILFSATEKKGKDDVWQ 187 Query: 205 AILE 208 I E Sbjct: 188 WIEE 191 >gi|145588273|ref|YP_001154870.1| GTP-binding protein, HSR1-related [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189037184|sp|A4SUZ2|ENGB_POLSQ RecName: Full=Probable GTP-binding protein EngB gi|145046679|gb|ABP33306.1| cell division checkpoint GTPase YihA [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 221 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 14/196 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP E+AF+GRSN GKSS +N+L N+K LA S PGRTQH+N+F Sbjct: 9 FATTVNDTHCLPATPLREVAFAGRSNAGKSSALNVLCNQKRLAFASKTPGRTQHINYF-- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F+ K++L A LVD+PGYGYA + W L+ YL ER L + L++D R G Sbjct: 67 GIFA--KDDLLAY-LVDLPGYGYAAVNHETKYHWNALLSDYLQEREQLVGMVLIVDARRG 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 + ++D+ + + I+L+K DKL+ + + LE + ++ Y A P+ Sbjct: 124 ITELDEQMIQWFVPTGKPIHILLSKCDKLNKSECKHALEDVRKQLQQYDPALPDGTGESQ 183 Query: 192 -------SSVKRKGIE 200 SS KR G+E Sbjct: 184 QLTAQLFSSTKRIGLE 199 >gi|255319822|ref|ZP_05361027.1| GTPase EngB [Acinetobacter radioresistens SK82] gi|262380354|ref|ZP_06073508.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter radioresistens SH164] gi|255303141|gb|EET82353.1| GTPase EngB [Acinetobacter radioresistens SK82] gi|262297800|gb|EEY85715.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter radioresistens SH164] Length = 278 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 108/199 (54%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 47 FLMSAPKLSLCVEDTGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFF-- 104 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 105 ----SLGN--PDQRLVDLPGYGYAAVPETMKIVWQKELENYLIHRESLQGLVLLMDIRHP 158 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A +TL + K ++ + SS Sbjct: 159 LQHFDTMMLEWAHSRKLFVHILLTKADKLNRGPANKTLLEVKQELKKMKLNFS-IQLFSS 217 Query: 194 VKRKGIEVLRKAILETINY 212 + ++G+E L + +N+ Sbjct: 218 LNKQGLEELASVMAGRLNF 236 >gi|261365666|ref|ZP_05978549.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria mucosa ATCC 25996] gi|288565832|gb|EFC87392.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria mucosa ATCC 25996] Length = 217 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 104/196 (53%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + SN +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 66 -ELSN------GSFMVDLPGYGYAQVPEAIRTHWVKLLGDYLQQRRQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K++D + F I+L+K DKLS +TL K ++ Y T V S Sbjct: 119 LKELDLRMLDFFHITGRPVHILLSKADKLSKNEQIKTLGTVKKSLKPYMTRQRISVQLFS 178 Query: 193 SVKRKGIEVLRKAILE 208 S+K++GIE + + + E Sbjct: 179 SLKKQGIEEVNQVVGE 194 >gi|21674964|ref|NP_663029.1| GTPase EngB [Chlorobium tepidum TLS] gi|25452938|sp|Q8KAK5|ENGB_CHLTE RecName: Full=Probable GTP-binding protein EngB gi|21648196|gb|AAM73371.1| GTP-binding protein [Chlorobium tepidum TLS] Length = 192 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 66/152 (43%), Positives = 89/152 (58%), Gaps = 12/152 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G PEI F GRSNVGKSSL+N L RK LA+TS+ PG+T+ +N+F+ D Sbjct: 18 LPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFIIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYGYA+ + +SWG L+ Y+ +R + V LL+D RH D ++ Sbjct: 70 -NLYFVDLPGYGYAKVGQGERESWGKLLTGYIQKRGEIALVVLLVDSRHPGMASDLEMME 128 Query: 144 FLDKKAVSYQIVLTKIDKL---SPTTAQETLE 172 FLD + IVLTK DKL + A T+E Sbjct: 129 FLDYCGRPFGIVLTKWDKLKQAEKSKASRTIE 160 >gi|225389278|ref|ZP_03759002.1| hypothetical protein CLOSTASPAR_03024 [Clostridium asparagiforme DSM 15981] gi|225044657|gb|EEG54903.1| hypothetical protein CLOSTASPAR_03024 [Clostridium asparagiforme DSM 15981] Length = 206 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 112/193 (58%), Gaps = 19/193 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PE AFSG+SNVGKSSLIN L+NRK ARTS+ PG+TQ +NF+ D Sbjct: 18 LPENHLPEFAFSGKSNVGKSSLINALMNRKAYARTSSQPGKTQTINFYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A+ VD+PGYGYA+ + + WG +I RYL + L+ V+LL+D RH D+ ++ Sbjct: 70 -ALYYVDLPGYGYAKVALEAKEKWGKMIERYLRQSPMLKMVFLLVDIRHEPSANDKSMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIE- 200 ++ I+ TK+DK++ + Q+ ++ L+R + +IP S+ ++G E Sbjct: 129 WIVYNGYHPVIIATKLDKINRSQIQKQVK----LLRQGLGMDKDGILIPFSAETKQGREK 184 Query: 201 ---VLRKAILETI 210 ++ + + ET+ Sbjct: 185 IWDLIERVMAETV 197 >gi|291520784|emb|CBK79077.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Coprococcus catus GD/7] Length = 204 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 21/190 (11%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PE+AFSG+SNVGKSSLIN L+NRK AR S PG+TQ +N++ D Sbjct: 18 LPENQHPEVAFSGKSNVGKSSLINGLMNRKAYARVSQQPGKTQTINYYNVND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + +VD+PGYG+A + WG +I YL + LR V+LL+D RH D+ ++S Sbjct: 70 -EIYIVDLPGYGFANVSQAVKAKWGKMIENYLRKSRQLRMVFLLVDIRHEPSANDKHMYS 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSSVKRKGIE 200 ++ + I+ TK+DK+ + Q+ L+ LIR N P ++P S+V ++G Sbjct: 129 WIIENGFYPAIIATKLDKIKRSQVQKQLK----LIREGLNVAEGTP-IVPYSAVTKQG-- 181 Query: 201 VLRKAILETI 210 R I E I Sbjct: 182 --RDEIWELI 189 >gi|301300955|ref|ZP_07207120.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851422|gb|EFK79141.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus salivarius ACS-116-V-Col5a] Length = 196 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A PE+A +GRSNVGKSSLIN L+NR+N ARTS+ PG+TQ LNF+ +D Sbjct: 19 PDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQTLNFYNIEDL-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ +K + W +I Y S R L+ L+D RH ++D + F Sbjct: 71 -LYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSELDCQMIEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TKIDK+ Sbjct: 130 LHYYNIPVLVVGTKIDKI 147 >gi|90961519|ref|YP_535435.1| GTP-binding protein [Lactobacillus salivarius UCC118] gi|119369208|sp|Q1WUI3|ENGB_LACS1 RecName: Full=Probable GTP-binding protein EngB gi|90820713|gb|ABD99352.1| GTP-binding protein [Lactobacillus salivarius UCC118] gi|300214356|gb|ADJ78772.1| Probable GTP-binding protein engB [Lactobacillus salivarius CECT 5713] Length = 196 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A PE+A +GRSNVGKSSLIN L+NR+N ARTS+ PG+TQ LNF+ +D Sbjct: 19 PDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQTLNFYNIEDL-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ +K + W +I Y S R L+ L+D RH ++D + F Sbjct: 71 -LYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSELDCQMIEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TKIDK+ Sbjct: 130 LHYYNIPVLVVGTKIDKI 147 >gi|209521070|ref|ZP_03269801.1| GTP-binding protein HSR1-related [Burkholderia sp. H160] gi|209498489|gb|EDZ98613.1| GTP-binding protein HSR1-related [Burkholderia sp. H160] Length = 220 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+ Sbjct: 10 FFTTVNHLRDLPANAQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINY--- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K + P LVD+PGYGYA P W L+ YL RS LR + L++D R Sbjct: 67 --FSVGKADEPTAYLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMILMMDSRRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPT 191 + ++D+ + + +LTK DKL+ + L + + Y A E+ Sbjct: 125 LTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESTNALRTAQKGLAEYRAAGYRGELTAQ 184 Query: 192 --SSVKRKGIEVLRKAI 206 S++KR G++ + I Sbjct: 185 LFSALKRTGLDEAHELI 201 >gi|42573726|ref|NP_974959.1| GTP binding [Arabidopsis thaliana] gi|222423373|dbj|BAH19659.1| AT5G58370 [Arabidopsis thaliana] gi|332009661|gb|AED97044.1| putative GTP-binding protein CGPA [Arabidopsis thaliana] Length = 465 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 108/190 (56%), Gaps = 11/190 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEIAF+GRSNVGKSSL+N L + + RTS+ PG TQ +NFF Sbjct: 283 FPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFF---------GLG 333 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + LVD+PGYG+A A + ++W L+ Y+S R++L+ V LL+D + G+K DQ++ + Sbjct: 334 PKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTKWGMKPRDQELIN 393 Query: 144 FLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ YQIVLTK D + P A+ ++ + L N P ++ SS GI L Sbjct: 394 LMERSNTKYQIVLTKTDVVFPIDVARRAMQIEEKLKANRSIVQP-LMMVSSRSGAGIGSL 452 Query: 203 RKAILETINY 212 R A+ + + Sbjct: 453 RTALAKIARF 462 >gi|312865357|ref|ZP_07725585.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus downei F0415] gi|311099468|gb|EFQ57684.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus downei F0415] Length = 199 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+NRK LARTS+ PG+TQ LNF+ D Sbjct: 25 PQDDLPEVALAGRSNVGKSSFINTLLNRKKLARTSSKPGKTQLLNFYNIDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL R LR V L+D RH D ++ F Sbjct: 76 KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDNLRVVVSLVDLRHEPTADDVQMYDF 135 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + IV TK DK+ QE+L K K N+ ++ +S K +G ++ Sbjct: 136 LKYYGIPVIIVATKADKVPRGKWNKQESLIKKKL---NFDKQDSFIVFSSETK-EGYDLA 191 Query: 203 RKAILETI 210 ILE + Sbjct: 192 WDTILEKL 199 >gi|325133582|gb|EGC56243.1| GTP-binding protein [Neisseria meningitidis M13399] Length = 209 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 66 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWFNLLGDYLQQRKQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y V S Sbjct: 119 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 179 SLKKQGIDEANRTV 192 >gi|218261711|ref|ZP_03476446.1| hypothetical protein PRABACTJOHN_02114 [Parabacteroides johnsonii DSM 18315] gi|218223845|gb|EEC96495.1| hypothetical protein PRABACTJOHN_02114 [Parabacteroides johnsonii DSM 18315] Length = 198 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 13/187 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L +K LA TS PG+T +N F+ Sbjct: 19 PAGNLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTMLINHFLING--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYG+A+ K+ ++ +I Y+ ER L +++LIDCRH ++ID + + Sbjct: 70 QWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLIDCRHEPQKIDLEFMEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + + ++ TKIDK+S QE L+ + + P ++ +SS K++G R Sbjct: 130 LGENGIPFSLIFTKIDKISKGRLQENLKAYQTKLLESWEELPPILLSSSEKKEG----RD 185 Query: 205 AILETIN 211 IL+ I+ Sbjct: 186 EILDYID 192 >gi|119475280|ref|ZP_01615633.1| GTP-binding protein XF1430 [marine gamma proteobacterium HTCC2143] gi|119451483|gb|EAW32716.1| GTP-binding protein XF1430 [marine gamma proteobacterium HTCC2143] Length = 202 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 102/182 (56%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P E+AF+GRSN GKSS IN L + K +ARTS PGRTQ LNFF D + Sbjct: 24 PSDDGCEVAFAGRSNAGKSSAINTLTDNKRMARTSKTPGRTQLLNFF---DVGERQR--- 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYG+A+ P + W + YL ER +L + LL+DCRH +++ D+ + ++ Sbjct: 78 ---LVDLPGYGFAKVPLAVKEKWQRHLGEYLRERESLAGLVLLMDCRHPLQEFDRMMLAW 134 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + I+LTK DKL A L K + ++ ++ S++KR G++ LR+ Sbjct: 135 AEGCEMPVHILLTKADKLKKGPANSVLLKVREELKQQELVSIQLF--SALKRTGLDQLRE 192 Query: 205 AI 206 + Sbjct: 193 KL 194 >gi|305664545|ref|YP_003860832.1| putative GTP-binding protein [Maribacter sp. HTCC2170] gi|88708562|gb|EAR00798.1| putative GTP-binding protein [Maribacter sp. HTCC2170] Length = 203 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 105/199 (52%), Gaps = 11/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P PE AF GRSNVGKSSLIN+L RK+LA+TS PG+TQ +N F Sbjct: 8 FVMSNSDVAKCPNEPLPEYAFIGRSNVGKSSLINMLTERKSLAKTSGRPGKTQLINHF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N LVD+PGYGYAR KK+ ++ I Y +R L ++L+D RH Sbjct: 66 ----KINGNW---FLVDLPGYGYARVSKKDKRTFQKYITDYFIKRKQLVSAFVLVDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 +++D + +L + + + I+ TK DKL P + + K L+ P TS Sbjct: 119 PQKVDMEFMEYLGENMIPFSIIFTKADKLKPKQMEANVNSYVKELLNGVWEEAPNYFVTS 178 Query: 193 SVKRKGIEVLRKAILETIN 211 S K G + L I E+IN Sbjct: 179 SSKNMGRDELLHYI-ESIN 196 >gi|171778306|ref|ZP_02919512.1| hypothetical protein STRINF_00354 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283006|gb|EDT48430.1| hypothetical protein STRINF_00354 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 203 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 102/188 (54%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ N+ + L Sbjct: 29 PQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFY------NIDDKL- 81 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG +I YL R LR V L+D RH D ++ F Sbjct: 82 --RFVDVPGYGYAKVSKAERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDPSADDIQMYEF 139 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K N+ + V+ SSV R G++ Sbjct: 140 LKYYEIPVIVVATKADKIPHGKWNKHESAIKKKL---NFDKSDKFVV-FSSVDRTGLDEA 195 Query: 203 RKAILETI 210 +ILE + Sbjct: 196 WDSILEEL 203 >gi|56964398|ref|YP_176129.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus clausii KSM-K16] gi|81822069|sp|Q5WEP2|ENGB_BACSK RecName: Full=Probable GTP-binding protein EngB gi|56910641|dbj|BAD65168.1| GTP-binding protein [Bacillus clausii KSM-K16] Length = 197 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 9/147 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE+A +GRSNVGKSS IN ++NRK LARTS PG+TQ LNF+ + Sbjct: 19 PKNQLPELALAGRSNVGKSSFINKMLNRKGLARTSGQPGKTQTLNFYEINE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K +WG +I YLSER L+ V L+D RH + DQ ++++ Sbjct: 70 RLYFVDVPGYGYAKVSKTERAAWGKMIETYLSEREELKAVLQLVDIRHRPSEDDQLMYNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETL 171 + + +V TK DK+ Q+ L Sbjct: 130 MKHYGIPVILVATKADKIPKGKWQKQL 156 >gi|238897343|ref|YP_002923020.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259645900|sp|C4K8N5|ENGB_HAMD5 RecName: Full=Probable GTP-binding protein EngB gi|229465098|gb|ACQ66872.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 205 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 72/193 (37%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P I LP E+AF+GRSN GKSS +N L +KNLA+ S PGRTQ +N F Sbjct: 13 FVMSAPNIHHLPPDQGMEVAFAGRSNAGKSSALNTLTQQKNLAKISKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P W + YL++R LR + +L+D RH Sbjct: 73 AE---------GIRLVDLPGYGYAAVPLAIKIKWQKALNEYLNKRDCLRGLVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + K + ++LTK+DKLS + ++ L+ K I + EV SS Sbjct: 124 LKNLDQQMIVWAINKRIPVYLLLTKVDKLSRSASKIQLDMVKEAILPF-MGDIEVDVFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ GI+ L+ + Sbjct: 183 LKKIGIDKLQNKL 195 >gi|227113277|ref|ZP_03826933.1| GTPase EngB [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327117|ref|ZP_03831141.1| GTPase EngB [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 203 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I L E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 4 FIISAPDIRHLATDSGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFQV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R++L+ + +L+D RH Sbjct: 64 VD---------GVRLVDLPGYGYAEVPEQMKIKWQRALGEYLQKRNSLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 115 LKDLDQQMIQWAVDVQLPVLVLLTKADKLASGARKTQLNMVREAVLPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKLGVDKLRQKL 186 >gi|227890606|ref|ZP_04008411.1| GTPase [Lactobacillus salivarius ATCC 11741] gi|227867544|gb|EEJ74965.1| GTPase [Lactobacillus salivarius ATCC 11741] Length = 196 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A PE+A +GRSNVGKSSLIN L+NR+N ARTS+ PG+TQ LNF+ +D Sbjct: 19 PDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQTLNFYNIEDL-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ +K + W +I Y S R L+ L+D RH ++D + F Sbjct: 71 -LYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPSELDCQMIEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TKIDK+ Sbjct: 130 LHYYNIPVLVVGTKIDKI 147 >gi|257065891|ref|YP_003152147.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus prevotii DSM 20548] gi|256797771|gb|ACV28426.1| GTP-binding protein HSR1-related [Anaerococcus prevotii DSM 20548] Length = 195 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 13/189 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+AF GRSNVGKSS IN + RK LA+TS+ PG+T+ +NF+ D Sbjct: 19 PREDLPELAFVGRSNVGKSSFINSFLCRKKLAKTSSVPGKTRTINFYRIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK W LI YL +R LR V+LL+D RH +D+ ++ + Sbjct: 70 KFRLVDLPGYGYAKVSKKEKAKWDKLINEYLHQREALREVFLLVDIRHEPTALDKQMYDW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI-PTSSVKRKGIEVLR 203 + + + ++ TK DK+ + Q+ + K +++ +I SS + +VL Sbjct: 130 IRETGFTGFVIATKFDKIKKSQTQKHI---KQIMKKLEIDDEGLIFAYSSETKHNKDVLE 186 Query: 204 KAILETINY 212 + + INY Sbjct: 187 EQVDVIINY 195 >gi|154482726|ref|ZP_02025174.1| hypothetical protein EUBVEN_00403 [Eubacterium ventriosum ATCC 27560] gi|149736321|gb|EDM52207.1| hypothetical protein EUBVEN_00403 [Eubacterium ventriosum ATCC 27560] Length = 195 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 105/187 (56%), Gaps = 11/187 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP EIAF+G+SNVGKSSLIN LVNRK LARTS+ PG+TQ +NF+ N Sbjct: 18 LPDNQLCEIAFAGKSNVGKSSLINGLVNRKALARTSSQPGKTQTINFY---------NVN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYGYA K + WG +I RYL E L+ V+LLID RH D +++ Sbjct: 69 KELYFVDLPGYGYANVSLKVKEQWGKMIERYLHESQVLKAVFLLIDIRHEPSANDVNMYQ 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ I+ TK DK+ + Q+ ++ K + P +V+ S++ ++G + + Sbjct: 129 WILANGYEPIIIATKADKIKRSQLQKHIKMIKTELNVVPGT--KVLTFSALTKQGKDEIL 186 Query: 204 KAILETI 210 I E + Sbjct: 187 DLIEEIV 193 >gi|89891777|ref|ZP_01203279.1| GTP-binding cell division protein EngB [Flavobacteria bacterium BBFL7] gi|89515932|gb|EAS18597.1| GTP-binding cell division protein EngB [Flavobacteria bacterium BBFL7] Length = 200 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 72/185 (38%), Positives = 97/185 (52%), Gaps = 10/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + E AF GRSNVGKSSLIN+L N+K+LA+TS PG+TQ +N F+ Sbjct: 19 PDSKLAEYAFIGRSNVGKSSLINMLTNKKSLAKTSGRPGKTQLINHFLINK--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR K + + I Y +R L C ++L+D RH + ID + + Sbjct: 70 SWHLVDLPGYGYARVSKSSKAKFQKFITNYFQQRRQLVCAFVLVDVRHEPQPIDTEFMEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLE-KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + + + IV TK DKL P + +E K L+ P TSS G E L Sbjct: 130 LGENGIPFGIVFTKADKLKPNALERNVEVYKKQLLDGVWEEVPPYFITSSSNGTGQEELL 189 Query: 204 KAILE 208 I E Sbjct: 190 NYIGE 194 >gi|71894660|ref|YP_278768.1| GTPase EngB [Mycoplasma synoviae 53] gi|119369218|sp|Q4A5B4|ENGB_MYCS5 RecName: Full=Probable GTP-binding protein EngB gi|71851448|gb|AAZ44057.1| putative GTP-binding protein [Mycoplasma synoviae 53] Length = 187 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 69/146 (47%), Positives = 86/146 (58%), Gaps = 10/146 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 EIAF GRSNVGKSSL+N L + K LA+ S PGRTQ +NFF N V Sbjct: 20 SEIAFWGRSNVGKSSLLNALTS-KGLAKVSKTPGRTQLINFF---------ENELNQVYV 69 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K D +I YL RS L+ +YLLID R G +ID ++ SFL + Sbjct: 70 DLPGYGYAKLSKDLKDKMMAMIEEYLLNRSNLKMLYLLIDSRLGFTKIDLEILSFLKENN 129 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTK 175 ++Y IV TKIDKL+ E +K K Sbjct: 130 LNYFIVFTKIDKLNTKEKNELNKKIK 155 >gi|313890490|ref|ZP_07824118.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pseudoporcinus SPIN 20026] gi|313121007|gb|EFR44118.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pseudoporcinus SPIN 20026] Length = 199 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 99/188 (52%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN ++ RKNLARTS PG+TQ LNFF D Sbjct: 25 PQDDIPEVALAGRSNVGKSSFINTILGRKNLARTSAKPGKTQLLNFFNIDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL R LR V L+D RH D ++ F Sbjct: 76 KIRFVDVPGYGYAKVSKTERARWGKMIEEYLVNRENLRVVVSLVDLRHEPSGEDVQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E + K K N+ ++ + I SSV R GI+ Sbjct: 136 LKYYEIPVIVVATKADKIPRGKWNKHEAMVKKKL---NFDSS-DQFIIFSSVNRLGIDQA 191 Query: 203 RKAILETI 210 +IL I Sbjct: 192 WDSILAMI 199 >gi|163791245|ref|ZP_02185661.1| GTP-binding protein [Carnobacterium sp. AT7] gi|159873515|gb|EDP67603.1| GTP-binding protein [Carnobacterium sp. AT7] Length = 195 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 83/138 (60%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA +GRSNVGKSS IN ++NRK LARTS PG+TQ LN+++ +D Sbjct: 19 PSTGLPEIALAGRSNVGKSSFINTMINRKGLARTSGKPGKTQTLNYYIIED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG ++ Y ++R TL+ ++D RH + D ++ F Sbjct: 70 SFYFVDVPGYGYAKVSKTERAKWGQMLEVYFTQRETLKVALSVVDLRHPPTEDDVQMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L ++ +V TK DK+ Sbjct: 130 LKYHSIPVIVVATKADKI 147 >gi|83315808|ref|XP_730953.1| GTP-binding protein EngB [Plasmodium yoelii yoelii str. 17XNL] gi|23490838|gb|EAA22518.1| probable GTP-binding protein engb, putative [Plasmodium yoelii yoelii] Length = 951 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 9/188 (4%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 ++ LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ ++F+ Sbjct: 103 KVNELPLPKYPEIAFIGRSNSGKSTLINELCGRSNKAKVSKMPGCTKQIHFY-------- 154 Query: 80 KNNLPAM-ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 K P + LVD+PGYG+A + ++ W + YL R+ L+ V++LIDCR G+K D Sbjct: 155 KIGKPCLLCLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRTNLKKVFVLIDCRIGLKTSD 214 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +++F F D+ + YQIVL+K D L+ ++ I ++ +I SS+KR+ Sbjct: 215 KELFHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIMNEEIVHFKNLEKNIISLSSLKRQN 274 Query: 199 IEVLRKAI 206 + LR I Sbjct: 275 LNELRNEI 282 >gi|291542676|emb|CBL15786.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus bromii L2-63] Length = 200 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 106/204 (51%), Gaps = 14/204 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F + A+ F G + LP++ PEI FSG SNVGKSSLIN LV RK LAR S PG+T Sbjct: 3 FNEVAFEFAAG--RVDQLPESDMPEIVFSGHSNVGKSSLINKLVQRKALARVSAQPGKTA 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ K+F +VD+PGYGYA+ K D W L+ Y ++ V Sbjct: 61 TINFYKLKEFR----------MVDLPGYGYAKVSKAEKDRWAKLVEGYFAQDRQRPLVIQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D RH D + FL + ++ VLTK DKL T ++ +E K + H Sbjct: 111 ILDLRHPPTDDDLHMIDFLYRGGFNFAAVLTKSDKLKKTAFEKQIEYYKDIFST--IEHV 168 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 +IP S+ G + +RK I +I Sbjct: 169 PLIPFSAQTGFGNDEIRKLIETSI 192 >gi|257790850|ref|YP_003181456.1| GTP-binding protein HSR1-related [Eggerthella lenta DSM 2243] gi|317488439|ref|ZP_07946992.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp. 1_3_56FAA] gi|325831912|ref|ZP_08165009.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp. HGA1] gi|257474747|gb|ACV55067.1| GTP-binding protein HSR1-related [Eggerthella lenta DSM 2243] gi|316912483|gb|EFV34039.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp. 1_3_56FAA] gi|325486233|gb|EGC88685.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp. HGA1] Length = 193 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 100/182 (54%), Gaps = 14/182 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF+GRSNVGKSSL+N L NRK LA+ S PG+T +NFF + + V Sbjct: 24 PEIAFAGRSNVGKSSLLNKLFNRKGLAKVSQTPGKTATINFF----------SCDGVRFV 73 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K + W LI Y ++ L V L+D RH +D ++ FL + Sbjct: 74 DLPGYGYAKVSKSDKSRWSELIEGYFNQDRDLALVVSLVDIRHEASDLDVNMIGFLQEAE 133 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKGIEVLRKAILE 208 + + +VLTK DKLS Q+ +++ L + A ++ SS K GI+ LR I Sbjct: 134 LPFAVVLTKADKLS---RQQQMKQKAALKKQLKLGADVPLVVCSSEKGTGIDELRSLIKN 190 Query: 209 TI 210 ++ Sbjct: 191 SV 192 >gi|320546907|ref|ZP_08041209.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equinus ATCC 9812] gi|320448425|gb|EFW89166.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equinus ATCC 9812] Length = 197 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 99/188 (52%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ D Sbjct: 23 PQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDD--------- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL R LR V L+D RH D ++ F Sbjct: 74 KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDPSADDIQMYEF 133 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K N+ +I SSV R G++ Sbjct: 134 LKYYEIPVIVVATKADKIPRGKWNKHESAIKKKL---NFDKTDKFII-FSSVDRTGLDES 189 Query: 203 RKAILETI 210 +ILE + Sbjct: 190 WDSILEEL 197 >gi|18310371|ref|NP_562305.1| GTPase EngB [Clostridium perfringens str. 13] gi|110800363|ref|YP_696084.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium perfringens ATCC 13124] gi|168207810|ref|ZP_02633815.1| GTP-binding protein [Clostridium perfringens E str. JGS1987] gi|168215329|ref|ZP_02640954.1| GTP-binding protein [Clostridium perfringens CPE str. F4969] gi|168217820|ref|ZP_02643445.1| GTP-binding protein [Clostridium perfringens NCTC 8239] gi|169342290|ref|ZP_02863368.1| GTP-binding protein [Clostridium perfringens C str. JGS1495] gi|24418379|sp|Q8XKK5|ENGB_CLOPE RecName: Full=Probable GTP-binding protein EngB gi|119369185|sp|Q0TQK6|ENGB_CLOP1 RecName: Full=Probable GTP-binding protein EngB gi|18145051|dbj|BAB81095.1| probable GTP binding protein [Clostridium perfringens str. 13] gi|110675010|gb|ABG83997.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium perfringens ATCC 13124] gi|169299617|gb|EDS81676.1| GTP-binding protein [Clostridium perfringens C str. JGS1495] gi|170660856|gb|EDT13539.1| GTP-binding protein [Clostridium perfringens E str. JGS1987] gi|170713286|gb|EDT25468.1| GTP-binding protein [Clostridium perfringens CPE str. F4969] gi|182380168|gb|EDT77647.1| GTP-binding protein [Clostridium perfringens NCTC 8239] Length = 197 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 65/140 (46%), Positives = 83/140 (59%), Gaps = 11/140 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV-PKDFSNLKNNL 83 P PEIAF GRSNVGKSS+IN L NR+ LA+ S PG+T+ +NFF+ KDF Sbjct: 19 PDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRLINFFLLNKDF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ KK SWG I RYL R L+ V LL+DCRH D ++ Sbjct: 72 ---YLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTADDVQMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLS 163 ++ ++ TK DK+S Sbjct: 129 WIKHYGYEVVVIATKSDKIS 148 >gi|237747394|ref|ZP_04577874.1| GTP-binding protein EngB [Oxalobacter formigenes HOxBLS] gi|229378745|gb|EEO28836.1| GTP-binding protein EngB [Oxalobacter formigenes HOxBLS] Length = 237 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 102/206 (49%), Gaps = 12/206 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-- 71 F R + LP+ PEIAF GRSN GKSS IN L N+KNLA S PGRTQH+NFF Sbjct: 20 FFRTANHLRDLPRLNVPEIAFVGRSNAGKSSAINTLCNQKNLAYASRTPGRTQHINFFSI 79 Query: 72 -----VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 + N + LVD+PGYGYA+ + W L+ YL R L + L Sbjct: 80 GGAHVAQHRHDPVDENKVELFLVDLPGYGYAQISGTAKEHWQKLLSDYLITRPQLSGLIL 139 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTA 184 ++D RH + +D + + +LTK DKL+ + E L++ ++R+Y Sbjct: 140 VMDSRHPFQPLDVSLLEWFAVTGKPIHCLLTKADKLNRRESSEALKQVDTILRSYIDENG 199 Query: 185 HPEVIPT---SSVKRKGIEVLRKAIL 207 HP SS KR G++ IL Sbjct: 200 HPFPFSAQLFSSTKRTGLKEATAFIL 225 >gi|121634279|ref|YP_974524.1| GTPase EngB [Neisseria meningitidis FAM18] gi|161869414|ref|YP_001598581.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria meningitidis 053442] gi|218767611|ref|YP_002342123.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria meningitidis Z2491] gi|12644640|sp|Q9JVW1|ENGB_NEIMA RecName: Full=Probable GTP-binding protein EngB gi|166225965|sp|A1KS92|ENGB_NEIMF RecName: Full=Probable GTP-binding protein EngB gi|189037181|sp|A9M1V2|ENGB_NEIM0 RecName: Full=Probable GTP-binding protein EngB gi|120865985|emb|CAM09722.1| putative GTP-binding protein [Neisseria meningitidis FAM18] gi|121051619|emb|CAM07919.1| putative GTP-binding protein [Neisseria meningitidis Z2491] gi|161594967|gb|ABX72627.1| GTP-binding protein [Neisseria meningitidis 053442] gi|319409871|emb|CBY90184.1| putative GTP-binding protein EngB [Neisseria meningitidis WUE 2594] gi|325127554|gb|EGC50477.1| GTP-binding protein [Neisseria meningitidis N1568] gi|325129546|gb|EGC52370.1| GTP-binding protein [Neisseria meningitidis OX99.30304] gi|325131453|gb|EGC54160.1| GTP-binding protein [Neisseria meningitidis M6190] gi|325135590|gb|EGC58207.1| GTP-binding protein [Neisseria meningitidis M0579] gi|325137560|gb|EGC60141.1| GTP-binding protein [Neisseria meningitidis ES14902] gi|325141674|gb|EGC64134.1| GTP-binding protein [Neisseria meningitidis 961-5945] gi|325197693|gb|ADY93149.1| GTP-binding protein [Neisseria meningitidis G2136] Length = 209 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 66 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y V S Sbjct: 119 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 179 SLKKQGIDEANRTV 192 >gi|254670022|emb|CBA04791.1| GTP-binding protein [Neisseria meningitidis alpha153] gi|261393144|emb|CAX50756.1| putative GTP-binding protein EngB [Neisseria meningitidis 8013] gi|308389904|gb|ADO32224.1| GTPase EngB [Neisseria meningitidis alpha710] gi|325143809|gb|EGC66125.1| GTP-binding protein [Neisseria meningitidis M01-240013] gi|325201549|gb|ADY97003.1| GTP-binding protein [Neisseria meningitidis M01-240149] gi|325206723|gb|ADZ02176.1| GTP-binding protein [Neisseria meningitidis M04-240196] gi|325207530|gb|ADZ02982.1| GTP-binding protein [Neisseria meningitidis NZ-05/33] Length = 209 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 104/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 66 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y + V S Sbjct: 119 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 179 SLKKQGIDEANRTV 192 >gi|182627119|ref|ZP_02954837.1| hypothetical protein CJD_0168 [Clostridium perfringens D str. JGS1721] gi|177907508|gb|EDT70166.1| hypothetical protein CJD_0168 [Clostridium perfringens D str. JGS1721] Length = 197 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 65/140 (46%), Positives = 83/140 (59%), Gaps = 11/140 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV-PKDFSNLKNNL 83 P PEIAF GRSNVGKSS+IN L NR+ LA+ S PG+T+ +NFF+ KDF Sbjct: 19 PDNNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRLINFFLLNKDF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ KK SWG I RYL R L+ V LL+DCRH D ++ Sbjct: 72 ---YLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTADDVQMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLS 163 ++ ++ TK DK+S Sbjct: 129 WIKHYGYEVVVIATKSDKIS 148 >gi|110802133|ref|YP_698700.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium perfringens SM101] gi|119369186|sp|Q0ST57|ENGB_CLOPS RecName: Full=Probable GTP-binding protein EngB gi|110682634|gb|ABG86004.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium perfringens SM101] Length = 197 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 65/140 (46%), Positives = 83/140 (59%), Gaps = 11/140 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV-PKDFSNLKNNL 83 P PEIAF GRSNVGKSS+IN L NR+ LA+ S PG+T+ +NFF+ KDF Sbjct: 19 PDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRLINFFLLNKDF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ KK SWG I RYL R L+ V LL+DCRH D ++ Sbjct: 72 ---YLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHKPTADDVQMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLS 163 ++ ++ TK DK+S Sbjct: 129 WIKHYGYEVVVIATKSDKIS 148 >gi|332523732|ref|ZP_08399984.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus porcinus str. Jelinkova 176] gi|332314996|gb|EGJ27981.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus porcinus str. Jelinkova 176] Length = 199 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 76/188 (40%), Positives = 99/188 (52%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++ RKNLARTS PG+TQ LNFF D Sbjct: 25 PQDNIPEIALAGRSNVGKSSFINTILGRKNLARTSAKPGKTQLLNFFNIDD--------- 75 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL R LR V L+D RH D ++ F Sbjct: 76 KIRFVDVPGYGYAKVSKTERARWGKMIEEYLVNRENLRVVVSLVDLRHEPSGEDVQMYEF 135 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E + K K N+ + + + I SSV R GI+ Sbjct: 136 LKYYEIPVIVVATKADKIPRGKWNKHEAMVKKKL---NFDS-NDQFIIFSSVDRLGIDQA 191 Query: 203 RKAILETI 210 +IL + Sbjct: 192 WDSILAMV 199 >gi|296159592|ref|ZP_06842416.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. Ch1-1] gi|295890300|gb|EFG70094.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. Ch1-1] Length = 217 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 100/197 (50%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEI F+GRSN GKS+ INIL N+K LA S PGRTQH+N+ Sbjct: 10 FFTTVNHLRDLPATSQPEICFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINY--- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K P LVD+PGYGYA P W L+ YL RS LR + L++D R Sbjct: 67 --FSVGKAEEPTAHLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMILMMDSRRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPT 191 + +D+ + + +LTK DKL+ + L T+ + Y A E+ Sbjct: 125 LTDLDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVNALRATQKGLAEYRAAGYRGELTAQ 184 Query: 192 --SSVKRKGIEVLRKAI 206 S++KR GI+ + I Sbjct: 185 LFSALKRIGIDEAHELI 201 >gi|317050145|ref|YP_004117793.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. At-9b] gi|316951762|gb|ADU71237.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. At-9b] Length = 213 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 70/196 (35%), Positives = 107/196 (54%), Gaps = 16/196 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVLSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLF-- 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 69 -------EVVEGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRQALKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP---EVIP 190 +K +DQ + + + + ++LTK DKL+ + L ++R A +V Sbjct: 122 LKDLDQQMIEWAVQSEIPVLVLLTKADKLASGARKAQLN----MVREASLAFQGDVQVEM 177 Query: 191 TSSVKRKGIEVLRKAI 206 SS+K+ G++ LR+ + Sbjct: 178 FSSLKKLGVDKLRQKL 193 >gi|255067338|ref|ZP_05319193.1| ribosome biogeneis GTP-binding protein YsxC [Neisseria sicca ATCC 29256] gi|255048489|gb|EET43953.1| ribosome biogeneis GTP-binding protein YsxC [Neisseria sicca ATCC 29256] Length = 217 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 76/194 (39%), Positives = 103/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + SN +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 66 -ELSN------GSFMVDLPGYGYAQVPEAIRTHWVKLLGDYLQQRRQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K++D + F I+L+K DKLS +TL K ++ Y T V S Sbjct: 119 LKELDLRMLDFFHITGRPVHILLSKADKLSKNEQIKTLGSVKKSLKPYMTRQRISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++GIE + + + Sbjct: 179 SLKKQGIEEVNQVV 192 >gi|225009961|ref|ZP_03700433.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C] gi|225005440|gb|EEG43390.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C] Length = 204 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 102/190 (53%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + PK PE AF GRSNVGKSSLIN+L ++K+LA+TS PG+TQ +N F Sbjct: 8 FVMSNAHVEKCPKDPIPEYAFIGRSNVGKSSLINMLTSKKSLAKTSGRPGKTQLINHF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N LVD+PGYGYAR K++ ++ I Y +R+ L C ++L+D RH Sbjct: 66 ----KINQN---WFLVDLPGYGYARVSKRDKKTFQKYITEYFLKRTQLVCAFVLVDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ-ETLEKTKYLIRNYPTAHPEVIPTS 192 + +D D ++ + + + I+ TK DKL P + T + L PE TS Sbjct: 119 PQPVDLDFMRWMGENEIPFCIIFTKADKLKPAIIEANTKAYNEKLTEEIFELAPEHFITS 178 Query: 193 SVKRKGIEVL 202 S K G E L Sbjct: 179 SSKHLGKEEL 188 >gi|116333988|ref|YP_795515.1| GTPase EngB [Lactobacillus brevis ATCC 367] gi|122269328|sp|Q03QN8|ENGB_LACBA RecName: Full=Probable GTP-binding protein EngB gi|116099335|gb|ABJ64484.1| Predicted GTPase [Lactobacillus brevis ATCC 367] Length = 197 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 62/139 (44%), Positives = 84/139 (60%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA GRSNVGKSSL N+L+NR + ARTS+ PG+TQ LNF+ +D Sbjct: 19 PTTGYPEIALVGRSNVGKSSLTNVLINRNSYARTSSQPGKTQTLNFYNVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + WG +I YL++R LR V L+D RH + D ++ + Sbjct: 70 QLYFVDVPGYGYAKVSKTEREKWGQMIETYLTQRDQLRGVISLVDARHAPTEDDIQMYRW 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L + IV TK DK++ Sbjct: 130 LAYYELPTLIVATKSDKIA 148 >gi|281203575|gb|EFA77772.1| hypothetical protein PPL_09270 [Polysphondylium pallidum PN500] Length = 410 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 111/208 (53%), Gaps = 29/208 (13%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP--------GRTQHLNFFVPKD 75 P + P+IAF GRSNVGKSSL+N L+ + +A S P G T+ +NF+ D Sbjct: 161 FPASPLPQIAFIGRSNVGKSSLLNTLLGDQ-MAHVSKTPVTINNYNYGCTKSINFYALWD 219 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL-----------SERSTLRCV 124 + +VD+PGYGY++ K WG I YL E++ L+ + Sbjct: 220 ---------KIMMVDLPGYGYSKVSKDKASVWGRSISEYLLTSHHCKLNLLFEKTRLKKL 270 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +LL+D R G+++ D +V LD+ V++Q++LTKIDK + T + + K I N + Sbjct: 271 FLLVDSRVGLQKNDIEVMKLLDEHRVAFQVILTKIDKATTTGLKRFYNQVKEEIMNNVSC 330 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETINY 212 P +I SS + KGI+ +R ILE N+ Sbjct: 331 VPNIIQCSSKEMKGIQQIRSVILEVTNF 358 >gi|297793371|ref|XP_002864570.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297310405|gb|EFH40829.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 467 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 108/190 (56%), Gaps = 11/190 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEIAF+GRSNVGKSSL+N L + + RTS+ PG TQ +NFF Sbjct: 285 FPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFF---------GLG 335 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + LVD+PGYG+A A + ++W L+ Y+S R++L+ V LL+D + G+K DQ++ + Sbjct: 336 PKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTKWGMKPRDQELIN 395 Query: 144 FLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ YQIVLTK D + P A+ ++ + L N P ++ SS GI L Sbjct: 396 LMERSNTKYQIVLTKTDVVFPMDVARRAMQIEEKLKANRSIVQP-LMMVSSRSGAGIGSL 454 Query: 203 RKAILETINY 212 R A+ + + Sbjct: 455 RTALAKIARF 464 >gi|295100722|emb|CBK98267.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Faecalibacterium prausnitzii L2-6] Length = 204 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 14/200 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + K+ +I G+ LP++ PE++FSGRSNVGKSSLIN L NRKNLAR S+ PG+T Sbjct: 3 YNKADFIASYGIS--SQLPESDRPELSFSGRSNVGKSSLINKLCNRKNLARVSSTPGKTA 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ D VD+PGYGYA+ + + W LI Y + + Sbjct: 61 TINFYAVDD----------CYFVDLPGYGYAKVSNADRERWDDLINSYFEAQRHHTLLVQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LIDCRH D + +L + + + LTK DKL + +T E+ + L P Sbjct: 111 LIDCRHAPSADDIQMLHYLHYHNIPFVVALTKADKLKKSQLAQTREEFETLC--LPYGCQ 168 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 +V+ TS GI L+ + Sbjct: 169 KVVLTSGESGCGIPELQAVL 188 >gi|296273481|ref|YP_003656112.1| ribosome biogenesis GTP-binding protein YsxC [Arcobacter nitrofigilis DSM 7299] gi|296097655|gb|ADG93605.1| ribosome biogenesis GTP-binding protein YsxC [Arcobacter nitrofigilis DSM 7299] Length = 202 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 109/199 (54%), Gaps = 17/199 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ I P EIAF GRSNVGKSSL+N L NRK LA++S+ PG+TQ +N+F Sbjct: 8 FMQSAQSISDSPGPDVAEIAFLGRSNVGKSSLLNTLTNRKGLAKSSSTPGKTQLINYFNI 67 Query: 74 KDFSNLKNNLPA---MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 K ++ +N +P VD+PG+GYA+ K W + YL +R L+ LID Sbjct: 68 KFKTDEENGMPPDLFARFVDLPGFGYAKVSKSLKAEWNKNLTNYLEQRPNLQMFIHLIDA 127 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIV---LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID++V FL+K Q++ TK DKL Q L K K R Y PE Sbjct: 128 RHPELEIDKNVDEFLEKIKRGDQLIVHAFTKTDKLK----QNDLAKLK---REY----PE 176 Query: 188 VIPTSSVKRKGIEVLRKAI 206 I S++K++GI L+ I Sbjct: 177 GIFISNLKKRGISDLQNKI 195 >gi|260599982|ref|YP_003212553.1| GTP-binding protein YsxC [Cronobacter turicensis z3032] gi|260219159|emb|CBA34514.1| Probable GTP-binding protein engB [Cronobacter turicensis z3032] Length = 220 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 20 FVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 79 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 80 AD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHP 130 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + +V SS Sbjct: 131 LKDLDQQMIEWAVDSDIPVLVLLTKADKLASGARKAQLNMVREAALAF-NGDVQVEAFSS 189 Query: 194 VKRKGIEVLR 203 +K+ G++ LR Sbjct: 190 LKKSGVDKLR 199 >gi|328957598|ref|YP_004374984.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium sp. 17-4] gi|328673922|gb|AEB29968.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium sp. 17-4] Length = 195 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA +GRSNVGKSS IN ++NRK LARTS PG+TQ LN+++ +D Sbjct: 19 PNTGLPEIALAGRSNVGKSSFINTMINRKGLARTSGKPGKTQTLNYYIIED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K WG ++ Y ++R TL+ ++D RH + D ++ F Sbjct: 70 TFYFVDVPGYGYAKVSKTERAKWGQMLETYFTQRDTLKAALSVVDLRHPPTEDDVQMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L ++ ++ TK DK+ Sbjct: 130 LKYHSIPVIVIATKADKI 147 >gi|229825759|ref|ZP_04451828.1| hypothetical protein GCWU000182_01122 [Abiotrophia defectiva ATCC 49176] gi|229790322|gb|EEP26436.1| hypothetical protein GCWU000182_01122 [Abiotrophia defectiva ATCC 49176] Length = 198 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/186 (38%), Positives = 108/186 (58%), Gaps = 17/186 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P+ PE AF+G+SNVGKSSLIN L+NRK LAR S PG+TQ +N++ D Sbjct: 18 IPEMPHPEFAFAGKSNVGKSSLINALMNRKALARVSAQPGKTQTINYYNVND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGY + + WG ++ +YL + L+ V+LLID RH + D ++ Sbjct: 70 -EIYLVDLPGYGYTKVAVEVKAKWGKMVEKYLRQSKMLKYVFLLIDSRHKPSENDIMMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLE---KTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ + V+ IV TKIDKL + + +E KT L T+ +++P SS + G++ Sbjct: 129 WIVSQGVNPIIVATKIDKLKRSQIKGQMELIIKTLNL-----TSKEQLLPFSSETKAGVK 183 Query: 201 VLRKAI 206 L + I Sbjct: 184 ELWEII 189 >gi|146313732|ref|YP_001178806.1| cell division checkpoint GTPase YihA [Enterobacter sp. 638] gi|166920112|sp|A4WGC5|ENGB_ENT38 RecName: Full=Probable GTP-binding protein EngB gi|145320608|gb|ABP62755.1| cell division checkpoint GTPase YihA [Enterobacter sp. 638] Length = 208 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+++LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPPDTGIEVAFAGRSNAGKSSALNTLTNQRSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 AE---------GKRLVDLPGYGYAEVPEEVKLKWQKALGEYLEKRQCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L+ + + ++ SS Sbjct: 122 LKDLDQQMIHWAVASEIPVLVLLTKSDKLASGARKAQLKMVREAALAF-NGDVQIETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++VLR+ + Sbjct: 181 LKKQGVDVLRQKL 193 >gi|306831537|ref|ZP_07464695.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426322|gb|EFM29436.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 213 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ D Sbjct: 39 PQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDD--------- 89 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL R LR V L+D RH D ++ F Sbjct: 90 KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDPSADDVQMYDF 149 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K N+ + +I SSV R G++ Sbjct: 150 LKYYEIPVIVVATKADKIPRGKWNKHESAIKKKL---NFDKSDKFII-FSSVDRTGLDES 205 Query: 203 RKAILETI 210 +IL+ + Sbjct: 206 WDSILDEL 213 >gi|295399411|ref|ZP_06809393.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus thermoglucosidasius C56-YS93] gi|294978877|gb|EFG54473.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus thermoglucosidasius C56-YS93] Length = 193 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ + ++ V Sbjct: 24 PEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYLINE---------SLYFV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ KK ++WG ++ Y + R LR V L++D RH + D ++ FL Sbjct: 75 DVPGYGFAKVSKKEREAWGKMMETYFTTREQLRAVVLIVDLRHPPTKDDVMMYEFLKHYE 134 Query: 150 VSYQIVLTKIDKL 162 + IV TK DK+ Sbjct: 135 IPAIIVATKADKV 147 >gi|288905455|ref|YP_003430677.1| GTP-binding protein [Streptococcus gallolyticus UCN34] gi|325978445|ref|YP_004288161.1| ribosome biogenesis GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732181|emb|CBI13746.1| putative GTP-binding protein [Streptococcus gallolyticus UCN34] gi|325178373|emb|CBZ48417.1| engB, yihA, ysxC; ribosome biogenesis GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 197 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ D Sbjct: 23 PQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDD--------- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL R LR V L+D RH D ++ F Sbjct: 74 KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDPSADDVQMYDF 133 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K N+ + +I SSV R G++ Sbjct: 134 LKYYEIPVIVVATKADKIPRGKWNKHESAIKKKL---NFDKSDKFII-FSSVDRTGLDES 189 Query: 203 RKAILETI 210 +IL+ + Sbjct: 190 WDSILDEL 197 >gi|288553615|ref|YP_003425550.1| GTP-binding protein YsxC [Bacillus pseudofirmus OF4] gi|288544775|gb|ADC48658.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pseudofirmus OF4] Length = 195 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 61/147 (41%), Positives = 87/147 (59%), Gaps = 9/147 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA +GRSNVGKSS IN ++NRK+LARTS PG+TQ LNF+ + Sbjct: 19 PNTPLPEIALAGRSNVGKSSFINKMINRKSLARTSQRPGKTQTLNFYAINE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+A+ KK ++WG +I Y+ +R LR V LID RH + D+ ++ + Sbjct: 70 QLHFVDVPGYGFAKVSKKEREAWGKMIETYIQQREQLRAVVQLIDVRHKPTEDDKLMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETL 171 L + ++ TK DK+ Q+ L Sbjct: 130 LKHFDIPVIVIATKCDKIPKGKWQKHL 156 >gi|296840815|ref|ZP_06863497.2| ribosome biogenesis GTP-binding protein YsxC [Neisseria polysaccharea ATCC 43768] gi|296839902|gb|EFH23840.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria polysaccharea ATCC 43768] Length = 210 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 104/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 11 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 68 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVKLLGDYLQQRKQLIGLILIMDARHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y + V S Sbjct: 121 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 180 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 181 SLKKQGIDETNRTV 194 >gi|114776792|ref|ZP_01451835.1| GTP-binding protein [Mariprofundus ferrooxydans PV-1] gi|114552878|gb|EAU55309.1| GTP-binding protein [Mariprofundus ferrooxydans PV-1] Length = 202 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 107/201 (53%), Gaps = 22/201 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ V + G P P+IA +G SNVGKSSL+N L R L +TS PG T+ LN F Sbjct: 17 FVQSVADPGAFPAVDLPQIAVAGHSNVGKSSLMNALFGRNGLVKTSKNPGCTRLLNLF-- 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYGYARAPKK W +I YL+ + ++ V LL+D RHG Sbjct: 75 -DVDG------QLLVVDLPGYGYARAPKKEQHRWISMIEGYLAN-ADIKLVLLLLDIRHG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT----AQETLEKTKYLIRNYPTAHPEVI 189 K D + +L++ + + V TK DKLS + QE + L+R + Sbjct: 127 PKDSDLQLIEWLNEAGIRWLPVATKADKLSGNSRSIRLQEMTDAMGGLLRP--------M 178 Query: 190 PTSSVKRKGIEVLRKAILETI 210 PTSS K GI+ LR I + + Sbjct: 179 PTSSFKATGIDQLRAVIQDEL 199 >gi|163802213|ref|ZP_02196108.1| GTP-binding protein [Vibrio sp. AND4] gi|159174018|gb|EDP58828.1| GTP-binding protein [Vibrio sp. AND4] Length = 223 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 107/190 (56%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 QEGCH---------IVDLPGYGFAQVPIEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + V SS Sbjct: 127 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKVRKQAETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLR 203 +K G++ LR Sbjct: 186 LKGLGVDQLR 195 >gi|82703200|ref|YP_412766.1| GTPase EngB [Nitrosospira multiformis ATCC 25196] gi|119369223|sp|Q2Y797|ENGB_NITMU RecName: Full=Probable GTP-binding protein EngB gi|82411265|gb|ABB75374.1| cell division checkpoint GTPase YihA [Nitrosospira multiformis ATCC 25196] Length = 235 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 12/188 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V E+ LP EIAF+GRSN GKSS IN L NR LA S PGRTQHLNFF Sbjct: 9 FYTTVNELRDLPPPVGVEIAFAGRSNAGKSSAINTLANRNRLAFVSKTPGRTQHLNFF-- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L N+ LVD+PGYGYA+ P + W L+ YL R +L + L++D RH Sbjct: 67 ----RLGND---RFLVDLPGYGYAKVPAEVRQHWERLLGTYLQTRQSLHGMVLIMDARHP 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPTS 192 + +D+ + ++ + ++LTK DKL+ Q+ L+ +L +YP ++ S Sbjct: 120 LTPLDRQMLAWFAPTKKAVHVLLTKSDKLTRQQGQKVLKTVLGFLRESYPQCSVQLF--S 177 Query: 193 SVKRKGIE 200 S R+G++ Sbjct: 178 STSREGVK 185 >gi|114322004|ref|YP_743687.1| cell division checkpoint GTPase YihA [Alkalilimnicola ehrlichii MLHE-1] gi|119368788|sp|Q0A4P0|ENGB_ALHEH RecName: Full=Probable GTP-binding protein EngB gi|114228398|gb|ABI58197.1| cell division checkpoint GTPase YihA [Alkalilimnicola ehrlichii MLHE-1] Length = 206 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 12/188 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ +P E+AF+GRSNVGKSS IN L N+K+LARTS PGRTQ +N F Sbjct: 10 FLTSAPDLRRMPPDQGREVAFAGRSNVGKSSAINTLTNQKSLARTSKTPGRTQLINVFPI 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + ALVD+PGYGYA+ P W ++ YL+ R LR V L++D RH Sbjct: 70 TDEA---------ALVDLPGYGYAKVPAAVRRRWDQVLPEYLAGRRALRGVVLVMDLRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIPTS 192 + D+ + + V ++LTK DK A+ + +R +P ++ S Sbjct: 121 LTDFDRQMLDWCGHIGVPLHVLLTKADKFKAGAARNRGQNVGRQLRAEWPGVTWQIF--S 178 Query: 193 SVKRKGIE 200 + KR G++ Sbjct: 179 ASKRMGVD 186 >gi|262373530|ref|ZP_06066808.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter junii SH205] gi|262311283|gb|EEY92369.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter junii SH205] Length = 258 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 106/199 (53%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDTGYEIAFAGRSNAGKSSAINALTNKKQLARASKRPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPEAMKIVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A +TL K ++ + SS Sbjct: 158 LQHFDLMMLEWAHSRHLFVHILLTKADKLNRGPANKTLLDVKQQLKKMKLDFS-IQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + R G+E L + +NY Sbjct: 217 LNRIGLEELASVMGGRLNY 235 >gi|224003151|ref|XP_002291247.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973023|gb|EED91354.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 175 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 11/153 (7%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F+ G + P+A E+AF GRSNVGKSSL+N+L NRK+LA TS PG+TQ N+F Sbjct: 25 VFVTGAVGMDGCPEADRGEVAFIGRSNVGKSSLVNMLTNRKSLAFTSKTPGKTQQFNYFA 84 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 N+ P +A G+G+A+ P+K W + +Y +R TLR V+ LID RH Sbjct: 85 V-------NDKPELARQIRYGFGFAKVPQKQRQQWSDFMEQYFEQRETLRIVFHLIDARH 137 Query: 133 GVKQIDQDVF----SFLDKKAVSYQIVLTKIDK 161 G D ++ + L K Y I+LTK DK Sbjct: 138 GPTDEDSNIMKKVSTILGSKKAQYVIILTKADK 170 >gi|167464640|ref|ZP_02329729.1| GTPase EngB [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383228|ref|ZP_08057039.1| YsxC-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152497|gb|EFX45283.1| YsxC-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 204 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 11/188 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA +GRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LN+++ Sbjct: 19 PTDALPEIALAGRSNVGKSSLINRLINRKNLARTSSQPGKTQTLNYYLINQ--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG I YL +R L+ V LID RH + DQ ++++ Sbjct: 70 DLYFVDLPGYGYAKVSKAKRAEWGKFIENYLLKREPLKLVLQLIDLRHPPTKDDQAMYAW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V TK DK+ Q+ + K + + H +I SS +G E L Sbjct: 130 LKHHKLPVCVVTTKADKIPKGKWQKHCKVIKETLEFEKSDH--MIVFSSETGQGKEELWS 187 Query: 205 AILETINY 212 I I + Sbjct: 188 FIENKIGW 195 >gi|254804379|ref|YP_003082600.1| GTP-binding protein [Neisseria meningitidis alpha14] gi|254667921|emb|CBA04098.1| GTP-binding protein [Neisseria meningitidis alpha14] Length = 221 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 66 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y V S Sbjct: 119 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 179 SLKKQGIDEANRTV 192 >gi|220932326|ref|YP_002509234.1| GTP-binding protein HSR1-related [Halothermothrix orenii H 168] gi|254783200|sp|B8CY70|ENGB_HALOH RecName: Full=Probable GTP-binding protein EngB gi|219993636|gb|ACL70239.1| GTP-binding protein HSR1-related [Halothermothrix orenii H 168] Length = 199 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/160 (42%), Positives = 91/160 (56%), Gaps = 11/160 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PE AFSGRSNVGKSSLIN LVNR+ LARTS+ PGRTQ +NFF D Sbjct: 18 FPTHNWPEFAFSGRSNVGKSSLINTLVNRRKLARTSSRPGRTQSINFFNIDD-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYG+A P+K + WG LI YL+ R L + ++D RH + D + Sbjct: 70 -RFYLVDLPGYGFANVPRKVKEEWGRLIEGYLNNRPNLAGIVQIVDARHKPTRDDLMMVD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNY 181 ++ + I TK+DK+S + QE L K ++ ++ Sbjct: 129 WIKASGIPCLIAATKVDKISRGSRKKQEELIKKTLVLEDF 168 >gi|255553339|ref|XP_002517711.1| GTP binding protein, putative [Ricinus communis] gi|223543109|gb|EEF44643.1| GTP binding protein, putative [Ricinus communis] Length = 489 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 10/158 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF+GRSNVGKSSL+N L + +ARTS+ PG TQ +NFF + P + LV Sbjct: 299 PEIAFAGRSNVGKSSLLNALTRQWGVARTSDKPGLTQTINFF---------SLGPKLCLV 349 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A ++ D+W L+ Y+S R L+ V LLID + G+K D ++ + +++ Sbjct: 350 DLPGYGFAYAKEEVKDAWEDLVKEYVSTRVGLKRVCLLIDTKWGMKPRDHELINLMERSQ 409 Query: 150 VSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHP 186 YQIVLTK D + P A+ ++ + L N P Sbjct: 410 TKYQIVLTKTDVVFPIDVARRAMQIEESLKANKSIVQP 447 >gi|262377319|ref|ZP_06070543.1| GTPase EngB [Acinetobacter lwoffii SH145] gi|262307772|gb|EEY88911.1| GTPase EngB [Acinetobacter lwoffii SH145] Length = 315 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/199 (36%), Positives = 109/199 (54%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 47 FLMSAPKLSLCVEDTGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFF-- 104 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+K W + YL R +L+ + LL+D RH Sbjct: 105 ----SLGN--PDQRLVDLPGYGYAAVPEKMKLVWQKELENYLIHRQSLQGLVLLMDIRHP 158 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + ++LTK DKL+ A + L++ K ++ + SS Sbjct: 159 LQHFDVMMLEWAYSRQLFVHVLLTKSDKLNRGPASKALQEVKAALKKMKLDFS-IQLFSS 217 Query: 194 VKRKGIEVLRKAILETINY 212 + ++G+E L + +N+ Sbjct: 218 MNKQGLEELASVMGGRLNF 236 >gi|332978063|gb|EGK14801.1| ribosome biogenesis GTP-binding protein YsxC [Desmospora sp. 8437] Length = 200 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 67/155 (43%), Positives = 91/155 (58%), Gaps = 9/155 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA +GRSNVGKSSLIN L++RKNLARTS+ PG+TQ +NF+ Sbjct: 19 PADALPEIALAGRSNVGKSSLINRLIHRKNLARTSSKPGKTQTINFYRING--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ DMPGYG+A+ PK +WG +I YLS R LR V +ID RH + D ++ + Sbjct: 70 ALFFADMPGYGFAKVPKSVKAAWGRMIEGYLSNRDELRGVIQVIDVRHPPTRDDVAMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 L + IV TK DK+ Q+ L++ + +R Sbjct: 130 LKHYRMPTMIVATKADKIPRGRWQKHLKQVREGLR 164 >gi|238797622|ref|ZP_04641118.1| GTP-binding protein engB [Yersinia mollaretii ATCC 43969] gi|238718486|gb|EEQ10306.1| GTP-binding protein engB [Yersinia mollaretii ATCC 43969] Length = 207 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VD---------GVRLVDLPGYGYAEVPEEMKIKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKIGVDKLREKL 186 >gi|162420510|ref|YP_001604665.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis Angola] gi|238687242|sp|A9QYI0|ENGB_YERPG RecName: Full=Probable GTP-binding protein EngB gi|162353325|gb|ABX87273.1| putative GTP-binding protein EngB [Yersinia pestis Angola] Length = 216 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 73 VD---------GVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 124 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGACKAQLNLVREAIIPF-MGDIQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 183 LKKIGVDKLREKL 195 >gi|293393656|ref|ZP_06637966.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291423991|gb|EFE97210.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 267 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 64 FVTSAPDIRHLPADAGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 123 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D + LVD+PGYGYA P++ W + YL R+ L+ + +L+D RH Sbjct: 124 ED---------GIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNCLKGLVVLMDIRHP 174 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++LTK DKL+ + + + + + +V P SS Sbjct: 175 LKDLDQQMIQWAVDVGTPVLVLLTKADKLASGARKAQVNMVREAVLAF-MGDIQVEPFSS 233 Query: 194 VKRKGIEVLRKAI 206 K+ G++ L + + Sbjct: 234 PKKIGVDKLSQKL 246 >gi|167769426|ref|ZP_02441479.1| hypothetical protein ANACOL_00756 [Anaerotruncus colihominis DSM 17241] gi|167668394|gb|EDS12524.1| hypothetical protein ANACOL_00756 [Anaerotruncus colihominis DSM 17241] Length = 202 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 98/186 (52%), Gaps = 14/186 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP + PEIAF+GRSNVGKSS+IN L NRK LAR S PG+T +NFF Sbjct: 18 LPPSELPEIAFAGRSNVGKSSMINKLFNRKQLARVSAVPGKTATINFF----------RA 67 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + D+PGYGYA+ K W LI Y + LR V+ LID RH D + + Sbjct: 68 DGLRFADLPGYGYAKVSKGEKRRWSELISGYFEQDRDLRLVFQLIDMRHAPTAGDLTMIN 127 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV-IPTSSVKRKGIEVL 202 ++ + + + +VLTK DKLS T + + L P A V IP SS +G++ + Sbjct: 128 YMIDREIPFVVVLTKADKLSKT---QRAVRLAALETELPCADQIVTIPFSSETGEGVDAV 184 Query: 203 RKAILE 208 R + + Sbjct: 185 RDVVAQ 190 >gi|12644641|sp|Q9JY03|ENGB_NEIMB RecName: Full=Probable GTP-binding protein EngB gi|316984404|gb|EFV63377.1| putative GTPase [Neisseria meningitidis H44/76] gi|325200868|gb|ADY96323.1| GTP-binding protein [Neisseria meningitidis H44/76] Length = 209 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTINHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 66 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y + V S Sbjct: 119 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 179 SLKKQGIDEANRTV 192 >gi|52426052|ref|YP_089189.1| GTPase EngB [Mannheimia succiniciproducens MBEL55E] gi|81609396|sp|Q65R06|ENGB_MANSM RecName: Full=Probable GTP-binding protein EngB gi|52308104|gb|AAU38604.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 205 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/152 (42%), Positives = 86/152 (56%), Gaps = 9/152 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ I LPK EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FMTSAANIHQLPKDEGMEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL R L+ V +L+D RH Sbjct: 73 E---------PQYKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQHRECLKGVVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSSDLPVLLLLTKADKLSQS 155 >gi|238785636|ref|ZP_04629614.1| GTP-binding protein engB [Yersinia bercovieri ATCC 43970] gi|238713471|gb|EEQ05505.1| GTP-binding protein engB [Yersinia bercovieri ATCC 43970] Length = 208 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VD---------GVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKIGVDKLREKL 186 >gi|306833688|ref|ZP_07466815.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus bovis ATCC 700338] gi|304424458|gb|EFM27597.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus bovis ATCC 700338] Length = 213 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 100/188 (53%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ D Sbjct: 39 PQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDD--------- 89 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL R LR V L+D RH D ++ F Sbjct: 90 KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDLRHEPSADDVQMYDF 149 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + +V TK DK+ E+ K K N+ + +I SSV R G++ Sbjct: 150 LKYYEIPVIVVATKADKIPRGKWNKHESAIKKKL---NFNKSDKFII-FSSVDRTGLDES 205 Query: 203 RKAILETI 210 +IL+ + Sbjct: 206 WDSILDEL 213 >gi|260914707|ref|ZP_05921172.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella dagmatis ATCC 43325] gi|260631211|gb|EEX49397.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella dagmatis ATCC 43325] Length = 205 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/153 (42%), Positives = 88/153 (57%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +LP+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRVLPEDSGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L V +L+D RH Sbjct: 73 E---------PKCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGVVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + I+LTK DKLS + Sbjct: 124 LKDLDQQMVEWAISADLPVLILLTKADKLSQSA 156 >gi|163787480|ref|ZP_02181927.1| GTP-binding protein [Flavobacteriales bacterium ALC-1] gi|159877368|gb|EDP71425.1| GTP-binding protein [Flavobacteriales bacterium ALC-1] Length = 204 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 11/188 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E+ PK PE AF GRSNVGKSSLIN+L +RK+LA+TS PG+TQ +N F+ Sbjct: 8 FVVSNSEVAKCPKDSLPEYAFIGRSNVGKSSLINMLTDRKSLAKTSGRPGKTQLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYAR K + + I Y +R L ++L+D RH Sbjct: 68 NE---------SWYLVDLPGYGYARVSKSSKKKFQKFITNYFEKRQQLISAFVLVDIRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 + ID + +L + + + I+ TK DKL P + + L++ + P+ TS Sbjct: 119 PQPIDLEFMQYLGESGIPFGIIFTKADKLKPMAIDRHVNNYCEELLKTWEEV-PQYFVTS 177 Query: 193 SVKRKGIE 200 S K G E Sbjct: 178 SSKHIGKE 185 >gi|15677644|ref|NP_274803.1| GTPase EngB [Neisseria meningitidis MC58] gi|7227060|gb|AAF42143.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|325139627|gb|EGC62166.1| GTP-binding protein [Neisseria meningitidis CU385] Length = 211 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 11 FFTTINHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 68 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMDARHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y + V S Sbjct: 121 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 180 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 181 SLKKQGIDEANRTV 194 >gi|254515981|ref|ZP_05128041.1| GTP-binding protein EngB [gamma proteobacterium NOR5-3] gi|219675703|gb|EED32069.1| GTP-binding protein EngB [gamma proteobacterium NOR5-3] Length = 231 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 94/174 (54%), Gaps = 11/174 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S ++ K+ FL ++ P E+AF+GRSN GKSS IN L LARTS Sbjct: 17 ISKPVYRKAE--FLTSAAKVSQCPDDSGWEVAFAGRSNAGKSSAINSLTQNHKLARTSKT 74 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +NFF + +VD+PGYGYA+ P+K W + YL ER +L Sbjct: 75 PGRTQLINFFTVGE---------QQRIVDLPGYGYAKVPQKLKQDWTRQMEAYLQERQSL 125 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 R + LL DCRH ++ D + + + + ++LTK DKLS ++TL K + Sbjct: 126 RGLILLSDCRHPLQPFDLQMLGWAAEAEMPVHMLLTKCDKLSNGAGKQTLLKVR 179 >gi|255076201|ref|XP_002501775.1| predicted protein [Micromonas sp. RCC299] gi|226517039|gb|ACO63033.1| predicted protein [Micromonas sp. RCC299] Length = 430 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/174 (40%), Positives = 105/174 (60%), Gaps = 17/174 (9%) Query: 9 KSAWIFLRGVPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 K A F+ LP+A PE+AF+GRSNVGKSSLIN V AR+S+ PG+TQ Sbjct: 203 KKATKFVAAATTENDLPEADDDIPEVAFAGRSNVGKSSLINA-VTCSGAARSSDVPGKTQ 261 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNF+ D S + ++DMPGYG+A A ++ V++W L+ +YL+ R L+ VY+ Sbjct: 262 SLNFY---DVSR------RIRIIDMPGYGFAFAAQEKVEAWNRLMDKYLTGRKNLKRVYV 312 Query: 127 LIDCRHGVKQIDQDVFSFLDKKA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++D RHG+K D+++ +FL + V+Y +VL K D + P L + +LIR Sbjct: 313 VVDARHGLKAPDREMLAFLSRYGNVAYSVVLNKTDLVRPA----DLARRCFLIR 362 >gi|257784166|ref|YP_003179383.1| small GTP-binding protein [Atopobium parvulum DSM 20469] gi|257472673|gb|ACV50792.1| small GTP-binding protein [Atopobium parvulum DSM 20469] Length = 194 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 99/186 (53%), Gaps = 13/186 (6%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 I LP PE+AF GRSNVGKSSL+N L+ RK LAR S+ PG+T ++NFF Sbjct: 17 ISQLPSPETPEVAFVGRSNVGKSSLLNKLIGRKQLARVSSVPGKTANINFF--------- 67 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 ++ + VD+PGYG+AR ++ W LI Y + + V L+D RH +++D Sbjct: 68 -DVDGVKFVDLPGYGFARVSRQEKQRWADLIGGYFEQERSFNLVISLVDIRHEAQKLDLQ 126 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +FL + + + + TK DK++ + L + + + I TSS GI+ Sbjct: 127 MINFLQEAELPFVVAFTKADKIARGKQNQA---AAALRKAFHITPEQTIITSSETGLGID 183 Query: 201 VLRKAI 206 LR+ I Sbjct: 184 ELRRRI 189 >gi|172058153|ref|YP_001814613.1| ribosome biogenesis GTP-binding protein YsxC [Exiguobacterium sibiricum 255-15] gi|229807534|sp|B1YJV8|ENGB_EXIS2 RecName: Full=Probable GTP-binding protein EngB gi|171990674|gb|ACB61596.1| small GTP-binding protein [Exiguobacterium sibiricum 255-15] Length = 193 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/177 (38%), Positives = 98/177 (55%), Gaps = 11/177 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+A +GRSNVGKSS IN LV RK LARTS+ PG+TQ LNFF D + V Sbjct: 24 PEVALAGRSNVGKSSFINKLVQRKALARTSSKPGKTQTLNFFNIND---------EVMFV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K ++WG ++ +Y + R L+ V LL+D RH D ++ FL Sbjct: 75 DVPGYGYAKVSKTEREAWGKMMEKYFTTREILKGVVLLVDIRHEPSADDVIMYDFLKYYD 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +S +V TK+DK+ + + K ++ IP SS +G++ +AI Sbjct: 135 LSVIVVATKLDKIKRGQRDKQIAAIKRKLQF--DGQDTFIPFSSETGEGVDAAWEAI 189 >gi|170016866|ref|YP_001727785.1| GTPase [Leuconostoc citreum KM20] gi|238688953|sp|B1MXT9|ENGB_LEUCK RecName: Full=Probable GTP-binding protein EngB gi|169803723|gb|ACA82341.1| Predicted GTPase [Leuconostoc citreum KM20] Length = 194 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 63/141 (44%), Positives = 87/141 (61%), Gaps = 9/141 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA GRSNVGKSSL N L+ RKN ARTS+ PG+TQ LNF+ +++N L Sbjct: 19 PTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTLNFY------DVENQL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ KK +++G +I Y++ R LR V L+D RH + D ++ + Sbjct: 72 --YFVDVPGYGYAKVSKKQREAFGNMIEEYITSRKQLRGVISLVDARHDPSEDDVAMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPT 165 L + +V TK DK+S + Sbjct: 130 LHYYNIPILVVATKSDKISKS 150 >gi|270291412|ref|ZP_06197634.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus acidilactici 7_4] gi|304385125|ref|ZP_07367471.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus acidilactici DSM 20284] gi|270280258|gb|EFA26094.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus acidilactici 7_4] gi|304329319|gb|EFL96539.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus acidilactici DSM 20284] Length = 195 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/139 (43%), Positives = 85/139 (61%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIA GRSNVGKSSL N L+NRK+ ARTS+ PG+TQ LNF+ +D Sbjct: 19 PEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQTLNFYRVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ +K + WG +I +YL+ R L+ V L+D RH D ++ + Sbjct: 70 QLFFVDVPGYGYAKVSQKEREKWGRMIEKYLTSRKELKGVISLVDARHDPTDDDISMYQY 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L + +V TK DK++ Sbjct: 130 LRYYDIPVLVVATKSDKIA 148 >gi|323140765|ref|ZP_08075684.1| ribosome biogenesis GTP-binding protein YsxC [Phascolarctobacterium sp. YIT 12067] gi|322414783|gb|EFY05583.1| ribosome biogenesis GTP-binding protein YsxC [Phascolarctobacterium sp. YIT 12067] Length = 216 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 97/188 (51%), Gaps = 9/188 (4%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--PKDFSNLKNN 82 P+ E AF GRSNVGKSSLIN L R LAR S+ PG+TQ +NF+ K ++ Sbjct: 24 PQPALIEAAFIGRSNVGKSSLINSLCRRNGLARVSSTPGKTQTINFYELEAKRVVEGEDE 83 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + LVD+PGYG+A+ N D W G I +YLS L V LID RH D + F Sbjct: 84 RASFYLVDLPGYGFAKTNHNNKDQWSGFISKYLSGSENLGVVCQLIDIRHKPMDSDMECF 143 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++L + Q+VLTK DKLS A + + R E+I SS + + Sbjct: 144 NWLRSCGLKVQVVLTKSDKLSKNAA---MSQKALFKREMGLKEHEIITYSSSQH----TM 196 Query: 203 RKAILETI 210 R ++E I Sbjct: 197 RGELIERI 204 >gi|312110030|ref|YP_003988346.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y4.1MC1] gi|311215131|gb|ADP73735.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y4.1MC1] Length = 193 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 84/133 (63%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ + ++ V Sbjct: 24 PEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYLINE---------SLYFV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ KK ++WG ++ Y + R LR V L++D RH + D ++ FL Sbjct: 75 DVPGYGFAKVSKKEREAWGKMMGTYFTTREQLRAVVLIVDLRHPPTKDDVMMYEFLKHYE 134 Query: 150 VSYQIVLTKIDKL 162 + IV TK DK+ Sbjct: 135 IPAIIVATKADKV 147 >gi|289207228|ref|YP_003459294.1| ribosome biogenesis GTP-binding protein YsxC [Thioalkalivibrio sp. K90mix] gi|288942859|gb|ADC70558.1| ribosome biogenesis GTP-binding protein YsxC [Thioalkalivibrio sp. K90mix] Length = 203 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 10/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F++GV ++ LP+ EIAF+GRSN GKSS +N L RK LAR PGRTQ +N F + Sbjct: 10 FIKGVAQVEQLPEDDGIEIAFAGRSNAGKSSALNALCGRKALARVGRTPGRTQEINLFAL 69 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 P D A LVD+PGYGYA+ W L+ YL R L + L++D R Sbjct: 70 PPD--------EAWRLVDLPGYGYAKVSAGQRQHWDRLLGDYLQSRECLAGLVLIMDIRR 121 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + ++D+ + ++ + +LTK DKLS A + L T+ + + S Sbjct: 122 PLTELDRQLLEWVPLERCQLHCLLTKADKLSRQAADKQLHATQRELEGLGI-EATLQTFS 180 Query: 193 SVKRKGIEVLRKAILETIN 211 S+K +G++ LR + E + Sbjct: 181 SLKNQGVDDLRGLLTEWLQ 199 >gi|268319666|ref|YP_003293322.1| Probable GTP-binding protein EngB [Lactobacillus johnsonii FI9785] gi|262398041|emb|CAX67055.1| Probable GTP-binding protein EngB [Lactobacillus johnsonii FI9785] Length = 194 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 10/176 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A +GRSNVGKSSLIN +VNR+ LARTS PG+TQ LNF+ + N L Sbjct: 19 PKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFY------KVNNEL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK ++G +I YL R+ L+ + LL+D RH D ++F++ Sbjct: 72 --YLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTADDINMFNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +V TK+DKL A + +K + + + +P SSV + ++ Sbjct: 130 ALYLDIPILVVATKMDKLKKMEASQIKQKISKSL-DLSQENVSFLPFSSVSKLNVD 184 >gi|238790751|ref|ZP_04634511.1| GTP-binding protein engB [Yersinia frederiksenii ATCC 33641] gi|238721149|gb|EEQ12829.1| GTP-binding protein engB [Yersinia frederiksenii ATCC 33641] Length = 207 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLF-- 61 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 62 -------EVVEGVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKIGVDKLREKL 186 >gi|319892718|ref|YP_004149593.1| GTP-binding protein EngB [Staphylococcus pseudintermedius HKU10-03] gi|317162414|gb|ADV05957.1| GTP-binding protein EngB [Staphylococcus pseudintermedius HKU10-03] Length = 198 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A SGRSNVGKS+ IN +V RKN+ARTS PG+TQ LNFF N+ N L Sbjct: 21 PELDLPEVALSGRSNVGKSTFINSMVGRKNMARTSQQPGKTQTLNFF------NIDNQL- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ KK +++G +I Y++ R L+ V L+D RH + D ++ F Sbjct: 74 --IFVDVPGYGYAKVSKKQREAFGKMIETYITTREALKLVIQLVDLRHPPTEDDVLMYDF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + I+ TK DK+ Q+ ++ K + + ++I SS+++K + + Sbjct: 132 LKYYDIPTLIIATKEDKIPKGKVQKHIKIIKEKLE--LESGDQIISYSSIEKKKQDQIWA 189 Query: 205 AI 206 AI Sbjct: 190 AI 191 >gi|238025963|ref|YP_002910194.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia glumae BGR1] gi|237875157|gb|ACR27490.1| Probable GTP-binding protein eng [Burkholderia glumae BGR1] Length = 219 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/181 (39%), Positives = 95/181 (52%), Gaps = 9/181 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQH+N+ FS Sbjct: 20 LPPTVIPEIAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINY-----FSVGPEAE 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL R LR + L++D R + ++DQ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEALLSAYLKTRPQLRGMILMMDSRRPLTELDQRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE----VIPTSSVKRKGI 199 + +LTK DKL+ + L TK + Y A E V S++KR G+ Sbjct: 135 WFAPTGKPIHTLLTKCDKLTRQESVNALRNTKKALAAYRDAGYEGELTVQLFSALKRTGL 194 Query: 200 E 200 + Sbjct: 195 D 195 >gi|153005532|ref|YP_001379857.1| ribosome biogenesis GTP-binding protein YsxC [Anaeromyxobacter sp. Fw109-5] gi|166225939|sp|A7HDS7|ENGB_ANADF RecName: Full=Probable GTP-binding protein EngB gi|152029105|gb|ABS26873.1| GTP-binding protein HSR1-related [Anaeromyxobacter sp. Fw109-5] Length = 216 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/178 (37%), Positives = 90/178 (50%), Gaps = 3/178 (1%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+AF GRSNVGKSS++N L +K LAR S PGRT+ L FF Sbjct: 21 PRGQTPELAFVGRSNVGKSSMLNALTRKKGLARVSATPGRTRALQFFDVAYRPTPAARPR 80 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + D+PGYGYA+ ++ D W +I YL +R LR V L++D RH D D +F Sbjct: 81 HVRFCDLPGYGYAKVSREERDRWAAMIEDYLRDRDVLRAVVLIVDARHAPSDSDVDAAAF 140 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + TK+DKL T L + + A E +P S+V+ G + L Sbjct: 141 LRATGRRVLVAATKMDKLPKTRRGAALRAVEGAL---ALAKGEAVPFSAVEGTGTDAL 195 >gi|319790441|ref|YP_004152074.1| ribosome biogenesis GTP-binding protein YsxC [Thermovibrio ammonificans HB-1] gi|317114943|gb|ADU97433.1| ribosome biogenesis GTP-binding protein YsxC [Thermovibrio ammonificans HB-1] Length = 194 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 12/188 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ E+AF GRSNVGKSSL+N + N LA+ S+ PG+T+ +NF++ D Sbjct: 18 LPQTPYNEVAFVGRSNVGKSSLLNAVANNFKLAKVSSQPGKTRSINFYLVND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYG+A+ P K W LI YL R L+ V+LL+D + G + D + Sbjct: 70 -RFFLVDLPGYGFAKVPLKEQQRWRELIESYLKGRDRLKGVFLLVDSKVGPTEKDLQMKE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +LD + Y +V TK+D+L + + E+ K + +VIP S+ R+G EVL Sbjct: 129 WLDFFGIPYTVVATKVDRLKASQRRNLEERIK---KALGGGDFKVIPFSAKTREGREVLL 185 Query: 204 KAILETIN 211 + I I Sbjct: 186 REIFNYIE 193 >gi|91786673|ref|YP_547625.1| ribosome biogenesis GTP-binding protein YsxC [Polaromonas sp. JS666] gi|119369230|sp|Q12FG5|ENGB_POLSJ RecName: Full=Probable GTP-binding protein EngB gi|91695898|gb|ABE42727.1| GTP-binding protein, HSR1-related protein [Polaromonas sp. JS666] Length = 245 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 101/190 (53%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL PE+ LP+ PEIAF GRSN GKS+ IN L + LA S PGRTQ +N Sbjct: 32 FLTTAPELKHLPRLDVPEIAFVGRSNAGKSTCINTLTQQHRLAFASKTPGRTQSINL--- 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K + L D+PGYGYA PK+ W ++ YL R L+ V LL D R G Sbjct: 89 --FSLGKQGVTDAVLADLPGYGYAAVPKEAKYRWQQVMGNYLQTRDNLKAVVLLCDPRLG 146 Query: 134 VKQIDQ---DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ DV ++ + + ++LTK DKL+ T A + L I +V Sbjct: 147 LTELDEILLDVLRPRVEEGLKFLVLLTKSDKLNKTEAAKALS-----IVRLQAGGGDVKL 201 Query: 191 TSSVKRKGIE 200 SS+KRKG+E Sbjct: 202 FSSLKRKGVE 211 >gi|33151575|ref|NP_872928.1| GTPase EngB [Haemophilus ducreyi 35000HP] gi|71151867|sp|Q7VNY0|ENGB_HAEDU RecName: Full=Probable GTP-binding protein EngB gi|33147795|gb|AAP95317.1| conserved possible cell division GTP-binding protein [Haemophilus ducreyi 35000HP] Length = 210 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 9/157 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N F Sbjct: 15 FLTSAPDIRHLPEDNGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 75 E---------PQCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRDCLAGIVILMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET 170 +K +DQ + + + ++LTK DKLS +T Sbjct: 126 LKDLDQQMIEWAVSAQLPVLLLLTKADKLSQVARNKT 162 >gi|325298117|ref|YP_004258034.1| GTP-binding protein engB [Bacteroides salanitronis DSM 18170] gi|324317670|gb|ADY35561.1| GTP-binding protein engB [Bacteroides salanitronis DSM 18170] Length = 200 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 107/189 (56%), Gaps = 13/189 (6%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 + P+ PE AF GRSNVGKSSLIN+L N LA TS+ PG+T +N F L NN Sbjct: 17 MCPEGNLPEYAFIGRSNVGKSSLINMLTNHSKLAMTSSTPGKTLLINHF-------LINN 69 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + LVD+PGYGYA+ KK ++ +I Y+ ER + C+++LID R ++ID + Sbjct: 70 --SWYLVDLPGYGYAQRGKKVMEQIKNIIQHYVLERMQMTCLFVLIDSRLEPQKIDLEFI 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +L + +V + +V TK DK + Q+ +E+ ++ P TS+ K+ G Sbjct: 128 EWLGENSVPFALVFTKADKQNIVKTQQNVERFLNTLKEQWEELPAYFITSAEKKTG---- 183 Query: 203 RKAILETIN 211 RK +L+ I+ Sbjct: 184 RKEVLDYID 192 >gi|160944173|ref|ZP_02091403.1| hypothetical protein FAEPRAM212_01680 [Faecalibacterium prausnitzii M21/2] gi|158444849|gb|EDP21853.1| hypothetical protein FAEPRAM212_01680 [Faecalibacterium prausnitzii M21/2] gi|295105079|emb|CBL02623.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Faecalibacterium prausnitzii SL3/3] Length = 200 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 103/201 (51%), Gaps = 14/201 (6%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 IF K+ +I G+ LP++ PE++FSGRSNVGKSSLIN L +RKNLAR S+ PG+T Sbjct: 2 IFNKADFIASYGIS--SQLPESDRPELSFSGRSNVGKSSLINKLCSRKNLARVSSTPGKT 59 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 +NF+ D VD+PGYGYA+ + + W LI Y + Sbjct: 60 ATINFYSVDD----------CYFVDLPGYGYAKVSNADRERWDDLINSYFEAPRHHTLLV 109 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 L+DCRH D + +L + Y + LTK DKL + +T E + + R P Sbjct: 110 QLLDCRHAPSADDLQMLRYLHYHRIPYVVALTKADKLKKSQLAKTQEDFENICR--PYGC 167 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 +V+ TS GI L+ + Sbjct: 168 QKVVLTSGENGYGIPELQAVL 188 >gi|163815262|ref|ZP_02206639.1| hypothetical protein COPEUT_01422 [Coprococcus eutactus ATCC 27759] gi|158449457|gb|EDP26452.1| hypothetical protein COPEUT_01422 [Coprococcus eutactus ATCC 27759] Length = 206 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/175 (39%), Positives = 102/175 (58%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +NF+ N Sbjct: 18 LPDNELPEIAFAGKSNVGKSSLINGLLNRKSLARTSAQPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYGYA+ + WG +I YL + L+ V+LLID RH + D ++ Sbjct: 69 KELYFVDLPGYGYAKVSVEIRAKWGKMIENYLHTSAQLKKVFLLIDIRHVPSENDCLMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ I+ TK+DK+ + Q+ L++ K + P +IP S++ ++G Sbjct: 129 WIVNNGYEPVIICTKLDKIKRSQVQKNLKQIKEKLGLVPGTR--MIPFSALTKQG 181 >gi|300774436|ref|ZP_07084299.1| ribosome biogenesis GTP-binding protein YsxC [Chryseobacterium gleum ATCC 35910] gi|300506251|gb|EFK37386.1| ribosome biogenesis GTP-binding protein YsxC [Chryseobacterium gleum ATCC 35910] Length = 217 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 9/185 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P+ PE AF GRSNVGKSSLIN ++N K+LA+TS PG+TQ +N F+ Sbjct: 18 FVKSSGKWQECPEPNIPEYAFIGRSNVGKSSLINAMMNHKDLAKTSQTPGKTQLINHFLV 77 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L D+PGYGYA+ K + LI Y+ R L +++L+D RH Sbjct: 78 NE---------NWYLTDLPGYGYAKVSKVQRKDFEKLITNYILNRRNLVNLFVLVDVRHT 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + + + + + IV TK DKL P + +E K + PE+ TS+ Sbjct: 129 PQKIDLEFIQWCGESGIPFSIVFTKADKLKPNAVIKNVEDYKAELHKTWEDLPELYITSA 188 Query: 194 VKRKG 198 K++G Sbjct: 189 EKKEG 193 >gi|254427895|ref|ZP_05041602.1| GTPase, putative [Alcanivorax sp. DG881] gi|196194064|gb|EDX89023.1| GTPase, putative [Alcanivorax sp. DG881] Length = 203 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/183 (37%), Positives = 100/183 (54%), Gaps = 16/183 (8%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M+ +F +SA + P+ GL E+AF+GRSN GKSS IN L +++ LARTS Sbjct: 9 MLHQALFLQSAQRLDQCPPDEGL-------EVAFAGRSNAGKSSAINRLTSQRTLARTSK 61 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ LNFF + L VD+PGYGYA+ K + W + YLSER Sbjct: 62 TPGRTQLLNFFQLDEERRL---------VDLPGYGYAKVAKSTRNEWQQHLDHYLSERQA 112 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L + L++D RH +K D + + + + I++TK DKL A+ TL + K +++ Sbjct: 113 LVGLVLMMDIRHPLKDFDLLMLEWSAQANMPIHILMTKADKLKFGAAKSTLLQVKKQLKD 172 Query: 181 YPT 183 +P Sbjct: 173 HPA 175 >gi|257453676|ref|ZP_05618963.1| ribosome biogenesis GTP-binding protein YsxC [Enhydrobacter aerosaccus SK60] gi|257448910|gb|EEV23866.1| ribosome biogenesis GTP-binding protein YsxC [Enhydrobacter aerosaccus SK60] Length = 232 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 8/162 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P L P E+AF+GRSN GKSS IN L ++ LAR+S PGRTQ +NFF Sbjct: 28 FMLSAPTFKLCPADTGREVAFAGRSNAGKSSCINALTQQRQLARSSKTPGRTQMINFF-- 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + NL L VD+PGYGYA P+ W + +YL R +L + LL D RH Sbjct: 86 -NMGNLDQRL-----VDLPGYGYAAVPEAMKKEWQSELEKYLISRKSLAGLVLLTDIRHP 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +K D+ + + + ++LTK DKL A+ TL++T+ Sbjct: 140 LKFFDEQMLHWAKDGELEVHVLLTKADKLKYGAAKNTLQQTR 181 >gi|163781961|ref|ZP_02176961.1| hypothetical protein HG1285_03723 [Hydrogenivirga sp. 128-5-R1-1] gi|159883181|gb|EDP76685.1| hypothetical protein HG1285_03723 [Hydrogenivirga sp. 128-5-R1-1] Length = 184 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/156 (40%), Positives = 92/156 (58%), Gaps = 11/156 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PE+ F GRSNVGKSSLIN++ R N+AR S PGRT+ +N+F+ D Sbjct: 13 FPPPDKPEVVFVGRSNVGKSSLINMVTGR-NIARVSKEPGRTRTINYFLLND-------- 63 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVF 142 ++ LVD+PGYG+AR PK+ D W ++ Y R +R V+LLID GV+++D+ + Sbjct: 64 -SVYLVDVPGYGFARVPKEEQDKWKRMMENYFKGRKENIRVVFLLIDAVAGVQKLDRQMI 122 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 +L + + +VLTK DK TL++ K L+ Sbjct: 123 EWLQFVGLPFVVVLTKTDKAKQKELSRTLKQVKELV 158 >gi|21232826|ref|NP_638743.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767103|ref|YP_241865.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. campestris str. 8004] gi|24418370|sp|Q8P5E4|ENGB_XANCP RecName: Full=Probable GTP-binding protein EngB gi|81306913|sp|Q4UYM8|ENGB_XANC8 RecName: Full=Probable GTP-binding protein EngB gi|21114651|gb|AAM42667.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572435|gb|AAY47845.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. 8004] Length = 207 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 9/180 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G E+AF+GRSN GKSS +N L + +LAR S PGRTQ L FF + Sbjct: 20 LPDDGGYEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQQLVFFQIQ--------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 71 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 131 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVSSRFGDSVTVQTYSGESRQGVDELR 190 >gi|260887083|ref|ZP_05898346.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sputigena ATCC 35185] gi|330839140|ref|YP_004413720.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sputigena ATCC 35185] gi|260863145|gb|EEX77645.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sputigena ATCC 35185] gi|329746904|gb|AEC00261.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sputigena ATCC 35185] Length = 207 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/182 (40%), Positives = 98/182 (53%), Gaps = 3/182 (1%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ EI F GRSNVGKSSLIN L KNLAR S PG+TQ +NF+ ++ Sbjct: 23 PEVRRREIVFIGRSNVGKSSLINSLARTKNLARVSGQPGKTQTINFYELGAKIEGEDERC 82 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYAR KKN W I YL + L+ V L+D RH D ++F + Sbjct: 83 DFYLVDLPGYGYARTAKKNRKIWSRFIEAYLLQSEDLQFVCQLMDIRHEPMASDIEMFQW 142 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K + ++ TK DKLS ++++ + R A +++P SSVK +G L Sbjct: 143 LVAKGLPVLVIATKADKLSRNEQKKSIAAMR---RALGVAELDILPYSSVKNEGRSELLD 199 Query: 205 AI 206 AI Sbjct: 200 AI 201 >gi|194097727|ref|YP_002000768.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria gonorrhoeae NCCP11945] gi|239998232|ref|ZP_04718156.1| GTPase EngB [Neisseria gonorrhoeae 35/02] gi|240013416|ref|ZP_04720329.1| GTPase EngB [Neisseria gonorrhoeae DGI18] gi|240015857|ref|ZP_04722397.1| GTPase EngB [Neisseria gonorrhoeae FA6140] gi|240079998|ref|ZP_04724541.1| GTPase EngB [Neisseria gonorrhoeae FA19] gi|240112205|ref|ZP_04726695.1| GTPase EngB [Neisseria gonorrhoeae MS11] gi|240114949|ref|ZP_04729011.1| GTPase EngB [Neisseria gonorrhoeae PID18] gi|240117235|ref|ZP_04731297.1| GTPase EngB [Neisseria gonorrhoeae PID1] gi|240120486|ref|ZP_04733448.1| GTPase EngB [Neisseria gonorrhoeae PID24-1] gi|240122787|ref|ZP_04735743.1| GTPase EngB [Neisseria gonorrhoeae PID332] gi|240124981|ref|ZP_04737867.1| GTPase EngB [Neisseria gonorrhoeae SK-92-679] gi|240127495|ref|ZP_04740156.1| GTPase EngB [Neisseria gonorrhoeae SK-93-1035] gi|254493010|ref|ZP_05106181.1| GTP-binding protein [Neisseria gonorrhoeae 1291] gi|260441235|ref|ZP_05795051.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria gonorrhoeae DGI2] gi|268598264|ref|ZP_06132431.1| GTPase EngB [Neisseria gonorrhoeae MS11] gi|268600615|ref|ZP_06134782.1| GTPase EngB [Neisseria gonorrhoeae PID18] gi|268602926|ref|ZP_06137093.1| GTPase EngB [Neisseria gonorrhoeae PID1] gi|268681399|ref|ZP_06148261.1| GTPase EngB [Neisseria gonorrhoeae PID332] gi|268683566|ref|ZP_06150428.1| GTPase EngB [Neisseria gonorrhoeae SK-92-679] gi|268685868|ref|ZP_06152730.1| GTPase EngB [Neisseria gonorrhoeae SK-93-1035] gi|119369221|sp|Q5FAC6|ENGB_NEIG1 RecName: Full=Probable GTP-binding protein EngB gi|238693222|sp|B4RQ29|ENGB_NEIG2 RecName: Full=Probable GTP-binding protein EngB gi|193933017|gb|ACF28841.1| GTP-binding protein [Neisseria gonorrhoeae NCCP11945] gi|226512050|gb|EEH61395.1| GTP-binding protein [Neisseria gonorrhoeae 1291] gi|268582395|gb|EEZ47071.1| GTPase EngB [Neisseria gonorrhoeae MS11] gi|268584746|gb|EEZ49422.1| GTPase EngB [Neisseria gonorrhoeae PID18] gi|268587057|gb|EEZ51733.1| GTPase EngB [Neisseria gonorrhoeae PID1] gi|268621683|gb|EEZ54083.1| GTPase EngB [Neisseria gonorrhoeae PID332] gi|268623850|gb|EEZ56250.1| GTPase EngB [Neisseria gonorrhoeae SK-92-679] gi|268626152|gb|EEZ58552.1| GTPase EngB [Neisseria gonorrhoeae SK-93-1035] gi|317163518|gb|ADV07059.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria gonorrhoeae TCDC-NG08107] Length = 209 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 102/194 (52%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL R L + L++D RH Sbjct: 66 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y V S Sbjct: 119 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 179 SLKKQGIDEANRTV 192 >gi|238750768|ref|ZP_04612266.1| GTP-binding protein engB [Yersinia rohdei ATCC 43380] gi|238710912|gb|EEQ03132.1| GTP-binding protein engB [Yersinia rohdei ATCC 43380] Length = 207 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLF-- 61 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 62 -------EVVEGVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKIGVDKLREKL 186 >gi|227893378|ref|ZP_04011183.1| GTPase [Lactobacillus ultunensis DSM 16047] gi|227864793|gb|EEJ72214.1| GTPase [Lactobacillus ultunensis DSM 16047] Length = 196 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/188 (39%), Positives = 105/188 (55%), Gaps = 12/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYMVND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ +K +G +I YL R L+ + +LID RH + D ++++ Sbjct: 70 DFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTKDDIAMYNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY-LIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + +V TK+DK+ + + + K L NY H V+ SSV + + L Sbjct: 130 AQYLNIPILVVCTKMDKIKKSQVNKVMSGLKSKLDLNYD--HVTVLTFSSVTKLHVAELG 187 Query: 204 KAILETIN 211 I + I+ Sbjct: 188 DWIEDKIS 195 >gi|319651744|ref|ZP_08005870.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2] gi|317396563|gb|EFV77275.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2] Length = 193 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ PE A +GRSNVGKSS IN ++NR+ LAR S+ PG+TQ LNF++ + Sbjct: 19 PESELPEFALAGRSNVGKSSFINKMLNRRGLARISSKPGKTQTLNFYLINEI-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK ++WG +I YL+ R L+ V L++D RH D ++ F Sbjct: 71 -LHFVDVPGYGYAKVSKKEREAWGKMIETYLTSREQLKAVVLIVDLRHPPSSDDVMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK+ + Q+ ++ TK Sbjct: 130 LKHYDIPCVVIATKADKIPKSKWQKHMKITK 160 >gi|260771615|ref|ZP_05880535.1| GTP-binding protein EngB [Vibrio metschnikovii CIP 69.14] gi|260613392|gb|EEX38591.1| GTP-binding protein EngB [Vibrio metschnikovii CIP 69.14] Length = 218 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/162 (39%), Positives = 94/162 (58%), Gaps = 9/162 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPADDGIEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +RS+L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQQRSSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +K +DQ + + + A+ Q++LTK DKL + L K + Sbjct: 123 MKDLDQQLVLWAVECAIPVQVLLTKADKLKSGARKAQLNKIR 164 >gi|22127680|ref|NP_671103.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis KIM 10] gi|45439885|ref|NP_991424.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis biovar Microtus str. 91001] gi|51594377|ref|YP_068568.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pseudotuberculosis IP 32953] gi|108809514|ref|YP_653430.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis Antiqua] gi|108810412|ref|YP_646179.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis Nepal516] gi|145601125|ref|YP_001165201.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis Pestoides F] gi|150260917|ref|ZP_01917645.1| GTP-binding protein [Yersinia pestis CA88-4125] gi|153948718|ref|YP_001399023.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pseudotuberculosis IP 31758] gi|165926064|ref|ZP_02221896.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. F1991016] gi|165940208|ref|ZP_02228738.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. IP275] gi|166011511|ref|ZP_02232409.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. E1979001] gi|166213756|ref|ZP_02239791.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. B42003004] gi|167402124|ref|ZP_02307601.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418997|ref|ZP_02310750.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167427046|ref|ZP_02318799.1| putative GTP-binding protein EngB [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026401|ref|YP_001722906.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pseudotuberculosis YPIII] gi|186893364|ref|YP_001870476.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pseudotuberculosis PB1/+] gi|218927240|ref|YP_002345115.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis CO92] gi|229836128|ref|ZP_04456296.1| GTP-binding protein [Yersinia pestis Pestoides A] gi|229839867|ref|ZP_04460026.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841949|ref|ZP_04462104.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. India 195] gi|229900594|ref|ZP_04515718.1| GTP-binding protein [Yersinia pestis Nepal516] gi|270488046|ref|ZP_06205120.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis KIM D27] gi|294502128|ref|YP_003566190.1| GTP-binding protein [Yersinia pestis Z176003] gi|24418384|sp|Q8ZJS0|ENGB_YERPE RecName: Full=Probable GTP-binding protein EngB gi|81640846|sp|Q66GG3|ENGB_YERPS RecName: Full=Probable GTP-binding protein EngB gi|119369282|sp|Q1C237|ENGB_YERPA RecName: Full=Probable GTP-binding protein EngB gi|119369283|sp|Q1CN51|ENGB_YERPN RecName: Full=Probable GTP-binding protein EngB gi|166232163|sp|A4TSG6|ENGB_YERPP RecName: Full=Probable GTP-binding protein EngB gi|166920115|sp|A7FCP5|ENGB_YERP3 RecName: Full=Probable GTP-binding protein EngB gi|238688493|sp|B1JR12|ENGB_YERPY RecName: Full=Probable GTP-binding protein EngB gi|238691333|sp|B2JYK5|ENGB_YERPB RecName: Full=Probable GTP-binding protein EngB gi|21960796|gb|AAM87354.1|AE013983_7 hypothetical protein y3809 [Yersinia pestis KIM 10] gi|45434740|gb|AAS60301.1| Predicted GTPases [Yersinia pestis biovar Microtus str. 91001] gi|51587659|emb|CAH19259.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|108774060|gb|ABG16579.1| cell division checkpoint GTPase YihA [Yersinia pestis Nepal516] gi|108781427|gb|ABG15485.1| cell division checkpoint GTPase YihA [Yersinia pestis Antiqua] gi|115345851|emb|CAL18709.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145212821|gb|ABP42228.1| cell division checkpoint GTPase YihA [Yersinia pestis Pestoides F] gi|149290325|gb|EDM40402.1| GTP-binding protein [Yersinia pestis CA88-4125] gi|152960213|gb|ABS47674.1| putative GTP-binding protein EngB [Yersinia pseudotuberculosis IP 31758] gi|165911840|gb|EDR30487.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. IP275] gi|165921924|gb|EDR39101.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. F1991016] gi|165989657|gb|EDR41958.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. E1979001] gi|166205158|gb|EDR49638.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. B42003004] gi|166962991|gb|EDR59012.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048499|gb|EDR59907.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167053973|gb|EDR63804.1| putative GTP-binding protein EngB [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752935|gb|ACA70453.1| GTP-binding protein HSR1-related [Yersinia pseudotuberculosis YPIII] gi|186696390|gb|ACC87019.1| GTP-binding protein HSR1-related [Yersinia pseudotuberculosis PB1/+] gi|229681933|gb|EEO78025.1| GTP-binding protein [Yersinia pestis Nepal516] gi|229690259|gb|EEO82313.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696233|gb|EEO86280.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706576|gb|EEO92582.1| GTP-binding protein [Yersinia pestis Pestoides A] gi|262360206|gb|ACY56927.1| GTP-binding protein [Yersinia pestis D106004] gi|262364153|gb|ACY60710.1| GTP-binding protein [Yersinia pestis D182038] gi|270336550|gb|EFA47327.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis KIM D27] gi|294352587|gb|ADE62928.1| GTP-binding protein [Yersinia pestis Z176003] gi|320017069|gb|ADW00641.1| GTP-binding protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 216 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 73 VD---------GVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 124 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNLVREAIIPF-MGDIQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 183 LKKIGVDKLREKL 195 >gi|13124166|sp|O05132|ENGB_NEIGO RecName: Full=Probable GTP-binding protein EngB Length = 209 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 102/194 (52%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL R L + L++D RH Sbjct: 66 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKELIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y V S Sbjct: 119 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 179 SLKKQGIDEANRTV 192 >gi|59800561|ref|YP_207273.1| GTPase EngB [Neisseria gonorrhoeae FA 1090] gi|268594088|ref|ZP_06128255.1| GTPase EngB [Neisseria gonorrhoeae 35/02] gi|268596140|ref|ZP_06130307.1| GTPase EngB [Neisseria gonorrhoeae FA19] gi|291044574|ref|ZP_06570283.1| GTPase EngB [Neisseria gonorrhoeae DGI2] gi|293397699|ref|ZP_06641905.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria gonorrhoeae F62] gi|59717456|gb|AAW88861.1| putative GTPase [Neisseria gonorrhoeae FA 1090] gi|268547477|gb|EEZ42895.1| GTPase EngB [Neisseria gonorrhoeae 35/02] gi|268549928|gb|EEZ44947.1| GTPase EngB [Neisseria gonorrhoeae FA19] gi|291011468|gb|EFE03464.1| GTPase EngB [Neisseria gonorrhoeae DGI2] gi|291611645|gb|EFF40714.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria gonorrhoeae F62] Length = 211 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 11 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL R L + L++D RH Sbjct: 68 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKQLIGLVLIMDARHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y + V S Sbjct: 121 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 180 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 181 SLKKQGIDEANRTV 194 >gi|294461092|gb|ADE76113.1| unknown [Picea sitchensis] Length = 335 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 101/204 (49%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F Sbjct: 137 FIKSSSRVEECPMNGYPEFALVGRSNVGKSSLVNSLVRRKQLAMTSKKPGKTQLINHF-- 194 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L NN + LVD+PGYGYA AP+ W Y R L CV LLID Sbjct: 195 -----LINN--SWYLVDLPGYGYAIAPRAVRTEWNAFTKDYFLNRKALVCVLLLIDASIP 247 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 K+ID + ++L + + V TK DK +E + + LIR + P Sbjct: 248 AKEIDIECATWLGQNQIPMAFVFTKCDKRKKRKNGNKRPEENIYDFQNLIREFYQETPPW 307 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TSSV +G + L I + NY Sbjct: 308 IMTSSVTNQGRDELLLHIAQLKNY 331 >gi|300173594|ref|YP_003772760.1| GTP-binding protein engB [Leuconostoc gasicomitatum LMG 18811] gi|299887973|emb|CBL91941.1| GTP-binding protein engB [Leuconostoc gasicomitatum LMG 18811] Length = 194 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/141 (44%), Positives = 83/141 (58%), Gaps = 9/141 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA GRSNVGKSSL N L+ RKN ARTS+ PG+TQ LNF+ +D Sbjct: 19 PTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTLNFYNVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + +G +I Y++ R LR V L+D RH D ++ + Sbjct: 70 KLYFVDVPGYGYAKVSKKQREEFGHMIEEYITSRKQLRGVVSLVDARHEPSDDDVSMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPT 165 L + IV TK DK+S + Sbjct: 130 LHYYNIPILIVATKSDKISKS 150 >gi|325847177|ref|ZP_08169976.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480957|gb|EGC84003.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 195 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 9/142 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 PK EIAF+GRSNVGKSS IN + +KNLA+TS+ PG+T+ +NF+ D Sbjct: 18 FPKDNFDEIAFAGRSNVGKSSFINSFLGKKNLAKTSSKPGKTKTINFYKIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ KK + W LI YL +R L+ V+LL+D RH + D++++ Sbjct: 70 -RFRLVDLPGYGYAKVSKKEKEKWNNLIHEYLYKRENLKEVFLLVDIRHAPTKQDKEMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPT 165 ++ + ++ TK DK+ T Sbjct: 129 WIVDSGFTGFVIATKYDKIPKT 150 >gi|145350092|ref|XP_001419457.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579688|gb|ABO97750.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 416 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/151 (43%), Positives = 95/151 (62%), Gaps = 15/151 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF+GRSNVGKSSLIN L ++AR+S+ PG+TQ LNF+ + + LV Sbjct: 107 PEIAFAGRSNVGKSSLINALT-LSSVARSSDVPGKTQSLNFYSMDE---------RIRLV 156 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A + V+SW L+ +YL+ R L+ VYL+ID RHG+K D+++ +FL K Sbjct: 157 DLPGYGFAFAKQHRVESWNELMDKYLTSRPNLKRVYLVIDARHGMKASDREMLAFLSKYG 216 Query: 150 -VSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++L K D ++P L + YLI+ Sbjct: 217 ETQCGVILNKCDYVNPN----ELARRAYLIQ 243 >gi|323464247|gb|ADX76400.1| GTP-binding protein EngB [Staphylococcus pseudintermedius ED99] Length = 198 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 105/182 (57%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNFF N+ N L Sbjct: 21 PELDLPEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFF------NIDNQL- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ KK +++G +I Y++ R L+ V L+D RH + D ++ F Sbjct: 74 --IFVDVPGYGYAKVSKKQREAFGKMIETYITTREALKLVIQLVDLRHPPTEDDVLMYDF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + I+ TK DK+ Q+ ++ K + + ++I SS+++K + + Sbjct: 132 LKYYDIPTLIIATKEDKIPKGKVQKHIKIIKEKLE--LESGDQIISYSSIEKKKQDQIWA 189 Query: 205 AI 206 AI Sbjct: 190 AI 191 >gi|1914833|gb|AAB52537.1| hypothetical GTPase [Neisseria gonorrhoeae] Length = 211 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 11 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL R L + L++D RH Sbjct: 68 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKELIGLVLIMDARHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y + V S Sbjct: 121 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 180 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 181 SLKKQGIDEANRTV 194 >gi|325204762|gb|ADZ00216.1| GTP-binding protein [Neisseria meningitidis M01-240355] Length = 221 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL R L + L++D RH Sbjct: 66 ----ELQN---GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K++D + F I+L+K DKLS +TL + K L++ Y + V S Sbjct: 119 LKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++GI+ + + Sbjct: 179 SLKKQGIDEANRTV 192 >gi|15615611|ref|NP_243915.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus halodurans C-125] gi|13124217|sp|Q9K8F7|ENGB_BACHD RecName: Full=Probable GTP-binding protein EngB gi|10175671|dbj|BAB06768.1| GTP-binding protein [Bacillus halodurans C-125] Length = 194 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + PE+A +GRSNVGKSS IN ++NRK LARTS PG+TQ LNF+ D Sbjct: 19 PNSPLPEVALAGRSNVGKSSFINKMINRKKLARTSQRPGKTQTLNFYNINDI-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+A+ KK+ ++WG +I YL +R L+ V +ID RH + DQ ++ + Sbjct: 71 -LHFVDVPGYGFAKVSKKDREAWGRMIETYLQQRGQLKAVLQIIDIRHDPTKDDQLMYDW 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + I+ TK DK+ Sbjct: 130 LKHFEIPVIIIATKCDKI 147 >gi|198284769|ref|YP_002221090.1| ribosome biogenesis GTP-binding protein YsxC [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665631|ref|YP_002427454.1| ribosome biogenesis GTP-binding protein YsxC [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249290|gb|ACH84883.1| GTP-binding protein HSR1-related [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517844|gb|ACK78430.1| ribosome biogenesis GTP-binding protein YsxC [Acidithiobacillus ferrooxidans ATCC 23270] Length = 228 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 64/160 (40%), Positives = 91/160 (56%), Gaps = 9/160 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V + G LP E+A +GRSNVGKSS +N+L R+ LAR S PGRTQ +N F D Sbjct: 23 VTQAGQLPADDGAEVAIAGRSNVGKSSTLNMLTERRALARVSRTPGRTQAINIF---DLD 79 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 P LVD+PGYGYA+ P+ SWG L+ +YL R +LR + L++D RH Sbjct: 80 ------PGQRLVDLPGYGYAKVPEALRRSWGPLLEQYLRRRGSLRGLILVMDIRHPYTAH 133 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 D D+ +F + + ++L K DKLS A + + + + + Sbjct: 134 DADLIAFAEGCSRPVHVLLNKADKLSRGAAIQEMARLRRI 173 >gi|294669759|ref|ZP_06734825.1| hypothetical protein NEIELOOT_01659 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308325|gb|EFE49568.1| hypothetical protein NEIELOOT_01659 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 210 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP G EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDTGA-EIAFVGRSNAGKSSAINTLCNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +N +VD+PGYGYA P+ W L+ YL R L + L++DCRH Sbjct: 66 -ELAN------GHFMVDLPGYGYAAVPEAVRQHWVTLLGDYLQTRRQLIGLVLIMDCRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K +D + F K I+L+K DKLS +TL K ++ + V S Sbjct: 119 LKPLDIQMLDFFAKTGRPVHILLSKADKLSKNEQIKTLSSVKKALKPFSERQDVSVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++G+E + + Sbjct: 179 SLKKQGMEEVENVV 192 >gi|288817817|ref|YP_003432164.1| putative GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|288787216|dbj|BAI68963.1| putative GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|308751415|gb|ADO44898.1| ribosome biogenesis GTP-binding protein YsxC [Hydrogenobacter thermophilus TK-6] Length = 186 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 17/189 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LPK E+ F GRSNVGKSSLIN+LV + +AR S PGRT+ +N F+ + Sbjct: 13 LPKDHFKEVVFVGRSNVGKSSLINMLVG-EPVARVSKEPGRTRSINAFLLEG-------- 63 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVF 142 + LVD+PGYG+A+ K +SW LI Y ER +RCV++LID + G +D+ + Sbjct: 64 -RIKLVDVPGYGFAKVSKAERESWKRLIESYFRERRQNIRCVFVLIDSKVGPTDLDKLMI 122 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +L + Y++VLTK DK S ++LE K + N EVI TS+ + KG + L Sbjct: 123 EWLRHINIPYKVVLTKTDKASQKELSKSLELLKVVGVN------EVIITSAKEGKGKKEL 176 Query: 203 RKAILETIN 211 ++ILE + Sbjct: 177 YRSILEVVE 185 >gi|227514778|ref|ZP_03944827.1| GTPase [Lactobacillus fermentum ATCC 14931] gi|260663640|ref|ZP_05864529.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus fermentum 28-3-CHN] gi|227086887|gb|EEI22199.1| GTPase [Lactobacillus fermentum ATCC 14931] gi|260551866|gb|EEX24981.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus fermentum 28-3-CHN] Length = 197 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 101/184 (54%), Gaps = 11/184 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE+A GRSNVGKSSL N+L+NRKN A TS+ PG+TQ LNF+ + Sbjct: 19 PATALPELALVGRSNVGKSSLTNVLINRKNYAHTSSQPGKTQTLNFYEVEH--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + +G +I YL+ R LR V L+D RH + D+ +F + Sbjct: 70 KLYFVDVPGYGYAKVSKKQREKFGKMIENYLTTREQLRGVVQLVDGRHAPTEDDRMMFQW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V TK+DK+ P ++ K + ++I S+ +KG E + + Sbjct: 130 LAYYHIPTLVVATKVDKVKPNAHNRIVKVVKEGLG--AAKDQDLILFSATTKKGAESVWQ 187 Query: 205 AILE 208 I E Sbjct: 188 WIEE 191 >gi|42518938|ref|NP_964868.1| GTPase EngB [Lactobacillus johnsonii NCC 533] gi|38606910|gb|AAR25449.1| GTP binding protein [Lactobacillus johnsonii] gi|41583225|gb|AAS08834.1| probable GTP-binding protein EngB [Lactobacillus johnsonii NCC 533] gi|329667518|gb|AEB93466.1| putative GTP-binding protein [Lactobacillus johnsonii DPC 6026] Length = 194 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 10/176 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A +GRSNVGKSSLIN +VNR+ LARTS PG+TQ LNF+ + N L Sbjct: 19 PKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFY------KVNNEL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK ++G +I YL R+ L+ + LL+D RH D ++F++ Sbjct: 72 --YLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTADDINMFNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +V TK+DKL A + +K + + + +P SSV + ++ Sbjct: 130 ALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL-DLSQENVSFLPFSSVSKLNVD 184 >gi|330718623|ref|ZP_08313223.1| GTP-binding protein YsxC [Leuconostoc fallax KCTC 3537] Length = 162 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 63/139 (45%), Positives = 85/139 (61%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA GRSNVGKSSL N L+NRK LARTS PG+TQ LNF+ +D Sbjct: 19 PVTNLPEIALVGRSNVGKSSLTNTLINRKGLARTSAQPGKTQTLNFYNVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ KK +++G +I Y++ R+ LR V L+D RH + D ++ + Sbjct: 70 ALYFVDVPGYGYAKVSKKQREAFGEMIETYITSRAQLRGVVSLVDARHAPSEEDIMMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L V +V TK DK++ Sbjct: 130 LHYYKVPILVVATKADKIA 148 >gi|229543652|ref|ZP_04432712.1| small GTP-binding protein [Bacillus coagulans 36D1] gi|229328072|gb|EEN93747.1| small GTP-binding protein [Bacillus coagulans 36D1] Length = 194 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 107/193 (55%), Gaps = 25/193 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRK LARTS+ PG+TQ LNF+ ++N L Sbjct: 19 PEGHLPEIALAGRSNVGKSSFINKMINRKALARTSSKPGKTQTLNFY------KIENKL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYG+A+ KK + WG +I Y++ R L+ V L++D RH D +++F Sbjct: 72 --YFVDVPGYGFAKVSKKEREKWGRMIETYMTSRKQLKTVVLIVDVRHPPTNDDCLMYNF 129 Query: 145 LDKKAVSYQIVLTKIDKLSP-------TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 L + +V TK DK+ TA+ETL K E+I SS + Sbjct: 130 LKYYKIPCIVVATKADKIPKGKWASHLKTAKETLNLEK---------EDEIILFSSETGE 180 Query: 198 GIEVLRKAILETI 210 G + + +++E I Sbjct: 181 GKDKVWASLMERI 193 >gi|325916357|ref|ZP_08178632.1| cell division checkpoint GTPase YihA [Xanthomonas vesicatoria ATCC 35937] gi|325537405|gb|EGD09126.1| cell division checkpoint GTPase YihA [Xanthomonas vesicatoria ATCC 35937] Length = 207 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 9/180 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G E+AF+GRSN GKSS +N L + +LAR S PGRTQ L FF + Sbjct: 20 LPDDGGYEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQQLVFFQIQ--------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 71 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 131 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESRQGVDELR 190 >gi|227889796|ref|ZP_04007601.1| GTPase [Lactobacillus johnsonii ATCC 33200] gi|227849660|gb|EEJ59746.1| GTPase [Lactobacillus johnsonii ATCC 33200] Length = 194 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 10/176 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A +GRSNVGKSSLIN +VNR+ LARTS PG+TQ LNF+ + N L Sbjct: 19 PKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFY------KVNNEL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK ++G +I YL R+ L+ + LL+D RH D ++F++ Sbjct: 72 --YLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHNPTADDINMFNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +V TK+DKL A + +K + + + +P SSV + ++ Sbjct: 130 ALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL-DLSQENVSFLPFSSVSKLNVD 184 >gi|325928435|ref|ZP_08189626.1| cell division checkpoint GTPase YihA [Xanthomonas perforans 91-118] gi|119369279|sp|Q3BXK1|ENGB_XANC5 RecName: Full=Probable GTP-binding protein EngB gi|325541152|gb|EGD12703.1| cell division checkpoint GTPase YihA [Xanthomonas perforans 91-118] Length = 207 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 94/183 (51%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 20 LPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ--------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 71 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 131 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESRQGVDELR 190 Query: 204 KAI 206 + Sbjct: 191 AIV 193 >gi|91785434|ref|YP_560640.1| GTPase EngB [Burkholderia xenovorans LB400] gi|119368799|sp|Q13TK1|ENGB_BURXL RecName: Full=Probable GTP-binding protein EngB gi|91689388|gb|ABE32588.1| cell division checkpoint GTPase YihA [Burkholderia xenovorans LB400] Length = 217 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/191 (37%), Positives = 98/191 (51%), Gaps = 9/191 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEI F+GRSN GKS+ INIL N+K LA S PGRTQH+N+ Sbjct: 10 FFTTVNHLQDLPATSQPEICFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINY--- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS + P LVD+PGYGYA P W L+ YL RS LR + L++D R Sbjct: 67 --FSVGNADEPTAHLVDLPGYGYAEVPGAAKAHWEALLSAYLQSRSQLRGMILMMDSRRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPT 191 + +D+ + + +LTK DKL+ + L T+ + Y A E+ Sbjct: 125 LTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESVNALRATQKGLAEYRAAGYRGELTAQ 184 Query: 192 --SSVKRKGIE 200 S++KR GI+ Sbjct: 185 LFSALKRIGID 195 >gi|300361499|ref|ZP_07057676.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri JV-V03] gi|300354118|gb|EFJ69989.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri JV-V03] Length = 194 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/149 (44%), Positives = 90/149 (60%), Gaps = 9/149 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A +GRSNVGKSSLIN +VNR+ LARTS PG+TQ LNF+ + N L Sbjct: 19 PKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFY------KVNNEL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK ++G +I YL R+ L+ + LL+D RH D ++F++ Sbjct: 72 --YLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLVLLVDARHDPTADDINMFNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 + +V TK+DKL A + +K Sbjct: 130 ALYLDIPILVVATKMDKLKKMEASQIKQK 158 >gi|116492901|ref|YP_804636.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus pentosaceus ATCC 25745] gi|122265635|sp|Q03F28|ENGB_PEDPA RecName: Full=Probable GTP-binding protein EngB gi|116103051|gb|ABJ68194.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745] Length = 195 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/139 (43%), Positives = 85/139 (61%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIA GRSNVGKSSL N L+NRK+ ARTS+ PG+TQ LNF+ +D Sbjct: 19 PEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQTLNFYRVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ +K + WG +I +Y++ R L+ V L+D RH D ++ + Sbjct: 70 QLFFVDVPGYGYAKVSQKEREKWGKMIEKYITSRKELKGVISLVDARHEPTDDDITMYQY 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L + +V TK DK++ Sbjct: 130 LRYYDIPVLVVATKSDKIA 148 >gi|333030034|ref|ZP_08458095.1| GTP-binding protein engB [Bacteroides coprosuis DSM 18011] gi|332740631|gb|EGJ71113.1| GTP-binding protein engB [Bacteroides coprosuis DSM 18011] Length = 200 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E+ P G PE AF GRSNVGKSSLIN+L NRK LA TS PG+T +N F+ Sbjct: 8 FVISNTEVKKCPTDGLPEYAFIGRSNVGKSSLINMLTNRKGLAMTSAKPGKTMLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ +K +I Y+ ER+ + +++LIDCR Sbjct: 68 NE---------EWYIVDLPGYGYAKRNQKGQQQIKTIIEDYILERTAMTNLFVLIDCRLS 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +QID + +L + + + IV TK DKL+ +E ++ P TSS Sbjct: 119 PQQIDLEFIEWLGENNIPFSIVFTKGDKLTKNKLDSNVEAFLNELKKQWEELPPYFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 KR G + + I E IN Sbjct: 179 EKRMGRDEMLNYI-EQIN 195 >gi|184155097|ref|YP_001843437.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus fermentum IFO 3956] gi|238692961|sp|B2GBC5|ENGB_LACF3 RecName: Full=Probable GTP-binding protein EngB gi|183226441|dbj|BAG26957.1| GTP-binding protein [Lactobacillus fermentum IFO 3956] Length = 197 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 11/184 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE+A GRSNVGKSSL N+L+NRKN A TS PG+TQ LNF+ + Sbjct: 19 PATALPELALVGRSNVGKSSLTNVLINRKNYAHTSGQPGKTQTLNFYEVEH--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + +G +I YL+ R LR V L+D RH + D+ +F + Sbjct: 70 KLYFVDVPGYGYAKVSKKQREKFGKMIENYLTTREQLRGVVQLVDGRHAPTEDDRMMFQW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V TK+DK+ P ++ K + ++I S+ +KG E + + Sbjct: 130 LAYYHIPTLVVATKVDKVKPNAHNRIVKVVKEGLG--AAKDQDLILFSATTKKGAESVWQ 187 Query: 205 AILE 208 I E Sbjct: 188 WIEE 191 >gi|197333942|ref|YP_002154844.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio fischeri MJ11] gi|238690290|sp|B5FFA6|ENGB_VIBFM RecName: Full=Probable GTP-binding protein EngB gi|197315432|gb|ACH64879.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio fischeri MJ11] Length = 215 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 109/195 (55%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 EENCH---------IVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLQGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K IDQ + + + + QI+LTK DKL + + K + ++ EV SS Sbjct: 123 LKDIDQQLVFWAVDQNIPVQILLTKADKLKSGARKAQVLKVREAAVDF-GGEVEVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++ LR + E Sbjct: 182 LKGIGVDKLRAKLDE 196 >gi|83748180|ref|ZP_00945207.1| GTP-binding protein YihA [Ralstonia solanacearum UW551] gi|207721867|ref|YP_002252305.1| gtpase protein [Ralstonia solanacearum MolK2] gi|207744545|ref|YP_002260937.1| gtpase protein [Ralstonia solanacearum IPO1609] gi|83725148|gb|EAP72299.1| GTP-binding protein YihA [Ralstonia solanacearum UW551] gi|206587034|emb|CAQ17618.1| gtpase protein [Ralstonia solanacearum MolK2] gi|206595951|emb|CAQ62878.1| gtpase protein [Ralstonia solanacearum IPO1609] Length = 233 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 104/198 (52%), Gaps = 8/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA +S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L P LVD+PGYGYA P + W L+ YL R L + +++D R Sbjct: 69 MPAKALD---PLGFLVDLPGYGYAEVPGEAKSHWEHLLGDYLQTRPQLAGLIIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPT- 191 ++D + + ++LTK DKL+ A L + ++ +Y T +V T Sbjct: 126 FTELDCQMVEWFLSTGKPIHVLLTKADKLTNNDASRALMSARKVLADYRTQIEGDVSLTV 185 Query: 192 ---SSVKRKGIEVLRKAI 206 SS+KR+GIE ++ + Sbjct: 186 QLFSSLKRRGIEEAQRTV 203 >gi|325922584|ref|ZP_08184338.1| cell division checkpoint GTPase YihA [Xanthomonas gardneri ATCC 19865] gi|325546934|gb|EGD18034.1| cell division checkpoint GTPase YihA [Xanthomonas gardneri ATCC 19865] Length = 207 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 93/180 (51%), Gaps = 9/180 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 20 LPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ--------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 71 PERCLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 131 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESRQGVDELR 190 >gi|256544471|ref|ZP_05471844.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus vaginalis ATCC 51170] gi|256399796|gb|EEU13400.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus vaginalis ATCC 51170] Length = 195 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/142 (40%), Positives = 86/142 (60%), Gaps = 9/142 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P EIAF+GRSNVGKSS IN +++KNLA+TS+ PG+T+ +NF+ D Sbjct: 18 FPNDDFEEIAFAGRSNVGKSSFINSFLDKKNLAKTSSKPGKTKTINFYKIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ K + W LI +YL ER L+ V+LL+D RH + D++++ Sbjct: 70 -KFRLVDLPGYGYAKVSKTEKEKWNNLIHKYLYERENLKEVFLLVDIRHAPTKQDKEMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPT 165 ++ + ++ TK DK+ T Sbjct: 129 WIIDSGFTGFVIATKYDKIPKT 150 >gi|116629800|ref|YP_814972.1| GTPase EngB [Lactobacillus gasseri ATCC 33323] gi|238853431|ref|ZP_04643810.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri 202-4] gi|282851696|ref|ZP_06261061.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri 224-1] gi|311110559|ref|ZP_07711956.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri MV-22] gi|122273262|sp|Q042T8|ENGB_LACGA RecName: Full=Probable GTP-binding protein EngB gi|116095382|gb|ABJ60534.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323] gi|238834003|gb|EEQ26261.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri 202-4] gi|282557664|gb|EFB63261.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri 224-1] gi|311065713|gb|EFQ46053.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri MV-22] Length = 194 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/149 (44%), Positives = 90/149 (60%), Gaps = 9/149 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A +GRSNVGKSSLIN +VNR+ LARTS PG+TQ LNF+ + N L Sbjct: 19 PKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFY------KVNNEL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK ++G +I YL R+ L+ + LL+D RH D ++F++ Sbjct: 72 --YLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHDPTADDINMFNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 + +V TK+DKL A + +K Sbjct: 130 ALYLDIPILVVATKMDKLKKMEASQIKQK 158 >gi|284009009|emb|CBA75939.1| probable GTP-binding protein [Arsenophonus nasoniae] Length = 208 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L +KNLARTS PGRTQ +N F Sbjct: 14 FVTSAPDIHHLPNDHGIEIAFAGRSNAGKSSALNALTQQKNLARTSKTPGRTQLINLFEV 73 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P+ W + YL +R L+ + +L+D RH Sbjct: 74 AE---------GIRLVDLPGYGYAEVPESVKRQWQQALSEYLQKRKCLKGLIILMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + + I+LTK DKL P + L ++ + +V SS Sbjct: 125 LKDMDIQMIEWSVAMNIPILILLTKADKLVPNKRKTQLIAVHNKLKTV-AGNIQVETFSS 183 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ GI+ L+ + E N Sbjct: 184 LKKMGIDKLQLKLDEWFN 201 >gi|308070420|ref|YP_003872025.1| GTP-binding protein engB [Paenibacillus polymyxa E681] gi|305859699|gb|ADM71487.1| Probable GTP-binding protein engB [Paenibacillus polymyxa E681] Length = 203 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/183 (39%), Positives = 99/183 (54%), Gaps = 11/183 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEIA +GRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LN++ D Sbjct: 18 FPVDALPEIALAGRSNVGKSSLINRLINRKNLARTSSTPGKTQQLNYYRIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD PGYGYA+ K + +WG +I YL ER L+ V ++D RH + D ++ Sbjct: 70 -DLYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDLRHPPSKDDIMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + +V TK DK+ T ++ + K + P IP SS + G E L Sbjct: 129 WLRHNGLPVCVVGTKADKIPKTRREKHYKVIKQELGILPGGL--FIPFSSEEGMGKEELW 186 Query: 204 KAI 206 I Sbjct: 187 SVI 189 >gi|284125883|ref|ZP_06386995.1| GTP-binding protein engB [Candidatus Poribacteria sp. WGA-A3] gi|283829177|gb|EFC33603.1| GTP-binding protein engB [Candidatus Poribacteria sp. WGA-A3] Length = 209 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 4/150 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PE+AF GRSNVGKSS IN L+NRK++A+ S PG+TQ LNFF Sbjct: 12 FVKSCMKPAHYPHERLPEVAFVGRSNVGKSSAINSLLNRKSIAKVSTTPGKTQTLNFFRV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +PA+ VD+PGYGYA+A K + WG +I RYLS+R+ L V L+D R G Sbjct: 72 LTSDKV---VPAIFFVDLPGYGYAKAAKSVREQWGPMIERYLSQRAQLCAVVQLVDAR-G 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 ++ D +L +V+TKIDKLS Sbjct: 128 LEAHDVTTLEWLTHLGHRPIVVVTKIDKLS 157 >gi|282877547|ref|ZP_06286364.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccalis ATCC 35310] gi|281300332|gb|EFA92684.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccalis ATCC 35310] Length = 199 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I PK E AF GRSNVGKSSLIN+L N K L++TS+ PG+T +N F+ Sbjct: 8 FLISSPTIDKCPKDNRIEYAFIGRSNVGKSSLINMLCNHKGLSKTSSTPGKTLLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYG+A+ KK +I Y+ +R L +++LID RH Sbjct: 68 ND---------EWYLVDLPGYGFAKRSKKVQADIEKMINTYILQREQLVNLFVLIDVRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID+ +L + + + IV TK DKL A+ + +R+ P TSS Sbjct: 119 QQKIDRAFIDWLGENEIPFTIVFTKADKLGTVKAKANAAQWMEQLRDAWEELPPYFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 KR G E L A ++ IN Sbjct: 179 EKRTGREELL-AYIDEIN 195 >gi|59710682|ref|YP_203458.1| GTPase EngB [Vibrio fischeri ES114] gi|75431909|sp|Q5E8S6|ENGB_VIBF1 RecName: Full=Probable GTP-binding protein EngB gi|59478783|gb|AAW84570.1| cell division GTPase YihA [Vibrio fischeri ES114] Length = 215 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 109/195 (55%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 EENCH---------IVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLQGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K IDQ + + + + QI+LTK DKL + + K + ++ EV SS Sbjct: 123 LKDIDQQLVFWAVDQNIPVQILLTKADKLKSGARKAQVLKVREAAVDF-GGEVEVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++ LR + E Sbjct: 182 LKGIGVDKLRAKLDE 196 >gi|193211890|ref|YP_001997843.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobaculum parvum NCIB 8327] gi|238692673|sp|B3QQY9|ENGB_CHLP8 RecName: Full=Probable GTP-binding protein EngB gi|193085367|gb|ACF10643.1| small GTP-binding protein [Chlorobaculum parvum NCIB 8327] Length = 192 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/152 (44%), Positives = 91/152 (59%), Gaps = 12/152 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G PEI F GRSNVGKSSL+N L RK LA+TS+ PG+T+ +N+F+ + NL Sbjct: 18 LPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFL------INENL 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ +SWG L+ Y+ +R + V LL+D RH D+++ Sbjct: 72 ---YFVDLPGYGYAKVGHGERESWGKLLTDYVVKRDEIALVVLLVDARHPGMGSDREMME 128 Query: 144 FLDKKAVSYQIVLTKIDKL---SPTTAQETLE 172 FLD + IVLTK DKL + A+ T+E Sbjct: 129 FLDYCGRPFGIVLTKWDKLKQAEKSKARRTIE 160 >gi|300714615|ref|YP_003739418.1| GTP-binding protein EngB [Erwinia billingiae Eb661] gi|299060451|emb|CAX57558.1| Probable GTP-binding protein EngB [Erwinia billingiae Eb661] Length = 214 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADTGLEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFQV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 AE---------GYRLVDLPGYGYAEVPEEMKLKWQRALAEYLRDRQCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + + V SS Sbjct: 122 LKDLDQQMILWAVQSGIQVLVLLTKADKLASGARKAQLNAVRETAKGF-IGDVRVEMFSS 180 Query: 194 VKRKGIEVL 202 +K+ G++ L Sbjct: 181 LKKIGVDKL 189 >gi|149908538|ref|ZP_01897200.1| GTP-binding protein [Moritella sp. PE36] gi|149808372|gb|EDM68309.1| GTP-binding protein [Moritella sp. PE36] Length = 226 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P+I L EIAF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 18 FRISAPDISHLTDDSGIEIAFAGRSNAGKSSALNTLTRQKSLARTSKTPGRTQLINVFEI 77 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 78 EE---------GKRLIDLPGYGFAKVPFEVKKKWQKALGEYLQKRQSLKGIVVLMDIRHP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+ + + + +LTK DKL +T+ + K ++ + V P SS Sbjct: 129 LKDLDKQLILWAVDSDIPVMALLTKADKLKQGVRSKTVREVKEAVKEF-GGDVTVAPFSS 187 Query: 194 VKRKGIEVLRKAILE 208 +K GI+VL+ + E Sbjct: 188 LKNTGIDVLKNKLCE 202 >gi|90407617|ref|ZP_01215798.1| GTP-binding protein [Psychromonas sp. CNPT3] gi|90311320|gb|EAS39424.1| GTP-binding protein [Psychromonas sp. CNPT3] Length = 214 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 14/197 (7%) Query: 14 FLRGVPEIGLLPKAGPPE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I L K PPE +AF+GRSN GKSS +N L +K+LARTS PGRTQ +N Sbjct: 13 FLISAPDIKHLDKHLPPETGIEVAFAGRSNAGKSSALNRLTRQKSLARTSKTPGRTQLIN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F ++ L+D+PGYG+A+ P + W + YL RS+L+ + +L+D Sbjct: 73 VFEVEE---------GKRLIDLPGYGFAKVPLEMKLKWQRSLGEYLQNRSSLKGLVVLMD 123 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH K++DQ + + + +LTK DKL + TL K + +N+ +V Sbjct: 124 IRHPFKELDQQLIYWAIDANIPVLALLTKADKLKSGARKATLLKMREEAKNF-EGEVDVQ 182 Query: 190 PTSSVKRKGIEVLRKAI 206 SS+K G+E+L + I Sbjct: 183 LFSSLKGIGVEILEQKI 199 >gi|188990195|ref|YP_001902205.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. campestris str. B100] gi|167731955|emb|CAP50141.1| GTP-binding protein [Xanthomonas campestris pv. campestris] Length = 222 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 9/180 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G E+AF+GRSN GKSS +N L + +LAR S PGRTQ L FF + Sbjct: 35 LPDDGGYEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQQLVFFQIQ--------- 85 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 86 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 145 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 146 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVSSRFGDSVTVQTYSGESRQGVDELR 205 >gi|303232718|ref|ZP_07319403.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium vaginae PB189-T1-4] gi|302481204|gb|EFL44279.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium vaginae PB189-T1-4] Length = 195 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 13/183 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP + E+ F GRSNVGKSSL+N L+ RK LAR S+ PG+T ++NFF N+ Sbjct: 20 LPPSTTAEVVFCGRSNVGKSSLLNKLLGRKALARVSSQPGKTANINFF----------NV 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + +D+PGYG+A+ K W LI Y + + V L+D R +++D + Sbjct: 70 DGVRFIDLPGYGFAKVSKTERSRWADLISGYFDQNRSFNLVISLVDIRIDAQELDMHMID 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 FL A+ + + TK DKL+ AQ + K + P + I TS+ K GI LR Sbjct: 130 FLKDAAIPFVVAFTKADKLTRAKAQANVSKLTKALHIEP---EQAIITSAEKGTGIPQLR 186 Query: 204 KAI 206 + I Sbjct: 187 RRI 189 >gi|295397567|ref|ZP_06807646.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus viridans ATCC 11563] gi|294974191|gb|EFG49939.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus viridans ATCC 11563] Length = 201 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 78/133 (58%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIA +GRSNVGKSS IN ++NRK LARTS+ PG+TQ LN++ +D V Sbjct: 24 PEIALAGRSNVGKSSFINTMINRKKLARTSSKPGKTQQLNYYQIEDL---------FYFV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYAR K WG ++ Y + R L L++D RH + D + F+D Sbjct: 75 DVPGYGYARVSKTEKAKWGEMLETYFATRENLALALLIVDFRHKPTKDDIQMKEFMDYHG 134 Query: 150 VSYQIVLTKIDKL 162 V Y ++ TK DK+ Sbjct: 135 VPYFVIATKTDKI 147 >gi|147677143|ref|YP_001211358.1| ribosome biogenesis GTP-binding protein YsxC [Pelotomaculum thermopropionicum SI] gi|189037182|sp|A5D451|ENGB_PELTS RecName: Full=Probable GTP-binding protein EngB gi|146273240|dbj|BAF58989.1| predicted GTPase [Pelotomaculum thermopropionicum SI] Length = 198 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 13/181 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE+A +GRSNVGKSSL+N LVNRK+LAR S+ PGRT+ +NFF L N L Sbjct: 19 PAGNIPEVALAGRSNVGKSSLLNRLVNRKSLARISSTPGRTRLINFF-------LVNGL- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ + W ++ YL R L+ V LL+D RH +D ++ + Sbjct: 71 -FRLVDLPGYGYAKVSARERQGWRRMVEEYLKTRENLKGVVLLVDSRHPPTVLDVQMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI---PTSSVKRKGIEV 201 L + + + TK DK+S + ++L+ + ++ N P V TS + + +EV Sbjct: 130 LKYQGIPAAVAATKADKISRSKRAQSLKVIREVL-NLTAKEPLVFFSAETSEGREEMLEV 188 Query: 202 L 202 + Sbjct: 189 I 189 >gi|326693799|ref|ZP_08230804.1| GTP-binding protein YsxC [Leuconostoc argentinum KCTC 3773] Length = 196 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/141 (43%), Positives = 84/141 (59%), Gaps = 9/141 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA GRSNVGKSSL N L+ RKN ARTS+ PG+TQ LNF+ +D Sbjct: 19 PTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTLNFYNVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK +++G +I Y++ R LR V L+D RH D ++ + Sbjct: 70 QLYFVDVPGYGYAKVSKKQREAFGQMIEEYITSRKQLRGVISLVDARHDPSADDIAMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPT 165 L + +V TK DK+S + Sbjct: 130 LHYYNIPILVVATKADKISKS 150 >gi|170718325|ref|YP_001783554.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus somnus 2336] gi|168826454|gb|ACA31825.1| GTP-binding protein HSR1-related [Haemophilus somnus 2336] Length = 231 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +LP+ EIAF+GRSN GKS+ +N L +KNLARTS PGRTQ +N F Sbjct: 40 FLMSAPNIQVLPEDSGIEIAFAGRSNAGKSTALNALTQQKNLARTSKTPGRTQLINLFQV 99 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 100 E---------PNCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQKRECLGGLVILMDIRHP 150 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 151 LKDLDQQMIEWAVSADLPVLLLLTKADKLSQSARSKQVKMVRESILPF-QGDVQVEAFSA 209 Query: 194 VKRKGIEVLRKAI 206 + GIE L + + Sbjct: 210 QNKIGIERLSEKL 222 >gi|84625320|ref|YP_452692.1| GTPase EngB [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166710592|ref|ZP_02241799.1| GTPase EngB [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575232|ref|YP_001912161.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas oryzae pv. oryzae PXO99A] gi|119369280|sp|Q2NZ59|ENGB_XANOM RecName: Full=Probable GTP-binding protein EngB gi|119369281|sp|Q5GVY6|ENGB_XANOR RecName: Full=Probable GTP-binding protein EngB gi|238689455|sp|B2SNS8|ENGB_XANOP RecName: Full=Probable GTP-binding protein EngB gi|84369260|dbj|BAE70418.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519684|gb|ACD57629.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 207 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 93/180 (51%), Gaps = 9/180 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 20 LPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ--------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 71 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 131 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGQSRQGVDELR 190 >gi|271502638|ref|YP_003335664.1| ribosome biogenesis GTP-binding protein YsxC [Dickeya dadantii Ech586] gi|270346193|gb|ACZ78958.1| ribosome biogenesis GTP-binding protein YsxC [Dickeya dadantii Ech586] Length = 214 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LAR S PGRTQ +N F Sbjct: 12 FVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARISKTPGRTQLINLFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 72 AE---------GIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRNCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + +V SS Sbjct: 123 LKDLDQQMLEWAVDAGLPVLVLLTKADKLAQGARKSQLNMVREAVLPL-MGDIQVETFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 182 LKKTGVDKLRQKL 194 >gi|194367174|ref|YP_002029784.1| ribosome biogenesis GTP-binding protein YsxC [Stenotrophomonas maltophilia R551-3] gi|194349978|gb|ACF53101.1| GTP-binding protein HSR1-related [Stenotrophomonas maltophilia R551-3] Length = 202 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 9/186 (4%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G LP E+AF+GRSN GKSS +N L + +LAR S PGRTQ L FF Sbjct: 19 MGQLPPDEGAEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQQLVFF--------- 69 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 P LVD+PGYGYA+ P W I RY R+ LR + +++D RH +K D+ Sbjct: 70 QVTPEAHLVDLPGYGYAKVPLDLQAHWQAFIDRYFRTRNALRGLVVVMDIRHPLKDYDRQ 129 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + ++ ++ + +LTK DKLS + +TL+K + + + V S R G++ Sbjct: 130 MLAYAVQRGLPAHALLTKADKLSRSQQMQTLQKVRKELHSSFGDTVSVQVFSGAARTGVD 189 Query: 201 VLRKAI 206 R I Sbjct: 190 EARGII 195 >gi|90415434|ref|ZP_01223368.1| hypothetical protein GB2207_08961 [marine gamma proteobacterium HTCC2207] gi|90332757|gb|EAS47927.1| hypothetical protein GB2207_08961 [marine gamma proteobacterium HTCC2207] Length = 236 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 105/200 (52%), Gaps = 11/200 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I P+ E+AF+GRSN GKSS IN L + LARTS PGRTQ +NFF Sbjct: 37 FLTSAPSIKQCPEDSGCEVAFAGRSNAGKSSAINTLTRIRGLARTSKTPGRTQLINFF-- 94 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D N K LVD+PGYGYA+ P + W + YL R +L + LL+D RH Sbjct: 95 -DLGNDKR------LVDLPGYGYAKVPIEMKREWDRDLAEYLQLRQSLAGLVLLMDIRHP 147 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPT- 191 +++ D + ++ + + I+LTK DKL Q L + +R+ P + T Sbjct: 148 LQEFDLQMLNWAAQAGLPVHILLTKSDKLKRGPGQNALLMVERHLRDMDPGCTLLSVQTF 207 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS+K++G+ L + +N Sbjct: 208 SSLKKQGLPELESVLAHWLN 227 >gi|310643601|ref|YP_003948359.1| gtpase engb [Paenibacillus polymyxa SC2] gi|309248551|gb|ADO58118.1| GTPase EngB [Paenibacillus polymyxa SC2] Length = 203 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/183 (39%), Positives = 99/183 (54%), Gaps = 11/183 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEIA +GRSNVGKSSLIN ++NRKNLARTS+ PG+TQ LN++ D Sbjct: 18 FPVDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQQLNYYRIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD PGYGYA+ K + +WG +I YL ER L+ V ++D RH + D ++ Sbjct: 70 -ELYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDLRHPPSKDDIMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + +V TK DK+ T ++ + K + P IP SS + G E L Sbjct: 129 WLRHNGLPVCVVGTKADKIPKTRREKHYKVIKQELGILPGGL--FIPFSSEEGMGKEELW 186 Query: 204 KAI 206 I Sbjct: 187 SVI 189 >gi|225019948|ref|ZP_03709140.1| hypothetical protein CLOSTMETH_03902 [Clostridium methylpentosum DSM 5476] gi|224947312|gb|EEG28521.1| hypothetical protein CLOSTMETH_03902 [Clostridium methylpentosum DSM 5476] Length = 200 Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 106/203 (52%), Gaps = 15/203 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ ++ G+ + +P + EIAF+GRSNVGKSS+IN L NRK LAR S+ PG+T Sbjct: 4 FNKAEFVTSYGL--LSQIPPSERLEIAFAGRSNVGKSSMINKLFNRKGLARVSSVPGKTA 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ D + VD+PGYGYA+ K W LI Y + + V Sbjct: 62 TINFYQTGD---------EVYFVDLPGYGYAKVAKSEKQRWSELIEGYFHDDRDIALVVQ 112 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID RH ++D + FL + + + IVLTK DKLS LE L P A Sbjct: 113 LIDMRHPPTKLDLQMIDFLIESEIPFLIVLTKADKLSKNQQAVRLEA---LQTELPYADQ 169 Query: 187 -EVIPTSSVKRKGIEVLRKAILE 208 ++P SS G+E LR+ + E Sbjct: 170 ITMLPFSSETGMGVEELREILNE 192 >gi|58337155|ref|YP_193740.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus acidophilus NCFM] gi|227903731|ref|ZP_04021536.1| GTPase [Lactobacillus acidophilus ATCC 4796] gi|81311481|sp|Q5FKR5|ENGB_LACAC RecName: Full=Probable GTP-binding protein EngB gi|58254472|gb|AAV42709.1| GTP-binding protein ENGB family [Lactobacillus acidophilus NCFM] gi|227868618|gb|EEJ76039.1| GTPase [Lactobacillus acidophilus ATCC 4796] Length = 196 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 71/173 (41%), Positives = 97/173 (56%), Gaps = 12/173 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LNF++ D Sbjct: 19 PKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYLVND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ +K +G +I YL R L+ + +LID RH + D ++ + Sbjct: 70 DFYLVDVPGYGYAKVSQKRRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTKDDISMYEY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPTSSVKR 196 + +V TK+DK+ + + K L NY H V+ SSV + Sbjct: 130 AQYLNIPILVVCTKMDKIKKNQTNKVMTGLRKKLDLNYD--HVTVLTFSSVTK 180 >gi|190149362|ref|YP_001967887.1| GTP-binding protein EngB [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189914493|gb|ACE60745.1| putative GTP-binding protein EngB [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 180 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 98/172 (56%), Gaps = 10/172 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F + P LVD Sbjct: 2 EIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEVE---------PNCKLVD 52 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA P++ W + YL +R LR V +L+D RH +K +DQ + + + Sbjct: 53 LPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHPLKDLDQQMIEWAVSAQL 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++LTK DKLS + +T++ + I + +V S++ + GI+ L Sbjct: 113 PVLLLLTKADKLSQSARSKTVKMVREAILPF-QGDIQVEAYSALNKVGIDKL 163 >gi|332529500|ref|ZP_08405458.1| GTP-binding protein YsxC [Hylemonella gracilis ATCC 19624] gi|332041020|gb|EGI77388.1| GTP-binding protein YsxC [Hylemonella gracilis ATCC 19624] Length = 221 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/190 (37%), Positives = 100/190 (52%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 9 FLTTSPDLLHLPPLDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINL--- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K + L D+PGYGYA P ++ W ++ YL R L + LL D RHG Sbjct: 66 --FSLGKQGVTDAMLADLPGYGYAAVPMQDKLRWQQVMANYLVTRENLAAIVLLCDPRHG 123 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ + + ++ + + IVLTK DKL+ + A + L I EV Sbjct: 124 LTELDEVLLEVIRPRVEQGLKFLIVLTKADKLTRSEAAKALS-----IAKLNAGGGEVRL 178 Query: 191 TSSVKRKGIE 200 S+ KR G++ Sbjct: 179 FSATKRIGVD 188 >gi|304311551|ref|YP_003811149.1| GTP-binding protein [gamma proteobacterium HdN1] gi|301797284|emb|CBL45504.1| GTP-binding protein [gamma proteobacterium HdN1] Length = 236 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 91/178 (51%), Gaps = 9/178 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P E+AF+GRSN GKSS IN + + LARTS PGRTQ LNFF Sbjct: 43 FLTSAAKLSQCPPDEGREVAFAGRSNAGKSSAINRITQQSKLARTSKTPGRTQLLNFFSV 102 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA P+ W + YL R +L V L++D RH Sbjct: 103 DDHKRL---------VDLPGYGYAEVPEALKVEWQRHLTEYLENRVSLVGVILIMDVRHP 153 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 +K DQ + + I+LTK DKLS Q++L + K I++Y ++ T Sbjct: 154 LKPFDQMMLDWARAYQFPLHILLTKADKLSRNAGQKSLAEVKRAIKSYSDVSVQLFST 211 >gi|291530133|emb|CBK95718.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Eubacterium siraeum 70/3] Length = 206 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 13/162 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +PK+ EIAFSGRSNVGKSSLIN ++NRK+LAR S+ PG+T +NF+ ++ Sbjct: 18 IPKSEKAEIAFSGRSNVGKSSLINKILNRKSLARVSSMPGKTVTINFY----------SV 67 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + D+PGYGYA+ K W GL+ YL++ L V+ L+D RH D + + Sbjct: 68 DNIYFADLPGYGYAKVSKSEKQRWAGLVEGYLADDRNLTLVFQLVDFRHSPTADDVMMIN 127 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 FL + + +VLTK DKLS +E + + L+ P A Sbjct: 128 FLIDNGIPFVVVLTKADKLSK---KERAARRESLMNEIPCAE 166 >gi|223039886|ref|ZP_03610170.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter rectus RM3267] gi|222878895|gb|EEF13992.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter rectus RM3267] Length = 208 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 110/200 (55%), Gaps = 27/200 (13%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I L P A E+AF GRSNVGKSSLIN LVN+K LA++S+ PG+T+ +NFF Sbjct: 9 FLISAPDISLAPPANSSEVAFLGRSNVGKSSLINALVNQKGLAKSSSTPGKTRLINFFEV 68 Query: 74 KDFSNLKNNLPA-------MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 + +KN + VD+PG+GYA+ K W + YL R+ ++ Sbjct: 69 EYARGIKNEQDEVSEERANLTFVDLPGFGYAKVAKSMHAQWRKNLDEYLKFRANIKLFVH 128 Query: 127 LIDCRHGVKQIDQDVFSFL------DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LID R QID+DV +L D+K +++ LTK DKL+ + + +++ Sbjct: 129 LIDSRQFDMQIDRDVNDYLQSFLRPDQKILNF---LTKSDKLNQS-------RKSAVLKV 178 Query: 181 YPTAHPEVIPTSSVKRKGIE 200 YP AH S++K+ GIE Sbjct: 179 YPGAH----FVSALKKTGIE 194 >gi|289668455|ref|ZP_06489530.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 188 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 95/183 (51%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P G E+AF+GRSN GKSS +N L + +LAR S PGRTQ L FF + Sbjct: 1 MPNDGGFEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQQLVFFQIQ--------- 51 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 52 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 111 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 112 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESRQGVDELR 171 Query: 204 KAI 206 + Sbjct: 172 GIV 174 >gi|302391294|ref|YP_003827114.1| ribosome biogenesis GTP-binding protein YsxC [Acetohalobium arabaticum DSM 5501] gi|302203371|gb|ADL12049.1| ribosome biogenesis GTP-binding protein YsxC [Acetohalobium arabaticum DSM 5501] Length = 194 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 63/139 (45%), Positives = 85/139 (61%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSSLIN +VNR A TS+ PG+TQ LNF+ N+ N Sbjct: 19 PRHNLPEIALAGRSNVGKSSLINQMVNRNRFAHTSSKPGKTQTLNFY------NIDN--- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYG+AR P + D W +I YL RS L V L++D RH D ++ + Sbjct: 70 IFSFVDLPGYGFARVPDEVKDKWSEMIEEYLFHRSNLAGVILIVDARHEPTDDDLMMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L + + + +V TK+DKLS Sbjct: 130 LLEMQLPHLVVGTKVDKLS 148 >gi|329766944|ref|ZP_08258472.1| ribosome biogenesis GTP-binding protein YsxC [Gemella haemolysans M341] gi|328837669|gb|EGF87294.1| ribosome biogenesis GTP-binding protein YsxC [Gemella haemolysans M341] Length = 198 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 73/177 (41%), Positives = 99/177 (55%), Gaps = 13/177 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A GRSNVGKSS IN ++ RKN AR S+ PG+T+ LNFF D N Sbjct: 22 PEHDKPEVAMCGRSNVGKSSFINTILERKNYARVSSKPGKTRTLNFF---DVDN------ 72 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K + +IV Y + L V LID RH Q D ++ F Sbjct: 73 KLVLVDVPGYGYAKLSKPEKEKLYDMIVEYFTNSENLGFVLHLIDSRHKPSQDDIEMNEF 132 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKGIE 200 L+ + + IV+TKIDK+S E ++ T + R T + +IP SSV + G E Sbjct: 133 LNYYEIPFVIVMTKIDKIS---KNELVKNTGIIKRELDLTNNMAIIPFSSVTKIGKE 186 >gi|262172870|ref|ZP_06040548.1| GTP-binding protein EngB [Vibrio mimicus MB-451] gi|261893946|gb|EEY39932.1| GTP-binding protein EngB [Vibrio mimicus MB-451] Length = 219 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 106/190 (55%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 AEGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + +N+ +V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKNF-GGDVQVDAFSS 181 Query: 194 VKRKGIEVLR 203 + G++ LR Sbjct: 182 LSGIGVDTLR 191 >gi|319791903|ref|YP_004153543.1| ribosome biogenesis GTP-binding protein ysxc [Variovorax paradoxus EPS] gi|315594366|gb|ADU35432.1| ribosome biogenesis GTP-binding protein YsxC [Variovorax paradoxus EPS] Length = 261 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 102/189 (53%), Gaps = 13/189 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP PEIAF GRSN GKS+ IN L + LA S PGRTQH+N Sbjct: 48 FLTSAPQLEHLPPVDLPEIAFVGRSNAGKSTAINTLTQQTRLAFASKTPGRTQHINL--- 104 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F K + L D+PGYGYA PK+ W ++ YL R +LR V L+ D RHG Sbjct: 105 --FGIGKQKVDDAVLADLPGYGYAAVPKEAKLRWQRVMGNYLITRESLRGVVLMCDPRHG 162 Query: 134 VKQIDQ---DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ DV ++ + + I+LTK DKL+ + A + L T+ EV Sbjct: 163 LTELDEILLDVIRPRVQQGLKFLILLTKSDKLTRSEAAKVLSITR-----LQAGGGEVKL 217 Query: 191 TSSVKRKGI 199 S++K++G+ Sbjct: 218 FSALKKQGV 226 >gi|119368785|sp|Q6F7Q4|ENGB_ACIAD RecName: Full=Probable GTP-binding protein EngB Length = 237 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 105/195 (53%), Gaps = 9/195 (4%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 3 APKLSLCVEDTGYEIAFAGRSNAGKSSAINSLTNQKQLARASKKPGRTQMINFF------ 56 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH ++ Sbjct: 57 SLGN--PDQRLVDLPGYGYAAVPEDMKRIWQKELENYLIHRQSLQGLVLLMDIRHPLQHF 114 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + + + + I+LTK DKL+ A + L K ++ + + SS+ ++ Sbjct: 115 DTMMLEWAHSRKLFVHILLTKADKLNRGPANQVLLDVKQTLKKMKLSFS-IQLFSSLNKQ 173 Query: 198 GIEVLRKAILETINY 212 G+E L + +NY Sbjct: 174 GLEELASVMAGRLNY 188 >gi|323499674|ref|ZP_08104642.1| putative GTP-binding protein EngB [Vibrio sinaloensis DSM 21326] gi|323315275|gb|EGA68318.1| putative GTP-binding protein EngB [Vibrio sinaloensis DSM 21326] Length = 221 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 106/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 123 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGF-GGDVSVAAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++VLR + E Sbjct: 182 LKGIGVDVLRSKLDE 196 >gi|113460478|ref|YP_718540.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus somnus 129PT] gi|112822521|gb|ABI24610.1| cell division checkpoint GTPase YihA [Haemophilus somnus 129PT] Length = 231 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +LP+ EIAF+GRSN GKS+ +N L +KNLARTS PGRTQ +N F Sbjct: 40 FLMSAPNIKVLPEDSGIEIAFAGRSNAGKSTALNALTQQKNLARTSKIPGRTQLINLFQV 99 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 100 E---------PNCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQKRECLGGLVILMDIRHP 150 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 151 LKDLDQQMIEWAVSADLPVLLLLTKADKLSQSARSKQVKMVREAILPF-QGDVQVEAFSA 209 Query: 194 VKRKGIEVLRKAI 206 + GIE L + + Sbjct: 210 QNKIGIERLSEKL 222 >gi|331701127|ref|YP_004398086.1| GTP-binding protein engB [Lactobacillus buchneri NRRL B-30929] gi|329128470|gb|AEB73023.1| GTP-binding protein engB [Lactobacillus buchneri NRRL B-30929] Length = 195 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 11/151 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA GRSNVGKSSL N+L+NR ARTS+ PG+TQ LNF+ +D Sbjct: 19 PNTQFPEIALVGRSNVGKSSLTNVLINRNKFARTSSQPGKTQTLNFYNIED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+A K + + WG +I YL++R LR V L+D RH D + ++ Sbjct: 70 KLYFVDVPGYGYAKASKASREKWGRMIETYLTKREQLRGVITLVDGRHAPTDDDVSMHNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPT--TAQETLEK 173 L + V TK+DK+S QE+L K Sbjct: 130 LKYYNIPMLTVATKMDKISSGKWNKQESLIK 160 >gi|119369201|sp|Q0I1G1|ENGB_HAES1 RecName: Full=Probable GTP-binding protein EngB Length = 204 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +LP+ EIAF+GRSN GKS+ +N L +KNLARTS PGRTQ +N F Sbjct: 13 FLMSAPNIKVLPEDSGIEIAFAGRSNAGKSTALNALTQQKNLARTSKIPGRTQLINLFQV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQKRECLGGLVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 124 LKDLDQQMIEWAVSADLPVLLLLTKADKLSQSARSKQVKMVREAILPF-QGDVQVEAFSA 182 Query: 194 VKRKGIEVLRKAI 206 + GIE L + + Sbjct: 183 QNKIGIERLSEKL 195 >gi|78046337|ref|YP_362512.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034767|emb|CAJ22412.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 221 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 94/183 (51%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 34 LPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ--------- 84 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 85 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 144 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 145 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESRQGVDELR 204 Query: 204 KAI 206 + Sbjct: 205 AIV 207 >gi|261250088|ref|ZP_05942665.1| GTP-binding protein EngB [Vibrio orientalis CIP 102891] gi|260939592|gb|EEX95577.1| GTP-binding protein EngB [Vibrio orientalis CIP 102891] Length = 221 Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 106/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRALPADEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A+ P + W + YL +R+ L+ + +L+D RH Sbjct: 72 TDGCH---------IVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRTCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 123 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGF-GGDVSVAAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++VLR + E Sbjct: 182 LKGLGVDVLRNKLDE 196 >gi|238759873|ref|ZP_04621029.1| GTP-binding protein engB [Yersinia aldovae ATCC 35236] gi|238701934|gb|EEP94495.1| GTP-binding protein engB [Yersinia aldovae ATCC 35236] Length = 207 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VD---------GIRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 K+ G++ LR+ + Sbjct: 174 PKKIGVDKLREKL 186 >gi|254362533|ref|ZP_04978636.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] gi|153094133|gb|EDN75032.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] Length = 203 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N F Sbjct: 10 FLTSAPDIRHLPEDTGVEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K +N K LVD+PGYGYA P++ W + YL +R L V +L+D RH Sbjct: 68 KVETNCK-------LVDLPGYGYAAVPEQMKIQWQKALGEYLQKRECLGGVVILMDIRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 121 LKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKMVREAILPF-QGDIQVEAYSA 179 Query: 194 VKRKGIEVL 202 + + GI+ L Sbjct: 180 LNKIGIDKL 188 >gi|325269826|ref|ZP_08136436.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella multiformis DSM 16608] gi|324987799|gb|EGC19772.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella multiformis DSM 16608] Length = 199 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 12/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P I P E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTISSPSIARCPSDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K + +I +Y+ +R L V++LID RH Sbjct: 68 NN---------EWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPTS 192 ++ID++ +L + + + I+ TK DKLSP+ A+ L K L + P I ++ Sbjct: 119 QQKIDREFVDWLGESNIPFSIIFTKADKLSPSKAKSNALLWMKKLEDRWEALPPYFITSA 178 Query: 193 SVKRKGIEVLRKAILETIN 211 K EVL +E IN Sbjct: 179 ETKAGKEEVLD--YIEQIN 195 >gi|152976884|ref|YP_001376401.1| GTPase EngB [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189037170|sp|A7GTE8|ENGB_BACCN RecName: Full=Probable GTP-binding protein EngB gi|152025636|gb|ABS23406.1| small GTP-binding protein [Bacillus cytotoxicus NVH 391-98] Length = 198 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/182 (40%), Positives = 95/182 (52%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ D Sbjct: 19 PGGDLPEIALAGRSNVGKSSFINTILNRKKLVRISSKPGKTQTLNFFIINDM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ K +WG +I Y + R L L+ID RH + D ++ F Sbjct: 71 -MHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDATVLVIDLRHPPTKDDVMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + I+ TK DK+ Q+ L+ K + A EV+ SS G E K Sbjct: 130 LKHYEIPTIIIATKADKIPKGKWQKHLKVVKETLD--VEAGDEVVLFSSETGLGKEEAWK 187 Query: 205 AI 206 AI Sbjct: 188 AI 189 >gi|171057084|ref|YP_001789433.1| ribosome biogenesis GTP-binding protein YsxC [Leptothrix cholodnii SP-6] gi|170774529|gb|ACB32668.1| GTP-binding protein HSR1-related [Leptothrix cholodnii SP-6] Length = 265 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 100/195 (51%), Gaps = 15/195 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV- 72 FL + LP PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N F Sbjct: 28 FLTTASRLDQLPAHDLPEIAFVGRSNAGKSTAINTLAQQRQLAFASKKPGRTQHINLFEL 87 Query: 73 -PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 PKD P+ D+PGYGYA + W ++ YL R L V +ID R Sbjct: 88 GPKD-------APSALWADLPGYGYAAVERAAKLRWQAVMADYLKMRRNLAGVVQMIDSR 140 Query: 132 HGVKQIDQDVFSFLDKKAVSYQ----IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 HG +D+ + F+ + V+ + ++LTK DKL+ A L + + + T + Sbjct: 141 HGFTALDRQLLEFVGPRVVTGEVKLLVLLTKADKLNRKEASAALRSAQDFLADLSTDQSD 200 Query: 188 VIPT--SSVKRKGIE 200 + T S++KR+G+E Sbjct: 201 LSVTLFSALKRQGVE 215 >gi|17547707|ref|NP_521109.1| GTPase EngB [Ralstonia solanacearum GMI1000] gi|24418380|sp|Q8XV43|ENGB_RALSO RecName: Full=Probable GTP-binding protein EngB gi|17430012|emb|CAD16697.1| probable gtpase protein [Ralstonia solanacearum GMI1000] Length = 234 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA +S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L P LVD+PGYGYA+ P + W L+ Y+ RS L + +++D R Sbjct: 69 MPAKALD---PLGFLVDLPGYGYAQVPGEAKSHWEHLLGDYIQTRSQLAGLVIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPT- 191 +D + + ++LTK DKL+ A L + ++ Y EV T Sbjct: 126 FTDLDCQMVEWFLPTGKPIHVLLTKADKLTNNDASRALMSARKVLAGYQAQIEGEVSLTV 185 Query: 192 ---SSVKRKGIEVLRKAI 206 SS+KR+GIE ++ + Sbjct: 186 QLFSSLKRRGIEEAQRTV 203 >gi|317494611|ref|ZP_07953024.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917541|gb|EFV38887.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacteriaceae bacterium 9_2_54FAA] Length = 216 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRALPADIGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 73 TD---------GVRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 124 LKDLDQQMIQWAVDVNLPVMLLLTKADKLASGARKAQLNMVREAVLPF-MGDIQVETFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ L + + Sbjct: 183 LKKFGVDKLSEKL 195 >gi|288925742|ref|ZP_06419673.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae D17] gi|315608306|ref|ZP_07883295.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae ATCC 33574] gi|288337397|gb|EFC75752.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae D17] gi|315249936|gb|EFU29936.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae ATCC 33574] Length = 202 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 104/195 (53%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P + + PK E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FIISAPRVSMCPKDDRLEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NN LVD+PGYG+A+ K + +I Y+ +R L V++LID R Sbjct: 68 -------NN--EWYLVDLPGYGFAKRSKTVLKQLEQMIAGYILQRKQLANVFVLIDIRLD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + V + IV TK DKL P A+ + +++ P TS+ Sbjct: 119 PQKIDREFIDWLGESNVPFAIVFTKADKLGPVKAKANAARWMTSLQDRWEELPPYFITSA 178 Query: 194 VKRKGIEVLRKAILE 208 KR G E L I E Sbjct: 179 EKRTGREELLDYIDE 193 >gi|217969951|ref|YP_002355185.1| ribosome biogenesis GTP-binding protein YsxC [Thauera sp. MZ1T] gi|217507278|gb|ACK54289.1| GTP-binding protein HSR1-related [Thauera sp. MZ1T] Length = 219 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/187 (40%), Positives = 101/187 (54%), Gaps = 15/187 (8%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 GL P +G EIAF+GRSN GKSS IN L LA S PGRTQ +NFF L N Sbjct: 18 GLPPPSGA-EIAFAGRSNAGKSSAINTLAGHVRLAYVSKTPGRTQLINFF------RLNN 70 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA P+K W GLI YL R +L + L++D RH + +D+++ Sbjct: 71 G---ALLVDLPGYGYAAVPEKIRRQWSGLIETYLRTRESLIGLVLIMDSRHPLTPLDRNM 127 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT--SSVKRKGI 199 + ++LTK DKLS A TL++ + R P+V SS+K+ G+ Sbjct: 128 IDWFAPSGRPMHVLLTKSDKLSRGAAAATLQEVR---RALEPLGPQVTVQLFSSLKKSGV 184 Query: 200 EVLRKAI 206 E + + I Sbjct: 185 EEVERVI 191 >gi|167751930|ref|ZP_02424057.1| hypothetical protein ALIPUT_00172 [Alistipes putredinis DSM 17216] gi|167660171|gb|EDS04301.1| hypothetical protein ALIPUT_00172 [Alistipes putredinis DSM 17216] Length = 198 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 13/188 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LPK PE AF GRSNVGKSSL+N+L R LA+ S PG+T+ +N F D Sbjct: 18 LPKDSLPEFAFIGRSNVGKSSLVNMLTGRSGLAKVSGTPGKTRLINHFRIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGYAR K D + +I Y+ + +++L+D R ++ID Sbjct: 70 -SWYLVDLPGYGYARTSKTQRDEFAKIITDYVLRCERMHFLFVLVDSRLEPQKIDLRFIE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L ++ + + IV TK DKLS ++E+ K ++ P + +SS KR G R Sbjct: 129 MLGREGIPFGIVFTKTDKLSAAQLARSVERYKQVLGEQWEGLPPMFRSSSEKRTG----R 184 Query: 204 KAILETIN 211 + IL+ I Sbjct: 185 EEILDFIG 192 >gi|329924530|ref|ZP_08279592.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. HGF5] gi|328940609|gb|EGG36929.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. HGF5] Length = 214 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 11/168 (6%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 TK+ ++ VP P+ PEIA +GRSNVGKSSLIN +++RKNLARTS PG+TQ Sbjct: 4 TKAEFVISAVVP--AQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSATPGKTQQ 61 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LN++ D + LVD PGYGYA+ K ++G +I RYL R L+ V L+ Sbjct: 62 LNYYRVND---------DLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLSREELKLVLLI 112 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +D RH + D ++ +L +V TK DK+ T Q+ ++ K Sbjct: 113 VDMRHPPSKDDISMYEWLQHYNRPVCVVATKADKIPKTRRQKHVKIVK 160 >gi|261856751|ref|YP_003264034.1| ribosome biogenesis GTP-binding protein YsxC [Halothiobacillus neapolitanus c2] gi|261837220|gb|ACX96987.1| ribosome biogenesis GTP-binding protein YsxC [Halothiobacillus neapolitanus c2] Length = 227 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 13/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P L E+AF+GRSN GKS+++N LV +K+LARTS PGRTQ +N F Sbjct: 9 FIKSAPSPKELTADFGAEVAFAGRSNAGKSTVLNALVGQKSLARTSRTPGRTQLINLFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D S LVD+PGYGYA+ P+ WG + Y +ER +L V +++D RH Sbjct: 69 SDESR--------RLVDLPGYGYAKVPEAMRRRWGEALAAYFAERRSLAGVVVIMDIRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K+ D+ + + + + +L K DKLS Q + KT + ++ + A +P S Sbjct: 121 LKETDRQMIEYAQDRQLPVLCLLNKADKLS----QNEISKTVFALKKEASLAAVHWLPFS 176 Query: 193 SVKRKGIEVLRKAILETIN 211 ++ G+ R + E +N Sbjct: 177 GLRGSGVPQARTILDEWLN 195 >gi|296134050|ref|YP_003641297.1| ribosome biogenesis GTP-binding protein YsxC [Thermincola sp. JR] gi|296032628|gb|ADG83396.1| ribosome biogenesis GTP-binding protein YsxC [Thermincola potens JR] Length = 205 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 65/150 (43%), Positives = 85/150 (56%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P P G PEIAF+GRSNVGKSSLIN L NRK LA+TS+ PG+TQ LNF++ Sbjct: 8 FIISAPGPKQYPVEGYPEIAFAGRSNVGKSSLINTLTNRKGLAKTSSRPGKTQLLNFYLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ VD+PGYG+AR K+ WG +I YL R L V LID RH Sbjct: 68 NK---------SLYFVDLPGYGFARVSKETKSYWGKMIENYLKNREELVAVVQLIDIRHA 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 + D + +L + +VL K DK++ Sbjct: 119 PSRDDITMHQWLKHYRIPTVLVLNKADKIT 148 >gi|261405364|ref|YP_003241605.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. Y412MC10] gi|261281827|gb|ACX63798.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. Y412MC10] Length = 214 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 11/168 (6%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 TK+ ++ VP P+ PEIA +GRSNVGKSSLIN +++RKNLARTS PG+TQ Sbjct: 4 TKAEFVISAVVP--AQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSATPGKTQQ 61 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LN++ D + LVD PGYGYA+ K ++G +I RYL R L+ V L+ Sbjct: 62 LNYYRVND---------DLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLSREELKLVLLI 112 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +D RH + D ++ +L +V TK DK+ T Q+ ++ K Sbjct: 113 VDMRHPPSKDDISMYEWLQHYNRPVCVVATKADKIPKTRRQKHVKIVK 160 >gi|239623660|ref|ZP_04666691.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521691|gb|EEQ61557.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 193 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 105/177 (59%), Gaps = 15/177 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P+ PE AFSG+SNVGKSSLIN L+NRK+ ARTS+ PG+TQ +NF+ N Sbjct: 18 MPENILPEFAFSGKSNVGKSSLINALMNRKSYARTSSQPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A+ VD+PGYGYA+ + + WG +I RYL + L+ V+LLID RH D+ ++ Sbjct: 69 GALYYVDLPGYGYAKVALEAKEKWGKMIERYLRNSAMLKMVFLLIDIRHEPSANDRMMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKG 198 ++ ++ TK+DK++ + Q+ ++ +IR + +IP S+ ++G Sbjct: 129 WIIYNGYHPVVIATKLDKINRSQVQKHVK----MIREGLGMEKDGIIIPFSAETKQG 181 >gi|160947714|ref|ZP_02094881.1| hypothetical protein PEPMIC_01649 [Parvimonas micra ATCC 33270] gi|158446848|gb|EDP23843.1| hypothetical protein PEPMIC_01649 [Parvimonas micra ATCC 33270] Length = 196 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 104/190 (54%), Gaps = 11/190 (5%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 I P + E+AF+GRSNVGKSS IN +NRKNLARTS+ PG+T+ +NF+ + Sbjct: 15 ISQYPDSDLKEVAFAGRSNVGKSSFINAFINRKNLARTSSKPGKTRTVNFYKINN----- 69 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + LVD+PGYGYA+ K + WG +I YLS R L V L++D RH + D Sbjct: 70 ----SFRLVDLPGYGYAQVSKSEKEKWGVIIETYLSNRENLCEVILIVDIRHAPSKEDVM 125 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++++L + S ++ TK DK+S + L+ + + VIP SS + +E Sbjct: 126 MYNWLLEYGFSGYVIATKADKISKGQWNKHLKVVRETLG--INDMNLVIPFSSDSKANLE 183 Query: 201 VLRKAILETI 210 + I E + Sbjct: 184 AVHNKIEEIL 193 >gi|229525007|ref|ZP_04414412.1| GTP-binding protein EngB [Vibrio cholerae bv. albensis VL426] gi|229338588|gb|EEO03605.1| GTP-binding protein EngB [Vibrio cholerae bv. albensis VL426] Length = 220 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|229527147|ref|ZP_04416541.1| GTP-binding protein EngB [Vibrio cholerae 12129(1)] gi|229335378|gb|EEO00861.1| GTP-binding protein EngB [Vibrio cholerae 12129(1)] Length = 220 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|329120860|ref|ZP_08249519.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria bacilliformis ATCC BAA-1200] gi|327459670|gb|EGF06012.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria bacilliformis ATCC BAA-1200] Length = 211 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 102/189 (53%), Gaps = 13/189 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP G EIAF GRSN GKSS IN L ++ LA S PGRTQH+NFF Sbjct: 9 FFTTVNRLQDLPDTGA-EIAFVGRSNAGKSSAINTLCDQVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N + D+PGYGYA+ P+ W GL+ YL R L + L++DCRH Sbjct: 66 ----ELQN---GAFMADLPGYGYAQVPEAVRRHWVGLLGEYLRTRRQLIGLVLIMDCRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 +K +D + F I+L+K DKLS +TL K ++ + + H +V Sbjct: 119 LKPLDVQMLDFFAPTGRPVHILLSKADKLSKNDQIKTLSSVKKALKPF-SRHGQVSVQLF 177 Query: 192 SSVKRKGIE 200 SS+K++G++ Sbjct: 178 SSLKKQGVD 186 >gi|227877366|ref|ZP_03995437.1| GTPase [Lactobacillus crispatus JV-V01] gi|256842925|ref|ZP_05548413.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus 125-2-CHN] gi|256848700|ref|ZP_05554134.1| ATP-dependent protease [Lactobacillus crispatus MV-1A-US] gi|262045892|ref|ZP_06018856.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus MV-3A-US] gi|293381820|ref|ZP_06627792.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus 214-1] gi|312978252|ref|ZP_07789995.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus CTV-05] gi|227863034|gb|EEJ70482.1| GTPase [Lactobacillus crispatus JV-V01] gi|256614345|gb|EEU19546.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus 125-2-CHN] gi|256714239|gb|EEU29226.1| ATP-dependent protease [Lactobacillus crispatus MV-1A-US] gi|260573851|gb|EEX30407.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus MV-3A-US] gi|290921606|gb|EFD98636.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus 214-1] gi|310894771|gb|EFQ43842.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus CTV-05] Length = 196 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 104/188 (55%), Gaps = 12/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 PK PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LNF+ V + F Sbjct: 19 PKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYKVNEKF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ +K +G +I YL R L+ + +L+D RH + D ++ Sbjct: 72 ---YLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILVDSRHEPTKDDIAMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + +V TK+DK+ + + + K + N H V+ SSV + + L Sbjct: 129 YAQYLNIPILVVCTKMDKIKKSQTNKVMSGLKKKL-NLNYDHVTVLTFSSVTKLHVTELS 187 Query: 204 KAILETIN 211 I + IN Sbjct: 188 NWIEKRIN 195 >gi|74316206|ref|YP_313946.1| cell division checkpoint GTPase YihA [Thiobacillus denitrificans ATCC 25259] gi|119369277|sp|Q3SMA6|ENGB_THIDA RecName: Full=Probable GTP-binding protein EngB gi|74055701|gb|AAZ96141.1| GTP-binding [Thiobacillus denitrificans ATCC 25259] Length = 206 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/176 (40%), Positives = 96/176 (54%), Gaps = 16/176 (9%) Query: 29 PP---EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 PP E+AF+GRSN GKSS IN+L + LA TS PGRTQ +NFF L A Sbjct: 23 PPSRAEVAFAGRSNAGKSSAINLLTRKNRLAFTSKTPGRTQLINFF----------ELTA 72 Query: 86 -MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ P + W GL+ RYL ER L + L++D RH + +D+ + + Sbjct: 73 DTYLVDLPGYGYAKVPPEVKAKWEGLLSRYLQEREALAGMVLIMDARHPLTPLDRQMLEW 132 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 I+L+K DKLS + TL K K + + T ++ SS+ R G E Sbjct: 133 FAPTGKPVHILLSKADKLSNSEKALTLRKVKQELADRETVSVQLF--SSLSRVGAE 186 >gi|304407486|ref|ZP_07389138.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus curdlanolyticus YK9] gi|304343437|gb|EFM09279.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus curdlanolyticus YK9] Length = 195 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/183 (39%), Positives = 104/183 (56%), Gaps = 11/183 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSSLIN ++ RKNLARTS+ PG+TQ LN++ K N Sbjct: 19 PEDALPEIALAGRSNVGKSSLINRMILRKNLARTSSQPGKTQQLNYY--------KIN-E 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD PGYGYA+ K ++WG +I +L R L+ V L++D RH + D ++ + Sbjct: 70 QIYFVDFPGYGYAKVSKTEREAWGRMIETFLKVREELKLVLLIVDIRHAPSKDDCLMYDW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + IV+TK DK+ + + ++ K ++ PT +VI SS G E L Sbjct: 130 LKHYEIPICIVVTKADKIPKSKWDKQIKLVKETLQADPT--DKVIMFSSELGLGREQLWD 187 Query: 205 AIL 207 IL Sbjct: 188 YIL 190 >gi|259500683|ref|ZP_05743585.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners DSM 13335] gi|302191373|ref|ZP_07267627.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners AB-1] gi|312871414|ref|ZP_07731509.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 3008A-a] gi|312872272|ref|ZP_07732342.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2062A-h1] gi|312875467|ref|ZP_07735470.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2053A-b] gi|325912884|ref|ZP_08175262.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners UPII 60-B] gi|259168067|gb|EEW52562.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners DSM 13335] gi|311088978|gb|EFQ47419.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2053A-b] gi|311092095|gb|EFQ50469.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2062A-h1] gi|311093067|gb|EFQ51416.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 3008A-a] gi|325477877|gb|EGC81011.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners UPII 60-B] Length = 195 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 10/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA SGRSNVGKSSLIN ++NR+NLARTS PG+TQ LNF++ Sbjct: 19 PQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTLNFYLVN---------T 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K+ +G +I YL R+ L+ + LL+D RH D ++F++ Sbjct: 70 DLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTVDDINMFNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + +V TKIDKL + + LE L + + +P SS + I+ K Sbjct: 130 ALCLNIPILVVATKIDKLKKSAIGQ-LESKIGLSLDLTQSQVTFLPFSSETKINIDKFWK 188 Query: 205 AILETI 210 I +I Sbjct: 189 WIENSI 194 >gi|153830625|ref|ZP_01983292.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148873897|gb|EDL72032.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 220 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|332159649|ref|YP_004296226.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603743|emb|CBY25241.1| GTP-binding protein EngB [Yersinia enterocolitica subsp. palearctica Y11] gi|325663879|gb|ADZ40523.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330858979|emb|CBX69338.1| putative GTP-binding protein engB [Yersinia enterocolitica W22703] Length = 217 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTGQKSLARTSKTPGRTQLINLF-- 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 71 -------EVVEGVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 124 LKDLDQQMITWAVAVGTPVMLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 183 LKKIGVDKLREKL 195 >gi|123440425|ref|YP_001004419.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166232162|sp|A1JHT4|ENGB_YERE8 RecName: Full=Probable GTP-binding protein EngB gi|122087386|emb|CAL10167.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 217 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTGQKSLARTSKTPGRTQLINLF-- 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 71 -------EVVEGVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 124 LKDLDQQMITWAVAVGTPVMLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 183 LKKIGVDKLREKL 195 >gi|15640143|ref|NP_229770.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587744|ref|ZP_01677505.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121728280|ref|ZP_01681311.1| conserved hypothetical protein [Vibrio cholerae V52] gi|153214830|ref|ZP_01949638.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153822336|ref|ZP_01975003.1| conserved hypothetical protein [Vibrio cholerae B33] gi|153826298|ref|ZP_01978965.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|227080347|ref|YP_002808898.1| putative GTP-binding protein engB [Vibrio cholerae M66-2] gi|229508389|ref|ZP_04397893.1| GTP-binding protein EngB [Vibrio cholerae BX 330286] gi|229508930|ref|ZP_04398420.1| GTP-binding protein EngB [Vibrio cholerae B33] gi|229517044|ref|ZP_04406490.1| GTP-binding protein EngB [Vibrio cholerae RC9] gi|229520097|ref|ZP_04409525.1| GTP-binding protein EngB [Vibrio cholerae TM 11079-80] gi|229606662|ref|YP_002877310.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae MJ-1236] gi|254226590|ref|ZP_04920171.1| conserved hypothetical protein [Vibrio cholerae V51] gi|254291920|ref|ZP_04962701.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|254851495|ref|ZP_05240845.1| GTPase EngB [Vibrio cholerae MO10] gi|255743935|ref|ZP_05417890.1| GTP-binding protein EngB [Vibrio cholera CIRS 101] gi|262151174|ref|ZP_06028313.1| GTP-binding protein EngB [Vibrio cholerae INDRE 91/1] gi|298501120|ref|ZP_07010920.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae MAK 757] gi|12644600|sp|Q9KVN0|ENGB_VIBCH RecName: Full=Probable GTP-binding protein EngB gi|254783219|sp|C3LPV3|ENGB_VIBCM RecName: Full=Probable GTP-binding protein EngB gi|9654510|gb|AAF93289.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548043|gb|EAX58121.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121629410|gb|EAX61839.1| conserved hypothetical protein [Vibrio cholerae V52] gi|124115073|gb|EAY33893.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|125620862|gb|EAZ49215.1| conserved hypothetical protein [Vibrio cholerae V51] gi|126520162|gb|EAZ77385.1| conserved hypothetical protein [Vibrio cholerae B33] gi|149739966|gb|EDM54145.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|150422130|gb|EDN14096.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227008235|gb|ACP04447.1| putative GTP-binding protein engB [Vibrio cholerae M66-2] gi|229342885|gb|EEO07875.1| GTP-binding protein EngB [Vibrio cholerae TM 11079-80] gi|229346107|gb|EEO11079.1| GTP-binding protein EngB [Vibrio cholerae RC9] gi|229354047|gb|EEO18980.1| GTP-binding protein EngB [Vibrio cholerae B33] gi|229354662|gb|EEO19584.1| GTP-binding protein EngB [Vibrio cholerae BX 330286] gi|229369317|gb|ACQ59740.1| GTP-binding protein EngB [Vibrio cholerae MJ-1236] gi|254847200|gb|EET25614.1| GTPase EngB [Vibrio cholerae MO10] gi|255738418|gb|EET93808.1| GTP-binding protein EngB [Vibrio cholera CIRS 101] gi|262031068|gb|EEY49693.1| GTP-binding protein EngB [Vibrio cholerae INDRE 91/1] gi|297540154|gb|EFH76215.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae MAK 757] Length = 220 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|229515855|ref|ZP_04405313.1| GTP-binding protein EngB [Vibrio cholerae TMA 21] gi|229347118|gb|EEO12079.1| GTP-binding protein EngB [Vibrio cholerae TMA 21] Length = 220 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|78189773|ref|YP_380111.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium chlorochromatii CaD3] gi|119368800|sp|Q3APK7|ENGB_CHLCH RecName: Full=Probable GTP-binding protein EngB gi|78171972|gb|ABB29068.1| GTP-binding protein [Chlorobium chlorochromatii CaD3] Length = 194 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 100/197 (50%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + LP+A PEI F+GRSNVGKSSL+N L K LA+TS PG+T+ +N+F+ Sbjct: 8 FVASYTSLHALPEAVLPEIVFAGRSNVGKSSLLNSLTGLKGLAKTSAKPGKTRQINYFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA + +WG L+ Y+ R + V +L+D RH Sbjct: 68 NEL---------FYFVDLPGYGYAAVSQSEKAAWGQLLANYIERRDAISLVVVLVDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + FL+ Y IV+TK DKL+ Q K + + + Y V+ SS Sbjct: 119 FMENDVAMLEFLEFHGRPYGIVMTKSDKLN----QSEKSKCQRVAKTYAAKAKFVVNYSS 174 Query: 194 VKRKGIEVLRKAILETI 210 G +L I +I Sbjct: 175 FSGAGKALLLSHIDHSI 191 >gi|261494156|ref|ZP_05990659.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310322|gb|EEY11522.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 203 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N F Sbjct: 10 FLTSAPDICHLPEDTGVEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +N K LVD+PGYGYA P++ W + YL +R L V +L+D RH Sbjct: 70 E--TNCK-------LVDLPGYGYAAVPEQMKIQWQKALGEYLQKRECLGGVVILMDIRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 121 LKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKMVREAILPF-QGDIQVEAYSA 179 Query: 194 VKRKGIEVL 202 + + GI+ L Sbjct: 180 LNKIGIDKL 188 >gi|295692730|ref|YP_003601340.1| GTP-binding protein engb [Lactobacillus crispatus ST1] gi|295030836|emb|CBL50315.1| Probable GTP-binding protein engB [Lactobacillus crispatus ST1] Length = 196 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 104/188 (55%), Gaps = 12/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 PK PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LNF+ V + F Sbjct: 19 PKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYKVNEKF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ +K +G +I YL R L+ + +L+D RH + D ++ Sbjct: 72 ---YLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILVDSRHEPTKDDIAMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + +V TK+DK+ + + + K + N H V+ SSV + + L Sbjct: 129 YAQYLNIPILVVCTKMDKIKKSQTNKVMSGLKKKL-NLNYDHVTVLTFSSVTKLHVTELS 187 Query: 204 KAILETIN 211 I + IN Sbjct: 188 NWIEKRIN 195 >gi|297537482|ref|YP_003673251.1| ribosome biogenesis GTP-binding protein YsxC [Methylotenera sp. 301] gi|297256829|gb|ADI28674.1| ribosome biogenesis GTP-binding protein YsxC [Methylotenera sp. 301] Length = 222 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 72/181 (39%), Positives = 101/181 (55%), Gaps = 13/181 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP A E+AF+GRSN GKSS +N L N LA S PGRTQ +NFF L N+ Sbjct: 19 LPPASGIEVAFAGRSNAGKSSALNTLANHNRLAFVSKQPGRTQLINFFT------LGND- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ P+ W ++ RYL ERS+L + L++D RH + +D+ + + Sbjct: 72 --RHLVDLPGYGYAKVPEAMRAHWQNVLARYLGERSSLGGLVLVMDSRHPLTPLDRQMLN 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTA-HPEVIPT--SSVKRKGI 199 + ++LTK DKLS A TL + K L+ + H E SS+K++G+ Sbjct: 130 WFCPSGKPVHVLLTKSDKLSRGEASLTLNRVRKELVETWGNHYHSECTIQLFSSLKKQGV 189 Query: 200 E 200 E Sbjct: 190 E 190 >gi|262039420|ref|ZP_06012727.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia goodfellowii F0264] gi|261746556|gb|EEY34088.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia goodfellowii F0264] Length = 198 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 23/213 (10%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + + F KSA ++ + PE K G E +F GRSNVGKSSLIN L NR+NLARTS Sbjct: 3 IKKSEFVKSA-VYEKDYPE-----KKGI-EFSFIGRSNVGKSSLINSLTNRRNLARTSKT 55 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL-SERST 120 PGRTQ +N+F+ + VD+PGYG+A+ P+ +WG I YL SER Sbjct: 56 PGRTQLINYFLID---------SEIYFVDLPGYGFAKVPEAVKRNWGTTIETYLKSERD- 105 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + V+LL+D R D ++ +L+ + Y I+ TK DKLS + L++ K + Sbjct: 106 -KVVFLLLDLRRIPSGEDMEMLRWLEHYNIEYYIIFTKSDKLSNNEKAKQLKEIK---KK 161 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI-NY 212 + +V +S++K G E L I E + NY Sbjct: 162 LEFNNEDVFFSSALKNTGKEELLDFIYEKVKNY 194 >gi|153803406|ref|ZP_01957992.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124121063|gb|EAY39806.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 220 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|323493193|ref|ZP_08098323.1| putative GTP-binding protein EngB [Vibrio brasiliensis LMG 20546] gi|323312540|gb|EGA65674.1| putative GTP-binding protein EngB [Vibrio brasiliensis LMG 20546] Length = 221 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 105/195 (53%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 123 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGF-GGDVSVAAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++VLR + E Sbjct: 182 LKGIGVDVLRSKLDE 196 >gi|260775066|ref|ZP_05883965.1| GTP-binding protein EngB [Vibrio coralliilyticus ATCC BAA-450] gi|260608983|gb|EEX35143.1| GTP-binding protein EngB [Vibrio coralliilyticus ATCC BAA-450] Length = 220 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I +P+ E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHMPEDEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 123 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDSAGF-GGDVSVAAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++VLR + E Sbjct: 182 LKGIGVDVLRNKLDE 196 >gi|227529062|ref|ZP_03959111.1| GTPase [Lactobacillus vaginalis ATCC 49540] gi|227351074|gb|EEJ41365.1| GTPase [Lactobacillus vaginalis ATCC 49540] Length = 202 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 63/140 (45%), Positives = 83/140 (59%), Gaps = 9/140 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA GRSNVGKSSL N+L+NR+N A TS+ PG+TQ LNF+ +D Sbjct: 23 PATNYPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYNVED--------- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + +G +I YL+ R LR V L+D RH D ++ + Sbjct: 74 ELYFVDVPGYGYAKVSKKERERFGKMIEEYLTTRQQLRGVIQLVDGRHKPTADDVSMYQW 133 Query: 145 LDKKAVSYQIVLTKIDKLSP 164 L + IV TKIDK+ P Sbjct: 134 LAYYDIPTLIVGTKIDKVKP 153 >gi|262370585|ref|ZP_06063910.1| GTPase EngB [Acinetobacter johnsonii SH046] gi|262314385|gb|EEY95427.1| GTPase EngB [Acinetobacter johnsonii SH046] Length = 286 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 109/199 (54%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 47 FLMSAPKLNLCVEDTGYEIAFAGRSNAGKSSAINALTNQKQLARASKRPGRTQMINFF-- 104 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL +R +L+ + LL+D RH Sbjct: 105 ----SLGN--PDQRLVDLPGYGYAAVPEAMKIVWQKELENYLIQRKSLQGLVLLMDIRHP 158 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + ++LTK DKL+ A + L++ K ++ + SS Sbjct: 159 LQHFDVMMLEWAYSRKLFVHVLLTKSDKLNRGPASKALQEVKAQLKKMKLDFS-IQLFSS 217 Query: 194 VKRKGIEVLRKAILETINY 212 + ++G+E L + +N+ Sbjct: 218 LNKQGLEELASVMGGRLNF 236 >gi|147674030|ref|YP_001218307.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae O395] gi|262167044|ref|ZP_06034761.1| GTP-binding protein EngB [Vibrio cholerae RC27] gi|172047517|sp|A5F4I0|ENGB_VIBC3 RecName: Full=Probable GTP-binding protein EngB gi|146315913|gb|ABQ20452.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227011887|gb|ACP08097.1| putative GTP-binding protein engB [Vibrio cholerae O395] gi|262024562|gb|EEY43246.1| GTP-binding protein EngB [Vibrio cholerae RC27] Length = 220 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNTGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|299143345|ref|ZP_07036425.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517830|gb|EFI41569.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 201 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 70/180 (38%), Positives = 99/180 (55%), Gaps = 15/180 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ E AF+GRSNVGKSS IN ++ RKNLARTS+ PG+T+ +NF+ D Sbjct: 19 PEMDLFEFAFAGRSNVGKSSFINSMLGRKNLARTSSTPGKTRTINFYRVND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR K SW +I YL +R L V LL+D RH + D ++ + Sbjct: 70 DLRLVDLPGYGYARVSKTEKSSWSKIINEYLDDRENLLEVVLLVDIRHEPTEQDLQMYEY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEK--TKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + K S ++ TK DK+S + K K I+N +IP SSV + ++ + Sbjct: 130 ILSKGYSGIVIATKADKISRGQYAGHISKIAKKLSIKNRDM----IIPFSSVDKNMVDEM 185 >gi|261823707|ref|YP_003261813.1| ribosome biogenesis GTP-binding protein YsxC [Pectobacterium wasabiae WPP163] gi|261607720|gb|ACX90206.1| ribosome biogenesis GTP-binding protein YsxC [Pectobacterium wasabiae WPP163] Length = 211 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I L E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 12 FIISAPDIRHLATDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFQV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R++L+ + +L+D RH Sbjct: 72 AD---------GVRLVDLPGYGYAEVPEQMKIKWQRALGEYLQKRNSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 123 LKDLDQQMIQWAVDVKLPVLVLLTKADKLASGARKTQLHMVREAVAPF-MGDIQVEAFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ L++ + Sbjct: 182 LKKIGVDKLQQKL 194 >gi|154492901|ref|ZP_02032527.1| hypothetical protein PARMER_02540 [Parabacteroides merdae ATCC 43184] gi|154087206|gb|EDN86251.1| hypothetical protein PARMER_02540 [Parabacteroides merdae ATCC 43184] Length = 198 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 13/187 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L +K LA TS PG+T +N F+ Sbjct: 19 PTGDLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTLLINHFLING--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYG+A+ K+ ++ +I Y+ ER L +++LIDCRH ++ID + + Sbjct: 70 QWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLIDCRHEPQKIDLEFMEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + + ++ TKIDK+S QE L+ + + P ++ +SS K++G R Sbjct: 130 LGENEIPFSLIFTKIDKISKGRLQENLKVYQTKLLESWEELPPILLSSSEKKEG----RD 185 Query: 205 AILETIN 211 IL I+ Sbjct: 186 KILNYID 192 >gi|299065446|emb|CBJ36615.1| probable GTP-binding protein engB [Ralstonia solanacearum CMR15] Length = 222 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 8/188 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSN GKS+ IN+L N+K LA +S PGRTQH+N+F L Sbjct: 22 LPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSVMPAKALD--- 78 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P + W L+ Y+ RS L + +++D R +D + Sbjct: 79 PLGFLVDLPGYGYAQVPGEAKSHWEHLLGDYIQTRSQLAGLVIMMDARRPFTDLDCQMVE 138 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPT----SSVKRKG 198 + ++LTK DKL+ A L + ++ Y EV T SS+KR+G Sbjct: 139 WFLPTGKPVHVLLTKADKLTNNDASRALMSARKVLAGYREQIEGEVSLTVQLFSSLKRRG 198 Query: 199 IEVLRKAI 206 IE ++ + Sbjct: 199 IEEAQRTV 206 >gi|300702811|ref|YP_003744412.1| GTP-binding protein engb [Ralstonia solanacearum CFBP2957] gi|299070473|emb|CBJ41768.1| probable GTP-binding protein engB [Ralstonia solanacearum CFBP2957] Length = 233 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 8/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA +S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L P LVD+PGYGYA P + W L+ YL R L + +++D R Sbjct: 69 MPAKALD---PLGFLVDLPGYGYAEVPGEAKSHWEHLLGDYLQTRPQLAGLIIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPT- 191 +D + + ++LTK DKL+ A L + ++ +Y T +V T Sbjct: 126 FTDLDCQMVEWFLATGKPIHVLLTKADKLTNNDASRALMSARKVLADYRTQIEGDVSLTV 185 Query: 192 ---SSVKRKGIEVLRKAI 206 SS+KR+GIE ++ + Sbjct: 186 QLFSSLKRRGIEEAQRTV 203 >gi|289812207|ref|ZP_06542836.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 163 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 61/150 (40%), Positives = 88/150 (58%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VD---------GKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K +DQ + + + + ++LTK DKL+ Sbjct: 122 LKDLDQQMIQWAVESNIQVLVLLTKADKLA 151 >gi|21241496|ref|NP_641078.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas axonopodis pv. citri str. 306] gi|294627677|ref|ZP_06706259.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667105|ref|ZP_06732330.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|24418373|sp|Q8PPG1|ENGB_XANAC RecName: Full=Probable GTP-binding protein EngB gi|21106841|gb|AAM35614.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306] gi|292598029|gb|EFF42184.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603115|gb|EFF46541.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 214 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 93/180 (51%), Gaps = 9/180 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 20 LPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ--------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 71 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 131 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESRQGVDELR 190 >gi|186477556|ref|YP_001859026.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia phymatum STM815] gi|238691302|sp|B2JI34|ENGB_BURP8 RecName: Full=Probable GTP-binding protein EngB gi|184194015|gb|ACC71980.1| GTP-binding protein HSR1-related [Burkholderia phymatum STM815] Length = 220 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP + PE+AF+GRSN GKS+ INIL N+K LA S PGRTQH+N+F Sbjct: 10 FFTTVNHLRDLPPSPQPEVAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINYFSV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL RS LR + L++D R Sbjct: 70 GPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEQLLSTYLQTRSQLRGMILMMDSRRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 + ++D+ + + +LTK DKL+ + L TK + Y A + T Sbjct: 125 LTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVNALRATKKGLDEYRAAGYQGELTAQ 184 Query: 192 --SSVKRKGIEVLRKAI 206 S++KR G++ + I Sbjct: 185 LFSALKRIGLDEAHELI 201 >gi|91216020|ref|ZP_01252989.1| GTP-binding protein [Psychroflexus torquis ATCC 700755] gi|91185997|gb|EAS72371.1| GTP-binding protein [Psychroflexus torquis ATCC 700755] Length = 199 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 95/185 (51%), Gaps = 9/185 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P + PE AF GRSNVGKSSLIN+L R +LA+ S PG+T+ +N F+ Sbjct: 8 FVMSNSDVTKCPNSQLPEYAFIGRSNVGKSSLINMLTERNSLAKVSGKPGKTRLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA+ KK ++ I Y +R L ++LID RH Sbjct: 68 ND---------SWHLVDLPGYGYAKVSKKEKKTFQKYITAYFEKRQQLVNTFVLIDSRHA 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + +D + +L K A+ IV TK DKL P + + K + P TSS Sbjct: 119 PQPLDLEFLEWLGKNAIPLSIVFTKTDKLKPKVLENNIIDYKTKLMETWEELPPYFTTSS 178 Query: 194 VKRKG 198 + G Sbjct: 179 AHKTG 183 >gi|314933828|ref|ZP_07841193.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus caprae C87] gi|313653978|gb|EFS17735.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus caprae C87] Length = 195 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 11/171 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNFF N Sbjct: 21 PETNLSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFF---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I YL++R LR V L+D RH + D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKAQREKFGKMIEEYLTQRENLRLVIQLVDLRHNPTEDDVLMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 L + ++ TK DK++ Q+ L+ K + P +I SS+K Sbjct: 132 LKHFDIPTLVICTKEDKIAKGKVQKHLKNIKDKLELEP--EDSIISYSSIK 180 >gi|212696595|ref|ZP_03304723.1| hypothetical protein ANHYDRO_01135 [Anaerococcus hydrogenalis DSM 7454] gi|212676326|gb|EEB35933.1| hypothetical protein ANHYDRO_01135 [Anaerococcus hydrogenalis DSM 7454] Length = 195 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 58/142 (40%), Positives = 85/142 (59%), Gaps = 9/142 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P EIAF+GRSNVGKSS IN + +KNLA+TS+ PG+T+ +NF+ D Sbjct: 18 FPNDNFDEIAFAGRSNVGKSSFINSFLGKKNLAKTSSKPGKTKTINFYKIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ KK + W LI YL +R L+ V+LL+D RH + D++++ Sbjct: 70 -KFRLVDLPGYGYAKVSKKEKEKWNNLIHEYLYKRENLKEVFLLVDIRHAPTKQDKEMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPT 165 ++ + ++ TK DK+ T Sbjct: 129 WIIDSGFTGFVIATKYDKIPKT 150 >gi|25011424|ref|NP_735819.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus agalactiae NEM316] gi|81845601|sp|Q8E4L9|ENGB_STRA3 RecName: Full=Probable GTP-binding protein EngB gi|24412962|emb|CAD47041.1| unknown [Streptococcus agalactiae NEM316] Length = 198 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 63/138 (45%), Positives = 79/138 (57%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ D Sbjct: 24 PQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDD--------- 74 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL R LR V L+D RH D ++ F Sbjct: 75 KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDNLRVVVSLVDFRHDPSADDIQIYEF 134 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + IV TK DK+ Sbjct: 135 LKYYEIPVIIVATKADKI 152 >gi|116878627|ref|YP_358147.2| ribosome biogenesis GTP-binding protein YsxC [Pelobacter carbinolicus DSM 2380] gi|119369227|sp|Q3A0Y0|ENGB_PELCD RecName: Full=Probable GTP-binding protein EngB gi|114843263|gb|ABA89977.2| GTP-binding protein [Pelobacter carbinolicus DSM 2380] Length = 207 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 11/140 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P PE+AF+GRSNVGKSSLIN+LVNR+ L RTS+ PGRTQ LNFF V + F Sbjct: 19 PPGDLPEVAFAGRSNVGKSSLINVLVNRRGLVRTSSTPGRTQLLNFFEVNQHF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PG+G+A+ P +WG + YL ER+ L+ V LL D R + + + Sbjct: 72 ---MLVDLPGFGFAKVPVSVKKAWGRMTRTYLEERTNLKAVVLLFDIRREPRDEELQLLD 128 Query: 144 FLDKKAVSYQIVLTKIDKLS 163 +L++ + V+TK+DK++ Sbjct: 129 WLEELNIPTIPVITKVDKVT 148 >gi|302346369|ref|YP_003814667.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella melaninogenica ATCC 25845] gi|302150963|gb|ADK97224.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella melaninogenica ATCC 25845] Length = 198 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 63/155 (40%), Positives = 91/155 (58%), Gaps = 9/155 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + P+ E AF GRSNVGKSSLIN+L N K LA+TS+ PG+T +N F+ Sbjct: 8 FTISSPSLSKCPEDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA++ K + +I +Y+ +R L V++LID RH Sbjct: 68 NN---------EWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 ++ID++ +L + V + I+ TK DKLSP A+ Sbjct: 119 QQKIDREFVDWLGESNVPFSIIFTKADKLSPAKAK 153 >gi|238923372|ref|YP_002936888.1| GTPase EngB [Eubacterium rectale ATCC 33656] gi|238875047|gb|ACR74754.1| GTPase EngB [Eubacterium rectale ATCC 33656] gi|291525459|emb|CBK91046.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Eubacterium rectale DSM 17629] gi|291528433|emb|CBK94019.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Eubacterium rectale M104/1] Length = 260 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 70/175 (40%), Positives = 100/175 (57%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P E+AF+G+SNVGKSSLIN L+NRK+LAR S+ PG+TQ +NF+ D Sbjct: 18 IPDNEYNEVAFAGKSNVGKSSLINALMNRKSLARISSQPGKTQTINFYNVND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 AM LVD+PGYGYA A + WG +I YL L+ V+LLID RH D ++ Sbjct: 70 -AMYLVDLPGYGYANANIEIKAKWGQMIENYLHTSKKLQAVFLLIDIRHEPSDNDIMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ + + I+ TK DKL + ++ K ++ P VIP SS+ ++G Sbjct: 129 WMVNQGFAPIIIATKSDKLKKSQIAAHIKTIKDVLHVKPGT--VVIPFSSMSKEG 181 >gi|229918355|ref|YP_002887001.1| ribosome biogenesis GTP-binding protein YsxC [Exiguobacterium sp. AT1b] gi|259645896|sp|C4L4J3|ENGB_EXISA RecName: Full=Probable GTP-binding protein EngB gi|229469784|gb|ACQ71556.1| small GTP-binding protein [Exiguobacterium sp. AT1b] Length = 197 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 60/140 (42%), Positives = 86/140 (61%), Gaps = 9/140 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+A +GRSNVGKSS IN + RK LARTS+ PG+TQ LNFF N+ + + V Sbjct: 24 PEVALAGRSNVGKSSFINKICQRKALARTSSKPGKTQTLNFF------NINDEI---MFV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K + WG ++ +YL+ + LR V LL+D RH D +++FL Sbjct: 75 DVPGYGYAKVSKTEREKWGVMMEQYLTSQEALRGVVLLVDIRHDPTGDDVTMYNFLKHYE 134 Query: 150 VSYQIVLTKIDKLSPTTAQE 169 + +V TK+DK+ + Q+ Sbjct: 135 IPVIVVATKLDKIKKSQRQK 154 >gi|18424095|ref|NP_568876.1| GTP binding [Arabidopsis thaliana] gi|14334980|gb|AAK59667.1| putative GTP-binding protein CGPA [Arabidopsis thaliana] gi|17104637|gb|AAL34207.1| putative GTP-binding protein CGPA [Arabidopsis thaliana] gi|332009660|gb|AED97043.1| putative GTP-binding protein CGPA [Arabidopsis thaliana] Length = 446 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 96/164 (58%), Gaps = 10/164 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEIAF+GRSNVGKSSL+N L + + RTS+ PG TQ +NFF Sbjct: 283 FPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFF---------GLG 333 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + LVD+PGYG+A A + ++W L+ Y+S R++L+ V LL+D + G+K DQ++ + Sbjct: 334 PKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTKWGMKPRDQELIN 393 Query: 144 FLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHP 186 +++ YQIVLTK D + P A+ ++ + L N P Sbjct: 394 LMERSNTKYQIVLTKTDVVFPIDVARRAMQIEEKLKANRSIVQP 437 >gi|145639362|ref|ZP_01794968.1| GTPase EngB [Haemophilus influenzae PittII] gi|145271665|gb|EDK11576.1| GTPase EngB [Haemophilus influenzae PittII] Length = 205 Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 88/153 (57%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + +YL +R L + +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQMKIQWQKSLGKYLQKRECLAGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSANLPILLLLTKADKLSQSA 156 >gi|327395815|dbj|BAK13237.1| probable GTP-binding protein EngB [Pantoea ananatis AJ13355] Length = 246 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 46 FILSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 106 AE---------GKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVVLMDIRHP 156 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L K + +V SS Sbjct: 157 LKDLDQQMIQWAVESEIPVLLLLTKADKLASGARKAQLNMVKEASMAF-MGDVQVEVFSS 215 Query: 194 VKRKGIEVLR 203 +K+ G++ +R Sbjct: 216 LKKIGVDKVR 225 >gi|261496003|ref|ZP_05992413.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308253|gb|EEY09546.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] Length = 203 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 106/189 (56%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I LP+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N F Sbjct: 10 FLTSAPDIRHLPEDTGVEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +N K LVD+PGYGYA P++ W + YL +R L V +L+D RH Sbjct: 70 E--TNCK-------LVDLPGYGYAAVPEQMKIQWQKALGEYLQKRECLGGVVILMDIRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKLS + + ++ + I + +V S+ Sbjct: 121 LKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKMVREAILPF-QGDIQVEAYSA 179 Query: 194 VKRKGIEVL 202 + + GI+ L Sbjct: 180 LNKIGIDKL 188 >gi|304399054|ref|ZP_07380923.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. aB] gi|304353514|gb|EFM17892.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. aB] Length = 211 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K+ LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 KE---------GKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVILMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+ + ++ + + ++LTK DKL+ + L + + +V SS Sbjct: 122 LKDLDRQMINWSVESGIPVLLLLTKADKLASGARKAQLNVVREAALEF-VGDVQVELFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ +R+ + Sbjct: 181 LKKIGVDKVRQKL 193 >gi|332970221|gb|EGK09214.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter sp. 1501(2011)] Length = 234 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 103/193 (53%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P L P E+AF+GRSN GKSS IN+L N++ LAR+S PGRTQ +NFF Sbjct: 38 FLMSAPTFKLCPADTGYEVAFAGRSNAGKSSAINVLTNQRQLARSSKTPGRTQMINFF-- 95 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ N LVD+PGYGYA P+K W + YL R +L + LL+D RH Sbjct: 96 ----SIGNE--EARLVDLPGYGYAAVPEKMKLVWQTELEEYLVSRESLAGLVLLMDSRHP 149 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + ++LTK DK A+ L +TK + + SS Sbjct: 150 LKFFDEQMLHWAKDGELPVHVLLTKADKFKYGPAKNILLQTKRELEKLDLPF-SIQLFSS 208 Query: 194 VKRKGIEVLRKAI 206 +K++GI+ L + + Sbjct: 209 LKKEGIDELAEVM 221 >gi|258511808|ref|YP_003185242.1| ribosome biogenesis GTP-binding protein YsxC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478534|gb|ACV58853.1| ribosome biogenesis GTP-binding protein YsxC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 220 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 13/178 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE AF GRSNVGKS+L+N L+NRK LAR S+ PG+T+ +NF+ L N Sbjct: 19 PKTMLPEFAFLGRSNVGKSTLLNRLLNRKQLARVSSQPGKTRQINFY-------LINQ-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA K+ + +I RYL++R LR ++ LID RH + D V + Sbjct: 70 SFRFVDLPGYGYAAVSKQERQRFAAMIDRYLNDRECLRRIFHLIDIRHEPTKDDVAVHAA 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + V +V TK DK+ + + K +IR+ ++ P S+ KR G+E L Sbjct: 130 LLELGVPVSVVATKADKI----GRSHVPKHVKVIRDTLRTPVDIWPVSAEKRTGLEAL 183 >gi|58583504|ref|YP_202520.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428098|gb|AAW77135.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 258 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 67/180 (37%), Positives = 93/180 (51%), Gaps = 9/180 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 71 LPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ--------- 121 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 122 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 181 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 182 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGQSRQGVDELR 241 >gi|297616506|ref|YP_003701665.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophothermus lipocalidus DSM 12680] gi|297144343|gb|ADI01100.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophothermus lipocalidus DSM 12680] Length = 198 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 62/144 (43%), Positives = 88/144 (61%), Gaps = 9/144 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 +I LP +G PEIA +GRSNVGKSSLIN L NR+NLA TS+ PG+T+ +N+++ D Sbjct: 17 DIESLPASGLPEIALAGRSNVGKSSLINCLANRRNLALTSSTPGKTRTINYYLFDD---- 72 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 A LVD+PGYGYA+ + W LI +YL ER L+ V ++D RH + D+ Sbjct: 73 -----AWFLVDLPGYGYAKVSQAERKRWSLLIEKYLKERRQLKGVVQVVDIRHHPTETDK 127 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLS 163 + +L + +V TK DK++ Sbjct: 128 LMSEWLGYHQIPRTVVATKADKIA 151 >gi|291619507|ref|YP_003522249.1| EngB [Pantoea ananatis LMG 20103] gi|291154537|gb|ADD79121.1| EngB [Pantoea ananatis LMG 20103] Length = 246 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 46 FILSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 106 AE---------GKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVVLMDIRHP 156 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L K + +V SS Sbjct: 157 LKDLDQQMIQWAVESEIPVLLLLTKADKLASGARKAQLNMVKEASMAF-MGDVQVEVFSS 215 Query: 194 VKRKGIEVLR 203 +K+ G++ +R Sbjct: 216 LKKIGVDKVR 225 >gi|325479728|gb|EGC82818.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus prevotii ACS-065-V-Col13] Length = 195 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 101/188 (53%), Gaps = 11/188 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P E+AF GRSNVGKSS IN + RKNLA+TS+ PG+T+ +NF+ + NN Sbjct: 19 PSEDLVELAFVGRSNVGKSSFINSFLGRKNLAKTSSKPGKTRTINFY------RINNNF- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK W LI YL ER LR V+LL+D RH D+ ++ + Sbjct: 72 --RLVDLPGYGYAKVSKKEKAKWDKLINEYLYERDNLREVFLLVDIRHEPTAQDKQMYDW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + + ++ TK DK+ Q+ + + K + + SS + +VL + Sbjct: 130 IIESGFTGFVIATKFDKIKKGQIQKHINQIKKKLN--IEDEGLIFAYSSETKHNKDVLEE 187 Query: 205 AILETINY 212 + INY Sbjct: 188 QVDVIINY 195 >gi|162455894|ref|YP_001618261.1| GTP-binding protein [Sorangium cellulosum 'So ce 56'] gi|161166476|emb|CAN97781.1| predicted GTP-binding protein [Sorangium cellulosum 'So ce 56'] Length = 324 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 11/166 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G + LP E+AF+GRSNVGKSSLIN LV RK L RTS+ PG T+ +N + Sbjct: 101 FVAGAGSLASLPPPVSAEVAFAGRSNVGKSSLINTLVERKGLVRTSSNPGSTRQINLYEA 160 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYG+ R K +W LI YL R TL V LL+D R G Sbjct: 161 R-----ARDGAVFQLVDLPGYGFTRRSKSEQAAWASLIEGYLRGRVTLAAVLLLVDARRG 215 Query: 134 VKQIDQDVFSFLD------KKAVSYQIVLTKIDKLSPTTAQETLEK 173 +++ D ++ F++ ++ V +V TK+DK+ ++ + L++ Sbjct: 216 LEEDDLELIRFIEASRDVARRPVELLLVATKVDKVQRSSVRRALDQ 261 >gi|288802585|ref|ZP_06408024.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella melaninogenica D18] gi|288335113|gb|EFC73549.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella melaninogenica D18] Length = 198 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 64/155 (41%), Positives = 93/155 (60%), Gaps = 9/155 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + P+ E AF GRSNVGKSSLIN+L N K LA+TS+ PG+T +N F+ Sbjct: 8 FTISSPSLSKCPEDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLINHFI- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N+ LVD+PGYGYA++ K + +I +Y+ +R L V++LID RH Sbjct: 67 -----INND---WYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 ++ID++ +L + V + I+ TK DKLSP A+ Sbjct: 119 QQKIDREFVDWLGESNVPFSIIFTKADKLSPAKAK 153 >gi|297581847|ref|ZP_06943768.1| GTPase EngB [Vibrio cholerae RC385] gi|297533941|gb|EFH72781.1| GTPase EngB [Vibrio cholerae RC385] Length = 220 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECEIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|296328557|ref|ZP_06871076.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154366|gb|EFG95165.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 194 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 23/207 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F KSA ++ + PE + E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 8 FVKSA-VYEKDYPE-----QLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++ Sbjct: 62 LINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFV 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTA 184 L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ KT+ + N Sbjct: 112 LLDIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLIFDN---- 167 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETIN 211 +V SS+ KG + + + E +N Sbjct: 168 -EDVFFHSSLTNKGRDEILNFMEEKLN 193 >gi|239503241|ref|ZP_04662551.1| GTPase EngB [Acinetobacter baumannii AB900] Length = 258 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 94/166 (56%), Gaps = 8/166 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P++ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPEEMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++ D + + + + I+LTK DKL+ A + L + K ++ Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLK 203 >gi|270158580|ref|ZP_06187237.1| GTP-binding domain protein [Legionella longbeachae D-4968] gi|269990605|gb|EEZ96859.1| GTP-binding domain protein [Legionella longbeachae D-4968] Length = 200 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 16/190 (8%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ + LP E+AF+GRSN GKSS +N L KNLARTS PGRTQ +N F Sbjct: 10 VFLKSAARVSQLPDDSGYEVAFAGRSNAGKSSALNCLTGIKNLARTSKTPGRTQLINLFQ 69 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + A LVD+PGYGYA+ + W + YL R +L+ + LL+D RH Sbjct: 70 LDE---------AHRLVDLPGYGYAKVALRVKMDWQENLAHYLEVRKSLKGLILLMDIRH 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT- 191 +K +D + + + + I+LTK DKLS + + T+ K +R Y +I Sbjct: 121 PLKDLDVMMVDWALDRGLPVHILLTKSDKLSRSEIKNTVSK----VRKYYELAQHLITVQ 176 Query: 192 --SSVKRKGI 199 SS+K+ GI Sbjct: 177 SFSSLKKDGI 186 >gi|330004746|ref|ZP_08305015.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. MS 92-3] gi|328536532|gb|EGF62869.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. MS 92-3] Length = 175 Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 61/150 (40%), Positives = 88/150 (58%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ P++ W + YL +R L+ + +L+D RH Sbjct: 71 AE---------GKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K +DQ + + + + ++LTK DKL+ Sbjct: 122 LKDLDQQMIEWAVESDIQVLVLLTKADKLA 151 >gi|242054307|ref|XP_002456299.1| hypothetical protein SORBIDRAFT_03g033710 [Sorghum bicolor] gi|241928274|gb|EES01419.1| hypothetical protein SORBIDRAFT_03g033710 [Sorghum bicolor] Length = 312 Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 79/193 (40%), Positives = 101/193 (52%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 125 PRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKVND--------- 175 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA AP++ +W Y R L V+LLID K+ID D S+ Sbjct: 176 SWYLVDLPGYGYASAPQEARTNWDEFTRNYFLSRENLVSVFLLIDASIPAKKIDLDYASW 235 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + V +V TK DK +E +E + LIR Y A P I TSSV +G Sbjct: 236 LGQNKVPMTLVFTKCDKRKKKKNGGRRPEENVETFQSLIREYFEAAPPWIMTSSVTNQGR 295 Query: 200 EVLRKAILETINY 212 + + + + NY Sbjct: 296 DEILLHMSQLRNY 308 >gi|90019724|ref|YP_525551.1| ribosome biogenesis GTP-binding protein YsxC [Saccharophagus degradans 2-40] gi|119369251|sp|Q21PP0|ENGB_SACD2 RecName: Full=Probable GTP-binding protein EngB gi|89949324|gb|ABD79339.1| cell division checkpoint GTPase YihA [Saccharophagus degradans 2-40] Length = 213 Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 103/199 (51%), Gaps = 18/199 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I P E+AF+GRSN GKSS IN L LARTS PGRTQ +NFF Sbjct: 11 FLISAPSIRQCPTEEGTEVAFAGRSNAGKSSAINTLTGNGKLARTSKTPGRTQLINFF-- 68 Query: 74 KDFSNLKNNLPA---MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 N PA +VD+PGYGYA+ P W + YL +R LR + +++D Sbjct: 69 --------NFPAAPDQRIVDLPGYGYAKVPMAVKKKWQADLSEYLQQRDALRGLVIVMDI 120 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH ++ D + ++ + + ++LTK DKL P A+ TL + +R+ +++ Sbjct: 121 RHPLQDFDTMMINWAVEGEMPVHLLLTKADKLKPGAAKSTLLAVQKHMRDAQV--DDLVS 178 Query: 191 T---SSVKRKGIEVLRKAI 206 S++K++GI L + Sbjct: 179 AQMFSALKKQGINQLEDVL 197 >gi|308807338|ref|XP_003080980.1| Predicted GTPase (ISS) [Ostreococcus tauri] gi|116059441|emb|CAL55148.1| Predicted GTPase (ISS) [Ostreococcus tauri] Length = 444 Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 64/152 (42%), Positives = 95/152 (62%), Gaps = 15/152 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF+GRSNVGKSSLIN L ++AR+S+ PG+TQ LNF+ + + LV Sbjct: 163 PEIAFAGRSNVGKSSLINALT-LSSVARSSDVPGKTQSLNFYSLGE---------RIRLV 212 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A + V++W L+ RYL+ R L+ VY+++D RHG+K D+++ +FL K Sbjct: 213 DLPGYGFAFAKQARVETWNELMDRYLTSRPNLKRVYIVVDARHGLKASDREMLAFLSKYG 272 Query: 150 -VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 ++L K D ++P L + YLI+ Sbjct: 273 ETQCAVILNKCDCVNPN----DLARRAYLIQE 300 >gi|256827738|ref|YP_003151697.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Cryptobacterium curtum DSM 15641] gi|256583881|gb|ACU95015.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Cryptobacterium curtum DSM 15641] Length = 196 Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 101/198 (51%), Gaps = 13/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + +P + PEI+F GRSNVGKSSL+N + +RK+L + S PG TQ++NFF Sbjct: 8 FVASYAQADQVPVSIRPEISFVGRSNVGKSSLMNKVFSRKDLVKVSQKPGCTQNINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N+ + VD+PGYGYA+ K + W L+ Y + LID RH Sbjct: 66 --------NVGEVDFVDLPGYGYAKVSKAEMGRWRPLVEGYFKQDRRFALCVSLIDIRHE 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI-PTS 192 V +D+ + FL + + I TK DKLS + + + L + A V+ P S Sbjct: 118 VSDLDKQMIGFLQSHEIPFMIAFTKADKLSSKS--KVRAQVATLCKQLAAAGDVVVLPVS 175 Query: 193 SVKRKGIEVLRKAILETI 210 S+K GI LR I + I Sbjct: 176 SLKGDGIADLRSLIDDAI 193 >gi|302671760|ref|YP_003831720.1| GTP-binding protein [Butyrivibrio proteoclasticus B316] gi|302396233|gb|ADL35138.1| GTP-binding protein [Butyrivibrio proteoclasticus B316] Length = 200 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 15/177 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE AF+G+SNVGKSSLIN ++NRKN ARTS PG+TQ +N++ D Sbjct: 18 LPDNIHPEFAFAGKSNVGKSSLINGIMNRKNYARTSQEPGKTQTINYYNIND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYG+AR P+K + WG +I YL L V+LLID RH D ++ Sbjct: 70 -EFYLVDLPGYGFARVPEKVKEQWGKMIENYLHTSRQLLRVFLLIDIRHEPSANDVQMYK 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKG 198 ++ + I+ TK DK+ + ++ L ++RN E + P S++ ++G Sbjct: 129 WIVHQGFQPVIIATKSDKIKKSQHEKHLN----MLRNTLGLPDEIKIFPYSALSKEG 181 >gi|209693840|ref|YP_002261768.1| ribosome biogenesis GTP-binding protein YsxC [Aliivibrio salmonicida LFI1238] gi|208007791|emb|CAQ77913.1| probable gtp-binding protein EngB [Aliivibrio salmonicida LFI1238] Length = 224 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 106/190 (55%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 21 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSALNRLTNQRSLAKTSKTPGRTQLINLFKV 80 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 81 DENCH---------IVDLPGYGFAQVPIELKKKWQKSLGEYLQKRECLKGLVVLMDIRHP 131 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + +A+ Q++LTK DKL Q + K + + V SS Sbjct: 132 MKDLDQQLIYWAVDQAIPVQVLLTKADKLKSGARQTQVLKIREASLEF-GGEVAVDAFSS 190 Query: 194 VKRKGIEVLR 203 +K G+++LR Sbjct: 191 LKGIGVDLLR 200 >gi|222151554|ref|YP_002560710.1| hypothetical protein MCCL_1307 [Macrococcus caseolyticus JCSC5402] gi|254783205|sp|B9E746|ENGB_MACCJ RecName: Full=Probable GTP-binding protein EngB gi|222120679|dbj|BAH18014.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 195 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/148 (40%), Positives = 86/148 (58%), Gaps = 9/148 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G E+A +GRSNVGKSS IN ++ RK++AR S+ PG+TQ LNFF N+ L Sbjct: 21 PDTGLKEVALAGRSNVGKSSFINTMIGRKSMARISSKPGKTQTLNFF------NIDEQL- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K + WG +I Y++ R L CV L+D RH + D+ ++ F Sbjct: 74 --VFVDVPGYGYAKVSKTERERWGKMIETYITTRDNLACVIQLVDIRHNPTEDDRLMYDF 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLE 172 L + ++ TK DK+ Q+ L+ Sbjct: 132 LKHYEIPTIVIATKEDKIPKGKIQKHLK 159 >gi|167751031|ref|ZP_02423158.1| hypothetical protein EUBSIR_02016 [Eubacterium siraeum DSM 15702] gi|167655949|gb|EDS00079.1| hypothetical protein EUBSIR_02016 [Eubacterium siraeum DSM 15702] gi|291556919|emb|CBL34036.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Eubacterium siraeum V10Sc8a] Length = 206 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 13/162 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +PK+ EIAFSGRSNVGKSSLIN ++NRK+LAR S+ PG+T +NF+ ++ Sbjct: 18 IPKSEKAEIAFSGRSNVGKSSLINKILNRKSLARVSSMPGKTVTINFY----------SV 67 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + D+PGYGYA+ K W GL+ YL++ L V+ L+D RH D + + Sbjct: 68 DNIYFADLPGYGYAKVSKSEKQRWAGLVEGYLADDRNLTLVFQLVDFRHPPTADDVMMIN 127 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 FL + + +VLTK DKLS +E + + L+ P A Sbjct: 128 FLIDNGIPFVVVLTKADKLSK---KERAARRESLMNEIPCAE 166 >gi|289166590|ref|YP_003456728.1| GTP-binding protein [Legionella longbeachae NSW150] gi|288859763|emb|CBJ13744.1| GTP-binding protein [Legionella longbeachae NSW150] Length = 202 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 101/190 (53%), Gaps = 16/190 (8%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ + LP E+AF+GRSN GKSS +N L KNLARTS PGRTQ +N F Sbjct: 12 VFLKSAARVSQLPDDSGYEVAFAGRSNAGKSSALNCLTGIKNLARTSKTPGRTQLINLFQ 71 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + A LVD+PGYGYA+ + W + YL R +L+ + LL+D RH Sbjct: 72 LDE---------AHRLVDLPGYGYAKVALRVKMDWQENLAHYLEVRKSLKGLILLMDIRH 122 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT- 191 +K +D + + + + I+LTK DKLS + + T+ K +R Y +I Sbjct: 123 PLKDLDVMMVDWALDRGLPVHILLTKSDKLSRSEIKNTVSK----VRKYYELAQHLITVQ 178 Query: 192 --SSVKRKGI 199 SS+K+ GI Sbjct: 179 SFSSLKKDGI 188 >gi|224089064|ref|XP_002308620.1| predicted protein [Populus trichocarpa] gi|222854596|gb|EEE92143.1| predicted protein [Populus trichocarpa] Length = 311 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/193 (38%), Positives = 98/193 (50%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 124 PSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFKVND--------- 174 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA AP++ W Y RSTL V+LLID K+ID + S+ Sbjct: 175 SWYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASW 234 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + V + TK DK +E + + + LIR + P I TS V +G Sbjct: 235 LGQNQVPMTFIFTKCDKRKKKRNGGKRPEENVNEFQELIRGFFETAPPWIMTSGVTNQGR 294 Query: 200 EVLRKAILETINY 212 + + + + NY Sbjct: 295 DEMLLHMAQLRNY 307 >gi|19705309|ref|NP_602804.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|254302269|ref|ZP_04969627.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|24418375|sp|Q8RHK1|ENGB_FUSNN RecName: Full=Probable GTP-binding protein EngB gi|19713278|gb|AAL94103.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|148322461|gb|EDK87711.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 194 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 23/207 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F KSA ++ + PE + E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 8 FVKSA-VYEKDYPE-----QLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++ Sbjct: 62 LINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFV 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTA 184 L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ KT+ + N Sbjct: 112 LLDIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDN---- 167 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETIN 211 +V SS+ KG + + + E +N Sbjct: 168 -EDVFFHSSLTNKGRDEILNFMEEKLN 193 >gi|296110625|ref|YP_003621006.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154] gi|295832156|gb|ADG40037.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154] Length = 194 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/139 (44%), Positives = 82/139 (58%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA GRSNVGKSSL N L+ RKN ARTS+ PG+TQ LNF+ +D Sbjct: 19 PTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTLNFYNVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + +G +I Y++ R LR V L+D RH D ++ + Sbjct: 70 KLYFVDVPGYGYAKVSKKQREEFGRMIEEYITSRKQLRGVVSLVDARHEPSDDDVSMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L + +V TK DK+S Sbjct: 130 LHFYNIPILVVATKSDKIS 148 >gi|225009952|ref|ZP_03700424.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C] gi|225005431|gb|EEG43381.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C] Length = 160 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 89/151 (58%), Gaps = 9/151 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + PK PE AF GRSNVGKSSLIN+L ++K+LA+TS PG+TQ +N F Sbjct: 8 FVMSNAHVEKCPKDPIPEYAFIGRSNVGKSSLINMLTSKKSLAKTSGRPGKTQLINHF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N LVD+PGYGYAR K++ ++ I Y +R+ L C ++L+D RH Sbjct: 66 ----KINQNW---FLVDLPGYGYARVSKRDKKTFQKYITEYFLKRTQLVCAFVLVDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 + +D D ++ + + + I+ TK DKL P Sbjct: 119 PQPVDLDFMRWMGENEIPFCIIFTKADKLKP 149 >gi|332882335|ref|ZP_08449963.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679719|gb|EGJ52688.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 230 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 105/199 (52%), Gaps = 12/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ +G P PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F Sbjct: 40 FVISNSSVGKCPSTHAPEYAFIGRSNVGKSSLINMLTNNKKLAKTSATPGKTLLINHF-- 97 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L NN LVD+PGYGYA+ KK + +I Y+ R + +++L+D RH Sbjct: 98 -----LINN--EWYLVDLPGYGYAKISKKEQEKLQQIISSYILCREQMTNLFVLVDSRHE 150 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 ++ID + +L + + + IV TK DK PT + ++ K L + P I +S Sbjct: 151 PQKIDMEFIEWLGENGIPFSIVFTKADKSKPTKLKANIDAYLKALKEQWEELPPYFITSS 210 Query: 193 SVKRKGIEVLRKAILETIN 211 K E+L +E+IN Sbjct: 211 ENKTGRTELLN--YIESIN 227 >gi|315645734|ref|ZP_07898858.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus vortex V453] gi|315279212|gb|EFU42522.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus vortex V453] Length = 214 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 96/168 (57%), Gaps = 11/168 (6%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 TK+ ++ VP P+ PEIA +GRSNVGKSSLIN ++ RKNLARTS+ PG+TQ Sbjct: 4 TKADFVISAVVP--AQYPEDALPEIALAGRSNVGKSSLINRMIARKNLARTSSTPGKTQQ 61 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LN++ D + LVD PGYGYA+ K ++G +I RYL R L+ V L+ Sbjct: 62 LNYYRVND---------DLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLNREELKLVLLI 112 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +D RH + D ++ +L +V TK DK+ T Q+ ++ K Sbjct: 113 VDMRHPPSKDDISMYEWLQHYNRPVCVVATKADKIPKTRRQKHVKIVK 160 >gi|312795810|ref|YP_004028732.1| GTP-binding protein YihA [Burkholderia rhizoxinica HKI 454] gi|312167585|emb|CBW74588.1| GTP-binding protein YihA [Burkholderia rhizoxinica HKI 454] Length = 251 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 89/173 (51%), Gaps = 9/173 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV- 72 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 38 FFTTVNHLRDLPATIQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFAI 97 Query: 73 -PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 P D P LVD+PGYGYA P W L+ YL+ R +R + L++D R Sbjct: 98 GPAD-------APVAHLVDLPGYGYAEVPGAAKAHWEALLSTYLTTRPQIRGLILMMDSR 150 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 ++D+ + + A ++LTK DKL+ + L + Y A Sbjct: 151 RPFTELDRRMVEWFGATARPIHVLLTKCDKLTRQESTNALRAAQKAATAYQAA 203 >gi|223044083|ref|ZP_03614122.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus capitis SK14] gi|222442477|gb|EEE48583.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus capitis SK14] Length = 195 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 11/171 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNFF N Sbjct: 21 PETNLSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFF---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I YL++R LR V L+D RH + D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKVQREKFGKMIEEYLTQRENLRLVIQLVDLRHNPTEDDVLMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 L + ++ TK DK++ Q+ L+ K + P +I SS+K Sbjct: 132 LKHFDIPTLVICTKEDKIAKGKVQKHLKNIKDKLELEP--EDSIISYSSIK 180 >gi|70726255|ref|YP_253169.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus haemolyticus JCSC1435] gi|119369266|sp|Q4L712|ENGB_STAHJ RecName: Full=Probable GTP-binding protein EngB gi|68446979|dbj|BAE04563.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 195 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 89/151 (58%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G E+A SGRSNVGKSS IN ++ RKN+ARTS PG+TQ LNFF D Sbjct: 21 PDTGLSEVALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I YL++R +L+ V L+D RH + D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKSQREKFGKMIEEYLTKRESLKLVIQLVDLRHNPTEDDVLMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK++ Q+ ++ K Sbjct: 132 LKHFDIPTLVICTKEDKIAKGKIQKHIKNIK 162 >gi|260549847|ref|ZP_05824063.1| GTPase [Acinetobacter sp. RUH2624] gi|260407097|gb|EEX00574.1| GTPase [Acinetobacter sp. RUH2624] Length = 258 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 8/166 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNKKQLARASKKPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++ D + + + + I+LTK DKL+ A + L + K ++ Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLK 203 >gi|22537458|ref|NP_688309.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus agalactiae 2603V/R] gi|76787685|ref|YP_329952.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus agalactiae A909] gi|76798601|ref|ZP_00780829.1| GTP-binding protein [Streptococcus agalactiae 18RS21] gi|77406717|ref|ZP_00783756.1| GTP-binding protein [Streptococcus agalactiae H36B] gi|77409175|ref|ZP_00785887.1| GTP-binding protein [Streptococcus agalactiae COH1] gi|77411147|ref|ZP_00787499.1| GTP-binding protein [Streptococcus agalactiae CJB111] gi|77414086|ref|ZP_00790255.1| GTP-binding protein [Streptococcus agalactiae 515] gi|81845418|sp|Q8DZ11|ENGB_STRA5 RecName: Full=Probable GTP-binding protein EngB gi|119369268|sp|Q3K0K1|ENGB_STRA1 RecName: Full=Probable GTP-binding protein EngB gi|22534336|gb|AAN00182.1|AE014252_5 GTP-binding protein [Streptococcus agalactiae 2603V/R] gi|76562742|gb|ABA45326.1| GTP-binding protein [Streptococcus agalactiae A909] gi|76586035|gb|EAO62565.1| GTP-binding protein [Streptococcus agalactiae 18RS21] gi|77159884|gb|EAO71026.1| GTP-binding protein [Streptococcus agalactiae 515] gi|77162765|gb|EAO73724.1| GTP-binding protein [Streptococcus agalactiae CJB111] gi|77172221|gb|EAO75378.1| GTP-binding protein [Streptococcus agalactiae COH1] gi|77174680|gb|EAO77510.1| GTP-binding protein [Streptococcus agalactiae H36B] gi|319745298|gb|EFV97616.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus agalactiae ATCC 13813] Length = 198 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/138 (45%), Positives = 79/138 (57%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ D Sbjct: 24 PQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNIDD--------- 74 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K WG +I YL R LR V L+D RH D ++ F Sbjct: 75 KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDNLRVVVSLVDFRHDPSADDIQMYEF 134 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + IV TK DK+ Sbjct: 135 LKYYEIPVIIVATKADKI 152 >gi|260891335|ref|ZP_05902598.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia hofstadii F0254] gi|260858718|gb|EEX73218.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia hofstadii F0254] Length = 196 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 82/211 (38%), Positives = 112/211 (53%), Gaps = 21/211 (9%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S + F KSA + + PE E +F GRSNVGKSSLIN L RKNLARTS Sbjct: 3 ISKSEFVKSA-VVEKDYPEFN-----NTVEFSFIGRSNVGKSSLINSLTKRKNLARTSKT 56 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL-SERST 120 PGRTQ +N+F L NN + VD+PGYG+A+ P+ +WG I YL S R Sbjct: 57 PGRTQLINYF-------LINN--KIHFVDLPGYGFAKVPEAVKRNWGKTIESYLVSNRE- 106 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + V+LL+D R D ++ +L+ + Y I+ TK DKLS E ++ K + + Sbjct: 107 -KVVFLLLDLRRVPSNEDMEMLKWLEHFEIEYYIIFTKADKLS---NNEKFKQLKEIRKK 162 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + +V SS+K G + L I E IN Sbjct: 163 LVFKNEDVFFYSSLKNTGRKELLDFIEERIN 193 >gi|282858564|ref|ZP_06267735.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bivia JCVIHMP010] gi|282588689|gb|EFB93823.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bivia JCVIHMP010] Length = 201 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/199 (38%), Positives = 106/199 (53%), Gaps = 12/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + P+ PE AF GRSNVGKSSLIN+L N K LA+TS+ PG+T +N F+ Sbjct: 8 FTISAPTVSKCPEDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ K +I +Y+ +R L V++LID RH Sbjct: 68 N---------KEWYLVDLPGYGYAKNSKSVRAKLEQMIAQYILQRKQLMNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPTS 192 + ID++ +L K V + I+ TK DKL+ A+ L K L + P I TS Sbjct: 119 QQTIDREFIDWLGKSNVPFSIIFTKADKLTAGRAKSNALLWMKKLEDTWEELPPYFI-TS 177 Query: 193 SVKRKGIEVLRKAILETIN 211 + K+ G E + I E+IN Sbjct: 178 AEKKTGKEEVLDYI-ESIN 195 >gi|188532190|ref|YP_001905987.1| Probable GTP-binding protein EngB [Erwinia tasmaniensis Et1/99] gi|188027232|emb|CAO95071.1| Probable GTP-binding protein EngB [Erwinia tasmaniensis Et1/99] Length = 218 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 20 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFQV 79 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 80 AE---------GYRLVDLPGYGYAEVPEETKLKWQRSLAEYLHDRHCLKGLVVLMDIRHP 130 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D+ + + + ++LTK DKL+ + L + + + EV SS Sbjct: 131 LKELDRQMILWAVQSGREVLVLLTKADKLASGARKAQLNAVREEAKTF-LGTVEVELFSS 189 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ L + + Sbjct: 190 LKKIGVDKLSQKL 202 >gi|293610817|ref|ZP_06693117.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827161|gb|EFF85526.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123612|gb|ADY83135.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2] Length = 258 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 8/166 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNKKQLARASKKPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++ D + + + + I+LTK DKL+ A + L + K ++ Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLK 203 >gi|213158842|ref|YP_002320840.1| GTP-binding [Acinetobacter baumannii AB0057] gi|213058002|gb|ACJ42904.1| GTP-binding [Acinetobacter baumannii AB0057] Length = 224 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 102/189 (53%), Gaps = 9/189 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 12 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFF-- 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 70 ----SLGN--PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L + K ++ + SS Sbjct: 124 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDFS-IQLFSS 182 Query: 194 VKRKGIEVL 202 + + G+E L Sbjct: 183 LNKLGLEEL 191 >gi|148826267|ref|YP_001291020.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae PittEE] gi|260581832|ref|ZP_05849628.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae NT127] gi|166225958|sp|A5UCY6|ENGB_HAEIE RecName: Full=Probable GTP-binding protein EngB gi|148716427|gb|ABQ98637.1| GTP-binding protein [Haemophilus influenzae PittEE] gi|260095025|gb|EEW78917.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae NT127] gi|309973414|gb|ADO96615.1| GTP-binding protein YihA [Haemophilus influenzae R2846] Length = 205 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PNYKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLSGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSADLPILLLLTKADKLSQSA 156 >gi|313891565|ref|ZP_07825175.1| ribosome biogenesis GTP-binding protein YsxC [Dialister microaerophilus UPII 345-E] gi|313120024|gb|EFR43206.1| ribosome biogenesis GTP-binding protein YsxC [Dialister microaerophilus UPII 345-E] Length = 213 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/187 (39%), Positives = 102/187 (54%), Gaps = 15/187 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--PKDFSNLKNNLPAMAL 88 EIAF GRSNVGKSSLIN L K LAR S PG+T+ +N++ + N K L Sbjct: 34 EIAFIGRSNVGKSSLINSLCGNKKLARVSREPGKTRTINYYAVQSRKAINEKEERQDWYL 93 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYG+A+ +KN D W I Y+ + L + LL+D RH +D + +L Sbjct: 94 VDLPGYGFAKTSQKNKDMWSSFISDYIYKSEKLILICLLVDLRHPGLAMDMKAYEWLVNS 153 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTK--YLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V QI+ TK DKL ++ L + K + ++N P A+ SS+K +G RK + Sbjct: 154 GVDVQIIATKADKLGNNEKRKNLAQVKKIFQLKNPPIAY------SSLKNEG----RKEL 203 Query: 207 LETI-NY 212 LE I NY Sbjct: 204 LELIENY 210 >gi|302874449|ref|YP_003843082.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium cellulovorans 743B] gi|307690944|ref|ZP_07633390.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium cellulovorans 743B] gi|302577306|gb|ADL51318.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium cellulovorans 743B] Length = 201 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/139 (46%), Positives = 83/139 (59%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+AF GRSNVGKSSLIN L NRK L + S PG+T+ +NFF+ NN+ Sbjct: 19 PQDDIPEVAFVGRSNVGKSSLINTLTNRKKLVKVSQTPGKTRLVNFFII-------NNV- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ K DSWG I YL R L+ V LL+D R + D ++ + Sbjct: 71 -MHFVDLPGYGYAKVSKNERDSWGKTIETYLHNRPQLKKVILLLDSRRVPNEDDILMYDW 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 + IVLTK+DKL+ Sbjct: 130 ILHYGYEAVIVLTKVDKLT 148 >gi|145633154|ref|ZP_01788886.1| GTP-binding protein [Haemophilus influenzae 3655] gi|145635886|ref|ZP_01791575.1| GTP-binding protein [Haemophilus influenzae PittAA] gi|229843849|ref|ZP_04463990.1| GTPase EngB [Haemophilus influenzae 6P18H1] gi|229846150|ref|ZP_04466262.1| GTPase EngB [Haemophilus influenzae 7P49H1] gi|144986380|gb|EDJ92959.1| GTP-binding protein [Haemophilus influenzae 3655] gi|145266869|gb|EDK06884.1| GTP-binding protein [Haemophilus influenzae PittAA] gi|229811154|gb|EEP46871.1| GTPase EngB [Haemophilus influenzae 7P49H1] gi|229812843|gb|EEP48531.1| GTPase EngB [Haemophilus influenzae 6P18H1] Length = 205 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSANLPVLLLLTKADKLSQSA 156 >gi|154249103|ref|YP_001409928.1| ribosome biogenesis GTP-binding protein YsxC [Fervidobacterium nodosum Rt17-B1] gi|154153039|gb|ABS60271.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1] Length = 201 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 19/186 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E AF GRSNVGKSSL+N LV +K +A S PG+T +N+F+ + VD Sbjct: 31 EYAFVGRSNVGKSSLLNALVGKK-VAFVSKNPGKTSTINYFLIDN---------RFYFVD 80 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 +PGYGYA+ KK+ + W +I RY SERS ++ ++ LID RH + + D+ + + Sbjct: 81 LPGYGYAKTSKKDRELWRKVIERYFSERSWNMKVMFSLIDSRHELMESDEQLLEWTQILG 140 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKY---LIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V ++LTKIDKL+ + E L++ KY ++++Y +IP SS+ ++G++ + I Sbjct: 141 VKPVVLLTKIDKLN---SSERLKQIKYFENILKSYGIER--IIPCSSLTKEGLDEVWNVI 195 Query: 207 LETINY 212 ET NY Sbjct: 196 FETQNY 201 >gi|308188688|ref|YP_003932819.1| GTP-binding protein engB [Pantoea vagans C9-1] gi|308059198|gb|ADO11370.1| Probable GTP-binding protein engB [Pantoea vagans C9-1] Length = 211 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K+ LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 KE---------GKRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+ + + + + ++LTK DKL+ + L + + +V SS Sbjct: 122 LKDLDRQMIQWSVESGIPVLLLLTKADKLASGARKAQLNVVREAALEF-VGDVQVELFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ +R+ + Sbjct: 181 LKKIGVDKVRQKL 193 >gi|301169860|emb|CBW29464.1| GTP-binding protein [Haemophilus influenzae 10810] Length = 205 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 9/152 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSANLPVLLLLTKADKLSQS 155 >gi|300725096|ref|YP_003714424.1| putative GTPase [Xenorhabdus nematophila ATCC 19061] gi|297631641|emb|CBJ92354.1| putative GTPase with nucleoside triP hydrolase domain, involved in coordination of cell cycle [Xenorhabdus nematophila ATCC 19061] Length = 200 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 4 FVTSAPDIRHLPQDVGIEVAFAGRSNAGKSSALNALTRQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D + LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 64 ED---------GIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRECLLGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + V ++LTK DKL+ + L K + + +V SS Sbjct: 115 LKDLDMQMIEWAVVMQVPVMVLLTKADKLASGARKSQLAKVREELAKL-DGDVQVEYFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ GI+ L + + Sbjct: 174 LKKLGIDKLEQKL 186 >gi|227500205|ref|ZP_03930274.1| GTPase [Anaerococcus tetradius ATCC 35098] gi|227217727|gb|EEI83031.1| GTPase [Anaerococcus tetradius ATCC 35098] Length = 195 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/148 (39%), Positives = 86/148 (58%), Gaps = 9/148 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA GRSNVGKSS IN + RK LA+TS+ PG+T+ +NF+ D Sbjct: 19 PGEDLPEIALVGRSNVGKSSFINSFLGRKKLAKTSSKPGKTRTINFYRIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K D W LI YL +R +LR V+L++D RH +D ++ + Sbjct: 70 KFRLVDLPGYGYAKVSKAEKDKWDKLINEYLHQRESLREVFLIVDIRHEPTTLDCQMYKW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLE 172 + + + ++ TK DK+ + Q+ ++ Sbjct: 130 IRESGFTGFVIATKFDKIKKSQIQKNIK 157 >gi|310657904|ref|YP_003935625.1| GTP-binding protein [Clostridium sticklandii DSM 519] gi|308824682|emb|CBH20720.1| GTP-binding protein [Clostridium sticklandii] Length = 202 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 16/176 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P PE+AF GRSNVGKSS IN L+NR++LAR S PG+T+ +NF+ + ++F Sbjct: 19 PHDELPEVAFVGRSNVGKSSAINTLLNRRSLARVSQNPGKTRTINFYKINEEF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ K WG ++ Y LR ++LL+D RH K+ D ++ Sbjct: 72 ---YFVDLPGYGYAKTAKTERQHWGTVMQEYFENSQDLRHIFLLLDIRHEPKEDDILMYK 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVKRKG 198 + AV Y I +T I S ++ +KT ++R H E ++P SS+K+ G Sbjct: 129 Y----AVHYNIPVTIIATKSDKISRGAFQKTFSMMRKKLDYHGEKILPISSLKKTG 180 >gi|16273043|ref|NP_439275.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae Rd KW20] gi|145630217|ref|ZP_01785999.1| GTP-binding protein [Haemophilus influenzae R3021] gi|148828278|ref|YP_001293031.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae PittGG] gi|260580203|ref|ZP_05848033.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae RdAW] gi|1176322|sp|P46453|ENGB_HAEIN RecName: Full=Probable GTP-binding protein EngB gi|166225959|sp|A5UIP2|ENGB_HAEIG RecName: Full=Probable GTP-binding protein EngB gi|1574673|gb|AAC22772.1| conserved hypothetical GTP-binding protein [Haemophilus influenzae Rd KW20] gi|144984498|gb|EDJ91921.1| GTP-binding protein [Haemophilus influenzae R3021] gi|148719520|gb|ABR00648.1| GTP-binding protein [Haemophilus influenzae PittGG] gi|260093487|gb|EEW77420.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae RdAW] Length = 205 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSANLPVLLLLTKADKLSQSA 156 >gi|309805713|ref|ZP_07699753.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 09V1-c] gi|329921292|ref|ZP_08277730.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners SPIN 1401G] gi|308164966|gb|EFO67209.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 09V1-c] gi|328934584|gb|EGG31088.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners SPIN 1401G] Length = 195 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 10/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA SGRSNVGKSSLIN ++NR+NLARTS PG+TQ LNF++ Sbjct: 19 PQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTLNFYLVN---------T 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K+ +G +I YL R+ L+ + LL+D RH D ++F++ Sbjct: 70 DLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTVDDINMFNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + +V TKIDKL + + LE L + + +P SS + I+ + Sbjct: 130 ALCLNIPILVVATKIDKLKKSAIGQ-LESKIGLSLDLTQSQVTFLPFSSETKINIDKFWQ 188 Query: 205 AILETI 210 I +I Sbjct: 189 WIENSI 194 >gi|290477053|ref|YP_003469965.1| putative GTPase with nucleoside triP hydrolase domain, involved in coordination of cell cycle [Xenorhabdus bovienii SS-2004] gi|289176398|emb|CBJ83205.1| putative GTPase with nucleoside triP hydrolase domain, involved in coordination of cell cycle [Xenorhabdus bovienii SS-2004] Length = 207 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPQDVGIEVAFAGRSNAGKSSALNALTKQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D + LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 ED---------GIRLVDLPGYGYAEVPEEMKRKWQNALGEYLQKRECLLGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + V ++LTK DKL+ + L K + + + ++ S+ Sbjct: 124 LKDLDMQMIEWAVVMQVPVMVLLTKADKLASGARKSQLAKVRQELTSL-GGEIQIENFSA 182 Query: 194 VKRKGIEVLRKAI 206 +K+ GI+ L + + Sbjct: 183 LKKIGIDQLEQKL 195 >gi|145636430|ref|ZP_01792098.1| GTP-binding protein [Haemophilus influenzae PittHH] gi|145270255|gb|EDK10190.1| GTP-binding protein [Haemophilus influenzae PittHH] Length = 205 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSADLPVLLLLTKADKLSQSA 156 >gi|68249669|ref|YP_248781.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae 86-028NP] gi|81335901|sp|Q4QLH6|ENGB_HAEI8 RecName: Full=Probable GTP-binding protein EngB gi|68057868|gb|AAX88121.1| probable GTP-binding protein EngB [Haemophilus influenzae 86-028NP] Length = 205 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSANLPVLLLLTKADKLSQSA 156 >gi|319897413|ref|YP_004135610.1| gtp-binding protein [Haemophilus influenzae F3031] gi|309751235|gb|ADO81219.1| GTP-binding protein YihA [Haemophilus influenzae R2866] gi|317432919|emb|CBY81285.1| GTP-binding protein [Haemophilus influenzae F3031] Length = 205 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSANLPILLLLTKADKLSQSA 156 >gi|254497291|ref|ZP_05110099.1| GTPase EngB [Legionella drancourtii LLAP12] gi|254353519|gb|EET12246.1| GTPase EngB [Legionella drancourtii LLAP12] Length = 203 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 14/192 (7%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ ++ LP+ E+AF+GRSN GKSS +N L K LARTS PGRTQ +N F Sbjct: 10 VFLKSAAKVVHLPEDSGYEVAFAGRSNAGKSSALNCLTGIKGLARTSKTPGRTQLINLFS 69 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D L VD+PGYGYA+ + W + YL R +L+ + LL+D RH Sbjct: 70 LDDEHRL---------VDLPGYGYAKVALQVKMEWQKHLAHYLDIRKSLKGLVLLMDIRH 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIP 190 +K +DQ + + + + I+LTK DKLS + + T+ K + ++Y A V Sbjct: 121 PLKDLDQMMIDWALNRELPVHILLTKADKLSRSEVKNTVLKVR---KHYGLAEHLVSVQS 177 Query: 191 TSSVKRKGIEVL 202 SS K++G+ L Sbjct: 178 FSSSKKEGVAEL 189 >gi|148653688|ref|YP_001280781.1| HSR1-like GTP-binding protein [Psychrobacter sp. PRwf-1] gi|148572772|gb|ABQ94831.1| cell division checkpoint GTPase YihA [Psychrobacter sp. PRwf-1] Length = 232 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 102/193 (52%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P L P E+AF+GRSN GKSS IN+L N++ LAR+S PGRTQ +NFF Sbjct: 38 FLMSAPTFKLCPPDTGYEVAFAGRSNAGKSSAINVLTNQRQLARSSKTPGRTQMINFFT- 96 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N LVD+PGYGYA P+K W + YL R +L + LL+D RH Sbjct: 97 -----IGNE--EARLVDLPGYGYAAVPEKMKLVWQTELEEYLVSRESLAGLVLLMDSRHP 149 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + ++LTK DK A+ L +TK + + SS Sbjct: 150 LKFFDEQMLRWAKDGELPVHVLLTKADKFKYGPAKNILLQTKRELEKLDLPF-SIQLFSS 208 Query: 194 VKRKGIEVLRKAI 206 +K++GI+ L + + Sbjct: 209 LKKEGIDELSEVM 221 >gi|34762743|ref|ZP_00143732.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887593|gb|EAA24673.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 194 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 23/207 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F KSA ++ + PE + E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 8 FVKSA-VYEKDYPE-----QLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++ Sbjct: 62 LINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFV 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTA 184 L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ KT+ + N Sbjct: 112 LLDIRRVPSDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDN---- 167 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETIN 211 +V SS+ KG + + + E +N Sbjct: 168 -EDVFFHSSLTNKGRDEILNFMEEKLN 193 >gi|254508264|ref|ZP_05120387.1| GTP-binding protein [Vibrio parahaemolyticus 16] gi|219548781|gb|EED25783.1| GTP-binding protein [Vibrio parahaemolyticus 16] Length = 225 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRALPADEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 76 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQSLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 127 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGF-GGDVSVAAFSS 185 Query: 194 VKRKGIEVLRKAILE 208 +K G++ LR + E Sbjct: 186 LKGIGVDTLRNKLDE 200 >gi|239637529|ref|ZP_04678501.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus warneri L37603] gi|239596747|gb|EEQ79272.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus warneri L37603] Length = 195 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A SGRSNVGKSS IN ++ RKN+ARTS PG+TQ LNFF D Sbjct: 21 PETDVPEVALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I YL+ R L+ V L+D RH + D ++++ Sbjct: 72 QLVFVDVPGYGYAKVSKVQREKFGKMIEEYLTTRQKLQLVIQLVDLRHNPTEDDVLMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + I+ TK DK+ Q+ L K Sbjct: 132 LKHFDIPTLIICTKEDKIPKGKVQKHLNNIK 162 >gi|299822780|ref|ZP_07054666.1| ribosome biogenesis GTP-binding protein YsxC [Listeria grayi DSM 20601] gi|299816309|gb|EFI83547.1| ribosome biogenesis GTP-binding protein YsxC [Listeria grayi DSM 20601] Length = 195 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 59/138 (42%), Positives = 85/138 (61%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE A +GRSNVGKSS IN ++ RK++AR S+ PG+TQ LNF+ N+++ L Sbjct: 19 PEGGLPEFALAGRSNVGKSSFINTMIGRKSMARISSKPGKTQTLNFY------NIEDTL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYG+A+ KK + WG +I Y++ R LR V +ID RH + D ++ F Sbjct: 72 --FFVDVPGYGFAKVSKKEREKWGEMIETYITSREPLRAVVQIIDLRHKPTKDDVMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + I+ TK DK+ Sbjct: 130 LKYYDIPVIIIATKADKI 147 >gi|299768659|ref|YP_003730685.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter sp. DR1] gi|298698747|gb|ADI89312.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter sp. DR1] Length = 258 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 8/166 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPEDMKKVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++ D + + + + I+LTK DKL+ A + L + K ++ Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLK 203 >gi|317051090|ref|YP_004112206.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurispirillum indicum S5] gi|316946174|gb|ADU65650.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurispirillum indicum S5] Length = 204 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 99/193 (51%), Gaps = 13/193 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P + P PEI F GRSNVGKSSLIN + R+N+A TS PGRT+ +N+F Sbjct: 12 FITSAPSLAKCPVPDRPEIVFLGRSNVGKSSLINAVTGRRNIAITSKTPGRTRLINYF-- 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +L VD+PGYG+AR P D W + YL R + +++D RH Sbjct: 70 ----DVNGDL---YCVDLPGYGFARVPTGMRDEWNRSLYEYLERRENIALAIMIVDARHE 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D +FS L + V IV TK DKL+ Q+ + K + V+P SS Sbjct: 123 AQKNDLRMFSLLQELEVPVFIVATKADKLTKNQLQKQVAGLKKVY----GKEAGVLPFSS 178 Query: 194 VKRKGIEVLRKAI 206 + GIE + I Sbjct: 179 TAKYGIEEFWQEI 191 >gi|257439111|ref|ZP_05614866.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium prausnitzii A2-165] gi|257198489|gb|EEU96773.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium prausnitzii A2-165] Length = 203 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 14/204 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + K+ +I G+ LP++ PE++FSGRSNVGKSSLIN L NRKNLAR S+ PG+T Sbjct: 3 YNKADFIASYGIS--SQLPESDRPELSFSGRSNVGKSSLINKLCNRKNLARVSSTPGKTA 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ + VD+PGYGYA+ + + W LI Y + Sbjct: 61 TINFY----------EVDNCYFVDLPGYGYAKVSNADRERWDDLINSYFEAPRHHTLLVQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LIDCRH D + +L + + + LTK DKL + +T E + + P Sbjct: 111 LIDCRHAPSADDLQMLKYLHYHQIPFVVALTKADKLKKSQLAKTQEDFEKVC--LPYGCQ 168 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 +V+ TS GI L+ + E + Sbjct: 169 KVVLTSGENGYGIPELQAVLNEAV 192 >gi|218290818|ref|ZP_03494887.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1] gi|218239176|gb|EED06377.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1] Length = 220 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/178 (39%), Positives = 100/178 (56%), Gaps = 13/178 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE AF GRSNVGKS+L+N L+NRK LAR S+ PG+T+ +NF+ L N Sbjct: 19 PKTMLPEFAFLGRSNVGKSTLLNRLLNRKQLARVSSQPGKTRQINFY-------LINQ-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA K+ + +I RYL++R LR ++ LID RH + D V + Sbjct: 70 SFRFVDLPGYGYAAVSKQERQRFAAMIDRYLNDRECLRRIFHLIDIRHEPTKDDVAVHAA 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + V +V TK DK+ + + K +IR ++ P S+ KR G+E L Sbjct: 130 LLELGVPVSVVATKADKI----GRSHVPKHVKVIRETLRTPVDIWPVSAEKRTGLEAL 183 >gi|330684286|gb|EGG96024.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis VCU121] Length = 195 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A SGRSNVGKSS IN ++ RKN+ARTS PG+TQ LNFF D Sbjct: 21 PETDVPEVALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFFNIDD--------- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I YL+ R L+ V L+D RH + D ++++ Sbjct: 72 QLVFVDVPGYGYAKVSKVQREKFGKMIEEYLTTRQKLQLVIQLVDLRHNPTEDDVLMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + I+ TK DK+ Q+ L K Sbjct: 132 LKHFDIPTLIICTKEDKIPKGKVQKHLNNIK 162 >gi|189485033|ref|YP_001955974.1| putative GTP-binding protein EngB [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170286992|dbj|BAG13513.1| putative GTP-binding protein EngB [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 193 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 111/199 (55%), Gaps = 12/199 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F R E LPK+ EI FSGRSNVGKSS+IN L ++KNLAR S PGRT+ +N + Sbjct: 6 VFFRATAEADSLPKS-VAEIIFSGRSNVGKSSVINALCSQKNLARISKTPGRTRSINVYS 64 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +L+ +VD+PGYG+AR + W ++ + +R++ + VY++ID Sbjct: 65 V----SLRK-----WIVDLPGYGFARVSLQEKKLWNKMMEECIIKRNSNKTVYIVIDAFV 115 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 G ++D D+ +L + +S++I+ K DK+ T +++ ++ + T P V S Sbjct: 116 GPTELDFDMTKWLKEYNISFKIIANKCDKVPQTISEDEIQSK--AAECFGTDKPNVFTVS 173 Query: 193 SVKRKGIEVLRKAILETIN 211 + KR G L+ IL+ N Sbjct: 174 AKKRNGFNKLKTDILKFFN 192 >gi|262280231|ref|ZP_06058015.1| GTPase [Acinetobacter calcoaceticus RUH2202] gi|262258009|gb|EEY76743.1| GTPase [Acinetobacter calcoaceticus RUH2202] Length = 258 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 8/166 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRQSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++ D + + + + I+LTK DKL+ A + L + K ++ Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLK 203 >gi|169794587|ref|YP_001712380.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii AYE] gi|215482176|ref|YP_002324358.1| hypothetical protein ABBFA_000425 [Acinetobacter baumannii AB307-0294] gi|301345003|ref|ZP_07225744.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii AB056] gi|301512066|ref|ZP_07237303.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii AB058] gi|301596097|ref|ZP_07241105.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii AB059] gi|332853132|ref|ZP_08434569.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6013150] gi|332868622|ref|ZP_08438278.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6013113] gi|169147514|emb|CAM85375.1| putative GTPase, involved in coordination of cell cycle (EngB) [Acinetobacter baumannii AYE] gi|213986877|gb|ACJ57176.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|332728801|gb|EGJ60160.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6013150] gi|332733299|gb|EGJ64493.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6013113] Length = 258 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 8/166 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++ D + + + + I+LTK DKL+ A + L + K ++ Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLK 203 >gi|241664501|ref|YP_002982861.1| ribosome biogenesis GTP-binding protein YsxC [Ralstonia pickettii 12D] gi|240866528|gb|ACS64189.1| GTP-binding protein HSR1-related [Ralstonia pickettii 12D] Length = 233 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 8/188 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F K Sbjct: 19 LPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSKTPGRTQHINYF---SVMPAKAED 75 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA AP + W L+ Y+ R L + +++D R +D + Sbjct: 76 PLGFLVDLPGYGYAEAPGETKSHWVHLLGDYVQARQQLAGLVIMMDARRPFTDLDCQMVE 135 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPT----SSVKRKG 198 + ++LTK DKL+ A L + ++ +Y +V T SS+KR+G Sbjct: 136 WFLPTGKPIHVLLTKADKLTNNDASRALMAARKVLADYRAQIDGDVSLTVQLFSSLKRRG 195 Query: 199 IEVLRKAI 206 IE ++ + Sbjct: 196 IEEAQRIV 203 >gi|300811980|ref|ZP_07092437.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123480|ref|YP_004033739.1| GTP-binding protein engb [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300497041|gb|EFK32106.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312280043|gb|ADQ60762.1| Probable GTP-binding protein engB [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684389|gb|EGD26558.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 200 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/185 (37%), Positives = 105/185 (56%), Gaps = 13/185 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G EIA +GRSNVGKSS IN L+ RKNLARTS++PG+TQ LNF+ + ++ Sbjct: 19 PEGGLDEIALAGRSNVGKSSFINTLLQRKNLARTSSSPGKTQTLNFY------RVDSDQA 72 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK + +G +I YL R+ L+ + LLID RH D ++ + Sbjct: 73 DFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILLIDGRHEPTADDIAMYDY 132 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE---VIPTSSVKRKGIEV 201 + +V TK+DK+ + KT+ R + + + +P SSV + ++ Sbjct: 133 AQYLNLPILLVATKMDKIK----KNAFNKTEAAFRKHLNLNKDNVTFLPFSSVTKLNVDQ 188 Query: 202 LRKAI 206 ++ I Sbjct: 189 VKDWI 193 >gi|319776639|ref|YP_004139127.1| GTP-binding protein [Haemophilus influenzae F3047] gi|317451230|emb|CBY87463.1| GTP-binding protein [Haemophilus influenzae F3047] Length = 205 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PNYKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSANLPILLLLTKADKLSQSA 156 >gi|194689944|gb|ACF79056.1| unknown [Zea mays] gi|194693496|gb|ACF80832.1| unknown [Zea mays] gi|195626284|gb|ACG34972.1| GTP-binding protein [Zea mays] gi|223946703|gb|ACN27435.1| unknown [Zea mays] Length = 313 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/193 (40%), Positives = 101/193 (52%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 126 PRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKVND--------- 176 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA AP++ +W Y R L V+LLID K+ID D S+ Sbjct: 177 SWYLVDLPGYGYASAPQEARTNWDEFTRNYFLSRENLVSVFLLIDASIPAKKIDLDYASW 236 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + V +V TK DK +E +E + LIR Y A P I TSSV +G Sbjct: 237 LGQNKVPMTLVFTKCDKRKKKKNGGRKPEENVETFQGLIREYFEAAPPWIMTSSVTNQGR 296 Query: 200 EVLRKAILETINY 212 + + + + NY Sbjct: 297 DEILLHMSQLRNY 309 >gi|237743263|ref|ZP_04573744.1| GTP-binding protein [Fusobacterium sp. 7_1] gi|260495114|ref|ZP_05815243.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_33] gi|229433042|gb|EEO43254.1| GTP-binding protein [Fusobacterium sp. 7_1] gi|260197557|gb|EEW95075.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_33] Length = 194 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 23/207 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F KSA ++ + PE + E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 8 FIKSA-VYEKDYPE-----QLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++ Sbjct: 62 LINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFV 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTA 184 L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ KT+ + N Sbjct: 112 LLDIRRVPSDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDN---- 167 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETIN 211 +V S++ KG + + I E +N Sbjct: 168 -EDVFFHSAITNKGRDEILNFIEEKLN 193 >gi|169632344|ref|YP_001706080.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii SDF] gi|260557020|ref|ZP_05829237.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii ATCC 19606] gi|169151136|emb|CAO99805.1| putative GTPase, involved in coordination of cell cycle (EngB) [Acinetobacter baumannii] gi|193078482|gb|ABO13484.2| putative cell cycle coordination GTPase (EngB) [Acinetobacter baumannii ATCC 17978] gi|260409626|gb|EEX02927.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii ATCC 19606] Length = 258 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 8/166 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++ D + + + + I+LTK DKL+ A + L + K ++ Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLK 203 >gi|222823665|ref|YP_002575239.1| predicted ATP/GTP-binding protein [Campylobacter lari RM2100] gi|254783190|sp|B9KG03|ENGB_CAMLR RecName: Full=Probable GTP-binding protein EngB gi|222538887|gb|ACM63988.1| conserved hypothetical protein, predicted ATP/GTP-binding protein [Campylobacter lari RM2100] Length = 199 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 80/206 (38%), Positives = 114/206 (55%), Gaps = 23/206 (11%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-- 71 FL +I P+ EIAF GRSNVGKSSLIN L KNLA++S+ PG+TQ +NFF Sbjct: 7 FLISASKIDEAPQPIYTEIAFLGRSNVGKSSLINTLCKNKNLAKSSSTPGKTQLINFFEV 66 Query: 72 -VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 KD K + +D+PG+GYA+ KK W + +L ERS+++ LID Sbjct: 67 DCKKDEDKFK-----LIFIDLPGFGYAKVSKKTKAIWNKNLDEFLKERSSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDK--KAVSYQI-VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH ID ++ +LD +A +I V TK DKL+ + +K K L A+ Sbjct: 122 RHENLDIDLNLDLYLDSFIRADQKKITVFTKADKLNQS------QKAKLL-----NANKN 170 Query: 188 VIPTSSVKRKGIEVL-RKAILETINY 212 I S++K+ GI+ L +K ILE++ + Sbjct: 171 AILVSNLKKSGIDKLEQKIILESLGF 196 >gi|320167719|gb|EFW44618.1| GTPase EngB [Capsaspora owczarzaki ATCC 30864] Length = 617 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/193 (40%), Positives = 107/193 (55%), Gaps = 15/193 (7%) Query: 20 EIGL-LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 +IGL P PE A GRSNVGKSSLIN LV+ L RTS PG T+ LNFF + Sbjct: 256 DIGLHSPPEKYPEFAVIGRSNVGKSSLINALVHSTTLVRTSATPGHTKTLNFF------S 309 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + + +VD PGYGY RA ++ +D+ G + LS RST+R V LLID HG+K D Sbjct: 310 IGRRI---GVVDCPGYGY-RAQEEWMDNLGTM----LSTRSTIRQVLLLIDPMHGLKTTD 361 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +V L++ +QIV TK D++ + T+ + R P P S ++ KG Sbjct: 362 LEVMQLLEELEKPFQIVFTKSDRMDGKLDMAVMRATEIIARQTTHCMPFPFPVSVLQNKG 421 Query: 199 IEVLRKAILETIN 211 + VLR +IL ++ Sbjct: 422 LGVLRHSILRALD 434 >gi|184159605|ref|YP_001847944.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii ACICU] gi|332876090|ref|ZP_08443874.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6014059] gi|183211199|gb|ACC58597.1| predicted GTPase [Acinetobacter baumannii ACICU] gi|322509515|gb|ADX04969.1| engB [Acinetobacter baumannii 1656-2] gi|323519535|gb|ADX93916.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii TCDC-AB0715] gi|332735708|gb|EGJ66751.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6014059] Length = 258 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 8/166 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFF-- 103 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 104 ----SLGN--PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++ D + + + + I+LTK DKL+ A + L + K ++ Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLK 203 >gi|86146594|ref|ZP_01064916.1| GTP-binding protein [Vibrio sp. MED222] gi|85835651|gb|EAQ53787.1| GTP-binding protein [Vibrio sp. MED222] Length = 219 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 106/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL R +L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQRRESLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + L K + +++ V SS Sbjct: 123 MKDLDQQMIYWAIDSRIPVQVLLTKADKLKSGARKAQLLKIRNDAKSF-GGDVAVDVFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++ LR + E Sbjct: 182 MKGIGVDQLRAKMDE 196 >gi|260592424|ref|ZP_05857882.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella veroralis F0319] gi|260535660|gb|EEX18277.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella veroralis F0319] Length = 199 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 101/190 (53%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + P E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTISSPSLAKCPDDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NN LVD+PGYGYA+ K + +I +Y+ +R L V++LID RH Sbjct: 68 -------NN--EWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPTS 192 ++ID++ +L + V + I+ TK DKLSP A+ L K L + P I +S Sbjct: 119 QQKIDREFVDWLGESNVPFSIIFTKADKLSPAKAKSNALLWMKKLQDRWEVLPPYFITSS 178 Query: 193 SVKRKGIEVL 202 K EVL Sbjct: 179 EDKAGRDEVL 188 >gi|116618614|ref|YP_818985.1| GTPase EngB [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227432007|ref|ZP_03914027.1| GTPase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122271186|sp|Q03W10|ENGB_LEUMM RecName: Full=Probable GTP-binding protein EngB gi|116097461|gb|ABJ62612.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227352292|gb|EEJ42498.1| GTPase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 194 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/139 (43%), Positives = 83/139 (59%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIA GRSNVGKSSL N L+ RKN ARTS+ PG+TQ LNF+ +D Sbjct: 19 PTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTLNFYDVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K +++G +I Y++ R LR V L+D RH + D ++ + Sbjct: 70 KLYFVDVPGYGYAKVSKAQREAFGVMIEEYITSRKQLRGVISLVDARHEPSEDDISMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L + +V TK DK+S Sbjct: 130 LHYYNIPILVVATKSDKIS 148 >gi|317495275|ref|ZP_07953645.1| ribosome biogenesis GTP-binding protein YsxC [Gemella moribillum M424] gi|316914697|gb|EFV36173.1| ribosome biogenesis GTP-binding protein YsxC [Gemella moribillum M424] Length = 198 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/183 (40%), Positives = 98/183 (53%), Gaps = 13/183 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A GRSNVGKSS IN ++ RKN AR S PG+T+ LNFF D Sbjct: 22 PEHTKPEVAMCGRSNVGKSSFINTILERKNYARVSAKPGKTRTLNFFDIND--------- 72 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K + +IV Y + L V LID RH Q D ++ F Sbjct: 73 KVVLVDVPGYGYAKLSKSEKEKLYDMIVEYFTTSKNLGFVLHLIDSRHKPSQDDIEMNEF 132 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKGIEVLR 203 L+ + + +VLTKIDK+S E + T + R T VIP SSV + G + + Sbjct: 133 LNYYEIPFVVVLTKIDKIS---KNELAKNTAIIKRELDLTNSMAVIPFSSVTKLGKDKVL 189 Query: 204 KAI 206 K I Sbjct: 190 KEI 192 >gi|298369922|ref|ZP_06981238.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria sp. oral taxon 014 str. F0314] gi|298281382|gb|EFI22871.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria sp. oral taxon 014 str. F0314] Length = 215 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/196 (38%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLQDLPDT-PAEIAFVGRSNAGKSSAINTLTQHTRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LKN +VD+PGYGYA+ P+ W L+ YL RS L + L++D RH Sbjct: 66 ----ELKN---GGFMVDLPGYGYAQVPEAIRTHWIQLLGGYLQRRSQLIGLILIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K +D + F I+L+K DKLS +TL ++ Y V S Sbjct: 119 LKDLDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLASVNKSLKPYKERQRVSVQLFS 178 Query: 193 SVKRKGIEVLRKAILE 208 S+K++GIE + + + E Sbjct: 179 SLKKQGIEEVNRIVGE 194 >gi|256846927|ref|ZP_05552381.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_36A2] gi|294784268|ref|ZP_06749563.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_27] gi|256717725|gb|EEU31284.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_36A2] gi|294488134|gb|EFG35485.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_27] Length = 194 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 23/207 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F KSA ++ + PE + E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 8 FVKSA-VYEKDYPE-----QLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++ Sbjct: 62 LINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFV 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTA 184 L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ KT+ + N Sbjct: 112 LLDIRRVPSDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDN---- 167 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETIN 211 +V SS+ KG + + + E +N Sbjct: 168 -EDVFFHSSLTNKGRDEILNFMEEKLN 193 >gi|187930333|ref|YP_001900820.1| ribosome biogenesis GTP-binding protein YsxC [Ralstonia pickettii 12J] gi|238691835|sp|B2UEI8|ENGB_RALPJ RecName: Full=Probable GTP-binding protein EngB gi|187727223|gb|ACD28388.1| GTP-binding protein HSR1-related [Ralstonia pickettii 12J] Length = 233 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 8/188 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F K Sbjct: 19 LPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSKTPGRTQHINYF---SVMPAKAED 75 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA AP + W L+ Y+ R L + +++D R +D + Sbjct: 76 PLGFLVDLPGYGYAEAPGETKSHWVHLLGDYVKARQQLAGLVIMMDARRPFTDLDCQMVE 135 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPT----SSVKRKG 198 + ++LTK DKL+ A L + ++ +Y +V T SS+KR+G Sbjct: 136 WFLPTGKPIHVLLTKADKLTNNDASRALMAARKVLADYRAQIDGDVSLTVQLFSSLKRRG 195 Query: 199 IEVLRKAI 206 IE ++ + Sbjct: 196 IEEAQRIV 203 >gi|146320685|ref|YP_001200396.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus suis 98HAH33] gi|145691491|gb|ABP91996.1| Predicted GTPase [Streptococcus suis 98HAH33] Length = 206 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 102/207 (49%), Gaps = 16/207 (7%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 I T +A I L V + P PEIA +GRSNVGKSS IN L+ RKNLARTS PG+T Sbjct: 14 INTHNAEILLSAVSK-AQYPGYDIPEIALAGRSNVGKSSFINTLLGRKNLARTSGKPGKT 72 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNF+ D + VD+PG GYA+ K WG +I YL+ R LR + Sbjct: 73 QQLNFYNIDD---------KIRFVDVPGNGYAKVSKTERAKWGKMIEEYLTTRENLRVLV 123 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPT 183 L+D RH D ++ FL + IV TK DK+ E++ K K Sbjct: 124 SLVDMRHEPSADDVQMYDFLKYYEIPVIIVATKADKIPRGKWNKHESMIKKKLDF----D 179 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETI 210 + + + SS R G + AIL I Sbjct: 180 KNDQFVIFSSETRHGYDQAWDAILSNI 206 >gi|325280017|ref|YP_004252559.1| GTP-binding protein engB [Odoribacter splanchnicus DSM 20712] gi|324311826|gb|ADY32379.1| GTP-binding protein engB [Odoribacter splanchnicus DSM 20712] Length = 204 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK E AF GRSNVGKSSLIN+L N K LA+T+ PG+TQ +N F+ D Sbjct: 23 PKPDRHEYAFIGRSNVGKSSLINMLTNNKKLAKTAARPGKTQLINHFLINDM-------- 74 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +VD+PGYGYAR + + +I Y+ +R L C+++LID R ++ID + + Sbjct: 75 -WYMVDLPGYGYARTSETARRQFEKMIRDYILKRENLVCLFVLIDSRLEPQKIDLEFMEW 133 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + V + ++ TK DKLS T + ++ K ++ + T P TSS KR G R Sbjct: 134 LGENGVPFVMIFTKADKLSATQRLKCIDDYHKVMLETWETT-PMAFMTSSEKRLG----R 188 Query: 204 KAILETIN 211 + +L+ I+ Sbjct: 189 EEVLDYID 196 >gi|313887114|ref|ZP_07820810.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas asaccharolytica PR426713P-I] gi|332300425|ref|YP_004442346.1| GTP-binding protein engB [Porphyromonas asaccharolytica DSM 20707] gi|312923343|gb|EFR34156.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas asaccharolytica PR426713P-I] gi|332177488|gb|AEE13178.1| GTP-binding protein engB [Porphyromonas asaccharolytica DSM 20707] Length = 203 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 105/181 (58%), Gaps = 10/181 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P + P++ PE AF GRSNVGKSSLIN+L K LA TS PG+TQ +N F+ Sbjct: 8 FVQSSPSVKSCPQSTLPEYAFIGRSNVGKSSLINMLTGHKGLAMTSQKPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYAR + + + LI +Y+++R L +++L+D RH Sbjct: 68 NE---------SWHLVDLPGYGYARRSLEQREQFRKLIDQYVTKREALVNLFVLVDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTAHPEVIPTS 192 ++ID + + + +K + + IV TK DK+ ++ +E + L+ ++ P + ++ Sbjct: 119 PQRIDLEFINEMGEKGIPFSIVFTKADKIGKQVQRDAVEAYQSRLLEDWEELPPLFVTSA 178 Query: 193 S 193 S Sbjct: 179 S 179 >gi|37524399|ref|NP_927743.1| GTPase EngB [Photorhabdus luminescens subsp. laumondii TTO1] gi|81572743|sp|Q7N9E9|ENGB_PHOLL RecName: Full=Probable GTP-binding protein EngB gi|36783823|emb|CAE12685.1| Probable GTP-binding protein engB [Photorhabdus luminescens subsp. laumondii TTO1] Length = 210 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 9/162 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FITSAPDIRHLPQDMGIEVAFAGRSNAGKSSALNALTKQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 EE---------GIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRECLIGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +K +DQ + + V ++LTK DKL+ + L K + Sbjct: 124 LKDLDQQMIQWAVAMQVPVMVLLTKADKLASGARKSQLNKVR 165 >gi|325576528|ref|ZP_08147281.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus parainfluenzae ATCC 33392] gi|325161218|gb|EGC73332.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus parainfluenzae ATCC 33392] Length = 209 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N F Sbjct: 18 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 77 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+K W + YL +R L + +L+D RH Sbjct: 78 E---------PNCKLVDLPGYGYAAVPEKMKIEWQKSLGEYLQKRECLGGLVVLMDIRHP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 129 LKDLDQQMIEWAVSADLPVMLLLTKADKLSQSA 161 >gi|301155454|emb|CBW14920.1| GTP-binding protein [Haemophilus parainfluenzae T3T1] Length = 204 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+K W + YL +R L + +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEKMKIEWQKSLGEYLQKRECLGGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSADLPVMLLLTKADKLSQSA 156 >gi|330815279|ref|YP_004358984.1| Probable GTP-binding protein eng [Burkholderia gladioli BSR3] gi|327367672|gb|AEA59028.1| Probable GTP-binding protein eng [Burkholderia gladioli BSR3] Length = 219 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 95/181 (52%), Gaps = 9/181 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQH+N+ FS + Sbjct: 20 LPPTVVPEIAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINY-----FSVGPADE 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL R L + L++D R + ++D + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEALLSAYLKTRPQLCGMILMMDSRRPLTELDCRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT----SSVKRKGI 199 + +LTK DKL+ + L TK ++ Y A E T S++KR GI Sbjct: 135 WFAPTGKPIHTLLTKCDKLTRQESVNALRNTKKALQAYRDAGYEGALTCQLFSALKRTGI 194 Query: 200 E 200 + Sbjct: 195 D 195 >gi|261879389|ref|ZP_06005816.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bergensis DSM 17361] gi|270333957|gb|EFA44743.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bergensis DSM 17361] Length = 205 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 15/198 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFV 72 F+ P + P+ PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F + Sbjct: 8 FVISAPTVEKCPRDTKPEFAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K++ LVD+PGYGYA+ K ++ +I Y+ +R L +++LID RH Sbjct: 68 DKEW----------YLVDLPGYGYAKRSKSVIEKIDKMIQTYILQRKQLINLFVLIDVRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++ID++ +L + + I+ TK DKL A++ + + + P TS Sbjct: 118 EQQKIDREFIDWLGISGIPFSIIFTKADKLGRVKAKQNADAWMNALLDSWEELPPYFITS 177 Query: 193 SVKRKGIEVLRKAILETI 210 S K+ G R +L+ I Sbjct: 178 SEKKTG----RDEVLDYI 191 >gi|242373965|ref|ZP_04819539.1| GTPase [Staphylococcus epidermidis M23864:W1] gi|242348319|gb|EES39921.1| GTPase [Staphylococcus epidermidis M23864:W1] Length = 195 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/171 (37%), Positives = 97/171 (56%), Gaps = 11/171 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNFF N Sbjct: 21 PETEMAEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFF---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I YL++R L+ V L+D RH + D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKVQREKFGKMIEEYLTQRENLQLVIQLVDLRHNPTEDDVLMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 L + ++ TK DK++ Q+ ++ K + P E+I SS+K Sbjct: 132 LKHFDIPTLVICTKEDKIAKGKVQKHIKNIKEKLDLEP--EDEIISYSSIK 180 >gi|315653482|ref|ZP_07906403.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners ATCC 55195] gi|315489173|gb|EFU78814.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners ATCC 55195] Length = 195 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/186 (38%), Positives = 102/186 (54%), Gaps = 10/186 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A SGRSNVGKSSLIN ++NR+NLARTS PG+TQ LNF++ Sbjct: 19 PQDDLPEFALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTLNFYLVN---------T 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K+ +G +I YL R+ L+ + LL+D RH D ++F++ Sbjct: 70 DLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTVDDINMFNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + +V TKIDKL + + LE L + + +P SS + I+ K Sbjct: 130 ALCLNIPILVVATKIDKLKKSAIGQ-LESKIGLSLDLTQSQVTFLPFSSETKINIDKFWK 188 Query: 205 AILETI 210 I +I Sbjct: 189 WIENSI 194 >gi|309782865|ref|ZP_07677585.1| ribosome biogenesis GTP-binding protein YsxC [Ralstonia sp. 5_7_47FAA] gi|308918289|gb|EFP63966.1| ribosome biogenesis GTP-binding protein YsxC [Ralstonia sp. 5_7_47FAA] Length = 263 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 8/188 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F K Sbjct: 19 LPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSKTPGRTQHINYF---SVMPAKAED 75 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA AP + W L+ Y+ R L + +++D R +D + Sbjct: 76 PLGFLVDLPGYGYAEAPGETKSHWVHLLGDYVQARQQLAGLVIMMDARRPFTDLDCQMVE 135 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPT----SSVKRKG 198 + ++LTK DKL+ A L + ++ +Y +V T SS+KR+G Sbjct: 136 WFLPTGKPIHVLLTKADKLTNNDASRALMAARKVLADYRAQIDGDVSLTVQLFSSLKRRG 195 Query: 199 IEVLRKAI 206 IE ++ + Sbjct: 196 IEEAQRIV 203 >gi|110835513|ref|YP_694372.1| GTP-binding protein [Alcanivorax borkumensis SK2] gi|119368787|sp|Q0VL48|ENGB_ALCBS RecName: Full=Probable GTP-binding protein EngB gi|110648624|emb|CAL18100.1| GTP-binding protein [Alcanivorax borkumensis SK2] Length = 208 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/171 (37%), Positives = 93/171 (54%), Gaps = 9/171 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ + P E+AF+GRSN GKSS IN L +++LARTS PGRTQ LNFF Sbjct: 14 LFLQSAQRLDQCPPDEGREVAFAGRSNAGKSSAINRLTGQRSLARTSKTPGRTQLLNFFQ 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + L VD+PGYGYA+ K + W + YLSER L + L++D RH Sbjct: 74 LDEERRL---------VDLPGYGYAKVSKSKRNEWQEHLDHYLSERQALVGLVLMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 +K D + + + + I++TK DKL A+ TL + + ++ +P Sbjct: 125 PLKDFDLMMLEWSAQANMPIHILMTKADKLKFGAAKSTLLQVQKQLKEHPA 175 >gi|121603574|ref|YP_980903.1| ribosome biogenesis GTP-binding protein YsxC [Polaromonas naphthalenivorans CJ2] gi|120592543|gb|ABM35982.1| GTP-binding protein, HSR1-related protein [Polaromonas naphthalenivorans CJ2] Length = 259 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/190 (38%), Positives = 101/190 (53%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL PE+ LP+ PEIAF GRSN GKS+ IN L + LA S PGRTQ +N Sbjct: 33 FLTTAPELKHLPRIEVPEIAFVGRSNAGKSTCINTLTQQHRLAFASKTPGRTQSINL--- 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K + L D+PGYGYA PK+ W ++ YL R L+ + LL D R G Sbjct: 90 --FSLGKQGVTDAVLADLPGYGYAAVPKEAKYRWQQVMGNYLQTRDNLKAIVLLCDPRLG 147 Query: 134 VKQIDQ---DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ DV + + + ++LTK DKL+ T A + L+ I +V Sbjct: 148 LTELDEVLLDVIRPRVEAGLKFLVLLTKSDKLNKTDAAKALQ-----IVKLQAGGGDVKL 202 Query: 191 TSSVKRKGIE 200 SS+KR+G+E Sbjct: 203 FSSLKRQGVE 212 >gi|84386307|ref|ZP_00989335.1| Predicted GTPase [Vibrio splendidus 12B01] gi|84378731|gb|EAP95586.1| Predicted GTPase [Vibrio splendidus 12B01] Length = 219 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 105/195 (53%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + N+K LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKGLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL R +L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQRRESLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + L K + +++ V SS Sbjct: 123 MKDLDQQMIYWAIDSRIPVQVLLTKADKLKSGARKAQLLKIRNDAKSF-GGDVAVDVFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++ LR + E Sbjct: 182 MKGIGVDQLRAKMDE 196 >gi|303239340|ref|ZP_07325868.1| ribosome biogenesis GTP-binding protein YsxC [Acetivibrio cellulolyticus CD2] gi|302593126|gb|EFL62846.1| ribosome biogenesis GTP-binding protein YsxC [Acetivibrio cellulolyticus CD2] Length = 193 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 91/158 (57%), Gaps = 9/158 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F +G + P PE+ F GRSNVGKSSLIN L+NRK+LAR ++ PG+T+ +NF+ Sbjct: 8 FEKGAVKPEQYPDNDIPEVTFVGRSNVGKSSLINALLNRKSLARIASKPGKTREINFYNI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYGYA+ K +WG I YL+E L+ V +L+D RH Sbjct: 68 DD---------VLYFVDLPGYGYAKVSKDIKSAWGESIETYLNESKKLKLVVMLVDIRHS 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL 171 + DQ + +L ++ + +V TK DK+ + +E L Sbjct: 119 PSEDDQMMSKWLTSSSLPFIVVATKKDKIPRSKVKERL 156 >gi|269123059|ref|YP_003305636.1| GTP-binding protein HSR1-like protein [Streptobacillus moniliformis DSM 12112] gi|268314385|gb|ACZ00759.1| GTP-binding protein HSR1-related protein [Streptobacillus moniliformis DSM 12112] Length = 191 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/176 (41%), Positives = 97/176 (55%), Gaps = 17/176 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 K EIAF GRSNVGKSSLIN +V R NLARTS PGRTQ +NFF V KD Sbjct: 20 EKMNNTEIAFVGRSNVGKSSLINTIVKRNNLARTSKTPGRTQLVNFFLVNKD-------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVF 142 VD+PGYG+A+ P +WG +I YL SER + V++L+D R D ++ Sbjct: 72 --RYFVDLPGYGFAKVPANIKKNWGNIISEYLNSERK--KVVFVLLDIRRVPSGEDIEML 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +L+ + Y I+ TK DKLS E + K + + ++ +V SS+K G Sbjct: 128 EYLEHYNIEYYIIFTKCDKLS---NNEKFRQLKEIKKKLEFSNEDVFFHSSLKNIG 180 >gi|78484393|ref|YP_390318.1| GTP-binding protein, HSR1-related [Thiomicrospira crunogena XCL-2] gi|119369276|sp|Q31JM9|ENGB_THICR RecName: Full=Probable GTP-binding protein EngB gi|78362679|gb|ABB40644.1| cell division checkpoint GTPase YihA [Thiomicrospira crunogena XCL-2] Length = 212 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 117/212 (55%), Gaps = 14/212 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + H ++ ++ +L+ P++ P+ E+AF+GRSN GKSS +N++ +++ LA+TS Sbjct: 1 MQHPLYQQAT--YLKSAPDLSHCPEDFGYEVAFAGRSNAGKSSALNVITSQRGLAKTSKT 58 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +NFF + LVD+PGYGYA+ +W + +Y+ RS+L Sbjct: 59 PGRTQLINFFECDE---------QRKLVDLPGYGYAKVNVNTKRAWERSLSQYIEVRSSL 109 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RN 180 + + +++D R +ID + + + I+LTK DKL AQ +L K + L+ Sbjct: 110 KGLIMMVDSRMPPTEIDLMMLDWTLTLNLPVHILLTKSDKLKKGPAQNSLLKMRQLLNEK 169 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 YP H V SS+KR+G++ + + E + Y Sbjct: 170 YP--HATVQLFSSLKRQGLDEVWAKLDEWMEY 199 >gi|284800140|ref|ZP_05985804.2| ribosome biogenesis GTP-binding protein YsxC [Neisseria subflava NJ9703] gi|284795853|gb|EFC51200.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria subflava NJ9703] Length = 231 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 101/194 (52%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 27 FFTTVNHLKDLPDT-PAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 84 ----ELEN---GNFMVDLPGYGYAQVPEAIRAHWVKLLGDYLQQRRQLIGLILIMDSRHP 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K +D + F I+L+K DKLS +TL K ++ Y V S Sbjct: 137 LKALDIQMLDFFHITGRPVHILLSKADKLSKNDQIKTLAAVKKSLKPYTDRQKISVQLFS 196 Query: 193 SVKRKGIEVLRKAI 206 S+K++G+E + + + Sbjct: 197 SLKKQGMEEVNQVV 210 >gi|212638449|ref|YP_002314969.1| ribosome biogenesis GTP-binding protein YsxC [Anoxybacillus flavithermus WK1] gi|226741194|sp|B7GH28|ENGB_ANOFW RecName: Full=Probable GTP-binding protein EngB gi|212559929|gb|ACJ32984.1| GTP-binding protein YscX, possible signaling factor [Anoxybacillus flavithermus WK1] Length = 193 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 60/155 (38%), Positives = 86/155 (55%), Gaps = 9/155 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE A +GRSNVGKSS IN ++NRKN ARTS+ PG+TQ LNF+ D Sbjct: 19 PAGQLPEFALAGRSNVGKSSFINKMINRKNFARTSSKPGKTQTLNFYRIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A VD+PGYG+A+ K ++WG +I Y + R L+ L++D RH + D ++ F Sbjct: 70 AFYFVDVPGYGFAKVSKTEREAWGKMIETYFTTREQLKAALLIVDLRHPPTKDDVMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 L + ++ TK DK+ Q+ + K +R Sbjct: 130 LKHYNIPTLVIATKADKIPRGKWQQHAKVAKETLR 164 >gi|225023445|ref|ZP_03712637.1| hypothetical protein EIKCOROL_00303 [Eikenella corrodens ATCC 23834] gi|224943794|gb|EEG25003.1| hypothetical protein EIKCOROL_00303 [Eikenella corrodens ATCC 23834] Length = 219 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/175 (38%), Positives = 96/175 (54%), Gaps = 14/175 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P EIAF GRSN GKSS IN L LA S PGRTQH+NFF +L N + Sbjct: 23 PAEIAFVGRSNAGKSSAINTLTAHTRLAYVSKTPGRTQHINFF------SLANG---HYM 73 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYA+ P+ W L+ YL R+ L + L++D RH +K++D+ + F Sbjct: 74 VDLPGYGYAQVPEAVRAHWVQLLGGYLQTRAQLIGLVLVMDARHPLKELDKQMLEFFAST 133 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT---SSVKRKGIE 200 I+L+K DKLS +TL + ++ P A + + SS+K++G+E Sbjct: 134 GKPVHILLSKADKLSKNEQIKTLAAVRRALQ--PFAERQAVGVQLFSSLKKQGME 186 >gi|148976537|ref|ZP_01813233.1| GTPase EngB [Vibrionales bacterium SWAT-3] gi|145964113|gb|EDK29370.1| GTPase EngB [Vibrionales bacterium SWAT-3] Length = 223 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 106/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 76 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRESLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + L K + ++ V SS Sbjct: 127 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKQGARKAQLLKIRKDAESF-GGDVAVDVFSS 185 Query: 194 VKRKGIEVLRKAILE 208 +K G++ LR + E Sbjct: 186 LKGIGVDQLRNKMDE 200 >gi|218708175|ref|YP_002415796.1| putative GTP-binding protein EngB [Vibrio splendidus LGP32] gi|218321194|emb|CAV17144.1| Probable GTP-binding protein engB [Vibrio splendidus LGP32] Length = 269 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 106/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + N+K+LA+TS PGRTQ +N F Sbjct: 62 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKSLAKTSKTPGRTQLINLFKV 121 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL R +L+ + +L+D RH Sbjct: 122 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQRRESLKGLVVLMDIRHP 172 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + L K + +++ V SS Sbjct: 173 MKDLDQQMIYWAIDSRIPVQVLLTKADKLKSGARKAQLLKIRNDAKSF-GGDVAVDVFSS 231 Query: 194 VKRKGIEVLRKAILE 208 +K G++ LR + E Sbjct: 232 MKGIGVDQLRAKMDE 246 >gi|313672845|ref|YP_004050956.1| ribosome biogenesis gtp-binding protein ysxc [Calditerrivibrio nitroreducens DSM 19672] gi|312939601|gb|ADR18793.1| ribosome biogenesis GTP-binding protein YsxC [Calditerrivibrio nitroreducens DSM 19672] Length = 196 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 18/210 (8%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M+ F KSA+ + + P I L PE+ F G+SNVGKSS IN L+NRK+LAR Sbjct: 1 MLVQAEFIKSAF-YPKDFPIIDL------PEVCFVGKSNVGKSSAINTLINRKDLARVGK 53 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+T+ LNFF ++K + LVD+PGYGYA+ KK + W I YL R+ Sbjct: 54 TPGKTRLLNFF------SIKAKDISFVLVDLPGYGYAQVSKKEREEWKKSIENYLKFRNN 107 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ V ++D R + D+ +F +L + ++LTK DKLS + L K YL Sbjct: 108 LKLVVFILDIRRDPDEQDEVMFKWLKAYNKDFVMLLTKSDKLSNNEIAKRL-KELYL--- 163 Query: 181 YPTAHPE-VIPTSSVKRKGIEVLRKAILET 209 +P + + I SS+ ++G + L + I+E Sbjct: 164 HPMINVDNCIIFSSLTKRGKDELYQKIVEC 193 >gi|297588712|ref|ZP_06947355.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna ATCC 53516] gi|297574085|gb|EFH92806.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna ATCC 53516] Length = 205 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 9/147 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIAF GRSNVGKSS IN +++RKNLARTS+ PG+T+ +NF+ N Sbjct: 23 PDESLPEIAFCGRSNVGKSSFINSILDRKNLARTSSKPGKTRTVNFY---------NANN 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K W +I YL+ R L V+L++D RH D++++++ Sbjct: 74 EFRLVDLPGYGYAQTSKSEKKKWAQVIETYLNNRRNLYEVFLIVDIRHKPTVQDKEMYNW 133 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETL 171 + + ++ TK+DK+ T ++ L Sbjct: 134 IIQSGFCGFVIATKLDKIGKTIIKKNL 160 >gi|115439749|ref|NP_001044154.1| Os01g0732200 [Oryza sativa Japonica Group] gi|57899709|dbj|BAD87429.1| putative GTP-binding protein [Oryza sativa Japonica Group] gi|113533685|dbj|BAF06068.1| Os01g0732200 [Oryza sativa Japonica Group] gi|215695283|dbj|BAG90474.1| unnamed protein product [Oryza sativa Japonica Group] Length = 316 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/193 (40%), Positives = 101/193 (52%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 129 PRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKVND--------- 179 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA AP++ +W Y R L V+LL+D K+ID D S+ Sbjct: 180 SWYLVDLPGYGYAAAPQEARTNWDEFTRNYFLGRENLVSVFLLVDASIPAKKIDLDYASW 239 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + V +V TK DK +E +E + LIR Y A P I TSSV +G Sbjct: 240 LGQNKVPMTLVFTKCDKRKKKKNGGKRPEENVENFQSLIREYFEAAPPWIMTSSVTNQGR 299 Query: 200 EVLRKAILETINY 212 + + + + NY Sbjct: 300 DEILLHMSQLRNY 312 >gi|261210181|ref|ZP_05924478.1| GTP-binding protein EngB [Vibrio sp. RC341] gi|260840721|gb|EEX67270.1| GTP-binding protein EngB [Vibrio sp. RC341] Length = 220 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AEGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|163859239|ref|YP_001633537.1| ribosome biogenesis GTP-binding protein YsxC [Bordetella petrii DSM 12804] gi|163262967|emb|CAP45270.1| putative GTP-binding protein [Bordetella petrii] Length = 257 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/186 (35%), Positives = 99/186 (53%), Gaps = 4/186 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + LP G PE+ F GRSN GKSS IN+L N++ LA +S PGRT+ +N F Sbjct: 59 FFVSAARLDQLPAPGAPEVCFVGRSNAGKSSAINVLCNQRRLAFSSKTPGRTRLINLFGL 118 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L + P LVD+PGYGYA + + W ++ YL +RS+L + L+ID R G Sbjct: 119 PD--PLSPDQPLGFLVDLPGYGYASVAHREKEKWADVLGGYLRDRSSLAGIVLIIDIRRG 176 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ++D+ + F+ +LTK DKL Q T+ + + + H +P S+ Sbjct: 177 ITELDRRLADFIAPTGRPVLALLTKADKLPYGQRQRTVFAVRKDLADIGALH--TVPFSA 234 Query: 194 VKRKGI 199 +R G+ Sbjct: 235 TERIGL 240 >gi|293602589|ref|ZP_06685033.1| ribosome biogenesis GTP-binding protein YsxC [Achromobacter piechaudii ATCC 43553] gi|292819016|gb|EFF78053.1| ribosome biogenesis GTP-binding protein YsxC [Achromobacter piechaudii ATCC 43553] Length = 207 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 4/187 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + LP AG PE+ F GRSN GKS+ IN+L N++ LA +S PGRT+ +N F Sbjct: 9 FLTSAARLDQLPAAGAPEVCFVGRSNAGKSTAINVLCNQRRLAFSSKTPGRTRLINMFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + + ++ LVD+PGYGYA + + W ++ YL +R +L + LLID R G Sbjct: 69 PDPLDPEGHI--GFLVDLPGYGYASVARNEKEKWADILGGYLRDRESLAGIVLLIDIRRG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V ++D+ + +F+ +LTK DKL T+ + + + H IP S+ Sbjct: 127 VTELDRRLANFIAPTGRPVLALLTKADKLPYGQRMRTVFSVRKDLADIGALH--TIPFSA 184 Query: 194 VKRKGIE 200 +R G+E Sbjct: 185 PERIGLE 191 >gi|325856392|ref|ZP_08172108.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola CRIS 18C-A] gi|327312485|ref|YP_004327922.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola F0289] gi|325483576|gb|EGC86548.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola CRIS 18C-A] gi|326944463|gb|AEA20348.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola F0289] Length = 199 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/199 (38%), Positives = 104/199 (52%), Gaps = 12/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + P E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTISSPSVSRCPADTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NN LVD+PGYGYA+ K + +I +Y+ +R L V++LID RH Sbjct: 68 -------NN--EWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPTS 192 + ID++ +L + + I+ TK DKLSP A+ L K L + T P I ++ Sbjct: 119 QQTIDREFVDWLGGSNIPFSIIFTKADKLSPAKAKSNALMWMKKLEDRWETLPPYFITSA 178 Query: 193 SVKRKGIEVLRKAILETIN 211 K E+L +E IN Sbjct: 179 EKKEGKDEILD--YIEQIN 195 >gi|237749544|ref|ZP_04580024.1| GTP-binding protein EngB [Oxalobacter formigenes OXCC13] gi|229380906|gb|EEO30997.1| GTP-binding protein EngB [Oxalobacter formigenes OXCC13] Length = 231 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 104/207 (50%), Gaps = 12/207 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV- 72 F + V + LPK PE+AF GRSN GKSS IN L N+K+LA S PGRTQH+NFF Sbjct: 9 FYKTVNHLRDLPKLDVPEVAFVGRSNAGKSSAINTLCNQKSLAFASKTPGRTQHINFFSI 68 Query: 73 ------PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 ++ + M LVD+PGYG+A+ + W L+ YL R L + L Sbjct: 69 GGAHVGQHRHDPVRESEIDMFLVDLPGYGFAQVSGSAKEHWQKLLSDYLIHRQQLTGLVL 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D RH + +D + + +LTK DKL+ + + L++ ++++Y Sbjct: 129 VMDARHPFQPLDVQLLEWFAVTGKPVHCLLTKADKLNRSESTNALKQVDTILKSYVDEEG 188 Query: 187 EVIP-----TSSVKRKGIEVLRKAILE 208 P SS KR GI+ IL+ Sbjct: 189 NPFPFTAQLFSSTKRIGIKEATDTILQ 215 >gi|289662601|ref|ZP_06484182.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 188 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 9/180 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 1 MPDDGGFEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ--------- 51 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 52 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 111 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL + L+K K + + V S R+G++ LR Sbjct: 112 YAAERGLPAHGLLTKADKLGRGQQMQALQKVKKEVTSRFGDSVTVQTYSGESRQGVDELR 171 >gi|169824742|ref|YP_001692353.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna ATCC 29328] gi|238687756|sp|B0S273|ENGB_FINM2 RecName: Full=Probable GTP-binding protein EngB gi|167831547|dbj|BAG08463.1| GTP-binding protein EngB family [Finegoldia magna ATCC 29328] Length = 201 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 9/147 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIAF GRSNVGKSS IN +++RKNLARTS+ PG+T+ +NF+ N Sbjct: 19 PDESLPEIAFCGRSNVGKSSFINSILDRKNLARTSSKPGKTRTVNFY---------NANN 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K W +I YL+ R L V+L++D RH D++++++ Sbjct: 70 EFRLVDLPGYGYAQTSKSEKKKWAQVIETYLNNRRNLYEVFLIVDIRHKPTVQDKEMYNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETL 171 + + ++ TK+DK+ T ++ L Sbjct: 130 IIQSGFCGFVIATKLDKIGKTMIKKNL 156 >gi|292493379|ref|YP_003528818.1| GTP-binding protein HSR1-related protein [Nitrosococcus halophilus Nc4] gi|291581974|gb|ADE16431.1| GTP-binding protein HSR1-related protein [Nitrosococcus halophilus Nc4] Length = 205 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/185 (38%), Positives = 101/185 (54%), Gaps = 14/185 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+GRSNVGKSS IN + N K LARTS PGRTQ +NFF L Sbjct: 22 LPPDRGMEVAFAGRSNVGKSSAINAITNIKGLARTSKTPGRTQMINFF----------QL 71 Query: 84 PA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 A LVD+PGYGYA+ P+ W + YL R +L + L++D R + D + Sbjct: 72 DARRCLVDLPGYGYAKVPEAVKRQWRQTLSNYLEWRQSLCGIVLVMDIRRLFQPFDLQML 131 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + + + I+LTK DKL A++ LEK T +L +P+A ++ S+ R G+E Sbjct: 132 EWCRARGLPVCILLTKSDKLKRGAAKQALEKVTAHLQEAFPSARAQLF--SAHNRMGVEA 189 Query: 202 LRKAI 206 ++ + Sbjct: 190 IQAQL 194 >gi|218187495|gb|EEC69922.1| hypothetical protein OsI_00346 [Oryza sativa Indica Group] Length = 225 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 100/176 (56%), Gaps = 10/176 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F +D + LVD Sbjct: 41 EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVED---------GIRLVD 91 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA P++ W + YL R++L+ + +L+D RH +K +DQ + + Sbjct: 92 LPGYGYAEVPEEMKRKWQRALGEYLQMRNSLKGLVVLMDIRHPLKDLDQQMIQWAVDVGT 151 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++LTK DKL+ + L + + + +V SS+K+ G++ LR+ + Sbjct: 152 PVLVLLTKADKLASGARKAQLNMVREAVLPF-MGDIQVEAFSSLKKIGVDKLRQKL 206 >gi|312882609|ref|ZP_07742348.1| putative GTP-binding protein EngB [Vibrio caribbenthicus ATCC BAA-2122] gi|309369694|gb|EFP97207.1| putative GTP-binding protein EngB [Vibrio caribbenthicus ATCC BAA-2122] Length = 219 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 107/206 (51%), Gaps = 18/206 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N++ LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSSLNRLTNQRGLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 ID---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 123 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAEGF-GGDVSVAAFSS 181 Query: 194 VKRKGIEVLRK--------AILETIN 211 +K G++ LR A+ ETI+ Sbjct: 182 LKGIGVDTLRSKLDDWFAPAVAETIS 207 >gi|269468141|gb|EEZ79848.1| cell division checkpoint GTPase YihA [uncultured SUP05 cluster bacterium] Length = 199 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 98/189 (51%), Gaps = 11/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + P E+ F+GRSN GKSS IN L +K LA+ S PGRTQHL FF Sbjct: 10 FLLSCPSLKGCPPDQGYEVIFAGRSNAGKSSAINTLTLQKKLAKVSRTPGRTQHLVFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L N LVD+PGYGYA+ P++ W + Y ++R L+ L++DCR Sbjct: 68 ----ELDQN---RRLVDLPGYGYAKVPERVKKQWHIDMSEYFNKRQCLKGAVLVMDCRRP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + DQ + + + QI+LTK DKL A K K I +P ++ SS Sbjct: 121 LTPFDQMMLDWCISINLPTQILLTKSDKLKKGAASNARLKVKRAIEQHPYVDVQLF--SS 178 Query: 194 VKRKGIEVL 202 +K++G+E L Sbjct: 179 LKKQGLEEL 187 >gi|187476580|ref|YP_784604.1| ribosome biogenesis GTP-binding protein YsxC [Bordetella avium 197N] gi|115421166|emb|CAJ47650.1| probable GTP-binding protein [Bordetella avium 197N] Length = 207 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 4/177 (2%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP AG PE+AF GRSN GKSS IN+L N++ LA +S PGRT+ +N F D N + Sbjct: 19 LPPAGAPEVAFVGRSNAGKSSSINVLCNQRRLAFSSKTPGRTRLINMFGLPDPLNPQQ-- 76 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA + + W ++ YL +RS+L + L+ID R GV ++D+ + Sbjct: 77 PLGFLVDLPGYGYASVAHREKEKWADILGGYLRDRSSLVGIVLMIDIRRGVTELDRRLAD 136 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 F+ +LTK DKL T+ + + + + + +P S+ +R G+E Sbjct: 137 FIAPTGRPVLALLTKADKLPYGHRVRTVFEVRKQLADIGALN--TVPFSATERIGLE 191 >gi|259906707|ref|YP_002647063.1| ribosome biogenesis GTP-binding protein YsxC [Erwinia pyrifoliae Ep1/96] gi|224962329|emb|CAX53784.1| Probable GTP-binding protein EngB [Erwinia pyrifoliae Ep1/96] gi|283476490|emb|CAY72305.1| probable GTP-binding protein engB [Erwinia pyrifoliae DSM 12163] gi|310765930|gb|ADP10880.1| ribosome biogenesis GTP-binding protein YsxC [Erwinia sp. Ejp617] Length = 209 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+++LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQRSLARTSKTPGRTQLINLFQV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 AE---------GYRLVDLPGYGYAEVPEETKLKWQRSLAEYLHDRHCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D+ + + + ++LTK DKL+ + L + + + EV SS Sbjct: 122 LKELDRQMVLWAVQSGREVLVLLTKADKLASGARKAQLNAVREEAKTF-LGTVEVELFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ L + + Sbjct: 181 LKKIGVDKLSQKL 193 >gi|85710995|ref|ZP_01042056.1| GTP-binding protein [Idiomarina baltica OS145] gi|85695399|gb|EAQ33336.1| GTP-binding protein [Idiomarina baltica OS145] Length = 225 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P I LP+ EIAF+GRSN GKSS +N L ++NLARTS PGRTQ +N F Sbjct: 23 FITSAPNIRKLPEDSGIEIAFAGRSNAGKSSALNTLTRQRNLARTSKTPGRTQLINVF-- 80 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+D+PGYG+A+ P + + W + YL +R +L+ + +L+D RH Sbjct: 81 -------ETATGQRLIDLPGYGFAKVPMEVKEQWQRSLSEYLEKRDSLKGLVVLMDIRHP 133 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ DQ++ + + +LTK DKL + TL K + + +V SS Sbjct: 134 FRETDQELIYWAVDCGIPVLALLTKADKLKQGARKSTLLKARQAAIAF-NGDVQVEVFSS 192 Query: 194 VKRKGIEVLRKAI 206 +K+ GI+ L + Sbjct: 193 LKKFGIDQLENKL 205 >gi|212711547|ref|ZP_03319675.1| hypothetical protein PROVALCAL_02620 [Providencia alcalifaciens DSM 30120] gi|212685649|gb|EEB45177.1| hypothetical protein PROVALCAL_02620 [Providencia alcalifaciens DSM 30120] Length = 206 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 104/191 (54%), Gaps = 10/191 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LPK E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P+ W + YL +R ++ + +L+D RH Sbjct: 73 EE---------GIRLVDLPGYGYAEVPEDMKRKWQQALGEYLQKRECIKGLVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +K +D + + + ++LTK DKL S ++ +E + L EV S Sbjct: 124 LKDLDMQMIEWSVAMNIPVLVLLTKADKLASGARKKQLMEVRQALAPLEAEGDIEVEYFS 183 Query: 193 SVKRKGIEVLR 203 ++K+ GI+ LR Sbjct: 184 ALKKIGIDKLR 194 >gi|145356924|ref|XP_001422673.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582916|gb|ABP00990.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 253 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 12/191 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ ++ PK PEIA GRSNVGKSSL+N+L NRK+LA+TS PG+TQ +N + Sbjct: 14 FVQACVDLAGCPKPTLPEIAVIGRSNVGKSSLVNMLTNRKSLAKTSKNPGKTQTINHY-- 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA AP+ + W YL +R +L V LLID Sbjct: 72 ----RMTTGDGKFYLVDLPGYGYANAPEDLREKWAAFTREYLIKRESLITVLLLIDSTVK 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA------QETLEKTKYLIRNYPTAHPE 187 +++D + +L + V +V TK+DK A E +E+ + Y P Sbjct: 128 PQRLDLECLDWLGEAGVPVTVVFTKVDKRKKVGAGKRANPAENVEEFCREVSEYWDELPP 187 Query: 188 VIPTSSVKRKG 198 ++ TSSV +G Sbjct: 188 MLYTSSVNGEG 198 >gi|309804144|ref|ZP_07698222.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 11V1-d] gi|309807084|ref|ZP_07701063.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 03V1-b] gi|309807950|ref|ZP_07701878.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 01V1-a] gi|309809256|ref|ZP_07703125.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners SPIN 2503V10-D] gi|312873935|ref|ZP_07733971.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2052A-d] gi|325911981|ref|ZP_08174383.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners UPII 143-D] gi|308163727|gb|EFO65996.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 11V1-d] gi|308166514|gb|EFO68714.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 03V1-b] gi|308168801|gb|EFO70891.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 01V1-a] gi|308170369|gb|EFO72393.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners SPIN 2503V10-D] gi|311090484|gb|EFQ48892.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2052A-d] gi|325476166|gb|EGC79330.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners UPII 143-D] Length = 195 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/138 (44%), Positives = 85/138 (61%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA SGRSNVGKSSLIN ++NR+NLARTS PG+TQ LNF++ Sbjct: 19 PQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTLNFYLVN---------T 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K+ +G +I YL R+ L+ + LL+D RH D ++F++ Sbjct: 70 DLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHDPTVDDINMFNY 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 + +V TKIDKL Sbjct: 130 ALCLNIPILVVATKIDKL 147 >gi|292486522|ref|YP_003529388.1| putative GTP-binding protein engB [Erwinia amylovora CFBP1430] gi|292897760|ref|YP_003537129.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291197608|emb|CBJ44702.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946] gi|291551935|emb|CBA18972.1| probable GTP-binding protein engB [Erwinia amylovora CFBP1430] gi|312170590|emb|CBX78853.1| probable GTP-binding protein engB [Erwinia amylovora ATCC BAA-2158] Length = 212 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+++LARTS PGRTQ +N F Sbjct: 14 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQRSLARTSKTPGRTQLINLFQV 73 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 74 AE---------GYRLVDLPGYGYAEVPEETKLKWQRSLAEYLHDRHCLKGLVVLMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D+ + + + ++LTK DKL+ + L + + + EV SS Sbjct: 125 LKELDRQMVLWAVQSGREVLVLLTKADKLASGARKAQLNAVREEAKTF-LGTVEVELFSS 183 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ L + + Sbjct: 184 LKKIGVDKLSQKL 196 >gi|83643889|ref|YP_432324.1| GTPase [Hahella chejuensis KCTC 2396] gi|119369202|sp|Q2SN75|ENGB_HAHCH RecName: Full=Probable GTP-binding protein EngB gi|83631932|gb|ABC27899.1| predicted GTPase [Hahella chejuensis KCTC 2396] Length = 222 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 102/194 (52%), Gaps = 15/194 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F SA + P++G+ E+AF+GRSN GKSS +N + LA+TS PGRTQ Sbjct: 16 FLMSAEQLQQCPPDVGV-------EVAFAGRSNAGKSSALNAITQNGKLAKTSKTPGRTQ 68 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NFF N LVD+PGYGYA+ PK ++ W + RYL R TL + L Sbjct: 69 LINFFT--------LNSEGCRLVDLPGYGYAKVPKAMLEKWRSNLQRYLEHRLTLNALIL 120 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D RH + D + + + + + ++LTK DKL A+ TL++ K ++ Sbjct: 121 VMDIRHPLSPFDCSMLDWCEARDLPTLVLLTKADKLKYGPAKTTLQEVKKELKQKWRFPV 180 Query: 187 EVIPTSSVKRKGIE 200 E SSV + G+E Sbjct: 181 EAQLFSSVSKVGVE 194 >gi|152978187|ref|YP_001343816.1| GTPase EngB [Actinobacillus succinogenes 130Z] gi|171704208|sp|A6VLN4|ENGB_ACTSZ RecName: Full=Probable GTP-binding protein EngB gi|150839910|gb|ABR73881.1| GTP-binding protein HSR1-related [Actinobacillus succinogenes 130Z] Length = 206 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 9/165 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F Sbjct: 13 FLTSAANIKQLPEDSGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L V +L+D RH Sbjct: 73 E---------PNCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQKRECLGGVVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 +K +DQ + + + ++LTK DKLS + +T++ + I Sbjct: 124 LKALDQQMIEWAVSADLPLLLLLTKADKLSQSARSKTVKMVREAI 168 >gi|328956135|ref|YP_004373468.1| ribosome biogenesis GTP-binding protein YsxC [Coriobacterium glomerans PW2] gi|328456459|gb|AEB07653.1| ribosome biogenesis GTP-binding protein YsxC [Coriobacterium glomerans PW2] Length = 196 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 13/196 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + +P + PE+ F+GRSNVGKSS++N L RKNL + SN PG+T ++N F Sbjct: 12 FVASFGKASQIPLSTCPEVTFAGRSNVGKSSIMNKLFGRKNLVKVSNTPGKTANINLF-- 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +D+PGYGYA+ K W GLI + + + V L+D RH Sbjct: 70 --------EADGIHFIDLPGYGYAQRSKAERSRWAGLIADFFALERSFNLVVALVDIRHD 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +D + FL + + + LTK DKL+ + I P ++I TS+ Sbjct: 122 PSALDHQMIEFLQHNELHFVVALTKADKLNRSQQARQRASISSQIDVDPA---DIITTSA 178 Query: 194 VKRKGIEVLRKAILET 209 GI+VL++ I + Sbjct: 179 RSGTGIDVLKERIAQA 194 >gi|237742955|ref|ZP_04573436.1| GTP-binding protein [Fusobacterium sp. 4_1_13] gi|229430603|gb|EEO40815.1| GTP-binding protein [Fusobacterium sp. 4_1_13] Length = 194 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 23/194 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F KSA ++ + PE + E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 8 FVKSA-VYEKDYPE-----QLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++ Sbjct: 62 LINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFV 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTA 184 L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ KT+ + N Sbjct: 112 LLDIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDN---- 167 Query: 185 HPEVIPTSSVKRKG 198 +V SS+ KG Sbjct: 168 -EDVFFHSSLTNKG 180 >gi|237734815|ref|ZP_04565296.1| GTPase engB [Mollicutes bacterium D7] gi|229382143|gb|EEO32234.1| GTPase engB [Coprobacillus sp. D7] Length = 199 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+ +GRSNVGKSS IN ++N LA+ S PG+T+ LNFF D Sbjct: 20 PEESFPEMCLAGRSNVGKSSFINAMLNHNGLAKVSGTPGKTRTLNFFNVND--------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ +G + Y++ RSTLR LL+D RH + D ++ F Sbjct: 71 ALYFVDVPGYGYAKVNDSITKQFGKTMDEYITLRSTLRGFILLVDYRHKPTKDDVLMYEF 130 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVL 202 + V +V TK DKL + L+K + +I++ HPE + SS+++KGIE Sbjct: 131 VKHHDVPVMVVATKEDKLK----RNDLKKNEKIIKDTLGFHPEDKFVRFSSLRKKGIEEA 186 Query: 203 RKAILE 208 I E Sbjct: 187 WNFIYE 192 >gi|288800196|ref|ZP_06405655.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 299 str. F0039] gi|288333444|gb|EFC71923.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 299 str. F0039] Length = 203 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P + P E AF GRSNVGKSSLIN+L K LA+TS+ PG+T +N F+ Sbjct: 8 FVVSSPTVSKCPTDNKYEYAFIGRSNVGKSSLINMLCTHKGLAKTSSKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K +I +Y+ +R L +++LID RH Sbjct: 68 NN---------EWYLVDLPGYGYAKQSKAVQKKLQQMISQYILQREQLINLFVLIDIRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L V + I+ TK DKL P AQ+ +++ P TS+ Sbjct: 119 QQKIDREFIDWLGASQVPFTIIFTKADKLGPVAAQKNASAWMRALQDAWEELPPYFITSA 178 Query: 194 VKRKGIEVLRKAILETINY 212 K+ G E E +NY Sbjct: 179 EKKTGKE-------EVLNY 190 >gi|291326949|ref|ZP_06126451.2| ribosome biogenesis GTP-binding protein YsxC [Providencia rettgeri DSM 1131] gi|291312279|gb|EFE52732.1| ribosome biogenesis GTP-binding protein YsxC [Providencia rettgeri DSM 1131] Length = 212 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LPK E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 22 FVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLFEV 81 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL +R ++ + +L+D RH Sbjct: 82 EE---------GVRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRECIKGLVVLMDIRHP 132 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + V ++LTK DKL+ ++ L + + + EV S+ Sbjct: 133 LKDLDMQMIEWSVAMNVPVLVLLTKADKLASGARKKQLMEVRQALAPL-EGDIEVEYFSA 191 Query: 194 VKRKGIEVLR 203 +K+ GI+ LR Sbjct: 192 LKKIGIDKLR 201 >gi|329121866|ref|ZP_08250481.1| ribosome biogenesis GTP-binding protein YsxC [Dialister micraerophilus DSM 19965] gi|327467804|gb|EGF13296.1| ribosome biogenesis GTP-binding protein YsxC [Dialister micraerophilus DSM 19965] Length = 213 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 15/187 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--PKDFSNLKNNLPAMAL 88 EIAF GRSNVGKSSLIN L K LAR S PG+T+ +N++ + N + L Sbjct: 34 EIAFIGRSNVGKSSLINSLCGNKKLARVSREPGKTRTINYYAVQSRKAINEEEERQDWYL 93 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYG+A+ +KN D W I Y+ + L + LL+D RH +D + +L Sbjct: 94 VDLPGYGFAKTSQKNKDMWSSFISDYIYKSEKLILICLLVDLRHPGLAMDMKAYEWLVNS 153 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTK--YLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V QI+ TK DKL ++ L + K + ++N P A+ SS+K +G RK + Sbjct: 154 GVDVQIIATKADKLGNNEKRKNLAQVKKIFQLKNPPIAY------SSLKNEG----RKEL 203 Query: 207 LETI-NY 212 LE I NY Sbjct: 204 LELIENY 210 >gi|307823064|ref|ZP_07653294.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacter tundripaludum SV96] gi|307735839|gb|EFO06686.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacter tundripaludum SV96] Length = 210 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 14/195 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P + P E+AF+GRSN GKSS IN L + LAR S PGRTQ LNFF Sbjct: 10 FINSSPHLSNTPPDQGLEVAFAGRSNAGKSSAINTLTRQNGLARISKTPGRTQMLNFFEI 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA+ P + W L+ YL+ R +L + L++D RH Sbjct: 70 NE---------RQRFVDLPGYGYAKVPLEVKKKWHELMETYLTSRKSLCAIILVMDVRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR--NYPTAHPEVIPT 191 + + D + + + + I+LTK DKL+ A+ TL + + ++ N+P + Sbjct: 121 LTEFDWQMVEWCEHTRLPLHILLTKADKLNYGAAKNTLLQVQKELKDSNFPLT---IQLF 177 Query: 192 SSVKRKGIEVLRKAI 206 SS+K+ GI+ + A+ Sbjct: 178 SSLKKTGIDEVHAAL 192 >gi|90581062|ref|ZP_01236862.1| GTP-binding protein [Vibrio angustum S14] gi|90437758|gb|EAS62949.1| GTP-binding protein [Vibrio angustum S14] Length = 224 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPQDAGVEIAFAGRSNAGKSSALNRLTDQKGLARTSKTPGRTQLINMFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL R L+ + +L+D RH Sbjct: 72 VQGCN---------LIDLPGYGFAQVPLEMKLKWQKSLGEYLQRRECLQGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ + + ++LTK DKL + + K + + ++ +V SS Sbjct: 123 MKDLDQQMINWALESRLPVLVLLTKADKLKSGARKAQVLKIRQMTKDL-EGEVQVEAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++ +R+ + E Sbjct: 182 LKGIGVDQVRRKLDE 196 >gi|104773863|ref|YP_618843.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513870|ref|YP_812776.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|119369207|sp|Q1GAP7|ENGB_LACDA RecName: Full=Probable GTP-binding protein EngB gi|122275360|sp|Q04B34|ENGB_LACDB RecName: Full=Probable GTP-binding protein EngB gi|103422944|emb|CAI97606.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093185|gb|ABJ58338.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125527|gb|ADY84857.1| GTP-binding protein ENGB family [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 200 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 105/185 (56%), Gaps = 13/185 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G EIA +GRSNVGKSS IN L+ RKNLARTS++PG+TQ LNF+ + ++ Sbjct: 19 PEGGLDEIALAGRSNVGKSSFINTLLQRKNLARTSSSPGKTQTLNFY------RVDSDQA 72 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ KK + +G +I YL R+ L+ + L+ID RH D ++ + Sbjct: 73 DFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILMIDGRHEPTVDDIAMYDY 132 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE---VIPTSSVKRKGIEV 201 + +V TK+DK+ + KT+ R + + + +P SSV + ++ Sbjct: 133 AQYLNLPILLVATKMDKIK----KNAFNKTEAAFRKHLNLNKDNVTFLPFSSVTKLNVDQ 188 Query: 202 LRKAI 206 ++ I Sbjct: 189 VKDWI 193 >gi|167755847|ref|ZP_02427974.1| hypothetical protein CLORAM_01364 [Clostridium ramosum DSM 1402] gi|167704786|gb|EDS19365.1| hypothetical protein CLORAM_01364 [Clostridium ramosum DSM 1402] Length = 205 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+ +GRSNVGKSS IN ++N LA+ S PG+T+ LNFF D Sbjct: 26 PEESFPEMCLAGRSNVGKSSFINAMLNHNGLAKVSGTPGKTRTLNFFNVND--------- 76 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ +G + Y++ RSTLR LL+D RH + D ++ F Sbjct: 77 ALYFVDVPGYGYAKVNDSITKQFGKTMDEYITLRSTLRGFILLVDYRHKPTKDDVLMYEF 136 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVL 202 + V +V TK DKL + L+K + +I++ HPE + SS+++KGIE Sbjct: 137 VKHHDVPVMVVATKEDKLK----RNDLKKNEKIIKDTLGFHPEDKFVRFSSLRKKGIEEA 192 Query: 203 RKAILE 208 I E Sbjct: 193 WNFIYE 198 >gi|167564385|ref|ZP_02357301.1| GTPase EngB [Burkholderia oklahomensis EO147] Length = 219 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 9/191 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 10 FLTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL R LR + L++D R Sbjct: 70 GPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEQLLSTYLQTRPQLRGMILMMDSRRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA----HPEVI 189 + ++D+ + + +LTK DKL+ + L T+ + Y A V Sbjct: 125 LTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESTNALRATQKDLDAYRDAGYAGKLTVQ 184 Query: 190 PTSSVKRKGIE 200 S++KR G++ Sbjct: 185 LFSALKRTGLD 195 >gi|311109562|ref|YP_003982415.1| ribosome biogenesis GTP-binding protein [Achromobacter xylosoxidans A8] gi|310764251|gb|ADP19700.1| ribosome biogenesis GTP-binding protein [Achromobacter xylosoxidans A8] Length = 207 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 4/187 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + LP AG PE+ F GRSN GKS+ IN+L N++ LA +S PGRT+ +N F Sbjct: 9 FLTSAARLDQLPAAGAPEVCFVGRSNAGKSTAINVLCNQRRLAFSSKTPGRTRLINMFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + + ++ LVD+PGYGYA + + W ++ YL +R +L + LLID R G Sbjct: 69 PDPLDPEGHI--GFLVDLPGYGYASVARNEKEKWADILGGYLRDRESLVGIVLLIDIRRG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V ++D+ + +F+ +LTK DKL T+ + + + H IP S+ Sbjct: 127 VTELDRRLANFIAPTGRPVLALLTKADKLPYGQRMRTVFSVRKDLADIGALH--TIPFSA 184 Query: 194 VKRKGIE 200 +R G+E Sbjct: 185 PERIGLE 191 >gi|257457897|ref|ZP_05623056.1| ribosome biogenesis GTP-binding protein YsxC [Treponema vincentii ATCC 35580] gi|257444610|gb|EEV19694.1| ribosome biogenesis GTP-binding protein YsxC [Treponema vincentii ATCC 35580] Length = 218 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 23/206 (11%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV- 72 F++G P+ G PE AF GRSN GKSSLIN+L+NRKNL +T + PG T+ +NFF+ Sbjct: 9 FIKGAISSKQFPQTGVPEFAFFGRSNAGKSSLINMLLNRKNLVKTGSKPGMTREINFFIV 68 Query: 73 --PKDFSNLKNN-----------LPAMALVDMPGYGYARA--PKKN-VDSWGGLIVRYLS 116 P KNN L + D+PGYG+A+ P++N +D+ ++ Y + Sbjct: 69 NAPAKTCPEKNNTGVGAPQKNNALKVFTVADLPGYGFAQVSLPERNRIDT---MLYDYCT 125 Query: 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 RS L+ ++ L+D R ++++ +F ++ ++ + TK DK+S E ++ Sbjct: 126 TRSELKIMFFLMDIRREPTDVERNTLAFFREQGINTVLTATKADKVSK---NEQAKRITA 182 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + + ++ TSS K+ G E L Sbjct: 183 LASFFDCSKDSIVLTSSTKKTGRETL 208 >gi|183597074|ref|ZP_02958567.1| hypothetical protein PROSTU_00314 [Providencia stuartii ATCC 25827] gi|188023736|gb|EDU61776.1| hypothetical protein PROSTU_00314 [Providencia stuartii ATCC 25827] Length = 203 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LPK E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL +R ++ + +L+D RH Sbjct: 73 EE---------GIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRECIKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + + ++LTK DKL+ ++ L + + + EV S+ Sbjct: 124 LKDLDMQMIEWSIAMEIPVLVLLTKADKLASGARKKQLMEVRQALSPL-GGDVEVEYFSA 182 Query: 194 VKRKGIEVLR 203 +K+ GI+ LR Sbjct: 183 LKKIGIDKLR 192 >gi|330721713|gb|EGG99711.1| GTP-binding protein EngB [gamma proteobacterium IMCC2047] Length = 207 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 10/181 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS IN + LA+TS PGRTQ +NFF S + +VD Sbjct: 33 EVAFAGRSNAGKSSAINAIAQHGKLAKTSKTPGRTQLINFF-----STVSEQ---QRIVD 84 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P W I YL ERS+L+ ++L++D RH + D + S+ + + Sbjct: 85 LPGYGYAKVPLAVKRQWENFIDAYLRERSSLQGLFLIMDIRHPLTDFDSMILSWSKQSQL 144 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I+LTK DKL A+ TL K + +++ H V S+ ++ G++ R + E + Sbjct: 145 RVHILLTKADKLKFGAAKSTLLKVQRDLKDLD--HVSVQLFSATQKMGLDEARDKLSEWL 202 Query: 211 N 211 + Sbjct: 203 D 203 >gi|262273192|ref|ZP_06051008.1| GTP-binding protein EngB [Grimontia hollisae CIP 101886] gi|262222770|gb|EEY74079.1| GTP-binding protein EngB [Grimontia hollisae CIP 101886] Length = 217 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS IN L ++KNL +TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPPDTGIEVAFAGRSNAGKSSSINRLCDQKNLVKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ P + W + YL +R L+ + +L+D RH Sbjct: 72 DE---------GCHIVDLPGYGYAQVPLEMKKKWQKSLGEYLQKRDQLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++DQD+ + + +LTK DKL + L K + +++ EV SS Sbjct: 123 LKELDQDLIFWAVDCNLPVLALLTKCDKLKSGARKAELLKVREAAKDF-GGDVEVELFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR+ + Sbjct: 182 LKGIGVDKLRQKL 194 >gi|255322560|ref|ZP_05363705.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter showae RM3277] gi|255300468|gb|EET79740.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter showae RM3277] Length = 207 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 108/200 (54%), Gaps = 27/200 (13%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P+I L P A E+AF GRSNVGKSSLIN LVN+K+LA++S PG+T+ +NFF Sbjct: 9 FLISAPDISLAPPANSSEVAFLGRSNVGKSSLINTLVNQKSLAKSSLTPGKTRLINFFEV 68 Query: 74 KDFSNLKNNL-------PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 + +KN + VD+PG+GYA+ K W + YL R+ ++ Sbjct: 69 EYARGVKNEQGEPSEERANLTFVDLPGFGYAKVAKSMHAQWRKNLDEYLKFRANIKLFVH 128 Query: 127 LIDCRHGVKQIDQDVFSFL------DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LID R QID+DV +L D+K +++ LTK DKL+ + L + Sbjct: 129 LIDSRQFDMQIDRDVNDYLQSFLRPDQKILNF---LTKSDKLNQSQKSAVL-------KV 178 Query: 181 YPTAHPEVIPTSSVKRKGIE 200 YP AH S++K+ G+E Sbjct: 179 YPGAH----FVSALKKIGVE 194 >gi|89074465|ref|ZP_01160942.1| GTP-binding protein [Photobacterium sp. SKA34] gi|89049753|gb|EAR55303.1| GTP-binding protein [Photobacterium sp. SKA34] Length = 224 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 106/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPQDAGVEIAFAGRSNAGKSSALNRLTDQKGLARTSKTPGRTQLINMFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL R L+ + +L+D RH Sbjct: 72 VQGCN---------LIDLPGYGFAQVPLEMKLKWQKSLGEYLQRRECLQGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ + + ++LTK DKL + + K + + + +V SS Sbjct: 123 MKDLDQQMINWALESRLPVMVLLTKADKLKSGARKAQVLKIRQMTKEL-EGDVQVEAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++ +R+ + E Sbjct: 182 LKGIGVDQVRRKLDE 196 >gi|326435855|gb|EGD81425.1| hypothetical protein PTSG_02146 [Salpingoeca sp. ATCC 50818] Length = 528 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 10/181 (5%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G E+ F GRSNVGKSS+IN L R N ART + PG T+ +NF+ + S + Sbjct: 244 GVKEVCFIGRSNVGKSSVINAL-GRSNPARTEDKPGVTKTVNFYALEKSS--------VN 294 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD+PGYG+A A N + W + YLS+R+ LR +++L+D RHG+K+ID D L Sbjct: 295 VVDLPGYGFAFAKTDNQNEWQQTVEDYLSQRANLRRIFVLLDARHGLKRIDIDFLHRLQA 354 Query: 148 -KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 AV +Q+VLTK D + L + + P A +VI S+ G+ VLR+ + Sbjct: 355 TTAVPFQLVLTKCDLVPMDDIGRRLILLQQTLVELPGAIKDVITVSATSGAGMRVLRREV 414 Query: 207 L 207 + Sbjct: 415 M 415 >gi|294783777|ref|ZP_06749101.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 1_1_41FAA] gi|294480655|gb|EFG28432.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 1_1_41FAA] Length = 194 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 96/169 (56%), Gaps = 16/169 (9%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F KSA ++ + PE + E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 8 FVKSA-VYEKDYPE-----QLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++ Sbjct: 62 LINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFV 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ K Sbjct: 112 LLDIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIK 160 >gi|167571532|ref|ZP_02364406.1| GTPase EngB [Burkholderia oklahomensis C6786] Length = 219 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 98/191 (51%), Gaps = 9/191 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 10 FLTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL R LR + L++D R Sbjct: 70 GPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEQLLSTYLQTRPQLRGMILMMDSRRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA----HPEVI 189 + ++D+ + + +LTK DKL+ + L T+ + Y A V Sbjct: 125 LTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESTNALRATQKGLDAYRDAGYAGKLTVQ 184 Query: 190 PTSSVKRKGIE 200 S++KR G++ Sbjct: 185 LFSALKRTGLD 195 >gi|238855231|ref|ZP_04645550.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 269-3] gi|260664592|ref|ZP_05865444.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii SJ-7A-US] gi|282932475|ref|ZP_06337900.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 208-1] gi|313471946|ref|ZP_07812438.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 1153] gi|238832123|gb|EEQ24441.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 269-3] gi|239529126|gb|EEQ68127.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 1153] gi|260561657|gb|EEX27629.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii SJ-7A-US] gi|281303424|gb|EFA95601.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 208-1] Length = 195 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/138 (44%), Positives = 85/138 (61%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSSLIN +NRKNLARTS+ PG+TQ LNF+ D Sbjct: 19 PRDVLPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQTLNFYKVND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ KK + +G +I YL R+ L + ++ID RH D ++++ Sbjct: 70 SFYLVDVPGYGYAKVSKKQREQFGEMIQDYLETRANLEGLIIIIDARHEPTTDDIAMYNY 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 + +V TK+DKL Sbjct: 130 ALLLDLPILVVTTKMDKL 147 >gi|331005490|ref|ZP_08328868.1| GTP-binding protein EngB [gamma proteobacterium IMCC1989] gi|330420682|gb|EGG94970.1| GTP-binding protein EngB [gamma proteobacterium IMCC1989] Length = 208 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 10/191 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ ++ P A E+AF+GRSN GKSS IN L + K LARTS PGRTQ +N+F Sbjct: 11 VFLQSASKLSQCPTAITAEVAFAGRSNAGKSSAINTLTDNKKLARTSKTPGRTQLINYFS 70 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +LVD+PGYGYA+ P W + YL R L+ + LL+D RH Sbjct: 71 IN---------AEKSLVDLPGYGYAKVPISMKREWDKNLTEYLQSRDVLKGLVLLMDIRH 121 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPT 191 +++ D + + + +I+LTK DKL A+ TL K+L + V Sbjct: 122 PMQEFDTMMLNQAIDNEMPVRILLTKCDKLKKGPAKSTLLAVEKHLRESEVDDLVSVQLF 181 Query: 192 SSVKRKGIEVL 202 SS+K +G++ L Sbjct: 182 SSLKNEGVKEL 192 >gi|15617031|ref|NP_240244.1| GTPase EngB [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681783|ref|YP_002468169.1| hypothetical GTP-binding protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682338|ref|YP_002468722.1| hypothetical GTP-binding protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471485|ref|ZP_05635484.1| ribosome biogenesis GTP-binding protein YsxC [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|12644609|sp|P57507|ENGB_BUCAI RecName: Full=Probable GTP-binding protein EngB gi|254783188|sp|B8D9L0|ENGB_BUCA5 RecName: Full=Probable GTP-binding protein EngB gi|254783189|sp|B8D7W2|ENGB_BUCAT RecName: Full=Probable GTP-binding protein EngB gi|25306610|pir||B84980 hypothetical GTP-binding protein [imported] - Buchnera sp. (strain APS) gi|10039096|dbj|BAB13130.1| hypothetical GTP-binding protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622071|gb|ACL30227.1| hypothetical GTP-binding protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624626|gb|ACL30781.1| hypothetical GTP-binding protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086163|gb|ADP66245.1| ribosome biogenesis GTP-binding protein YsxC [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086735|gb|ADP66816.1| ribosome biogenesis GTP-binding protein YsxC [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087323|gb|ADP67403.1| ribosome biogenesis GTP-binding protein YsxC [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 205 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/194 (36%), Positives = 103/194 (53%), Gaps = 18/194 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ +I + EIAF G SN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 11 FLKSYSKITDIDIQNGIEIAFIGYSNTGKSSAINALTNQKKLARFSKTPGRTQLINFF-- 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGY++AP W + YL +R ++ LL+D R+ Sbjct: 69 -------EVVSGFRIVDLPGYGYSQAPLLVRSKWQKKVYDYLEKREQIKLFVLLMDIRYP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL----SPTTAQETLEKTKYLIRNYPTAHPEVI 189 +K++DQ + S +K +S ++LTK DK+ A +K L+ ++ E+I Sbjct: 122 LKKLDQKIISIAVQKKISILVLLTKCDKIKINHQKNQADMVFKKLNVLLDSF-----EII 176 Query: 190 PTSSVKRKGIEVLR 203 SS K+ GIE L+ Sbjct: 177 LFSSYKKIGIEKLK 190 >gi|241759405|ref|ZP_04757509.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria flavescens SK114] gi|241320187|gb|EER56520.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria flavescens SK114] Length = 213 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 101/194 (52%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 66 ----ELEN---GNFMVDLPGYGYAQVPEAIRTHWVKLLGDYLQQRRQLIGLILIMDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K +D + F I+L+K DKLS +TL K ++ Y V S Sbjct: 119 LKALDIQMLDFFHITGRPVHILLSKADKLSKNDQIKTLAAVKKSLKPYTERQKISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++G++ + + + Sbjct: 179 SLKKQGMDEVNQVV 192 >gi|258623133|ref|ZP_05718145.1| GTP-binding protein [Vibrio mimicus VM573] gi|258584616|gb|EEW09353.1| GTP-binding protein [Vibrio mimicus VM573] Length = 220 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 AEGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREDAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|284047886|ref|YP_003398225.1| ribosome biogenesis GTP-binding protein YsxC [Acidaminococcus fermentans DSM 20731] gi|283952107|gb|ADB46910.1| ribosome biogenesis GTP-binding protein YsxC [Acidaminococcus fermentans DSM 20731] Length = 209 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 4/160 (2%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN-- 82 P+ E+AF GRSNVGKSSL+N L RK LAR S++PG+TQ +NF+ + L++ Sbjct: 24 PQDTIDEVAFIGRSNVGKSSLLNSLARRKGLARVSSSPGKTQTINFYSFQAKRQLEDEPE 83 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 VD+PGYG+AR K N + W I +Y+ L+ V +L+D RH + D D + Sbjct: 84 RHTYYAVDLPGYGFARTSKGNKEQWSAFICKYMENSQYLKLVCVLMDIRHAPMESDIDCY 143 Query: 143 SFLDKKAVSYQIVLTKIDKLS--PTTAQETLEKTKYLIRN 180 +L + ++LTK DKLS +Q+ L K + +R+ Sbjct: 144 QWLLNLGLPIMVILTKSDKLSKGAVASQKALYKKTFGLRD 183 >gi|268679307|ref|YP_003303738.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurospirillum deleyianum DSM 6946] gi|268617338|gb|ACZ11703.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurospirillum deleyianum DSM 6946] Length = 200 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 72/192 (37%), Positives = 104/192 (54%), Gaps = 28/192 (14%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF------VPKDFSNLKN 81 G E+AF GRSNVGKSS+IN L N+K LA++S+ PG+T+ +NFF KDF+ Sbjct: 23 GLSEVAFIGRSNVGKSSIINALTNKKGLAKSSSTPGKTRLINFFNVLLSDEEKDFT---- 78 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PG+GYAR + W + +Y+ R ++R LID RH + D++V Sbjct: 79 ----LQFVDLPGFGYARVSHSMKEEWQKHLTQYIERRISIRVFVHLIDSRHPFLESDKEV 134 Query: 142 FSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++L+ Q +L TK DKL + + +NYP A I SS +KG Sbjct: 135 HAYLEGIVRPDQRILRIFTKADKLKQSDVS-------VIKKNYPDA----ILVSSSSKKG 183 Query: 199 IEVLRKAILETI 210 I+ KAI ET+ Sbjct: 184 IDRALKAIFETV 195 >gi|330444880|ref|ZP_08308535.1| cell division protein putative checkpoint GTPase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489190|dbj|GAA03032.1| cell division protein putative checkpoint GTPase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 221 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/195 (34%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + ++K+LARTS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPQDAGVEIAFAGRSNAGKSSALNRITDQKSLARTSKTPGRTQLINMFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL R L+ + +L+D RH Sbjct: 72 VSGCN---------LIDLPGYGFAQVPLEMKLKWQKSLGEYLQRRECLQGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + S+ + + ++LTK DKL + + K + + + +V SS Sbjct: 123 MKDLDQQMISWAIESRLPVLVLLTKADKLKSGARKAQVLKIRQMTAEF-GGDVQVEAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 +K G++ +R+ + E Sbjct: 182 LKGIGVDQVRRKLDE 196 >gi|312880131|ref|ZP_07739931.1| ribosome biogenesis GTP-binding protein YsxC [Aminomonas paucivorans DSM 12260] gi|310783422|gb|EFQ23820.1| ribosome biogenesis GTP-binding protein YsxC [Aminomonas paucivorans DSM 12260] Length = 208 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/184 (39%), Positives = 103/184 (55%), Gaps = 12/184 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P PEI +GRSNVGKSSLIN L+ K +A S PG+T+ +NFF D S Sbjct: 18 IPSLALPEIVIAGRSNVGKSSLINALLGAK-VAHVSGTPGKTRSINFF---DVSAT---- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYG+A +K SWG +I RY R + V L+D RHG+ D+ + S Sbjct: 70 PPFCLVDLPGYGFAARSRKERGSWGVVIERYFELRRAVLAVQ-LVDFRHGLLGNDRQLES 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 F + + +V TK+DK++PT L + Y + T V+ SS++R G+E L+ Sbjct: 129 FFEALNLPVCVVFTKVDKIAPTKRAAVL--SGYRREGFRTTLEPVL-VSSLRRDGLETLQ 185 Query: 204 KAIL 207 + IL Sbjct: 186 ETIL 189 >gi|160936364|ref|ZP_02083733.1| hypothetical protein CLOBOL_01256 [Clostridium bolteae ATCC BAA-613] gi|158440647|gb|EDP18385.1| hypothetical protein CLOBOL_01256 [Clostridium bolteae ATCC BAA-613] Length = 193 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/152 (40%), Positives = 91/152 (59%), Gaps = 9/152 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PE AF+G+SNVGKSSLIN L+NRK ARTS+ PG+TQ +NF+ N Sbjct: 18 LPENTLPEFAFAGKSNVGKSSLINALMNRKAYARTSSQPGKTQTINFY---------NIN 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A+ VD+PGYGYA+ + WG +I RYL L+ V+LLID RH D+ ++ Sbjct: 69 GALYYVDLPGYGYAKIAVAVKEKWGKMIERYLRNSQMLKMVFLLIDIRHEPSANDKLMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 ++ I+ TK+DK++ + Q+ ++ + Sbjct: 129 WIIFNGYHPVIIATKLDKINRSQVQKHVKMVR 160 >gi|294866649|ref|XP_002764793.1| multidrug resistance protein, putative [Perkinsus marinus ATCC 50983] gi|239864540|gb|EEQ97510.1| multidrug resistance protein, putative [Perkinsus marinus ATCC 50983] Length = 2239 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 103/175 (58%), Gaps = 9/175 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+A GRSN GKS+L+N L R+N ++TS PG T+ L F+ P + LV Sbjct: 1521 PEVAVVGRSNCGKSTLVNTLAGRQN-SKTSKIPGSTESLLFWK-------MGKPPVLMLV 1572 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A ++ W L + YLS RS L+ V +L+D R G+ Q D+++ SFL++ Sbjct: 1573 DLPGYGFAYQGEEKRTEWTELSLFYLSHRSNLKRVLVLVDARRGLMQSDREMISFLERYG 1632 Query: 150 VSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 V +Q+++TK D L P A+ + + L + + +IP S++ ++G++ LR Sbjct: 1633 VKWQVIVTKCDLLKPRFLAKRLVIMQQILDTEFKGSVGPMIPLSALAKQGVDELR 1687 >gi|254524566|ref|ZP_05136621.1| GTP-binding protein [Stenotrophomonas sp. SKA14] gi|219722157|gb|EED40682.1| GTP-binding protein [Stenotrophomonas sp. SKA14] Length = 200 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 93/183 (50%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF Sbjct: 20 LPPDEGAEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFF---------QIT 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P W I RY R L+ + +++D RH +K D+ + S Sbjct: 71 PDAHLVDLPGYGYAKVPLDLQAHWQAFIDRYFRTREALKGLVVVMDIRHPLKDYDRQMLS 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKLS + +TL+K + + + V S R G++ R Sbjct: 131 YAVQRGMPAHALLTKADKLSRSQQMQTLQKVRKELHSAYGDSVSVQVFSGEDRTGVDEAR 190 Query: 204 KAI 206 I Sbjct: 191 GVI 193 >gi|262066526|ref|ZP_06026138.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium periodonticum ATCC 33693] gi|291379760|gb|EFE87278.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium periodonticum ATCC 33693] Length = 194 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 23/207 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F KSA ++ + PE + E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 8 FIKSA-VYEKDYPE-----QLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++ Sbjct: 62 LINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFV 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTA 184 L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ KT+ + Sbjct: 112 LLDIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLIF-----E 166 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETIN 211 +V SS+ KG + + + E +N Sbjct: 167 KEDVFFHSSLTNKGRDEILTFMEEKLN 193 >gi|329124154|ref|ZP_08252701.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus aegyptius ATCC 11116] gi|327467579|gb|EGF13077.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus aegyptius ATCC 11116] Length = 205 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 9/153 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I +P+ EIAF+GRSN GKS+ +N L N+KNL RTS PGRTQ +N F Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLTRTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 E---------PNYKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +K +DQ + + + ++LTK DKLS + Sbjct: 124 LKDLDQQMIEWAVSANLPILLLLTKADKLSQSA 156 >gi|260767539|ref|ZP_05876475.1| GTP-binding protein EngB [Vibrio furnissii CIP 102972] gi|260617439|gb|EEX42622.1| GTP-binding protein EngB [Vibrio furnissii CIP 102972] Length = 224 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPTDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + W + YL +R+ L+ + +L+D RH Sbjct: 72 TEGCH---------IVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRTCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + +V SS Sbjct: 123 MKDLDQQLVVWAVECGIPVQVLLTKADKLKSGARKAQVLKVREAALAF-GGDVQVDAFSS 181 Query: 194 VKRKGIEVLR 203 G++VLR Sbjct: 182 HNGIGVDVLR 191 >gi|320537214|ref|ZP_08037179.1| ribosome biogenesis GTP-binding protein YsxC [Treponema phagedenis F0421] gi|320145945|gb|EFW37596.1| ribosome biogenesis GTP-binding protein YsxC [Treponema phagedenis F0421] Length = 212 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 12/204 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-- 71 F++G + P PE AF GRSNVGKSSLIN+LVNRKNL +T + PG T+ +NFF Sbjct: 10 FIKGAVKPEQYPSLPVPEFAFFGRSNVGKSSLINMLVNRKNLVKTGSRPGMTREVNFFLV 69 Query: 72 -----VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 VP K N+ ALVD+PGYGYA+ + ++ Y + R L+ ++ Sbjct: 70 NRPSAVPVSEIAGKKNI--FALVDLPGYGYAKVSGGVIQKIDSMLYDYCTNRQNLQTIFF 127 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID R +I+++ +F + IV TK DKL + T+ + + Sbjct: 128 LIDMRREPGEIEKNSIAFFQSYNIKVVIVGTKADKLKKNDLAKV---TRNWVDFFSVDAE 184 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 +IP+S+ K+ G E + + E + Sbjct: 185 SIIPSSASKKLGKERILACVEEQL 208 >gi|319639426|ref|ZP_07994176.1| GTP-binding protein engB [Neisseria mucosa C102] gi|317399321|gb|EFV79992.1| GTP-binding protein engB [Neisseria mucosa C102] Length = 213 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 101/194 (52%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 66 ----ELEN---GNFMVDLPGYGYAQVPEAIRAHWVKLLGDYLQQRRQLIGLILIMDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K +D + F I+L+K DKLS +TL K ++ Y V S Sbjct: 119 LKALDIQMLDFFHITGRPVHILLSKADKLSKNDQIKTLAAVKKSLKPYTDRQKISVQLFS 178 Query: 193 SVKRKGIEVLRKAI 206 S+K++G++ + + + Sbjct: 179 SLKKQGMDEVNQVV 192 >gi|33594513|ref|NP_882157.1| GTPase EngB [Bordetella pertussis Tohama I] gi|33594785|ref|NP_882428.1| GTPase EngB [Bordetella parapertussis 12822] gi|33599057|ref|NP_886617.1| GTPase EngB [Bordetella bronchiseptica RB50] gi|81578317|sp|Q7VTA1|ENGB_BORPE RecName: Full=Probable GTP-binding protein EngB gi|81578960|sp|Q7W2C4|ENGB_BORPA RecName: Full=Probable GTP-binding protein EngB gi|81580336|sp|Q7WR92|ENGB_BORBR RecName: Full=Probable GTP-binding protein EngB gi|33564589|emb|CAE43906.1| putative GTP-binding protein [Bordetella pertussis Tohama I] gi|33564861|emb|CAE39805.1| putative GTP-binding protein [Bordetella parapertussis] gi|33575103|emb|CAE30566.1| putative GTP-binding protein [Bordetella bronchiseptica RB50] gi|332383924|gb|AEE68771.1| ribosome biogenesis GTP-binding protein YsxC [Bordetella pertussis CS] Length = 207 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/177 (37%), Positives = 97/177 (54%), Gaps = 4/177 (2%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP AG PE+ F GRSN GKSS IN+L N++ LA +S PGRT+ +N F D L Sbjct: 19 LPPAGAPEVCFVGRSNAGKSSAINVLCNQRRLAFSSKTPGRTRLINMFGLPD--PLAPGE 76 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA + + W ++ YL +R++L + LLID R GV +D+ + + Sbjct: 77 QLGFLVDLPGYGYASVAHREKEKWADILGGYLRDRASLAGIVLLIDIRRGVTDLDRRLTN 136 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 F+ +LTK DKL T+ + + + H ++P SS +R G+E Sbjct: 137 FIAPTGRPVLALLTKADKLPYGQRMRTVFAVRKDLADIGALH--MVPFSSTERIGLE 191 >gi|182417604|ref|ZP_02948926.1| GTP-binding protein [Clostridium butyricum 5521] gi|237668408|ref|ZP_04528392.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378559|gb|EDT76088.1| GTP-binding protein [Clostridium butyricum 5521] gi|237656756|gb|EEP54312.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 198 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/180 (40%), Positives = 99/180 (55%), Gaps = 15/180 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P E+AF GRSNVGKSS+IN L NRK LA+ S PG+T+ +NFF L NN Sbjct: 19 PLDNRNEVAFVGRSNVGKSSIINSLTNRKKLAKVSGTPGKTRLVNFF-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K DSWG I YL+ER L+ + LL+D RH K D+ + Sbjct: 70 DFYLVDLPGYGYAKVSKSEKDSWGKTIEMYLTEREQLKRIVLLVDSRH--KPTGDDILMY 127 Query: 145 LDKKAVSYQIVL--TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 K Y +V+ TK DKL + ++ + K ++ + SS+ ++GIE L Sbjct: 128 EWAKHFGYDVVVVATKSDKLKNSEFKKNEKIIKETLK--LKEEDKFYFFSSLNKRGIETL 185 >gi|239814137|ref|YP_002943047.1| ribosome biogenesis GTP-binding protein YsxC [Variovorax paradoxus S110] gi|239800714|gb|ACS17781.1| GTP-binding protein HSR1-related [Variovorax paradoxus S110] Length = 247 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 99/189 (52%), Gaps = 13/189 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP PEIAF GRSN GKS+ IN L + LA S PGRTQH+N Sbjct: 39 FLTSAPQLEHLPPLDLPEIAFVGRSNAGKSTAINTLTQQTRLAFASKTPGRTQHINL--- 95 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F K L D+PGYGYA PK+ W ++ YL R LR V L+ D RHG Sbjct: 96 --FGVGKQKADDAVLADLPGYGYAAVPKEAKLRWQRVMGNYLMTRENLRGVVLMCDPRHG 153 Query: 134 VKQIDQ---DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ DV ++ + + ++LTK DKL+ + + L T+ EV Sbjct: 154 MTELDEILLDVIRPRVEQGLKFLVLLTKADKLTRSEGAKVLSITR-----LQAGGGEVKL 208 Query: 191 TSSVKRKGI 199 S++K++G+ Sbjct: 209 FSALKKQGV 217 >gi|254520127|ref|ZP_05132183.1| GTPase EngB [Clostridium sp. 7_2_43FAA] gi|226913876|gb|EEH99077.1| GTPase EngB [Clostridium sp. 7_2_43FAA] Length = 201 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/155 (43%), Positives = 86/155 (55%), Gaps = 12/155 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PEIAF GRSNVGKSS+IN L NRK LA+ S PG+T+ +NFF+ N Sbjct: 20 PITGLPEIAFVGRSNVGKSSIINALTNRKKLAKVSQTPGKTRLINFFII--------NGD 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K SWG I YL+ R L+ V LL+D RH D + + Sbjct: 72 EFYLVDLPGYGYAKVSKTEKASWGKTIETYLNGRQELKRVVLLVDSRHKPTADDIQMHEW 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + ++ TK DKLS L K++ +IR Sbjct: 132 IKFYGYDEVVIATKSDKLS----NNELRKSEKVIR 162 >gi|157373117|ref|YP_001481106.1| ribosome biogenesis GTP-binding protein YsxC [Serratia proteamaculans 568] gi|166920114|sp|A8GLI8|ENGB_SERP5 RecName: Full=Probable GTP-binding protein EngB gi|157324881|gb|ABV43978.1| GTP-binding protein HSR1-related [Serratia proteamaculans 568] Length = 216 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPGDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL R+ L+ + +L+D RH Sbjct: 73 EE---------GIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 124 LKDLDQQMIQWAVEVGTPVLLLLTKADKLASGARKAQLNMVREAVVPF-MGDIQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 K+ G++ L + + Sbjct: 183 PKKIGVDKLSQKL 195 >gi|262404848|ref|ZP_06081402.1| GTP-binding protein EngB [Vibrio sp. RC586] gi|262348932|gb|EEY98071.1| GTP-binding protein EngB [Vibrio sp. RC586] Length = 220 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + W + YL R L+ + +L+D RH Sbjct: 72 AEGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQRRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREDAKQF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILE 208 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDE 196 >gi|114330261|ref|YP_746483.1| GTPase EngB [Nitrosomonas eutropha C91] gi|122314688|sp|Q0AJF3|ENGB_NITEC RecName: Full=Probable GTP-binding protein EngB gi|114307275|gb|ABI58518.1| cell division checkpoint GTPase YihA [Nitrosomonas eutropha C91] Length = 223 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 99/188 (52%), Gaps = 12/188 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V I LP+A EIAF+GRSN GKSS IN LV R A TS PGRTQH+NFF Sbjct: 11 FYTTVNHIKDLPQATGVEIAFAGRSNAGKSSAINTLVGRGRFAFTSKTPGRTQHINFFQL 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ P W L+ YL R L + L++D RH Sbjct: 71 GE---------ERFMVDLPGYGYAQVPLAIRQHWVHLLSTYLQTRQALYGMILIMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTAHPEVIPTS 192 + ++D + + + ++LTK DKLS + A L++ + +L +Y ++ S Sbjct: 122 LTKLDLQMLEWFAQTGKLVHVLLTKADKLSRSKALAVLDEIRQFLSTSYSGCTVQIF--S 179 Query: 193 SVKRKGIE 200 S+ +G E Sbjct: 180 SLTSEGAE 187 >gi|256028618|ref|ZP_05442452.1| GTP-binding protein [Fusobacterium sp. D11] gi|289766536|ref|ZP_06525914.1| GTP-binding protein [Fusobacterium sp. D11] gi|289718091|gb|EFD82103.1| GTP-binding protein [Fusobacterium sp. D11] Length = 194 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 23/207 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F KSA ++ + PE + E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 8 FIKSA-VYEKDYPE-----QLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQ 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++ Sbjct: 62 LINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KIVFV 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTA 184 L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ KT+ + N Sbjct: 112 LLDIRRVPSDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRLVFDN---- 167 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETIN 211 +V S++ KG + + + E +N Sbjct: 168 -EDVFFHSALTNKGRDEILDFMEEKLN 193 >gi|167748794|ref|ZP_02420921.1| hypothetical protein ANACAC_03568 [Anaerostipes caccae DSM 14662] gi|167651764|gb|EDR95893.1| hypothetical protein ANACAC_03568 [Anaerostipes caccae DSM 14662] Length = 204 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 101/176 (57%), Gaps = 13/176 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +N++ N+ L Sbjct: 18 LPDNELPEVAFAGKSNVGKSSLINALMNRKSYARVSAQPGKTQTINYY------NINEEL 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ + + WG +I RYL L+ V+LLID RH + D ++ Sbjct: 72 ---YYVDLPGYGYAKVTESVKEQWGAMIERYLHTSKQLKLVFLLIDIRHKPSKNDVMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIPTSSVKRKG 198 ++ I+ TK DKL + + +++ + +R N T V P SS+ ++G Sbjct: 129 WIVHNGYHPVIIATKSDKLKRSQLPKHVKEIRQELRLNKETP---VFPFSSLSKQG 181 >gi|258626623|ref|ZP_05721453.1| GTP-binding protein [Vibrio mimicus VM603] gi|258581127|gb|EEW06046.1| GTP-binding protein [Vibrio mimicus VM603] Length = 219 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 AEGCH---------IVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREDAKQF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLR 203 + G++ LR Sbjct: 182 LSGIGVDTLR 191 >gi|224540965|ref|ZP_03681504.1| hypothetical protein CATMIT_00116 [Catenibacterium mitsuokai DSM 15897] gi|224526116|gb|EEF95221.1| hypothetical protein CATMIT_00116 [Catenibacterium mitsuokai DSM 15897] Length = 197 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 103/186 (55%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE+ +GRSNVGKSS IN + N + LA+ S+ PG+T+ LNFF N+ + L Sbjct: 20 PDESLPEVVMAGRSNVGKSSFINTVTNVQGLAKVSSTPGKTRTLNFF------NINDEL- 72 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ PKK ++ + +I YL R L+ + L++D RH K D ++ + Sbjct: 73 --RLVDVPGYGYAKVPKKMLEQFSEMIDNYLRNRKNLKAMILIVDYRHKPKDDDVTMYDY 130 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVL 202 A+ +V TK DKL + L K + LI+ P + SS+K+KG+ + Sbjct: 131 AKHFAIPVIVVATKEDKLK----RNELVKNEKLIKETLDFDPNDHFVRFSSLKKKGVREV 186 Query: 203 RKAILE 208 ILE Sbjct: 187 WDCILE 192 >gi|325265778|ref|ZP_08132465.1| ribosome biogenesis GTP-binding protein YsxC [Kingella denitrificans ATCC 33394] gi|324982761|gb|EGC18386.1| ribosome biogenesis GTP-binding protein YsxC [Kingella denitrificans ATCC 33394] Length = 220 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 98/188 (52%), Gaps = 11/188 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDTAA-EIAFVGRSNAGKSSAINALCNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + SN +VD+PGYGYA+ P+ W L+ YL R +L + L++D RH Sbjct: 66 -ELSN------GHFMVDLPGYGYAQVPEAIRAHWVKLLGDYLQTRPSLLGLVLIMDIRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-S 192 +K +D + F + I+L+K DKLS +TL K ++ + + S Sbjct: 119 LKPLDIQMLDFFAQTERPVHILLSKADKLSKNEQIKTLSSVKKALKPFTERQTVTVQLFS 178 Query: 193 SVKRKGIE 200 S+K++GIE Sbjct: 179 SLKKQGIE 186 >gi|229496828|ref|ZP_04390537.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas endodontalis ATCC 35406] gi|229316239|gb|EEN82163.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas endodontalis ATCC 35406] Length = 198 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 12/200 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFV 72 F++ ++ P++ PE AF GRSNVGKSSLIN+L LA TS+ PG+TQ +N F + Sbjct: 8 FVKSSAQLDQCPESKLPEYAFIGRSNVGKSSLINMLTGHTKLAMTSSKPGKTQLINHFLI 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 KD+ LVD+PGYGYA K+ ++ +I Y+ R L +++L+D R Sbjct: 68 NKDWH----------LVDLPGYGYAARNKEQRLAFRRMIEGYILGRKQLINLFILVDSRL 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++ID + + + V IV+TKIDKLS QE++++ + + P TS Sbjct: 118 EPQKIDLEFIQQMGEAGVPLSIVMTKIDKLSRPKLQESIKRYQETLSEEWDELPPFFYTS 177 Query: 193 SVKRKGIEVLRKAILETINY 212 S K G E L + I ETIN+ Sbjct: 178 SEKATGREELLQYI-ETINH 196 >gi|199598205|ref|ZP_03211627.1| Predicted GTPase [Lactobacillus rhamnosus HN001] gi|229552143|ref|ZP_04440868.1| GTPase [Lactobacillus rhamnosus LMS2-1] gi|258508348|ref|YP_003171099.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus rhamnosus GG] gi|258539557|ref|YP_003174056.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus rhamnosus Lc 705] gi|199590966|gb|EDY99050.1| Predicted GTPase [Lactobacillus rhamnosus HN001] gi|229314445|gb|EEN80418.1| GTPase [Lactobacillus rhamnosus LMS2-1] gi|257148275|emb|CAR87248.1| GTP-binding protein engB [Lactobacillus rhamnosus GG] gi|257151233|emb|CAR90205.1| GTP-binding protein engB [Lactobacillus rhamnosus Lc 705] gi|259649662|dbj|BAI41824.1| putative GTPase [Lactobacillus rhamnosus GG] Length = 199 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 103/186 (55%), Gaps = 13/186 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIAF GRSNVGKSSLIN L+ RK +ARTS+ PG+TQ LNF+ +L + L Sbjct: 19 PEDGRPEIAFLGRSNVGKSSLINKLIKRKAMARTSSVPGKTQTLNFY------DLDSRL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K + +I YL+ R LR V LL+D RH D ++ + Sbjct: 72 --FFVDVPGYGYAKVSKSARAKFAAMIETYLTTRQPLRGVVLLVDSRHEPTADDISMYQY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVKRKGIEVLR 203 L + +V TKIDK T + L K + + + VIP S+V +G + + Sbjct: 130 LKYYQLRTLVVATKIDK---TPKSKRLHVVKQINQRLDLNQTDTVIPFSAVTGEGYDAIW 186 Query: 204 KAILET 209 + +T Sbjct: 187 SWLSQT 192 >gi|302380199|ref|ZP_07268671.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna ACS-171-V-Col3] gi|302311982|gb|EFK93991.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna ACS-171-V-Col3] Length = 201 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 9/141 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIAF GRSNVGKSS IN +++RKNLARTS+ PG+T+ +NF+ N Sbjct: 19 PDESLPEIAFCGRSNVGKSSFINSILDRKNLARTSSKPGKTRTVNFY---------NANN 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K W +I YL+ R L V+L++D RH D++++++ Sbjct: 70 EFRLVDLPGYGYAQTSKSEKKKWAQVIETYLNNRRNLYEVFLIVDIRHKPTVQDKEMYNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPT 165 + + ++ TK+DK+ T Sbjct: 130 IIQSGFCGFVIATKLDKIGKT 150 >gi|269215622|ref|ZP_06159476.1| ribosome biogenesis GTP-binding protein YsxC [Slackia exigua ATCC 700122] gi|269131109|gb|EEZ62184.1| ribosome biogenesis GTP-binding protein YsxC [Slackia exigua ATCC 700122] Length = 201 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 100/191 (52%), Gaps = 18/191 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P + PEI F+GRSNVGKSSL+N L NRK LA+ S PG+T +NFF +D Sbjct: 18 IPLSLRPEIVFAGRSNVGKSSLLNRLFNRKRLAKVSQTPGKTAAVNFFTAED-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYG+A+ K + W L+ Y V L+D RH +D + Sbjct: 70 --ADFVDLPGYGFAKVSKAEIARWRRLMSAYFESDRRFALVVSLVDIRHPATALDVQMIE 127 Query: 144 FLDKKAVSYQIVLTKIDKLSPT---TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 FL + + + IVLTK DKLS + +A L + L + P VI SS K GI+ Sbjct: 128 FLIRYDLPFVIVLTKADKLSRSKAFSAVSALRRQLGLGADIP-----VIACSSEKGTGID 182 Query: 201 VLRKAILETIN 211 L+ + ++++ Sbjct: 183 ALKALMQDSVH 193 >gi|270265260|ref|ZP_06193522.1| probable GTP-binding protein EngB [Serratia odorifera 4Rx13] gi|270040894|gb|EFA13996.1| probable GTP-binding protein EngB [Serratia odorifera 4Rx13] Length = 215 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPGDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL R+ L+ + +L+D RH Sbjct: 73 EE---------GIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++LTK DKL+ + L + + + +V SS Sbjct: 124 LKDLDQQMIQWAVDVGTPVLVLLTKADKLASGARKAQLNMVREAVVPF-MGDIQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 K+ G++ L + + Sbjct: 183 PKKIGVDKLSQKL 195 >gi|317470367|ref|ZP_07929758.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes sp. 3_2_56FAA] gi|316902171|gb|EFV24094.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes sp. 3_2_56FAA] Length = 204 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 101/176 (57%), Gaps = 13/176 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +N++ N+ L Sbjct: 18 LPDNEFPEVAFAGKSNVGKSSLINALMNRKSYARVSAQPGKTQTINYY------NINEEL 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ + + WG +I RYL L+ V+LLID RH + D ++ Sbjct: 72 ---YYVDLPGYGYAKVTESVKEQWGAMIERYLHTSKQLKLVFLLIDIRHKPSKNDVMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIPTSSVKRKG 198 ++ I+ TK DKL + + +++ + +R N T V P SS+ ++G Sbjct: 129 WIVHNGYHPVIIATKSDKLKRSQLPKHVKEIRQELRLNKETP---VFPFSSLSKQG 181 >gi|169350156|ref|ZP_02867094.1| hypothetical protein CLOSPI_00898 [Clostridium spiroforme DSM 1552] gi|169292939|gb|EDS75072.1| hypothetical protein CLOSPI_00898 [Clostridium spiroforme DSM 1552] Length = 199 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 72/186 (38%), Positives = 101/186 (54%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+ +GRSNVGKSS IN ++NR LA+ S+ PG+T+ LNFF D Sbjct: 20 PQETYPEMCLAGRSNVGKSSFINAMLNRNGLAKVSSTPGKTRTLNFFNVND--------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYGYA+ +G + Y+ RS+L+ LL+D RH + D ++ F Sbjct: 71 ALYFVDVPGYGYAKVNNNVTKQFGKTMDEYIKLRSSLKGFILLVDYRHKPTKDDVMMYEF 130 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVL 202 + V +V TK DKL + L+K + LI+N H E I SS+K+ GIE Sbjct: 131 VKHHNVPVIVVATKEDKLK----RNDLKKNEQLIKNTLGFHKEDKFIRFSSLKKIGIEEA 186 Query: 203 RKAILE 208 AI E Sbjct: 187 WNAIYE 192 >gi|315178731|gb|ADT85645.1| GTPase EngB [Vibrio furnissii NCTC 11218] Length = 224 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 104/190 (54%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPTDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +VD+PGYG+A+ P + W + YL +R+ L+ + +L+D RH Sbjct: 72 TEGCH---------IVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRTCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + +V SS Sbjct: 123 MKDLDQQLVVWAVECGIPVQVLLTKADKLKSGARKAQVLKIREAALAF-GGDVQVDAFSS 181 Query: 194 VKRKGIEVLR 203 G++VLR Sbjct: 182 HNGIGVDVLR 191 >gi|300309494|ref|YP_003773586.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] gi|300072279|gb|ADJ61678.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] Length = 246 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 103/208 (49%), Gaps = 14/208 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV- 72 F V + LPK PEIAF+GRSN GKSS IN+L N+K LA S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPKTSVPEIAFAGRSNAGKSSAINVLCNQKRLAFASKTPGRTQHINYFSI 68 Query: 73 -------PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 ++ + + AM LVD+PGYGYA W L+ Y+ +R L + Sbjct: 69 GGAHVGQHRNDEARPDEIRAM-LVDLPGYGYAEVSGSAKHHWQALLGDYVRQREQLAALV 127 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +++D R +D + + +L+K DKL+ + L + + +++Y Sbjct: 128 MIVDSRRPFTDLDIQMIEWFAPTGKPIHCILSKADKLNRNESTNALRQAQTYLQSYVDEK 187 Query: 186 PEVIP-----TSSVKRKGIEVLRKAILE 208 + P S++KR G+E ILE Sbjct: 188 GQPFPFTAQLFSALKRIGLEEANDKILE 215 >gi|116494828|ref|YP_806562.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei ATCC 334] gi|191638335|ref|YP_001987501.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei BL23] gi|239631580|ref|ZP_04674611.1| GTPase EngB [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066389|ref|YP_003788412.1| putative GTPase [Lactobacillus casei str. Zhang] gi|122263754|sp|Q039K2|ENGB_LACC3 RecName: Full=Probable GTP-binding protein EngB gi|238693035|sp|B3WE42|ENGB_LACCB RecName: Full=Probable GTP-binding protein EngB gi|116104978|gb|ABJ70120.1| Predicted GTPase [Lactobacillus casei ATCC 334] gi|190712637|emb|CAQ66643.1| Probable GTP-binding protein engB [Lactobacillus casei BL23] gi|239526045|gb|EEQ65046.1| GTPase EngB [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438796|gb|ADK18562.1| Predicted GTPase [Lactobacillus casei str. Zhang] gi|327382363|gb|AEA53839.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei LC2W] gi|327385563|gb|AEA57037.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei BD-II] Length = 198 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 64/137 (46%), Positives = 82/137 (59%), Gaps = 9/137 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIAF GRSNVGKSSLIN L+ RK +ARTS PG+TQ LNF+ +L + L Sbjct: 19 PEDGHPEIAFLGRSNVGKSSLINKLIQRKAMARTSGVPGKTQTLNFY------DLDSRL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K + +I YL+ R LR V LL+D RH D ++ + Sbjct: 72 --FFVDVPGYGYAKVSKTARAKFAAMIETYLTTRQPLRGVVLLVDSRHEPTADDISMYQY 129 Query: 145 LDKKAVSYQIVLTKIDK 161 L + +V TKIDK Sbjct: 130 LKYYQLRTLVVATKIDK 146 >gi|237727065|ref|ZP_04557546.1| GTPase EngB [Bacteroides sp. D4] gi|229433921|gb|EEO43998.1| GTPase EngB [Bacteroides dorei 5_1_36/D4] Length = 200 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 106/189 (56%), Gaps = 17/189 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P+ PE AF GRSNVGKSSLIN+L R LA TS+ PG+T +N F + K++ Sbjct: 19 PQDNLPEYAFIGRSNVGKSSLINMLTKRPKLAMTSSTPGKTLLINHFLINKEW------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA KK V+ +I Y+ ER + +++LIDCR ++ID + Sbjct: 72 ---YLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDCRLEPQKIDLEFME 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +L + V + I+ TK DKL+ ++ + K K L + P + +SS K+ G Sbjct: 129 WLGENGVPFSIIFTKADKLTNGKVKDNVNKYLKKLTEQWEELPPHFV-SSSEKKTG---- 183 Query: 203 RKAILETIN 211 R+ IL+ I+ Sbjct: 184 RQEILDYID 192 >gi|307566351|ref|ZP_07628790.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella amnii CRIS 21A-A] gi|307344928|gb|EFN90326.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella amnii CRIS 21A-A] Length = 201 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 103/198 (52%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + P PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTISSPTVFKCPNDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA++ K + +I +Y+ +R L V++LID RH Sbjct: 68 N---------KEWYLVDLPGYGYAKSSKSVRNKLEQMIAQYILQRKQLINVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ID++ +L K + + I+ TK DKL+ A+ + + P TS+ Sbjct: 119 QQTIDREFVDWLGKSNIPFSIIFTKADKLTTGKAKSNALLWMRKLEDTWEELPPYFITSA 178 Query: 194 VKRKGIEVLRKAILETIN 211 K+ G E + I E+IN Sbjct: 179 EKKTGKEEVLNYI-ESIN 195 >gi|50118987|ref|YP_048154.1| ribosome biogenesis GTP-binding protein YsxC [Pectobacterium atrosepticum SCRI1043] gi|81646696|sp|Q6DB76|ENGB_ERWCT RecName: Full=Probable GTP-binding protein EngB gi|49609513|emb|CAG72946.1| probable GTP-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 211 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I L E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 12 FIISAPDIRHLETDNGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFQV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P++ W + YL +R++L+ + +L+D RH Sbjct: 72 AE---------GVRLVDLPGYGYAEVPEQMKIKWQRALGEYLQKRNSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 123 LKDLDQQMILWAVDVKLPVLVLLTKADKLASGARKAQLNMVREAVLPF-MGDIQVEAFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ L++ + Sbjct: 182 LKKIGVDKLQQKL 194 >gi|330999051|ref|ZP_08322775.1| ribosome biogenesis GTP-binding protein YsxC [Parasutterella excrementihominis YIT 11859] gi|329575638|gb|EGG57169.1| ribosome biogenesis GTP-binding protein YsxC [Parasutterella excrementihominis YIT 11859] Length = 213 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 3/200 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ V E+ LP+ PEIAF+GRSN GKS+ IN+L + LA +S PGRTQ LNFF Sbjct: 10 FVMSVSELMGLPETELPEIAFAGRSNAGKSTTINVLCRQSRLAFSSKTPGRTQLLNFFEL 69 Query: 74 KDFSNL-KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +P LVD+PGYGYA+A + +W GL+ Y+ +R L + L++D R Sbjct: 70 SLKGEIPRQRIPECFLVDLPGYGYAKAAPETRKNWAGLVGGYVQQRPQLMGMVLVMDARR 129 Query: 133 GVKQIDQDVFSFLD-KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 D+ + FL + + ++L K D+L ++ L K H V Sbjct: 130 PFMPADEFLLDFLSVRPDLKLHLLLNKADQLKTMEKRQVLNAVKDRALTMGN-HVSVQLF 188 Query: 192 SSVKRKGIEVLRKAILETIN 211 S +K++G+E L+ + +N Sbjct: 189 SGLKKEGVEQLQNVLCTWLN 208 >gi|225076958|ref|ZP_03720157.1| hypothetical protein NEIFLAOT_02010 [Neisseria flavescens NRL30031/H210] gi|224951711|gb|EEG32920.1| hypothetical protein NEIFLAOT_02010 [Neisseria flavescens NRL30031/H210] Length = 231 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 101/194 (52%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 27 FFTTVNHLKDLPDT-PAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFF-- 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+N +VD+PGYGYA+ P+ W L+ YL +R L + L++D RH Sbjct: 84 ----ELEN---GNFMVDLPGYGYAQVPEAIRAHWVKLLGDYLQQRRQLIGLILIMDSRHP 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K +D + F I+L+K DKLS +TL K ++ Y V S Sbjct: 137 LKALDIQMLDFFHITGRPVHILLSKADKLSKNDQIKTLAAVKKSLKPYTERQKISVQLFS 196 Query: 193 SVKRKGIEVLRKAI 206 S+K++G++ + + + Sbjct: 197 SLKKQGMDEVNQVV 210 >gi|323705915|ref|ZP_08117486.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacterium xylanolyticum LX-11] gi|323534713|gb|EGB24493.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacterium xylanolyticum LX-11] Length = 200 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 96/178 (53%), Gaps = 16/178 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G +IA GRSNVGKSS IN +VNR N AR S PG+TQ +NF++ + Sbjct: 19 PNDGLKQIAVIGRSNVGKSSFINAIVNRNNFARVSQKPGKTQGINFYIVNN--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-- 142 LVD+PGYGYA K+ W I YL+ + L +L+D RH K D DV Sbjct: 70 TFYLVDLPGYGYAEVSKELKKQWSINIETYLNTSAYLVGAIMLVDIRH--KPTDDDVLMV 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++L + +++Q+V TK DKL Q +L K + ++IP SS+K+ G++ Sbjct: 128 NYLKNRNINFQVVATKSDKLKRYEMQMSL---KVISDTLSVDKEKIIPFSSLKKAGVD 182 >gi|251777864|ref|ZP_04820784.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082179|gb|EES48069.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 198 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 76/182 (41%), Positives = 98/182 (53%), Gaps = 19/182 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P E+AF GRSNVGKSSLIN L NRK LA+ S PG+T+ +NFF L NN Sbjct: 19 PTDNRNEVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRLINFF-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K D+WG I YLS R L+ + L+D RH K D+ + Sbjct: 70 DFYLVDLPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRH--KPTGDDIMMY 127 Query: 145 LDKKAVSYQIVL--TKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIE 200 K Y +V+ TK DKL +K++ LIR+ T + SS+ +KG E Sbjct: 128 EWAKHFGYDVVIVATKSDKLK----NAEFKKSEKLIRDTLKLTKDDKFYFYSSLNKKGTE 183 Query: 201 VL 202 L Sbjct: 184 EL 185 >gi|226227819|ref|YP_002761925.1| putative GTP-binding protein EngB [Gemmatimonas aurantiaca T-27] gi|259645897|sp|C1AB49|ENGB_GEMAT RecName: Full=Probable GTP-binding protein EngB gi|226091010|dbj|BAH39455.1| putative GTP-binding protein EngB [Gemmatimonas aurantiaca T-27] Length = 204 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 100/189 (52%), Gaps = 12/189 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P+ PEIAF GRSNVGKSSL+N L+ RK+ AR S PGRT+ ++FF D ++ Sbjct: 17 GWRPEITLPEIAFVGRSNVGKSSLLNKLMRRKSFARVSTTPGRTREIHFF---DVNH--- 70 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L D+PGYGYAR K+ W LI YL L+ V L+D RH D + Sbjct: 71 ---QFVLADLPGYGYARISKERKAEWRPLIEGYLGTSPRLQGVVQLLDVRHDPTNDDYVM 127 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 FL V + +TKIDKL P A+ +E+ L + +V+P S+ G + Sbjct: 128 MDFLADVGVPTIVAITKIDKLKPAQARARVEE---LSKRLGLDADQVVPFSAHTGAGRDE 184 Query: 202 LRKAILETI 210 L A+++ + Sbjct: 185 LASALMQLL 193 >gi|264676794|ref|YP_003276700.1| ferrous iron transporter B [Comamonas testosteroni CNB-2] gi|262207306|gb|ACY31404.1| ferrous iron transport protein B [Comamonas testosteroni CNB-2] Length = 231 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F ++ LPK PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N F Sbjct: 16 FFTTAAQLNQLPKVEVPEIAFVGRSNAGKSTAINTLTQQKQLAFASKKPGRTQHINLFAL 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K + L D+PGYGYA + + + W +++ YL R +L V LL D R G Sbjct: 76 G-----KQGVTDAVLADLPGYGYAAVSRTDKERWQRVMLNYLMSRESLSAVVLLCDPRLG 130 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ + + ++ + + IVLTK DKL+ + L TK EV Sbjct: 131 LTELDEALLDAIRPRVEQGLKFLIVLTKADKLTRAEQAKILSITK-----LNAGGGEVRL 185 Query: 191 TSSVKRKGIE 200 S++K++G++ Sbjct: 186 FSALKKQGVD 195 >gi|242242937|ref|ZP_04797382.1| GTPase [Staphylococcus epidermidis W23144] gi|242233538|gb|EES35850.1| GTPase [Staphylococcus epidermidis W23144] gi|319400989|gb|EFV89208.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909] Length = 195 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 62/171 (36%), Positives = 98/171 (57%), Gaps = 11/171 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 21 PDTGLTEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH + D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTEDDVLMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 L + ++ TK DK++ Q+ +++ K + P + +I SS+K Sbjct: 132 LKHFDIPTLVICTKEDKIAKGKVQKHIKRIKDKLELEPGDN--IISYSSIK 180 >gi|189190794|ref|XP_001931736.1| GTP-binding protein engB [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973342|gb|EDU40841.1| GTP-binding protein engB [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 307 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 104/190 (54%), Gaps = 27/190 (14%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVN---RKNLARTSNAPGRTQHLNF 70 LR V + L P++ PE+AF GRSNVGKSSL+N LVN + LARTS PG T+ N Sbjct: 41 LLRSVAQFRLFPESDVPEVAFVGRSNVGKSSLLNTLVNADIKALLARTSATPGFTKTTNL 100 Query: 71 FV--PKDFSNLKNNLPA---------MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 + P + +K + +VDMPGYG ++ +WG I++Y+ R Sbjct: 101 YGLGPGNGVTIKQQPDGRDKIVGKNGLTIVDMPGYGEG-----SLAAWGTEILKYIQNRK 155 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 LR V++LID +HGVK D+ + + L VS+Q++L+K+DK+ A+E I+ Sbjct: 156 QLRRVFVLIDAQHGVKDKDRSLLATLRLSGVSHQVILSKLDKIFIPQAKE--------IK 207 Query: 180 NYPTAHPEVI 189 Y P V+ Sbjct: 208 RYDGKSPRVL 217 >gi|225434365|ref|XP_002276707.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 573 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 71/175 (40%), Positives = 102/175 (58%), Gaps = 11/175 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF+GRSNVGKSS++N L + + RTS+ PG TQ +NFF L + L +LV Sbjct: 397 PEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KLGSKL---SLV 447 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A ++ DSW L+ Y+S R L+ V LLID + G+K D ++ +++ Sbjct: 448 DLPGYGFAYAKEEVKDSWEELVKEYVSTRIGLKRVCLLIDTKWGMKPRDHELIDLMERAQ 507 Query: 150 VSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 YQI+LTK D + P A+ ++ + L N P ++ SS GI LR Sbjct: 508 TKYQILLTKTDLVFPIDVARRAMQIEESLKANKSIVQP-LMMVSSKSGAGIPSLR 561 >gi|255610864|ref|XP_002539243.1| GTP-binding protein engB, putative [Ricinus communis] gi|223507802|gb|EEF23140.1| GTP-binding protein engB, putative [Ricinus communis] Length = 211 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 98/185 (52%), Gaps = 9/185 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP A E+AF+GRSN GKSS +N L N LA S PGRTQ +NFF D +L Sbjct: 19 LPPASGIEVAFAGRSNAGKSSALNTLANHNRLAFVSKQPGRTQLINFFTLGDDKHL---- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ P+ W ++ RYLSER +L + L++D RH + +D+ + Sbjct: 75 -----VDLPGYGYAKVPEAMRMHWQNVLSRYLSERQSLAGLVLVMDSRHPLTPLDRQMLD 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++LTK DKLS + + L K + + V SS+K+ G++ Sbjct: 130 WFCPSGKPVHVLLTKSDKLSRSESTILLGKVRKELHTGWGEKITVQLFSSLKKLGVDEAE 189 Query: 204 KAILE 208 K + E Sbjct: 190 KVLGE 194 >gi|212694988|ref|ZP_03303116.1| hypothetical protein BACDOR_04525 [Bacteroides dorei DSM 17855] gi|237710675|ref|ZP_04541156.1| GTPase EngB [Bacteroides sp. 9_1_42FAA] gi|265750348|ref|ZP_06086411.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_33FAA] gi|212662441|gb|EEB23015.1| hypothetical protein BACDOR_04525 [Bacteroides dorei DSM 17855] gi|229455397|gb|EEO61118.1| GTPase EngB [Bacteroides sp. 9_1_42FAA] gi|263237244|gb|EEZ22694.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_33FAA] Length = 200 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 106/189 (56%), Gaps = 17/189 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P+ PE AF GRSNVGKSSLIN+L R LA TS+ PG+T +N F + K++ Sbjct: 19 PQDNLPEYAFIGRSNVGKSSLINMLTKRPKLAMTSSTPGKTLLINHFLINKEW------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA KK V+ +I Y+ ER + +++LIDCR ++ID + Sbjct: 72 ---YLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDCRLEPQKIDLEFME 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +L + V + I+ TK DKL+ ++ + K K L + P + +SS K+ G Sbjct: 129 WLGENGVPFSIIFTKADKLTNGKVKDNVNKYLKKLTEQWEELPPHFV-SSSEKKTG---- 183 Query: 203 RKAILETIN 211 R+ IL+ I+ Sbjct: 184 RQEILDYID 192 >gi|256426042|ref|YP_003126695.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588] gi|256040950|gb|ACU64494.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588] Length = 202 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 100/187 (53%), Gaps = 13/187 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L N + LA+TS PG+TQ +N F+ Sbjct: 19 PTPNLPEYAFIGRSNVGKSSLINMLANNEKLAKTSGTPGKTQLINHFLING--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYG+A+ + SW +I YL +R L +++LID RH +++D + + Sbjct: 70 SWYLVDLPGYGFAKVSQSQRRSWEQMIENYLRKRENLVNIFVLIDSRHTPQKLDIEFINQ 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + + +V TK DK + ++ +R P TS+VK+ G R Sbjct: 130 LGEWQIPFALVFTKADKSTQAETSRNIKAFLNKLRETWEFLPAHFVTSTVKKMG----RD 185 Query: 205 AILETIN 211 AIL I+ Sbjct: 186 AILSFID 192 >gi|254788440|ref|YP_003075869.1| ribosome biogenesis GTP-binding protein YsxC [Teredinibacter turnerae T7901] gi|259645908|sp|C5BJZ8|ENGB_TERTT RecName: Full=Probable GTP-binding protein EngB gi|237684556|gb|ACR11820.1| putative GTP-binding protein [Teredinibacter turnerae T7901] Length = 214 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 103/201 (51%), Gaps = 12/201 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + P E+AF+GRSN GKSS IN L N LARTS PGRTQ +NFF Sbjct: 11 FLISAPSLRECPAEEGAEVAFAGRSNAGKSSAINCLTNNGKLARTSKTPGRTQLINFFSL 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ P W + YL +R LR + LL+D RH Sbjct: 71 GQGAQQR-------LVDLPGYGYAKVPLATKREWQAHLSEYLYKRKCLRGLVLLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 +++ D + ++ + ++LTK DKL A TL + ++ + +++ Sbjct: 124 MQEFDTMMLNWAVDANMPVHLLLTKSDKLKRGAANNTLLQVNRSLKE--SGVQDLVSAQI 181 Query: 192 -SSVKRKGIEVLRKAILETIN 211 SS+K G++ L + I +N Sbjct: 182 FSSLKNVGVQQLEQVITGWLN 202 >gi|163942217|ref|YP_001647101.1| GTPase EngB [Bacillus weihenstephanensis KBAB4] gi|229807533|sp|A9VIU3|ENGB_BACWK RecName: Full=Probable GTP-binding protein EngB gi|163864414|gb|ABY45473.1| small GTP-binding protein [Bacillus weihenstephanensis KBAB4] Length = 198 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 85/151 (56%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ + Sbjct: 19 PDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLINEM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ K +WG +I Y + R+ L L++D RH + D ++ F Sbjct: 71 -MHFVDVPGYGYAKVSKTERAAWGRMIETYFTTRTQLDAAVLVVDLRHQPTKDDIMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + I+ TK DK+ Q+ L+ K Sbjct: 130 LKHYEIPTIIIATKADKIPKGKWQKHLKVVK 160 >gi|323489957|ref|ZP_08095178.1| GTP-binding protein [Planococcus donghaensis MPA1U2] gi|323396253|gb|EGA89078.1| GTP-binding protein [Planococcus donghaensis MPA1U2] Length = 193 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE A +GRSNVGKSS IN ++ RK++AR S+ PG+TQ LNF+ ++ Sbjct: 19 PEDGLPEFALAGRSNVGKSSFINKMIGRKSMARISSKPGKTQTLNFYKIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K ++WG +I RY+++R LR V ++D RH + D ++ F Sbjct: 70 KLFYVDVPGYGYAKVSKSEREAWGKMIERYITDREPLRAVIQIVDLRHPPSKDDIAMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 + + I+ TK DK+ Sbjct: 130 MKHFEIPCIIIATKADKI 147 >gi|304316363|ref|YP_003851508.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777865|gb|ADL68424.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 200 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 16/178 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G +IA GRSNVGKSS IN +VNRKN AR S PG+TQ +NF+ L NN Sbjct: 19 PDDGLTQIAVIGRSNVGKSSFINTIVNRKNFARVSQKPGKTQGINFY-------LVNN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-- 142 + LVD+PGYGYA K+ W I YL+ L+ +L+D RH K D DV Sbjct: 70 SFYLVDLPGYGYAEVSKEMKKQWSINIETYLNVSEYLKGAIMLVDIRH--KPTDDDVLMM 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++L + ++Y +V TK DKL+ Q +L + +++P SS+K+ G++ Sbjct: 128 NYLKHRNLNYVVVATKSDKLNRQEIQRSLN---VISETLEVDKGKIVPFSSLKKTGVD 182 >gi|150005485|ref|YP_001300229.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus ATCC 8482] gi|254884036|ref|ZP_05256746.1| GTPase EngB [Bacteroides sp. 4_3_47FAA] gi|294778688|ref|ZP_06744107.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus PC510] gi|319640710|ref|ZP_07995424.1| GTP-binding protein engB [Bacteroides sp. 3_1_40A] gi|166225943|sp|A6L4J3|ENGB_BACV8 RecName: Full=Probable GTP-binding protein EngB gi|149933909|gb|ABR40607.1| putative GTP-binding protein [Bacteroides vulgatus ATCC 8482] gi|254836829|gb|EET17138.1| GTPase EngB [Bacteroides sp. 4_3_47FAA] gi|294447344|gb|EFG15925.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus PC510] gi|317387672|gb|EFV68537.1| GTP-binding protein engB [Bacteroides sp. 3_1_40A] Length = 200 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 106/189 (56%), Gaps = 17/189 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P+ PE AF GRSNVGKSSLIN+L R LA TS+ PG+T +N F + K++ Sbjct: 19 PQDNLPEYAFIGRSNVGKSSLINMLAKRPKLAMTSSTPGKTLLINHFLINKEW------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA KK V+ +I Y+ ER + +++LIDCR ++ID + Sbjct: 72 ---YLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDCRLEPQKIDLEFME 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +L + V + I+ TK DKL+ ++ + K K L + P + +SS K+ G Sbjct: 129 WLGENGVPFSIIFTKADKLTNGKVKDNVNKYLKKLTEQWEELPPHFV-SSSEKKTG---- 183 Query: 203 RKAILETIN 211 R+ IL+ I+ Sbjct: 184 RQEILDYID 192 >gi|303256479|ref|ZP_07342493.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderiales bacterium 1_1_47] gi|302859970|gb|EFL83047.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderiales bacterium 1_1_47] Length = 237 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 13/205 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ V E+ LP+ PEIAF+GRSN GKS+ IN+L + LA +S PGRTQ LNFF Sbjct: 34 FVMSVSELMGLPETELPEIAFAGRSNAGKSTTINVLCRQSRLAFSSKTPGRTQLLNFFEL 93 Query: 74 KDFSNL-KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +P LVD+PGYGYA+A + +W GL+ Y+ +R L + L++D R Sbjct: 94 SLKGEIPRQRIPECFLVDLPGYGYAKAAPETRRNWEGLVGGYVQQRPQLMGMVLVMDARR 153 Query: 133 GVKQIDQDVFSFLD-KKAVSYQIVLTKIDKLSPTTAQETLEKTKYL--IRNYPTA---HP 186 D+ + FL + + ++L K D+L +T+EK + L +++ A H Sbjct: 154 PFMPADEFLLDFLSVRPDLKLHLLLNKADQL------KTMEKRQVLNTVKDRALAMGNHV 207 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 V S +K++G+E L+ + +N Sbjct: 208 SVQLFSGLKKEGVEQLQNVLCTWLN 232 >gi|119943997|ref|YP_941677.1| GTPase EngB [Psychromonas ingrahamii 37] gi|166225972|sp|A1SRG3|ENGB_PSYIN RecName: Full=Probable GTP-binding protein EngB gi|119862601|gb|ABM02078.1| cell division checkpoint GTPase YihA [Psychromonas ingrahamii 37] Length = 218 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 14/197 (7%) Query: 14 FLRGVPEIGLLPKAGPPE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I L K PPE IAF+GRSN GKSS +N L +K LARTS PGRTQ +N Sbjct: 13 FLISAPDIRHLDKHLPPESGIEIAFAGRSNAGKSSALNRLTRQKGLARTSKTPGRTQLIN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F ++ L+D+PGYG+A+ P W + YL ER +L+ + +L+D Sbjct: 73 VFEIEE---------GKRLIDLPGYGFAKVPLAMKLKWQKSLGEYLQERESLKGLVVLMD 123 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R K++DQ + + + +LTK DKL + TL K + +N+ +V Sbjct: 124 IRQPFKELDQQLIYWAIDADIPVLALLTKADKLKQGARKTTLLKMREEAKNF-EGDVQVE 182 Query: 190 PTSSVKRKGIEVLRKAI 206 SS+K G+E+L + + Sbjct: 183 LFSSLKGIGLEMLEQKV 199 >gi|320539309|ref|ZP_08038979.1| ribosome biogenesis GTP-binding protein [Serratia symbiotica str. Tucson] gi|320030701|gb|EFW12710.1| ribosome biogenesis GTP-binding protein [Serratia symbiotica str. Tucson] Length = 213 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 FVTSAPDIRHLPGDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD+PGYGYA P++ W + YL R+ L+ + +L+D RH Sbjct: 64 EE---------GHRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++LTK DKL+ + L + + + +V S+ Sbjct: 115 LKDLDQQMIQWAVDVGTPVLVLLTKADKLASGARKAQLNMVREAVLPF-MGDIQVEAFSA 173 Query: 194 VKRKGIEVLRKAI 206 K+ G++ L + + Sbjct: 174 TKKIGVDKLSQKL 186 >gi|225430037|ref|XP_002284246.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296081893|emb|CBI20898.3| unnamed protein product [Vitis vinifera] Length = 307 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 75/193 (38%), Positives = 101/193 (52%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 120 PSDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRIND--------- 170 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA AP++ W Y RSTL V+LL+D K+ID + S+ Sbjct: 171 SWYLVDLPGYGYAAAPQELRTDWNKFTKDYFQSRSTLVSVFLLVDASIPAKKIDLEYASW 230 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + + ++ TK DK +E +E + LIR++ P I TSSV +G Sbjct: 231 LGENQIPMTLIFTKCDKRKKKKNGGKRPEENVEDFQGLIRDFFQTAPPWIMTSSVSNQGR 290 Query: 200 EVLRKAILETINY 212 + + + + NY Sbjct: 291 DEILLHMAQLRNY 303 >gi|323143398|ref|ZP_08078083.1| ribosome biogenesis GTP-binding protein YsxC [Succinatimonas hippei YIT 12066] gi|322416803|gb|EFY07452.1| ribosome biogenesis GTP-binding protein YsxC [Succinatimonas hippei YIT 12066] Length = 215 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 10/191 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I +P EIAF+GRSN GKSS IN + ++K+LA+TS+ PGRT+ +N F Sbjct: 17 FVTSAPDIRQMPPDNGIEIAFAGRSNSGKSSSINAICDQKHLAKTSSTPGRTRLINLFAV 76 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N LVD+PGYGYA P+ W + YL +R LR + + +D RH Sbjct: 77 Q-----ANKF----LVDLPGYGYAAVPEAMKKQWQKSMSEYLQKRKALRGIVITMDIRHP 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + I+LTK DKL + L++ K L+ + + VIP S+ Sbjct: 128 LKDHDRLILDWSTAANLPAIILLTKADKLGVNARSKALKEVKLLLSEFDGSF-TVIPFSA 186 Query: 194 VKRKGIEVLRK 204 + G++ RK Sbjct: 187 WRGIGVDETRK 197 >gi|239616939|ref|YP_002940261.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1] gi|259645901|sp|C5CEL1|ENGB_KOSOT RecName: Full=Probable GTP-binding protein EngB gi|239505770|gb|ACR79257.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1] Length = 190 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 106/186 (56%), Gaps = 12/186 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P+ E+AF+GRSNVGKS+L+N L RK LA TS+ PG+T+ +NF++ Sbjct: 16 GDYPEPVKREVAFAGRSNVGKSTLLNTLFQRK-LAHTSSKPGKTRSINFYLVNS------ 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 VD+PGYG+A A K+ + W LI Y S R L V +L+D RH +++ D + Sbjct: 69 ---KYYFVDLPGYGFASASKQELARWKELIEDYFSTRDNLNLVTILMDSRHPMQKNDYKM 125 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ ++ + +VLTK DKLS ++ ++ + ++ + P +IP S+ R+G+ Sbjct: 126 LEWIKDYSIPFIVVLTKTDKLSGNELKKMIQIYEKELKLW--GSPPIIPFSAKTRRGLNE 183 Query: 202 LRKAIL 207 L K ++ Sbjct: 184 LLKILI 189 >gi|119899112|ref|YP_934325.1| ribosome biogenesis GTP-binding protein YsxC [Azoarcus sp. BH72] gi|166225940|sp|A1K9D3|ENGB_AZOSB RecName: Full=Probable GTP-binding protein EngB gi|119671525|emb|CAL95438.1| conserved hypothetical GTP-binding protein [Azoarcus sp. BH72] Length = 209 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 95/183 (51%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP EIAF+GRSN GKSS IN L LA S PGRTQ +NFF + N Sbjct: 19 LPPPNGAEIAFAGRSNAGKSSAINTLAGHVRLAYVSKTPGRTQLINFF--------RLNC 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A+ LVD+PGYGYA P+K W GLI YL R +L + L++D RH + +D+ + Sbjct: 71 GAL-LVDLPGYGYAAVPEKIRRQWQGLIETYLRTRESLIGLVLMMDSRHPMTDLDRQMID 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++LTK DKLS A TL + + V SS+K+ G+E + Sbjct: 130 WFAPSGKPIHVLLTKSDKLSRGPANATLLAVRAELTARYGDQVSVQLFSSLKKTGVEEVE 189 Query: 204 KAI 206 K + Sbjct: 190 KVV 192 >gi|221069072|ref|ZP_03545177.1| GTP-binding protein HSR1-related [Comamonas testosteroni KF-1] gi|220714095|gb|EED69463.1| GTP-binding protein HSR1-related [Comamonas testosteroni KF-1] Length = 265 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F ++ LPK PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N F Sbjct: 40 FFTTAAQLNQLPKVDVPEIAFVGRSNAGKSTAINTLTQQKQLAFASKKPGRTQHINLFAL 99 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K + L D+PGYGYA + + + W +++ YL R +L V LL D R G Sbjct: 100 G-----KQGVTDAVLADLPGYGYAAVSRTDKERWQRVMLNYLMSRESLSAVVLLCDPRLG 154 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ + + ++ + + IVLTK DKL+ + L TK EV Sbjct: 155 LTELDEALLDAIRPRVEQGLKFLIVLTKADKLTRAEQAKILSITK-----LNAGGGEVRL 209 Query: 191 TSSVKRKGIE 200 S++K++G++ Sbjct: 210 FSALKKQGVD 219 >gi|299529616|ref|ZP_07043053.1| ribosome biogenesis GTP-binding protein YsxC [Comamonas testosteroni S44] gi|298722479|gb|EFI63399.1| ribosome biogenesis GTP-binding protein YsxC [Comamonas testosteroni S44] Length = 241 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F ++ LPK PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N F Sbjct: 16 FFTTAAQLNQLPKVDVPEIAFVGRSNAGKSTAINTLTQQKQLAFASKKPGRTQHINLFAL 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K + L D+PGYGYA + + + W +++ YL R +L V LL D R G Sbjct: 76 G-----KQGVTDAVLADLPGYGYAAVSRTDKERWQRVMLNYLMSRESLSAVVLLCDPRLG 130 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ + + ++ + + IVLTK DKL+ + L TK EV Sbjct: 131 LTELDEALLDAIRPRVEQGLKFLIVLTKADKLTRAEQAKILSITK-----LNAGGGEVRL 185 Query: 191 TSSVKRKGIE 200 S++K++G++ Sbjct: 186 FSALKKQGVD 195 >gi|283853460|ref|ZP_06370703.1| small GTP-binding protein [Desulfovibrio sp. FW1012B] gi|283571133|gb|EFC19150.1| small GTP-binding protein [Desulfovibrio sp. FW1012B] Length = 209 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 80/138 (57%), Gaps = 8/138 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P P+IA +GRSNVGKS+L+N L RK LA+ S PG+T+ LNF+ + Sbjct: 25 IPVVAEPQIALAGRSNVGKSTLVNCLAGRKGLAKISATPGKTRSLNFY--------QARA 76 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYAR D W LI YLS+ LR V L+DCR +++D ++ Sbjct: 77 TGYCLVDLPGYGYARCSMAERDKWAKLIEAYLSKTDQLRAVVALVDCRLPPQRLDIELVD 136 Query: 144 FLDKKAVSYQIVLTKIDK 161 +L + + +VLTK DK Sbjct: 137 WLRARRIPMIMVLTKADK 154 >gi|254443449|ref|ZP_05056925.1| GTPase, putative [Verrucomicrobiae bacterium DG1235] gi|198257757|gb|EDY82065.1| GTPase, putative [Verrucomicrobiae bacterium DG1235] Length = 216 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P++ PE+AF GRSNVGKSSL+N+L +K+LA+ S PG T+ LNFF Sbjct: 8 FLTSAKDLEDCPRSSLPEVAFIGRSNVGKSSLVNMLTKQKSLAKVSKKPGATKLLNFFTM 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N LVD+PGYG+A+ K + + YL R+ L+ + L+D R+ Sbjct: 68 NKWWN---------LVDLPGYGFAQVSKGKQVDFNEAVSGYLMGRTQLKLICALVDARNE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++D ++L+ V + IV TK D+ + ++ + + PE+IP SS Sbjct: 119 PMELDLGFLNWLEDCPVPHVIVFTKTDEEQEDIWRRNMDIYQETLEALELRVPEMIPCSS 178 Query: 194 VKRKGIEVLRKAI 206 V R G VL + I Sbjct: 179 VDRAGRGVLLQYI 191 >gi|30022557|ref|NP_834188.1| GTPase EngB [Bacillus cereus ATCC 14579] gi|206969843|ref|ZP_03230797.1| GTP-binding protein [Bacillus cereus AH1134] gi|218232512|ref|YP_002369276.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus B4264] gi|296504960|ref|YP_003666660.1| GTPase EngB [Bacillus thuringiensis BMB171] gi|81837282|sp|Q817Q5|ENGB_BACCR RecName: Full=Probable GTP-binding protein EngB gi|226741191|sp|B7HEA1|ENGB_BACC4 RecName: Full=Probable GTP-binding protein EngB gi|29898115|gb|AAP11389.1| GTP-binding protein [Bacillus cereus ATCC 14579] gi|206735531|gb|EDZ52699.1| GTP-binding protein [Bacillus cereus AH1134] gi|218160469|gb|ACK60461.1| GTP-binding protein [Bacillus cereus B4264] gi|296326012|gb|ADH08940.1| GTPase EngB [Bacillus thuringiensis BMB171] Length = 198 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ + Sbjct: 19 PDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLINEM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ F Sbjct: 71 -MHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTSDDVMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + I+ TK DK+ Q+ L+ K Sbjct: 130 LKHYEIPTIIIATKADKIPKGKWQKHLKVVK 160 >gi|227535176|ref|ZP_03965225.1| GTPase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187221|gb|EEI67288.1| GTPase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 198 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 9/137 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PEIAF GRSNVGKSSLIN L+ RK +ARTS PG+TQ LNF+ +L + L Sbjct: 19 PEDGHPEIAFLGRSNVGKSSLINKLIQRKAMARTSGVPGKTQTLNFY------DLDSRL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K + +I YL+ R LR + LL+D RH D ++ + Sbjct: 72 --FFVDVPGYGYAKVSKTARAKFAAMIETYLTTRQPLRGIVLLVDSRHEPTADDISMYQY 129 Query: 145 LDKKAVSYQIVLTKIDK 161 L + +V TKIDK Sbjct: 130 LKYYQLRTLVVATKIDK 146 >gi|300690191|ref|YP_003751186.1| probable GTP-binding protein engB [Ralstonia solanacearum PSI07] gi|299077251|emb|CBJ49877.1| probable GTP-binding protein engB [Ralstonia solanacearum PSI07] Length = 233 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 10/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA +S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYF-- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K P LVD+PGYGYA P + W L+ Y+ R L + +++D R Sbjct: 67 -SVMPAKAEDPLGFLVDLPGYGYAEVPGEAKSHWEHLLGDYIQTRPQLAGLIIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE------ 187 +D + + ++LTK DKL+ A L + ++ Y A E Sbjct: 126 FTDLDCQMVEWFLLTGKPIHVLLTKADKLTNNDASRALMSARKVLAGY-RAQIEGDVSLT 184 Query: 188 VIPTSSVKRKGIEVLRKAI 206 V SS+KR+GIE ++ + Sbjct: 185 VQLFSSLKRRGIEEAQRMV 203 >gi|257091947|ref|YP_003165588.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044471|gb|ACV33659.1| GTP-binding protein HSR1-related [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 234 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 102/194 (52%), Gaps = 12/194 (6%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F ++A F V ++ LP E+AF+GRSN GKSS IN L N LA S PGRT Sbjct: 3 LFQQAA--FHTTVADLRDLPSDSLCEVAFAGRSNAGKSSAINTLANHSRLAFVSKTPGRT 60 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 QHLN+F D VD+PGYG+A+AP++ W GL+ YL R LR + Sbjct: 61 QHLNYFRLAD---------GKYFVDLPGYGFAKAPEEIRSQWEGLLAPYLRHREVLRGLV 111 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 L++D RH + ++D + + ++L+K DKL+ L + +++ + + Sbjct: 112 LIMDSRHPLTELDVQMLRWFAPTGKPLHVLLSKADKLTRQEQVLALREVHAVLQEF-GEN 170 Query: 186 PEVIPTSSVKRKGI 199 V SS+K+ G+ Sbjct: 171 GSVQLFSSLKKSGV 184 >gi|218899637|ref|YP_002448048.1| GTP-binding protein [Bacillus cereus G9842] gi|226741192|sp|B7IIY0|ENGB_BACC2 RecName: Full=Probable GTP-binding protein EngB gi|218541402|gb|ACK93796.1| GTP-binding protein [Bacillus cereus G9842] gi|326942248|gb|AEA18144.1| GTPase EngB [Bacillus thuringiensis serovar chinensis CT-43] Length = 198 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ + Sbjct: 19 PDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLINEM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ F Sbjct: 71 -MHFVDVPGYGYAKVSKSERAAWGKMIETYFTTRKQLDAAVLVVDLRHQPTSDDVMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + I+ TK DK+ Q+ L+ K Sbjct: 130 LKHYEIPTIIIATKADKIPKGKWQKHLKVVK 160 >gi|261344430|ref|ZP_05972074.1| ribosome biogenesis GTP-binding protein YsxC [Providencia rustigianii DSM 4541] gi|282567333|gb|EFB72868.1| ribosome biogenesis GTP-binding protein YsxC [Providencia rustigianii DSM 4541] Length = 204 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LPK E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL +R ++ + +L+D RH Sbjct: 73 EE---------GIRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRECIKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + ++ ++LTK DKL+ ++ L + + EV S+ Sbjct: 124 LKDLDMQMVEWSVAMSIPVLVLLTKADKLASGARKKQLMDVRQALAPL-NGDIEVEYFSA 182 Query: 194 VKRKGIEVLR 203 K+ GI+ LR Sbjct: 183 PKKIGIDKLR 192 >gi|168047724|ref|XP_001776319.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672279|gb|EDQ58818.1| predicted protein [Physcomitrella patens subsp. patens] Length = 222 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 99/202 (49%), Gaps = 18/202 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P G PE A GRSNVGKSSLIN LV RK LA+TS PG+TQ +N F+ Sbjct: 25 FIKSSSKESECPSEGYPEFALVGRSNVGKSSLINSLVLRKELAQTSKKPGKTQLINHFLI 84 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYG+A+AP W Y +R TL CV LL+D Sbjct: 85 NK---------KWYLVDLPGYGFAKAPTAVRTDWNEFTKDYFLQRETLACVLLLVDASIE 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAH--P 186 +QID D +L + + IV TK D+ QE +E +L R P P Sbjct: 136 PQQIDLDCVDWLGRNKIPVTIVFTKCDRKKKKKNGGRKPQENIE--DFLDRLKPLYDEIP 193 Query: 187 EVIPTSSVKRKGIEVLRKAILE 208 + TSS +G E L + I + Sbjct: 194 PWVMTSSATNQGREELLRHIAQ 215 >gi|189347671|ref|YP_001944200.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium limicola DSM 245] gi|238692196|sp|B3EGV8|ENGB_CHLL2 RecName: Full=Probable GTP-binding protein EngB gi|189341818|gb|ACD91221.1| GTP-binding protein HSR1-related [Chlorobium limicola DSM 245] Length = 192 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 17/178 (9%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F + V + LP+ PEI F GRSNVGKSSL+N L K LA+TS+ PG+T+ +N+F Sbjct: 7 VFYKSVSALTGLPEETFPEIVFVGRSNVGKSSLLNSLTGVKGLAKTSSTPGKTRLINYF- 65 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + N+ VD+PGYGYA WG L+V Y+ +R + V +L+D RH Sbjct: 66 -----QINGNI---YFVDLPGYGYAAVGHAEKAHWGNLLVSYIEKRRAIALVLVLVDSRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP---TTAQETLE----KTKYLIRNYPT 183 D+++ +FL+ Y I++TK DKL+ A+ +E K K+++ NY + Sbjct: 118 PAMASDREMMAFLEYLDRPYGIIMTKDDKLTQKERAAARREMESFSAKAKFIV-NYSS 174 >gi|303235063|ref|ZP_07321687.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna BVS033A4] gi|302493918|gb|EFL53700.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna BVS033A4] Length = 201 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 9/147 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIAF GRSNVGKSS IN +++RKNLAR S+ PG+T+ +NF+ N Sbjct: 19 PDESLPEIAFCGRSNVGKSSFINSILDRKNLARISSKPGKTRTVNFY---------NANN 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K W +I YL+ R L V+L++D RH D++++++ Sbjct: 70 EFRLVDLPGYGYAQTSKSEKKKWAQVIETYLNNRRNLYEVFLIVDIRHKPTVQDKEMYNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETL 171 + + ++ TK+DK+ T ++ L Sbjct: 130 IIQSGFCGFVIATKLDKIGKTMIKKNL 156 >gi|330940305|ref|XP_003305941.1| hypothetical protein PTT_18921 [Pyrenophora teres f. teres 0-1] gi|311316819|gb|EFQ85963.1| hypothetical protein PTT_18921 [Pyrenophora teres f. teres 0-1] Length = 980 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 100/170 (58%), Gaps = 19/170 (11%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVN---RKNLARTSNAPGRTQHLNF 70 LR + + L P++ PE+AF GRSNVGKSSL+N LVN R LARTS PG T+ +N Sbjct: 285 LLRSMAQFRLFPESDVPEVAFVGRSNVGKSSLLNTLVNADIRALLARTSATPGFTKTMNL 344 Query: 71 FV--PKDFSNLKNNLPA---------MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 + P + +K + +VDMPGYG + ++ +WG I++Y+ R Sbjct: 345 YGLGPGNGVTIKQQPDGRDKIVGKNGLTIVDMPGYG-----EGSLAAWGTEILKYIQNRK 399 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 LR V++LID +HGVK D+ + + L VS+Q++L+K+DK+ A+E Sbjct: 400 QLRRVFVLIDAQHGVKDKDRSLLATLRLSGVSHQVILSKLDKIFIPQAKE 449 >gi|223557993|gb|ACM90999.1| GTP-binding cell division protein [uncultured bacterium URE4] Length = 198 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 95/188 (50%), Gaps = 16/188 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN L LA+TS PG+TQ +N F+ D Sbjct: 19 PARKLPEFAFIGRSNVGKSSLINALTGNSKLAKTSQTPGKTQLVNHFLIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYAR P K +I Y++ L +++L+D RH ++++D S Sbjct: 70 NWYLVDLPGYGYARLPDKERAKLRHIIWDYVNRSEELVMLFVLLDSRHDMQEVDLRFISE 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L +K + + ++ TK DK T +EK K + P V +SSV G E Sbjct: 130 LGEKGIPFGLIFTKADKQGATVTAAQVEKNKARLLEEWEELPPVFISSSVSGLGRE---- 185 Query: 205 AILETINY 212 E +NY Sbjct: 186 ---EILNY 190 >gi|27468266|ref|NP_764903.1| GTPase EngB [Staphylococcus epidermidis ATCC 12228] gi|57867148|ref|YP_188811.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis RP62A] gi|251811068|ref|ZP_04825541.1| GTPase [Staphylococcus epidermidis BCM-HMP0060] gi|282875906|ref|ZP_06284773.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis SK135] gi|293366378|ref|ZP_06613057.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis M23864:W2(grey)] gi|38257583|sp|Q8CS80|ENGB_STAES RecName: Full=Probable GTP-binding protein EngB gi|71151869|sp|Q5HNN0|ENGB_STAEQ RecName: Full=Probable GTP-binding protein EngB gi|27315812|gb|AAO04947.1|AE016748_181 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57637806|gb|AAW54594.1| GTP-binding protein, EngB family [Staphylococcus epidermidis RP62A] gi|251805403|gb|EES58060.1| GTPase [Staphylococcus epidermidis BCM-HMP0060] gi|281294931|gb|EFA87458.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis SK135] gi|291319503|gb|EFE59870.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis M23864:W2(grey)] gi|329733782|gb|EGG70108.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis VCU045] gi|329737463|gb|EGG73717.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis VCU028] Length = 195 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 89/151 (58%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 21 PDTGLTEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH + D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTEDDVLMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK++ Q+ +++ K Sbjct: 132 LKHFDIPTLVICTKEDKIAKGKVQKHIKRIK 162 >gi|189462131|ref|ZP_03010916.1| hypothetical protein BACCOP_02811 [Bacteroides coprocola DSM 17136] gi|189431212|gb|EDV00197.1| hypothetical protein BACCOP_02811 [Bacteroides coprocola DSM 17136] Length = 239 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 15/189 (7%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKN 81 + P+ PE AF GRSNVGKSSLIN+L + LA TS PG+T +N F V K++ Sbjct: 56 MCPQTNLPEYAFIGRSNVGKSSLINMLTKQPKLAMTSATPGKTLLINHFLVNKEW----- 110 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ KK +D LI Y+ ER + C+++L+D R ++ID + Sbjct: 111 -----YLVDLPGYGYAQRGKKMMDKIQKLIEYYVLEREQMTCLFVLVDSRLESQKIDLEF 165 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 +L + V + I+ TK DK S + + + +++ P +SS K+ G Sbjct: 166 MEWLGENGVPFAIIFTKSDKQSSGKTKFNVNRYMEVLKEQWEELPPYFISSSEKKTG--- 222 Query: 202 LRKAILETI 210 RK IL+ I Sbjct: 223 -RKEILDYI 230 >gi|188590593|ref|YP_001921995.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum E3 str. Alaska E43] gi|238691973|sp|B2UX10|ENGB_CLOBA RecName: Full=Probable GTP-binding protein EngB gi|188500874|gb|ACD54010.1| GTP-binding protein [Clostridium botulinum E3 str. Alaska E43] Length = 198 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/176 (42%), Positives = 97/176 (55%), Gaps = 19/176 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF GRSNVGKSSLIN L NRK LA+ S PG+T+ +NFF L NN LVD Sbjct: 25 EVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRLINFF-------LINN--DFYLVD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ K D+WG I YLS R L+ + L+D RH K D+ + K Sbjct: 76 LPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRH--KPTGDDIMMYEWAKHF 133 Query: 151 SYQIVL--TKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVL 202 Y +V+ TK DKL +K++ LIR+ T + SS+ +KG E L Sbjct: 134 GYDVVIVATKSDKLK----NAEFKKSEKLIRDTLKLTKDDKFYFYSSLNKKGTEEL 185 >gi|307297311|ref|ZP_07577117.1| ribosome biogenesis GTP-binding protein YsxC [Thermotogales bacterium mesG1.Ag.4.2] gi|306916571|gb|EFN46953.1| ribosome biogenesis GTP-binding protein YsxC [Thermotogales bacterium mesG1.Ag.4.2] Length = 190 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/183 (39%), Positives = 104/183 (56%), Gaps = 16/183 (8%) Query: 29 PP---EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLP 84 PP EIAF+GRSNVGKSSL+N L RK LA+TS+ PG+T+ +NF+ V ++ Sbjct: 20 PPLRREIAFAGRSNVGKSSLLNSLFGRK-LAKTSSTPGKTRSINFYGVNRE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+A + W LI+ Y R L V +L+D RH ++ D + + Sbjct: 70 -IYFVDLPGYGYAKASMSEREKWKKLIIDYFESREELSLVVVLVDIRHPLQPADIQMLEW 128 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + + +VLTK DKLS Q EK+ +P V S+VK++GIE L Sbjct: 129 VTYYTIPFILVLTKADKLS-RNQQIIAEKSIKDELASLGVYPPVFVVSAVKKQGIEELLI 187 Query: 205 AIL 207 A+L Sbjct: 188 ALL 190 >gi|71906265|ref|YP_283852.1| cell division checkpoint GTPase YihA [Dechloromonas aromatica RCB] gi|119369189|sp|Q47IE9|ENGB_DECAR RecName: Full=Probable GTP-binding protein EngB gi|71845886|gb|AAZ45382.1| cell division checkpoint GTPase YihA [Dechloromonas aromatica RCB] Length = 220 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 105/207 (50%), Gaps = 12/207 (5%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F K+ +FL V + LP+ E+AF+GRSN GKSS IN L R LA S PGRT Sbjct: 3 LFQKA--VFLTTVANLRDLPQDSVREVAFAGRSNAGKSSAINTLAGRVRLAFVSKTPGRT 60 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 QHLN+F + VD+PGYGYA+AP+ W GLI YLS+R L + Sbjct: 61 QHLNYFTLDE---------GKYFVDLPGYGYAKAPEAIRSQWEGLIGPYLSKRDQLAGLV 111 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +++D R + +D + + I+L+K DKLS + L K + + A Sbjct: 112 VIMDIRRPMTDLDLRLIDWFRPTGRPIHILLSKSDKLSRQDQTKALRSVKAEVATWGDAD 171 Query: 186 PEVIPT-SSVKRKGIEVLRKAILETIN 211 + SS+K+ G+E + + ++ Sbjct: 172 LYSVQLFSSLKKAGVEEAERVLASWLD 198 >gi|300113290|ref|YP_003759865.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosococcus watsonii C-113] gi|299539227|gb|ADJ27544.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosococcus watsonii C-113] Length = 200 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 100/185 (54%), Gaps = 14/185 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+GRSNVGKSS IN + LARTS PGRTQ +NFF L Sbjct: 20 LPPDKGMEVAFAGRSNVGKSSAINTITGIGGLARTSKTPGRTQMINFF----------QL 69 Query: 84 PAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 A LVD+PGYGYA+ P+ W + YL +R L + L++D R + D + Sbjct: 70 DARRYLVDLPGYGYAKVPEAVKQQWQQTLSAYLEQRRALCGIVLVVDIRRLYQPFDLQML 129 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ + + +I+LTK DKL A + L+K T +L PTA ++ S+V R G+E Sbjct: 130 AWCRSRELPVRILLTKSDKLKRGAANQALQKATAHLQEVLPTARVQLF--SAVNRMGVEA 187 Query: 202 LRKAI 206 ++ + Sbjct: 188 IQAQL 192 >gi|291533788|emb|CBL06901.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Megamonas hypermegale ART12/1] Length = 222 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 3/186 (1%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ EIAF GRSNVGKSSLIN L NLAR S PG+TQ +NF+ N Sbjct: 38 PEERLKEIAFIGRSNVGKSSLINSLTRVHNLARVSGQPGKTQTINFYELTARFNETGEDK 97 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ + N W I Y L+ V LID RH + D+++F + Sbjct: 98 LFHLVDLPGYGYAKTAQTNRKQWAKFIEEYFLHSEHLQFVCQLIDIRHEPMKSDKEMFDW 157 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K + I+ TK DK+S + + + + ++ +++P SS K++G L Sbjct: 158 LIKNNIPVLIIATKADKISRGAVHKQIAQIR---KSLGVKEIDILPYSSPKKQGRAELLN 214 Query: 205 AILETI 210 I E + Sbjct: 215 VIYEML 220 >gi|47566659|ref|ZP_00237481.1| GTP-binding protein [Bacillus cereus G9241] gi|47556689|gb|EAL15021.1| GTP-binding protein [Bacillus cereus G9241] Length = 198 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 95/182 (52%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ + Sbjct: 19 PEGDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLINEM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ F Sbjct: 71 -MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + I+ TK DK+ Q+ L+ K + + EV+ SS G E K Sbjct: 130 LKHYDIPTIIIATKADKIPKGKWQKHLKVVKETLD--IESGDEVVLFSSETGLGKEEAWK 187 Query: 205 AI 206 AI Sbjct: 188 AI 189 >gi|81428670|ref|YP_395670.1| GTPase EngB [Lactobacillus sakei subsp. sakei 23K] gi|119369209|sp|Q38WS0|ENGB_LACSS RecName: Full=Probable GTP-binding protein EngB gi|78610312|emb|CAI55361.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K] Length = 199 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/139 (46%), Positives = 85/139 (61%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA SGRSNVGKSSLIN L+NRK+ ARTS+ PG+TQ LNF+ ++N L Sbjct: 19 PTDQLPEIALSGRSNVGKSSLINKLINRKSYARTSSKPGKTQTLNFY------RVENEL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ KK + +G +I YL+ R LR + LID RH D ++ F Sbjct: 72 --YFVDVPGYGYAKVSKKQREKFGQIIEAYLTNRDNLRGLISLIDGRHEPTDDDIAMYVF 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 + +V TK+DK+S Sbjct: 130 AKYYDIPVLVVATKMDKIS 148 >gi|18400109|ref|NP_565543.1| EMB2001 (embryo defective 2001); GTP binding [Arabidopsis thaliana] gi|21903474|sp|O81004|Y2287_ARATH RecName: Full=GTP-binding protein At2g22870; AltName: Full=Protein EMBRYO DEFECTIVE 2001 gi|20197273|gb|AAC32434.2| putative nucleotide-binding protein [Arabidopsis thaliana] gi|21592880|gb|AAM64830.1| putative nucleotide-binding protein [Arabidopsis thaliana] gi|52354269|gb|AAU44455.1| hypothetical protein AT2G22870 [Arabidopsis thaliana] gi|55740571|gb|AAV63878.1| hypothetical protein At2g22870 [Arabidopsis thaliana] gi|330252273|gb|AEC07367.1| GTP-binding protein [Arabidopsis thaliana] Length = 300 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/191 (37%), Positives = 97/191 (50%), Gaps = 12/191 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 116 PKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNK--------- 166 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +VD+PGYG+A+ W Y R +L CV LLID ++ID D ++ Sbjct: 167 SWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDSLVCVLLLIDASVPPQKIDLDCANW 226 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ---ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L + V V TK DK+ T + E ++ + +IR HP I TSSV G + Sbjct: 227 LGRNNVPMTFVFTKCDKMKATKGKRPDENIKAFQQIIRENFKVHPPWILTSSVSGLGRDE 286 Query: 202 LRKAILETINY 212 L + + NY Sbjct: 287 LLLHMSQLRNY 297 >gi|332637217|ref|ZP_08416080.1| GTP-binding protein YsxC [Weissella cibaria KACC 11862] Length = 209 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/141 (43%), Positives = 87/141 (61%), Gaps = 11/141 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE+AF GRSNVGKSSL N+L+NRK+ ARTS+ PG+TQ LNF+ +D Sbjct: 19 PTDGLPEVAFVGRSNVGKSSLTNVLINRKSFARTSSQPGKTQTLNFYKVED--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ KK + + +I YL R L+ + L+D RH + D +++++ Sbjct: 70 QIFFVDVPGYGYAKVSKKAREEFAVMIGEYLRTREPLKGIVQLVDARHMPSKEDIEMYNW 129 Query: 145 L--DKKAVSYQIVLTKIDKLS 163 L D + +V TK DK+S Sbjct: 130 LTSDDIGLPVLVVATKADKIS 150 >gi|311087831|gb|ADP67910.1| ribosome biogenesis GTP-binding protein YsxC [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 205 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 18/194 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ +I + EIAF G SN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 11 FLKSYSKITDIDIQNGIEIAFIGYSNTGKSSAINALTNQKKLARFSKTPGRTQLINFF-- 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGY++AP W + YL +R ++ LL+D R+ Sbjct: 69 -------EVVSGFRIVDLPGYGYSQAPLLVRSKWQKKVYDYLEKREQIKLFVLLMDIRYP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL----SPTTAQETLEKTKYLIRNYPTAHPEVI 189 +K++DQ + S +K +S ++LTK DK+ A +K L+ ++ ++I Sbjct: 122 LKKLDQKIISIAVQKKISILVLLTKCDKIKINHQKNQADMVFKKLNVLLDSF-----KII 176 Query: 190 PTSSVKRKGIEVLR 203 SS K+ GIE L+ Sbjct: 177 LFSSYKKIGIEKLK 190 >gi|126653685|ref|ZP_01725604.1| GTP-binding protein [Bacillus sp. B14905] gi|126589722|gb|EAZ83857.1| GTP-binding protein [Bacillus sp. B14905] Length = 193 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/158 (39%), Positives = 88/158 (55%), Gaps = 16/158 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE A +GRSNVGKSS IN ++ RK LAR S+ PG+TQ LNF+ ++ Sbjct: 19 PEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQTLNFYKIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K ++WG +I RY + R L+ V +ID RH D+ ++ F Sbjct: 70 QLFFVDVPGYGYAKVSKSEREAWGKMIERYFTGRQELKAVVQIIDLRHPPTADDRMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKL-------SPTTAQETLEKTK 175 L + ++ TK DK+ +ETLE K Sbjct: 130 LKHYNIPCIVIATKADKIPKGKWDKHKKIVKETLEMEK 167 >gi|118586682|ref|ZP_01544120.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118432867|gb|EAV39595.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 198 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/174 (39%), Positives = 96/174 (55%), Gaps = 10/174 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P EIAF GRSNVGKSSLIN L+ R LA TS PG+TQ LNF+ NL L Sbjct: 19 PAGNLSEIAFVGRSNVGKSSLINTLIERNGLAHTSGQPGKTQTLNFY------NLDEKL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K + +G ++ YLS R L+ V LID RH + D+ ++++ Sbjct: 72 --FFVDVPGYGYAKVSKAQREQFGSMVEEYLSSRDQLKGVISLIDARHEPTEDDKLMYNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 L+ V IV TK DK++ + K ++ + + +I S++K+ G Sbjct: 130 LEYYQVPILIVATKADKVASGKFNAVESQIKKTLK-FNSTTSSLILFSAIKKFG 182 >gi|224419264|ref|ZP_03657270.1| GTPase EngB [Helicobacter canadensis MIT 98-5491] gi|253826978|ref|ZP_04869863.1| GTP-binding protein [Helicobacter canadensis MIT 98-5491] gi|313142766|ref|ZP_07804959.1| GTP-binding protein [Helicobacter canadensis MIT 98-5491] gi|253510384|gb|EES89043.1| GTP-binding protein [Helicobacter canadensis MIT 98-5491] gi|313131797|gb|EFR49414.1| GTP-binding protein [Helicobacter canadensis MIT 98-5491] Length = 209 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 23/193 (11%) Query: 24 LPKAGPP---EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 L + PP EIAF GRSNVGKS+ IN+L +KNLA++S PG+TQ +NFF+ Sbjct: 17 LSQCPPPLLSEIAFLGRSNVGKSTFINLLCKQKNLAKSSQTPGKTQLINFFLTHWKQKDS 76 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 N + + LVD+PG+GYA+ K + W ++ +L +R ++R L D RH +ID + Sbjct: 77 NEILQIYLVDLPGFGYAKVSKSQKELWNKNLIEFLKKRDSIRLFVHLRDSRHPYLEIDSN 136 Query: 141 VFSFL------DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + FL D+K + + TK DKL+ T +KT N P + +SS+ Sbjct: 137 LIEFLTPFLRKDQKILQ---IFTKFDKLNST------QKT-----NLKKEFPNALFSSSL 182 Query: 195 KRKGIEVLRKAIL 207 ++ ++ + IL Sbjct: 183 QKNNLQEISDFIL 195 >gi|187935182|ref|YP_001887073.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum B str. Eklund 17B] gi|238691648|sp|B2TPB6|ENGB_CLOBB RecName: Full=Probable GTP-binding protein EngB gi|187723335|gb|ACD24556.1| GTP-binding protein [Clostridium botulinum B str. Eklund 17B] Length = 198 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/176 (42%), Positives = 97/176 (55%), Gaps = 19/176 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF GRSNVGKSSLIN L NRK LA+ S PG+T+ +NFF L NN LVD Sbjct: 25 EVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRLINFF-------LINN--DFYLVD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ K D+WG I YLS R L+ + L+D RH K D+ + K Sbjct: 76 LPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRH--KPTGDDIMMYEWAKHF 133 Query: 151 SYQIVL--TKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVL 202 Y +V+ TK DKL +K++ LIR T ++ SS+ +KG E L Sbjct: 134 GYDVVVVATKSDKLK----NAEFKKSEKLIRETLNLTKDDKLYFYSSLNKKGTEEL 185 >gi|197286653|ref|YP_002152525.1| GTP-binding protein [Proteus mirabilis HI4320] gi|194684140|emb|CAR45568.1| probable GTP-binding protein [Proteus mirabilis HI4320] Length = 207 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 104/195 (53%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L + LARTS PGRTQ +N F Sbjct: 11 FIISAPDIRHLPPDTGIEIAFAGRSNAGKSSALNALTQQNGLARTSKTPGRTQLINLFQI 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD+PGYGYA+ P++ W + YL +R L+ V +L+D RH Sbjct: 71 EE---------GRRLVDLPGYGYAQVPEEMKRKWQRSLGEYLQKRECLKGVVILMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + + ++LTK DKL+ ++ L + + + + V SS Sbjct: 122 LKDLDMQMIDWAVDSELPTLVLLTKADKLASGARKKQLMAVQNAL-SEKSGDIRVECFSS 180 Query: 194 VKRKGIEVLRKAILE 208 +K+ GI+ LR + E Sbjct: 181 LKKIGIDKLRNTLNE 195 >gi|297811265|ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] gi|297319353|gb|EFH49775.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] Length = 318 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/193 (39%), Positives = 100/193 (51%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 131 PADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRIND--------- 181 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA AP + W Y RSTL V+LL+D VKQID + S+ Sbjct: 182 KWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKQIDLEYASW 241 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + V ++ TK DK +E +++ + LI+ + P I TSSV +G Sbjct: 242 LGQNQVPMTLIFTKCDKRKKKKNGGKKPEENIKEFQDLIQGFFETTPPWIMTSSVTNQGR 301 Query: 200 EVLRKAILETINY 212 + + + + NY Sbjct: 302 DEILLHMAQLRNY 314 >gi|149917815|ref|ZP_01906310.1| GTP-binding protein [Plesiocystis pacifica SIR-1] gi|149821335|gb|EDM80737.1| GTP-binding protein [Plesiocystis pacifica SIR-1] Length = 264 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/150 (40%), Positives = 88/150 (58%), Gaps = 1/150 (0%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P++ P A PEIA +GRSNVGKSSL+N ++ LAR S PGRT+ LNFF Sbjct: 28 FELSAPKLADCPPADLPEIAVAGRSNVGKSSLLNAFTEQRGLARVSRTPGRTRLLNFFH- 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + ++ VD+PGYG+A+A ++ DS+G +I YL +R L + +LID RHG Sbjct: 87 MQLAGPREAQVSLRWVDLPGYGFAKARREVRDSFGPMIESYLRQRDALGGLLVLIDARHG 146 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 K D ++ F + ++ + TK DKL Sbjct: 147 PKDSDFELLEFCREISLPSLLCATKCDKLG 176 >gi|290981580|ref|XP_002673508.1| predicted protein [Naegleria gruberi] gi|284087092|gb|EFC40764.1| predicted protein [Naegleria gruberi] Length = 441 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/183 (39%), Positives = 99/183 (54%), Gaps = 14/183 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNL---ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P+I F+GRSNVGKSSLIN LV + A S+ PG TQ LN + D A+ Sbjct: 183 PKIVFAGRSNVGKSSLINALVTKTGKGGKAAVSSKPGETQSLNCYQLSD---------AI 233 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VD+PGYG+A A ++ W I +L S LR V++LID RHG K+ D +FL+ Sbjct: 234 NIVDLPGYGFAFAEEEKRLEWQEQIRNFLLTASKLRRVFILIDARHGFKETDYSFLTFLN 293 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVLRK 204 + + QI+LTK D L + E IR P H E+I SS K GI+ +++ Sbjct: 294 QNKIKNQIILTKCDLLYDDEIAKQYEYLINQIRVRPFNHTCEEMIVVSSKKMNGIKEIQE 353 Query: 205 AIL 207 IL Sbjct: 354 EIL 356 >gi|190575834|ref|YP_001973679.1| ribosome biogenesis GTP-binding protein YsxC [Stenotrophomonas maltophilia K279a] gi|229463763|sp|B2FTY5|ENGB_STRMK RecName: Full=Probable GTP-binding protein EngB gi|190013756|emb|CAQ47391.1| putative ATP/GTP binding protein [Stenotrophomonas maltophilia K279a] Length = 200 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 94/183 (51%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF Sbjct: 20 LPPDEGAEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFF---------QVT 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P W I +Y R L+ + +++D RH +K D+ + S Sbjct: 71 PEAHLVDLPGYGYAKVPLDLQAHWQAFIDKYFRTREALKGLVVVMDIRHPLKDYDRQMLS 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKLS + ++L+K + +++ V S R G++ R Sbjct: 131 YAVQRGLPAHALLTKADKLSRSQQMQSLQKVRKELQSAYGDSVSVQVFSGEDRTGVDEAR 190 Query: 204 KAI 206 I Sbjct: 191 GVI 193 >gi|329724700|gb|EGG61206.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis VCU144] Length = 195 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 89/151 (58%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 21 PDTGLTEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH + D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTEDDVLMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK++ Q+ +++ K Sbjct: 132 LKHFDIPTLVICTKEDKIAKGKLQKHIKRIK 162 >gi|167587741|ref|ZP_02380129.1| GTP-binding protein HSR1-related [Burkholderia ubonensis Bu] Length = 219 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 96/181 (53%), Gaps = 9/181 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 20 LPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + ++D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSTYLATRSQLCGLILMMDSRRPLTELDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT----SSVKRKGI 199 + +LTK DKL+ + L T+ + Y A E T S++KR G+ Sbjct: 135 WFAPTGKPIHTLLTKCDKLTRQESINALRTTQKGLDAYRDAGVEGKLTAQLFSALKRTGL 194 Query: 200 E 200 + Sbjct: 195 D 195 >gi|71892385|ref|YP_278119.1| GTP-binding protein [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|119368792|sp|Q491W2|ENGB_BLOPB RecName: Full=Probable GTP-binding protein EngB gi|71796491|gb|AAZ41242.1| Probable GTP-binding protein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 199 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/195 (36%), Positives = 101/195 (51%), Gaps = 12/195 (6%) Query: 14 FLRGVPEIGLLP--KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 FL VP + LP K G E+AF G SN GKSS IN L +K L + S PG TQ +N F Sbjct: 10 FLISVPAVYCLPNEKIGM-EVAFVGYSNSGKSSAINALTYQKKLTKVSKTPGCTQLINLF 68 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 P + L+D PGYGYA+ KK + W +I YL +R L+ + L++D R Sbjct: 69 EVS---------PGIRLIDFPGYGYAKKTKKRKNYWHDVICEYLKKRKNLKGLILMMDIR 119 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 H +K +DQ V +L+K DK+S Q T +K + ++ H +V P Sbjct: 120 HPIKDLDQKTIESALSVDVPVFTLLSKSDKISRNILQVTSKKIIHDMKMMFETHIQVEPF 179 Query: 192 SSVKRKGIEVLRKAI 206 S VK+ GI L++ + Sbjct: 180 SVVKKYGIHSLKRVL 194 >gi|119358159|ref|YP_912803.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium phaeobacteroides DSM 266] gi|166225950|sp|A1BJ02|ENGB_CHLPD RecName: Full=Probable GTP-binding protein EngB gi|119355508|gb|ABL66379.1| GTP-binding protein, HSR1-related protein [Chlorobium phaeobacteroides DSM 266] Length = 192 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 9/142 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEI F+GRSNVGKS+L+N L K LA+TS+ PG+T+ +NFF+ Sbjct: 18 LPDLQIPEIVFAGRSNVGKSTLLNSLAGIKGLAKTSSTPGKTRLINFFLVN--------- 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A VD+PGYG+A + ++W L+ Y+ RS + V LL+D RH Q D+++ Sbjct: 69 KAFFFVDLPGYGFAAVGHEQHEAWKKLLTTYIERRSAITLVVLLVDSRHPAMQSDREMID 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPT 165 +L Y IVLTK DKL+ + Sbjct: 129 YLTYLGKPYGIVLTKDDKLTQS 150 >gi|126643102|ref|YP_001086086.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii ATCC 17978] gi|166225936|sp|A3M990|ENGB_ACIBT RecName: Full=Probable GTP-binding protein EngB Length = 211 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 9/195 (4%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 3 APKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFF------ 56 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 +L N P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH ++ Sbjct: 57 SLGN--PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHPLQHF 114 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + + + + I+LTK DKL+ A + L + K ++ + SS+ + Sbjct: 115 DMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSSLNKL 173 Query: 198 GIEVLRKAILETINY 212 G+E L + +++ Sbjct: 174 GLEELASVMAGRLHF 188 >gi|116490352|ref|YP_809896.1| GTPase [Oenococcus oeni PSU-1] gi|290889749|ref|ZP_06552837.1| hypothetical protein AWRIB429_0227 [Oenococcus oeni AWRIB429] gi|122277459|sp|Q04H41|ENGB_OENOB RecName: Full=Probable GTP-binding protein EngB gi|116091077|gb|ABJ56231.1| Predicted GTPase [Oenococcus oeni PSU-1] gi|290480573|gb|EFD89209.1| hypothetical protein AWRIB429_0227 [Oenococcus oeni AWRIB429] Length = 198 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/174 (39%), Positives = 96/174 (55%), Gaps = 10/174 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P EIAF GRSNVGKSSLIN L+ R LA TS PG+TQ LNF+ NL L Sbjct: 19 PAGNLSEIAFVGRSNVGKSSLINTLIERNGLAHTSGQPGKTQTLNFY------NLDEKL- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K + +G ++ YLS R L+ V LID RH + D+ ++++ Sbjct: 72 --FFVDVPGYGYAKVSKAQREQFGSMVEEYLSSRDQLKGVISLIDARHEPTEDDKLMYNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 L+ V IV TK DK++ + K ++ + + +I S++K+ G Sbjct: 130 LEYYQVPILIVATKADKVASGKFNAVESQIKKTLK-FNSTTSSLILFSAIKKFG 182 >gi|295099543|emb|CBK88632.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Eubacterium cylindroides T2-87] Length = 189 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/141 (41%), Positives = 82/141 (58%), Gaps = 9/141 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+ GRSNVGKSS IN L NRK LA + PG+T+ LNFF D Sbjct: 16 PETTLPEVVVVGRSNVGKSSFINALTNRKKLAYVGSTPGKTRLLNFF---DIDQ------ 66 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K +++ G ++ Y +ER ++CV LID RH + D+++ F Sbjct: 67 TWILVDVPGYGYAKMSKSSLEKLGHMMDEYFNEREQIKCVVQLIDARHDPTKDDKEMIDF 126 Query: 145 LDKKAVSYQIVLTKIDKLSPT 165 + ++ IV TKIDK+ T Sbjct: 127 FKEVSIPIVIVATKIDKVPKT 147 >gi|332653037|ref|ZP_08418782.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcaceae bacterium D16] gi|332518183|gb|EGJ47786.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcaceae bacterium D16] Length = 211 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 11/185 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G P++AFSGRSNVGKSS+IN L+NRKN AR APG+T +N+F + N A Sbjct: 22 RDGLPQVAFSGRSNVGKSSVINRLLNRKNFARVGAAPGKTTQINYF------KIDN---A 72 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD+PGYGYA+ K D WG L+ Y ++ + +++D RH D + + Sbjct: 73 FYLVDLPGYGYAKVSKAERDRWGKLMESYFADPELMTLGVMIVDSRHKPTADDCTMAQWY 132 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + +V K+DKL + + L+ + + VIP S+ K G + L A Sbjct: 133 REAGCPFVVVANKLDKLKKSQVEPNLQVIRETLE--LGEGDAVIPFSAEKGTGRQELVSA 190 Query: 206 ILETI 210 IL ++ Sbjct: 191 ILASV 195 >gi|299535611|ref|ZP_07048932.1| GTP-binding protein [Lysinibacillus fusiformis ZC1] gi|298728811|gb|EFI69365.1| GTP-binding protein [Lysinibacillus fusiformis ZC1] Length = 193 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE A +GRSNVGKSS IN ++ RK LAR S+ PG+TQ LNF+ ++ Sbjct: 19 PEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQTLNFYKIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K ++WG +I RY + R L+ V +ID RH D+ ++ F Sbjct: 70 QLFFVDVPGYGYAKVSKTEREAWGKMIERYFTGRQELKAVVQIIDLRHPPTADDRMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + ++ TK DK+ Sbjct: 130 LKHYNIPCIVIATKADKI 147 >gi|222874131|gb|EEF11262.1| predicted protein [Populus trichocarpa] Length = 228 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 15/191 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LPK PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 9 FLTTAAQLHHLPKVDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINL--- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K + L D+PGYGYA + + W +++ YL R +L + LL D R G Sbjct: 66 --FSLGKQGVTDAVLADLPGYGYAAVSRTDKQRWQRVMLNYLVSRESLTGIVLLCDPRLG 123 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVI 189 + ++D+ + L ++ + + ++LTK DKL+ E+ K L I EV Sbjct: 124 LTELDEALLDALRPRVQEGLKFLVLLTKADKLTRA------EQAKVLSITRLNAGGGEVR 177 Query: 190 PTSSVKRKGIE 200 S++K++G++ Sbjct: 178 MFSALKKQGVD 188 >gi|319944767|ref|ZP_08019031.1| ribosome biogenesis GTP-binding protein YsxC [Lautropia mirabilis ATCC 51599] gi|319742016|gb|EFV94439.1| ribosome biogenesis GTP-binding protein YsxC [Lautropia mirabilis ATCC 51599] Length = 238 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 99/183 (54%), Gaps = 11/183 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G PE+AF GRSN GKSS IN L N+K LA +S PGRTQ LN F +K P Sbjct: 26 GLPEVAFVGRSNAGKSSCINTLCNQKRLAFSSRTPGRTQALNLFA---VGPVKQPEPLGF 82 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD PGYG+A A + SW L Y++ R L + L++D R G+ +D+ + +++ Sbjct: 83 LVDTPGYGFATASPEAKRSWQALAGDYMTRRQALTGIVLMVDIRRGLTDLDRQLLAWI-P 141 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE----VIPTSSVKRKGIEVLR 203 + +VLTK DKLS Q+ LE + L++ E + S++ R G+E LR Sbjct: 142 GVLPLVLVLTKADKLS---RQQGLEVRRQLLQEAIIQQREGPVLLQLFSALNRTGVEPLR 198 Query: 204 KAI 206 I Sbjct: 199 DVI 201 >gi|293336000|ref|NP_001168813.1| hypothetical protein LOC100382617 [Zea mays] gi|223973173|gb|ACN30774.1| unknown [Zea mays] Length = 548 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/175 (41%), Positives = 100/175 (57%), Gaps = 11/175 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF+G SNVGKSSL+N L + + RTS+ PG TQ +NFF L + L LV Sbjct: 372 PEIAFAGVSNVGKSSLLNSLTRQWGVVRTSDKPGLTQTINFF------QLASKL---CLV 422 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A + +SW L+ Y+S R L V LL+ + G+K +D ++ +++ Sbjct: 423 DLPGYGFAYAKDEVKESWEELVKEYVSTRVGLERVCLLVHTKRGMKPLDYELVDLMERHK 482 Query: 150 VSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 YQIVLTK D + P A+ +E + L RN +P V+ SS GI LR Sbjct: 483 TPYQIVLTKTDLVFPIDVARRAVEIQESLKRNKSVVNP-VMMVSSKTGAGIRNLR 536 >gi|227486250|ref|ZP_03916566.1| GTPase [Anaerococcus lactolyticus ATCC 51172] gi|227235661|gb|EEI85676.1| GTPase [Anaerococcus lactolyticus ATCC 51172] Length = 195 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 84/151 (55%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIAF GRSNVGKSS IN NRK +A+ S+ PG+T+ +NF+ D Sbjct: 19 PKDALPEIAFVGRSNVGKSSFINSFSNRKAIAKISSKPGKTRTINFYRAND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYG+A+ K W LI YL +R L+ V+L++D RH D+ ++ + Sbjct: 70 TFRLVDLPGYGFAKVSKAEKAKWDKLINEYLHDRENLKEVFLIVDIRHEPTAQDKQMYEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + ++ TK DK+S Q+ + + K Sbjct: 130 IIDSGYMGFVIATKFDKISKGQIQKHINQIK 160 >gi|119470392|ref|ZP_01613120.1| GTP-binding protein [Alteromonadales bacterium TW-7] gi|119446317|gb|EAW27593.1| GTP-binding protein [Alteromonadales bacterium TW-7] Length = 225 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 8/149 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDITKLPADTGIEVAFAGRSNAGKSSALNALTDQK-LARTSKTPGRTQLINTFEL 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D N M L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADVDN-------MRLIDLPGYGFAKVPIEMKKKWQKSLGEYLQKRQSLKGIVVLMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 +K +D+D+ ++ + +LTK DKL Sbjct: 125 LKDLDRDLINWAIGSEIPVLALLTKADKL 153 >gi|167640704|ref|ZP_02398964.1| GTP-binding protein [Bacillus anthracis str. A0193] gi|177654009|ref|ZP_02936050.1| GTP-binding protein [Bacillus anthracis str. A0174] gi|254736573|ref|ZP_05194279.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Western North America USA6153] gi|167511276|gb|EDR86662.1| GTP-binding protein [Bacillus anthracis str. A0193] gi|172081064|gb|EDT66142.1| GTP-binding protein [Bacillus anthracis str. A0174] Length = 198 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ + Sbjct: 19 PDGDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLINEM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ F Sbjct: 71 -MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + I+ TK DK+ Q+ L+ K + + EV+ SS G E K Sbjct: 130 LKHYDIPTIIIATKADKIPKGKWQKHLKVVKETLD--IESGDEVVLFSSETGLGKEEAWK 187 Query: 205 AI 206 AI Sbjct: 188 AI 189 >gi|30264537|ref|NP_846914.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Ames] gi|42783606|ref|NP_980853.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus ATCC 10987] gi|47530000|ref|YP_021349.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. 'Ames Ancestor'] gi|49187361|ref|YP_030613.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Sterne] gi|49480673|ref|YP_038519.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141039|ref|YP_085792.1| GTPase EngB [Bacillus cereus E33L] gi|65321838|ref|ZP_00394797.1| COG0218: Predicted GTPase [Bacillus anthracis str. A2012] gi|118479635|ref|YP_896786.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus thuringiensis str. Al Hakam] gi|165872017|ref|ZP_02216658.1| GTP-binding protein [Bacillus anthracis str. A0488] gi|167636218|ref|ZP_02394522.1| GTP-binding protein [Bacillus anthracis str. A0442] gi|170688697|ref|ZP_02879902.1| GTP-binding protein [Bacillus anthracis str. A0465] gi|170708355|ref|ZP_02898799.1| GTP-binding protein [Bacillus anthracis str. A0389] gi|190567036|ref|ZP_03019952.1| GTP-binding protein [Bacillus anthracis Tsiankovskii-I] gi|196034435|ref|ZP_03101844.1| GTP-binding protein [Bacillus cereus W] gi|196039265|ref|ZP_03106571.1| GTP-binding protein [Bacillus cereus NVH0597-99] gi|196044931|ref|ZP_03112165.1| GTP-binding protein [Bacillus cereus 03BB108] gi|206976023|ref|ZP_03236933.1| GTP-binding protein [Bacillus cereus H3081.97] gi|217961961|ref|YP_002340531.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus AH187] gi|218905671|ref|YP_002453505.1| GTP-binding protein [Bacillus cereus AH820] gi|222097915|ref|YP_002531972.1| ribosome biogenesis gtp-binding protein ysxc [Bacillus cereus Q1] gi|225866450|ref|YP_002751828.1| GTP-binding protein [Bacillus cereus 03BB102] gi|227817249|ref|YP_002817258.1| GTP-binding protein [Bacillus anthracis str. CDC 684] gi|229601182|ref|YP_002868753.1| GTP-binding protein [Bacillus anthracis str. A0248] gi|254687041|ref|ZP_05150899.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. CNEVA-9066] gi|254724603|ref|ZP_05186386.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. A1055] gi|254741611|ref|ZP_05199298.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Kruger B] gi|254754791|ref|ZP_05206826.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Vollum] gi|254757623|ref|ZP_05209650.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Australia 94] gi|301055976|ref|YP_003794187.1| GTP-binding protein [Bacillus anthracis CI] gi|81824176|sp|Q633X5|ENGB_BACCZ RecName: Full=Probable GTP-binding protein EngB gi|81828193|sp|Q6HD57|ENGB_BACHK RecName: Full=Probable GTP-binding protein EngB gi|81830956|sp|Q72ZV7|ENGB_BACC1 RecName: Full=Probable GTP-binding protein EngB gi|81837587|sp|Q81LC2|ENGB_BACAN RecName: Full=Probable GTP-binding protein EngB gi|166225942|sp|A0RJ86|ENGB_BACAH RecName: Full=Probable GTP-binding protein EngB gi|226741190|sp|B7HQM9|ENGB_BACC7 RecName: Full=Probable GTP-binding protein EngB gi|226741193|sp|B7JQ62|ENGB_BACC0 RecName: Full=Probable GTP-binding protein EngB gi|254783184|sp|C3P9F4|ENGB_BACAA RecName: Full=Probable GTP-binding protein EngB gi|254783185|sp|C3L700|ENGB_BACAC RecName: Full=Probable GTP-binding protein EngB gi|254783186|sp|C1ETR5|ENGB_BACC3 RecName: Full=Probable GTP-binding protein EngB gi|254783187|sp|B9IZ44|ENGB_BACCQ RecName: Full=Probable GTP-binding protein EngB gi|30259195|gb|AAP28400.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Ames] gi|42739535|gb|AAS43461.1| GTP-binding protein [Bacillus cereus ATCC 10987] gi|47505148|gb|AAT33824.1| GTP-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181288|gb|AAT56664.1| GTP-binding protein [Bacillus anthracis str. Sterne] gi|49332229|gb|AAT62875.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974508|gb|AAU16058.1| GTP-binding protein [Bacillus cereus E33L] gi|118418860|gb|ABK87279.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam] gi|164712307|gb|EDR17843.1| GTP-binding protein [Bacillus anthracis str. A0488] gi|167528439|gb|EDR91207.1| GTP-binding protein [Bacillus anthracis str. A0442] gi|170126730|gb|EDS95613.1| GTP-binding protein [Bacillus anthracis str. A0389] gi|170667383|gb|EDT18141.1| GTP-binding protein [Bacillus anthracis str. A0465] gi|190562027|gb|EDV15996.1| GTP-binding protein [Bacillus anthracis Tsiankovskii-I] gi|195992977|gb|EDX56936.1| GTP-binding protein [Bacillus cereus W] gi|196024419|gb|EDX63092.1| GTP-binding protein [Bacillus cereus 03BB108] gi|196029892|gb|EDX68493.1| GTP-binding protein [Bacillus cereus NVH0597-99] gi|206745775|gb|EDZ57172.1| GTP-binding protein [Bacillus cereus H3081.97] gi|217067125|gb|ACJ81375.1| GTP-binding protein [Bacillus cereus AH187] gi|218536600|gb|ACK88998.1| GTP-binding protein [Bacillus cereus AH820] gi|221241973|gb|ACM14683.1| GTP-binding protein [Bacillus cereus Q1] gi|225789215|gb|ACO29432.1| GTP-binding protein [Bacillus cereus 03BB102] gi|227006669|gb|ACP16412.1| GTP-binding protein [Bacillus anthracis str. CDC 684] gi|229265590|gb|ACQ47227.1| GTP-binding protein [Bacillus anthracis str. A0248] gi|300378145|gb|ADK07049.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI] gi|324328373|gb|ADY23633.1| GTP-binding protein YsxC [Bacillus thuringiensis serovar finitimus YBT-020] Length = 198 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 94/182 (51%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ + Sbjct: 19 PDGDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLINEM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ F Sbjct: 71 -MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + I+ TK DK+ Q+ L+ K + + EV+ SS G E K Sbjct: 130 LKHYDIPTIIIATKADKIPKGKWQKHLKVVKETLD--IESGDEVVLFSSETGLGKEEAWK 187 Query: 205 AI 206 AI Sbjct: 188 AI 189 >gi|315053937|ref|XP_003176343.1| GTP-binding protein engB [Arthroderma gypseum CBS 118893] gi|311338189|gb|EFQ97391.1| GTP-binding protein engB [Arthroderma gypseum CBS 118893] Length = 314 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 9/139 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P++ PE+ F GRSNVGKSS+IN+LV +++ TS PGRTQ +N F LK Sbjct: 102 IPESDTPEVVFMGRSNVGKSSVINMLVG-EDICYTSATPGRTQTMNAF---GVGGLKGGE 157 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + ++D PGYG A P+ WG +++YLS+R LR V+L+I+C+ GVK D++V S Sbjct: 158 TKINIIDSPGYGKASRPE-----WGHELMKYLSKRKQLRRVFLIIECKAGVKHSDKEVLS 212 Query: 144 FLDKKAVSYQIVLTKIDKL 162 L + + +QI+++K D Sbjct: 213 ILREFTIPHQIIVSKADHF 231 >gi|194335477|ref|YP_002017271.1| GTP-binding protein HSR1-related [Pelodictyon phaeoclathratiforme BU-1] gi|238693375|sp|B4SC74|ENGB_PELPB RecName: Full=Probable GTP-binding protein EngB gi|194307954|gb|ACF42654.1| GTP-binding protein HSR1-related [Pelodictyon phaeoclathratiforme BU-1] Length = 193 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 11/158 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F V + LP+ PEI F+GRSNVGKS+L+N L K LA+TS PG+T+ +N+F + Sbjct: 8 FHISVSALSGLPEDSFPEIVFAGRSNVGKSTLLNSLTGVKGLAKTSATPGKTRLINYFLI 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +D + VD+PGYGYA WG L+ Y+ +R ++ V LL+D RH Sbjct: 68 NRD----------VYFVDLPGYGYAAVGHAEKALWGNLLSSYIIQRRSISLVVLLLDSRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET 170 Q D+ + SFL+ Y IVLTK DKL+ +T Sbjct: 118 PAMQSDRAMISFLESHDRPYGIVLTKYDKLTQKEKVQT 155 >gi|227872172|ref|ZP_03990540.1| GTPase [Oribacterium sinus F0268] gi|227841985|gb|EEJ52247.1| GTPase [Oribacterium sinus F0268] Length = 161 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/154 (38%), Positives = 89/154 (57%), Gaps = 12/154 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LPK G PE +GRSNVGKSS IN L+ RK+ ARTS+ PG+T+ +NF+ D Sbjct: 18 LPKTGKPEFVLAGRSNVGKSSFINTLLQRKSFARTSSTPGKTRTINFYSVND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGYA + W +I RYL + + V LL+DCR + D +F Sbjct: 70 -SFYLVDLPGYGYAATGPVEQEKWDRMIRRYLEQGEDIEEVVLLLDCRRIPSEKDLQMFQ 128 Query: 144 FLDKKAVSYQ--IVLTKIDKLSPTTAQETLEKTK 175 ++ A Y+ +++TK+DKL + Q+ ++ + Sbjct: 129 WI-CSATGYEPIVIITKMDKLKRSQQQQAVKDIR 161 >gi|289550570|ref|YP_003471474.1| GTP-binding protein EngB [Staphylococcus lugdunensis HKU09-01] gi|289180102|gb|ADC87347.1| GTP-binding protein EngB [Staphylococcus lugdunensis HKU09-01] Length = 202 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P EIA SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 28 PDTNLSEIALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDQ 78 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I Y++ R LR V L+D RH Q D ++++ Sbjct: 79 QLIFVDVPGYGYAKVSKSQREKFGKMIEEYITTRENLRLVIQLVDLRHNPTQDDILMYNY 138 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK+ Q+ L+ K Sbjct: 139 LKHFDIPTLVICTKEDKIPKGKVQKHLKNIK 169 >gi|160901032|ref|YP_001566614.1| ribosome biogenesis GTP-binding protein YsxC [Delftia acidovorans SPH-1] gi|160366616|gb|ABX38229.1| GTP-binding protein HSR1-related [Delftia acidovorans SPH-1] Length = 259 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 15/191 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LPK PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 40 FLTTAAQLHHLPKVDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINL--- 96 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 FS K + L D+PGYGYA + + W +++ YL R +L + LL D R G Sbjct: 97 --FSLGKQGVTDAVLADLPGYGYAAVSRTDKQRWQRVMLNYLVSRESLTGIVLLCDPRLG 154 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVI 189 + ++D+ + L ++ + + ++LTK DKL+ E+ K L I EV Sbjct: 155 LTELDEALLDALRPRVQEGLKFLVLLTKADKLTRA------EQAKVLSITRLNAGGGEVR 208 Query: 190 PTSSVKRKGIE 200 S++K++G++ Sbjct: 209 MFSALKKQGVD 219 >gi|56459139|ref|YP_154420.1| ribosome biogenesis GTP-binding protein YsxC [Idiomarina loihiensis L2TR] gi|81600088|sp|Q5QXJ0|ENGB_IDILO RecName: Full=Probable GTP-binding protein EngB gi|56178149|gb|AAV80871.1| GTPase essential for cell cycle [Idiomarina loihiensis L2TR] Length = 206 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L +K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDISKLPPDSGIEVAFAGRSNAGKSSALNTLTRQKALARTSKTPGRTQLINVF-- 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 71 -------ELTTGQRLIDLPGYGFAKVPLAVKEKWQRSLSEYLQQRDSLKGIVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ DQ++ + + +LTK DKL + T+ K K + +V SS Sbjct: 124 FRETDQELIYWAVDCDLPVLALLTKADKLKQGARKSTVLKAKQAAIAF-NGDVQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 +KR G+E + + + Sbjct: 183 LKRIGVEQVEEKL 195 >gi|222100001|ref|YP_002534569.1| GTP-binding protein engB [Thermotoga neapolitana DSM 4359] gi|254783217|sp|B9K8C0|ENGB_THENN RecName: Full=Probable GTP-binding protein EngB gi|221572392|gb|ACM23204.1| GTP-binding protein engB [Thermotoga neapolitana DSM 4359] Length = 195 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 16/182 (8%) Query: 25 PKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 P PP E+AF GRSNVGKSSL+N L NRK +A S PG+T+ +NF++ Sbjct: 15 PGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-IAYVSKTPGKTRSINFYLVNS----- 68 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 VD+PGYGYA+ KK W L+ Y + R +L+ V+LL+D R ++ D Sbjct: 69 ----RYYFVDLPGYGYAKVSKKERVQWKKLVEDYFTNRWSLQMVFLLVDGRIPPQETDLM 124 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +L V + IVLTK+DK+ + ++ L++ K Y +IPTSSV +GI+ Sbjct: 125 MVEWLKSLNVPFTIVLTKMDKVKMSERKKKLDEHKKAFSKY--GEYTIIPTSSVTGEGID 182 Query: 201 VL 202 L Sbjct: 183 DL 184 >gi|242032515|ref|XP_002463652.1| hypothetical protein SORBIDRAFT_01g003620 [Sorghum bicolor] gi|241917506|gb|EER90650.1| hypothetical protein SORBIDRAFT_01g003620 [Sorghum bicolor] Length = 550 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/175 (41%), Positives = 100/175 (57%), Gaps = 11/175 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF+G SNVGKSSL+N L + + RTS+ PG TQ +NFF L + L LV Sbjct: 374 PEIAFAGVSNVGKSSLLNSLTRQWGVVRTSDKPGLTQTINFF------RLASKL---CLV 424 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A + +SW L+ Y+S R L V LL+ + G+K +D ++ +++ Sbjct: 425 DLPGYGFAYAKDEVKESWEELVKEYVSTRVGLERVCLLVHTKRGMKPLDYELVDLMERHK 484 Query: 150 VSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 YQIVLTK D + P A+ +E + L RN +P V+ SS GI LR Sbjct: 485 TPYQIVLTKTDLVFPIDVARRAMEIQESLKRNKSVVNP-VMMVSSKTGAGIRNLR 538 >gi|220928341|ref|YP_002505250.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium cellulolyticum H10] gi|254783192|sp|B8I8N7|ENGB_CLOCE RecName: Full=Probable GTP-binding protein EngB gi|219998669|gb|ACL75270.1| GTP-binding protein HSR1-related [Clostridium cellulolyticum H10] Length = 204 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/179 (39%), Positives = 99/179 (55%), Gaps = 15/179 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P G PEIAF GRSNVGKSS+IN LVNRK+LAR + PG+T+ +NFF V +F Sbjct: 19 PVTGFPEIAFVGRSNVGKSSIINTLVNRKSLARVGSTPGKTRQINFFDVNGEF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYG+A K+ SW LI YL R L+ V +L+D RH + D + Sbjct: 72 ---YLVDLPGYGFANVSKEMKASWQNLIETYLYSRKENFLKMVVMLVDIRHSPSKDDIIM 128 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +L + I+ K+DK+S + + +++ +VIP S+ R G+E Sbjct: 129 YQWLKGFGLDTLIIANKVDKISRGQIHVRINDIRKVLQ--LDDAEKVIPFSAENRFGLE 185 >gi|88858645|ref|ZP_01133286.1| GTP-binding protein [Pseudoalteromonas tunicata D2] gi|88818871|gb|EAR28685.1| GTP-binding protein [Pseudoalteromonas tunicata D2] Length = 219 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/153 (39%), Positives = 93/153 (60%), Gaps = 10/153 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 SA F+ P+I LP E+AF+GRSN GKSS +N L ++K +A+TS PGRTQ +N Sbjct: 9 SAATFITSAPDISKLPPDTGIEVAFAGRSNAGKSSSLNTLTDKK-IAKTSKTPGRTQLIN 67 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F +L +N M L+D+PGYGYA+ P + W + YL +R +L+ + +L+D Sbjct: 68 AF------DLGDN---MRLIDLPGYGYAKVPIEMKKKWQRSLGEYLEKRKSLKGLVILMD 118 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 RH +K +D+D+ ++ +S ++LTK DK Sbjct: 119 IRHPLKDLDKDLINWAVDSNISTLVLLTKADKF 151 >gi|169829417|ref|YP_001699575.1| GTP-binding protein [Lysinibacillus sphaericus C3-41] gi|168993905|gb|ACA41445.1| Probable GTP-binding protein [Lysinibacillus sphaericus C3-41] Length = 186 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 16/158 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE A +GRSNVGKSS IN ++ RK LAR S+ PG+TQ LNF+ ++ Sbjct: 12 PEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQTLNFYKIEE--------- 62 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K ++WG +I RY + R L+ V ++D RH D+ ++ F Sbjct: 63 QLFFVDVPGYGYAKVSKSEREAWGKMIERYFTGRQELKAVVQIVDLRHPPTADDRMMYDF 122 Query: 145 LDKKAVSYQIVLTKIDKL-------SPTTAQETLEKTK 175 L + ++ TK DK+ +ETLE K Sbjct: 123 LKHYNIPCIVIATKADKIPKGKWDKHKKIVKETLEMEK 160 >gi|315658065|ref|ZP_07910937.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus lugdunensis M23590] gi|315496394|gb|EFU84717.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus lugdunensis M23590] Length = 202 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 85/151 (56%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P EIA SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 28 PDTNLSEIALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDQ 78 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I Y++ R LR V L+D RH Q D ++++ Sbjct: 79 QLIFVDVPGYGYAKVSKSQREKFGKMIEEYITTRENLRLVIQLVDLRHDPTQDDILMYNY 138 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK+ Q+ L+ K Sbjct: 139 LKHFDIPTLVICTKEDKIPKGKVQKHLKNIK 169 >gi|134096290|ref|YP_001101365.1| ribosome biogenesis GTP-binding protein YsxC [Herminiimonas arsenicoxydans] gi|166225960|sp|A4G9Q7|ENGB_HERAR RecName: Full=Probable GTP-binding protein EngB gi|133740193|emb|CAL63244.1| Putative GTP-binding protein [Herminiimonas arsenicoxydans] Length = 239 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 102/211 (48%), Gaps = 16/211 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV- 72 F V + LP PEIAF+GRSN GKS+ INIL N+K L S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPNTQVPEIAFAGRSNAGKSTAINILSNQKKLCFASKTPGRTQHINYFSI 68 Query: 73 --------PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 KD + ++ + AM LVD+PGYGYA W L+ Y+ R L + Sbjct: 69 GGAHVGQHRKDETKVE-EIRAM-LVDLPGYGYAEVSGSAKHHWQALLGDYVQRREQLAAL 126 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D R +D + + +LTK DKL+ + L L+ +Y Sbjct: 127 VLIVDSRRPFTDLDIQMLEWFAPTGKPIHCILTKSDKLNRNESTNALRTANTLLASYVDE 186 Query: 185 HPEVIP-----TSSVKRKGIEVLRKAILETI 210 + + P S++KR GI+ ILE + Sbjct: 187 YGQPFPFTAQLFSALKRTGIDEANDKILELL 217 >gi|317129824|ref|YP_004096106.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cellulosilyticus DSM 2522] gi|315474772|gb|ADU31375.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cellulosilyticus DSM 2522] Length = 197 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 62/137 (45%), Positives = 81/137 (59%), Gaps = 10/137 (7%) Query: 27 AGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 AGP PE+A SGRSNVGKSS IN ++ RK LARTS PG+TQ LN++ F N + Sbjct: 20 AGPFPEVALSGRSNVGKSSFINTMLARKGLARTSQRPGKTQTLNWY----FINER----- 70 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD+PGYGYA+ K ++WG ++ Y ER L+ V LID RH + D ++ +L Sbjct: 71 FHFVDVPGYGYAKVSKSEREAWGRVMETYFQEREQLKGVVQLIDIRHKPTEDDVMMYDWL 130 Query: 146 DKKAVSYQIVLTKIDKL 162 IV TK DK+ Sbjct: 131 KHHEHPVLIVATKADKI 147 >gi|332704121|ref|ZP_08424209.1| GTP-binding protein engB [Desulfovibrio africanus str. Walvis Bay] gi|332554270|gb|EGJ51314.1| GTP-binding protein engB [Desulfovibrio africanus str. Walvis Bay] Length = 196 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 14/140 (10%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKN 81 LP A P+IA +GRSNVGKSSLIN L K LA+ S PG+T+ +N + P + Sbjct: 19 LPDA--PQIALAGRSNVGKSSLINALAGTKKLAKVSGTPGKTRSINLYHVSPAGYY---- 72 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYAR K+ SW LI Y+S+ ++L V +LIDCRH + +D ++ Sbjct: 73 ------LVDLPGYGYARCSKQERQSWASLIDAYISKATSLCAVAMLIDCRHSPQLLDLEL 126 Query: 142 FSFLDKKAVSYQIVLTKIDK 161 S+L + + +VLTK D+ Sbjct: 127 GSYLRQIGMPILVVLTKADQ 146 >gi|298529510|ref|ZP_07016913.1| ribosome biogenesis GTP-binding protein YsxC [Desulfonatronospira thiodismutans ASO3-1] gi|298510946|gb|EFI34849.1| ribosome biogenesis GTP-binding protein YsxC [Desulfonatronospira thiodismutans ASO3-1] Length = 206 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/178 (39%), Positives = 100/178 (56%), Gaps = 14/178 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV-PKDFSNLKNNLPAMAL 88 P+IA +GRSNVGKSSLIN L +K LAR S+ PG+T+ +NFF+ P++ L Sbjct: 23 PQIALAGRSNVGKSSLINSLAGQKKLARISSTPGKTRSINFFLAPQE---------NFYL 73 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYAR + + WG LI YL + L V LL+D R + D D+ ++D Sbjct: 74 VDLPGYGYARCSRVEREKWGELIQEYLQDNHHLAGVVLLLDSRISPQSSDLDLAHYVDSL 133 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VLTK DK + Q L++ + L+ AH ++ S+ R+G + L +AI Sbjct: 134 QTRLLPVLTKADKCNQKQRQLALKRWQKLLER---AHKPIL-FSARTRQGQQALLEAI 187 >gi|297821515|ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] gi|297324479|gb|EFH54899.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] Length = 300 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 96/191 (50%), Gaps = 12/191 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 116 PKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNK--------- 166 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +VD+PGYG+A+ W Y R TL C+ LLID ++ID D ++ Sbjct: 167 SWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDTLVCILLLIDASVPPQKIDLDCANW 226 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ---ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L + V V TK DK+ + E ++ + +IR HP I TSSV G + Sbjct: 227 LGRNNVPMTFVFTKCDKMKAAKGKRPDENIKAFQQIIRENFKVHPPWILTSSVSGLGRDE 286 Query: 202 LRKAILETINY 212 L + + NY Sbjct: 287 LLLHMSQLRNY 297 >gi|315125374|ref|YP_004067377.1| GTPase EngB [Pseudoalteromonas sp. SM9913] gi|315013887|gb|ADT67225.1| GTPase EngB [Pseudoalteromonas sp. SM9913] Length = 218 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 8/149 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDITKLPADTGIEVAFAGRSNAGKSSALNALTDQK-LARTSKTPGRTQLINTFEL 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D N M L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADVDN-------MRLIDLPGYGFAKVPIEMKKKWQKSLGEYLQKRQSLKGIVVLMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 +K +D+D+ ++ + +LTK DKL Sbjct: 125 LKDLDRDLINWAVGSEIPVLALLTKADKL 153 >gi|149181759|ref|ZP_01860250.1| GTP-binding protein [Bacillus sp. SG-1] gi|148850500|gb|EDL64659.1| GTP-binding protein [Bacillus sp. SG-1] Length = 196 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 88/146 (60%), Gaps = 9/146 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE A +GRSNVGKSS IN ++ RK++AR S+ PG+TQ LNF+ ++ ++ V Sbjct: 27 PEFALAGRSNVGKSSFINRMIGRKSMARISSRPGKTQTLNFYKIEE---------SLYFV 77 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ KK ++WG +I Y++ R L+ V ++D RH + D ++ FL Sbjct: 78 DVPGYGFAKVSKKEREAWGRMIETYITMREQLKAVIQIVDLRHPPTEDDIMMYDFLKHNG 137 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ TK Sbjct: 138 IPCVIIATKADKIPKGKWQKHLKVTK 163 >gi|91774588|ref|YP_544344.1| GTPase EngB [Methylobacillus flagellatus KT] gi|119369214|sp|Q1H4T4|ENGB_METFK RecName: Full=Probable GTP-binding protein EngB gi|91708575|gb|ABE48503.1| cell division checkpoint GTPase YihA [Methylobacillus flagellatus KT] Length = 207 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 12/178 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+ F+GRSN GKSS +N L N LA S PGRTQ +NFF +L N+ Sbjct: 19 LPAPAGIEVVFAGRSNAGKSSALNTLANHNRLAFVSKQPGRTQLINFF------SLGND- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ P+ W + YLS+R + + L++DCRH + +D+ + + Sbjct: 72 --RFLVDLPGYGYAKVPEAVRKHWQLTLASYLSQRPCIGGLVLVMDCRHPLTPLDRQMLN 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +LTK DKLS A +TL++ K L ++ ++ SS+K++G+E Sbjct: 130 WYSPSGKPIHALLTKADKLSRQAANQTLQQVRKELEASWGNCSVQLF--SSLKKQGVE 185 >gi|78356993|ref|YP_388442.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|119369190|sp|Q30ZZ9|ENGB_DESDG RecName: Full=Probable GTP-binding protein EngB gi|78219398|gb|ABB38747.1| Small GTP-binding protein domain [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 218 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/132 (43%), Positives = 81/132 (61%), Gaps = 8/132 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA +GRSNVGKSSL+N L RK LARTS+ PG+T+ +NF+ K + +V Sbjct: 23 PQIALAGRSNVGKSSLVNTLAGRKGLARTSSTPGKTRSINFY--------KVDPDGYYVV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYAR K + W LI RYL E + + +L+DCR +++D ++ +F + Sbjct: 75 DLPGYGYARCSKAEREKWAKLIRRYLVETPAVCAIAILLDCRLSPQKLDVELAAFARQAG 134 Query: 150 VSYQIVLTKIDK 161 + VLTK DK Sbjct: 135 LPLLPVLTKADK 146 >gi|302759126|ref|XP_002962986.1| hypothetical protein SELMODRAFT_77904 [Selaginella moellendorffii] gi|302824628|ref|XP_002993956.1| hypothetical protein SELMODRAFT_137934 [Selaginella moellendorffii] gi|300138228|gb|EFJ05003.1| hypothetical protein SELMODRAFT_137934 [Selaginella moellendorffii] gi|300169847|gb|EFJ36449.1| hypothetical protein SELMODRAFT_77904 [Selaginella moellendorffii] Length = 259 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 91/163 (55%), Gaps = 10/163 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +IF ++ +F+ G + +P A PEIAF+GR+N GKS LIN L + ARTS Sbjct: 65 IHQSIF-RNKQVFVAGAKVLSSIPPAELPEIAFAGRTNSGKSKLINALTRQYGRARTSPK 123 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG+T +NF+V + + LVDMPGY + + + L + Y++ R L Sbjct: 124 PGKTDSINFYVLGE---------KLCLVDMPGYSFMYGKQDQIQDLRQLNMDYITVRDHL 174 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 + V LLID G++Q DQ+ FL+ YQIVLTK DK+ P Sbjct: 175 KRVCLLIDAEWGIRQKDQEFIDFLESVNRKYQIVLTKTDKVLP 217 >gi|319956689|ref|YP_004167952.1| ribosome biogenesis GTP-binding protein ysxc [Nitratifractor salsuginis DSM 16511] gi|319419093|gb|ADV46203.1| ribosome biogenesis GTP-binding protein YsxC [Nitratifractor salsuginis DSM 16511] Length = 206 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/184 (38%), Positives = 103/184 (55%), Gaps = 18/184 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS-NLKNNLPAMALV 89 E+ F GRSNVGKSS IN+L RKNLA++S PG+T+ +NFF D L + + V Sbjct: 31 EVVFLGRSNVGKSSTINLLAGRKNLAKSSATPGKTRLINFF---DVGYKLDDKDYTVRFV 87 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD--- 146 D+PG+GYA+ K D W +V ++ R +R L D RH +ID+DV ++ Sbjct: 88 DLPGFGYAKVSKSMKDIWQKNLVEFIKNRVAIRLFIHLRDARHPHAKIDEDVARYIGEFL 147 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + Y V TK DKL+ ++ L+R+YP A I S++K+ G E +++AI Sbjct: 148 RPDQRYLTVFTKADKLNQ-------KERAALLRDYPGA----ILISNLKKTGQERIQQAI 196 Query: 207 LETI 210 ETI Sbjct: 197 FETI 200 >gi|327439427|dbj|BAK15792.1| predicted GTPase [Solibacillus silvestris StLB046] Length = 193 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 9/139 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P+ G PE A +GRSNVGKSS IN ++ RK +AR S+ PG+TQ LNF+ ++ Sbjct: 18 FPEDGLPEFALAGRSNVGKSSFINRMIGRKAMARISSKPGKTQQLNFYKIEE-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYGYA+ K +WG +I +Y R LR V L++D RH D ++ Sbjct: 70 -QLYYVDVPGYGYAKVSKSERAAWGRMIEQYFMGREQLRAVVLIVDIRHNPTSDDCMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKL 162 FL + +V TK DK+ Sbjct: 129 FLKHYNIPVIVVATKADKI 147 >gi|125546199|gb|EAY92338.1| hypothetical protein OsI_14063 [Oryza sativa Indica Group] Length = 571 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 92/157 (58%), Gaps = 16/157 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF+G SNVGKSSL+N L + + RTS+ PG TQ +NFF L + L LV Sbjct: 395 PEIAFAGVSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFF------RLASKL---CLV 445 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A + DSW L+ Y+S R L V LL+ + G+K +D ++ +++ Sbjct: 446 DLPGYGFAYAKDEVKDSWQELVKEYVSTRVGLERVCLLVHTKRGMKPLDYELVDLMERSK 505 Query: 150 VSYQIVLTKIDKLSPTTA-------QETLEKTKYLIR 179 YQIVLTK D + P QE+L+K K ++R Sbjct: 506 TPYQIVLTKTDLVFPIDVARRAVEIQESLKKNKSVVR 542 >gi|297544145|ref|YP_003676447.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841920|gb|ADH60436.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 192 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 103/175 (58%), Gaps = 12/175 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK P+I +GRSNVGKS+LIN ++NRKNLA+TS+ PG+T+ +NF+ L NN Sbjct: 19 PKDDLPQIVIAGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRGINFY-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K+ W I +L+ LR LLID R + D + ++ Sbjct: 70 KFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSRNLRHGLLLIDIRRVPTEDDLLMINW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 K + + +VLTK DK+S + AQ+ + K + + + EV+ S++++ G+ Sbjct: 130 FKYKNLPFTVVLTKADKVSKSQAQKAV---KDVCKIFNINREEVVVFSALEKIGV 181 >gi|224141797|ref|XP_002324249.1| predicted protein [Populus trichocarpa] gi|222865683|gb|EEF02814.1| predicted protein [Populus trichocarpa] Length = 316 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 100/193 (51%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE A GRSNVGKSSL+N +V RK LA TS PG+TQ +N F D Sbjct: 129 PSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQCINHFKVND--------- 179 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA AP++ W Y RSTL V+LLID K+ID + S+ Sbjct: 180 SWYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASW 239 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + V ++ TK DK +E + + + LIR++ P I TS V +G Sbjct: 240 LGQNQVPMTLIFTKCDKRKKKKNGGKRPEENVNEFQELIRDFFETAPPWIMTSGVTNQGR 299 Query: 200 EVLRKAILETINY 212 + + + + NY Sbjct: 300 DEMLLHMAQLRNY 312 >gi|114567167|ref|YP_754321.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338102|gb|ABI68950.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 219 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 9/144 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 +I LP PEIA +GRSNVGKSSLIN + NRKNLA++S+ PG+T+ +N+++ D Sbjct: 42 DINQLPVGNIPEIALAGRSNVGKSSLINKICNRKNLAKSSSTPGKTRTINYYLIND---- 97 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 +VD+PGYGYAR ++ W ++ YLS+R LR V L+D RH + D Sbjct: 98 -----QWFMVDLPGYGYARVSREEKARWKKMVEAYLSQREQLRGVIQLLDIRHEPGENDI 152 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLS 163 + +L + +V TK DKLS Sbjct: 153 LMKDWLLHLQIPVLVVATKADKLS 176 >gi|332525044|ref|ZP_08401225.1| GTP-binding protein YsxC [Rubrivivax benzoatilyticus JA2] gi|332108334|gb|EGJ09558.1| GTP-binding protein YsxC [Rubrivivax benzoatilyticus JA2] Length = 210 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 97/194 (50%), Gaps = 15/194 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV- 72 FL + LP+ PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N F Sbjct: 9 FLTTASRLDQLPQGELPEIAFVGRSNAGKSTAINTLAQQRRLAFASRTPGRTQHINLFEV 68 Query: 73 -PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 PKD P D+PGYGYA + W ++ +YL R L V L+ID R Sbjct: 69 GPKD-------APDALFADLPGYGYAAVERSAKLRWQEVMAQYLELRRALHGVVLMIDSR 121 Query: 132 HGVKQIDQDVFSFLDKKAVSYQI----VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 G +D+ + + + + + ++ VLTK DKL+ A L + ++ T E Sbjct: 122 LGFTDLDRRLLALIAPRVANGEVRLLAVLTKCDKLNRREADAALAGAQQVLAEIATESAE 181 Query: 188 --VIPTSSVKRKGI 199 V S++ R+G+ Sbjct: 182 IGVAQFSALSRRGL 195 >gi|303237178|ref|ZP_07323748.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella disiens FB035-09AN] gi|302482565|gb|EFL45590.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella disiens FB035-09AN] Length = 225 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/150 (42%), Positives = 85/150 (56%), Gaps = 9/150 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P I P E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 13 PTIAKCPNDTKNEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLINHFIIN---- 68 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 +VD+PGYGYA+ K + +I +YL +R L V++LID RH ++ID Sbjct: 69 -----KEWYIVDLPGYGYAKNSKTVRNKLEQMIAQYLLQRKQLVNVFVLIDIRHEQQKID 123 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 ++ +L K + + IV TK DKLS A+ Sbjct: 124 REFIDWLGKSNIPFSIVFTKADKLSVGKAK 153 >gi|326469475|gb|EGD93484.1| hypothetical protein TESG_01028 [Trichophyton tonsurans CBS 112818] Length = 320 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 88/139 (63%), Gaps = 9/139 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P++ PE+ F GRSNVGKSS+IN+LV +++ TS PGRTQ +N F +K Sbjct: 102 IPESDIPEVVFMGRSNVGKSSVINMLVG-EDICYTSATPGRTQTMNAF---GVGGMKGGE 157 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + ++D PGYG A P+ WG +++YLS+R LR V+L+I+C+ GVK D++V S Sbjct: 158 TKINIIDSPGYGKASRPE-----WGHELMKYLSKRQQLRRVFLIIECKAGVKNSDKEVLS 212 Query: 144 FLDKKAVSYQIVLTKIDKL 162 L + V +QI+++K D Sbjct: 213 ILREFTVPHQIIVSKADNF 231 >gi|116872987|ref|YP_849768.1| GTPase EngB [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458496|sp|A0AJ07|ENGB_LISW6 RecName: Full=Probable GTP-binding protein EngB gi|116741865|emb|CAK20989.1| GTP-binding protein, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 194 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 9/144 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ ++ Sbjct: 19 PETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH + D+ ++ F Sbjct: 70 ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTEDDRMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 L + +V TK DK+ + Q Sbjct: 130 LKYYEIPVIVVATKADKIPRSKWQ 153 >gi|327482756|gb|AEA86066.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas stutzeri DSM 4166] Length = 216 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 98/187 (52%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + NLARTS PGRTQ LNFF Sbjct: 16 FMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNFFRL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L V+L++D RH Sbjct: 75 DDERRL---------VDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLVGVFLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + D+ + + + + I+LTK DKL+ A+ L + IR A V S+ Sbjct: 126 LTEFDRMMLDWANASDMPLHILLTKSDKLAFGAAKNALLAIQRDIRKGWGADVSVQLFSA 185 Query: 194 VKRKGIE 200 KR+G+E Sbjct: 186 PKRQGVE 192 >gi|294788035|ref|ZP_06753279.1| ribosome biogenesis GTP-binding protein YsxC [Simonsiella muelleri ATCC 29453] gi|294484328|gb|EFG32011.1| ribosome biogenesis GTP-binding protein YsxC [Simonsiella muelleri ATCC 29453] Length = 210 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 100/196 (51%), Gaps = 15/196 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLPDT-PAEIAFVGRSNAGKSSAINTLCNHVRLAYVSKTPGRTQHINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +N +VD+PGYGYA+ P+ W L+ YL R L + L++D RH Sbjct: 66 -ELTN------GHFMVDLPGYGYAQVPEAIRTHWVKLLGDYLQTRRQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 +K +D + F I+L+K DKLS +TL ++ P + I Sbjct: 119 LKPLDIQMLDFFALTEKPVHILLSKADKLSKNEQIKTLASVHKQLK--PFTERQAISVQL 176 Query: 192 -SSVKRKGIEVLRKAI 206 SS+K++GI+ + + + Sbjct: 177 FSSLKKQGIDEVEETV 192 >gi|254237827|ref|ZP_04931150.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126169758|gb|EAZ55269.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 215 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P E+AF+GRSN GKSS +N L + NLARTS PGRTQ LNFFV Sbjct: 16 FLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNFFVL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA+ P W + YLS R++L V+L++D RH Sbjct: 75 DD---------SRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + + + +++TK DKL+ A+ L K + ++ + S+ Sbjct: 126 LTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQLFSA 185 Query: 194 VKRKGIE 200 KR+G++ Sbjct: 186 PKRQGVD 192 >gi|115456183|ref|NP_001051692.1| Os03g0816400 [Oryza sativa Japonica Group] gi|28876002|gb|AAO60011.1| putative GTP-binding protein [Oryza sativa Japonica Group] gi|108711752|gb|ABF99547.1| expressed protein [Oryza sativa Japonica Group] gi|113550163|dbj|BAF13606.1| Os03g0816400 [Oryza sativa Japonica Group] Length = 571 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 92/157 (58%), Gaps = 16/157 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF+G SNVGKSSL+N L + + RTS+ PG TQ +NFF L + L LV Sbjct: 395 PEIAFAGVSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFF------RLASKL---CLV 445 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A + DSW L+ Y+S R L V LL+ + G+K +D ++ +++ Sbjct: 446 DLPGYGFAYAKDEVKDSWQELVKEYVSTRVGLERVCLLVHTKRGMKPLDYELVDLMERSK 505 Query: 150 VSYQIVLTKIDKLSPTTA-------QETLEKTKYLIR 179 YQIVLTK D + P QE+L+K K ++R Sbjct: 506 TPYQIVLTKTDLVFPIDVARRAVEIQESLKKNKSVVR 542 >gi|313623624|gb|EFR93787.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua FSL J1-023] Length = 194 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 9/144 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ ++ Sbjct: 19 PETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH + D+ ++ F Sbjct: 70 ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTEDDRMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 L + +V TK DK+ + Q Sbjct: 130 LKYYEIPVIVVATKADKIPRSKWQ 153 >gi|119369275|sp|Q0AWF4|ENGB_SYNWW RecName: Full=Probable GTP-binding protein EngB Length = 193 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 9/144 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 +I LP PEIA +GRSNVGKSSLIN + NRKNLA++S+ PG+T+ +N+++ D Sbjct: 16 DINQLPVGNIPEIALAGRSNVGKSSLINKICNRKNLAKSSSTPGKTRTINYYLIND---- 71 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 +VD+PGYGYAR ++ W ++ YLS+R LR V L+D RH + D Sbjct: 72 -----QWFMVDLPGYGYARVSREEKARWKKMVEAYLSQREQLRGVIQLLDIRHEPGENDI 126 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLS 163 + +L + +V TK DKLS Sbjct: 127 LMKDWLLHLQIPVLVVATKADKLS 150 >gi|257463900|ref|ZP_05628286.1| GTP-binding protein [Fusobacterium sp. D12] gi|317061429|ref|ZP_07925914.1| GTP-binding protein [Fusobacterium sp. D12] gi|313687105|gb|EFS23940.1| GTP-binding protein [Fusobacterium sp. D12] Length = 204 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/181 (38%), Positives = 99/181 (54%), Gaps = 15/181 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E AF GRSNVGKSSLIN L +R LARTS PGRTQ +NFF+ +VD Sbjct: 26 EFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQLINFFIINQ---------EFYIVD 76 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYG+A+ PK WG I RY+ T + V++L+D R + D ++ +LD + Sbjct: 77 LPGYGFAKVPKAMKKEWGSTIERYIISART-KLVFVLLDIRRIPSEEDMEMLRWLDFHNL 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVKRKGIEVLRKAILET 209 ++I+ TK DK+S L++ IR H E V SS+ KG E + + + +T Sbjct: 136 PFKIIFTKTDKISNNEKFRLLKE----IRKKIEFHNEDVFFYSSLSHKGREEVLQFMEDT 191 Query: 210 I 210 + Sbjct: 192 L 192 >gi|257465979|ref|ZP_05630290.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 213 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 113/207 (54%), Gaps = 25/207 (12%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + KSA ++ + PEI E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 17 YLKSA-VYEKDYPEI-----LNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQ 70 Query: 67 HLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCV 124 +NFF + ++F +VD+PGYG+A+ PK WG I RY +S+R L V Sbjct: 71 LINFFTINQEF----------YIVDLPGYGFAKVPKAMKKEWGSTIERYIISKRKKL--V 118 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 ++L+D R + D ++ +LD + ++I+ TK DK+S L+ IR Sbjct: 119 FVLLDIRRIPSEEDMEMLRWLDFHELPFKIIFTKTDKISNNEKFRLLKD----IRKKIEF 174 Query: 185 HPE-VIPTSSVKRKGIEVLRKAILETI 210 H E V SS+ KG E + + + +T+ Sbjct: 175 HNEDVFFYSSLSHKGREEVLQFMEDTL 201 >gi|222626042|gb|EEE60174.1| hypothetical protein OsJ_13104 [Oryza sativa Japonica Group] Length = 694 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 92/157 (58%), Gaps = 16/157 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF+G SNVGKSSL+N L + + RTS+ PG TQ +NFF L + L LV Sbjct: 518 PEIAFAGVSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFF------RLASKL---CLV 568 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A + DSW L+ Y+S R L V LL+ + G+K +D ++ +++ Sbjct: 569 DLPGYGFAYAKDEVKDSWQELVKEYVSTRVGLERVCLLVHTKRGMKPLDYELVDLMERSK 628 Query: 150 VSYQIVLTKIDKLSPTTA-------QETLEKTKYLIR 179 YQIVLTK D + P QE+L+K K ++R Sbjct: 629 TPYQIVLTKTDLVFPIDVARRAVEIQESLKKNKSVVR 665 >gi|257452226|ref|ZP_05617525.1| GTP-binding protein [Fusobacterium sp. 3_1_5R] gi|315917135|ref|ZP_07913375.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|317058769|ref|ZP_07923254.1| GTP-binding protein [Fusobacterium sp. 3_1_5R] gi|313684445|gb|EFS21280.1| GTP-binding protein [Fusobacterium sp. 3_1_5R] gi|313691010|gb|EFS27845.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 204 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 113/207 (54%), Gaps = 25/207 (12%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + KSA ++ + PEI E AF GRSNVGKSSLIN L +R LARTS PGRTQ Sbjct: 8 YLKSA-VYEKDYPEI-----LNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQ 61 Query: 67 HLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCV 124 +NFF + ++F +VD+PGYG+A+ PK WG I RY +S+R L V Sbjct: 62 LINFFTINQEF----------YIVDLPGYGFAKVPKAMKKEWGSTIERYIISKRKKL--V 109 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 ++L+D R + D ++ +LD + ++I+ TK DK+S L+ IR Sbjct: 110 FVLLDIRRIPSEEDMEMLRWLDFHELPFKIIFTKTDKISNNEKFRLLKD----IRKKIEF 165 Query: 185 HPE-VIPTSSVKRKGIEVLRKAILETI 210 H E V SS+ KG E + + + +T+ Sbjct: 166 HNEDVFFYSSLSHKGREEVLQFMEDTL 192 >gi|154497948|ref|ZP_02036326.1| hypothetical protein BACCAP_01928 [Bacteroides capillosus ATCC 29799] gi|150272938|gb|EDN00095.1| hypothetical protein BACCAP_01928 [Bacteroides capillosus ATCC 29799] Length = 199 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 107/198 (54%), Gaps = 11/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R + P+ G P++ F+GRSNVGKSS+IN ++ RKNLAR APG+T H+N+F+ Sbjct: 10 FVRSAAKSADFPRDGLPQVVFAGRSNVGKSSVINKILLRKNLARVGAAPGKTTHINYFLI 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ + D WG LI + ++ + + +++D RH Sbjct: 70 DE---------KLYLVDLPGYGYAKVSQAERDRWGRLIESWFADNALMTLGIMVVDARHK 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + + + + +V K+DKL + + L + + + P +VI S+ Sbjct: 121 PTADDCTMAEWFKQSGKPFLVVANKLDKLRKSEIEPNLARIRETL-GLPD-DVKVIAFSA 178 Query: 194 VKRKGIEVLRKAILETIN 211 K +G + L IL+++ Sbjct: 179 EKGEGRQELLSEILKSMG 196 >gi|310822303|ref|YP_003954661.1| GTP-binding protein, EngB-like protein [Stigmatella aurantiaca DW4/3-1] gi|309395375|gb|ADO72834.1| GTP-binding protein, EngB-like protein [Stigmatella aurantiaca DW4/3-1] Length = 206 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 97/186 (52%), Gaps = 7/186 (3%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P E+AF GRSNVGKSS+IN L RK L R SN PGRT+ LNFF V D ++ + Sbjct: 20 PSGHSAEVAFVGRSNVGKSSMINTLTGRKKLVRVSNTPGRTRTLNFFDVELDRDGHRHQV 79 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L D+PGYG+A+A K + W +I YL +R L V +ID G D Sbjct: 80 ---RLADLPGYGFAKASKADRVQWNEMITTYLDKRHRLEAVVSIIDAEIGPTPDDLQTLD 136 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L +K +V TKID+L+ + ++ L + VI SSV + G++ + Sbjct: 137 YLQEKDRRVLVVATKIDRLAKARRKPRIQA---LAQQLDLPLEAVIAFSSVDKIGVDEVW 193 Query: 204 KAILET 209 A+L T Sbjct: 194 NALLGT 199 >gi|289434838|ref|YP_003464710.1| GTP-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|315303325|ref|ZP_07873954.1| ribosome biogenesis GTP-binding protein YsxC [Listeria ivanovii FSL F6-596] gi|289171082|emb|CBH27624.1| GTP-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313628305|gb|EFR96809.1| ribosome biogenesis GTP-binding protein YsxC [Listeria ivanovii FSL F6-596] gi|313633109|gb|EFS00007.1| ribosome biogenesis GTP-binding protein YsxC [Listeria seeligeri FSL N1-067] gi|313637682|gb|EFS03061.1| ribosome biogenesis GTP-binding protein YsxC [Listeria seeligeri FSL S4-171] Length = 194 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 55/138 (39%), Positives = 82/138 (59%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ ++ Sbjct: 19 PETDIPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH + D+ ++ F Sbjct: 70 ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTEDDRMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V TK DK+ Sbjct: 130 LKYYEIPVIVVATKADKI 147 >gi|149192614|ref|ZP_01870766.1| GTPase EngB [Vibrio shilonii AK1] gi|148833550|gb|EDL50635.1| GTPase EngB [Vibrio shilonii AK1] Length = 244 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 87/149 (58%), Gaps = 9/149 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N++ LA+TS PGRTQ +N F Sbjct: 41 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQRALAKTSKTPGRTQLINLFKV 100 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 101 DE---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRKCLKGLVVLMDIRHP 151 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 +K +DQ + + + + Q++LTK DKL Sbjct: 152 MKDLDQQLIQWAVESHIPVQVLLTKADKL 180 >gi|329897111|ref|ZP_08271856.1| GTP-binding protein EngB [gamma proteobacterium IMCC3088] gi|328921435|gb|EGG28824.1| GTP-binding protein EngB [gamma proteobacterium IMCC3088] Length = 211 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 67/173 (38%), Positives = 96/173 (55%), Gaps = 12/173 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS IN L K LARTS PGRTQ LNFF + LVD Sbjct: 37 EVAFAGRSNAGKSSAINSLTKNKKLARTSKTPGRTQLLNFFSLSE---------QQRLVD 87 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYG+A+ P +W + YL ER++L+ + LL+D RH ++ D+ + ++ + Sbjct: 88 LPGYGFAKVPVAMKKAWTEQLETYLQERASLKGLILLMDIRHPLQPFDEQLINWALSADM 147 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-SSVKRKGIEVL 202 I+LTK DKL Q T + + +++ P + T SS+K +G E L Sbjct: 148 PCHILLTKADKLKRGPQQSTKLQVEKVLK--PRGGKITVQTFSSLKHQGHEAL 198 >gi|303248057|ref|ZP_07334323.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio fructosovorans JJ] gi|302490614|gb|EFL50519.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio fructosovorans JJ] Length = 210 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 56/138 (40%), Positives = 81/138 (58%), Gaps = 8/138 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P P++A +GRSNVGKS+L+N L RK LA+ S PG+T+ LNF++ + Sbjct: 26 IPTVDAPQVALAGRSNVGKSTLVNCLAGRKGLAKISATPGKTRSLNFYMAQ--------A 77 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYAR + W LI YL + S LR V L+DCR +++D ++ Sbjct: 78 AGYCLVDLPGYGYARCSMAEREKWAKLIDSYLKKTSRLRAVTALVDCRLPPQRLDVELVD 137 Query: 144 FLDKKAVSYQIVLTKIDK 161 +L + + +VLTK DK Sbjct: 138 WLRARRMPVLVVLTKADK 155 >gi|146284373|ref|YP_001174526.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas stutzeri A1501] gi|145572578|gb|ABP81684.1| GTP-binding protein EngB [Pseudomonas stutzeri A1501] Length = 227 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/170 (40%), Positives = 93/170 (54%), Gaps = 10/170 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N L + NLARTS PGRTQ LNFF D L VD Sbjct: 44 EVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNFFRLDDERRL---------VD 93 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P W + YL R +L V+L++D RH + + D+ + + + + Sbjct: 94 LPGYGYAKVPIPLKQHWQRHLEAYLGSRESLVGVFLMMDIRHPLTEFDRMMLDWANASDM 153 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 I+LTK DKL+ A+ L + IR A V S+ KR+G+E Sbjct: 154 PLHILLTKSDKLAFGAAKNALLAIQRDIRKGWGADVSVQLFSAPKRQGVE 203 >gi|71064836|ref|YP_263563.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter arcticus 273-4] gi|71037821|gb|AAZ18129.1| cell division checkpoint GTPase YihA [Psychrobacter arcticus 273-4] Length = 302 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 9/189 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P L P E+AF+GRSN GKSS IN L N++ LAR+S PGRTQ +NFF Sbjct: 69 FMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQMINFFNV 128 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P + W + YL RS+L + L+ D RH Sbjct: 129 GD--------ADRRLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMTDIRHP 180 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + I+LTK DKL ++ L T+ ++ + + S+ Sbjct: 181 LKFFDEQMLRWAKDGELPVHILLTKADKLKYGASKNALLNTRKRLKQLGL-NCSIQLFSA 239 Query: 194 VKRKGIEVL 202 ++++G++ L Sbjct: 240 LRKEGLDEL 248 >gi|332971568|gb|EGK10518.1| ribosome biogenesis GTP-binding protein YsxC [Kingella kingae ATCC 23330] Length = 209 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 68/177 (38%), Positives = 94/177 (53%), Gaps = 10/177 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIAF GRSN GKSS IN L N LA S PGRTQH+NFF L N +VD Sbjct: 25 EIAFVGRSNAGKSSAINTLCNHVRLAYVSKTPGRTQHINFF------KLANQ---HFMVD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P+ W L+ YL R +L + L++D RH +K +D + F Sbjct: 76 LPGYGYAQVPEAVRAHWVKLLGDYLQTRQSLLGLVLIMDARHPLKPLDIQMLDFFALTGR 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTSSVKRKGIEVLRKAI 206 I+L+K DKLS +TL K ++ + V SS+K++GI+ + + + Sbjct: 136 PVHILLSKSDKLSKNEQIKTLSSVKKALKPFMERQTVSVQLFSSLKKQGIDEVEQVV 192 >gi|255568647|ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus communis] gi|223535455|gb|EEF37125.1| GTP-binding protein engB, putative [Ricinus communis] Length = 296 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 72/191 (37%), Positives = 94/191 (49%), Gaps = 12/191 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 112 PREDRPEFAILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLINHFLVNK--------- 162 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +VD+PGYG+A+AP W Y R TL V LLID ++ID D + Sbjct: 163 SWYIVDLPGYGFAKAPASAQTDWSSFTKGYFLNRETLVAVLLLIDASVPPQKIDLDCADW 222 Query: 145 LDKKAVSYQIVLTKIDKL---SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L + + V TK DK+ T E + + LIR HP I TSSV G + Sbjct: 223 LGRNNIPLTFVFTKCDKMKGGKSTRPDENIRNFQELIRQNYQEHPPWIMTSSVTGLGRDE 282 Query: 202 LRKAILETINY 212 L + + NY Sbjct: 283 LLLHMSQLRNY 293 >gi|115390012|ref|XP_001212511.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194907|gb|EAU36607.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 312 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 81/133 (60%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ +N F K + L+ Sbjct: 93 PEVAFLGRSNVGKSSLLNAVMG-KEMCWTSSKPGRTREMNAF---GIGGTKGGESKIVLL 148 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG K + WG I++YL R LR +LLID HG+KQ D D+ K A Sbjct: 149 DMPGYG-----KASRTEWGVEIMKYLQGRKQLRRAFLLIDSLHGIKQSDADILMLFRKYA 203 Query: 150 VSYQIVLTKIDKL 162 + +Q++L+K+DK+ Sbjct: 204 IPHQVILSKVDKV 216 >gi|210630152|ref|ZP_03296267.1| hypothetical protein COLSTE_00151 [Collinsella stercoris DSM 13279] gi|210160625|gb|EEA91596.1| hypothetical protein COLSTE_00151 [Collinsella stercoris DSM 13279] Length = 209 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 13/185 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P + PE++F GRSNVGKSS++N L NR++L + S+ PG+T ++NFF Sbjct: 22 IPPSTCPEVSFVGRSNVGKSSIMNKLFNRRSLVKVSSTPGKTANVNFF----------EA 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYG+A+ K D W LI + + V L+D RH ++D + Sbjct: 72 DGVHFVDLPGYGFAQRSKAERDRWARLIGDFFDSERSFNLVVSLVDIRHDPSKLDLQMID 131 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 FL + ++ + LTK DKLS + + ++ + + +I TSS GI+ L+ Sbjct: 132 FLRENGFNFIVCLTKADKLSKS---QQAKQAASIRKQIGVPADRLIVTSSESGLGIDKLK 188 Query: 204 KAILE 208 +AI++ Sbjct: 189 QAIVD 193 >gi|20807122|ref|NP_622293.1| GTPase [Thermoanaerobacter tengcongensis MB4] gi|254479256|ref|ZP_05092599.1| putative small GTP-binding protein domain protein [Carboxydibrachium pacificum DSM 12653] gi|24418374|sp|Q8RC22|ENGB_THETN RecName: Full=Probable GTP-binding protein EngB gi|20515616|gb|AAM23897.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4] gi|214034794|gb|EEB75525.1| putative small GTP-binding protein domain protein [Carboxydibrachium pacificum DSM 12653] Length = 194 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 104/180 (57%), Gaps = 13/180 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK P+IA G+SNVGKS+LIN ++ RKNLA+ S+ PG+T+ +NF++ Sbjct: 19 PKDKIPQIAIVGKSNVGKSTLINTVLGRKNLAKVSSTPGKTRGINFYLVN---------R 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A +VD+PGYGYA+ K+ W I +L+ L+ LLID R + D + ++ Sbjct: 70 AFYIVDLPGYGYAKVSKEMKKQWAYNIETFLNTSKNLKHALLLIDIRREPTEDDFMMVNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 K + + +VLTK DK++ + A + +E + R++ + VI S+V++ GI E+LR Sbjct: 130 FSFKNLPFSVVLTKADKVNKSEANKAIEN---ICRSFNISSDRVIVFSAVEKTGISEILR 186 >gi|257126668|ref|YP_003164782.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia buccalis C-1013-b] gi|257050607|gb|ACV39791.1| small GTP-binding protein [Leptotrichia buccalis C-1013-b] Length = 195 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 69/173 (39%), Positives = 95/173 (54%), Gaps = 15/173 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E +F GRSNVGKSSLIN L RK+LARTS PGRTQ +N+F+ D + VD Sbjct: 26 EFSFIGRSNVGKSSLINSLTKRKSLARTSKTPGRTQLINYFLIND---------KIHFVD 76 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 +PGYG+A+ P +WG I YL S R + V+LL+D R D ++ +L+ Sbjct: 77 LPGYGFAKVPDAVKKNWGKTIESYLISNRE--KVVFLLLDLRRVPSNEDMEMLKWLEHFG 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + Y I+ TK DKLS E ++ K + + + +V SS+K G E L Sbjct: 135 IEYYIIFTKADKLS---NNEKFKQLKEIRKKLVFKNEDVFFYSSLKNTGREEL 184 >gi|160872432|ref|ZP_02062564.1| GTP-binding protein EngB [Rickettsiella grylli] gi|159121231|gb|EDP46569.1| GTP-binding protein EngB [Rickettsiella grylli] Length = 199 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 88/163 (53%), Gaps = 9/163 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ V ++ LP EIAF GRSN GKSS IN + +K LA+ S PGRTQ LNFF Sbjct: 10 LFLKSVAQLDQLPPDKGAEIAFIGRSNSGKSSAINAITGKKGLAKISKTPGRTQLLNFF- 68 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 L NL LVD+PGYG+A+ W I YL R +L+ + + +D RH Sbjct: 69 -----QLNENL---RLVDLPGYGFAKVSDNRKIDWEKTITHYLKMRKSLKGLIMTMDIRH 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + D+ + +F+ + I+LTK DKL+ A TL + Sbjct: 121 PLNDRDEVLLAFVSHYHIPTYILLTKADKLTRAQAIHTLRSIR 163 >gi|302039585|ref|YP_003799907.1| GTP-binding protein EngB [Candidatus Nitrospira defluvii] gi|300607649|emb|CBK43982.1| GTP-binding protein EngB [Candidatus Nitrospira defluvii] Length = 200 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/133 (48%), Positives = 85/133 (63%), Gaps = 4/133 (3%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIAF GRSNVGKSSLIN L++RK LA+ S PG+T+ +NFF + S+ K +L ++LV Sbjct: 24 PEIAFVGRSNVGKSSLINSLLHRKKLAKVSKTPGKTRAVNFFTVRT-SDPKLSL--LSLV 80 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K WG +I +YL +R +L V LLI+ R + Q D ++ Sbjct: 81 DLPGYGYAKVSKTMRAQWGPMIEQYLEQRQSLGAVILLIEARVWMPQ-DVMTVQWVQSLG 139 Query: 150 VSYQIVLTKIDKL 162 IVLTK DKL Sbjct: 140 CGMIIVLTKADKL 152 >gi|291166319|gb|EFE28365.1| ribosome biogenesis GTP-binding protein YsxC [Filifactor alocis ATCC 35896] Length = 203 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 102/186 (54%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK ++AF GRSNVGKSS IN L+NRK++AR S +PG+T+ +NF+ + Sbjct: 19 PKDDFLQVAFVGRSNVGKSSAINTLLNRKSIARVSQSPGKTRTINFYSVNE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ K+ + WG ++ RY E L ++LL+D RH K D ++ F Sbjct: 70 QFYFVDLPGYGYAKLSKEEQEGWGKMMERYFIESPNLIHLFLLVDIRHEPKDSDVQMYQF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVL 202 + ++ TK DK++ + Q+ + +IR + +V SS+K+ G E + Sbjct: 130 AHHWNIPITVIATKSDKINRSQLQKNIS----VIRKKLNLLSGEDVFMISSLKKTGKEEI 185 Query: 203 RKAILE 208 I++ Sbjct: 186 WSKIID 191 >gi|300911695|ref|ZP_07129139.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus TCH70] gi|300887116|gb|EFK82317.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus TCH70] Length = 196 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 21 PKTELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Q D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDPTQDDILMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK+ Q+ ++ K Sbjct: 132 LKHFDIPTLVICTKEDKIPKGKVQKHIKNIK 162 >gi|296814868|ref|XP_002847771.1| GTPase EngB [Arthroderma otae CBS 113480] gi|238840796|gb|EEQ30458.1| GTPase EngB [Arthroderma otae CBS 113480] Length = 375 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/137 (42%), Positives = 87/137 (63%), Gaps = 9/137 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P++ PE+ F GRSNVGKSS+IN+LV +N+ TS PGRTQ +N F K Sbjct: 157 IPESDTPEVVFMGRSNVGKSSVINMLVG-ENICYTSATPGRTQTMNAFA---VGGKKGGE 212 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + ++D PGYG A P+ WG +++YLS+R LR V+L+I+C+ GVK D++V S Sbjct: 213 SKINIIDSPGYGKASRPE-----WGHELMKYLSKRKQLRRVFLIIECKAGVKNSDKEVLS 267 Query: 144 FLDKKAVSYQIVLTKID 160 L + + +QI+++K D Sbjct: 268 ILREFTIPHQIIVSKAD 284 >gi|332533754|ref|ZP_08409612.1| GTP-binding protein EngB [Pseudoalteromonas haloplanktis ANT/505] gi|332036809|gb|EGI73271.1| GTP-binding protein EngB [Pseudoalteromonas haloplanktis ANT/505] Length = 222 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 91/149 (61%), Gaps = 8/149 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDITKLPADTGIEVAFAGRSNAGKSSALNALTDQK-LARTSKTPGRTQLINTF-- 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +++ + M L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 70 -DLADVDD----MRLIDLPGYGFAKVPIEMKKKWQKSLGEYLQKRQSLKGIVILMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 +K +D+D+ ++ + +LTK DKL Sbjct: 125 LKDLDRDLINWAIGSEIPVLALLTKADKL 153 >gi|16800661|ref|NP_470929.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua Clip11262] gi|24418385|sp|Q92BF6|ENGB_LISIN RecName: Full=Probable GTP-binding protein EngB gi|16414080|emb|CAC96824.1| lin1593 [Listeria innocua Clip11262] gi|313618752|gb|EFR90657.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua FSL S4-378] Length = 194 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 9/144 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ ++ Sbjct: 19 PETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH + D+ ++ F Sbjct: 70 ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTEDDRMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 L + +V TK DK+ + Q Sbjct: 130 LKYYDIPVIVVATKADKIPRSKWQ 153 >gi|46907788|ref|YP_014177.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes serotype 4b str. F2365] gi|47093095|ref|ZP_00230872.1| GTP-binding protein [Listeria monocytogenes str. 4b H7858] gi|47096723|ref|ZP_00234308.1| GTP-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|217964295|ref|YP_002349973.1| YsxC [Listeria monocytogenes HCC23] gi|226224159|ref|YP_002758266.1| hypothetical GTP binding protein [Listeria monocytogenes Clip81459] gi|254824383|ref|ZP_05229384.1| GTPase EngB [Listeria monocytogenes FSL J1-194] gi|254898275|ref|ZP_05258199.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes J0161] gi|254912232|ref|ZP_05262244.1| GTPase EngB [Listeria monocytogenes J2818] gi|254931498|ref|ZP_05264857.1| GTPase EngB [Listeria monocytogenes HPB2262] gi|254936560|ref|ZP_05268257.1| GTPase EngB [Listeria monocytogenes F6900] gi|254993455|ref|ZP_05275645.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes FSL J2-064] gi|255520161|ref|ZP_05387398.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes FSL J1-175] gi|290893959|ref|ZP_06556935.1| GTPase EngB [Listeria monocytogenes FSL J2-071] gi|300764776|ref|ZP_07074766.1| GTP-binding protein [Listeria monocytogenes FSL N1-017] gi|67460317|sp|Q71ZB0|ENGB_LISMF RecName: Full=Probable GTP-binding protein EngB gi|254783204|sp|B8DHJ0|ENGB_LISMH RecName: Full=Probable GTP-binding protein EngB gi|259645902|sp|C1KVK5|ENGB_LISMC RecName: Full=Probable GTP-binding protein EngB gi|46881057|gb|AAT04354.1| GTP-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|47014907|gb|EAL05855.1| GTP-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|47018535|gb|EAL09291.1| GTP-binding protein [Listeria monocytogenes str. 4b H7858] gi|217333565|gb|ACK39359.1| YsxC [Listeria monocytogenes HCC23] gi|225876621|emb|CAS05330.1| Putative hypothetical GTP binding protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258609154|gb|EEW21762.1| GTPase EngB [Listeria monocytogenes F6900] gi|290556497|gb|EFD90035.1| GTPase EngB [Listeria monocytogenes FSL J2-071] gi|293583050|gb|EFF95082.1| GTPase EngB [Listeria monocytogenes HPB2262] gi|293590207|gb|EFF98541.1| GTPase EngB [Listeria monocytogenes J2818] gi|293593618|gb|EFG01379.1| GTPase EngB [Listeria monocytogenes FSL J1-194] gi|300514452|gb|EFK41509.1| GTP-binding protein [Listeria monocytogenes FSL N1-017] gi|307571139|emb|CAR84318.1| GTPase/GTP-binding protein [Listeria monocytogenes L99] gi|328465593|gb|EGF36822.1| GTP-binding protein YsxC [Listeria monocytogenes 1816] gi|332312000|gb|EGJ25095.1| Putative GTP-binding protein engB [Listeria monocytogenes str. Scott A] Length = 194 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 9/144 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ ++ Sbjct: 19 PETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH + D+ ++ F Sbjct: 70 ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTEDDRMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 L + +V TK DK+ + Q Sbjct: 130 LKYYDIPVIVVATKADKIPRSKWQ 153 >gi|262052247|ref|ZP_06024452.1| GTP-binding protein [Staphylococcus aureus 930918-3] gi|259159848|gb|EEW44887.1| GTP-binding protein [Staphylococcus aureus 930918-3] Length = 196 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 9/154 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 18 GQYPETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------N 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Q D + Sbjct: 69 IDEQLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDPTQDDILM 128 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +++L + ++ TK DK+ Q+ ++ K Sbjct: 129 YNYLKHFDIPTLVICTKEDKIPKGKVQKHIKNIK 162 >gi|255024637|ref|ZP_05296623.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes FSL J1-208] Length = 194 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 9/144 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ ++ Sbjct: 19 PETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH + D+ ++ F Sbjct: 70 ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTEDDRMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 L + +V TK DK+ + Q Sbjct: 130 LKYYDIPVIVVATKADKIPRSKWQ 153 >gi|77164078|ref|YP_342603.1| GTP-binding protein [Nitrosococcus oceani ATCC 19707] gi|254435111|ref|ZP_05048618.1| GTPase, putative [Nitrosococcus oceani AFC27] gi|119369224|sp|Q3JDM3|ENGB_NITOC RecName: Full=Probable GTP-binding protein EngB gi|76882392|gb|ABA57073.1| cell division checkpoint GTPase YihA [Nitrosococcus oceani ATCC 19707] gi|207088222|gb|EDZ65494.1| GTPase, putative [Nitrosococcus oceani AFC27] Length = 200 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 14/190 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+GRSNVGKSS IN + LARTS PGRTQ +NFF L Sbjct: 20 LPPDEGMEVAFAGRSNVGKSSAINAITGIGGLARTSKTPGRTQMINFF----------QL 69 Query: 84 PAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 A LVD+PGYGYA+ P+ W + YL +R L + L++D R + D + Sbjct: 70 DARRYLVDLPGYGYAKVPEAVKRQWQQTLSAYLEQRRALCGIVLVVDIRRLYQPFDLQML 129 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + + + +I+LTK DKL A + L+K T +L +P A ++ S+V GIE Sbjct: 130 EWCRSRGLPVRILLTKSDKLKRGAANQALQKATTHLQEVFPMARVQLF--SAVNHTGIEA 187 Query: 202 LRKAILETIN 211 ++ + E + Sbjct: 188 IQAQLDEWLG 197 >gi|152981348|ref|YP_001355067.1| ribosome biogenesis GTP-binding protein YsxC [Janthinobacterium sp. Marseille] gi|166225961|sp|A6T3H0|ENGB_JANMA RecName: Full=Probable GTP-binding protein EngB gi|151281425|gb|ABR89835.1| GTP-binding protein EngB [Janthinobacterium sp. Marseille] Length = 235 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 106/211 (50%), Gaps = 16/211 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV- 72 F V + LPK PEIAF+GRSN GKS+ INIL N+K LA S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPKTQVPEIAFAGRSNAGKSTAINILCNQKKLAFASKTPGRTQHINYFSI 68 Query: 73 --------PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 KD + + + + A+ LVD+PGYGYA W L+ Y+ R L + Sbjct: 69 GGAHVGQHRKDETKV-DEIRAL-LVDLPGYGYAEVSGSAKLHWQELLGDYVQRREQLAAL 126 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D R ++D + + +LTK DKL+ A L + ++ +Y Sbjct: 127 VLIVDSRRPFTELDIQMLEWFAPTGKPIHCLLTKSDKLNRNDAANALRTARTILGSYVDE 186 Query: 185 HPEVIP-----TSSVKRKGIEVLRKAILETI 210 + + P S++KR G++ I+E + Sbjct: 187 NGQPFPFTAQMFSALKRSGLDEANDKIIELL 217 >gi|21283346|ref|NP_646434.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MW2] gi|24418368|sp|Q8NW73|ENGB_STAAW RecName: Full=Probable GTP-binding protein EngB gi|21204786|dbj|BAB95482.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 196 Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 21 PKTELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Q D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDPTQDDILMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK+ Q+ ++ K Sbjct: 132 LKHFDIPTLVICTKEDKIPKGKVQKHIKNIK 162 >gi|297583716|ref|YP_003699496.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus selenitireducens MLS10] gi|297142173|gb|ADH98930.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus selenitireducens MLS10] Length = 212 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 75/133 (56%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+A SGRSNVGKSS IN L+NRK LARTS PG+TQ LNF++ D V Sbjct: 24 PEVALSGRSNVGKSSFINTLINRKGLARTSQRPGKTQTLNFYIIND---------RFHFV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K +WG + Y S R L V LID RH + D ++ +L Sbjct: 75 DVPGYGYAKVSKAERAAWGKTLELYFSSREQLNGVVQLIDSRHKPSEDDILMYDWLKHHG 134 Query: 150 VSYQIVLTKIDKL 162 ++ TK DK+ Sbjct: 135 HKVVLIATKCDKI 147 >gi|317486703|ref|ZP_07945520.1| ribosome biogenesis GTP-binding protein YsxC [Bilophila wadsworthia 3_1_6] gi|316922086|gb|EFV43355.1| ribosome biogenesis GTP-binding protein YsxC [Bilophila wadsworthia 3_1_6] Length = 211 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 100/185 (54%), Gaps = 17/185 (9%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFS 77 ++ +L + +IA +GRSNVGKSSL+N L RK LA+ S PG+T+ +NF+ P FS Sbjct: 24 QLSVLEQRQEAQIALAGRSNVGKSSLVNALARRKQLAKISATPGKTRSINFYRVAPDGFS 83 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA+ ++ SW LI YL+ TL+ + LL+DCR + + Sbjct: 84 ----------LVDLPGYGYAKCSQEERKSWAKLIEYYLTNTPTLKALALLLDCRIPPQAL 133 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+D+ F + VLTK DK T E ++ + R P +P SS + Sbjct: 134 DRDLADFARGHGIPLLPVLTKADK---CTQVERSKRQQEWSRLLNGIMP--LPVSSKDMR 188 Query: 198 GIEVL 202 G++ L Sbjct: 189 GVDAL 193 >gi|221135266|ref|ZP_03561569.1| GTP-binding protein [Glaciecola sp. HTCC2999] Length = 216 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/158 (39%), Positives = 87/158 (55%), Gaps = 11/158 (6%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 T +TK+ FL P+I L ++ E+AF+GRSN GKSS +N L +KNLARTS PGR Sbjct: 2 TYYTKAK--FLTSAPDIQHLDQSSGVEVAFAGRSNAGKSSALNTLTRQKNLARTSKTPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F D LVD+PGYG+A+ P W + YL +R + + Sbjct: 60 TQLINVFELDDDRR---------LVDLPGYGFAKVPLAMKLKWQKALGEYLQKRECIAGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 +L+D RH K +DQD+ + + +LTK DKL Sbjct: 111 VVLMDIRHPFKDLDQDLIQWAVNADIPVLALLTKADKL 148 >gi|94501575|ref|ZP_01308092.1| GTP-binding protein [Oceanobacter sp. RED65] gi|94426258|gb|EAT11249.1| GTP-binding protein [Oceanobacter sp. RED65] Length = 200 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P I P+ E+AF+GRSN GKSS +N L + LARTS PGRTQ +NFF Sbjct: 10 FLISAPSIRQCPEDNGAEVAFAGRSNAGKSSALNTLAQQNKLARTSKTPGRTQLINFFEI 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYG+A+ P++ W + YL +R +L+ + L++D RH Sbjct: 70 EE---------GLRLVDLPGYGFAKVPERMKREWQKNMSEYLEQRKSLKAMVLVMDIRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + D + + + I+LTK DKL A T K K ++ V S+ Sbjct: 121 LSEFDLMMCQWALDCNMPTHILLTKADKLKKGPANSTKLKVKKELKEMGDLLT-VQTFSA 179 Query: 194 VKRKGIEVLR 203 +KR G++ LR Sbjct: 180 LKRDGVDQLR 189 >gi|127514643|ref|YP_001095840.1| GTPase EngB [Shewanella loihica PV-4] gi|166225981|sp|A3QJD3|ENGB_SHELP RecName: Full=Probable GTP-binding protein EngB gi|126639938|gb|ABO25581.1| cell division checkpoint GTPase YihA [Shewanella loihica PV-4] Length = 218 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 14/189 (7%) Query: 14 FLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I L + P EIAF+GRSN GKSS +N L +KNLARTS PGRTQ +N Sbjct: 13 FLISAPDIAHLDEHLPGDVGVEIAFAGRSNAGKSSALNQLTEQKNLARTSKTPGRTQLIN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + L VD+PGYG+A+ P W + +YL ER+ L + +L+D Sbjct: 73 VFALDEHRRL---------VDLPGYGFAQVPLAMKKKWQQALGQYLQERACLSGLVVLMD 123 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +D + + + +LTK DKL+ + +T+ + + ++ +V Sbjct: 124 IRHPLKDLDMQMIEWAVDCDIPVLALLTKCDKLAQSARMKTVNDVRKALADFGDG-VKVE 182 Query: 190 PTSSVKRKG 198 P SS+K G Sbjct: 183 PFSSLKGTG 191 >gi|326204724|ref|ZP_08194579.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium papyrosolvens DSM 2782] gi|325985095|gb|EGD45936.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium papyrosolvens DSM 2782] Length = 204 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/179 (37%), Positives = 99/179 (55%), Gaps = 15/179 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P G EIAF+GRSNVGKSS+IN LVNRK+LAR + PG+T+ +NFF V ++F Sbjct: 19 PVTGFSEIAFAGRSNVGKSSIINTLVNRKSLARVGSTPGKTRQINFFSVNENF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYG+A K+ SW +I YL R L+ V LL+D RH + D + Sbjct: 72 ---YLVDLPGYGFASVSKEMKASWSNIIETYLYSRKENFLKMVVLLVDIRHSPSKDDITM 128 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +L + I+ K DK++ + + +++ +VIP S+ R G+E Sbjct: 129 YQWLKGFGLKTLIIANKADKITRGQINPRINDIRKVLQ--LDGDEKVIPFSTSNRLGLE 185 >gi|289577857|ref|YP_003476484.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter italicus Ab9] gi|289527570|gb|ADD01922.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter italicus Ab9] Length = 192 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 104/175 (59%), Gaps = 12/175 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK P+I +GRSNVGKS+LIN ++NRKNLA+TS+ PG+T+ +NF+ L NN Sbjct: 19 PKDDLPQIVIAGRSNVGKSTLINTVLNRKNLAKTSSRPGKTRGINFY-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K+ + W I +L+ LR LLID R + D + ++ Sbjct: 70 KFYLVDLPGYGYAKVSKEMKNQWAHNIETFLNTSRNLRHGLLLIDIRRVPTEDDLLMINW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 K + + +VLTK DK++ + AQ+ + K + + + EV+ S++++ G+ Sbjct: 130 FKYKNLPFTVVLTKADKVNKSQAQKAV---KDVCKIFNINREEVVIFSALEKIGV 181 >gi|297836256|ref|XP_002886010.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] gi|297331850|gb|EFH62269.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] Length = 300 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 95/186 (51%), Gaps = 12/186 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIA GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ + +V Sbjct: 121 PEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNK---------SWYIV 171 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ W Y R TL CV LLID ++ID D ++L + Sbjct: 172 DLPGYGFAKVSDAAKTDWSAFTKGYFLNRDTLVCVLLLIDASVPPQKIDLDCANWLGRNN 231 Query: 150 VSYQIVLTKIDKLSPTTAQ---ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V V TK DK+ T + E ++ + +I+ HP I TSSV G + L + Sbjct: 232 VQMTFVFTKCDKMKATKGKRPDENIKAFQQIIKENFKVHPPWILTSSVSGLGRDELLLHM 291 Query: 207 LETINY 212 + NY Sbjct: 292 SQLRNY 297 >gi|31747868|gb|AAN10193.1| probable GTP-binding protein [Candidatus Fritschea bemisiae] Length = 197 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 10/152 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ PEIA GRSNVGKSSLIN L+N K LA+ S+ PG+TQ +N+F+ + Sbjct: 21 LPRLNLPEIAIVGRSNVGKSSLINHLLNAKGLAKVSSTPGKTQRINYFIVDE-------- 72 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 A+ LVD+PGYGYA A K+ +WG I YL R L+ + L+D R + + D Sbjct: 73 -ALLLVDLPGYGYAAASKQIQKNWGLWIDTYLKNRE-LKGLLFLLDSRRELTREDAQFLR 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + + +S +VLTK DKLS L++ + Sbjct: 131 WASYENLSLLLVLTKADKLSQKEKHGALKRIQ 162 >gi|325527201|gb|EGD04592.1| GTP-binding protein YsxC [Burkholderia sp. TJI49] Length = 219 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 94/181 (51%), Gaps = 9/181 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 20 LPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + +D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP----TAHPEVIPTSSVKRKGI 199 + +LTK DKL+ + L T+ + Y T V S++KR G+ Sbjct: 135 WFAPTGKPIHTLLTKCDKLTRQESINALRTTQKGLDAYRDQGVTGKLTVQLFSALKRTGL 194 Query: 200 E 200 + Sbjct: 195 D 195 >gi|228475204|ref|ZP_04059930.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus hominis SK119] gi|314936222|ref|ZP_07843569.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus hominis subsp. hominis C80] gi|228270815|gb|EEK12217.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus hominis SK119] gi|313654841|gb|EFS18586.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus hominis subsp. hominis C80] Length = 196 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 101/187 (54%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ EIA SGRSNVGKSS IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 21 PETNLTEIALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I YL++R L V L+D RH + D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKSQREKFGKMIEEYLTKRENLGLVIQLVDLRHNPTEDDVLMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + ++ TK DK++ Q+ ++ K + P + +I SS++ + + Sbjct: 132 LKHFDLPTLVICTKEDKIAKGKVQKHIKNIKQKLDLDP--NDTIISYSSIQNSKQQYIWD 189 Query: 205 AILETIN 211 I IN Sbjct: 190 IIANYIN 196 >gi|152994783|ref|YP_001339618.1| HSR1-like GTP-binding protein [Marinomonas sp. MWYL1] gi|150835707|gb|ABR69683.1| GTP-binding protein HSR1-related [Marinomonas sp. MWYL1] Length = 214 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ ++ P E+AF+GRSN GKS+ +N L N+K LARTS PGRTQ +N F Sbjct: 13 FIKSAEKLSQCPLDQGVEVAFAGRSNAGKSTALNTLTNQKKLARTSKTPGRTQLINCF-- 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N+ L+D+PGYG+A+ P W + YL R +L V L++D RH Sbjct: 71 ------GLNVDDRRLIDLPGYGFAKVPIAMKKVWQAHMQDYLMNRRSLAGVVLVMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+ + + + ++LTK DKL A+ T + +++N V SS Sbjct: 125 LKEFDEMMLDWAKSNRMKVHVLLTKSDKLKRGPAKSTQLGVQKVLKNL-GVDGSVQTFSS 183 Query: 194 VKRKGIEVLRKAILE 208 + G++VLR + E Sbjct: 184 LSGDGVDVLRIKLAE 198 >gi|332991520|gb|AEF01575.1| GTP-binding protein YsxC [Alteromonas sp. SN2] Length = 205 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 85/149 (57%), Gaps = 9/149 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P+I L E+AF+GRSN GKSS +N L +KNLARTS PGRTQ +N F Sbjct: 9 FFTSAPDIRHLKDDSGIEVAFAGRSNAGKSSALNTLTRQKNLARTSKTPGRTQLINVF-- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 NL+ + LVD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 67 ----NLEED---RRLVDLPGYGFAQVPLAMKNKWQQALGEYLQKRKSLKGLVVLMDIRHP 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 K +DQD+ + + +LTK DKL Sbjct: 120 FKDLDQDLIHWAVDSNIPVLALLTKSDKL 148 >gi|332289351|ref|YP_004420203.1| ribosome biogenesis GTP-binding protein YsxC [Gallibacterium anatis UMN179] gi|330432247|gb|AEC17306.1| ribosome biogenesis GTP-binding protein YsxC [Gallibacterium anatis UMN179] Length = 204 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 10/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ I LP E+AF+GRSN GKS+ +N L N+KNLA+TS PGRTQ +N F Sbjct: 13 FVMSAANIRQLPADAGVEVAFAGRSNAGKSTALNTLANQKNLAKTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N K ++D+PGYGYA P+K W + YL +R L V +L+D RH Sbjct: 73 SE--NCK-------IIDLPGYGYAAVPEKVKLQWQKSLGEYLQQRQCLGGVVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DK+S + + + + I + +V SS Sbjct: 124 LKDLDQQMIEWAVSADLPILLLLTKADKVSQSERSKQVRMVREAILPF-QGDIQVEVFSS 182 Query: 194 VKRKGIEVLRKAILE 208 R G++ L + + E Sbjct: 183 QSRLGVDKLAQKLDE 197 >gi|161523460|ref|YP_001578472.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans ATCC 17616] gi|189351767|ref|YP_001947395.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans ATCC 17616] gi|221213467|ref|ZP_03586442.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD1] gi|238687016|sp|A9ADM4|ENGB_BURM1 RecName: Full=Probable GTP-binding protein EngB gi|160340889|gb|ABX13975.1| GTP-binding protein HSR1-related [Burkholderia multivorans ATCC 17616] gi|189335789|dbj|BAG44859.1| GTP-binding protein [Burkholderia multivorans ATCC 17616] gi|221166919|gb|EED99390.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD1] Length = 219 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 85/158 (53%), Gaps = 5/158 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 20 LPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + ++D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSTYLATRSQLCGLILMMDSRRPLTELDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +LTK DKL+ + L T+ + Y Sbjct: 135 WFAPTGKPIHTLLTKCDKLTRQESINALRTTQKGLDAY 172 >gi|157164919|ref|YP_001467169.1| GTPase EngB [Campylobacter concisus 13826] gi|112801424|gb|EAT98768.1| GTP-binding protein [Campylobacter concisus 13826] Length = 204 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 104/201 (51%), Gaps = 18/201 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P I P E+ F GRSNVGKSSLIN LVN+KNLA++S+ PG+TQ +NFF Sbjct: 9 FITSSPSIKEAPSFVTSEVVFLGRSNVGKSSLINALVNQKNLAKSSSTPGKTQLINFFEA 68 Query: 74 K----DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 + + + LVD+PG+GYA+ K D W + +L RS +R LID Sbjct: 69 EFCEQKDEQEEKEKFKLILVDLPGFGYAKVAKSKHDEWRKNLDEFLKFRSDIRLFIHLID 128 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RH ID +V S+L + Q +L TK DKL+ + ++ P Sbjct: 129 ARHFDLDIDVNVDSYLKSFLRADQKILNLYTKSDKLNQSQKSAIMK-----------FDP 177 Query: 187 EVIPTSSVKRKGIEVLRKAIL 207 I S++ + GI+ R+AI+ Sbjct: 178 SGILVSTLSKSGIDKAREAII 198 >gi|16803598|ref|NP_465083.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes EGD-e] gi|224499784|ref|ZP_03668133.1| GTPase EngB [Listeria monocytogenes Finland 1988] gi|224501502|ref|ZP_03669809.1| GTPase EngB [Listeria monocytogenes FSL R2-561] gi|254828207|ref|ZP_05232894.1| GTPase EngB [Listeria monocytogenes FSL N3-165] gi|254831959|ref|ZP_05236614.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes 10403S] gi|284801949|ref|YP_003413814.1| GTPase EngB [Listeria monocytogenes 08-5578] gi|284995091|ref|YP_003416859.1| GTPase EngB [Listeria monocytogenes 08-5923] gi|24418381|sp|Q8Y6X3|ENGB_LISMO RecName: Full=Probable GTP-binding protein EngB gi|16410987|emb|CAC99636.1| lmo1558 [Listeria monocytogenes EGD-e] gi|258600596|gb|EEW13921.1| GTPase EngB [Listeria monocytogenes FSL N3-165] gi|284057511|gb|ADB68452.1| GTPase EngB [Listeria monocytogenes 08-5578] gi|284060558|gb|ADB71497.1| GTPase EngB [Listeria monocytogenes 08-5923] Length = 194 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 9/144 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ ++ Sbjct: 19 PETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH + D+ ++ F Sbjct: 70 ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKPTEDDRMMYEF 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 L + ++ TK DK+ + Q Sbjct: 130 LKYYDIPVIVIATKADKIPRSKWQ 153 >gi|223984579|ref|ZP_03634706.1| hypothetical protein HOLDEFILI_02002 [Holdemania filiformis DSM 12042] gi|223963426|gb|EEF67811.1| hypothetical protein HOLDEFILI_02002 [Holdemania filiformis DSM 12042] Length = 200 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 102/187 (54%), Gaps = 12/187 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ PEI +GRSNVGKSSLIN L RK LA N PG+T+ LNFF D + Sbjct: 19 PESELPEIVLAGRSNVGKSSLINTLCGRKALAYVGNTPGKTRLLNFF---DIDH------ 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYG+A A K+ + +G ++ Y S RS L+ + LL+D RH + D + + Sbjct: 70 RFMFVDVPGYGFANASKQMLIQFGEMMEDYFSSRSQLKGLILLVDMRHAPTEDDITMADY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + + TK+DK+ P + Q ++ + + A +IP SS+ ++G E L + Sbjct: 130 ARYYEIPFVVAATKLDKV-PRSQQS--KQINVIAKALACAPEAIIPFSSITKQGREELLE 186 Query: 205 AILETIN 211 AI N Sbjct: 187 AIDALFN 193 >gi|317131447|ref|YP_004090761.1| ribosome biogenesis GTP-binding protein YsxC [Ethanoligenens harbinense YUAN-3] gi|315469426|gb|ADU26030.1| ribosome biogenesis GTP-binding protein YsxC [Ethanoligenens harbinense YUAN-3] Length = 200 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 65/168 (38%), Positives = 93/168 (55%), Gaps = 21/168 (12%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 ++ HT F SA+ LP PEI FSGRSNVGKSS++N L N+KNLAR S+ Sbjct: 5 LLVHTRFELSAY-------RAQDLPPCTVPEIVFSGRSNVGKSSMLNKLANQKNLARVSS 57 Query: 61 APGRTQHLNFF---VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 PG+T +NF+ P DF LVD+PGYGYA+A + W L+ YL Sbjct: 58 VPGKTVSVNFYRCDRPGDFR----------LVDLPGYGYAKAARAEKIKWSSLVESYLVG 107 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 R + V L+D R + D D+ + ++++ + + +TK+DKL+ T Sbjct: 108 RPAVLAVQ-LVDSRRSLTADDADMLRYFREQSIPFVVTMTKMDKLNVT 154 >gi|218894595|ref|YP_002443465.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas aeruginosa LESB58] gi|226741187|sp|B7V729|ENGB_PSEA8 RecName: Full=Probable GTP-binding protein EngB gi|218774824|emb|CAW30642.1| putative GTP-binding protein [Pseudomonas aeruginosa LESB58] Length = 215 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 99/187 (52%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P E+AF+GRSN GKSS +N L + NLARTS PGRTQ LNFF Sbjct: 16 FLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNFFAL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA+ P W + YLS R++L V+L++D RH Sbjct: 75 DD---------SRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + + + +++TK DKL+ A+ L K + ++ + S+ Sbjct: 126 LTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQLFSA 185 Query: 194 VKRKGIE 200 KR+GI+ Sbjct: 186 PKRQGID 192 >gi|118444919|ref|YP_878859.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium novyi NT] gi|166225951|sp|A0Q2K7|ENGB_CLONN RecName: Full=Probable GTP-binding protein EngB gi|118135375|gb|ABK62419.1| GTP-binding protein [Clostridium novyi NT] Length = 200 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 67/184 (36%), Positives = 99/184 (53%), Gaps = 19/184 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF GRSN GKSSLIN++ NR+ LA+TS+ PG+T+ +NFF L NN VD Sbjct: 25 EMAFVGRSNAGKSSLINVITNRRKLAKTSSTPGKTRQINFF-------LINN--EFYFVD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYG+A+ K WG ++ +YL R L+ + LL+D RH + D ++ ++ Sbjct: 76 LPGYGFAKVSKSEQQKWGSMMEQYLINRHQLKKIVLLVDSRHKPSKEDVQMYEWIKYYGY 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKG----IEVLRK 204 IV TK DKL Q K + +I+ E + SS+ + G +E+L + Sbjct: 136 ETIIVATKSDKLRKNDFQ----KNRKIIKETLNIRDEDKFMFFSSLNKSGKEELLEILSE 191 Query: 205 AILE 208 I E Sbjct: 192 GIFE 195 >gi|255946970|ref|XP_002564252.1| Pc22g02080 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591269|emb|CAP97496.1| Pc22g02080 [Penicillium chrysogenum Wisconsin 54-1255] Length = 312 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 79/133 (59%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ +N F K + L+ Sbjct: 90 PEVAFLGRSNVGKSSLLNAIMG-KEICWTSSKPGRTREMNAF---GIGGTKGGESKVVLL 145 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG K + WG I++YL R LR +LLID HG+KQ D ++ A Sbjct: 146 DMPGYG-----KASRSEWGEEIMKYLQGRKQLRRAFLLIDSTHGIKQTDAEILRLFRHHA 200 Query: 150 VSYQIVLTKIDKL 162 + +QI+L+K+DK Sbjct: 201 IPHQIILSKVDKF 213 >gi|312220493|emb|CBY00434.1| hypothetical protein [Leptosphaeria maculans] Length = 455 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 63/170 (37%), Positives = 101/170 (59%), Gaps = 19/170 (11%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVN---RKNLARTSNAPGRTQHLNF 70 LR V + + P++ PE+AF GRSNVGKSSL+N +V + LARTS+ PG T+ +N Sbjct: 205 LLRSVAQFRMFPESDVPEVAFVGRSNVGKSSLLNAVVGADVKSLLARTSSTPGFTKTMNL 264 Query: 71 F--------VPKDFSNLKNNL---PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 + V K + ++ + + +VDMPGYG ++ SWG I++Y+ R Sbjct: 265 YGVGSGNGIVLKKQPDGRDKIIGRSGLVIVDMPGYGEG-----SLSSWGVEIMKYIQSRK 319 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 LR V++L+D +HG+K D+ + + L VS+Q++L+K+DK+ A+E Sbjct: 320 QLRRVFVLLDAQHGIKDKDRSLLATLRLTGVSHQVILSKLDKIYIPKAKE 369 >gi|327308850|ref|XP_003239116.1| hypothetical protein TERG_01099 [Trichophyton rubrum CBS 118892] gi|326459372|gb|EGD84825.1| hypothetical protein TERG_01099 [Trichophyton rubrum CBS 118892] Length = 320 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 58/139 (41%), Positives = 87/139 (62%), Gaps = 9/139 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P++ PE+ F GRSNVGKSS+IN+LV +++ TS PGRTQ +N F K Sbjct: 102 IPESDIPEVVFMGRSNVGKSSVINMLVG-EDICYTSATPGRTQTMNAF---GIGGTKGGE 157 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + ++D PGYG A P+ WG +++YLS+R LR V+L+I+C+ GVK D++V S Sbjct: 158 TKINIIDSPGYGKASRPE-----WGHELMKYLSKRQQLRRVFLIIECKAGVKNSDKEVLS 212 Query: 144 FLDKKAVSYQIVLTKIDKL 162 L + V +QI+++K D Sbjct: 213 ILREFTVPHQIIVSKADNF 231 >gi|15606865|ref|NP_214245.1| hypothetical protein aq_1815 [Aquifex aeolicus VF5] gi|6226469|sp|O67679|ENGB_AQUAE RecName: Full=Probable GTP-binding protein EngB gi|2984110|gb|AAC07648.1| hypothetical protein aq_1815 [Aquifex aeolicus VF5] Length = 183 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 92/147 (62%), Gaps = 11/147 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ F GRSNVGKSSL+N++V K +A+ S PGRT+ +N+F+ L L LV Sbjct: 19 PEVVFVGRSNVGKSSLLNMVVGSK-VAKVSKTPGRTRAVNYFL------LDKKL---YLV 68 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D+PGYGYA+ ++ ++ W ++ RY ER ++ +LLID GV+ +D+ + + + Sbjct: 69 DVPGYGYAKVGREEMEKWRKMMERYFKERKDNIKMAFLLIDAVAGVQPLDEQMIEWFEYY 128 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTK 175 + + +V+TKIDK S + +TL++ K Sbjct: 129 GIPFTVVITKIDKASQSEIAKTLKQVK 155 >gi|67538696|ref|XP_663122.1| hypothetical protein AN5518.2 [Aspergillus nidulans FGSC A4] gi|40743488|gb|EAA62678.1| hypothetical protein AN5518.2 [Aspergillus nidulans FGSC A4] gi|259485030|tpe|CBF81754.1| TPA: GTP binding protein (EngB), putative (AFU_orthologue; AFUA_6G13010) [Aspergillus nidulans FGSC A4] Length = 332 Score = 110 bits (276), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 80/133 (60%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ +N F K + L+ Sbjct: 103 PEVAFLGRSNVGKSSLLNAVMG-KEMCWTSSKPGRTREMNAF---GIGGTKGGESKIVLL 158 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG K + WG I++YL R LR +LLID HG+K D + S + A Sbjct: 159 DMPGYG-----KASRTEWGVEIMKYLQGRKQLRRAFLLIDSEHGIKPTDAAILSLFRQYA 213 Query: 150 VSYQIVLTKIDKL 162 + +QI+L+K+DKL Sbjct: 214 IPHQIILSKVDKL 226 >gi|224095021|ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|222853234|gb|EEE90781.1| predicted protein [Populus trichocarpa] Length = 302 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 97/191 (50%), Gaps = 12/191 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE A GRSNVGKSSLIN+L +K +A TS PG+TQ +N F+ Sbjct: 118 PRDDRPEFAILGRSNVGKSSLINVLARKKEVALTSKKPGKTQLINHFLVNK--------- 168 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYG+A+AP W Y R TL V LLID ++ID D ++ Sbjct: 169 SWYLVDLPGYGFAKAPDSARMDWSSFTKGYFLNRETLVAVLLLIDASVPPQKIDLDCANW 228 Query: 145 LDKKAVSYQIVLTKIDKLSP---TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L + + +V TK DK+ T E ++ + L+R HP I TSSV G + Sbjct: 229 LGRNNIPMTLVFTKCDKMKGGKRTRPDENIKNFQELMRQNYREHPAWIMTSSVTGLGRDE 288 Query: 202 LRKAILETINY 212 L + + NY Sbjct: 289 LLLHMSQLRNY 299 >gi|221485521|gb|EEE23802.1| GTP-binding protein, putative [Toxoplasma gondii GT1] Length = 499 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 25/193 (12%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP P++A G SNVGKSSL+N L++ +++AR+ + PGRT+HL F +L N+L Sbjct: 292 LPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSKPGRTRHLFTF------DLGNHL 345 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +LVD+PGYG+AR + + W LI Y + LR V L+D GV+ +D+ ++ Sbjct: 346 ---SLVDLPGYGFARVKPQLKEEWAILIEEYFTRSKQLRRVLSLVDATKGVEALDERLWQ 402 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQ----------ETLEKTKYLIRNYPTAHPEVIPTSS 193 L +K + +Q+VLTK D L+ +T+EK + L+ HP V SS Sbjct: 403 LLAEKNLPFQVVLTKADLLTARELHAAMFDVLSRLQTVEKKETLL------HPFVHAVSS 456 Query: 194 VKRKGIEVLRKAI 206 GI LR ++ Sbjct: 457 RHNHGIPELRASL 469 >gi|93005116|ref|YP_579553.1| GTPase EngB [Psychrobacter cryohalolentis K5] gi|92392794|gb|ABE74069.1| cell division checkpoint GTPase YihA [Psychrobacter cryohalolentis K5] Length = 256 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 9/189 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P L P E+AF+GRSN GKSS IN L N++ LAR+S PGRTQ +NFF Sbjct: 28 FMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQMINFFNV 87 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P + W + YL RS+L + L+ D RH Sbjct: 88 GDADR--------RLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMSDIRHP 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + I+LTK DKL ++ L T+ ++ + + S+ Sbjct: 140 LKFFDEQMLRWAKDGELPVHILLTKADKLKYGASKNALLNTRKRLKELGL-NCSIQLFSA 198 Query: 194 VKRKGIEVL 202 ++++G++ L Sbjct: 199 LRKEGLDEL 207 >gi|94986513|ref|YP_594446.1| ribosome biogenesis GTP-binding protein YsxC [Lawsonia intracellularis PHE/MN1-00] gi|119369210|sp|Q1MSA1|ENGB_LAWIP RecName: Full=Probable GTP-binding protein EngB gi|94730762|emb|CAJ54124.1| predicted GTPase [Lawsonia intracellularis PHE/MN1-00] Length = 202 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 98/183 (53%), Gaps = 17/183 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--PKDFSNLKNNLPAMAL 88 +IA +GRSNVGKSSLIN L RK LA+TS PG+T+ +NF+ P F L Sbjct: 33 QIALAGRSNVGKSSLINALAGRKQLAKTSGTPGKTRSINFYAVYPNTF----------ML 82 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYA+ K W LI YL S L+ LLIDCR +++D ++ F Sbjct: 83 VDLPGYGYAQCSKIERQHWAMLIEYYLKNCSKLKAFVLLIDCRIPPQKLDYELAEFATSY 142 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + VLTKIDK + ++ + L+ N P ++ SS KG++ L + I Sbjct: 143 CIPLIPVLTKIDKCKLVEQNKRQKEWRALLNN---TQPLLV--SSKNMKGVQQLWERIQY 197 Query: 209 TIN 211 TI+ Sbjct: 198 TID 200 >gi|237844091|ref|XP_002371343.1| GTP-binding protein, putative [Toxoplasma gondii ME49] gi|211969007|gb|EEB04203.1| GTP-binding protein, putative [Toxoplasma gondii ME49] Length = 428 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 13/187 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP P++A G SNVGKSSL+N L++ +++AR+ + PGRT+HL F +L N+L Sbjct: 221 LPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSKPGRTRHLFTF------DLGNHL 274 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +LVD+PGYG+AR + + W LI Y + LR V L+D GV+ +D+ ++ Sbjct: 275 ---SLVDLPGYGFARVKPQLKEEWAILIEEYFTRSKQLRRVLSLVDATKGVEALDERLWQ 331 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQ----ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L +K + +Q+VLTK D L+ + L + + + + HP V SS GI Sbjct: 332 LLAEKNLPFQVVLTKADLLTARELHAAMFDVLSRLQAVEKKETLLHPFVHAVSSRHNHGI 391 Query: 200 EVLRKAI 206 LR ++ Sbjct: 392 PELRASL 398 >gi|296112713|ref|YP_003626651.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis RH4] gi|295920407|gb|ADG60758.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis RH4] gi|326563796|gb|EGE14047.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 46P47B1] gi|326563958|gb|EGE14208.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 12P80B1] gi|326566809|gb|EGE16948.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 103P14B1] gi|326569867|gb|EGE19917.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC8] gi|326571527|gb|EGE21542.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC7] gi|326575192|gb|EGE25120.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis CO72] gi|326576722|gb|EGE26629.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 101P30B1] gi|326577603|gb|EGE27480.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis O35E] Length = 224 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 8/162 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P L P+ E+AF+GRSN GKSS IN + ++K LAR+S PGRTQ +NFF+ Sbjct: 15 FLLSAPTFKLCPEDTGFEVAFAGRSNAGKSSAINTITHQKQLARSSKTPGRTQMINFFMV 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYGYA P+ W + YL R +L + L+ D RH Sbjct: 75 GD--------EQARIVDLPGYGYAAVPESMKIKWQKELEDYLVSRQSLAGLVLMTDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +K D+ + + + ++LTK DKL + L TK Sbjct: 127 LKYFDEQMLHWAKDGKLPVHVLLTKSDKLKRGAQKSALLATK 168 >gi|242309665|ref|ZP_04808820.1| GTP-binding protein [Helicobacter pullorum MIT 98-5489] gi|239523666|gb|EEQ63532.1| GTP-binding protein [Helicobacter pullorum MIT 98-5489] Length = 206 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 95/181 (52%), Gaps = 10/181 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 FT S F + P EIAF GRSNVGKS+ IN+L N+KNLA++S PG+TQ Sbjct: 4 FTLSKASFFVSAQNLSQCPPPLLSEIAFLGRSNVGKSTFINLLCNQKNLAKSSQTPGKTQ 63 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NFF+ + LVD+PG+GYA+ K W +V +L +R +R Sbjct: 64 LINFFITHWKQKSTQETSQIYLVDLPGFGYAKVSKTQKKLWDKNLVEFLQKRDNIRLFVH 123 Query: 127 LIDCRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 L+D RH Q D+++ F+ +K + TK DKL+ + E+TK L + +P Sbjct: 124 LVDSRHPHLQTDKNLIDFIHQFLRKDQRLLRIFTKFDKLNAS------EQTK-LKKEFPK 176 Query: 184 A 184 A Sbjct: 177 A 177 >gi|326560968|gb|EGE11333.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 7169] gi|326567351|gb|EGE17466.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC1] Length = 224 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 85/162 (52%), Gaps = 8/162 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P L P+ E+AF+GRSN GKSS IN + ++K LAR+S PGRTQ +NFF+ Sbjct: 15 FLLSAPTFKLCPEDTGFEVAFAGRSNAGKSSAINTITHQKQLARSSKTPGRTQMINFFMV 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYGYA P+ W + YL R +L + L+ D RH Sbjct: 75 GD--------EQARIVDLPGYGYAAVPESMKIKWQKELEDYLVSRQSLAGLVLMTDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +K D+ + + + ++LTK DKL + L TK Sbjct: 127 LKYFDEQMLHWAKDGKLPVHVLLTKSDKLKRGAQKSALLATK 168 >gi|221506372|gb|EEE32007.1| GTP-binding protein, putative [Toxoplasma gondii VEG] Length = 428 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 13/187 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP P++A G SNVGKSSL+N L++ +++AR+ + PGRT+HL F +L N+L Sbjct: 221 LPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSKPGRTRHLFTF------DLGNHL 274 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +LVD+PGYG+AR + + W LI Y + LR V L+D GV+ +D+ ++ Sbjct: 275 ---SLVDLPGYGFARVKPQLKEEWAILIEEYFTRSKQLRRVLSLVDATKGVEALDERLWQ 331 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQ----ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L +K + +Q+VLTK D L+ + L + + + + HP V SS GI Sbjct: 332 LLAEKNLPFQVVLTKADLLTARELHAAMFDVLSRLQAVEKKETLLHPFVHAVSSRHNHGI 391 Query: 200 EVLRKAI 206 LR ++ Sbjct: 392 PELRASL 398 >gi|146324516|ref|XP_751180.2| GTP binding protein (EngB) [Aspergillus fumigatus Af293] gi|129557285|gb|EAL89142.2| GTP binding protein (EngB), putative [Aspergillus fumigatus Af293] Length = 321 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ +N F K + L+ Sbjct: 97 PEVAFLGRSNVGKSSLLNAIMG-KEMCWTSSKPGRTREMNAF---GIGGTKGGESKIVLL 152 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG K + WG I++YL R LR ++LID HG+K+ D+D+ K A Sbjct: 153 DMPGYG-----KGSRTEWGIEILKYLQGRRQLRRAFILIDSLHGIKKTDEDILMLFRKYA 207 Query: 150 VSYQIVLTKIDKL 162 + +QI+L+K+DK+ Sbjct: 208 IPHQIILSKVDKV 220 >gi|326391011|ref|ZP_08212560.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter ethanolicus JW 200] gi|325992956|gb|EGD51399.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter ethanolicus JW 200] Length = 194 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/175 (37%), Positives = 99/175 (56%), Gaps = 12/175 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK P+I GRSNVGKS+LIN ++NRKNLA+TS+ PG+T+ +NF+ L NN Sbjct: 19 PKDNFPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRGINFY-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K+ W I +L+ LR LLID R + D + ++ Sbjct: 70 GFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSKNLRHALLLIDIRRTPTEDDFLMVNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 K + + +VLTK DK++ + E + + + + + +I SS+K+ G+ Sbjct: 130 FRHKELPFTVVLTKADKVNKS---EIVNAVEGICKTFNIDSERIIVFSSLKKMGV 181 >gi|241896577|ref|ZP_04783873.1| GTPase [Weissella paramesenteroides ATCC 33313] gi|241870169|gb|EER73920.1| GTPase [Weissella paramesenteroides ATCC 33313] Length = 208 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/141 (43%), Positives = 89/141 (63%), Gaps = 11/141 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE+AF GRSNVGKSSL N+L+NRK+ ARTS+ PG+TQ LNF+ ++N + Sbjct: 19 PTDGLPEVAFVGRSNVGKSSLTNVLINRKSFARTSSQPGKTQTLNFY------KVENQV- 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYGYA+ KK + + +I YL +R L+ + L+D RH + D +++++ Sbjct: 72 --FFVDVPGYGYAKVSKKAREDFAIMIGEYLRKRVPLKGIVQLVDARHLPSREDIEMYNW 129 Query: 145 L--DKKAVSYQIVLTKIDKLS 163 L D + +V TK DK+S Sbjct: 130 LISDDIGLPVLVVATKADKIS 150 >gi|229816689|ref|ZP_04446977.1| hypothetical protein COLINT_03737 [Collinsella intestinalis DSM 13280] gi|229807741|gb|EEP43555.1| hypothetical protein COLINT_03737 [Collinsella intestinalis DSM 13280] Length = 207 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 13/185 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P + PE++F GRSNVGKSS++N L NR+ L + S+ PG+T ++NFF Sbjct: 22 IPPSTCPEVSFVGRSNVGKSSIMNKLFNRRGLVKVSSTPGKTANVNFF----------EA 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYG+A+ K D W LI + + V L+D RH ++D + Sbjct: 72 DGVHFVDLPGYGFAQRSKAERDRWARLIGDFFDSERSFNLVVSLVDIRHDPSKLDLQMIE 131 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 FL + ++ + LTK DKLS + + ++ + + +I TSS GI+ L+ Sbjct: 132 FLRENGFNFIVCLTKADKLSKS---QQGKQAASIRKQIGVPADRLIVTSSESGLGIDRLK 188 Query: 204 KAILE 208 +AI++ Sbjct: 189 QAIVD 193 >gi|159130365|gb|EDP55478.1| GTP binding protein (EngB), putative [Aspergillus fumigatus A1163] Length = 321 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ +N F K + L+ Sbjct: 97 PEVAFLGRSNVGKSSLLNAIMG-KEMCWTSSKPGRTREMNAF---GIGGTKGGESKIVLL 152 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG K + WG I++YL R LR ++LID HG+K+ D+D+ K A Sbjct: 153 DMPGYG-----KGSRTEWGIEILKYLQGRRQLRRAFILIDSLHGIKKTDEDILMLFRKYA 207 Query: 150 VSYQIVLTKIDKL 162 + +QI+L+K+DK+ Sbjct: 208 IPHQIILSKVDKV 220 >gi|311745594|ref|ZP_07719379.1| ribosome biogenesis GTP-binding protein YsxC [Algoriphagus sp. PR1] gi|126578156|gb|EAZ82376.1| ribosome biogenesis GTP-binding protein YsxC [Algoriphagus sp. PR1] Length = 203 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 101/190 (53%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G PK EIAF GRSNVGKSSLIN+L + LA+TS PG+TQ +N F+ + Sbjct: 15 GNCPKPDRAEIAFIGRSNVGKSSLINMLTGKSGLAKTSQKPGKTQLINHFMINE------ 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYG+A+ K W +I YL++R L V++LID R ++ID + Sbjct: 69 ---KWYLVDLPGYGFAKINVKVKQGWESMISTYLTKRENLCGVFVLIDSRLEPQKIDLEF 125 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + V +V TK DK S + ++K K ++ + A P+ TS+ +G E Sbjct: 126 LYWCGTEGVPAVLVFTKADKQSKNKTNQNIQKFLKKMVDIFEEA-PQYFVTSAESAQGKE 184 Query: 201 VLRKAILETI 210 L I E + Sbjct: 185 ELTSFIEELV 194 >gi|292670223|ref|ZP_06603649.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas noxia ATCC 43541] gi|292648175|gb|EFF66147.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas noxia ATCC 43541] Length = 202 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 106/188 (56%), Gaps = 7/188 (3%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G P +AF GRSNVGKSSLIN L + LAR S+ PG+TQ +NF+ + Sbjct: 18 PEEGRPAVAFIGRSNVGKSSLINSLTRIRQLARVSSKPGKTQTINFYELLLRIDGGAERY 77 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 ++ LVD+PGYGYA+A + + W I YL + LR V LL+D RH + D+ +FS+ Sbjct: 78 SVHLVDLPGYGYAKAARDSRKVWAKFIEEYLLYAAELRFVCLLLDIRHTPMESDRRMFSW 137 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IE 200 L + + ++ TK DK+ + + + + R+ V+P +S K +G ++ Sbjct: 138 LVEHNIPVLVIATKSDKIGRNARRARIAEIQ---RSLGVPELTVLPYASPKNEGRSELLD 194 Query: 201 VLRKAILE 208 V+++ ++E Sbjct: 195 VMKEYLIE 202 >gi|116053642|ref|YP_793969.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas aeruginosa UCBPP-PA14] gi|296392357|ref|ZP_06881832.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas aeruginosa PAb1] gi|122256338|sp|Q02DL7|ENGB_PSEAB RecName: Full=Probable GTP-binding protein EngB gi|115588863|gb|ABJ14878.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 215 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P E+AF+GRSN GKSS +N L + NLARTS PGRTQ LNFF Sbjct: 16 FLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNFFAL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA+ P W + YLS R++L V+L++D RH Sbjct: 75 DD---------SRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + + + +++TK DKL+ A+ L K + ++ + S+ Sbjct: 126 LTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQLFSA 185 Query: 194 VKRKGIE 200 KR+G++ Sbjct: 186 PKRQGVD 192 >gi|15600685|ref|NP_254179.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas aeruginosa PAO1] gi|107104594|ref|ZP_01368512.1| hypothetical protein PaerPA_01005673 [Pseudomonas aeruginosa PACS2] gi|254243044|ref|ZP_04936366.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|313111567|ref|ZP_07797366.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016] gi|13124210|sp|Q9HT81|ENGB_PSEAE RecName: Full=Probable GTP-binding protein EngB gi|9951827|gb|AAG08877.1|AE004962_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126196422|gb|EAZ60485.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|310883868|gb|EFQ42462.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016] Length = 215 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P E+AF+GRSN GKSS +N L + NLARTS PGRTQ LNFF Sbjct: 16 FLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNFFAL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA+ P W + YLS R++L V+L++D RH Sbjct: 75 DD---------SRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + + + +++TK DKL+ A+ L K + ++ + S+ Sbjct: 126 LTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQLFSA 185 Query: 194 VKRKGIE 200 KR+G++ Sbjct: 186 PKRQGVD 192 >gi|309776473|ref|ZP_07671459.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelotrichaceae bacterium 3_1_53] gi|308915864|gb|EFP61618.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelotrichaceae bacterium 3_1_53] Length = 196 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 95/183 (51%), Gaps = 13/183 (7%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P+ P PEI +GRSNVGKSS IN + RK LA N PG+T+ LNFF N Sbjct: 14 PDKKSWPDTTLPEIVLAGRSNVGKSSFINAMCGRKKLAYVGNTPGKTRLLNFF------N 67 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 L + VD+PGYGYA K + +G ++ Y SER+ + V +L+D RH D Sbjct: 68 LDDKY---MFVDVPGYGYANISKTQLIKFGQMMEDYFSERTQKKGVVILVDARHKPTDDD 124 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + F + +V TK DK+ PT A + K L+ N A + P S+V+++ Sbjct: 125 MTMLEFARYYEIPVAVVATKCDKVPPTKRAHHFAQIRKTLMLN---ADEPLFPFSAVEKQ 181 Query: 198 GIE 200 G+E Sbjct: 182 GME 184 >gi|221201596|ref|ZP_03574634.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD2M] gi|221207329|ref|ZP_03580339.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD2] gi|221172917|gb|EEE05354.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD2] gi|221178412|gb|EEE10821.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD2M] Length = 219 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/158 (37%), Positives = 85/158 (53%), Gaps = 5/158 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 20 LPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + ++D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSTYLATRSQLCGLILMMDSRRPLTELDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +LTK DKL+ + L T+ + Y Sbjct: 135 WFAPTGKPIHTLLTKCDKLTRQESINALRTTQKGLDAY 172 >gi|148244359|ref|YP_001219053.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Vesicomyosocius okutanii HA] gi|166232161|sp|A5CXJ4|ENGB_VESOH RecName: Full=Probable GTP-binding protein EngB gi|146326186|dbj|BAF61329.1| GTP-binding protein [Candidatus Vesicomyosocius okutanii HA] Length = 199 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 99/190 (52%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 FL P + P E+ F+GRSN GKS IN L + LA+ S PGRTQHL FF + Sbjct: 10 FLLSCPSLKGCPPDQGYEVIFAGRSNAGKSRAINTLTLQNKLAKVSRTPGRTQHLVFFEL 69 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 KD L D+PGYGYA+ P+ W + Y ++R LR L++D RH Sbjct: 70 DKD----------RRLADLPGYGYAKVPEHIKVKWYKDMNEYFNQRDCLRGAVLVMDVRH 119 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +K DQ + + + + QI+LTK DKL A T K I+ Y ++ +V S Sbjct: 120 PLKPFDQMMLDWCNNIHLPTQIILTKSDKLKKIAASNTYFKVLDQIKKY--SYVDVQLFS 177 Query: 193 SVKRKGIEVL 202 S+K++G++ L Sbjct: 178 SLKKQGLKKL 187 >gi|169606740|ref|XP_001796790.1| hypothetical protein SNOG_06418 [Phaeosphaeria nodorum SN15] gi|160707069|gb|EAT86249.2| hypothetical protein SNOG_06418 [Phaeosphaeria nodorum SN15] Length = 1169 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 98/162 (60%), Gaps = 18/162 (11%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVN---RKNLARTSNAPGRTQHLNF 70 LR + +P++ PE+AF GRSNVGKSSL+N +V+ + LARTS G T+ +NF Sbjct: 49 LLRSIANFREVPESDVPEVAFVGRSNVGKSSLLNAIVDANVKDLLARTSATRGFTKTMNF 108 Query: 71 FV--PKDFSNLKNNL--------PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 + P+ +LK + P + +VDMPGYG + ++ SWG I++Y+ R Sbjct: 109 YGIGPETGVSLKKDKNGRDKIAGPGLVIVDMPGYG-----EGSLASWGIEIMKYIQSRKQ 163 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 LR V++L+D HG+K D+ + + L VS+Q++L+K+DKL Sbjct: 164 LRRVFVLLDAEHGIKDKDRSLLASLRLAGVSHQVILSKLDKL 205 >gi|107024272|ref|YP_622599.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia cenocepacia AU 1054] gi|116688403|ref|YP_834026.1| GTPase EngB [Burkholderia cenocepacia HI2424] gi|170731713|ref|YP_001763660.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia cenocepacia MC0-3] gi|206558672|ref|YP_002229432.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia cenocepacia J2315] gi|254246572|ref|ZP_04939893.1| GTP-binding protein, HSR1-related [Burkholderia cenocepacia PC184] gi|119368795|sp|Q1BRX9|ENGB_BURCA RecName: Full=Probable GTP-binding protein EngB gi|166225945|sp|A0K3Q6|ENGB_BURCH RecName: Full=Probable GTP-binding protein EngB gi|238688582|sp|B1JU53|ENGB_BURCC RecName: Full=Probable GTP-binding protein EngB gi|238693064|sp|B4E5Y9|ENGB_BURCJ RecName: Full=Probable GTP-binding protein EngB gi|105894461|gb|ABF77626.1| cell division checkpoint GTPase YihA [Burkholderia cenocepacia AU 1054] gi|116646492|gb|ABK07133.1| cell division checkpoint GTPase YihA [Burkholderia cenocepacia HI2424] gi|124871348|gb|EAY63064.1| GTP-binding protein, HSR1-related [Burkholderia cenocepacia PC184] gi|169814955|gb|ACA89538.1| GTP-binding protein HSR1-related [Burkholderia cenocepacia MC0-3] gi|198034709|emb|CAR50576.1| putative GTP-binding cell division protein EngB [Burkholderia cenocepacia J2315] Length = 219 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 5/158 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 20 LPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + +D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +LTK DKL+ + L T+ + Y Sbjct: 135 WFAPTGKPIHTLLTKCDKLTRQESINALRNTQKGLDAY 172 >gi|255551060|ref|XP_002516578.1| GTP-binding protein engB, putative [Ricinus communis] gi|223544398|gb|EEF45919.1| GTP-binding protein engB, putative [Ricinus communis] Length = 317 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 98/193 (50%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 130 PNDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRVND--------- 180 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA AP++ W Y RSTL V+LLID K+ID + S+ Sbjct: 181 SWYLVDLPGYGYAAAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASW 240 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + + ++ TK DK E + + LIR++ P I TSS +G Sbjct: 241 LGQNQIPMTLIFTKCDKRKKKKNGGKRPDENVNDFQELIRSFFKTAPPWIMTSSTTNQGR 300 Query: 200 EVLRKAILETINY 212 + + + + NY Sbjct: 301 DEMLLHMAQLRNY 313 >gi|134294474|ref|YP_001118209.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia vietnamiensis G4] gi|166225947|sp|A4JAS1|ENGB_BURVG RecName: Full=Probable GTP-binding protein EngB gi|134137631|gb|ABO53374.1| cell division checkpoint GTPase YihA [Burkholderia vietnamiensis G4] Length = 219 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 5/158 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 20 LPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + +D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +LTK DKL+ + L T+ + Y Sbjct: 135 WFAPTGKPIHTLLTKCDKLTRQESINALRNTQKGLDAY 172 >gi|227824394|ref|ZP_03989226.1| GTP-binding protein [Acidaminococcus sp. D21] gi|226904893|gb|EEH90811.1| GTP-binding protein [Acidaminococcus sp. D21] Length = 210 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 87/156 (55%), Gaps = 4/156 (2%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF--FVPKDFSNLKNN 82 P+ E+AF GRSNVGKSSL+N L RK LAR S++PG+TQ +NF F K + + Sbjct: 24 PQDTVDEVAFIGRSNVGKSSLLNSLARRKGLARVSSSPGKTQTINFYSFRAKKTTEKEPL 83 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 VD+PGYG+AR + + W I +Y+ L+ V +L+D RH + D D + Sbjct: 84 RHTFYAVDLPGYGFARTSQSQKNQWSAFICKYMENSRDLKLVCILMDIRHAPMESDIDCY 143 Query: 143 SFLDKKAVSYQIVLTKIDKLS--PTTAQETLEKTKY 176 +L + I+LTK DKL+ AQ+ L K + Sbjct: 144 QWLLSLGIPLMIILTKSDKLNKGAVAAQKELYKKTF 179 >gi|49078162|gb|AAT49757.1| PA5492 [synthetic construct] Length = 216 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P E+AF+GRSN GKSS +N L + NLARTS PGRTQ LNFF Sbjct: 16 FLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNFFAL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA+ P W + YLS R++L V+L++D RH Sbjct: 75 DD---------SRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + + + +++TK DKL+ A+ L K + ++ + S+ Sbjct: 126 LTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQLFSA 185 Query: 194 VKRKGIE 200 KR+G++ Sbjct: 186 PKRQGVD 192 >gi|77361668|ref|YP_341243.1| GTPase EngB [Pseudoalteromonas haloplanktis TAC125] gi|119369234|sp|Q3IJG3|ENGB_PSEHT RecName: Full=Probable GTP-binding protein EngB gi|76876579|emb|CAI87801.1| putative GTPase with nucleoside triP hydrolase domain, involved in coordination of cell cycle [Pseudoalteromonas haloplanktis TAC125] Length = 222 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 91/162 (56%), Gaps = 8/162 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDITKLPADTGIEVAFAGRSNAGKSSALNALTDQK-LARTSKTPGRTQLINTFEL 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + M L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADVDD-------MRLIDLPGYGFAKVPIEMKKKWQKSLGEYLQKRQSLKGIVILMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +K +D+D+ ++ + +LTK DK Q + K + Sbjct: 125 LKDLDRDLINWAISSEIPVLALLTKADKFKQGPRQSQVLKVR 166 >gi|54310555|ref|YP_131575.1| ribosome biogenesis GTP-binding protein YsxC [Photobacterium profundum SS9] gi|46914998|emb|CAG21773.1| putative ATP/GTP-binding protein [Photobacterium profundum SS9] Length = 251 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + ++K LARTS PGRTQ +N F Sbjct: 35 FITSAPDIRHLPQDTGVEIAFAGRSNAGKSSALNRITDQKGLARTSKTPGRTQLINMFEV 94 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 95 TQGCN---------LIDLPGYGFAQVPLELKIKWQKALGEYLQKRECLKGLVVLMDIRHP 145 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DK+ + L K + +++ ++ SS Sbjct: 146 MKDLDQQMIFWAIESRLPVLVLLTKADKMKSGARKAQLLKVRESSKSF-GGDVQIELFSS 204 Query: 194 VKRKGIEVLRKAI 206 +K G++ +R+ + Sbjct: 205 LKGIGLDQVRRKL 217 >gi|254253489|ref|ZP_04946807.1| GTP-binding protein [Burkholderia dolosa AUO158] gi|124896098|gb|EAY69978.1| GTP-binding protein [Burkholderia dolosa AUO158] Length = 219 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 5/158 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 20 LPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + +D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +LTK DKL+ + L T+ + Y Sbjct: 135 WFAPTGKPIHTLLTKCDKLTRQESINALRTTQKGLDAY 172 >gi|218781246|ref|YP_002432564.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01] gi|226741189|sp|B8FLF0|ENGB_DESAA RecName: Full=Probable GTP-binding protein EngB gi|218762630|gb|ACL05096.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01] Length = 205 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/150 (40%), Positives = 86/150 (57%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + G P PEIAF+GRSNVGKSSLIN L+ RK L +TS+ PGRTQ LNFF Sbjct: 8 FMSSATKPGNYPPPELPEIAFAGRSNVGKSSLINSLLKRKKLVKTSSTPGRTQLLNFFEV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + ++ VD+PGYGYA+ K+ WG +I +++ R TL V L++D R Sbjct: 68 NE---------SLVFVDLPGYGYAKVSKEMRKKWGQMIETFITTRKTLHGVVLILDLRRI 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +++ ++ D + +V TK DK S Sbjct: 119 PGGQERENLAWFDLNNIPVILVATKADKFS 148 >gi|218885478|ref|YP_002434799.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756432|gb|ACL07331.1| small GTP-binding protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 254 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/136 (44%), Positives = 82/136 (60%), Gaps = 12/136 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMA 87 P+IA +GRSNVGKSSL+N L RK LA+ S PG+T+ +N++ P F Sbjct: 23 PQIALAGRSNVGKSSLVNALARRKALAKISATPGKTRSINYYRVKPDGFY---------- 72 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD+PGYGYA+ K+ W LI RYLS TL+ + +L+D R +Q+D D+ SF K Sbjct: 73 VVDLPGYGYAKCSKEERQKWAELIERYLSTCPTLKALTVLLDSRLEPQQLDLDLTSFARK 132 Query: 148 KAVSYQIVLTKIDKLS 163 ++ VLTK DK S Sbjct: 133 NGITLLPVLTKADKCS 148 >gi|189502027|ref|YP_001957744.1| hypothetical protein Aasi_0617 [Candidatus Amoebophilus asiaticus 5a2] gi|238692308|sp|B3ES13|ENGB_AMOA5 RecName: Full=Probable GTP-binding protein EngB gi|189497468|gb|ACE06015.1| hypothetical protein Aasi_0617 [Candidatus Amoebophilus asiaticus 5a2] Length = 210 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 99/191 (51%), Gaps = 10/191 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 IF+ P A EIAF GRSNVGKSSL+N+++ +K LA+TS PG+TQ +N F+ Sbjct: 7 IFVTSSATYKKCPPADKAEIAFIGRSNVGKSSLVNMILGQKKLAKTSARPGKTQLINHFL 66 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 LVD+PGYG+A+A K W ++ +YL R L C+++L+D R Sbjct: 67 VNQ---------KYYLVDLPGYGWAQASKTQRIGWNKMVNQYLLYRENLACLFVLLDIRL 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++ID +FL + + IVLTK DK+S L K + + TS Sbjct: 118 PPQKIDLLFINFLIDNDIPFAIVLTKADKISKQQVVNQLATFKRTLAPSTKESLNYVVTS 177 Query: 193 SVKRKG-IEVL 202 S + G IE L Sbjct: 178 SKNQAGKIEAL 188 >gi|302333339|gb|ADL23532.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus JKD6159] Length = 196 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 21 PETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Q D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHNPTQDDILMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK+ Q+ ++ K Sbjct: 132 LKHFDIPTLVICTKEDKIPKGKVQKHIKNIK 162 >gi|218283666|ref|ZP_03489627.1| hypothetical protein EUBIFOR_02221 [Eubacterium biforme DSM 3989] gi|218215655|gb|EEC89193.1| hypothetical protein EUBIFOR_02221 [Eubacterium biforme DSM 3989] Length = 194 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 95/187 (50%), Gaps = 16/187 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ PE+ GRSNVGKSS IN L N+K LA N PG+T+ +NFF + N Sbjct: 16 PESDLPEVVVVGRSNVGKSSFINALTNKKKLAYVGNTPGKTRLINFF------KIDNTW- 68 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K+ + G ++ Y ++R + CV L+D RHG D D+ Sbjct: 69 --MLVDVPGYGYAKMSKQMLIKMGKMMDTYFNQREQICCVVQLVDARHGATHDDLDMIEM 126 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + IV TK+DK+ T L K + + + SS ++ G E Sbjct: 127 IQSLGIQIVIVATKVDKIPKTKRVRAL---KDISQQLHLPMKNIFGISSTEKTGFE---- 179 Query: 205 AILETIN 211 +LE IN Sbjct: 180 PVLEKIN 186 >gi|167628601|ref|YP_001679100.1| GTP-binding protein [Heliobacterium modesticaldum Ice1] gi|238687891|sp|B0TFJ0|ENGB_HELMI RecName: Full=Probable GTP-binding protein EngB gi|167591341|gb|ABZ83089.1| GTP-binding protein [Heliobacterium modesticaldum Ice1] Length = 205 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/139 (43%), Positives = 82/139 (58%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A GRSNVGKSSLIN L NR++LARTS+ PG+TQ LNF+ Sbjct: 19 PEDNLPEVALVGRSNVGKSSLINKLCNRRHLARTSSTPGKTQTLNFYRINQ--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A +VD+PGYGYA K SWG ++ YL +R LR V L+D RH + D + + Sbjct: 70 AAYIVDLPGYGYASVSKTQRASWGPMMEHYLKKRLQLRGVIQLVDIRHPPTKDDIAMREW 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L+ + ++ TK DK++ Sbjct: 130 LNHFKIGAAVIATKADKIN 148 >gi|238487330|ref|XP_002374903.1| GTP binding protein (EngB), putative [Aspergillus flavus NRRL3357] gi|317143661|ref|XP_001819608.2| GTP-binding protein (EngB) [Aspergillus oryzae RIB40] gi|220699782|gb|EED56121.1| GTP binding protein (EngB), putative [Aspergillus flavus NRRL3357] Length = 318 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 82/133 (61%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ +N F K + L+ Sbjct: 96 PEVAFLGRSNVGKSSLLNAIMG-KEICWTSSKPGRTREMNAF---GIGGTKGGESKIVLL 151 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG K + WG I++YL R LR +LLID HG+K+ D+D+ K A Sbjct: 152 DMPGYG-----KASRTEWGIEIMKYLQGRKQLRRAFLLIDSLHGLKKTDEDILMLFRKYA 206 Query: 150 VSYQIVLTKIDKL 162 + +Q++++K+DK+ Sbjct: 207 IPHQVIMSKVDKI 219 >gi|90414662|ref|ZP_01222633.1| GTP-binding protein [Photobacterium profundum 3TCK] gi|90324204|gb|EAS40779.1| GTP-binding protein [Photobacterium profundum 3TCK] Length = 228 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + ++K LARTS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPQDTGVEIAFAGRSNAGKSSALNRITDQKGLARTSKTPGRTQLINMFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 TQGCN---------LIDLPGYGFAQVPLELKIKWQKALGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DK+ + L K + +++ ++ SS Sbjct: 123 MKDLDQQMIFWAIESRLPVLVLLTKADKMKSGARKAQLLKVRESSKSF-GGDVQIELFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K G++ +R+ + Sbjct: 182 LKGIGLDQVRRKL 194 >gi|15924663|ref|NP_372197.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus Mu50] gi|15927252|ref|NP_374785.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus N315] gi|49486500|ref|YP_043721.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MSSA476] gi|57650545|ref|YP_186558.1| GTPase EngB [Staphylococcus aureus subsp. aureus COL] gi|82751262|ref|YP_417003.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus RF122] gi|87160096|ref|YP_494315.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195478|ref|YP_500282.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268154|ref|YP_001247097.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus JH9] gi|150394221|ref|YP_001316896.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus JH1] gi|151221779|ref|YP_001332601.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus str. Newman] gi|156979991|ref|YP_001442250.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus Mu3] gi|161509892|ref|YP_001575551.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142576|ref|ZP_03567069.1| GTPase EngB [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317183|ref|ZP_04840396.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253734542|ref|ZP_04868707.1| GTPase [Staphylococcus aureus subsp. aureus TCH130] gi|255006458|ref|ZP_05145059.2| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794059|ref|ZP_05643038.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9781] gi|258415763|ref|ZP_05682034.1| GTP-binding protein engB [Staphylococcus aureus A9763] gi|258422000|ref|ZP_05684920.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9719] gi|258424090|ref|ZP_05686972.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9635] gi|258438242|ref|ZP_05689526.1| GTPase EngB [Staphylococcus aureus A9299] gi|258443700|ref|ZP_05692039.1| GTPase EngB [Staphylococcus aureus A8115] gi|258444938|ref|ZP_05693258.1| GTPase EngB [Staphylococcus aureus A6300] gi|258447992|ref|ZP_05696124.1| GTPase EngB [Staphylococcus aureus A6224] gi|258451812|ref|ZP_05699834.1| GTPase EngB [Staphylococcus aureus A5948] gi|258454300|ref|ZP_05702269.1| GTPase EngB [Staphylococcus aureus A5937] gi|262048648|ref|ZP_06021531.1| GTP-binding protein [Staphylococcus aureus D30] gi|269203291|ref|YP_003282560.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ED98] gi|282893169|ref|ZP_06301403.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8117] gi|282916933|ref|ZP_06324691.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus D139] gi|282920214|ref|ZP_06327939.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9765] gi|282929347|ref|ZP_06336914.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A10102] gi|283770738|ref|ZP_06343630.1| GTPase EngB [Staphylococcus aureus subsp. aureus H19] gi|284024722|ref|ZP_06379120.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 132] gi|294848695|ref|ZP_06789441.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9754] gi|295405984|ref|ZP_06815792.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8819] gi|296274899|ref|ZP_06857406.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MR1] gi|297207613|ref|ZP_06924048.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245090|ref|ZP_06928967.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8796] gi|304380735|ref|ZP_07363404.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54037057|sp|P64071|ENGB_STAAN RecName: Full=Probable GTP-binding protein EngB gi|54040980|sp|P64070|ENGB_STAAM RecName: Full=Probable GTP-binding protein EngB gi|56748964|sp|Q6G8Q2|ENGB_STAAS RecName: Full=Probable GTP-binding protein EngB gi|71151868|sp|Q5HF99|ENGB_STAAC RecName: Full=Probable GTP-binding protein EngB gi|119369263|sp|Q2FG63|ENGB_STAA3 RecName: Full=Probable GTP-binding protein EngB gi|119369264|sp|Q2FXQ8|ENGB_STAA8 RecName: Full=Probable GTP-binding protein EngB gi|119369265|sp|Q2YTB6|ENGB_STAAB RecName: Full=Probable GTP-binding protein EngB gi|166225986|sp|A7X395|ENGB_STAA1 RecName: Full=Probable GTP-binding protein EngB gi|172048935|sp|A6QHK7|ENGB_STAAE RecName: Full=Probable GTP-binding protein EngB gi|189037192|sp|A6U2E1|ENGB_STAA2 RecName: Full=Probable GTP-binding protein EngB gi|189037193|sp|A5ITJ8|ENGB_STAA9 RecName: Full=Probable GTP-binding protein EngB gi|189037194|sp|A8Z2J4|ENGB_STAAT RecName: Full=Probable GTP-binding protein EngB gi|13701470|dbj|BAB42764.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14247445|dbj|BAB57835.1| probable GTP-binding protein engB [Staphylococcus aureus subsp. aureus Mu50] gi|49244943|emb|CAG43404.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284731|gb|AAW36825.1| GTP-binding protein, putative [Staphylococcus aureus subsp. aureus COL] gi|82656793|emb|CAI81222.1| probable GTP-binding protein [Staphylococcus aureus RF122] gi|87126070|gb|ABD20584.1| probable GTP-binding protein engB [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203036|gb|ABD30846.1| GTP-binding protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741223|gb|ABQ49521.1| GTP-binding protein, HSR1-related [Staphylococcus aureus subsp. aureus JH9] gi|149946673|gb|ABR52609.1| GTP-binding protein HSR1-related [Staphylococcus aureus subsp. aureus JH1] gi|150374579|dbj|BAF67839.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156722126|dbj|BAF78543.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368701|gb|ABX29672.1| possible GTP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253727483|gb|EES96212.1| GTPase [Staphylococcus aureus subsp. aureus TCH130] gi|257788031|gb|EEV26371.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9781] gi|257839356|gb|EEV63829.1| GTP-binding protein engB [Staphylococcus aureus A9763] gi|257842044|gb|EEV66473.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9719] gi|257845711|gb|EEV69743.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9635] gi|257848286|gb|EEV72277.1| GTPase EngB [Staphylococcus aureus A9299] gi|257851106|gb|EEV75049.1| GTPase EngB [Staphylococcus aureus A8115] gi|257856146|gb|EEV79061.1| GTPase EngB [Staphylococcus aureus A6300] gi|257858753|gb|EEV81624.1| GTPase EngB [Staphylococcus aureus A6224] gi|257860524|gb|EEV83350.1| GTPase EngB [Staphylococcus aureus A5948] gi|257863530|gb|EEV86289.1| GTPase EngB [Staphylococcus aureus A5937] gi|259163295|gb|EEW47854.1| GTP-binding protein [Staphylococcus aureus D30] gi|262075581|gb|ACY11554.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ED98] gi|269941154|emb|CBI49541.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus TW20] gi|282319420|gb|EFB49772.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus D139] gi|282589079|gb|EFB94180.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A10102] gi|282594562|gb|EFB99547.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9765] gi|282764487|gb|EFC04613.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8117] gi|283460885|gb|EFC07975.1| GTPase EngB [Staphylococcus aureus subsp. aureus H19] gi|283470941|emb|CAQ50152.1| probable GTP-binding protein EngB [Staphylococcus aureus subsp. aureus ST398] gi|285817357|gb|ADC37844.1| GTP-binding protein EngB [Staphylococcus aureus 04-02981] gi|294824721|gb|EFG41144.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9754] gi|294968981|gb|EFG45002.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8819] gi|296887630|gb|EFH26528.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178170|gb|EFH37418.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8796] gi|298694944|gb|ADI98166.1| probable GTP-binding protein [Staphylococcus aureus subsp. aureus ED133] gi|302751500|gb|ADL65677.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340734|gb|EFM06665.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830052|emb|CBX34894.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130695|gb|EFT86681.1| GTPase EngB [Staphylococcus aureus subsp. aureus CGS03] gi|315198632|gb|EFU28960.1| GTPase EngB [Staphylococcus aureus subsp. aureus CGS01] gi|320140448|gb|EFW32302.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MRSA131] gi|320143986|gb|EFW35755.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MRSA177] gi|323440782|gb|EGA98491.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus O11] gi|323442937|gb|EGB00560.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus O46] gi|329314347|gb|AEB88760.1| Probable GTP-binding protein engB [Staphylococcus aureus subsp. aureus T0131] gi|329727177|gb|EGG63633.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 21172] gi|329728440|gb|EGG64877.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 21189] gi|329733169|gb|EGG69506.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 21193] Length = 196 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 21 PETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Q D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDPTQDDILMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK+ Q+ ++ K Sbjct: 132 LKHFDIPTLVICTKEDKIPKGKVQKHIKNIK 162 >gi|119369229|sp|Q6LLQ5|ENGB_PHOPR RecName: Full=Probable GTP-binding protein EngB Length = 233 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + ++K LARTS PGRTQ +N F Sbjct: 17 FITSAPDIRHLPQDTGVEIAFAGRSNAGKSSALNRITDQKGLARTSKTPGRTQLINMFEV 76 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 77 TQGCN---------LIDLPGYGFAQVPLELKIKWQKALGEYLQKRECLKGLVVLMDIRHP 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DK+ + L K + +++ ++ SS Sbjct: 128 MKDLDQQMIFWAIESRLPVLVLLTKADKMKSGARKAQLLKVRESSKSF-GGDVQIELFSS 186 Query: 194 VKRKGIEVLRKAI 206 +K G++ +R+ + Sbjct: 187 LKGIGLDQVRRKL 199 >gi|91794968|ref|YP_564619.1| GTPase EngB [Shewanella denitrificans OS217] gi|119369252|sp|Q12I30|ENGB_SHEDO RecName: Full=Probable GTP-binding protein EngB gi|91716970|gb|ABE56896.1| cell division checkpoint GTPase YihA [Shewanella denitrificans OS217] Length = 219 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 101/189 (53%), Gaps = 14/189 (7%) Query: 14 FLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I L + P EIAF+GRSN GKSS +N L +K+LARTS PGRTQ +N Sbjct: 13 FLISAPDIAHLNQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLARTSKTPGRTQLIN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F D L VD+PGYG+A+ P + W + YL +R+ L V +L+D Sbjct: 73 VFALDDDRRL---------VDLPGYGFAQVPLALKNKWQQALGEYLQKRACLSGVVVLMD 123 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +D + + + +LTK DKL+ + +T+ + + + ++ +V Sbjct: 124 IRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRSALADFGD-WVKVE 182 Query: 190 PTSSVKRKG 198 P SS+K G Sbjct: 183 PFSSLKGTG 191 >gi|282890348|ref|ZP_06298876.1| hypothetical protein pah_c016o061 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499730|gb|EFB42021.1| hypothetical protein pah_c016o061 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 205 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 16/183 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIA +GRSNVGKSSL+N L KNL +TS+ PG+TQ LNFF N + V Sbjct: 32 PEIAVAGRSNVGKSSLLNHLFQVKNLVKTSSTPGKTQALNFF---------NVDEKLVFV 82 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ P + WG LI YL ER L+ + L D R + D+ ++ K Sbjct: 83 DLPGYGFAQVPLEVRKKWGPLIEHYLRERENLKLILFLFDIRRLPNEDDKLFLDWVIKNQ 142 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV----IPTSSVKRKGIEVLRKA 205 S +VLTK+DK+ TA + +T+ ++ + + +P + +++ I ++ +A Sbjct: 143 KSMILVLTKVDKV---TANQKASQTRAILSAFEAENIHYAYYSVPKNLGRKELIAMMNEA 199 Query: 206 ILE 208 + E Sbjct: 200 LEE 202 >gi|226942364|ref|YP_002797437.1| ribosome biogenesis GTP-binding protein YsxC [Azotobacter vinelandii DJ] gi|259645889|sp|C1DH55|ENGB_AZOVD RecName: Full=Probable GTP-binding protein EngB gi|226717291|gb|ACO76462.1| GTPase, MMR_HSR1 family [Azotobacter vinelandii DJ] Length = 216 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 93/187 (49%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P E+AF+GRSN GKSS +N L + NLARTS PGRTQ LNFF Sbjct: 16 FMLSAARVDQCPADDGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNFFRL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L V LL+D RH Sbjct: 75 DDRRRL---------VDLPGYGYAKVPIPLKQHWQHHLEAYLGSRRSLAGVVLLMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + + + I+LTK DKL+ A+ L K + I V S+ Sbjct: 126 LTDFDRMMLDWAGASGMPMHILLTKADKLAFGAAKNALLKVRREIHKGWGEGMSVQLFSA 185 Query: 194 VKRKGIE 200 KR+G+E Sbjct: 186 PKRQGVE 192 >gi|167620705|ref|ZP_02389336.1| GTPase EngB [Burkholderia thailandensis Bt4] gi|257137673|ref|ZP_05585935.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia thailandensis E264] gi|119368798|sp|Q2SU58|ENGB_BURTA RecName: Full=Probable GTP-binding protein EngB Length = 219 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 96/191 (50%), Gaps = 9/191 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 10 FFTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL R L + L++D R Sbjct: 70 GPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA----HPEVI 189 + ++D+ + + +LTK DKL+ + L T+ + Y A V Sbjct: 125 LTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGYAGKLTVQ 184 Query: 190 PTSSVKRKGIE 200 S++KR G++ Sbjct: 185 LFSALKRTGLD 195 >gi|311696218|gb|ADP99091.1| GTP-binding protein EngB [marine bacterium HP15] Length = 215 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + P E+AF+GRSN GKSS +N + LARTS PGRT+ +NFF Sbjct: 17 FLISASRLDECPPDFGAEVAFAGRSNAGKSSALNAITANGKLARTSKTPGRTRLINFFSL 76 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N +VD+PGYGYA+ + D W + YL++R LR + L++D RH Sbjct: 77 --------NRENCRMVDLPGYGYAKVSRDMKDDWQKHLGHYLNDRRCLRGLVLVMDIRHP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + DQ + + + + I+ TK DKL A+ + +++Y +I S+ Sbjct: 129 LTDFDQMMVEWCEHNNLPLMILATKADKLKYGQAKTAMLGIAKNLKSYSCVE-HLIMFSA 187 Query: 194 VKRKGIEVLRKAILE 208 ++G++ R+A++E Sbjct: 188 TSKRGVDECREALIE 202 >gi|167582592|ref|ZP_02375466.1| GTPase EngB [Burkholderia thailandensis TXDOH] Length = 219 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 96/191 (50%), Gaps = 9/191 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 10 FFTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL R L + L++D R Sbjct: 70 GPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA----HPEVI 189 + ++D+ + + +LTK DKL+ + L T+ + Y A V Sbjct: 125 LTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGYAGKLTVQ 184 Query: 190 PTSSVKRKGIE 200 S++KR G++ Sbjct: 185 LFSALKRTGLD 195 >gi|261366927|ref|ZP_05979810.1| ribosome biogenesis GTP-binding protein YsxC [Subdoligranulum variabile DSM 15176] gi|282571043|gb|EFB76578.1| ribosome biogenesis GTP-binding protein YsxC [Subdoligranulum variabile DSM 15176] Length = 200 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 93/188 (49%), Gaps = 12/188 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP + PEI FSGRSNVGKSSLIN L NRKNLAR S+ PG+T +NF+ Sbjct: 18 LPDSDRPEIVFSGRSNVGKSSLINKLCNRKNLARVSSTPGKTATINFY----------KA 67 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYGYA+ + W LI Y + + L+DCRH D + Sbjct: 68 DTAYFVDLPGYGYAKVSNADRARWDELINSYFEADRAVCLLIQLLDCRHAPSADDVQMLE 127 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + + LTK DKL + Q ++++ P V TS+ G++ LR Sbjct: 128 YLHYHGIPFVAALTKADKLKKS--QLAACQSEFEEICAPYGCLGVYLTSAENGYGMDALR 185 Query: 204 KAILETIN 211 + + ++ Sbjct: 186 ACLEDHLH 193 >gi|49483916|ref|YP_041140.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MRSA252] gi|257425789|ref|ZP_05602213.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 55/2053] gi|257428455|ref|ZP_05604853.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 65-1322] gi|257431089|ref|ZP_05607466.1| GTP-binding protein engB [Staphylococcus aureus subsp. aureus 68-397] gi|257433772|ref|ZP_05610130.1| GTPase EngB [Staphylococcus aureus subsp. aureus E1410] gi|257436688|ref|ZP_05612732.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M876] gi|282904245|ref|ZP_06312133.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C160] gi|282906070|ref|ZP_06313925.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus Btn1260] gi|282908985|ref|ZP_06316803.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911301|ref|ZP_06319103.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus WBG10049] gi|282914470|ref|ZP_06322256.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M899] gi|282919439|ref|ZP_06327174.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C427] gi|282924816|ref|ZP_06332482.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C101] gi|283958425|ref|ZP_06375876.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus A017934/97] gi|293503548|ref|ZP_06667395.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 58-424] gi|293510563|ref|ZP_06669268.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M809] gi|293537105|ref|ZP_06671785.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M1015] gi|295428245|ref|ZP_06820874.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590792|ref|ZP_06949430.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MN8] gi|56749018|sp|Q6GG32|ENGB_STAAR RecName: Full=Probable GTP-binding protein EngB gi|49242045|emb|CAG40744.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257271483|gb|EEV03629.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 55/2053] gi|257275296|gb|EEV06783.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 65-1322] gi|257278037|gb|EEV08685.1| GTP-binding protein engB [Staphylococcus aureus subsp. aureus 68-397] gi|257281865|gb|EEV12002.1| GTPase EngB [Staphylococcus aureus subsp. aureus E1410] gi|257284039|gb|EEV14162.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M876] gi|282313182|gb|EFB43578.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C101] gi|282317249|gb|EFB47623.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C427] gi|282321651|gb|EFB51976.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M899] gi|282324996|gb|EFB55306.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus WBG10049] gi|282327249|gb|EFB57544.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331362|gb|EFB60876.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus Btn1260] gi|282595863|gb|EFC00827.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C160] gi|283790574|gb|EFC29391.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus A017934/97] gi|290919950|gb|EFD97018.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M1015] gi|291095214|gb|EFE25479.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 58-424] gi|291466454|gb|EFF08975.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M809] gi|295127645|gb|EFG57282.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575678|gb|EFH94394.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MN8] gi|312437868|gb|ADQ76939.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus TCH60] gi|315195576|gb|EFU25963.1| GTPase EngB [Staphylococcus aureus subsp. aureus CGS00] Length = 196 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 9/151 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N Sbjct: 21 PETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY---------NIDE 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Q D ++++ Sbjct: 72 QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDPTQDDILMYNY 131 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + ++ TK DK+ Q+ ++ K Sbjct: 132 LKHFDIPTLVICTKEDKIPKGKVQKHIKNIK 162 >gi|89256263|ref|YP_513625.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. holarctica LVS] gi|115314717|ref|YP_763440.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. holarctica OSU18] gi|118497636|ref|YP_898686.1| GTPase EngB [Francisella tularensis subsp. novicida U112] gi|134302057|ref|YP_001122026.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. tularensis WY96-3418] gi|167011014|ref|ZP_02275945.1| GTPase EngB [Francisella tularensis subsp. holarctica FSC200] gi|169656584|ref|YP_001428389.2| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. holarctica FTNF002-00] gi|187931483|ref|YP_001891467.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. mediasiatica FSC147] gi|195536337|ref|ZP_03079344.1| ATP/GTP-binding protein [Francisella tularensis subsp. novicida FTE] gi|208779438|ref|ZP_03246784.1| ATP/GTP-binding protein [Francisella novicida FTG] gi|254367601|ref|ZP_04983622.1| ATP/GTP-binding protein [Francisella tularensis subsp. holarctica 257] gi|254369249|ref|ZP_04985261.1| hypothetical protein FTAG_00203 [Francisella tularensis subsp. holarctica FSC022] gi|290953603|ref|ZP_06558224.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. holarctica URFT1] gi|295313104|ref|ZP_06803794.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. holarctica URFT1] gi|119369197|sp|Q2A3S7|ENGB_FRATH RecName: Full=Probable GTP-binding protein EngB gi|119369198|sp|Q0BM81|ENGB_FRATO RecName: Full=Probable GTP-binding protein EngB gi|166225954|sp|A0Q6R7|ENGB_FRATN RecName: Full=Probable GTP-binding protein EngB gi|166225955|sp|A4IYA4|ENGB_FRATW RecName: Full=Probable GTP-binding protein EngB gi|172044104|sp|A7NBT0|ENGB_FRATF RecName: Full=Probable GTP-binding protein EngB gi|238691555|sp|B2SG30|ENGB_FRATM RecName: Full=Probable GTP-binding protein EngB gi|89144094|emb|CAJ79345.1| ATP/GTP-binding protein [Francisella tularensis subsp. holarctica LVS] gi|115129616|gb|ABI82803.1| GTPase [Francisella tularensis subsp. holarctica OSU18] gi|118423542|gb|ABK89932.1| ATP/GTP-binding protein [Francisella novicida U112] gi|134049834|gb|ABO46905.1| GTP binding protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134253412|gb|EBA52506.1| ATP/GTP-binding protein [Francisella tularensis subsp. holarctica 257] gi|157122199|gb|EDO66339.1| hypothetical protein FTAG_00203 [Francisella tularensis subsp. holarctica FSC022] gi|164551652|gb|ABU61433.2| GTP-binding protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187712392|gb|ACD30689.1| ATP/GTP-binding protein [Francisella tularensis subsp. mediasiatica FSC147] gi|194372814|gb|EDX27525.1| ATP/GTP-binding protein [Francisella tularensis subsp. novicida FTE] gi|208745238|gb|EDZ91536.1| ATP/GTP-binding protein [Francisella novicida FTG] gi|332678344|gb|AEE87473.1| GTP-binding protein EngB [Francisella cf. novicida Fx1] Length = 197 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/161 (40%), Positives = 93/161 (57%), Gaps = 19/161 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++K+ +I G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 3 YSKAKYIM--GAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D N NN LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLF---DLGN--NN----RLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSY----QIVLTKIDKLS 163 L+D RH +K+ D S + + A+S+ I+LTK DKL+ Sbjct: 112 LVDSRHELKEFD----SLMIEMAISFDLNLHILLTKADKLN 148 >gi|317401519|gb|EFV82149.1| GTP-binding protein engB [Achromobacter xylosoxidans C54] Length = 207 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 4/187 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + LP PE+ F GRSN GKS+ IN+L N++ LA +S PGRT+ +N F Sbjct: 9 FLTSAARLDQLPPPDAPEVCFVGRSNAGKSTAINVLCNQRRLAFSSKTPGRTRLINMFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + + ++ LVD+PGYGYA + + W ++ YL +R +L + LLID R G Sbjct: 69 PDPLDPEGHI--GYLVDLPGYGYASVARDEKEKWADILGGYLRDRESLAGIVLLIDIRRG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V ++D+ + +F+ +LTK DKL T+ + + + H IP S+ Sbjct: 127 VTELDRRLANFIAPTGRPVLALLTKADKLPYGQRVRTVFSVRKDLADIGALH--TIPFSA 184 Query: 194 VKRKGIE 200 +R G+E Sbjct: 185 PERIGLE 191 >gi|237753230|ref|ZP_04583710.1| GTPase EngB [Helicobacter winghamensis ATCC BAA-430] gi|229375497|gb|EEO25588.1| GTPase EngB [Helicobacter winghamensis ATCC BAA-430] Length = 207 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 105/189 (55%), Gaps = 17/189 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + P E+AF GRSNVGKS+LIN+L N+KNLA++S+ PG+TQ +NFF Sbjct: 11 FLTSAQNLSQCPPPMLSEVAFLGRSNVGKSTLINLLCNQKNLAKSSSTPGKTQLINFFAT 70 Query: 74 KDFSNLKNN---LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + +N +++ + + VD+PG+GYA+ K + W +V +L +R +R L+D Sbjct: 71 QWKANSQDSTQEVLKLMFVDLPGFGYAKVAKSQKELWNRNLVEFLRKRDCIRLFVHLVDS 130 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID ++ +F+++ Q V TK DKL+ Q L+ A P Sbjct: 131 RHPSLEIDANLVAFVEQFLRGDQRFVQVFTKFDKLN-VNEQNKLK----------AAFPN 179 Query: 188 VIPTSSVKR 196 + +SS+K+ Sbjct: 180 ALFSSSLKK 188 >gi|119472911|ref|XP_001258441.1| GTP binding protein (EngB), putative [Neosartorya fischeri NRRL 181] gi|119406593|gb|EAW16544.1| GTP binding protein (EngB), putative [Neosartorya fischeri NRRL 181] Length = 321 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ +N F K + L+ Sbjct: 97 PEVAFLGRSNVGKSSLLNAIMG-KEMCWTSSKPGRTREMNAF---GIGGTKGGESKIVLL 152 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG K + WG I++YL R LR ++LID HG+K+ D+D+ K A Sbjct: 153 DMPGYG-----KGSRTEWGIEILKYLQGRRQLRRAFILIDSLHGIKKKDEDILMLFRKYA 207 Query: 150 VSYQIVLTKIDKL 162 + +QI+L+K+DK+ Sbjct: 208 IPHQIILSKVDKV 220 >gi|167038047|ref|YP_001665625.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040912|ref|YP_001663897.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter sp. X514] gi|256752434|ref|ZP_05493293.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1] gi|300914948|ref|ZP_07132264.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter sp. X561] gi|307723818|ref|YP_003903569.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter sp. X513] gi|320116456|ref|YP_004186615.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687604|sp|B0K530|ENGB_THEPX RecName: Full=Probable GTP-binding protein EngB gi|238687677|sp|B0KBA1|ENGB_THEP3 RecName: Full=Probable GTP-binding protein EngB gi|166855152|gb|ABY93561.1| small GTP-binding protein [Thermoanaerobacter sp. X514] gi|166856881|gb|ABY95289.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748703|gb|EEU61748.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1] gi|300889883|gb|EFK85029.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter sp. X561] gi|307580879|gb|ADN54278.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter sp. X513] gi|319929547|gb|ADV80232.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 192 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 12/175 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK P+I GRSNVGKS+LIN ++NRKNLA+TS+ PG+T+ +NF+ L NN Sbjct: 19 PKDNLPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSRPGKTRGINFY-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K+ W I +L+ LR LID R + D + ++ Sbjct: 70 KFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSQNLRHGLFLIDIRRNPTEDDFLMINW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 K + + +VLTK DK++ + +++ +E + + + EVI S++++ G+ Sbjct: 130 FKHKNLPFTVVLTKADKVNKSESRKAVED---ICKIFKINREEVIIFSALEKMGV 181 >gi|157364593|ref|YP_001471360.1| small GTP-binding protein [Thermotoga lettingae TMO] gi|157315197|gb|ABV34296.1| small GTP-binding protein [Thermotoga lettingae TMO] Length = 168 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/172 (38%), Positives = 100/172 (58%), Gaps = 20/172 (11%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALV 89 EI F GRSNVGKS+L+N+L N+K +AR S PG+T+ +NF+ V + + V Sbjct: 4 EICFVGRSNVGKSTLLNVLFNKK-IARASKRPGKTRSINFYEVNRKY----------YFV 52 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D+PGYGYA A KK W +I +Y R+ ++ LLIDCR +++ D+ + + Sbjct: 53 DLPGYGYAEASKKERQRWALIIEKYFENRAHQIKLSILLIDCRLFLQESDKMFLEWSEYF 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 V IVL+K+DKL+ + E K +R + + EVIP S++ +KGI+ Sbjct: 113 QVPVTIVLSKVDKLNQS---ELCRK----VREFEKQNLEVIPYSAITKKGID 157 >gi|83721256|ref|YP_443541.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia thailandensis E264] gi|83655081|gb|ABC39144.1| conserved hypothetical protein [Burkholderia thailandensis E264] Length = 228 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 86/168 (51%), Gaps = 5/168 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 19 FFTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSV 78 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL R L + L++D R Sbjct: 79 GPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRP 133 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + ++D+ + + +LTK DKL+ + L T+ + Y Sbjct: 134 LTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAY 181 >gi|257468337|ref|ZP_05632431.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] gi|317062611|ref|ZP_07927096.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313688287|gb|EFS25122.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 196 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 19/199 (9%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 V F KSA ++ + PE + E AF GRSNVGKSSLIN + RK LA+TS Sbjct: 3 VKQADFVKSA-VYEKDYPE-----QLNNMEFAFVGRSNVGKSSLINSITGRKKLAKTSKT 56 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N+F NN +VD+PGYG+A+ PK+ WG + RY++ Sbjct: 57 PGRTQLINYFKI-------NN--EFFIVDLPGYGFAKVPKEMKAEWGKTMDRYIASPRK- 106 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V++L+D R Q D ++ +LD + ++I+ TKIDK+S + +++ K I + Sbjct: 107 KLVFVLLDIRRIPSQEDIEMLVYLDHHDIPFKIIFTKIDKVSNNEKFKVMKEIKKKIEFH 166 Query: 182 PTAHPEVIPTSSVKRKGIE 200 + +V SS+ G E Sbjct: 167 ---NEDVFFHSSLSDNGKE 182 >gi|21672684|ref|NP_660751.1| GTPase EngB [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008425|sp|Q8K9C9|ENGB_BUCAP RecName: Full=Probable GTP-binding protein EngB gi|21623323|gb|AAM67962.1| hypothetical GTP-binding protein in polA-hemN [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 201 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/192 (37%), Positives = 102/192 (53%), Gaps = 14/192 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 FL+ + I + EIAF G SN GKSS IN L N+K LAR S PGRTQ +N F V Sbjct: 11 FLKSISNISDIQIEHGIEIAFIGYSNSGKSSAINALTNQKKLARFSKTPGRTQLINLFQV 70 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 DF +VD+PGYGYA+AP W +I YL +L+ + LL+D R+ Sbjct: 71 TSDFR----------IVDLPGYGYAKAPLLIKIKWQNMIYSYLKNSRSLKGLVLLMDIRY 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPT 191 +K +DQD+ S + ++LTK DK + + +K + L + H ++ Sbjct: 121 PLKILDQDIISMALNCKIPILLLLTKCDKFTINNQKIQFQKVYEKLDKFLNELHIQLF-- 178 Query: 192 SSVKRKGIEVLR 203 SS+K+ GIE L+ Sbjct: 179 SSLKKIGIEKLK 190 >gi|116751466|ref|YP_848153.1| HSR1-related GTP-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116700530|gb|ABK19718.1| GTP-binding protein, HSR1-related [Syntrophobacter fumaroxidans MPOB] Length = 198 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/144 (43%), Positives = 82/144 (56%), Gaps = 9/144 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P PE+AF+GRSNVGKSSLIN L+ R+ L RTS PG+TQ +NFF L N Sbjct: 20 GQYPDDHLPEVAFAGRSNVGKSSLINCLLQRRKLVRTSRTPGQTQTINFF-------LIN 72 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L VD+PGYG+AR P WG ++ YL R LR V ++D RH D + Sbjct: 73 GL--FYCVDLPGYGFARVPMAVRAQWGPMVESYLGGRPNLRGVVQILDARHPPSPDDLKL 130 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPT 165 +++L + + VLTK DK+ T Sbjct: 131 WNWLIDRKIPAVPVLTKADKVPRT 154 >gi|307265818|ref|ZP_07547369.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter wiegelii Rt8.B1] gi|306919213|gb|EFN49436.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter wiegelii Rt8.B1] Length = 194 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/175 (37%), Positives = 99/175 (56%), Gaps = 12/175 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK P+I GRSNVGKS+LIN ++NRKNLA+TS+ PG+T+ +NF+ L NN Sbjct: 19 PKDNFPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRGINFY-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA+ K+ W I +L+ LR LLID R + D + ++ Sbjct: 70 GFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSKYLRHALLLIDIRRTPTEDDFLMVNW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 K + + +VLTK DK++ + E + + + + + +I SS+K+ G+ Sbjct: 130 FRHKELPFTVVLTKADKVNKS---EIVNAVEGICKTFNIDSERIIVFSSLKKMGV 181 >gi|78064955|ref|YP_367724.1| GTPase EngB [Burkholderia sp. 383] gi|119368797|sp|Q39KD6|ENGB_BURS3 RecName: Full=Probable GTP-binding protein EngB gi|77965700|gb|ABB07080.1| cell division checkpoint GTPase YihA [Burkholderia sp. 383] Length = 219 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/148 (41%), Positives = 83/148 (56%), Gaps = 8/148 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+ FS + Sbjct: 20 LPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINY-----FSVGPADE 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + +D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETL 171 + +LTK DKL T QE++ Sbjct: 135 WFVPTGKPIHTLLTKCDKL---TRQESI 159 >gi|326796700|ref|YP_004314520.1| GTP-binding protein engB [Marinomonas mediterranea MMB-1] gi|326547464|gb|ADZ92684.1| GTP-binding protein engB [Marinomonas mediterranea MMB-1] Length = 212 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 19/200 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ ++ P E+AF+GRSN GKS+ +N L N++ LARTS PGRTQ +N F Sbjct: 13 FIKSAEKLSQCPVDQGLEVAFAGRSNAGKSTALNTLTNQRKLARTSKTPGRTQLINCF-- 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N+ L+D+PGYG+A+ P +W + YL R +L V L++D RH Sbjct: 71 ------GMNVEDRRLIDLPGYGFAKVPVAMKINWQKHMQDYLMNRRSLVGVVLVMDVRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPT- 191 +K+ D + + V ++LTK DKL A+ L+ KY+ N EVI + Sbjct: 125 LKEFDVMMLDWAKSNKVQVHVLLTKSDKLKRGPAKSAALQVKKYMKEN------EVIGSV 178 Query: 192 ---SSVKRKGIEVLRKAILE 208 S++K G++ LR + E Sbjct: 179 QNFSALKNDGVDTLRLKLAE 198 >gi|56707761|ref|YP_169657.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. tularensis SCHU S4] gi|110670232|ref|YP_666789.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. tularensis FSC198] gi|224456831|ref|ZP_03665304.1| GTPase EngB [Francisella tularensis subsp. tularensis MA00-2987] gi|254370264|ref|ZP_04986269.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis FSC033] gi|254874574|ref|ZP_05247284.1| GTP-binding protein engB [Francisella tularensis subsp. tularensis MA00-2987] gi|81597736|sp|Q5NH35|ENGB_FRATT RecName: Full=Probable GTP-binding protein EngB gi|119369196|sp|Q14II7|ENGB_FRAT1 RecName: Full=Probable GTP-binding protein EngB gi|56604253|emb|CAG45269.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320565|emb|CAL08652.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis FSC198] gi|151568507|gb|EDN34161.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis FSC033] gi|254840573|gb|EET19009.1| GTP-binding protein engB [Francisella tularensis subsp. tularensis MA00-2987] gi|282158932|gb|ADA78323.1| GTPase EngB [Francisella tularensis subsp. tularensis NE061598] Length = 197 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/161 (40%), Positives = 93/161 (57%), Gaps = 19/161 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++K+ +I G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 3 YSKAKYIM--GAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D N NN LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLF---DLGN--NN----RLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSY----QIVLTKIDKLS 163 L+D RH +K+ D S + + A+S+ I+LTK DKL+ Sbjct: 112 LVDLRHELKEFD----SLMIEMAISFDLNLHILLTKADKLN 148 >gi|332139423|ref|YP_004425161.1| ribosome biogenesis GTP-binding protein YsxC [Alteromonas macleodii str. 'Deep ecotype'] gi|238693289|sp|B4S284|ENGB_ALTMD RecName: Full=Probable GTP-binding protein EngB gi|327549445|gb|AEA96163.1| ribosome biogenesis GTP-binding protein YsxC [Alteromonas macleodii str. 'Deep ecotype'] Length = 212 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 84/149 (56%), Gaps = 9/149 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P+I L E+AF+GRSN GKSS +N L ++NLARTS PGRTQ +N F Sbjct: 9 FFTSAPDIRHLKNDTGIEVAFAGRSNAGKSSALNTLTRQRNLARTSKTPGRTQLINVFEL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYG+A+ P W + YL +R +L+ + +L+D RH Sbjct: 69 EE---------ELRLVDLPGYGFAKVPVAMKKKWQASLGEYLQKRKSLKGLVVLMDIRHP 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 K +DQD+ + + + +LTK DKL Sbjct: 120 FKDLDQDLIHWAVESNIPVLALLTKADKL 148 >gi|54113475|gb|AAV29371.1| NT02FT0759 [synthetic construct] Length = 197 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 17/154 (11%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ +N F Sbjct: 8 YIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D N NN LVD+PGYGYA+ + W + YL+ R L + LL+D RH Sbjct: 66 -DLGN--NN----RLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVLLVDLRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSY----QIVLTKIDKLS 163 +K+ D S + + A+S+ I+LTK DKL+ Sbjct: 119 LKEFD----SLMIEMAISFDLNLHILLTKADKLN 148 >gi|251798420|ref|YP_003013151.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. JDR-2] gi|247546046|gb|ACT03065.1| small GTP-binding protein [Paenibacillus sp. JDR-2] Length = 201 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/138 (44%), Positives = 81/138 (58%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LN++ D Sbjct: 19 PVDALPEIALAGRSNVGKSSLINKLILRKNLARTSSQPGKTQQLNYYRVNDM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD PGYGYA+ K + +G +I Y+ +R L+ L+ID RH + D ++ + Sbjct: 71 -VYFVDFPGYGYAKVSKTQRELFGQMIETYIRDRKELKLQLLVIDMRHAPSKDDVLMYHW 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L V IV TK DK+ Sbjct: 130 LKHYNVPTCIVCTKADKI 147 >gi|172059372|ref|YP_001807024.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia ambifaria MC40-6] gi|238689153|sp|B1YRR0|ENGB_BURA4 RecName: Full=Probable GTP-binding protein EngB gi|171991889|gb|ACB62808.1| GTP-binding protein HSR1-related [Burkholderia ambifaria MC40-6] Length = 219 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 5/158 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 20 LPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + +D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +LTK DKL+ + L T+ + Y Sbjct: 135 WFVPTGKPIHTLLTKCDKLTRQESINALRNTQKGLDAY 172 >gi|171318379|ref|ZP_02907537.1| GTP-binding protein HSR1-related [Burkholderia ambifaria MEX-5] gi|171096457|gb|EDT41356.1| GTP-binding protein HSR1-related [Burkholderia ambifaria MEX-5] Length = 219 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 5/158 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 20 LPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + +D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +LTK DKL+ + L T+ + Y Sbjct: 135 WFVPTGKPIHTLLTKCDKLTRQESINALRNTQKGLDAY 172 >gi|115350353|ref|YP_772192.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia ambifaria AMMD] gi|170700725|ref|ZP_02891720.1| GTP-binding protein HSR1-related [Burkholderia ambifaria IOP40-10] gi|122324237|sp|Q0BJ15|ENGB_BURCM RecName: Full=Probable GTP-binding protein EngB gi|115280341|gb|ABI85858.1| cell division checkpoint GTPase YihA [Burkholderia ambifaria AMMD] gi|170134395|gb|EDT02728.1| GTP-binding protein HSR1-related [Burkholderia ambifaria IOP40-10] Length = 219 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 5/158 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 20 LPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 74 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL+ RS L + L++D R + +D+ + Sbjct: 75 PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLILMMDSRRPLTDLDRRMIE 134 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +LTK DKL+ + L T+ + Y Sbjct: 135 WFVPTGKPIHTLLTKCDKLTRQESINALRNTQKGLDAY 172 >gi|219122173|ref|XP_002181426.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407412|gb|EEC47349.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 197 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 12/152 (7%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 IF+ G + P + E F GRSNVGKSSL+N++ NRK+LA TS PG+TQ NFF Sbjct: 5 IFVTGAVTMEGCPPSDRGEAVFIGRSNVGKSSLVNMVTNRKSLAYTSKRPGKTQQFNFFA 64 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +D N +VD+PG+GYA+ P++ W + Y++ R TLR ++ L+D RH Sbjct: 65 DQDSFN---------IVDLPGFGYAKVPEELRKEWSIFMDAYIANRKTLRVLFHLVDGRH 115 Query: 133 GVKQIDQDVFSFLDK---KAVSYQIVLTKIDK 161 G D + + +Y +VLTK DK Sbjct: 116 GPTDEDASIMRRVGDLLPGYATYVVVLTKADK 147 >gi|227355156|ref|ZP_03839567.1| GTP-binding protein [Proteus mirabilis ATCC 29906] gi|227164943|gb|EEI49790.1| GTP-binding protein [Proteus mirabilis ATCC 29906] Length = 200 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 9/167 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 T F F+ P+I LP EIAF+GRSN GKSS +N L + LARTS PGR Sbjct: 16 TQFNYQKAHFIISAPDIRHLPPDTGIEIAFAGRSNAGKSSALNALTQQNGLARTSKTPGR 75 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F ++ LVD+PGYGYA+ P++ W + YL +R L+ V Sbjct: 76 TQLINLFQIEE---------GRRLVDLPGYGYAQVPEEMKRKWQRSLGEYLQKRECLKGV 126 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL 171 +L+D RH +K +D + + + ++LTK DKL+ ++ L Sbjct: 127 VILMDIRHPLKDLDMQMIDWAVDSELPTLVLLTKADKLASGARKKQL 173 >gi|148545398|ref|YP_001265500.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas putida F1] gi|166225971|sp|A5VWQ6|ENGB_PSEP1 RecName: Full=Probable GTP-binding protein EngB gi|148509456|gb|ABQ76316.1| cell division checkpoint GTPase YihA [Pseudomonas putida F1] Length = 210 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 90/170 (52%), Gaps = 10/170 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF D L VD Sbjct: 33 EVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFSLDDERRL---------VD 82 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P W + YL R LR V L++D RH + D+ + + ++ Sbjct: 83 LPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRGVILMMDVRHPMTDFDKMMLDWAKASSM 142 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 I+LTK DKL+ + TL K + IR + S+ KR G+E Sbjct: 143 PMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQLFSAPKRLGVE 192 >gi|104779390|ref|YP_605888.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas entomophila L48] gi|166225969|sp|Q1IGY1|ENGB_PSEE4 RecName: Full=Probable GTP-binding protein EngB gi|95108377|emb|CAK13071.1| putative GTP-binding protein EngB [Pseudomonas entomophila L48] Length = 210 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 89/170 (52%), Gaps = 10/170 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF D L VD Sbjct: 33 EVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFSLDDERRL---------VD 82 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P W + YL R LR V L++D RH + D+ + + + Sbjct: 83 LPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRGVILMMDVRHPMTDFDKMMLDWARASGM 142 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 I+LTK DKL+ + TL K + IR + S+ KR G+E Sbjct: 143 PMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDSTTIQLFSAPKRLGLE 192 >gi|26986869|ref|NP_742294.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas putida KT2440] gi|38372202|sp|Q88RK5|ENGB_PSEPK RecName: Full=Probable GTP-binding protein EngB gi|24981471|gb|AAN65758.1|AE016202_1 GTP-binding protein, putative [Pseudomonas putida KT2440] gi|313496496|gb|ADR57862.1| EngB [Pseudomonas putida BIRD-1] Length = 210 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 90/170 (52%), Gaps = 10/170 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF D L VD Sbjct: 33 EVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFSLDDERRL---------VD 82 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P W + YL R LR V L++D RH + D+ + + ++ Sbjct: 83 LPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRGVILMMDVRHPMTDFDKMMLDWAKASSM 142 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 I+LTK DKL+ + TL K + IR + S+ KR G+E Sbjct: 143 PMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQLFSAPKRLGVE 192 >gi|254373002|ref|ZP_04988491.1| ATP/GTP-binding protein [Francisella tularensis subsp. novicida GA99-3549] gi|254374451|ref|ZP_04989933.1| hypothetical protein FTDG_00620 [Francisella novicida GA99-3548] gi|151570729|gb|EDN36383.1| ATP/GTP-binding protein [Francisella novicida GA99-3549] gi|151572171|gb|EDN37825.1| hypothetical protein FTDG_00620 [Francisella novicida GA99-3548] Length = 197 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 19/161 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++K+ +I G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 3 YSKAKYIM--GAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D NN LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLFDLGD-----NN----RLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSY----QIVLTKIDKLS 163 L+D RH +K+ D S + + A+S+ I+LTK DKL+ Sbjct: 112 LVDSRHELKEFD----SLMIEMAISFDLNLHILLTKADKLN 148 >gi|317497643|ref|ZP_07955959.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae bacterium 5_1_63FAA] gi|291559839|emb|CBL38639.1| ribosome biogenesis GTP-binding protein YsxC/EngB [butyrate-producing bacterium SSC/2] gi|316895074|gb|EFV17240.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae bacterium 5_1_63FAA] Length = 200 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +N++ N+ L Sbjct: 18 LPDNTLPEVAFAGKSNVGKSSLINALMNRKSYARISAQPGKTQTINYY------NINEEL 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYG+A+ + + WG +I YL L+ V+LLID RH + D ++ Sbjct: 72 ---YYVDLPGYGFAKVTQSVKEKWGHMIENYLQTSKQLKMVFLLIDIRHKPSKNDVMMYD 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ I+ TK+DKL + + L++ + ++ + P S++ ++G Sbjct: 129 WILHNGYRPVIIATKLDKLKRSQVPKHLKEIRTELQM--DKETPIFPFSALSKQG 181 >gi|224024430|ref|ZP_03642796.1| hypothetical protein BACCOPRO_01155 [Bacteroides coprophilus DSM 18228] gi|224017652|gb|EEF75664.1| hypothetical protein BACCOPRO_01155 [Bacteroides coprophilus DSM 18228] Length = 204 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 15/190 (7%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKN 81 + P PE AF GRSNVGKSSLIN+L + LA TS PG+T +N F V K++ Sbjct: 17 MCPATHLPEYAFIGRSNVGKSSLINMLTKQPKLAMTSATPGKTLLINHFLVNKEW----- 71 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ KK +D LI Y+ ER + C+++L+D R ++ID + Sbjct: 72 -----YLVDLPGYGYAQRGKKMMDKIEKLIQHYVLEREQMTCLFVLVDSRLAPQKIDMEF 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 +L + V + I+ TK DK S + ++ + P +S+ K+ G Sbjct: 127 IEWLGENGVPFAIIFTKADKQSAGKTRANVDIYLSELSKQWEELPPYFISSAEKKTG--- 183 Query: 202 LRKAILETIN 211 RK IL+ I Sbjct: 184 -RKEILDYIE 192 >gi|167031160|ref|YP_001666391.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas putida GB-1] gi|189037186|sp|B0KG04|ENGB_PSEPG RecName: Full=Probable GTP-binding protein EngB gi|166857648|gb|ABY96055.1| small GTP-binding protein [Pseudomonas putida GB-1] Length = 210 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/170 (39%), Positives = 89/170 (52%), Gaps = 10/170 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF D L VD Sbjct: 33 EVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFSLDDERRL---------VD 82 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P W + YL R LR V L++D RH + D+ + + + Sbjct: 83 LPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRGVILMMDVRHPMTDFDKMMLDWAKASGM 142 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 I+LTK DKL+ + TL K + IR + S+ KR G+E Sbjct: 143 PMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQLFSAPKRLGVE 192 >gi|313894793|ref|ZP_07828353.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral taxon 137 str. F0430] gi|312976474|gb|EFR41929.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral taxon 137 str. F0430] Length = 207 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 9/212 (4%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + TK+ ++L P+ PE+AF GRSNVGKSSLIN L + LAR S+ Sbjct: 1 MQESVVVTKA--VYLASAVRKDQYPEVRRPEVAFIGRSNVGKSSLINSLTRIRQLARVSS 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ +NF+ + + +VD+PGYGYA+A + + +W I Y Sbjct: 59 KPGKTQTINFYELLLRIDGGEERHPVHIVDLPGYGYAKAARDSRKTWAKFIEEYFLTSEY 118 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V LL+D RH + D+++FS+L + +V TK DKL + + + R Sbjct: 119 LRFVCLLLDIRHMPMESDRNMFSWLIAHDIPVLVVATKADKLGKNACRAQIAAMR---RA 175 Query: 181 YPTAHPEVIPTSSVKRKG----IEVLRKAILE 208 ++P +S K +G ++V++ ++E Sbjct: 176 LGVPELTILPYASPKNEGRSELLDVMKDNLIE 207 >gi|156085860|ref|XP_001610339.1| GTP-binding protein [Babesia bovis T2Bo] gi|154797592|gb|EDO06771.1| GTP-binding protein, putative [Babesia bovis] Length = 260 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 29/202 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRK-------------------NLARTSNAPGRT 65 PK P++A GRSNVGKSS+IN L+ R+ A SN PGRT Sbjct: 51 PKKKIPQVAIVGRSNVGKSSIINSLLYRQMIPHFARNMLSNGQLLKNPKFAPVSNNPGRT 110 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 +H+ F D ++LVD+PGYG+A+ + W L+ +YL E ++L+ V Sbjct: 111 RHMFTF---DLG------AELSLVDLPGYGFAKVNDNIRNEWSVLVNKYLEESTSLQRVL 161 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTA 184 LID R G + D ++S L++ V +Q+VLTK + L P ++ ++ + T Sbjct: 162 SLIDARRGPMERDLKLWSMLEELRVPFQVVLTKCEALKPIELHMVCQRVAEMVLAHGETV 221 Query: 185 HPEVIPTSSVKRKGIEVLRKAI 206 HP + TS++K+ GI LR +I Sbjct: 222 HPYIHSTSALKQLGIHELRLSI 243 >gi|241668335|ref|ZP_04755913.1| GTPase EngB [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876868|ref|ZP_05249578.1| ATP/GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842889|gb|EET21303.1| ATP/GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 197 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 93/161 (57%), Gaps = 19/161 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 +TK+ +I G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 3 YTKAKYIM--GAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F +L +N LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLF------DLGDN---KRLVDLPGYGYAKVSEAIKKQWQSEMENYLTTRKCLGGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSY----QIVLTKIDKLS 163 L+D RH +K+ D S + + A+S+ I+LTK DKL+ Sbjct: 112 LVDSRHELKEFD----SLMIEMAISFDLDLHILLTKADKLN 148 >gi|167627772|ref|YP_001678272.1| ribosome biogenesis GTP-binding protein YsxC [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189037179|sp|B0TZB8|ENGB_FRAP2 RecName: Full=Probable GTP-binding protein EngB gi|167597773|gb|ABZ87771.1| ATP/GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 197 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 19/161 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 +TK+ +I G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 3 YTKAKYIM--GAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D + K LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLF---DLGDNKR------LVDLPGYGYAKVSEAIKKQWQSEMENYLTTRKCLGGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSY----QIVLTKIDKLS 163 L+D RH +K+ D S + + A+S+ I+LTK DKL+ Sbjct: 112 LVDSRHELKEFD----SLMIEMAISFDLNLHILLTKADKLN 148 >gi|167765941|ref|ZP_02437994.1| hypothetical protein CLOSS21_00432 [Clostridium sp. SS2/1] gi|167712439|gb|EDS23018.1| hypothetical protein CLOSS21_00432 [Clostridium sp. SS2/1] Length = 213 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 11/175 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +N++ N+ L Sbjct: 31 LPDNTLPEVAFAGKSNVGKSSLINALMNRKSYARISAQPGKTQTINYY------NINEEL 84 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYG+A+ + + WG +I YL L+ V+LLID RH + D ++ Sbjct: 85 ---YYVDLPGYGFAKVTQSVKEKWGHMIENYLQTSKQLKMVFLLIDIRHKPSKNDVMMYD 141 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ I+ TK+DKL + + L++ + ++ + P S++ ++G Sbjct: 142 WILHNGYRPVIIATKLDKLKRSQVPKHLKEIRTELQ--MDKETPIFPFSALSKQG 194 >gi|53720790|ref|YP_109776.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei K96243] gi|53723822|ref|YP_104135.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei ATCC 23344] gi|126454410|ref|YP_001068003.1| GTPase EngB [Burkholderia pseudomallei 1106a] gi|134283345|ref|ZP_01770046.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 305] gi|167721546|ref|ZP_02404782.1| GTPase EngB [Burkholderia pseudomallei DM98] gi|167740518|ref|ZP_02413292.1| GTPase EngB [Burkholderia pseudomallei 14] gi|167817725|ref|ZP_02449405.1| GTPase EngB [Burkholderia pseudomallei 91] gi|167826122|ref|ZP_02457593.1| GTPase EngB [Burkholderia pseudomallei 9] gi|167847633|ref|ZP_02473141.1| GTPase EngB [Burkholderia pseudomallei B7210] gi|167896206|ref|ZP_02483608.1| GTPase EngB [Burkholderia pseudomallei 7894] gi|167904588|ref|ZP_02491793.1| GTPase EngB [Burkholderia pseudomallei NCTC 13177] gi|167912852|ref|ZP_02499943.1| GTPase EngB [Burkholderia pseudomallei 112] gi|167920811|ref|ZP_02507902.1| GTPase EngB [Burkholderia pseudomallei BCC215] gi|228969299|ref|YP_335109.2| GTP-binding protein [Burkholderia pseudomallei 1710b] gi|237814114|ref|YP_002898565.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei MSHR346] gi|242314396|ref|ZP_04813412.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 1106b] gi|254180370|ref|ZP_04886968.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 1655] gi|254190333|ref|ZP_04896841.1| GTP-binding protein, EngB family [Burkholderia pseudomallei Pasteur 52237] gi|254198500|ref|ZP_04904921.1| GTP-binding protein, EngB family [Burkholderia pseudomallei S13] gi|254261978|ref|ZP_04953032.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 1710a] gi|284159950|ref|YP_001060719.2| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 668] gi|81604191|sp|Q62GN6|ENGB_BURMA RecName: Full=Probable GTP-binding protein EngB gi|81607675|sp|Q63Q42|ENGB_BURPS RecName: Full=Probable GTP-binding protein EngB gi|119368796|sp|Q3JMU4|ENGB_BURP1 RecName: Full=Probable GTP-binding protein EngB gi|166225946|sp|A3P082|ENGB_BURP0 RecName: Full=Probable GTP-binding protein EngB gi|52211204|emb|CAH37193.1| putative GTP-binding cell division protein EngB [Burkholderia pseudomallei K96243] gi|52427245|gb|AAU47838.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344] gi|126228052|gb|ABN91592.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 1106a] gi|134245540|gb|EBA45633.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 305] gi|157938009|gb|EDO93679.1| GTP-binding protein, EngB family [Burkholderia pseudomallei Pasteur 52237] gi|169655240|gb|EDS87933.1| GTP-binding protein, EngB family [Burkholderia pseudomallei S13] gi|184210909|gb|EDU07952.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 1655] gi|237503427|gb|ACQ95745.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei MSHR346] gi|242137635|gb|EES24037.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 1106b] gi|254220667|gb|EET10051.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 1710a] gi|283775082|gb|ABN82823.2| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 668] Length = 219 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 9/191 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 10 FFTTVNHLRDLPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL R L + L++D R Sbjct: 70 GPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA----HPEVI 189 + ++D+ + + +LTK DKL+ + L T+ + Y A V Sbjct: 125 LTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGYAGKLTVQ 184 Query: 190 PTSSVKRKGIE 200 S++KR G++ Sbjct: 185 LFSALKRTGLD 195 >gi|168013946|ref|XP_001759525.1| predicted protein [Physcomitrella patens subsp. patens] gi|162689455|gb|EDQ75827.1| predicted protein [Physcomitrella patens subsp. patens] Length = 222 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 97/200 (48%), Gaps = 14/200 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P G PE A GRSNVGKSSLIN LV+RK LA+TS PG+TQ +N ++ Sbjct: 25 FIKSSSKESECPHEGHPEFALVGRSNVGKSSLINALVHRKELAQTSKKPGKTQLINHYLI 84 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+AP W Y +R TL V LL+D Sbjct: 85 NK---------TWYLVDLPGYGYAKAPTAIRTDWNEFTKGYFLKRQTLVSVLLLVDSSIE 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 +QID D +L + + IV TK D+ +E ++ I+ P Sbjct: 136 PQQIDLDCVGWLGRNKIPVTIVFTKCDRKKKKKNGGRKPEENIKDFLDRIKPLYAETPPW 195 Query: 189 IPTSSVKRKGIEVLRKAILE 208 I TSS +G E L + I + Sbjct: 196 IMTSSETNQGKEELLRHIAQ 215 >gi|297205853|ref|ZP_06923248.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii JV-V16] gi|297148979|gb|EFH29277.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii JV-V16] Length = 196 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/141 (43%), Positives = 85/141 (60%), Gaps = 9/141 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSSLIN +NRKNLARTS+ PG+TQ LNF+ NN Sbjct: 19 PRDILPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQTLNFYKV-------NN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR K + +G +I YL R L + ++ID RH D ++++ Sbjct: 70 SFYLVDVPGYGYARVSKAQREQFGEMIQDYLETRGNLEGLIIIIDARHEPTVDDIAMYNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPT 165 + +V TK+DK+ + Sbjct: 130 ALLLDLPILVVATKMDKIKKS 150 >gi|285017649|ref|YP_003375360.1| GTP-binding protein [Xanthomonas albilineans GPE PC73] gi|283472867|emb|CBA15372.1| probable gtp-binding protein [Xanthomonas albilineans] Length = 207 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 95/184 (51%), Gaps = 11/184 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 20 LPDDDGWEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQVQ--------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P++ W I Y R LR + +++D RH +K D+ + S Sbjct: 71 PERYLVDLPGYGYAKVPQELQAHWQSFIDTYFRTRQALRGLVVVMDIRHPLKDYDRQMLS 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + ++ + +LTK DKL + L++ K L++ + V S R+G++ Sbjct: 131 YAVQRGLPAHALLTKADKLGRGQQAQALQQVRKELLKAFGDT-VGVQTFSGASRQGVDEA 189 Query: 203 RKAI 206 R + Sbjct: 190 RAIV 193 >gi|241762863|ref|ZP_04760926.1| GTP-binding protein HSR1-related [Acidovorax delafieldii 2AN] gi|241368038|gb|EER62243.1| GTP-binding protein HSR1-related [Acidovorax delafieldii 2AN] Length = 244 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 99/191 (51%), Gaps = 15/191 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LP PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N F Sbjct: 31 FLTTAAQLHHLPPIDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINLFAL 90 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K + L D+PGYGYA + + W ++V YL R L + LL D R G Sbjct: 91 G-----KQGVTDAVLADLPGYGYAAVSRSDKVRWQQVMVNYLVSRPGLTGIVLLCDPRLG 145 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVI 189 + ++D+ + + ++ + + IVLTK DKL+ E+ K L I EV Sbjct: 146 LTELDEALLEVVRPRVEEGLKFLIVLTKADKLTRA------EQAKVLSITRLQAGGGEVK 199 Query: 190 PTSSVKRKGIE 200 S++K++G++ Sbjct: 200 MFSALKKQGVD 210 >gi|307721065|ref|YP_003892205.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurimonas autotrophica DSM 16294] gi|306979158|gb|ADN09193.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurimonas autotrophica DSM 16294] Length = 205 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 15/201 (7%) Query: 14 FLRGVPEIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ P + P++ E+ F RSNVGKSSL+N L N K LA+ S+ PG+T+ +N+F Sbjct: 9 FITSAPNVSAAPESEEQNEVVFMARSNVGKSSLLNALTNHKGLAKVSSTPGKTKLINYFD 68 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + VD+PG+GYA+ K W + Y+S R ++ LIDCRH Sbjct: 69 VTFLDRDSSEKIVAKFVDLPGFGYAKVAKSIKHDWEKNLTDYISNREEIKIFIHLIDCRH 128 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID V FL + A Q +L TKIDKL+ ++ L + +P A + Sbjct: 129 PHLEIDTSVSDFLFRTARENQYILQIFTKIDKLNQ-------KEQNALRKEFPNA----L 177 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS K++GI + K + + + Sbjct: 178 MVSSAKKRGISKIVKVVYDML 198 >gi|121600875|ref|YP_994425.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei SAVP1] gi|124385977|ref|YP_001027926.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei NCTC 10229] gi|126449374|ref|YP_001083021.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei NCTC 10247] gi|217424868|ref|ZP_03456365.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 576] gi|226198239|ref|ZP_03793810.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei Pakistan 9] gi|238562954|ref|ZP_00439635.2| GTP-binding protein, EngB family [Burkholderia mallei GB8 horse 4] gi|251767488|ref|ZP_04820124.1| GTP-binding protein, EngB family [Burkholderia mallei PRL-20] gi|254174807|ref|ZP_04881468.1| GTP-binding protein, EngB family [Burkholderia mallei ATCC 10399] gi|254201208|ref|ZP_04907572.1| GTP-binding protein, EngB family [Burkholderia mallei FMH] gi|254206549|ref|ZP_04912900.1| GTP-binding protein, EngB family [Burkholderia mallei JHU] gi|254357088|ref|ZP_04973362.1| GTP-binding protein, EngB family [Burkholderia mallei 2002721280] gi|121229685|gb|ABM52203.1| conserved hypothetical protein [Burkholderia mallei SAVP1] gi|124293997|gb|ABN03266.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei NCTC 10229] gi|126242244|gb|ABO05337.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei NCTC 10247] gi|147747102|gb|EDK54178.1| GTP-binding protein, EngB family [Burkholderia mallei FMH] gi|147752091|gb|EDK59157.1| GTP-binding protein, EngB family [Burkholderia mallei JHU] gi|148026152|gb|EDK84237.1| GTP-binding protein, EngB family [Burkholderia mallei 2002721280] gi|160695852|gb|EDP85822.1| GTP-binding protein, EngB family [Burkholderia mallei ATCC 10399] gi|217392324|gb|EEC32349.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 576] gi|225929759|gb|EEH25775.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei Pakistan 9] gi|238521637|gb|EEP85087.1| GTP-binding protein, EngB family [Burkholderia mallei GB8 horse 4] gi|243062565|gb|EES44751.1| GTP-binding protein, EngB family [Burkholderia mallei PRL-20] Length = 216 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 9/191 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 7 FFTTVNHLRDLPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSV 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL R L + L++D R Sbjct: 67 GPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA----HPEVI 189 + ++D+ + + +LTK DKL+ + L T+ + Y A V Sbjct: 122 LTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGYAGKLTVQ 181 Query: 190 PTSSVKRKGIE 200 S++KR G++ Sbjct: 182 LFSALKRTGLD 192 >gi|225175196|ref|ZP_03729192.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1] gi|225169372|gb|EEG78170.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1] Length = 197 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 9/146 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKS+L+N LVNRK LA TS PG+T+ +NFF+ + A Sbjct: 24 PEVAFVGRSNVGKSTLLNSLVNRKKLALTSGNPGKTRLINFFLINE---------AFYFA 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+AR + WG LI YL R TL+ V L+D RH D ++ +L Sbjct: 75 DLPGYGFARVSHEMKKQWGLLIENYLQTRETLQVVAQLVDLRHPPTADDLAMYQWLIHFN 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTK 175 + IV TK DK+S Q+ +++ + Sbjct: 135 IPTIIVATKADKISRGNRQKHVKQVR 160 >gi|56476001|ref|YP_157590.1| ribosome biogenesis GTP-binding protein YsxC [Aromatoleum aromaticum EbN1] gi|81598986|sp|Q5P7M2|ENGB_AROAE RecName: Full=Probable GTP-binding protein EngB gi|56312044|emb|CAI06689.1| GTP-binding protein [Aromatoleum aromaticum EbN1] Length = 216 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 14/181 (7%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G LP EIAF+GRSN GKSS IN L + LA S PGRTQ +NFF + Sbjct: 17 GALPPPEGAEIAFAGRSNAGKSSAINTLADHTRLAFVSKTPGRTQLINFF--------RL 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + A+ LVD+PGYGYA+ P+ W GL+ YL +R L + L++D RH + +D+ + Sbjct: 69 DCGAV-LVDLPGYGYAKVPENIRRQWQGLLEHYLRKRENLIGLVLIMDSRHPLTPLDRQM 127 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT--SSVKRKGI 199 + ++LTK DKLS A TL + R P++ SS+K+ G+ Sbjct: 128 IDWFVPGGRPIHVLLTKCDKLSRNEAAATLASVR---REVAALGPQISVQLFSSLKKIGM 184 Query: 200 E 200 E Sbjct: 185 E 185 >gi|260170500|ref|ZP_05756912.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D2] gi|315918844|ref|ZP_07915084.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692719|gb|EFS29554.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 201 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/139 (43%), Positives = 83/139 (59%), Gaps = 11/139 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P PE AF GRSNVGKSSLIN+L NRK LA TS PG+T +N FF+ K++ Sbjct: 19 PAGIFPEYAFIGRSNVGKSSLINMLTNRKGLAMTSATPGKTMLINHFFINKNW------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYAR +K D +I Y+ ER + +++LID R ++ID + Sbjct: 72 ---YLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFME 128 Query: 144 FLDKKAVSYQIVLTKIDKL 162 +L + + + I+ TK DKL Sbjct: 129 WLGENGIPFSIIFTKADKL 147 >gi|254300607|ref|ZP_04968052.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 406e] gi|157810607|gb|EDO87777.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 406e] Length = 228 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 86/168 (51%), Gaps = 5/168 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 19 FFTTVNHLRDLPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSV 78 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL R L + L++D R Sbjct: 79 GPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRP 133 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + ++D+ + + +LTK DKL+ + L T+ + Y Sbjct: 134 LTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAY 181 >gi|325274002|ref|ZP_08140160.1| GTP-binding protein YsxC [Pseudomonas sp. TJI-51] gi|324100855|gb|EGB98543.1| GTP-binding protein YsxC [Pseudomonas sp. TJI-51] Length = 210 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/170 (38%), Positives = 89/170 (52%), Gaps = 10/170 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF D L VD Sbjct: 33 EVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFSLDDERRL---------VD 82 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P W + YL R LR + L++D RH + D+ + + + Sbjct: 83 LPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRGIILMMDVRHPMTDFDKMMLDWAKASGM 142 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 I+LTK DKL+ + TL K + IR + S+ KR G+E Sbjct: 143 PMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQLFSAPKRLGVE 192 >gi|253997962|ref|YP_003050025.1| ribosome biogenesis GTP-binding protein YsxC [Methylovorus sp. SIP3-4] gi|313200029|ref|YP_004038687.1| GTP-binding protein hsr1-like protein [Methylovorus sp. MP688] gi|253984641|gb|ACT49498.1| GTP-binding protein HSR1-related [Methylovorus sp. SIP3-4] gi|312439345|gb|ADQ83451.1| GTP-binding protein HSR1-related protein [Methylovorus sp. MP688] Length = 212 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/176 (36%), Positives = 95/176 (53%), Gaps = 10/176 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N + N LA S PGRTQ +NFF +L + LVD Sbjct: 26 EVAFAGRSNAGKSSALNTMANHNRLAFVSKQPGRTQLINFF------SLGGD---RFLVD 76 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P+ W + YLS RS+L + L++D RH + +D+ + + Sbjct: 77 LPGYGYAKVPESMRKHWQMTLSNYLSHRSSLYGLVLVMDSRHPLTPLDRQMLDWFGPSGK 136 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++LTK DKLS + A TL + + N + V SS+K++G+E I Sbjct: 137 PIHVLLTKSDKLSRSAAMLTLNAVRKEL-NTTWGNCSVQLFSSLKKQGVEEAEAVI 191 >gi|291286241|ref|YP_003503057.1| ribosome biogenesis GTP-binding protein YsxC [Denitrovibrio acetiphilus DSM 12809] gi|290883401|gb|ADD67101.1| ribosome biogenesis GTP-binding protein YsxC [Denitrovibrio acetiphilus DSM 12809] Length = 190 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 98/195 (50%), Gaps = 12/195 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E P+ PEIAF+GRSNVGKSS+IN L+ K L + PG+T+ +NFF+ Sbjct: 5 FITSAKEPKGYPETEFPEIAFAGRSNVGKSSMINTLLGTKKLVKVGKTPGKTRLVNFFLV 64 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+A+ K WG I Y +ER+ L L++D R Sbjct: 65 SD---------RIMLVDLPGYGFAKVSKAEKAQWGETIENYFTERTQLSACVLILDIRRD 115 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + +L V I LTK DKLS L K + N P + + SS Sbjct: 116 PNEDDLGMLYWLQHYNVKALIALTKCDKLSNNQQISRLAKISKQL-NMP--REDFLIFSS 172 Query: 194 VKRKGIEVLRKAILE 208 + +KG E + + I E Sbjct: 173 LSKKGKEDVWEKIEE 187 >gi|269103719|ref|ZP_06156416.1| GTP-binding protein EngB [Photobacterium damselae subsp. damselae CIP 102761] gi|268163617|gb|EEZ42113.1| GTP-binding protein EngB [Photobacterium damselae subsp. damselae CIP 102761] Length = 221 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 103/190 (54%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + +K+LARTS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPQDSGVEIAFAGRSNAGKSSALNRITEQKSLARTSKTPGRTQLINMFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N L+D+PGYG+A+ P + W + YL +R L + +L+D RH Sbjct: 72 ESGCN---------LIDLPGYGFAQVPLEMKIKWQKSLGEYLQKRECLAGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL + + K + + + +V SS Sbjct: 123 LKDLDQQMIYWGVESGLPVLVLLTKADKLKSGARKAQVLKVRKDLADV-AGDVQVEAFSS 181 Query: 194 VKRKGIEVLR 203 +K G++ +R Sbjct: 182 LKGIGVDQVR 191 >gi|120556475|ref|YP_960826.1| GTP-binding protein, HSR1-related [Marinobacter aquaeolei VT8] gi|120326324|gb|ABM20639.1| cell division checkpoint GTPase YihA [Marinobacter aquaeolei VT8] Length = 214 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P E+AF+GRSN GKSS +N + LARTS PGRT+ +NFF Sbjct: 17 FLISASKLDECPPDHGAEVAFAGRSNAGKSSALNAITANGKLARTSKTPGRTRLINFFSL 76 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N LVD+PGYGYA+ + D W + YL++R LR + L++D RH Sbjct: 77 --------NREHARLVDLPGYGYAKVSRDMKDDWQQHLGHYLNDRRCLRGLVLVMDIRHP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + DQ + + + + I+ TK DKL A+ + ++ Y +I S+ Sbjct: 129 LTDFDQMMVEWCEHNHLPLMILATKADKLKFGQAKTAMLGIAKKLKEYQCV-EHLIMFSA 187 Query: 194 VKRKGIEVLRKAI 206 ++G++ R+A+ Sbjct: 188 TSKRGVDECREAL 200 >gi|156095574|ref|XP_001613822.1| GTP-binding protein [Plasmodium vivax SaI-1] gi|148802696|gb|EDL44095.1| GTP-binding protein, putative [Plasmodium vivax] Length = 288 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 9/152 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A GRSNVGKSSLIN L+N + +A+ S PGRT+HL F NL N+L ++V Sbjct: 84 PQVAIFGRSNVGKSSLINALLNNREVAQASKTPGRTRHLFIF------NLLNHL---SIV 134 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ K D W LI YL+ L+ LI+C D + L K Sbjct: 135 DLPGYGFAKVAKHMRDDWSVLIEEYLNRAVNLKRALCLIECTEFFTPHDFVLLDMLITKG 194 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V +QIV+TK+D+L + + K +I +Y Sbjct: 195 VPFQIVVTKVDRLRAHELHKLMVKVLSVIEDY 226 >gi|24376139|ref|NP_720182.1| GTPase EngB [Shewanella oneidensis MR-1] gi|81588968|sp|Q8E8J7|ENGB_SHEON RecName: Full=Probable GTP-binding protein EngB gi|24351179|gb|AAN57626.1|AE015898_9 GTP-binding protein EngB [Shewanella oneidensis MR-1] Length = 219 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/184 (36%), Positives = 97/184 (52%), Gaps = 17/184 (9%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLART 58 SH F ++ FL P+I L + P EIAF+GRSN GKSS +N L +KNLART Sbjct: 4 SHIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKNLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PGRTQ +N F L A LVD+PGYG+A+ P W + YL + Sbjct: 62 SKTPGRTQLINVF----------ELDAQRRLVDLPGYGFAQVPLAMKMKWQQSLAEYLQK 111 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 R+ L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + Sbjct: 112 RACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRKA 171 Query: 178 IRNY 181 + + Sbjct: 172 LAEF 175 >gi|88798525|ref|ZP_01114109.1| predicted GTPase [Reinekea sp. MED297] gi|88778625|gb|EAR09816.1| predicted GTPase [Reinekea sp. MED297] Length = 207 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 102/194 (52%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + P E+AF+GRSN GKSS +N L LARTS PGRTQ LNFF Sbjct: 10 FLTSAAKFSQCPTDTGAEVAFAGRSNAGKSSALNALTRNSKLARTSKTPGRTQLLNFFT- 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 S+ ++ L VD+PGYGYA+ + W I YL+ER +LR + L++D RH Sbjct: 69 --LSSDEHRL-----VDLPGYGYAKVNRNMKQDWEEHIGEYLAERLSLRGLVLVMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-YPTAHPEVIPTS 192 + + DQ + + + + +LTK DKL A+ T K + ++ P ++ S Sbjct: 122 MTEFDQMIIDWAVETEMPLLALLTKADKLKRGPAKSTWLKVRNQLQTRAPWLDAQMF--S 179 Query: 193 SVKRKGIEVLRKAI 206 ++K+ G+ L + + Sbjct: 180 ALKKDGVSDLTRWL 193 >gi|167762858|ref|ZP_02434985.1| hypothetical protein BACSTE_01221 [Bacteroides stercoris ATCC 43183] gi|167699198|gb|EDS15777.1| hypothetical protein BACSTE_01221 [Bacteroides stercoris ATCC 43183] Length = 202 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 96/188 (51%), Gaps = 12/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F + K++ Sbjct: 19 PGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLINKNW------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +VD+PGYGYA+ +K + +I Y+ +R + C+++L+D RH + ID Sbjct: 72 ---YIVDLPGYGYAKRGQKGQEQIQRIIETYILQREQMTCLFVLVDSRHEPQAIDLAFIE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + V + IV TK DKL + +R P TSS R G + L Sbjct: 129 WLGENGVPFAIVFTKADKLKGGRINSNIRHYLEKLREQWEELPPHFITSSENRMGRDELL 188 Query: 204 KAILETIN 211 I E IN Sbjct: 189 GYI-EQIN 195 >gi|126664648|ref|ZP_01735632.1| predicted GTPase [Marinobacter sp. ELB17] gi|126630974|gb|EBA01588.1| predicted GTPase [Marinobacter sp. ELB17] Length = 213 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N + LARTS PGRT+ +NFF Sbjct: 17 FMVSASKLNECPADIGAEVAFAGRSNAGKSSALNTITVNGKLARTSKTPGRTRLINFFSL 76 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N LVD+PGYGYAR + D W + YL++R LR + L++D RH Sbjct: 77 --------NRENARLVDLPGYGYARVSRDMKDDWQTHLGHYLNDRRCLRGLVLVMDIRHP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + DQ + + + I+ TK DKL A+ + + + + +I SS Sbjct: 129 LTEFDQTMVQWCQHNTMPLMILATKSDKLKFGQAKTAMLGIRQKLNEFSCVQ-HLIMFSS 187 Query: 194 VKRKGIEVLRKAILE 208 + G++ R+A+ + Sbjct: 188 SNKTGLDECRQALTQ 202 >gi|270294150|ref|ZP_06200352.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D20] gi|270275617|gb|EFA21477.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D20] Length = 202 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/190 (38%), Positives = 99/190 (52%), Gaps = 21/190 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ Sbjct: 19 PAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLINK--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +VD+PGYGYA+ +K + +I Y+ +R + C+++LID R + ID + + Sbjct: 70 SWYIVDLPGYGYAKRGQKGQEQIKRIIESYILQREQMTCLFVLIDSRLAPQAIDLEFTEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSP----TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L + V + IV TK DKL T E LE+ K P P I TSS R G Sbjct: 130 LGENGVPFAIVFTKADKLKGGRLNTHINEYLEQLKEQWEELP---PYFI-TSSENRMG-- 183 Query: 201 VLRKAILETI 210 RK +L+ I Sbjct: 184 --RKELLDYI 191 >gi|119369237|sp|Q4FV29|ENGB_PSYA2 RecName: Full=Probable GTP-binding protein EngB Length = 232 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 9/185 (4%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P L P E+AF+GRSN GKSS IN L N++ LAR+S PGRTQ +NFF D Sbjct: 3 APTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQMINFFNVGDAD 62 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P + W + YL RS+L + L+ D RH +K Sbjct: 63 R--------RLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMTDIRHPLKFF 114 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + + + I+LTK DKL ++ L T+ ++ + + S+++++ Sbjct: 115 DEQMLRWAKDGELPVHILLTKADKLKYGASKNALLNTRKRLKQLGL-NCSIQLFSALRKE 173 Query: 198 GIEVL 202 G++ L Sbjct: 174 GLDEL 178 >gi|256850971|ref|ZP_05556360.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 27-2-CHN] gi|260661185|ref|ZP_05862099.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 115-3-CHN] gi|282934114|ref|ZP_06339392.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 208-1] gi|256616033|gb|EEU21221.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 27-2-CHN] gi|260548122|gb|EEX24098.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 115-3-CHN] gi|281301728|gb|EFA93994.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 208-1] Length = 196 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 62/141 (43%), Positives = 85/141 (60%), Gaps = 9/141 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIA +GRSNVGKSSLIN +NRKNLARTS+ PG+TQ LNF+ NN Sbjct: 19 PRDILPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQTLNFYKV-------NN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR K + +G +I YL R L + ++ID RH D ++++ Sbjct: 70 SFYLVDVPGYGYARVSKAQREQFGEMIQDYLETRGNLEGLIIIIDARHEPTVDDIAMYNY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPT 165 + +V TK+DK+ + Sbjct: 130 ALLLDLPILVVATKMDKIKKS 150 >gi|313159636|gb|EFR58994.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes sp. HGB5] Length = 197 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 9/191 (4%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 I +PK +IAF GRSNVGKSSLIN+L R+ LA+ S PG+T+ +N F+ + Sbjct: 15 ISQVPKDALKDIAFIGRSNVGKSSLINMLTGRQGLAKVSGTPGKTRLINHFLIDN----- 69 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 A LVD+PGYGYAR K + +I Y+ + + +++L D R ++ID Sbjct: 70 ----AWYLVDLPGYGYARTSKTKRSEFSKIITDYVLKCEKMHFLFVLADLRLEPQKIDLQ 125 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L + + ++ TK DKLS T ++++E+ + + P + +SS G E Sbjct: 126 FIEMLGMNGIPFAVIFTKADKLSKTQREKSVERYRAALAEQWEELPRMFVSSSQHGTGRE 185 Query: 201 VLRKAILETIN 211 + I E +N Sbjct: 186 EILGFIGECLN 196 >gi|24212844|ref|NP_710325.1| ribosome biogenesis GTP-binding protein YsxC [Leptospira interrogans serovar Lai str. 56601] gi|45656040|ref|YP_000126.1| ribosome biogenesis GTP-binding protein YsxC [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|67460340|sp|Q72W11|ENGB_LEPIC RecName: Full=Probable GTP-binding protein EngB gi|67460409|sp|Q8F9P7|ENGB_LEPIN RecName: Full=Probable GTP-binding protein EngB gi|24193501|gb|AAN47343.1| GTPase EngB [Leptospira interrogans serovar Lai str. 56601] gi|45599273|gb|AAS68763.1| GTP binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 217 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 114/190 (60%), Gaps = 14/190 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P G P+IAF+GRSN GKSSL+N ++ RK+LA+ S+ PG+T+ LNFF F N Sbjct: 28 IPSQGTPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFF----FVN----- 78 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++ LVD+PG+GY+ K+ ++ GL++ YL+ L+C++L+ D + + + + ++ Sbjct: 79 HSIYLVDLPGFGYSANSHKDHEAMMGLLMDYLNLAKDLKCLFLVCDSQRELPEEELELIG 138 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + +V TKIDKL+ + + +K K + YP E + S+ KG+ LR Sbjct: 139 TCFERNIKPVLVRTKIDKLNQSDLSKLRKKMKNIHELYPML--ETVLVSNKSGKGLPELR 196 Query: 204 K---AILETI 210 K +++ET+ Sbjct: 197 KIVYSLIETV 206 >gi|288574914|ref|ZP_06393271.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570655|gb|EFC92212.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 203 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 13/191 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P+ PEIA +GRSNVGKSSL+N L+++K +A S+ PG+T+ +NFF + + Sbjct: 18 FPEPKFPEIALAGRSNVGKSSLLNALIDQK-IAHISSKPGKTRSINFF------EVASGG 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYG+A KK D W LI +Y+S R L V L+D RHG+ + D ++ Sbjct: 71 SPFTLVDLPGYGFASRSKKEQDQWRKLIEKYVSSRQNLSLVIHLVDFRHGLLKNDVELQE 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ V V TK+DK++ + L KY+ + ++ TS+ + GI+ LR Sbjct: 131 WISALGVPMLTVFTKVDKIARGKRKGELH--KYIKSGLKSVDVPIL-TSTEGKLGIDELR 187 Query: 204 ---KAILETIN 211 A LE N Sbjct: 188 TFISAYLEEWN 198 >gi|126172308|ref|YP_001048457.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS155] gi|153002842|ref|YP_001368523.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS185] gi|160877587|ref|YP_001556903.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS195] gi|217975429|ref|YP_002360180.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS223] gi|304411972|ref|ZP_07393582.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS183] gi|307305867|ref|ZP_07585613.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica BA175] gi|166225979|sp|A3CYM5|ENGB_SHEB5 RecName: Full=Probable GTP-binding protein EngB gi|166225980|sp|A6WUH1|ENGB_SHEB8 RecName: Full=Probable GTP-binding protein EngB gi|189037188|sp|A9KWY5|ENGB_SHEB9 RecName: Full=Probable GTP-binding protein EngB gi|254783208|sp|B8EDT1|ENGB_SHEB2 RecName: Full=Probable GTP-binding protein EngB gi|125995513|gb|ABN59588.1| cell division checkpoint GTPase YihA [Shewanella baltica OS155] gi|151367460|gb|ABS10460.1| GTP-binding protein HSR1-related [Shewanella baltica OS185] gi|160863109|gb|ABX51643.1| GTP-binding protein HSR1-related [Shewanella baltica OS195] gi|217500564|gb|ACK48757.1| GTP-binding protein HSR1-related [Shewanella baltica OS223] gi|304349522|gb|EFM13930.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS183] gi|306911360|gb|EFN41786.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica BA175] gi|315269785|gb|ADT96638.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS678] Length = 219 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 16/190 (8%) Query: 14 FLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I L + P EIAF+GRSN GKSS +N L +K+LARTS PGRTQ +N Sbjct: 13 FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLARTSKTPGRTQLIN 72 Query: 70 FFVPKDFSNLKNNLPAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 F L A LVD+PGYG+A+ P + W + YL +R+ L V +L+ Sbjct: 73 VF----------ELDAQRRLVDLPGYGFAQVPLALKNKWQQALGEYLQKRACLSGVVVLM 122 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D RH +K +D + + + +LTK DKL+ + +T+ + + + + +V Sbjct: 123 DIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRLALSEFGD-WVQV 181 Query: 189 IPTSSVKRKG 198 P SS+K G Sbjct: 182 EPFSSLKGTG 191 >gi|312134775|ref|YP_004002113.1| ribosome biogenesis gtp-binding protein ysxc [Caldicellulosiruptor owensensis OL] gi|311774826|gb|ADQ04313.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor owensensis OL] Length = 204 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 78/134 (58%), Gaps = 10/134 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ GRSNVGKSS IN + K LA+ + PG+T+ +NFF N+ N +V Sbjct: 26 PEMCICGRSNVGKSSFINAVFKDK-LAKVGSTPGKTRTINFF------NIDNKF---RVV 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA K+ W +I YL ER L+ LL+D RH + D+ + SF DKK Sbjct: 76 DLPGYGYAEVSKEEKRRWKKMIEEYLLERQELKLSVLLLDSRHLPTEDDKIMLSFFDKKE 135 Query: 150 VSYQIVLTKIDKLS 163 + IVLTK DKLS Sbjct: 136 IPIMIVLTKCDKLS 149 >gi|160915950|ref|ZP_02078158.1| hypothetical protein EUBDOL_01975 [Eubacterium dolichum DSM 3991] gi|158432426|gb|EDP10715.1| hypothetical protein EUBDOL_01975 [Eubacterium dolichum DSM 3991] Length = 196 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/186 (36%), Positives = 98/186 (52%), Gaps = 15/186 (8%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 P+ P + PEI +GRSNVGKSS IN + NRK LA N+PG+T+ LNFF Sbjct: 12 SAPDKKSWPDSDLPEIVLAGRSNVGKSSFINAMCNRKKLAYVGNSPGKTRLLNFF----- 66 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 NL + VD+PGYGYA+ K + +G ++ Y SERS + + L++D RH Sbjct: 67 -NLDDKY---MFVDVPGYGYAKISKAQLIKFGQMMEDYFSERSQKKGLVLIVDARHKPTD 122 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSV 194 D + F + +V TK+DKL + + L+ LIR + ++ P SS Sbjct: 123 DDITMIEFARYYEIPVCVVATKMDKLKSSQRHKQLK----LIRQTLELSEDEKLFPFSSE 178 Query: 195 KRKGIE 200 ++GI+ Sbjct: 179 TKQGID 184 >gi|313682551|ref|YP_004060289.1| ribosome biogenesis GTP-binding protein ysxc [Sulfuricurvum kujiense DSM 16994] gi|313155411|gb|ADR34089.1| ribosome biogenesis GTP-binding protein YsxC [Sulfuricurvum kujiense DSM 16994] Length = 203 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 15/193 (7%) Query: 14 FLRGVPEIGLLPKAG-PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ P I L P+ E+AF RSN GKSSL+N L RK+LA+ S PG+T+ +N+F Sbjct: 9 FVTSAPNIRLTPENEYQNEVAFMARSNTGKSSLLNTLTKRKSLAKVSATPGKTRLINYFD 68 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 N + VD+PG+GYA+ K W + +++ER +R LIDCRH Sbjct: 69 VVFADRETNERLSAKFVDLPGFGYAKVAKSLKTDWESNLTGFIAERKQIRIFVHLIDCRH 128 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID+ V ++L + Q+++ TKIDKL+ E L + +P A I Sbjct: 129 PDLEIDRSVDAYLHEICSPDQVIVTIFTKIDKLNQKELSE-------LKKRFPGA----I 177 Query: 190 PTSSVKRKGIEVL 202 S+ KR+G++ + Sbjct: 178 MVSNTKRRGVDAI 190 >gi|296004532|ref|XP_002808687.1| GTP binding protein, putative [Plasmodium falciparum 3D7] gi|225631672|emb|CAX63958.1| GTP binding protein, putative [Plasmodium falciparum 3D7] Length = 286 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 86/155 (55%), Gaps = 9/155 (5%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A P+IA GRSNVGKSSLIN L+N + +++ SN PGRT+HL F N L + Sbjct: 74 ANIPQIAIFGRSNVGKSSLINALLNYREVSQASNTPGRTRHLFIF---------NLLNYL 124 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++VD+PGYGYA+ K+ ++W LI YL+ L+ LI+ D + L Sbjct: 125 SIVDLPGYGYAKVSKELRNNWSILIEEYLNRAKNLKRALCLIESTESFSTYDFILLDMLI 184 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 K + +QI++TKIDKL + K +I NY Sbjct: 185 TKNIPFQIIITKIDKLKVNELHNLMIKILSVIDNY 219 >gi|328676015|gb|AEB28690.1| GTP-binding protein EngB [Francisella cf. novicida 3523] Length = 197 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 9/150 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ +N F Sbjct: 8 YIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQLINLF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + K LVD+PGYGYA+ + W + YL+ R L + LL+D RH Sbjct: 66 -DLGDNKR------LVDLPGYGYAKVSETIKRQWQSEMENYLTSRKCLNGIVLLVDSRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K+ D + ++ I+LTK DKL+ Sbjct: 119 LKEFDSLMIEMAISFGLNLHILLTKADKLN 148 >gi|317478908|ref|ZP_07938055.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 4_1_36] gi|316904885|gb|EFV26692.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 4_1_36] Length = 219 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 74/190 (38%), Positives = 99/190 (52%), Gaps = 21/190 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ Sbjct: 36 PTGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLINK--------- 86 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +VD+PGYGYA+ +K + +I Y+ +R + C+++LID R + ID + + Sbjct: 87 SWYIVDLPGYGYAKRGQKGQEQIKRIIESYILQREQMTCLFVLIDSRLAPQAIDLEFTEW 146 Query: 145 LDKKAVSYQIVLTKIDKLSP----TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L + V + IV TK DKL T E LE+ K P P I TSS R G Sbjct: 147 LGENGVPFAIVFTKADKLKGGRLNTHINEYLEQLKEQWEELP---PYFI-TSSENRMG-- 200 Query: 201 VLRKAILETI 210 RK +L+ I Sbjct: 201 --RKELLDYI 208 >gi|170724261|ref|YP_001751949.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas putida W619] gi|229463764|sp|B1JFJ3|ENGB_PSEPW RecName: Full=Probable GTP-binding protein EngB gi|169762264|gb|ACA75580.1| small GTP-binding protein [Pseudomonas putida W619] Length = 210 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/176 (38%), Positives = 91/176 (51%), Gaps = 10/176 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF D L VD Sbjct: 33 EVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFSLDDERRL---------VD 82 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P W + YL R LR V L++D RH + D+ + + + Sbjct: 83 LPGYGYAKVPIPLKQHWQRHLEAYLGSRECLRGVILMMDVRHPMTDFDKMMLDWARASGM 142 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I+LTK DKL+ + TL K + IR + S+ KR G+E K + Sbjct: 143 PMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQLFSAPKRLGLEEAYKVL 198 >gi|254448947|ref|ZP_05062402.1| GTP-binding protein [gamma proteobacterium HTCC5015] gi|198261484|gb|EDY85774.1| GTP-binding protein [gamma proteobacterium HTCC5015] Length = 209 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 10/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ I LP EIAF+GRSN GKSS IN + ++ LA+ S PGRTQ +NFF Sbjct: 19 YVHSAHNIDQLPPERGLEIAFAGRSNAGKSSAINAITHQNRLAKVSKTPGRTQMINFFAL 78 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + ++ VD+PGYG+A+ P + W + RYL+ R TL + +++D RH Sbjct: 79 DEDRHI---------VDLPGYGFAKVPLSVKNHWVETLERYLAARQTLVALVIVMDIRHP 129 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +++ D + + + ++LTK DKL A + L + + + + S+ Sbjct: 130 LREQDWQMIQWAQSSRIELHLLLTKADKLKRGAANQQLFAVQKAL-SEAGVEASLQTFSA 188 Query: 194 VKRKGIEVLRKAILETINY 212 KR+GI+ + + E Y Sbjct: 189 TKREGIDDIHGLMDEWFKY 207 >gi|313897653|ref|ZP_07831195.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. HGF2] gi|312957605|gb|EFR39231.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. HGF2] Length = 196 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 92/182 (50%), Gaps = 11/182 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P+ P PEI +GRSNVGKSS IN + RK LA N PG+T+ LNFF N Sbjct: 14 PDKKSWPDTTLPEIVLAGRSNVGKSSFINAMCGRKKLAYVGNTPGKTRLLNFF------N 67 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 L + VD+PGYGYA K + +G ++ Y SER+ + V +L+D RH D Sbjct: 68 LDDKY---MFVDVPGYGYANISKTQLIKFGQMMEDYFSERTQKKGVVILVDARHKPTDDD 124 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F + +V TK DK+ PT + ++ A + P S+V+++G Sbjct: 125 MTMLEFARYYEIPVAVVATKCDKVPPTKRAHHFANIRKTLK--LNADEPLFPFSAVEKQG 182 Query: 199 IE 200 +E Sbjct: 183 ME 184 >gi|150016213|ref|YP_001308467.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium beijerinckii NCIMB 8052] gi|189037172|sp|A6LT31|ENGB_CLOB8 RecName: Full=Probable GTP-binding protein EngB gi|149902678|gb|ABR33511.1| GTP-binding protein, HSR1-related [Clostridium beijerinckii NCIMB 8052] Length = 198 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 77/133 (57%), Gaps = 9/133 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF GRSNVGKSSLIN L NRK LA+ S PG+T+ +NFF+ D LVD Sbjct: 25 EVAFVGRSNVGKSSLINSLTNRKKLAKVSQTPGKTRLVNFFLIND---------DFYLVD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ K DSWG + YL+ R L+ V LL+D RH D + ++ Sbjct: 76 LPGYGYAKVSKAEKDSWGKTVEMYLTGREQLKRVVLLVDSRHKPTGDDIIMHEWIKHFGY 135 Query: 151 SYQIVLTKIDKLS 163 +V TK DKL+ Sbjct: 136 DVIVVATKSDKLT 148 >gi|124265624|ref|YP_001019628.1| ribosome biogenesis GTP-binding protein YsxC [Methylibium petroleiphilum PM1] gi|124258399|gb|ABM93393.1| putative GTP-binding cell division protein EngB [Methylibium petroleiphilum PM1] Length = 233 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 102/201 (50%), Gaps = 19/201 (9%) Query: 11 AWI----FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 AW FL + LP PEIAF GRSN GKS+ IN+L +K LA S PGRTQ Sbjct: 17 AWTHTARFLTTAARMEHLPVNELPEIAFVGRSNAGKSTAINLLTQQKRLAFASKTPGRTQ 76 Query: 67 HLNFFV--PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 H+N F PKD P D+PGYGYA + W ++ YL R +L V Sbjct: 77 HINLFSLGPKD-------APDALFADLPGYGYAAVARGAKLRWQQVMAEYLETRRSLSGV 129 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQI----VLTKIDKLSPTTAQETLEKTKYLIRN 180 L++D R G ++DQ + +F+ + + +I +LTK DKL+ A L + ++R Sbjct: 130 VLMVDSRLGFTELDQQLLAFVAPRVGTGEIKLLVLLTKADKLNRREADAALAAAQGVLRQ 189 Query: 181 YPT--AHPEVIPTSSVKRKGI 199 T A + S++ R+G+ Sbjct: 190 LATDDADLSLALFSALSRRGV 210 >gi|113972233|ref|YP_736026.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella sp. MR-4] gi|117922541|ref|YP_871733.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella sp. ANA-3] gi|119369254|sp|Q0HD98|ENGB_SHESM RecName: Full=Probable GTP-binding protein EngB gi|166225983|sp|A0L2Q8|ENGB_SHESA RecName: Full=Probable GTP-binding protein EngB gi|113886917|gb|ABI40969.1| cell division checkpoint GTPase YihA [Shewanella sp. MR-4] gi|117614873|gb|ABK50327.1| cell division checkpoint GTPase YihA [Shewanella sp. ANA-3] Length = 219 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 105/201 (52%), Gaps = 18/201 (8%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLART 58 SH F ++ FL P+I L + P EIAF+GRSN GKSS +N L +KNLART Sbjct: 4 SHIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKNLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAM-ALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PGRTQ +N F L A LVD+PGYG+A+ P W + YL + Sbjct: 62 SKTPGRTQLINVF----------ELDAQRRLVDLPGYGFAQVPLAMKLKWQQSLGEYLQK 111 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 R+ L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + Sbjct: 112 RACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRKA 171 Query: 178 IRNYPTAHPEVIPTSSVKRKG 198 + + +V P S++K G Sbjct: 172 LVEFGD-WVQVEPFSALKGTG 191 >gi|114049482|ref|YP_740032.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella sp. MR-7] gi|119369255|sp|Q0HPI0|ENGB_SHESR RecName: Full=Probable GTP-binding protein EngB gi|113890924|gb|ABI44975.1| cell division checkpoint GTPase YihA [Shewanella sp. MR-7] Length = 219 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 105/201 (52%), Gaps = 18/201 (8%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLART 58 SH F ++ FL P+I L + P EIAF+GRSN GKSS +N L +KNLART Sbjct: 4 SHIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKNLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAM-ALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PGRTQ +N F L A LVD+PGYG+A+ P W + YL + Sbjct: 62 SKTPGRTQLINVF----------ELDAQRRLVDLPGYGFAQVPLAMKLKWQQSLGEYLQK 111 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 R+ L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + Sbjct: 112 RACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRKA 171 Query: 178 IRNYPTAHPEVIPTSSVKRKG 198 + + +V P S++K G Sbjct: 172 LVEFGD-WVQVEPFSALKGTG 191 >gi|319761545|ref|YP_004125482.1| ribosome biogenesis gtp-binding protein ysxc [Alicycliphilus denitrificans BC] gi|317116106|gb|ADU98594.1| ribosome biogenesis GTP-binding protein YsxC [Alicycliphilus denitrificans BC] Length = 230 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 15/191 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LP PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N F Sbjct: 27 FLTTAAQLSQLPAITVPEIAFVGRSNAGKSTCINTLTQQRQLAFASKKPGRTQHINLFAL 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K L D+PGYGYA + + W ++ YL R L + LL D R G Sbjct: 87 G-----KQGATDAVLADLPGYGYAAVSRSDKQRWQQVMANYLVSRQGLTGIVLLCDPRLG 141 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVI 189 + ++D+ + + ++ + + ++LTK DKL+ E+ K L I EV Sbjct: 142 LTELDEALLEVVRPRVEQGLKFLVLLTKADKLT------RAEQAKALSIARLQAGGGEVR 195 Query: 190 PTSSVKRKGIE 200 S++KR+G++ Sbjct: 196 MFSALKRQGVD 206 >gi|312877977|ref|ZP_07737918.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor lactoaceticus 6A] gi|311795251|gb|EFR11639.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor lactoaceticus 6A] Length = 204 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 79/134 (58%), Gaps = 10/134 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ GRSNVGKSS IN + K LA+ + PG+T+ +NFF N+ N +V Sbjct: 26 PEMCICGRSNVGKSSFINAVFKDK-LAKVGSTPGKTRTINFF------NIDNKF---RVV 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA K+ W +I YL ER L+ LL+D RH + D+ + SF+DKK Sbjct: 76 DLPGYGYAEVSKEEKRRWRTMIEEYLLERQELKLSVLLLDSRHLPTEDDKIMLSFVDKKE 135 Query: 150 VSYQIVLTKIDKLS 163 + IVLTK DKLS Sbjct: 136 IPIMIVLTKCDKLS 149 >gi|149376397|ref|ZP_01894159.1| predicted GTPase [Marinobacter algicola DG893] gi|149359238|gb|EDM47700.1| predicted GTPase [Marinobacter algicola DG893] Length = 212 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 12/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + P E+AF+GRSN GKSS IN + LARTS PGRT+ +NFF Sbjct: 21 FLISASRLEECPPDHGSEVAFAGRSNAGKSSAINCITTNGKLARTSKTPGRTRLINFFSL 80 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N LVD+PGYGYA+ + D W + YL++R LR + L++D RH Sbjct: 81 --------NRENCRLVDLPGYGYAKVSRDMKDDWQQHLGHYLNDRRCLRGLVLVMDIRHP 132 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + DQ + + + + I+ TK DKL A+ + + + +I S+ Sbjct: 133 LTDFDQMMVEWCEHNNLPLMILATKADKLKFGQAKTAMMGISKKLEAFQCVE-HLIMFSA 191 Query: 194 VKRKGIEVLRKAI---LET 209 ++G++ R+A+ LET Sbjct: 192 TSKRGVDECREALTAWLET 210 >gi|94968624|ref|YP_590672.1| small GTP-binding protein [Candidatus Koribacter versatilis Ellin345] gi|119368786|sp|Q1IRA2|ENGB_ACIBL RecName: Full=Probable GTP-binding protein EngB gi|94550674|gb|ABF40598.1| Small GTP-binding protein [Candidatus Koribacter versatilis Ellin345] Length = 203 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 62/150 (41%), Positives = 84/150 (56%), Gaps = 4/150 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P AG PEIAF GRSNVGKSSLIN +V K +A+TS+ PGRTQ +NFF Sbjct: 7 FMLSAADARQFPAAGAPEIAFLGRSNVGKSSLINAIVGSK-IAKTSSTPGRTQTINFF-- 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P D+PGYGYAR PK+ W I YL ER TL ++D Sbjct: 64 -EIRRPGKPRPDWIFADLPGYGYARVPKELTAEWPKFIDPYLHERPTLALCVSIVDVSVP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 ++ D ++ ++L + +V TKID++S Sbjct: 123 PQKKDLELLNWLRHVGRPFVVVGTKIDRVS 152 >gi|225850861|ref|YP_002731095.1| ribosome biogenesis GTP-binding protein YsxC [Persephonella marina EX-H1] gi|225646661|gb|ACO04847.1| ribosome biogenesis GTP-binding protein YsxC [Persephonella marina EX-H1] Length = 203 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 102/187 (54%), Gaps = 18/187 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A GRSNVGKSSLIN + R N+A+ S++PG+T+ +NFF+ D Sbjct: 20 PQPKYPEVAVVGRSNVGKSSLINAIFKR-NIAKVSSSPGKTRLINFFLLND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 ++ VD+PGYGYA K W +I +Y R L V +L+D RH ++D + + Sbjct: 70 RISFVDLPGYGYAAVSKAERAKWKKMIEKYFQTRENLSLVIMLVDSRHPPTKLDIMMKEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN---YPTAHPEVIPTSSVKRKGIEV 201 L+ + Y +V TK DKL+ Q +TK +IR P P V TS+ + GI+ Sbjct: 130 LEDLGIPYIVVATKADKLN----QSEKARTKKVIRETLGLPKDFP-VFLTSAKEGTGIKE 184 Query: 202 LRKAILE 208 L +L+ Sbjct: 185 LMSYVLD 191 >gi|120596877|ref|YP_961451.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella sp. W3-18-1] gi|166225984|sp|A1RE02|ENGB_SHESW RecName: Full=Probable GTP-binding protein EngB gi|120556970|gb|ABM22897.1| cell division checkpoint GTPase YihA [Shewanella sp. W3-18-1] Length = 219 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 15/183 (8%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLART 58 SH F ++ FL P+I L + P EIAF+GRSN GKSS +N L +K+LART Sbjct: 4 SHIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F + + + LVD+PGYG+A+ P + W + YL +R Sbjct: 62 SKTPGRTQLINVF---ELDSQRR------LVDLPGYGFAQVPLAMKNKWQQALGEYLQKR 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + + Sbjct: 113 ACLSGVVVLMDIRHPLKDLDMQMIQWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRKAL 172 Query: 179 RNY 181 ++ Sbjct: 173 ADF 175 >gi|291513697|emb|CBK62907.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Alistipes shahii WAL 8301] Length = 198 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 9/190 (4%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 I +PK +IAF GRSNVGKSSLIN+L R LA+ S PG+T+ +N F D Sbjct: 15 ISQVPKDDLKDIAFIGRSNVGKSSLINMLTARTGLAKVSGTPGKTRLINHFRIND----- 69 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 A LVD+PGYGYAR K + LI Y+ + + +++L D R ++ID Sbjct: 70 ----AWYLVDLPGYGYARTSKTQRSEFSKLITDYVIKCEKMHFLFVLADIRLEPQKIDLR 125 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L + + + I+ TK DKLS T ++++E+ + + P + +SS K G E Sbjct: 126 FIEMLGENGIPFGIIFTKADKLSKTQREKSVERFRTALAQQWEELPPMFVSSSEKAVGRE 185 Query: 201 VLRKAILETI 210 + I E + Sbjct: 186 EILDFIGECL 195 >gi|152992813|ref|YP_001358534.1| GTP-binding protein [Sulfurovum sp. NBC37-1] gi|151424674|dbj|BAF72177.1| GTP-binding protein [Sulfurovum sp. NBC37-1] Length = 213 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 23/212 (10%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 V F KSA +PE E+ F GRSNVGKSS +N L RKNLA++S Sbjct: 6 VVEAAFIKSAQSIADSLPE-------DMSEVVFLGRSNVGKSSTLNSLTQRKNLAKSSAT 58 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG+TQ +NFF + N + + P + VD+PG+GYA+ K + W +V ++ R ++ Sbjct: 59 PGKTQLINFFETRYLYN-EESFP-VRFVDLPGFGYAKVSKSLKEVWQKNLVEFIEHRISI 116 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 R L D RH +ID DV +++ + Y V TKIDKL+ E+ K L Sbjct: 117 RLFIHLRDARHPHAKIDDDVEAYISEFIRPDQRYLTVFTKIDKLNQK------ERAK-LK 169 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 R +P + I S++K+ G + + IL TI Sbjct: 170 REFPGS----ITVSNLKKNGHDRVHYEILRTI 197 >gi|146294988|ref|YP_001185412.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella putrefaciens CN-32] gi|166225982|sp|A4YCD0|ENGB_SHEPC RecName: Full=Probable GTP-binding protein EngB gi|145566678|gb|ABP77613.1| cell division checkpoint GTPase YihA [Shewanella putrefaciens CN-32] gi|319424461|gb|ADV52535.1| cell division control GTP-binding protein, EngB [Shewanella putrefaciens 200] Length = 219 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 15/183 (8%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLART 58 SH F ++ FL P+I L + P EIAF+GRSN GKSS +N L +K+LART Sbjct: 4 SHIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F + + + LVD+PGYG+A+ P + W + YL +R Sbjct: 62 SKTPGRTQLINVF---ELDSQRR------LVDLPGYGFAQVPLAMKNKWQQALGEYLQKR 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + + Sbjct: 113 ACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRKAL 172 Query: 179 RNY 181 ++ Sbjct: 173 ADF 175 >gi|71278006|ref|YP_267050.1| ribosome biogenesis GTP-binding protein YsxC [Colwellia psychrerythraea 34H] gi|119369187|sp|Q48A63|ENGB_COLP3 RecName: Full=Probable GTP-binding protein EngB gi|71143746|gb|AAZ24219.1| putative GTP-binding protein [Colwellia psychrerythraea 34H] Length = 224 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 11/157 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 TK+A F P+I LP E+AF+GRSN GKSS +N L N++ LAR S PGRTQ Sbjct: 8 LTKAA--FTISAPDIRRLPADSGIEVAFAGRSNAGKSSALNTLTNQRGLARISKTPGRTQ 65 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F + L+D+PGYG+A+ P W + YL +R L+ + + Sbjct: 66 LINVFEVAENRR---------LIDLPGYGFAQVPLAMKKKWQKALGEYLEKRQCLKGLVV 116 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 L+D RH +K +D D+ + + +LTK DKLS Sbjct: 117 LMDIRHPLKDLDMDLIQWAADSDLPVLALLTKCDKLS 153 >gi|238021891|ref|ZP_04602317.1| hypothetical protein GCWU000324_01795 [Kingella oralis ATCC 51147] gi|237866505|gb|EEP67547.1| hypothetical protein GCWU000324_01795 [Kingella oralis ATCC 51147] Length = 284 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 71/196 (36%), Positives = 102/196 (52%), Gaps = 15/196 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L + LA S PGRTQH+NFF Sbjct: 79 FFTTVNHLKDLPDT-PAEIAFVGRSNAGKSSAINTLCSHVRLAYVSKTPGRTQHINFF-- 135 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +N N +VD+PGYGYA+ P+ W L+ YL R L + L++D RH Sbjct: 136 -ELAN--GNF----MVDLPGYGYAQVPEAVRAHWVKLLGDYLQTRKQLIGLVLIMDVRHP 188 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 +K +D + F I+L+K DKLS +TL + ++ P A + + Sbjct: 189 MKPLDIQMLDFFALTGRPVHILLSKADKLSKNEQIKTLAAVQKALK--PFAERQSVSVQL 246 Query: 192 -SSVKRKGIEVLRKAI 206 SS+K++G + + + + Sbjct: 247 FSSLKKQGTDEVNEVV 262 >gi|170289148|ref|YP_001739386.1| small GTP-binding protein [Thermotoga sp. RQ2] gi|238688853|sp|B1LBK5|ENGB_THESQ RecName: Full=Probable GTP-binding protein EngB gi|170176651|gb|ACB09703.1| small GTP-binding protein [Thermotoga sp. RQ2] Length = 195 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 16/187 (8%) Query: 20 EIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 +I P PP E+AF GRSNVGKSSL+N L NRK +A S PG+T+ +NF++ Sbjct: 10 KIARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-VAFVSKTPGKTRSINFYLVNS 68 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 VD+PGYGYA+ KK W L+ Y R +L+ V+LL+D R + Sbjct: 69 ---------KYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQ 119 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + ++ + + IVLTK+DK+ + + LE+ + + Y +IPTSSV Sbjct: 120 DSDFMMIEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSRY--GEYTIIPTSSVT 177 Query: 196 RKGIEVL 202 +GI L Sbjct: 178 GEGISEL 184 >gi|15644215|ref|NP_229266.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima MSB8] gi|13124246|sp|Q9X1H7|ENGB_THEMA RecName: Full=Probable GTP-binding protein EngB gi|4982031|gb|AAD36534.1|AE001797_14 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 195 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 98/182 (53%), Gaps = 16/182 (8%) Query: 25 PKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 P PP E+AF GRSNVGKSSL+N L NRK +A S PG+T+ +NF++ Sbjct: 15 PGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-IAFVSKTPGKTRSINFYLVNS----- 68 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 VD+PGYGYA+ KK W L+ Y R +L+ V+LL+D R + D Sbjct: 69 ----KYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLM 124 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + ++ + + IVLTK+DK+ + + LE+ + + Y +IPTSSV +GI Sbjct: 125 MVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKY--GEYTIIPTSSVTGEGIS 182 Query: 201 VL 202 L Sbjct: 183 EL 184 >gi|320530216|ref|ZP_08031286.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas artemidis F0399] gi|320137649|gb|EFW29561.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas artemidis F0399] Length = 207 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 9/212 (4%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + TK+ ++L P+ PE+AF GRSNVGKSSLIN L + LAR S+ Sbjct: 1 MQESVVVTKA--VYLSSAVRKDQYPEVRRPEVAFIGRSNVGKSSLINSLTRIRQLARVSS 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ +NF+ + ++ +VD+PGYGYA+A + + W I Y Sbjct: 59 KPGKTQTINFYELLLRIDGGEERHSVHIVDLPGYGYAKAARDSRKIWAKFIEEYFLTSEY 118 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V LL+D RH + D+++FS+L + +V TK DKL + + + R Sbjct: 119 LRFVCLLLDIRHLPMESDRNMFSWLIAHDIPVLVVATKADKLGKNARRTQIAAMR---RA 175 Query: 181 YPTAHPEVIPTSSVKRKG----IEVLRKAILE 208 ++P +S K +G ++V++ ++E Sbjct: 176 LGVPELTILPYASPKNEGRSELLDVMKDNLIE 207 >gi|149926600|ref|ZP_01914860.1| GTPase EngB [Limnobacter sp. MED105] gi|149824529|gb|EDM83745.1| GTPase EngB [Limnobacter sp. MED105] Length = 204 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 5/139 (3%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A PEI F+GRSN GKS+ IN L ++ LA S PGRTQ LNFF ++ P Sbjct: 5 PGASVPEIVFAGRSNAGKSTAINTLCKQRQLAYASKMPGRTQLLNFF-----HVIEQAEP 59 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYG+A+ + + W + YL+ER +L L++DCR G+ ++D + + Sbjct: 60 IARLVDLPGYGFAQLAQTSQSVWDKELGSYLAERPSLVGTVLIVDCRRGLLELDYALIKW 119 Query: 145 LDKKAVSYQIVLTKIDKLS 163 + + + I+L+K DK + Sbjct: 120 VGHRQLPVHILLSKADKFN 138 >gi|119369238|sp|Q1QE34|ENGB_PSYCK RecName: Full=Probable GTP-binding protein EngB Length = 227 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 9/185 (4%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P L P E+AF+GRSN GKSS IN L N++ LAR+S PGRTQ +NFF D Sbjct: 3 APTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQMINFFNVGDAD 62 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PGYGYA P + W + YL RS+L + L+ D RH +K Sbjct: 63 R--------RLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMSDIRHPLKFF 114 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + + + I+LTK DKL ++ L T+ ++ + + S+++++ Sbjct: 115 DEQMLRWAKDGELPVHILLTKADKLKYGASKNALLNTRKRLKELGL-NCSIQLFSALRKE 173 Query: 198 GIEVL 202 G++ L Sbjct: 174 GLDEL 178 >gi|330823414|ref|YP_004386717.1| GTP-binding protein engB [Alicycliphilus denitrificans K601] gi|329308786|gb|AEB83201.1| GTP-binding protein engB [Alicycliphilus denitrificans K601] Length = 230 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 15/191 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LP PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N F Sbjct: 27 FLTTAAQLNQLPAITVPEIAFVGRSNAGKSTCINTLTQQRQLAFASKKPGRTQHINLFAL 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K L D+PGYGYA + + W ++ YL R L + LL D R G Sbjct: 87 G-----KQGATDAVLADLPGYGYAAVSRSDKQRWQQVMANYLVSRQGLTGIVLLCDPRLG 141 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVI 189 + ++D+ + + ++ + + ++LTK DKL+ E+ K L I EV Sbjct: 142 LTELDEALLEVVRPRVEQGLKFLVLLTKADKLT------RAEQAKALSIARLQAGGGEVR 195 Query: 190 PTSSVKRKGIE 200 S++KR+G++ Sbjct: 196 MFSALKRQGVD 206 >gi|327269008|ref|XP_003219287.1| PREDICTED: GTP-binding protein 8-like [Anolis carolinensis] Length = 279 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 98/192 (51%), Gaps = 17/192 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKN--LARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P+ PE+ F GRSNVGKSSLI L + R S PG T+ +NFF F Sbjct: 97 VPQLSLPEVCFLGRSNVGKSSLIKALFSLAPDVEVRVSKNPGHTKKMNFFKVGKF----- 151 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVDMPG+GY RAPK + ++ YL+ R L+ +LL+D + G+++ID Sbjct: 152 ----FTLVDMPGFGY-RAPK----DFAEMVEPYLNHRPNLQRTFLLVDAQVGIQEIDNIA 202 Query: 142 FSFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L++ + Y +VLTKIDK S A L+ ++ P++ P SS+ GI Sbjct: 203 IEMLEEFGIPYVLVLTKIDKASKRVMAMNVLKIQDFVKEKTQVCFPQLFPVSSLYYSGIH 262 Query: 201 VLRKAILETINY 212 +LR I Y Sbjct: 263 ILRCFIAHVAGY 274 >gi|110644204|ref|YP_671934.1| GTP-binding protein EngB [Escherichia coli 536] gi|110345796|gb|ABG72033.1| probable GTP-binding protein EngB [Escherichia coli 536] Length = 197 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 61/179 (34%), Positives = 98/179 (54%), Gaps = 12/179 (6%) Query: 30 PEIAF--SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 PE+ + SN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 12 PELKWLLQAVSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD---------GKR 62 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K +DQ + + Sbjct: 63 LVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVD 122 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ ++LTK DKL+ + L + + + +V SS+K++G++ LR+ + Sbjct: 123 SNIAVLVLLTKTDKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLKKQGVDKLRQKL 180 >gi|53713337|ref|YP_099329.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis YCH46] gi|253565316|ref|ZP_04842771.1| GTPase EngB [Bacteroides sp. 3_2_5] gi|265763411|ref|ZP_06091979.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_16] gi|81382646|sp|Q64UN4|ENGB_BACFR RecName: Full=Probable GTP-binding protein EngB gi|52216202|dbj|BAD48795.1| putative GTP-binding protein [Bacteroides fragilis YCH46] gi|251945595|gb|EES86002.1| GTPase EngB [Bacteroides sp. 3_2_5] gi|263256019|gb|EEZ27365.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_16] gi|301163141|emb|CBW22690.1| putative GTP-binding cell division protein [Bacteroides fragilis 638R] Length = 201 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 100/188 (53%), Gaps = 12/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F L NN Sbjct: 19 PAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHF-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR +K + +I Y+ ER + +++LID R ++ID + + Sbjct: 70 SWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG-IEVLR 203 L + + + I+ TK DKL + + +R P TSS +R G EVL Sbjct: 130 LGENGIPFAIIFTKADKLKGGRLKINISAYLRELRKQWEELPPYFITSSEERLGRTEVLN 189 Query: 204 KAILETIN 211 +E+IN Sbjct: 190 --YIESIN 195 >gi|134077679|emb|CAK45719.1| unnamed protein product [Aspergillus niger] Length = 404 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 35/209 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N L+ ++ + TS+ PGRTQ +N F K + L+ Sbjct: 102 PEVAFLGRSNVGKSSLLNALMGQE-ICWTSSKPGRTQTMNAF---GIGGTKGGESKVVLL 157 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG K + WG I++YL R LR ++LID +HG+K D+ + A Sbjct: 158 DMPGYG-----KGSRSEWGAEIMKYLKNRKQLRRTFILIDGQHGIKHSDEGILELFRHYA 212 Query: 150 VSYQIVLTKID--------KLSPTTAQETLEKTKYLIRNY------------PTAHPEVI 189 + +QI+++K+D +L+ +E L +T+ I+ P A E++ Sbjct: 213 IPHQIIVSKVDNIMAARTSQLATGVTEERLLQTQKKIQELRPIIQPVGRDEGPGALGEIL 272 Query: 190 PTSS-VKRK-----GIEVLRKAILETINY 212 SS V R GI +R AIL Y Sbjct: 273 TCSSKVLRTPGNYLGISPIRWAILSAAGY 301 >gi|317031302|ref|XP_001393150.2| GTP-binding protein (EngB) [Aspergillus niger CBS 513.88] Length = 327 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 35/209 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N L+ ++ + TS+ PGRTQ +N F K + L+ Sbjct: 102 PEVAFLGRSNVGKSSLLNALMGQE-ICWTSSKPGRTQTMNAF---GIGGTKGGESKVVLL 157 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG K + WG I++YL R LR ++LID +HG+K D+ + A Sbjct: 158 DMPGYG-----KGSRSEWGAEIMKYLKNRKQLRRTFILIDGQHGIKHSDEGILELFRHYA 212 Query: 150 VSYQIVLTKID--------KLSPTTAQETLEKTKYLIRNY------------PTAHPEVI 189 + +QI+++K+D +L+ +E L +T+ I+ P A E++ Sbjct: 213 IPHQIIVSKVDNIMAARTSQLATGVTEERLLQTQKKIQELRPIIQPVGRDEGPGALGEIL 272 Query: 190 PTSS-VKRK-----GIEVLRKAILETINY 212 SS V R GI +R AIL Y Sbjct: 273 TCSSKVLRTPGNYLGISPIRWAILSAAGY 301 >gi|225438255|ref|XP_002264972.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|225469400|ref|XP_002263516.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 316 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 72/192 (37%), Positives = 97/192 (50%), Gaps = 14/192 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 132 PKDDRPEFAILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLINHFLVNK--------- 182 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +VD+PGYG+A+AP+ W Y R+TL V LLID ++ID D ++ Sbjct: 183 SWYIVDLPGYGFAKAPESARMDWSAFTKGYFLNRATLVAVLLLIDASVPPQKIDLDCANW 242 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK----YLIRNYPTAHPEVIPTSSVKRKGIE 200 L + + V TK DK+ + E K + +NY HP I TSSV G + Sbjct: 243 LGRNNIPMTFVFTKCDKMKGGKGKRPDENIKNFQVMMGQNY-GKHPPWIMTSSVTGLGRD 301 Query: 201 VLRKAILETINY 212 L + + NY Sbjct: 302 ELLLHMSQLRNY 313 >gi|76578808|gb|ABA48283.1| GTP-binding protein [Burkholderia pseudomallei 1710b] Length = 506 Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 5/161 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F + Sbjct: 307 LPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAE----- 361 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA P W L+ YL R L + L++D R + ++D+ + Sbjct: 362 PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRPLTELDRRMIE 421 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 + +LTK DKL+ + L T+ + Y A Sbjct: 422 WFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDA 462 >gi|146305196|ref|YP_001185661.1| GTPase EngB [Pseudomonas mendocina ymp] gi|166225970|sp|A4XNL3|ENGB_PSEMY RecName: Full=Probable GTP-binding protein EngB gi|145573397|gb|ABP82929.1| cell division checkpoint GTPase YihA [Pseudomonas mendocina ymp] Length = 216 Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P+ E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FLISAAKVDQCPEDSGLEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFRL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L + L++D RH Sbjct: 75 DDERRL---------VDLPGYGYAKVPIPLKQHWQKHLEAYLGSRESLCGLVLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + D+ + + + I+LTK DKL+ A+ L K + IR + S+ Sbjct: 126 LTEFDRMMLDWSVASGMPLHILLTKADKLAFGAAKNALLKVRQEIRKQWGEGISIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGVE 192 >gi|282856770|ref|ZP_06266031.1| ribosome biogenesis GTP-binding protein YsxC [Pyramidobacter piscolens W5455] gi|282585393|gb|EFB90700.1| ribosome biogenesis GTP-binding protein YsxC [Pyramidobacter piscolens W5455] Length = 198 Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 62/156 (39%), Positives = 85/156 (54%), Gaps = 14/156 (8%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFS 77 I P PE+A +GRSNVGKSSL+N L +K LAR S+ PG T+ +NFF P F+ Sbjct: 15 IQQFPAGSLPEVALAGRSNVGKSSLLNKLAGQK-LARVSSEPGMTRSVNFFDVQAPHPFT 73 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LVD+PG+GYA K W L+ Y+ R TL V L+D RHG+ Sbjct: 74 ----------LVDLPGFGYASRSKDERKGWASLVEGYIERRGTLALVVHLVDIRHGLLDK 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 D+++ +L V Q+V TK DK++ T + + K Sbjct: 124 DRELQEWLKALDVPMQVVFTKADKIAKTKRKSVIMK 159 >gi|296415306|ref|XP_002837331.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633195|emb|CAZ81522.1| unnamed protein product [Tuber melanosporum] Length = 337 Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 14/135 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N L++ K LA TS+ PGRT+ LN + +N + L+ Sbjct: 98 PEVAFLGRSNVGKSSLLNALLD-KPLAHTSSKPGRTRLLNAY---SIANGRG-----VLL 148 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG+ + D WG +++YL R LR +LL+D HG K D+ + + Sbjct: 149 DMPGYGH-----NSRDEWGVQVMKYLQRRRELRRAFLLVDAEHGFKGFDRLMVRTFAEHG 203 Query: 150 VSYQIVLTKIDKLSP 164 V++Q+VL+K+D+L P Sbjct: 204 VAFQVVLSKVDRLRP 218 >gi|15239069|ref|NP_196709.1| GTP binding [Arabidopsis thaliana] gi|7573405|emb|CAB87708.1| putative GTP-binding protein [Arabidopsis thaliana] gi|16648724|gb|AAL25554.1| AT5g11480/F15N18_70 [Arabidopsis thaliana] gi|23505999|gb|AAN28859.1| At5g11480/F15N18_70 [Arabidopsis thaliana] gi|332004301|gb|AED91684.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 318 Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 98/193 (50%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 131 PADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRIND--------- 181 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA AP + W Y RSTL V+LL+D VK ID + S+ Sbjct: 182 KWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYASW 241 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + V ++ TK DK + +++ + LI+ + P I TSSV +G Sbjct: 242 LGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFFETTPPWIMTSSVTNQGR 301 Query: 200 EVLRKAILETINY 212 + + + + NY Sbjct: 302 DEILLHMAQLRNY 314 >gi|295664617|ref|XP_002792860.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226278381|gb|EEH33947.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 319 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 58/143 (40%), Positives = 86/143 (60%), Gaps = 9/143 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E +P + PE+ F GRSNVGKSSL+N L+ R ++ TS+ GRT LN + Sbjct: 74 EFRTIPMSNVPEVVFLGRSNVGKSSLLNALMER-DVCYTSSKLGRTHTLNAY---GVGGR 129 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K+ + LVD PGYG K + + WG I++YL++R LR ++L+D HG+K D+ Sbjct: 130 KDGEARVVLVDTPGYG-----KGSNEKWGEEIIKYLTKRKQLRRTFVLVDSHHGIKPGDR 184 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 DVFS L A+ +Q++L+K D + Sbjct: 185 DVFSLLRSAAIPHQVILSKADSV 207 >gi|205374362|ref|ZP_03227160.1| GTPase EngB [Bacillus coahuilensis m4-4] Length = 193 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE A +GRSNVGKSS IN ++ RK+LAR S+ PG+TQ LNF++ ++ Sbjct: 19 PDDNLPEFALAGRSNVGKSSFINKMLGRKSLARISSKPGKTQTLNFYIIEE--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PGYGYA+ K +WG +I Y + R L L++D RH + D ++ F Sbjct: 70 QLYFVDVPGYGYAKVSKTERAAWGKMIETYFTSRDKLEAAVLIVDLRHPPTKDDIMMYDF 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 + + I+ TK DK+ Sbjct: 130 IKHYEIPVIIIATKADKI 147 >gi|78777274|ref|YP_393589.1| GTPase EngB [Sulfurimonas denitrificans DSM 1251] gi|78497814|gb|ABB44354.1| GTP-binding [Sulfurimonas denitrificans DSM 1251] Length = 205 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 102/191 (53%), Gaps = 17/191 (8%) Query: 14 FLRGVPEI-GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ P + G P EI F RSNVGKSSL+N L N K LA+ S+ PG+T+ +N+F Sbjct: 9 FITSAPNLDGAPPSIEQNEIVFMARSNVGKSSLLNALTNHKGLAKVSSTPGKTRLINYF- 67 Query: 73 PKDFSNLKNNLPAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 F N +++L + A VD+PG+GYA+ K W + Y++ R ++ L+DCR Sbjct: 68 DVTFINREDSLKSFAKFVDLPGFGYAKVAKSIKYDWERNLTDYIASRKQIKIFIHLVDCR 127 Query: 132 HGVKQIDQDVFSFLDKKAVSYQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 H ID+ V FL + A Q + TKIDKL+ E L R++P A Sbjct: 128 HPFLDIDKSVSDFLLECANPTQHIFQIFTKIDKLNQKEQTE-------LRRDFPNA---- 176 Query: 189 IPTSSVKRKGI 199 + SS K+KG+ Sbjct: 177 LMVSSSKKKGL 187 >gi|312793144|ref|YP_004026067.1| ribosome biogenesis gtp-binding protein ysxc [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180284|gb|ADQ40454.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor kristjanssonii 177R1B] Length = 204 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 78/134 (58%), Gaps = 10/134 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ GRSNVGKSS IN + K LA+ + PG+T+ +NFF N+ N +V Sbjct: 26 PEMCICGRSNVGKSSFINAVFKDK-LAKVGSTPGQTRTINFF------NIDNKF---RVV 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA K+ W +I YL ER L+ LL+D RH + D+ + SF DKK Sbjct: 76 DLPGYGYAEVSKEEKRRWRTMIEEYLLERQELKLSVLLLDSRHLPTEDDKIMLSFFDKKE 135 Query: 150 VSYQIVLTKIDKLS 163 + IVLTK DKLS Sbjct: 136 IPIMIVLTKCDKLS 149 >gi|34558350|ref|NP_908165.1| ribosome biogenesis GTP-binding protein YsxC [Wolinella succinogenes DSM 1740] gi|81653310|sp|Q7M7V3|ENGB_WOLSU RecName: Full=Probable GTP-binding protein EngB gi|34484069|emb|CAE11065.1| PUTATIVE GTP BINDING PROTEIN [Wolinella succinogenes] Length = 200 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 112/203 (55%), Gaps = 22/203 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + P E+ F GRSNVGKS+LIN++V+ K LA++S+ PG+TQ +N+F Sbjct: 9 FLTSASALSQTPPPKNSEVVFIGRSNVGKSTLINLIVDSKGLAKSSSTPGKTQLINYF-E 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + +P + LVD+PG+GYA+ K+ WG ++ +L ER +++ LID RH Sbjct: 68 TIWKRGEERIP-LWLVDLPGFGYAKVSKEMRKDWGEKLIHFLQERRSIKLFVQLIDARHP 126 Query: 134 VKQIDQDVFSFL------DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID + ++ + D+K + V TK+DKL+ ++ ++ +P+ Sbjct: 127 DLAIDAEAWAMIGAIKRGDQKVIR---VFTKMDKLNRNDQKKLQQR-----------YPD 172 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 T+ + ++GI +R+ +L+ + Sbjct: 173 ACFTAMLGKEGIASVRERVLKDV 195 >gi|21592799|gb|AAM64748.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 318 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 74/193 (38%), Positives = 98/193 (50%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 131 PADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRIND--------- 181 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYA AP + W Y RSTL V+LL+D VK ID + S+ Sbjct: 182 KWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYASW 241 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + V ++ TK DK + +++ + LI+ + P I TSSV +G Sbjct: 242 LGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFFETTPPWIMTSSVTNQGR 301 Query: 200 EVLRKAILETINY 212 + + + + NY Sbjct: 302 DEILLHMAQLRNY 314 >gi|218130918|ref|ZP_03459722.1| hypothetical protein BACEGG_02519 [Bacteroides eggerthii DSM 20697] gi|317476229|ref|ZP_07935480.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides eggerthii 1_2_48FAA] gi|217987262|gb|EEC53593.1| hypothetical protein BACEGG_02519 [Bacteroides eggerthii DSM 20697] gi|316907640|gb|EFV29343.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides eggerthii 1_2_48FAA] Length = 202 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 96/193 (49%), Gaps = 12/193 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSN 78 ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F + K++ Sbjct: 14 DVNKCPGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLINKNW-- 71 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 +VD+PGYGYAR +K + +I Y+ +R + +++L+D RH + ID Sbjct: 72 --------YIVDLPGYGYARRGQKGQEQIQRIIETYILQREQMTSLFVLVDSRHEPQAID 123 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +L + V + IV TK DKL + + P TSS R G Sbjct: 124 LSFIEWLGENGVPFAIVFTKADKLKGGKINSNIRHYLEKLHEQWEELPPYFVTSSENRMG 183 Query: 199 IEVLRKAILETIN 211 E L I E IN Sbjct: 184 REELLNYI-EQIN 195 >gi|299145429|ref|ZP_07038497.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_23] gi|298515920|gb|EFI39801.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_23] Length = 201 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 14/189 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N F + K++ Sbjct: 19 PAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINHFLINKNW------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYAR +K D +I Y+ ER + +++LID R ++ID + Sbjct: 72 ---YLVDLPGYGYARRGQKGKDQIHTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFME 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +L + + + I+ TK DKL + + + L + + P + +S + +E+L Sbjct: 129 WLGENGIPFSIIFTKADKLKGGRLKMNINAYLRELSKQWEELPPHFVSSSEDRMGRMEIL 188 Query: 203 RKAILETIN 211 +E IN Sbjct: 189 N--YIENIN 195 >gi|82541411|ref|XP_724947.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23479777|gb|EAA16512.1| probable GTP-binding protein engb-related [Plasmodium yoelii yoelii] Length = 236 Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 84/152 (55%), Gaps = 9/152 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA GRSNVGKSSLIN L+N + +A+ S PGRT+HL + N L +++V Sbjct: 32 PQIAIFGRSNVGKSSLINALMNYREVAQASKTPGRTRHLFIY---------NLLNYISVV 82 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ K D+W LI YL++ L+ LI+C D + K Sbjct: 83 DLPGYGFAKVSKSLRDNWSILIEEYLNKAKNLKRALCLIECTELFTPYDYVLLDMFIMKN 142 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +QI++TKIDKL + K +I NY Sbjct: 143 IPFQIIVTKIDKLKAEELHHAMIKIISIIENY 174 >gi|68076099|ref|XP_679969.1| GTP-binding protein [Plasmodium berghei strain ANKA] gi|56500827|emb|CAH99774.1| GTP-binding protein, putative [Plasmodium berghei] Length = 264 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 84/152 (55%), Gaps = 9/152 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+I GRSNVGKSSLIN L+N + +A+ S PGRT+HL + N L +++V Sbjct: 60 PQIGIFGRSNVGKSSLINALMNYREVAQASKTPGRTRHLFIY---------NLLNHISVV 110 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ K D+W LI YL++ L+ LI+C D + L K Sbjct: 111 DLPGYGFAKVSKNLRDNWSILIEEYLNKAKNLKRALCLIECTELFTPYDYVLLDMLIMKN 170 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +QI++TKIDKL + K +I NY Sbjct: 171 IPFQIIVTKIDKLKAEELHHAMVKIISIIENY 202 >gi|152988688|ref|YP_001351602.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas aeruginosa PA7] gi|166225968|sp|A6VEW7|ENGB_PSEA7 RecName: Full=Probable GTP-binding protein EngB gi|150963846|gb|ABR85871.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 215 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P E+AF+GRSN GKSS +N L + NLARTS PGRTQ LNFF Sbjct: 16 FLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTH-ANLARTSKTPGRTQLLNFFSL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ P W + YLS R +L V+L++D RH Sbjct: 75 DE---------SRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRESLAGVFLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + + + +++TK DKL+ A+ L K + ++ + S+ Sbjct: 126 LTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVASLQLFSA 185 Query: 194 VKRKGIE 200 KR+G++ Sbjct: 186 PKRQGVD 192 >gi|121999169|ref|YP_001003956.1| GTP-binding protein, HSR1-like [Halorhodospira halophila SL1] gi|121590574|gb|ABM63154.1| cell division checkpoint GTPase YihA [Halorhodospira halophila SL1] Length = 206 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 9/178 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSNVGKSS++N L ++ LARTS PGRTQ +N F D + L+D Sbjct: 29 EVAFAGRSNVGKSSVLNALTGQRKLARTSGTPGRTQAINCF---DLDETRR------LID 79 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ P+ W + YL R +L V +++D RH +D + + + Sbjct: 80 LPGYGYAKVPQAVKRRWERALPDYLRNRQSLYGVVVIMDVRHAPTDLDLQMLRWCADAGL 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 VLTK DKL A L+ + P V S++K +GI+ L + E Sbjct: 140 VLHGVLTKADKLKRGAAHNRLQAVQRATAEDGVTLPSVQLFSALKGEGIDELTGVLDE 197 >gi|70733595|ref|YP_257235.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas fluorescens Pf-5] gi|68347894|gb|AAY95500.1| GTP-binding protein EngB [Pseudomonas fluorescens Pf-5] Length = 268 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 71 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFKL 129 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 130 DDDRRL---------VDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLKGLILMMDIRHP 180 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 181 MTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSQIRKGWGEAVTIQLFSA 240 Query: 194 VKRKGIE 200 KR G+E Sbjct: 241 PKRMGLE 247 >gi|302872193|ref|YP_003840829.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor obsidiansis OB47] gi|302575052|gb|ADL42843.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor obsidiansis OB47] Length = 204 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 76/134 (56%), Gaps = 10/134 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ GRSNVGKSS IN + K LA+ + PG+T+ +NFF D +V Sbjct: 26 PEMCICGRSNVGKSSFINAVFKDK-LAKVGSTPGKTRTINFFNIDD---------KFRVV 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA K+ W +I YL ER L+ LL+D RH + D+ + SF DKK Sbjct: 76 DLPGYGYAEVSKEEKRRWRKMIEEYLLERQELKLSVLLLDSRHLPTEDDKIMLSFFDKKE 135 Query: 150 VSYQIVLTKIDKLS 163 + IVLTK DKLS Sbjct: 136 IPIMIVLTKCDKLS 149 >gi|157373236|ref|YP_001471836.1| GTPase EngB [Shewanella sediminis HAW-EB3] gi|189037191|sp|A8FPD5|ENGB_SHESH RecName: Full=Probable GTP-binding protein EngB gi|157315610|gb|ABV34708.1| GTP-binding protein, HSR1-related [Shewanella sediminis HAW-EB3] Length = 220 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 101/189 (53%), Gaps = 14/189 (7%) Query: 14 FLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I L P EIAF+GRSN GKSS +N+L ++K+LARTS PGRTQ +N Sbjct: 13 FLISAPDIAHLNEHLPGDAGVEIAFAGRSNAGKSSALNLLTDQKSLARTSRTPGRTQLIN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F L N LVD+PGYG+A+ P W + YL ER L + +L+D Sbjct: 73 IF------ELDEN---RRLVDLPGYGFAQVPLALKKKWQESLGEYLQERQCLGGMVVLMD 123 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +D + ++ + + +LTK DKL + + + + + + ++ +V Sbjct: 124 IRHPLKDLDMQMIAWALESEIPVLALLTKADKLKQSERMKMVNEVRKHLGDFDD-RVKVE 182 Query: 190 PTSSVKRKG 198 P SS+K G Sbjct: 183 PFSSLKGIG 191 >gi|121611742|ref|YP_999549.1| ribosome biogenesis GTP-binding protein YsxC [Verminephrobacter eiseniae EF01-2] gi|121556382|gb|ABM60531.1| GTP-binding protein, HSR1-related [Verminephrobacter eiseniae EF01-2] Length = 228 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 97/190 (51%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LP PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N F Sbjct: 29 FLTTAAQLHHLPPLAVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINLFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + L D+PGYGYA + + W ++V YL R L + LL D R G Sbjct: 89 G-----RQGVMDAVLADLPGYGYAAVSRSDKMRWQQVMVNYLVSRPGLTGIVLLCDPRLG 143 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + +D+ + L ++ + + IVLTK DKL+ + L T+ +V Sbjct: 144 LTGLDEALLEVLRPRVQQGLKFLIVLTKADKLTRAEQAKALSVTR-----LQAGGGQVRL 198 Query: 191 TSSVKRKGIE 200 S++K++G++ Sbjct: 199 FSALKKQGVD 208 >gi|70951784|ref|XP_745105.1| GTP-binding protein [Plasmodium chabaudi chabaudi] gi|56525322|emb|CAH75281.1| GTP-binding protein, putative [Plasmodium chabaudi chabaudi] Length = 264 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 98/198 (49%), Gaps = 33/198 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA GRSNVGKSSLIN L+N + +A+ S PGRT+HL + N L +++V Sbjct: 60 PQIAIFGRSNVGKSSLINALMNYREVAQASKTPGRTRHLFIY---------NLLNHISVV 110 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ K+ D+W LI YL++ L+ LI+C D + K Sbjct: 111 DLPGYGFAKVSKELRDNWSILIEEYLNKAKNLKRALCLIECTELFTPYDYVLLDMFIMKN 170 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--------PTAHPE-------------- 187 + +QI++TKIDKL + K I NY T H + Sbjct: 171 IPFQIIVTKIDKLKAEELHHAMIKIISTIENYKKKVKVFNETKHKKGNTFKKENCEFNIN 230 Query: 188 --VIPTSSVKRKGIEVLR 203 + SS+KR GI+ LR Sbjct: 231 EYLFNVSSLKRFGIQELR 248 >gi|301630918|ref|XP_002944562.1| PREDICTED: probable GTP-binding protein engB-like [Xenopus (Silurana) tropicalis] Length = 230 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LP PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N F Sbjct: 31 FLTTAAQLHQLPAIEVPEIAFVGRSNAGKSTCINTLTQQRQLAFASKKPGRTQHINLFAL 90 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L D+PGYGYA + + W ++ YL R L + LL D R G Sbjct: 91 GKQGQMD-----AVLADLPGYGYAAVSRTDKQRWQQVMANYLVSRQGLSGIVLLCDPRLG 145 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D + + ++ + + ++LTK DKL+ + L T+ EV Sbjct: 146 MTELDDALLEVVRPRVEQGLKFLVLLTKADKLTRAQQAKALSITR-----LQAGGGEVKM 200 Query: 191 TSSVKRKGIE 200 S++KR+G++ Sbjct: 201 FSALKRQGVD 210 >gi|221057083|ref|XP_002259679.1| GTP-binding protein [Plasmodium knowlesi strain H] gi|193809751|emb|CAQ40453.1| GTP-binding protein, putative [Plasmodium knowlesi strain H] Length = 280 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 62/152 (40%), Positives = 85/152 (55%), Gaps = 9/152 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA GRSNVGKSSLIN L+N + +A+ S PGRT+HL F NL N+L ++V Sbjct: 76 PQIAIFGRSNVGKSSLINALLNNREVAQASRTPGRTRHLFIF------NLLNHL---SIV 126 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ K D+W LI YL L+ LI+C D + L K Sbjct: 127 DLPGYGFAKVSKDMRDNWSILIEEYLKRAVNLKRALCLIECTEFFTPHDFVLLDMLITKG 186 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V +QIV+TK+D+L + K +I +Y Sbjct: 187 VPFQIVVTKVDRLKAHELHTLMLKVLSVIDDY 218 >gi|119369233|sp|Q4KKJ8|ENGB_PSEF5 RecName: Full=Probable GTP-binding protein EngB Length = 213 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFKL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 75 DDDRRL---------VDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSQIRKGWGEAVTIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|253581499|ref|ZP_04858724.1| GTP-binding protein [Fusobacterium varium ATCC 27725] gi|251836569|gb|EES65104.1| GTP-binding protein [Fusobacterium varium ATCC 27725] Length = 196 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 16/162 (9%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + F KSA ++ + PE + E AF GRSNVGKSSLIN + RK LA+TS Sbjct: 3 IKQADFVKSA-VYEKDYPE-----QLNNMEFAFVGRSNVGKSSLINSITGRKKLAKTSKT 56 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N+F NN +VD+PGYG+A+ PK+ WG + RY++ Sbjct: 57 PGRTQLINYFKI-------NN--EFFIVDLPGYGFAKVPKEMKAEWGKTMDRYIASPRK- 106 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 + V++L+D R Q D ++ +LD + ++I+ TK+DK+S Sbjct: 107 KLVFVLLDIRRIPSQEDIEMLVYLDHHDIPFKIIFTKMDKVS 148 >gi|293376040|ref|ZP_06622293.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter sanguinis PC909] gi|325844606|ref|ZP_08168249.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter sp. HGF1] gi|292645341|gb|EFF63398.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter sanguinis PC909] gi|325489031|gb|EGC91418.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter sp. HGF1] Length = 208 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/149 (42%), Positives = 83/149 (55%), Gaps = 11/149 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE+ F+GRSNVGKSS IN L NRK+LAR S+ PG+TQ LNF+ D Sbjct: 19 PTDGLPEMIFAGRSNVGKSSFINSLTNRKHLARVSSRPGKTQTLNFYNINDM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 M LVD+PGYGYA+ + +S+G +I YL ER L LL+D RH D ++ Sbjct: 71 -MYLVDVPGYGYAKVNRSLKESFGRMIEEYLVERDELILGVLLVDYRHKPTAEDIAMYQL 129 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETL 171 + ++ TK DK+ S QE L Sbjct: 130 YKYYEIPSVVIGTKKDKVNRSQYKKQEKL 158 >gi|119773234|ref|YP_925974.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella amazonensis SB2B] gi|166225978|sp|A1S1P8|ENGB_SHEAM RecName: Full=Probable GTP-binding protein EngB gi|119765734|gb|ABL98304.1| cell division checkpoint GTPase YihA [Shewanella amazonensis SB2B] Length = 217 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/190 (36%), Positives = 99/190 (52%), Gaps = 16/190 (8%) Query: 14 FLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I L K P EIAF+GRSN GKSS +N L +K+LARTS PGRTQ +N Sbjct: 13 FLISAPDIAHLDKHLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLARTSKTPGRTQLIN 72 Query: 70 FFVPKDFSNLKNNLPAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 F L A LVD+PGYG+A+ P + W + YL +R+ L V +L+ Sbjct: 73 VF----------ELDAQRRLVDLPGYGFAKVPLEMKHKWQNALGEYLQKRACLSGVVVLM 122 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D RH +K +D+ + + + +LTK DKL + +T+ + + + V Sbjct: 123 DIRHPLKDLDRQMIEWSVASEIPVLALLTKADKLGQSEKMKTVNAVRKELAEFGD-WVSV 181 Query: 189 IPTSSVKRKG 198 P S++K G Sbjct: 182 EPFSALKGTG 191 >gi|283769488|ref|ZP_06342384.1| ribosome biogenesis GTP-binding protein YsxC [Bulleidia extructa W1219] gi|283103756|gb|EFC05142.1| ribosome biogenesis GTP-binding protein YsxC [Bulleidia extructa W1219] Length = 195 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 16/206 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + ++ W+ P+ P+ PEI F GRSN GKSSLIN LVNR LA T PG+T+ Sbjct: 3 YYEAKWMATAARPD--QWPRHHLPEIVFVGRSNAGKSSLINALVNRNQLAYTGKTPGKTR 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNFFV D PGYGYA + ++ +G L+ Y +RS L+ + L Sbjct: 61 LLNFFVVN---------AQFVFTDAPGYGYAVGNRDSLIEFGNLMEPYFEKRSNLKAMVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAH 185 ++DCR + D + + ++ +V TK DKLS L+ +++I + Sbjct: 112 VLDCRRTPSREDIAMVDYAKANHLAILVVCTKKDKLS----YGKLKNQQFMIAKELKLNA 167 Query: 186 PEVIPTSSVKRKGIEVLRKAILETIN 211 + SVK++GI+ + I ET++ Sbjct: 168 SSFLAVDSVKKQGIDEVWHKIHETLS 193 >gi|222109904|ref|YP_002552168.1| ribosome biogenesis gtp-binding protein ysxc [Acidovorax ebreus TPSY] gi|254783195|sp|B9MDD6|ENGB_ACIET RecName: Full=Probable GTP-binding protein EngB gi|221729348|gb|ACM32168.1| GTP-binding protein HSR1-related [Acidovorax ebreus TPSY] Length = 218 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 99/191 (51%), Gaps = 15/191 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LP PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N F Sbjct: 9 FLTTAAQLHHLPAIEVPEIAFVGRSNAGKSTCINTLTQQRQLAFASKKPGRTQHINLFAL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K L D+PGYGYA + + W +++ YL R +L + LL D R G Sbjct: 69 G-----KQGATDAVLADLPGYGYAAVSRSDKLRWQQVMLSYLVSRESLTAIVLLCDPRLG 123 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVI 189 + ++D+ + + + + + + ++LTK DKL+ E+ K L I EV Sbjct: 124 LTELDEALLNAVRPRVEAGLKFLVLLTKADKLTRA------EQAKALSITRLQAGGGEVR 177 Query: 190 PTSSVKRKGIE 200 S++K++G++ Sbjct: 178 MFSALKKQGVD 188 >gi|126325745|ref|XP_001366885.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 288 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 102/183 (55%), Gaps = 19/183 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKN 81 P + PEI F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 103 PSSSSPEICFIGRSNVGKSSLIKALFSLVPEVEVRVSKKPGHTKKMNFFKVGKYFT---- 158 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVDMPGYG+ +APK V+ ++ YL ER+ L +LL+D G+++ D+ Sbjct: 159 ------LVDMPGYGF-KAPKDFVE----MVEAYLKERTNLTRTFLLVDSVVGIQKADRIA 207 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ A+ Y +VLTKIDK S A++ L+ +++ P++ P SSV GI Sbjct: 208 IEMCEEYALPYVMVLTKIDKASKGHIAKQVLQIQEFVDTQTQGCFPQLFPVSSVTYSGIH 267 Query: 201 VLR 203 +LR Sbjct: 268 LLR 270 >gi|262340870|ref|YP_003283725.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272207|gb|ACY40115.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 208 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/169 (40%), Positives = 92/169 (54%), Gaps = 10/169 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE AF GRSNVGKSSLIN + RK +A+ S+ PGRTQ++N F L NN L+ Sbjct: 23 PEYAFVGRSNVGKSSLINWITGRKKIAKVSSYPGRTQYINHF-------LINN--QWYLI 73 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+ A KK + LI Y+ R L ++LLID R ++QID D L+ K Sbjct: 74 DLPGYGFF-AEKKIKEKAQKLISDYIFHRKNLVGLFLLIDSRFLIQQIDLDFIQKLNNKK 132 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + IV TK DKL+ ++ + I N P S+ K+ G Sbjct: 133 MDFCIVFTKTDKLNYKLIEKNISFCIEKIENNGFTMPVWFKVSAKKKDG 181 >gi|258647974|ref|ZP_05735443.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella tannerae ATCC 51259] gi|260851815|gb|EEX71684.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella tannerae ATCC 51259] Length = 204 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/137 (42%), Positives = 79/137 (57%), Gaps = 9/137 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L R LA+TS+ PG+T +N F+ D Sbjct: 19 PATMIPEYAFIGRSNVGKSSLINMLTGRSALAKTSSTPGKTLLINHFIIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYG+A+ KK + +I RY++ R L +++LID R + ID + F Sbjct: 70 EWFLVDLPGYGFAKRSKKEREELRKMIERYVTRREQLTNLFVLIDSRLRPQTIDLEFIRF 129 Query: 145 LDKKAVSYQIVLTKIDK 161 L + V + I+ TK DK Sbjct: 130 LGEAGVPFSIIFTKADK 146 >gi|304437031|ref|ZP_07396994.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369982|gb|EFM23644.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 207 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 105/212 (49%), Gaps = 9/212 (4%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + TK+A +L P+ P +AF GRSNVGKSSLIN L + LA S Sbjct: 1 MSEPVVITKAA--YLASAVRRDQYPEEQRPAVAFIGRSNVGKSSLINSLTRIRQLAHVSG 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ +NF+ + + LVD+PGYGYA+A +++ +W I Y Sbjct: 59 KPGKTQTINFYELLMRIDGGEERHPVHLVDLPGYGYAKAARESRKTWAKFIEEYFLHAEN 118 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L V LL+D RH D+ +F +L + ++ TK DKL T Q+ L + R Sbjct: 119 LHFVCLLLDIRHAPMPSDRKMFEWLVSHDIPVLVIATKADKLGRTARQKQLSLMR---RT 175 Query: 181 YPTAHPEVIPTSSVKRKG----IEVLRKAILE 208 ++P S K +G ++V+++ +LE Sbjct: 176 LDVPDLSILPYSVPKNEGRTELLDVMKEYLLE 207 >gi|255691813|ref|ZP_05415488.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides finegoldii DSM 17565] gi|260622531|gb|EEX45402.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides finegoldii DSM 17565] Length = 201 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/189 (36%), Positives = 100/189 (52%), Gaps = 14/189 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F + K++ Sbjct: 19 PAGTFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTMLINHFLINKNW------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYAR +K D +I Y+ ER + ++LLID R ++ID + Sbjct: 72 ---YLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFLLIDSRLEPQKIDLEFME 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +L + + + I+ TK DKL + + + L + + P I +S + E+L Sbjct: 129 WLGENGIPFSIIFTKADKLKSGRLKMNINAYLRELSKQWEELPPYFISSSENRTGRTEIL 188 Query: 203 RKAILETIN 211 +E+IN Sbjct: 189 --DYIESIN 195 >gi|326315774|ref|YP_004233446.1| GTP-binding protein engB [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372610|gb|ADX44879.1| GTP-binding protein engB [Acidovorax avenae subsp. avenae ATCC 19860] Length = 253 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LP PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 31 FLTTAAQLHHLPPIDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINL--- 87 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F+ + N+ L D+PGYGYA + + W ++V YL R L + LL D R G Sbjct: 88 --FALGRQNVTDAVLADLPGYGYAAVSRSDKQRWQQVMVNYLVSRKGLTGIVLLCDPRLG 145 Query: 134 VKQIDQDVFSFLDKK---AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ + + + + + ++LTK DKL+ L T+ EV Sbjct: 146 LTELDEALLEAVRPRVEAGLKFLVLLTKADKLTRAEQARVLSITRLQAGGG-----EVKM 200 Query: 191 TSSVKRKGIE 200 S++K++G++ Sbjct: 201 FSALKKQGVD 210 >gi|295695317|ref|YP_003588555.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus tusciae DSM 2912] gi|295410919|gb|ADG05411.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus tusciae DSM 2912] Length = 199 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 18/163 (11%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNN 82 PK G PE A GRSNVGKSSLIN L RK LA TSN PGRT+ LNF+ + F Sbjct: 18 FPKDGLPEFALVGRSNVGKSSLINRLAMRKKLAHTSNTPGRTRTLNFYRINSRFY----- 72 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 LVD+PGYGYA+ K WG ++ +L+ R +L V +ID RH D+ + Sbjct: 73 -----LVDLPGYGYAQVSKSERLRWGAMVENFLAHRESLAGVIHVIDLRHPPTADDRLMA 127 Query: 143 SFLDKKAVSYQIVLTKIDKLSPT-------TAQETLEKTKYLI 178 +L ++ +V TK DK++ + A+ TL+ ++ ++ Sbjct: 128 EWLRAHDLAVLVVATKADKIARSRWESHRRQAEATLQPSRCVV 170 >gi|312898490|ref|ZP_07757880.1| ribosome biogenesis GTP-binding protein YsxC [Megasphaera micronuciformis F0359] gi|310620409|gb|EFQ03979.1| ribosome biogenesis GTP-binding protein YsxC [Megasphaera micronuciformis F0359] Length = 218 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 6/187 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L E P PEIAF GRSNVGKSSLIN L N++ LA+ S APG+T+ +NFF Sbjct: 13 YLTSAVEAKQYPCEERPEIAFLGRSNVGKSSLINSLCNQRGLAKVSGAPGKTRTINFFTG 72 Query: 74 --KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 ++ + ++ + LVD+PGYG+A+ KN D W I Y+ L + LL+D R Sbjct: 73 ELRERVDGESTRHPVYLVDLPGYGFAKTGGKNRDLWSRFIGDYIQSSKRLVLLCLLVDLR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 H +D + +++L + QIV TK DKL+ + Q+ L + L +PT + + Sbjct: 133 HPGLYLDGEAYAWLRNNDIPLQIVCTKSDKLNQSEKQKNLNEINRL---FPTEYA-ALAY 188 Query: 192 SSVKRKG 198 SS+K +G Sbjct: 189 SSLKGQG 195 >gi|60681583|ref|YP_211727.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis NCTC 9343] gi|81315351|sp|Q5LDL2|ENGB_BACFN RecName: Full=Probable GTP-binding protein EngB gi|60493017|emb|CAH07797.1| putative GTP-binding cell division protein [Bacteroides fragilis NCTC 9343] Length = 201 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 99/188 (52%), Gaps = 12/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F L NN Sbjct: 19 PAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHF-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR +K +I Y+ ER + +++LID R ++ID + + Sbjct: 70 SWYLVDLPGYGYARRGQKGQKQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG-IEVLR 203 L + + + I+ TK DKL + + +R P TSS +R G EVL Sbjct: 130 LGENGIPFAIIFTKADKLKGGRLKINISAYLRELRKQWEELPPYFITSSEERLGRTEVLN 189 Query: 204 KAILETIN 211 +E+IN Sbjct: 190 --YIESIN 195 >gi|170724428|ref|YP_001758454.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella woodyi ATCC 51908] gi|169809775|gb|ACA84359.1| GTP-binding protein HSR1-related [Shewanella woodyi ATCC 51908] Length = 219 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/172 (35%), Positives = 90/172 (52%), Gaps = 13/172 (7%) Query: 14 FLRGVPEIG----LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP EIAF+GRSN GKSS +N+L ++K LARTS PGRTQ +N Sbjct: 8 FLISAPDIAHLNQYLPGDAGVEIAFAGRSNAGKSSALNMLTDQKGLARTSKTPGRTQLIN 67 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD+PGYG+A+ P W + YL ER L V +L+D Sbjct: 68 VFELDEHRR---------LVDLPGYGFAQVPLALKKKWQYALGEYLQERQCLTGVVVLMD 118 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 RH +K +D + + + + +LTK DK+ + + + + + + +Y Sbjct: 119 IRHPLKDLDMQMIEWAVESEIPVLALLTKADKMKQSERMKMINEVRKHLGDY 170 >gi|253680894|ref|ZP_04861697.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum D str. 1873] gi|253562743|gb|EES92189.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum D str. 1873] Length = 196 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/156 (39%), Positives = 84/156 (53%), Gaps = 15/156 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P E+AF GRSN GKS+LIN + NRK LA+TS+ PG+T+ +NFF + DF Sbjct: 19 PTDNRIEMAFVGRSNAGKSTLINTITNRKKLAKTSSTPGKTRLINFFLINNDF------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD+PGYG+A+ K WG ++ YL R L+ + LL+D RH + D ++ Sbjct: 72 ---YFVDLPGYGFAKVSKSEQQKWGSMMETYLVNRPQLKKIVLLVDSRHKPTKDDVQMYE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 ++ IV TK DKL Q K K +IR Sbjct: 129 WIKYYGYEAIIVATKSDKLKKNDFQ----KNKKIIR 160 >gi|108761214|ref|YP_631233.1| putative GTP-binding protein YihA [Myxococcus xanthus DK 1622] gi|119369219|sp|Q1D7Z0|ENGB_MYXXD RecName: Full=Probable GTP-binding protein EngB gi|108465094|gb|ABF90279.1| putative GTP-binding protein YihA [Myxococcus xanthus DK 1622] Length = 206 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 101/189 (53%), Gaps = 9/189 (4%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P E+AF GRSNVGKSS+IN L R+ L R SN PGRT+ LNFF V + +++ + Sbjct: 20 PTDHTAEVAFVGRSNVGKSSMINALTGRRKLVRVSNTPGRTRTLNFFDVDLERGGVRHQI 79 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L D+PGYG+A+A K + W +I YL +R L V ++D G D Sbjct: 80 ---RLADLPGYGFAKASKADKAQWEKMITTYLEKRHRLEAVVSIVDVEVGPTPDDLTTLD 136 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI-PTSSVKRKGIEVL 202 +L +V TK+D+L+ + L + L+ + P EVI P SS ++ G++ + Sbjct: 137 YLQAHNRRVLVVATKVDRLTKARLKPRLVELSKLM-DLPL---EVILPFSSTEKLGVDEV 192 Query: 203 RKAILETIN 211 A+L+T Sbjct: 193 WGALLDTFG 201 >gi|77456283|ref|YP_345788.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas fluorescens Pf0-1] gi|119369235|sp|Q3KKA7|ENGB_PSEPF RecName: Full=Probable GTP-binding protein EngB gi|77380286|gb|ABA71799.1| putative GTP-binding protein [Pseudomonas fluorescens Pf0-1] Length = 214 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFKL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 75 DDERRL---------VDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDQVTIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|237736667|ref|ZP_04567148.1| GTP-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229420529|gb|EEO35576.1| GTP-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 201 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/146 (39%), Positives = 88/146 (60%), Gaps = 12/146 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALV 89 E AF GRSNVGKSSLIN + RK LA+TS PGRTQ +N+F V +F +V Sbjct: 26 EFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQLINYFKVNNEF----------YIV 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ PK+ WG + RY++ + + V++L+D R + D ++ +LD Sbjct: 76 DLPGYGFAKVPKEMKAEWGKTMERYVAS-ARKKLVFVLLDIRRIPSEEDMEMLVWLDHHD 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTK 175 + ++I+ TK+DK+S + L+ K Sbjct: 135 IPFKIIFTKMDKVSNNEKFKCLKDIK 160 >gi|310778381|ref|YP_003966714.1| ribosome biogenesis GTP-binding protein YsxC [Ilyobacter polytropus DSM 2926] gi|309747704|gb|ADO82366.1| ribosome biogenesis GTP-binding protein YsxC [Ilyobacter polytropus DSM 2926] Length = 196 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/158 (38%), Positives = 93/158 (58%), Gaps = 18/158 (11%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + KSA +F + PE + E AF GRSNVGKSSLIN + R+ LA+TS PGRTQ Sbjct: 8 YVKSA-VFEKDYPE-----EVASYEFAFVGRSNVGKSSLINSITGRRKLAKTSKTPGRTQ 61 Query: 67 HLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 +N+F + K+F VD+PGYG+A+ PK + WG + YL+ + + V+ Sbjct: 62 LINYFIINKEF----------FFVDLPGYGFAKVPKIMKEEWGKTMETYLAS-ARQKLVF 110 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +L+D R + D ++ +L+ + ++I+ TK+DKLS Sbjct: 111 VLLDIRRIPSEDDINMLKWLEHYEIPFKIIFTKVDKLS 148 >gi|293373048|ref|ZP_06619417.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD CMC 3f] gi|292632116|gb|EFF50725.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD CMC 3f] Length = 201 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 14/184 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMAL 88 PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N F + K++ L Sbjct: 24 PEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINHFLINKNW----------YL 73 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYAR +K D +I Y+ ER + +++LID R ++ID + +L + Sbjct: 74 VDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGEN 133 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + I+ TK DKL + + + L + + P + +S + I++L + Sbjct: 134 GIPFSIIFTKADKLKGGRLKMNINAYLRELSKQWEELPPHFVSSSEDRTGRIDILN--YI 191 Query: 208 ETIN 211 E IN Sbjct: 192 ENIN 195 >gi|222528931|ref|YP_002572813.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor bescii DSM 6725] gi|222455778|gb|ACM60040.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725] Length = 204 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 77/134 (57%), Gaps = 10/134 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ GRSNVGKSS IN + K LA+ + PG+T+ +NFF N+ N +V Sbjct: 26 PEMCICGRSNVGKSSFINAVFKDK-LAKVGSTPGKTRTINFF------NIDNKF---RVV 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA K+ W +I YL ER L+ LL+D RH + D+ + F DKK Sbjct: 76 DLPGYGYAEVSKEEKRRWRTMIEEYLLERQELKLSVLLLDSRHLPTEDDKIMLGFFDKKE 135 Query: 150 VSYQIVLTKIDKLS 163 + IVLTK DKLS Sbjct: 136 IPIMIVLTKCDKLS 149 >gi|325290591|ref|YP_004266772.1| GTP-binding protein engB [Syntrophobotulus glycolicus DSM 8271] gi|324965992|gb|ADY56771.1| GTP-binding protein engB [Syntrophobotulus glycolicus DSM 8271] Length = 217 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 79/143 (55%), Gaps = 13/143 (9%) Query: 25 PKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 P+ PP E+A +GRSNVGKSSLIN +NRKN+AR PG+TQ +NFF D Sbjct: 15 PEQYPPGVSMELAVAGRSNVGKSSLINKFLNRKNMARVGQTPGKTQAINFFHIND----- 69 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVD+PGYGYA+ + WG ++ Y +R L V L+D RH + D+ Sbjct: 70 ----EWYLVDLPGYGYAKVSLEVKARWGRMMQTYFQKRGNLLGVIQLVDIRHKPTEDDKT 125 Query: 141 VFSFLDKKAVSYQIVLTKIDKLS 163 + L + + +V TK DKLS Sbjct: 126 MVKMLRDRGIPMLLVATKADKLS 148 >gi|317153283|ref|YP_004121331.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio aespoeensis Aspo-2] gi|316943534|gb|ADU62585.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio aespoeensis Aspo-2] Length = 212 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/148 (39%), Positives = 87/148 (58%), Gaps = 8/148 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ + EI L P+IA +GRSNVGKSSL+N L RK+LA+ S+ PG+T+ LN++ Sbjct: 7 LVKTIYEIKQLESLDEPQIALAGRSNVGKSSLVNRLAGRKSLAKISSKPGKTRSLNYY-- 64 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N LVD+PGYGYAR + + WG LI Y++ L+ V +L+D R Sbjct: 65 ------RVNPDGFYLVDLPGYGYARCSQSEREKWGKLIEAYMTANPGLKAVVVLLDARLT 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 +++D ++ S+L + VLTK DK Sbjct: 119 PQKLDLELTSYLRGLGIPVIPVLTKSDK 146 >gi|298373028|ref|ZP_06983018.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroidetes oral taxon 274 str. F0058] gi|298275932|gb|EFI17483.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroidetes oral taxon 274 str. F0058] Length = 200 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/188 (35%), Positives = 102/188 (54%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P+ E+AF GRSNVGKSSLIN L +K+LA+TS+ PG+T +N F + K F Sbjct: 19 PQGDTTEVAFIGRSNVGKSSLINYLTGKKDLAKTSSKPGKTLLINHFLINKRFH------ 72 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +VD+PGYG+A+ K + + +I Y+ R L +++L+D R + ID + Sbjct: 73 ----IVDLPGYGFAKVSKTHREKLRKIIEDYIMFRPQLANLFVLLDSRLSPQAIDLEFME 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L V + IV TK DK S + + +E + + + P + TSS KR+G R Sbjct: 129 WLGLGGVPFSIVFTKTDKQSRSRLMQNIETYRTKLYETWESLPPIFMTSSEKREG----R 184 Query: 204 KAILETIN 211 + IL+ I Sbjct: 185 EEILDYIE 192 >gi|157737227|ref|YP_001489910.1| putative ATP /GTP binding protein [Arcobacter butzleri RM4018] gi|166920108|sp|A8ETG7|ENGB_ARCB4 RecName: Full=Probable GTP-binding protein EngB gi|157699081|gb|ABV67241.1| putative ATP /GTP binding protein [Arcobacter butzleri RM4018] Length = 200 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 105/198 (53%), Gaps = 17/198 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ + P E+AF GRSNVGKSS++N L +R LA++S+ PG+TQ +N+F Sbjct: 8 FLQSAQSVNDSPAPNVAEVAFLGRSNVGKSSILNSLTSRNGLAKSSSTPGKTQLINYFEI 67 Query: 74 KDFSNLKNNLPAM--ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 K F P + VD+PG+GYA+ K W + YL R L+ LID R Sbjct: 68 K-FKTKNEETPYLFARFVDLPGFGYAKVAKSLKAEWNKNLTGYLQLRPNLQIFVHLIDSR 126 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIV---LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 H +ID++V FL + QI+ TKIDKL+ + L K K R+YP Sbjct: 127 HPELEIDKNVDEFLKEIKRGDQIIVNAFTKIDKLNSS----ELSKLK---RDYPDG---- 175 Query: 189 IPTSSVKRKGIEVLRKAI 206 I S++K++GI L+ I Sbjct: 176 IFLSNLKKRGIIDLQDKI 193 >gi|163748903|ref|ZP_02156155.1| GTP-binding protein [Shewanella benthica KT99] gi|161331677|gb|EDQ02482.1| GTP-binding protein [Shewanella benthica KT99] Length = 239 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 18/202 (8%) Query: 14 FLRGVPEIG----LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP EIAF+GRSN GKSS +N+L ++K+LARTS PGRTQ +N Sbjct: 23 FLISAPDIAHLNEYLPGDAGIEIAFAGRSNAGKSSALNLLTDQKSLARTSKTPGRTQLIN 82 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD+PGYG+A+ P + W + YL ER L + +L+D Sbjct: 83 VFELDEHRR---------LVDLPGYGFAQVPLALKNKWQKSLGEYLQERQCLGGMVVLMD 133 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +D + + + + +LTK DK+ + + + + + + ++ +V Sbjct: 134 IRHPLKDLDMQMIEWAVESDIPVLALLTKADKMKQSERMKMVNEVRKHLGDFDD-RVKVE 192 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 P SS+K G + +L+ +N Sbjct: 193 PFSSLKGIG----KAKVLDILN 210 >gi|330806701|ref|YP_004351163.1| GTP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|253559452|gb|ACT32413.1| putative GTP-binding protein EngB [Pseudomonas fluorescens] gi|327374809|gb|AEA66159.1| Putative GTP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 213 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFKL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 75 DDERRL---------VDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDAITIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|331270301|ref|YP_004396793.1| HSR1-like GTP-binding protein [Clostridium botulinum BKT015925] gi|329126851|gb|AEB76796.1| GTP-binding protein, HSR1-related protein [Clostridium botulinum BKT015925] Length = 197 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 84/150 (56%), Gaps = 15/150 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALV 89 E+AF GRSN GKS+LIN + NRK LA+TS+ PG+T+ +NFF + DF V Sbjct: 25 EMAFVGRSNAGKSTLINTITNRKKLAKTSSTPGKTRLINFFLINNDF----------YFV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ K WG ++ YL R L+ + LL+D RH + D ++ ++ Sbjct: 75 DLPGYGFAKVSKSEQQKWGSMMETYLVNRPQLKKIVLLVDSRHKPTKDDVQMYEWIKYYG 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 IV TK DKL + +K K +IR Sbjct: 135 YEAIIVATKSDKLK----KNDFQKNKKIIR 160 >gi|312127981|ref|YP_003992855.1| ribosome biogenesis gtp-binding protein ysxc [Caldicellulosiruptor hydrothermalis 108] gi|311778000|gb|ADQ07486.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor hydrothermalis 108] Length = 204 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 77/134 (57%), Gaps = 10/134 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ GRSNVGKSS IN + K LA+ + PG+T+ +NFF N+ N +V Sbjct: 26 PEMCICGRSNVGKSSFINAVFKDK-LAKVGSTPGKTRTINFF------NIDNKF---RVV 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA K+ W +I YL ER L+ LL+D RH + D+ + F DKK Sbjct: 76 DLPGYGYAEVSKEEKRRWRTMIEEYLLERQELKLSVLLLDSRHLPTEDDKIMLGFFDKKE 135 Query: 150 VSYQIVLTKIDKLS 163 + IVLTK DKLS Sbjct: 136 IPIMIVLTKCDKLS 149 >gi|15895894|ref|NP_349243.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium acetobutylicum ATCC 824] gi|24418388|sp|Q97FU0|ENGB_CLOAB RecName: Full=Probable GTP-binding protein EngB gi|15025663|gb|AAK80583.1|AE007761_2 Predicted GTPase, YSXC B.subtilis ortholog [Clostridium acetobutylicum ATCC 824] gi|325510046|gb|ADZ21682.1| GTPase EngB [Clostridium acetobutylicum EA 2018] Length = 200 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 70/192 (36%), Positives = 96/192 (50%), Gaps = 17/192 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNN 82 P G EIAF GRSNVGKSSLIN + NR+ L + S PG+T+ +NFF + DF Sbjct: 18 FPIDGKDEIAFVGRSNVGKSSLINAITNRRKLVKVSGTPGKTRLVNFFMINNDF------ 71 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 VD+PGYGYA+ KK ++ W I YL R L+ V LL+D RH + D ++ Sbjct: 72 ----YFVDLPGYGYAKVSKKELEKWSQTIEGYLVGREQLKKVILLVDSRHKPTKDDITMY 127 Query: 143 SFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 +++ ++ TK DK+ S E L K + E SS ++G + Sbjct: 128 NWIKYYDYKCIVIATKSDKIKRSEKVKNEKLIKETLKFND----SDEFYFFSSATKQGRD 183 Query: 201 VLRKAILETINY 212 L I INY Sbjct: 184 ELINNICSGINY 195 >gi|330501085|ref|YP_004377954.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas mendocina NK-01] gi|328915371|gb|AEB56202.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas mendocina NK-01] Length = 216 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P+ E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FLISAAKVDQCPEDSGLEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFRL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L + L++D RH Sbjct: 75 DDERRL---------VDLPGYGYAKVPIPLKQHWQKHLEAYLGSRESLCGLVLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + D + + + I+LTK DKL+ A+ L K + IR + S+ Sbjct: 126 LTEFDCMMLDWSVASGMPLHILLTKADKLAFGAAKNALLKVRQDIRKQWGEGISIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGVE 192 >gi|160886050|ref|ZP_02067053.1| hypothetical protein BACOVA_04056 [Bacteroides ovatus ATCC 8483] gi|156108863|gb|EDO10608.1| hypothetical protein BACOVA_04056 [Bacteroides ovatus ATCC 8483] Length = 201 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 14/184 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMAL 88 PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N F + K++ L Sbjct: 24 PEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINHFLINKNW----------YL 73 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYAR +K D +I Y+ ER + +++LID R ++ID + +L + Sbjct: 74 VDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGEN 133 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + I+ TK DKL + + + L + + P + +S + I++L + Sbjct: 134 GIPFSIIFTKADKLKGGRLKMNINAYLRELGKQWEELPPHFVSSSEDRTGRIDILN--YI 191 Query: 208 ETIN 211 E IN Sbjct: 192 ENIN 195 >gi|254483342|ref|ZP_05096573.1| putative GTPase [marine gamma proteobacterium HTCC2148] gi|214036437|gb|EEB77113.1| putative GTPase [marine gamma proteobacterium HTCC2148] Length = 184 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/178 (37%), Positives = 96/178 (53%), Gaps = 20/178 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +AF+GRSN GKSS IN L N K LA+TS PGRTQ +NFF + S + LVD+ Sbjct: 1 MAFAGRSNAGKSSAINSLTNNKKLAKTSKTPGRTQLINFF---ELST------SQRLVDL 51 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYG+A+ P W + YL++R LR + LL+D RH ++ D+ + ++ + Sbjct: 52 PGYGFAKVPVAVKKEWTKQLENYLAKRQCLRGMILLMDVRHPLQPFDEQMLNWALTAHMP 111 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT---SSVKRKG----IEVL 202 I+LTK DKL A +L +R AH ++ S++K G +EVL Sbjct: 112 VHILLTKADKLKKGPANNSL----LGVRKAMKAHEALVSVQLFSALKHSGHQQLVEVL 165 >gi|297621917|ref|YP_003710054.1| GTP-binding protein EngB [Waddlia chondrophila WSU 86-1044] gi|297377218|gb|ADI39048.1| GTP-binding protein EngB [Waddlia chondrophila WSU 86-1044] Length = 198 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 92/181 (50%), Gaps = 12/181 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIA GRSNVGKSSL+N L RK L + S+ PG+T LNFF ++F A V Sbjct: 30 PEIAVLGRSNVGKSSLLNHLFQRKGLVKASSKPGKTAALNFFSIENFC---------AFV 80 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PGYG+A P WG ++ YL R L+ V L D R + D + +L + Sbjct: 81 DFPGYGFADVPLHVKKQWGPMVQSYLENRKELKLVLFLFDIRRTPNEEDLALVQWLLNEQ 140 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +VLTK DKL+ + E + TK ++ + + S K +G L K I ET Sbjct: 141 VPTILVLTKSDKLNQS---EKHQNTKKILEAFGFEKFSYLLYSVPKNRGRNTLMKLIEET 197 Query: 210 I 210 + Sbjct: 198 L 198 >gi|315636942|ref|ZP_07892166.1| ribosome biogenesis GTP-binding protein YsxC [Arcobacter butzleri JV22] gi|315478772|gb|EFU69481.1| ribosome biogenesis GTP-binding protein YsxC [Arcobacter butzleri JV22] Length = 200 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 105/198 (53%), Gaps = 17/198 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ + P E+AF GRSNVGKSS++N L +R LA++S+ PG+TQ +N+F Sbjct: 8 FLQSAQSVNDSPAPNVAEVAFLGRSNVGKSSILNSLTSRNGLAKSSSTPGKTQLINYFEI 67 Query: 74 KDFSNLKNNLPAM--ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 K F P + VD+PG+GYA+ K W + YL R L+ LID R Sbjct: 68 K-FKTKNEETPYLFARFVDLPGFGYAKVAKSLKAEWNKNLTGYLQLRPNLQIFVHLIDSR 126 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIV---LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 H +ID++V FL + QI+ TKIDKL+ + L K K R+YP Sbjct: 127 HPDLEIDKNVDEFLKEIKRGDQIIVNAFTKIDKLNSS----ELSKLK---RDYPDG---- 175 Query: 189 IPTSSVKRKGIEVLRKAI 206 I S++K++GI L+ I Sbjct: 176 IFLSNLKKRGIIDLQDKI 193 >gi|50365173|ref|YP_053598.1| GTPase EngB [Mesoplasma florum L1] gi|81827302|sp|Q6F1A9|ENGB_MESFL RecName: Full=Probable GTP-binding protein EngB gi|50363729|gb|AAT75714.1| GTP-binding protein, endoglucanase/xylanase [Mesoplasma florum L1] Length = 198 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/184 (36%), Positives = 93/184 (50%), Gaps = 32/184 (17%) Query: 1 MVSHTIFTKSA-----WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNL 55 M ++F KSA WI + PE+ F GRSNVGKSS IN L N K L Sbjct: 1 MFKQSVFIKSAANKSGWI------------EDNIPEVCFVGRSNVGKSSFINTLANNKKL 48 Query: 56 ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL 115 A+ +N PG+T+ LNFF D +N + LVD PGYGYA+ +G ++ YL Sbjct: 49 AKVANTPGKTRLLNFF---DINN-----SSFRLVDAPGYGYAKISNSMKVEFGIMMEDYL 100 Query: 116 SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL-------SPTTAQ 168 + R L+ V +L+D RH D ++ FL + ++ TK+DKL + + Sbjct: 101 TTRENLKLVCMLVDLRHKPTNDDVQMYDFLKANDIPVLMIGTKLDKLKRNEIAKNEKLIK 160 Query: 169 ETLE 172 ETLE Sbjct: 161 ETLE 164 >gi|114565094|ref|YP_752608.1| GTPase EngB [Shewanella frigidimarina NCIMB 400] gi|119369253|sp|Q07W45|ENGB_SHEFN RecName: Full=Probable GTP-binding protein EngB gi|114336387|gb|ABI73769.1| cell division checkpoint GTPase YihA [Shewanella frigidimarina NCIMB 400] Length = 224 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 62/172 (36%), Positives = 91/172 (52%), Gaps = 13/172 (7%) Query: 14 FLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I L + P EIAF+GRSN GKSS +N L +K+LARTS PGRTQ +N Sbjct: 13 FLISAPDIAHLDQYLPGDIGVEIAFAGRSNAGKSSALNALTEQKSLARTSKTPGRTQLIN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F D L VD+PGYG+A+ P W + YL +R+ L V +L+D Sbjct: 73 VFQLDDDRRL---------VDLPGYGFAQVPLALKHKWQEALGEYLQKRACLSGVVVLMD 123 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 RH +K +D + + + +LTK DKL+ + +T+ + ++ + Sbjct: 124 IRHPLKDLDMQMIEWAVLSNIPVLALLTKSDKLTQSVKMKTVNDVRAALKEF 175 >gi|226311385|ref|YP_002771279.1| GTP-binding protein EngB [Brevibacillus brevis NBRC 100599] gi|226094333|dbj|BAH42775.1| probable GTP-binding protein EngB [Brevibacillus brevis NBRC 100599] Length = 215 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 79/139 (56%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G EIA GRSNVGKSSL+N ++NRK LAR S+ PG+TQ LN+F Sbjct: 19 PTDGLHEIALVGRSNVGKSSLLNKMMNRKGLARISSRPGKTQTLNYFRVNQM-------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD PGYGYA+ K + WG +I YL R+ LR + L+D RH + D ++ + Sbjct: 71 -LYFVDFPGYGYAKVAKTIKEQWGKMIEGYLKNRNELRFIIQLVDIRHAPSKDDIAMYDW 129 Query: 145 LDKKAVSYQIVLTKIDKLS 163 + + +V TK DK++ Sbjct: 130 CKQIGLPTVVVATKGDKIA 148 >gi|308051441|ref|YP_003915007.1| cell division checkpoint GTPase YihA [Ferrimonas balearica DSM 9799] gi|307633631|gb|ADN77933.1| cell division checkpoint GTPase YihA [Ferrimonas balearica DSM 9799] Length = 212 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 9/162 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L + LA TS PGRTQ +N F Sbjct: 13 FVTSAPDIHHLPPDEGVEIAFAGRSNAGKSSALNTLTDHNGLAHTSKRPGRTQLINVFSL 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYG+A+ P + W + YL R L+ + +L+D RH Sbjct: 73 TEDKRL---------VDLPGYGFAKVPLEMKIKWQQALAEYLEHRRCLKGLVVLMDVRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +K +D ++ + + ++LTK DKL +TL K Sbjct: 124 LKDLDHNMIRWGVAAGMPVLVLLTKADKLKQAEKNKTLRHVK 165 >gi|303289114|ref|XP_003063845.1| hypothetical protein MICPUCDRAFT_53567 [Micromonas pusilla CCMP1545] gi|226454913|gb|EEH52218.1| hypothetical protein MICPUCDRAFT_53567 [Micromonas pusilla CCMP1545] Length = 526 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/179 (37%), Positives = 91/179 (50%), Gaps = 12/179 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIA GRSNVGKSSL+N+L RK++A+TS PG+TQ +N F + LV Sbjct: 335 PEIAVIGRSNVGKSSLVNLLTGRKDVAKTSKNPGKTQTINHF------EMITGDGKWYLV 388 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A AP++ W YL ER L V LLID +++D + FL + Sbjct: 389 DLPGYGFANAPERLRKKWALFTREYLLERENLLAVMLLIDSTVEPQRLDLECLEFLGEND 448 Query: 150 VSYQIVLTKIDKLSPTTA------QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + IV TK+DK + +E +E + Y P +I TSS G L Sbjct: 449 IPVSIVFTKVDKKRKVKSGKRAKPEENVEAFCREVSEYWEEMPPMIFTSSKTGDGKAAL 507 >gi|255658242|ref|ZP_05403651.1| ribosome biogenesis GTP-binding protein YsxC [Mitsuokella multacida DSM 20544] gi|260849552|gb|EEX69559.1| ribosome biogenesis GTP-binding protein YsxC [Mitsuokella multacida DSM 20544] Length = 234 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 69/192 (35%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-----VPKDFSNL 79 P+ PE+ F GRSNVGKSSLIN L + LAR S+ PG+TQ +NFF + S Sbjct: 46 PERELPEVVFIGRSNVGKSSLINSLTRIRGLARVSSQPGKTQTINFFELTAKLRDPESGE 105 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + LVD+PGYGYA+ K+ W I YL L+ V LID RH D Sbjct: 106 EQGRKDFYLVDLPGYGYAKTGKERRKIWKKFIDEYLLTSPQLQFVCQLIDIRHEPMASDV 165 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG- 198 ++F +L + V I+ TK DK+ Q+ + + R ++P SSVK +G Sbjct: 166 EMFQWLVEHHVPVLIIATKADKIGKNARQKNIAAIR---RALGVKEISILPYSSVKNEGR 222 Query: 199 ---IEVLRKAIL 207 ++V+R+ ++ Sbjct: 223 SDLLDVIREILV 234 >gi|71893797|ref|YP_279243.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma hyopneumoniae J] Length = 184 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 86/169 (50%), Gaps = 14/169 (8%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FLR PE P+ AF GRSNVGKS+LIN L N+K +A+TS PGRTQ LNF+ Sbjct: 10 WKFLRSCPENCY----SDPQFAFIGRSNVGKSTLINALANKK-IAKTSTKPGRTQLLNFY 64 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N VD+PGYGYA K D +I Y + + V+L++D R Sbjct: 65 ---------KNESEKLFVDLPGYGYAAVSKTKKDQIDRIIAGYFQKDQPISAVFLILDAR 115 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 G +D + ++ K+ I+ KIDK + +T L + K L N Sbjct: 116 VGFTNLDYIMIEYIIKQGFKLHILANKIDKTNQSTRAILLNQCKKLKLN 164 >gi|237716335|ref|ZP_04546816.1| GTPase EngB [Bacteroides sp. D1] gi|262407938|ref|ZP_06084486.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_22] gi|294646716|ref|ZP_06724339.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD CC 2a] gi|294807755|ref|ZP_06766548.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides xylanisolvens SD CC 1b] gi|229443982|gb|EEO49773.1| GTPase EngB [Bacteroides sp. D1] gi|262354746|gb|EEZ03838.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_22] gi|292637876|gb|EFF56271.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD CC 2a] gi|294445191|gb|EFG13865.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides xylanisolvens SD CC 1b] Length = 201 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 14/184 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMAL 88 PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N F + K++ L Sbjct: 24 PEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINHFLINKNW----------YL 73 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYAR +K D +I Y+ ER + +++LID R ++ID + +L + Sbjct: 74 VDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGEN 133 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + I+ TK DKL + + + L + + P + +S + +++L + Sbjct: 134 GIPFSIIFTKADKLKGGRLKMNINAYLRELGKQWEELPPHFVSSSEDRTGRVDILN--YI 191 Query: 208 ETIN 211 E IN Sbjct: 192 ENIN 195 >gi|217077841|ref|YP_002335559.1| protein containing GTP binding domain [Thermosipho africanus TCF52B] gi|226741184|sp|B7IDZ1|ENGB_THEAB RecName: Full=Probable GTP-binding protein EngB gi|217037696|gb|ACJ76218.1| protein containing GTP binding domain [Thermosipho africanus TCF52B] Length = 194 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 66/186 (35%), Positives = 109/186 (58%), Gaps = 21/186 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ E F GRSNVGKS+L+NIL R N+A+TS PG+T +NF+ + Sbjct: 20 PESLNGEFVFVGRSNVGKSTLLNILTGR-NIAKTSKKPGKTASINFYKINN--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYGYA+ + W +I Y S+R+ ++ V++LID RH +++ D+ + Sbjct: 70 SFYFVDLPGYGYAKVSVEERARWRKIIENYFSKRAWNIKLVFVLIDGRHELQKNDEILLE 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE---VIPTSSVKRKGIE 200 +L + + + IV+TK+DKL + E+ K +IR Y + E +IP S++ R+GI+ Sbjct: 130 WLKELELDFAIVMTKMDKLKNS------ERAK-MIRYYKDLYGENYTIIPYSAITREGID 182 Query: 201 VLRKAI 206 + + I Sbjct: 183 KIYELI 188 >gi|295084381|emb|CBK65904.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Bacteroides xylanisolvens XB1A] Length = 201 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 11/134 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMAL 88 PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N F + K++ L Sbjct: 24 PEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINHFLINKNW----------YL 73 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYAR +K D +I Y+ ER + +++LID R ++ID + +L + Sbjct: 74 VDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGEN 133 Query: 149 AVSYQIVLTKIDKL 162 + + I+ TK DKL Sbjct: 134 GIPFSIIFTKADKL 147 >gi|293401437|ref|ZP_06645580.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305075|gb|EFE46321.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 196 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 11/185 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+ P+ PEI +GRSNVGKSS IN + RK LA N PG+T+ LNFF Sbjct: 13 APDKKSWPETDLPEIVLAGRSNVGKSSFINTMCGRKKLAYVGNTPGKTRLLNFF------ 66 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 NL + VD+PGYGYA K + +G ++ Y +ER + + +L+D RH + Sbjct: 67 NLDDKY---MFVDVPGYGYANISKAQLLKFGEMMEDYFAERKQKKGLVILVDARHKPTED 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F + +V TK DKL T + L+ + ++ H + P S+ K+ Sbjct: 124 DITMLEFARYYEIPVAVVATKTDKLPSTKLKNQLKMIRKELQ--LNDHEPLFPFSAEKKT 181 Query: 198 GIEVL 202 G+E + Sbjct: 182 GMEAV 186 >gi|194430709|ref|ZP_03063138.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B171] gi|194411246|gb|EDX27639.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B171] Length = 197 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 101/212 (47%), Gaps = 18/212 (8%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M H F KS + ++ LP PEIAF GRSNVGKSSLIN +NRK +A+ S+ Sbjct: 1 MFKHIEFVKSVF-------KLEDLPPPEFPEIAFLGRSNVGKSSLINAFLNRKKVAKVSS 53 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG T+ LNFF DF LVD+PGYG+A+ P + W L+ YL Sbjct: 54 TPGFTKALNFFR-IDFK--------FYLVDLPGYGFAKVPVEVKKHWQYLVEGYLKAVRD 104 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 R + L+ D R + D + F+ + IVL KID LS + + + Y Sbjct: 105 FRNLVLIFDIRRNPDEADIQLVEFVKHLKKPHCIVLNKIDTLSFREVER--QASVYQKTF 162 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 P + S + KGI LR +L + + Sbjct: 163 KPNPETPLFLISCKESKGIPQLRSHLLSCLGF 194 >gi|120609677|ref|YP_969355.1| ribosome biogenesis GTP-binding protein YsxC [Acidovorax citrulli AAC00-1] gi|120588141|gb|ABM31581.1| GTP-binding protein [Acidovorax citrulli AAC00-1] Length = 253 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 98/191 (51%), Gaps = 15/191 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LP PE AF GRSN GKS+ IN L +K LA S PGRTQH+N F Sbjct: 31 FLTTAAQLHHLPAIHVPEFAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINLFAL 90 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + L D+PGYGYA + + W ++V YL R +L + LL D R G Sbjct: 91 G-----RQGVTDAVLADLPGYGYAAVSRSDKQRWQQVMVNYLVSRESLTGIVLLCDPRLG 145 Query: 134 VKQIDQDVFSFLDKK---AVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVI 189 + ++D+ + + + + + ++LTK DKL+ E+ K L I EV Sbjct: 146 LTELDEALLEAVRPRVEAGLKFLVLLTKADKLT------RAEQAKVLSITRLQAGGGEVK 199 Query: 190 PTSSVKRKGIE 200 S++K++G++ Sbjct: 200 MFSALKKQGVD 210 >gi|255008962|ref|ZP_05281088.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis 3_1_12] gi|313146704|ref|ZP_07808897.1| GTPase EngB [Bacteroides fragilis 3_1_12] gi|313135471|gb|EFR52831.1| GTPase EngB [Bacteroides fragilis 3_1_12] Length = 201 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F L NN Sbjct: 19 PAGTFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTMLINHF-------LINN-- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR +K + +I Y+ ER + +++LID R ++ID + + Sbjct: 70 SWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDIEFMEW 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + + + I+ TK DKL Sbjct: 130 LGENGIPFSIIFTKADKL 147 >gi|258405422|ref|YP_003198164.1| ribosome biogenesis GTP-binding protein YsxC [Desulfohalobium retbaense DSM 5692] gi|257797649|gb|ACV68586.1| ribosome biogenesis GTP-binding protein YsxC [Desulfohalobium retbaense DSM 5692] Length = 205 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 8/138 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P P++A +GRSNVGKSSLIN L RK LA+ S+ PG+T+ LNF+ + Sbjct: 16 FPSLDVPQVALAGRSNVGKSSLINALAGRKKLAKISSTPGKTRSLNFY--------RAAG 67 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ K W L+ Y + + L+ V +L+D R +++D ++ S Sbjct: 68 DGFYLVDLPGYGYAKRSKTERGQWAALMDVYFQKSTGLQAVVVLLDSRLPPQKLDLELIS 127 Query: 144 FLDKKAVSYQIVLTKIDK 161 FL ++++ LTK DK Sbjct: 128 FLQRESIPLIAALTKADK 145 >gi|212702990|ref|ZP_03311118.1| hypothetical protein DESPIG_01028 [Desulfovibrio piger ATCC 29098] gi|212673578|gb|EEB34061.1| hypothetical protein DESPIG_01028 [Desulfovibrio piger ATCC 29098] Length = 222 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 96/180 (53%), Gaps = 18/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMAL 88 ++A +GRSNVGKSSLIN L RK LA+ S PG+T+ +NF+ P +F L Sbjct: 23 QVALAGRSNVGKSSLINALAVRKKLAKVSATPGKTRSINFYRVQPHNFF----------L 72 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYARA SW L+ +YLS LR + LL+D R +++D D+ F Sbjct: 73 VDLPGYGYARASHSERRSWATLLEKYLSTCKNLRALALLLDSRLPPQKLDLDLAGFARSC 132 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +LTK DK + + ++ P + TSS KR G++ L + ++E Sbjct: 133 GLPLLPILTKADKCNQRERAARQAEWGEIVGVKP------VITSSSKRMGMDALWQRLIE 186 >gi|302563889|ref|NP_001181249.1| GTP-binding protein 8 [Macaca mulatta] Length = 284 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 72/181 (39%), Positives = 99/181 (54%), Gaps = 19/181 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAM 86 PE+ F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 111 PEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFT--------- 161 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VDMPGYGY RAP+ VD ++ YL ER L+ +LL+D G+++ D + Sbjct: 162 -VVDMPGYGY-RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCE 215 Query: 147 KKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + A+ Y IVLTKIDK S ++ L+ K++ P++ P SSV GI +LR Sbjct: 216 EFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNTKTQGCFPQLFPVSSVTFSGIHLLRSF 275 Query: 206 I 206 I Sbjct: 276 I 276 >gi|241889982|ref|ZP_04777280.1| ribosome biogenesis GTP-binding protein YsxC [Gemella haemolysans ATCC 10379] gi|241863604|gb|EER67988.1| ribosome biogenesis GTP-binding protein YsxC [Gemella haemolysans ATCC 10379] Length = 198 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/175 (40%), Positives = 95/175 (54%), Gaps = 13/175 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PE+A GRSNVGKSS IN ++ RKN AR S+ PG+T+ LNFF Sbjct: 22 PEHEKPEVAMCGRSNVGKSSFINTILERKNYARVSSKPGKTRTLNFFDVD---------D 72 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K + +IV Y + L V LID RH Q D ++ F Sbjct: 73 QVVLVDVPGYGYAKLSKPEKEKLYDMIVEYFTNSENLGFVLHLIDSRHKPSQDDIEMNEF 132 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKG 198 L+ + + IV+TKIDK+S E + T + R T + +IP SSV + G Sbjct: 133 LNYYEIPFVIVMTKIDKIS---KNELAKNTGIIKRELDLTNNMAIIPFSSVTKIG 184 >gi|160902807|ref|YP_001568388.1| small GTP-binding protein [Petrotoga mobilis SJ95] gi|189037183|sp|A9BHV0|ENGB_PETMO RecName: Full=Probable GTP-binding protein EngB gi|160360451|gb|ABX32065.1| small GTP-binding protein [Petrotoga mobilis SJ95] Length = 196 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/197 (32%), Positives = 107/197 (54%), Gaps = 14/197 (7%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ V +I LP EIAF+GRSNVGKSS +N ++ K +A+ S+ PG+T+ +N+++ Sbjct: 9 IKTVYKIEDLPPPDKKEIAFAGRSNVGKSSFLNAILGIK-IAKVSSTPGKTRSINYYLVN 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D VD+PGYG+A K+ + W L+ Y R +L V LLID RH Sbjct: 68 D---------KYYFVDLPGYGFASVSKQEKERWNVLMNEYFKTRFSLSAVSLLIDHRHMP 118 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV-IPTSS 193 +++D + +L + +LTK DKL+ + + E K R++ T + +P SS Sbjct: 119 QKLDYAMVEWLKDLGTPFLFILTKSDKLTKSEKAKLFEDIK---RSFSTYGEYIYMPFSS 175 Query: 194 VKRKGIEVLRKAILETI 210 ++G++ + K I E + Sbjct: 176 KTKEGLKEVLKTIGEIL 192 >gi|294138858|ref|YP_003554836.1| GTP-binding protein EngB [Shewanella violacea DSS12] gi|293325327|dbj|BAJ00058.1| GTP-binding protein EngB [Shewanella violacea DSS12] Length = 234 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 18/202 (8%) Query: 14 FLRGVPEIG----LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP EIAF+GRSN GKSS +N++ ++K+LARTS PGRTQ +N Sbjct: 13 FLISAPDIAHLDEYLPGDAGIEIAFAGRSNAGKSSALNLITDQKSLARTSKTPGRTQLIN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD+PGYG+A+ P W + YL ER L + +L+D Sbjct: 73 VFELDEHRR---------LVDLPGYGFAQVPLALKKKWQKALGEYLQERKCLGGMVVLMD 123 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +D + + + + +LTK DK+ + + + + + + ++ +V Sbjct: 124 IRHPLKDLDMQMIEWAVESDIPVLALLTKADKMKQSERMKMVNEVRKHLADFDD-RVKVE 182 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 P SS+K G + +L+ +N Sbjct: 183 PFSSLKGIG----KAKVLDILN 200 >gi|148270457|ref|YP_001244917.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga petrophila RKU-1] gi|166232160|sp|A5IMB8|ENGB_THEP1 RecName: Full=Probable GTP-binding protein EngB gi|147736001|gb|ABQ47341.1| small GTP-binding protein [Thermotoga petrophila RKU-1] Length = 195 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 16/182 (8%) Query: 25 PKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 P PP E+AF GRSNVGKSSL+N L N+K +A S PG+T+ +NF++ Sbjct: 15 PGDYPPPLKGEVAFVGRSNVGKSSLLNALFNKK-IAFVSKTPGKTRSINFYLVNS----- 68 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 VD+PGYGYA+ KK W L+ Y R +L+ V+LL+D R + D Sbjct: 69 ----KYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDFM 124 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + ++ + + IVLTK+DK+ + + LE+ + Y +IPTSSV +GI Sbjct: 125 MIEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHQKEFSRY--GEYTIIPTSSVTGEGIS 182 Query: 201 VL 202 L Sbjct: 183 EL 184 >gi|116329485|ref|YP_799205.1| GTPase EngB [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329911|ref|YP_799629.1| GTPase EngB [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282316|sp|Q04W49|ENGB_LEPBJ RecName: Full=Probable GTP-binding protein EngB gi|122282735|sp|Q04XC3|ENGB_LEPBL RecName: Full=Probable GTP-binding protein EngB gi|116122229|gb|ABJ80272.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123600|gb|ABJ74871.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 221 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 109/187 (58%), Gaps = 11/187 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E +P G P+IAF+GRSN GKSSL+N ++ RK+LA+ S+ PG+T+ LNFF F N Sbjct: 24 EANQIPSQGIPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFF----FVN- 78 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 ++ LVD+PG+GY+ K+ ++ L++ YL+ L+C++L+ D + + + + Sbjct: 79 ----RSIYLVDLPGFGYSANSHKDHEAMMDLLMDYLNLAKDLKCLFLVCDSQRELPEEEL 134 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 ++ ++ + +V TKIDKL+ + + +K K + YP E + S+ KG+ Sbjct: 135 ELIGTCFERNIKPVLVRTKIDKLNQSDLSKLRKKMKNIHELYPML--ETVLVSNKSGKGL 192 Query: 200 EVLRKAI 206 LRK + Sbjct: 193 PELRKIV 199 >gi|29346493|ref|NP_809996.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides thetaiotaomicron VPI-5482] gi|253568103|ref|ZP_04845514.1| GTPase EngB [Bacteroides sp. 1_1_6] gi|81445016|sp|Q8A8T4|ENGB_BACTN RecName: Full=Probable GTP-binding protein EngB gi|29338389|gb|AAO76190.1| putative GTP-binding protein [Bacteroides thetaiotaomicron VPI-5482] gi|251842176|gb|EES70256.1| GTPase EngB [Bacteroides sp. 1_1_6] Length = 202 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ Sbjct: 19 PTGVFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTMLINHFLINQ--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYAR +K D +I Y+ ER + +++LID R ++ID + + Sbjct: 70 SWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEW 129 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + + + I+ TK DKL Sbjct: 130 LGENGIPFSIIFTKADKL 147 >gi|119369217|sp|Q4A9N9|ENGB_MYCHJ RecName: Full=Probable GTP-binding protein EngB gi|144227637|gb|AAZ44532.2| putative GTP-binding protein [Mycoplasma hyopneumoniae J] Length = 198 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 86/169 (50%), Gaps = 14/169 (8%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FLR PE P+ AF GRSNVGKS+LIN L N+K +A+TS PGRTQ LNF+ Sbjct: 24 WKFLRSCPE----NCYSDPQFAFIGRSNVGKSTLINALANKK-IAKTSTKPGRTQLLNFY 78 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N VD+PGYGYA K D +I Y + + V+L++D R Sbjct: 79 ---------KNESEKLFVDLPGYGYAAVSKTKKDQIDRIIAGYFQKDQPISAVFLILDAR 129 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 G +D + ++ K+ I+ KIDK + +T L + K L N Sbjct: 130 VGFTNLDYIMIEYIIKQGFKLHILANKIDKTNQSTRAILLNQCKKLKLN 178 >gi|281412764|ref|YP_003346843.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga naphthophila RKU-10] gi|281373867|gb|ADA67429.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga naphthophila RKU-10] Length = 195 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 16/182 (8%) Query: 25 PKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 P PP E+AF GRSNVGKSSL+N L N+K +A S PG+T+ +NF++ Sbjct: 15 PGDYPPPLKGEVAFVGRSNVGKSSLLNALFNKK-IAFVSKTPGKTRSINFYLVNS----- 68 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 VD+PGYGYA+ KK W L+ Y R +L+ V+LL+D R + D Sbjct: 69 ----KYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLM 124 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + ++ + + IVLTK+DK+ + + LE+ + Y +IPTSSV +GI Sbjct: 125 MVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHQKEFSRY--GEYTIIPTSSVTGEGIS 182 Query: 201 VL 202 L Sbjct: 183 EL 184 >gi|238926237|ref|ZP_04657997.1| GTPase [Selenomonas flueggei ATCC 43531] gi|238885917|gb|EEQ49555.1| GTPase [Selenomonas flueggei ATCC 43531] Length = 207 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 9/212 (4%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + TK+A +L P+ P AF GRSNVGKSSLIN L + LA S Sbjct: 1 MSEPVVITKAA--YLASAVRRDQYPEEQCPAAAFIGRSNVGKSSLINSLTRIRQLAHVSG 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ +NF+ + + LVD+PGYGYA+A +++ ++W I Y Sbjct: 59 KPGKTQTINFYELLMRIDGGEERHPVHLVDLPGYGYAKAARESRNTWAKFIEEYFLHAEN 118 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L V LL+D RH D +F +L + ++ TK DKL T Q+ L + R Sbjct: 119 LHFVALLLDIRHAPMTSDCKMFDWLVAHDIPVLVIATKADKLGRTARQKQLSLMR---RT 175 Query: 181 YPTAHPEVIPTSSVKRKG----IEVLRKAILE 208 ++P S K +G ++V+++ +LE Sbjct: 176 LGVPDLSILPYSVPKNEGRTELLDVMKEYLLE 207 >gi|195952762|ref|YP_002121052.1| small GTP-binding protein [Hydrogenobaculum sp. Y04AAS1] gi|195932374|gb|ACG57074.1| small GTP-binding protein [Hydrogenobaculum sp. Y04AAS1] Length = 184 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 20/184 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I +GRSNVGKSSLIN + N K +AR S PG T LNF++ ++ + +V Sbjct: 16 PCILLTGRSNVGKSSLINAIANTK-IARVSKDPGLTATLNFYIEEN----------IYIV 64 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PGYGYA+ K+ + W +I ++ + CV+ LID G ++D + +LD K Sbjct: 65 DTPGYGYAKRSKEERNRWANIINDFIENHGENILCVFALIDSVVGPTELDTMLIDYLDSK 124 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ +VLTKIDK + TL + K +N +I TSS GI+ L KAI++ Sbjct: 125 SLNTMLVLTKIDKATQKELANTLNRLKAFDKN-------IIQTSSKDGIGIKQL-KAIMK 176 Query: 209 TINY 212 +++ Sbjct: 177 ELSH 180 >gi|225683955|gb|EEH22239.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 303 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 86/143 (60%), Gaps = 9/143 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E +P + PE+ F GRSNVGKSSL+N L++ +++ TS+ GRT +N + Sbjct: 83 EFRTIPMSNVPEVVFLGRSNVGKSSLLNALMD-QDVCYTSSKIGRTHTINAY---GVGGR 138 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K + LVD PGYG K + + WG I++YL++R LR ++LID HG+K D+ Sbjct: 139 KAGEAQVVLVDTPGYG-----KGSHEEWGKEIIKYLTKRKQLRRTFVLIDSHHGLKPGDR 193 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 D+FS L A+ +Q++L+K D + Sbjct: 194 DIFSLLRSTAIPHQVILSKADSV 216 >gi|51891500|ref|YP_074191.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] gi|81610694|sp|Q67SJ6|ENGB_SYMTH RecName: Full=Probable GTP-binding protein EngB gi|51855189|dbj|BAD39347.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 233 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 82/169 (48%), Gaps = 24/169 (14%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--------- 72 G P+ G PE+A GRSNVGKSSLIN LV + LARTSN PGRTQ LNF+ Sbjct: 15 GQFPQDGLPEVALVGRSNVGKSSLINALVRNRKLARTSNTPGRTQALNFYRVWPQGKPRP 74 Query: 73 ------PKDFSNLKNNLP---------AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 KD + P A LVDMPGYG+AR + W LI YL Sbjct: 75 EGEPQPDKDAGRTALSGPVLQAARESGAFYLVDMPGYGFARVSEAQRREWARLIEGYLLT 134 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 R LR V ++D RH + D + ++ + V TK DK+ T Sbjct: 135 RGALRGVLQIVDLRHPPTRDDVTMREWIRHHRLPSLCVATKADKIGRTA 183 >gi|289450320|ref|YP_003475210.1| ribosome biogenesis GTP-binding protein YsxC [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184867|gb|ADC91292.1| ribosome biogenesis GTP-binding protein YsxC [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 217 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 20/190 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 P+ G PE+ +GRSN GKSSLIN L N LAR S+ PG+TQ + +F V + F Sbjct: 40 PQDGLPEVVMAGRSNAGKSSLINALANNGKLARVSSNPGKTQLVVYFNVDQKF------- 92 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L D+PGYGYAR + L Y + ++ V LLID RH + D+ + + Sbjct: 93 ---YLTDLPGYGYARISLEKRSKLSSLANSYFIDGRPIKLVLLLIDIRHLPSEQDRQMCN 149 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT---SSVKRKGIE 200 FL++ + Y +VL K DKLS A + +K E IP S+V + GI+ Sbjct: 150 FLNETEMPYVLVLNKADKLSRAQAGQNRQKI------LKALSAENIPNFIVSTVNKAGID 203 Query: 201 VLRKAILETI 210 L+ I E I Sbjct: 204 ELKNFITEHI 213 >gi|239993764|ref|ZP_04714288.1| ribosome biogenesis GTP-binding protein YsxC [Alteromonas macleodii ATCC 27126] Length = 140 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 76/131 (58%), Gaps = 9/131 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P+I L E+AF+GRSN GKSS +N L +KNLARTS PGRTQ +N F Sbjct: 9 FFTSAPDIRHLKNDTGIEVAFAGRSNAGKSSALNTLTRQKNLARTSKTPGRTQLINVF-- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+ +L LVD+PGYG+A+ P W + YL +R +L+ + +L+D RH Sbjct: 67 ----ELEEDL---RLVDLPGYGFAKVPVAMKKKWQASLGEYLQKRKSLKGLVVLMDIRHP 119 Query: 134 VKQIDQDVFSF 144 K +DQD+ + Sbjct: 120 FKDLDQDLIHW 130 >gi|118363026|ref|XP_001014615.1| GTP-binding protein, putative [Tetrahymena thermophila] gi|89296505|gb|EAR94493.1| GTP-binding protein, putative [Tetrahymena thermophila SB210] Length = 6516 Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 55/144 (38%), Positives = 85/144 (59%), Gaps = 8/144 (5%) Query: 37 RSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGY 96 RSNVGKSS+IN ++N K + TSN PG+T+ LNF N L+D PGYGY Sbjct: 63 RSNVGKSSMINSILNFK-MMDTSNMPGKTRELNFIT-------MNPQSGAVLIDPPGYGY 114 Query: 97 ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVL 156 A+ +K + +WG ++ Y S L +++LID HG+K++D + L++K Y IV Sbjct: 115 AKGQRKEIQAWGKMMQNYFVHSSHLHRLFILIDSEHGIKEVDLMLMELLEQKMKPYVIVY 174 Query: 157 TKIDKLSPTTAQETLEKTKYLIRN 180 TK DK++ Q+ +E+ K +++ Sbjct: 175 TKCDKINQQKQQKLVEEAKNKLKD 198 >gi|302341537|ref|YP_003806066.1| ribosome biogenesis GTP-binding protein YsxC [Desulfarculus baarsii DSM 2075] gi|301638150|gb|ADK83472.1| ribosome biogenesis GTP-binding protein YsxC [Desulfarculus baarsii DSM 2075] Length = 197 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 11/179 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 AF+GRSNVGKSSLIN L+ RKNL + S PGRTQ +NFF L N+ A+ VD+ Sbjct: 28 FAFAGRSNVGKSSLINCLLRRKNLVKVSQRPGRTQQINFFA------LNND--ALRFVDL 79 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYG+A+ P W +I YL R TL+ V +++D R D + +L + Sbjct: 80 PGYGFAKVPLAIKAGWKKMIESYLESRPTLKAVVVIVDIRREPSPDDLMLLGWLLSLGLP 139 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + +TK DKLS A + L K + + Y A + S+V +G + L + +L + Sbjct: 140 AVVAVTKADKLSRNQAAQRLAKLRPQLAPYDAAP---VVCSAVTGQGRQELWERLLARL 195 >gi|254458024|ref|ZP_05071451.1| hypothetical protein CBGD1_2269 [Campylobacterales bacterium GD 1] gi|207085417|gb|EDZ62702.1| hypothetical protein CBGD1_2269 [Campylobacterales bacterium GD 1] Length = 210 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 20/198 (10%) Query: 14 FLRGVPEIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ I P+ E+ F RSNVGKSSL+N L N K LA+ S+ PG+T+ +N+F Sbjct: 9 FVTSAANISGAPETDEQNEVVFMARSNVGKSSLLNALTNHKGLAKVSSTPGKTRLINYF- 67 Query: 73 PKDFSNLKNNLPAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 F + +N+ ++A VD+PG+GYA+ K W + Y+S+R ++ LIDCR Sbjct: 68 DVTFIDRENSQKSIAKFVDLPGFGYAKVSKSMKYDWERNLTDYISQREQIKLFIHLIDCR 127 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 H +ID V FL Q +L TK+DKL+ +K + +R T P Sbjct: 128 HPDLEIDTSVSEFLFDNCRENQYILQIFTKVDKLN--------QKEQNALR---TKFPNA 176 Query: 189 IPTSSVKRKGIEVLRKAI 206 + SS K++G ++KAI Sbjct: 177 MMVSSSKKRG---MQKAI 191 >gi|258567942|ref|XP_002584715.1| predicted protein [Uncinocarpus reesii 1704] gi|237906161|gb|EEP80562.1| predicted protein [Uncinocarpus reesii 1704] Length = 326 Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 9/153 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + ++L G +P+A PE+ F GRSNVGKSS+IN LV +++ +S GRT+ Sbjct: 89 SKHSPVYLWGTDIFRTIPEAAIPEVVFIGRSNVGKSSIINALVG-EDICASSKKLGRTKL 147 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 ++ KN +ALVD PGYG K + WG I +YL +R LR ++LL Sbjct: 148 ISAI---GLGGTKNEDSRIALVDTPGYG-----KGSQAEWGQEIQKYLEKRKQLRRIFLL 199 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 +D + G+K D DV +FL + AV YQ+VLTK D Sbjct: 200 LDGKVGLKPRDHDVLAFLRQFAVPYQLVLTKSD 232 >gi|328952831|ref|YP_004370165.1| GTP-binding protein engB [Desulfobacca acetoxidans DSM 11109] gi|328453155|gb|AEB08984.1| GTP-binding protein engB [Desulfobacca acetoxidans DSM 11109] Length = 199 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 66/152 (43%), Positives = 87/152 (57%), Gaps = 15/152 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ +I LP PE+AF GRSNVGKSSLIN L++R+NL RTS+ PG TQ +N+F Sbjct: 11 FVVSAHQIEQLPGGVLPEVAFWGRSNVGKSSLINALLHRQNLVRTSSRPGCTQAINYF-- 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L N + VD+PGYGYA+AP + W LI YL + LR V L+D R Sbjct: 69 -----LVNRV--WHFVDLPGYGYAQAPLPVKEKWLRLISTYLETQKRLRAVVWLLDAR-- 119 Query: 134 VKQIDQDVFSFLDKKAVSYQ---IVLTKIDKL 162 +Q + +LD+ Q +VLTK DK+ Sbjct: 120 -RQPGPEELDWLDRLRSWRQEVVVVLTKADKI 150 >gi|83595990|gb|ABC25349.1| GTP-binding protein [uncultured marine bacterium Ant29B7] Length = 215 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 79/138 (57%), Gaps = 8/138 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE AF GRSNVGKSSLIN LV K LA+ S PG+TQ +N F +D ALV Sbjct: 32 PEYAFIGRSNVGKSSLINRLVGNKYLAKISGRPGKTQLINHFSIED--------GQWALV 83 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K + +I YL R L V++L+D RH +++D L Sbjct: 84 DLPGYGYAKVSKIQRTEFSRMIAYYLRNRKNLVNVFVLVDGRHEPQKLDLAFVKKLGNWG 143 Query: 150 VSYQIVLTKIDKLSPTTA 167 + + IV TK+DKLS + + Sbjct: 144 IPFSIVFTKMDKLSNSDS 161 >gi|330874573|gb|EGH08722.1| GTP-binding protein YsxC [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965635|gb|EGH65895.1| GTP-binding protein YsxC [Pseudomonas syringae pv. actinidiae str. M302091] Length = 211 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFGL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 75 DDDRRL---------VDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDLLMLDWAIASHMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|312958180|ref|ZP_07772703.1| GTP-binding protein [Pseudomonas fluorescens WH6] gi|311287611|gb|EFQ66169.1| GTP-binding protein [Pseudomonas fluorescens WH6] Length = 255 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 58 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFKL 116 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 117 DDDRRL---------VDLPGYGYAKVPIPLKLHWQRHLEAYLGGRESLKGLILMMDIRHP 167 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 168 MTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDAITIQLFSA 227 Query: 194 VKRKGIE 200 KR G+E Sbjct: 228 PKRMGLE 234 >gi|322435231|ref|YP_004217443.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium sp. MP5ACTX9] gi|321162958|gb|ADW68663.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium sp. MP5ACTX9] Length = 203 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 90/176 (51%), Gaps = 11/176 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL-PAMAL 88 PEIAF GRSNVGKSSLIN L+ K A TS+ PGRT+ +NFF + S K + P+M Sbjct: 27 PEIAFLGRSNVGKSSLINALLGSKQ-AHTSSTPGRTRAINFFALHEGSGDKKKIRPSMIF 85 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D+PGYGYA+ + W I YL+ER TL L+D + D + F Sbjct: 86 ADLPGYGYAKISRSISAEWPSFIEPYLAERETLALAVCLVDTNIPPQPNDSQLIEFFKAM 145 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVL 202 Y +V TK D++S ++L K AH E++P S+ G + L Sbjct: 146 LKPYLVVGTKSDRISGNVLAKSLAALK-------KAHGVSEILPVSTKTEAGTKEL 194 >gi|301763876|ref|XP_002917368.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein 8-like [Ailuropoda melanoleuca] Length = 288 Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 98/183 (53%), Gaps = 19/183 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKN 81 P PE+ F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 106 PDLSHPEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKYFT---- 161 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 +VDMPGYGY RAP+ VD ++ YL ER L +LL+D G+++ D Sbjct: 162 ------VVDMPGYGY-RAPEDFVD----MVETYLKERRNLMRTFLLVDSVVGIQKTDSIA 210 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ A+ Y +VLTKIDK S ++ L+ K++ P++ P SSV GI Sbjct: 211 IGMCEEFALPYVMVLTKIDKSSKGHLLKQVLQIQKFVDSETQGCFPQLFPVSSVTYSGIH 270 Query: 201 VLR 203 +LR Sbjct: 271 LLR 273 >gi|229587658|ref|YP_002869777.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas fluorescens SBW25] gi|259645904|sp|C3K6T0|ENGB_PSEFS RecName: Full=Probable GTP-binding protein EngB gi|229359524|emb|CAY46365.1| probable GTP-binding protein [Pseudomonas fluorescens SBW25] Length = 213 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFKL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 75 DDDRRL---------VDLPGYGYAKVPIPLKLHWQRHLEAYLGGRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDAITIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|87120351|ref|ZP_01076246.1| putative GTPase, involved in coordination of cell cycle (EngB) [Marinomonas sp. MED121] gi|86164454|gb|EAQ65724.1| putative GTPase, involved in coordination of cell cycle (EngB) [Marinomonas sp. MED121] Length = 211 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 17/194 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ ++ P E+AF+GRSN GKS+ +N L ++K LARTS PGRTQ +N F Sbjct: 13 FIKSAEKLSQCPVDQGLEVAFAGRSNAGKSTALNTLTDQKKLARTSKTPGRTQLINCF-- 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N+ L+D+PGYG+A+ P W + YL R +L V L++D RH Sbjct: 71 ------GLNVEDRRLIDLPGYGFAKVPVAMKMKWQAHMQDYLMNRRSLAGVVLVMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT-- 191 +K+ D + + + ++LTK DKL A+ T + +++ EVI + Sbjct: 125 LKEFDHMMLDWAKSNKMQVHVILTKSDKLKRGPAKSTKLQVAKALKDL-----EVIGSVQ 179 Query: 192 --SSVKRKGIEVLR 203 S + GI+ LR Sbjct: 180 TFSGLNGDGIDELR 193 >gi|46580074|ref|YP_010882.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio vulgaris str. Hildenborough] gi|81566751|sp|Q72BH2|ENGB_DESVH RecName: Full=Probable GTP-binding protein EngB gi|46449490|gb|AAS96141.1| GTP-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233927|gb|ADP86781.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio vulgaris RCH1] Length = 216 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 82/134 (61%), Gaps = 12/134 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMA 87 P+IA +GRSNVGKSSL+N L RK LA+TS+ PG+T+ +N++ P+ F Sbjct: 23 PQIALAGRSNVGKSSLVNALARRKQLAKTSSTPGKTRSVNYYRVEPEGFY---------- 72 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD+PGYGYA+ K+ W LI +Y+ +LR + +L+DCR +++D D+ S+ Sbjct: 73 IVDLPGYGYAQCSKEERKKWAKLIEKYIVSCKSLRGLAVLLDCRLDPQRLDVDLTSYARA 132 Query: 148 KAVSYQIVLTKIDK 161 + VLTK DK Sbjct: 133 NNIPLLPVLTKGDK 146 >gi|224539566|ref|ZP_03680105.1| hypothetical protein BACCELL_04473 [Bacteroides cellulosilyticus DSM 14838] gi|224518800|gb|EEF87905.1| hypothetical protein BACCELL_04473 [Bacteroides cellulosilyticus DSM 14838] Length = 201 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 98/186 (52%), Gaps = 18/186 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ + +V Sbjct: 24 PEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLINK---------SWYIV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYAR +K +I Y+ ER + ++LLID R + ID + +L + Sbjct: 75 DLPGYGYARRGQKGKSQIQRIIEDYILEREQMTNLFLLIDSRLEPQVIDIEFMGWLGEHG 134 Query: 150 VSYQIVLTKIDKLSP----TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + IV TK DKL T Q+ L+K K P P + TSS R G + L Sbjct: 135 IPFSIVFTKGDKLKGGRLNTNIQQYLKKLKEQWEELP---PYFV-TSSENRMGKKELLDY 190 Query: 206 ILETIN 211 I E+IN Sbjct: 191 I-ESIN 195 >gi|294101892|ref|YP_003553750.1| ribosome biogenesis GTP-binding protein YsxC [Aminobacterium colombiense DSM 12261] gi|293616872|gb|ADE57026.1| ribosome biogenesis GTP-binding protein YsxC [Aminobacterium colombiense DSM 12261] Length = 197 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 14/143 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFSNLK 80 P PE+AF GRSNVGKS L+N L+ RK LA + PG+T+ +NF+ DF Sbjct: 19 FPPQTLPEVAFVGRSNVGKSMLLNALMERK-LAHVGSTPGKTRSVNFYKIEAEVDF---- 73 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVD+PGYGYA K + W LI +Y+++R TL+ + L+D RHG+ + DQ+ Sbjct: 74 ------FLVDLPGYGYAARGFKEKEKWAKLIEQYITQRETLQLLVHLVDFRHGLLKNDQE 127 Query: 141 VFSFLDKKAVSYQIVLTKIDKLS 163 + ++ + + +V TK DK+S Sbjct: 128 LQEWISQIGIPSLVVFTKADKIS 150 >gi|320528421|ref|ZP_08029583.1| ribosome biogenesis GTP-binding protein YsxC [Solobacterium moorei F0204] gi|320131335|gb|EFW23903.1| ribosome biogenesis GTP-binding protein YsxC [Solobacterium moorei F0204] Length = 194 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 102/186 (54%), Gaps = 12/186 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + PEI F GRSN GKS+LIN LVNRKNLA + PG+T+ LNFF + Sbjct: 19 PVSDLPEIIFVGRSNAGKSTLINGLVNRKNLAYSGKTPGKTRLLNFFSVDN--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + D PGYGYA + +++ ++ LI Y ++R L+ + +++D R D + + Sbjct: 70 KVVFTDAPGYGYATSDRQSALAFAKLIDPYFAKRDQLKAMIIVLDARRVPSNDDIQMVEY 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + ++ V TKIDKLS + + L+K + A +IP ++ K++G+EV+ + Sbjct: 130 GKESHLAIFAVCTKIDKLSRSQMLQNLKKISMTLGIQENA---LIPVNAEKKQGLEVVWE 186 Query: 205 AILETI 210 I + I Sbjct: 187 KIDQLI 192 >gi|197294280|ref|YP_001798821.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Phytoplasma australiense] gi|171853607|emb|CAM11478.1| GTP-binding protein [Candidatus Phytoplasma australiense] Length = 192 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/197 (33%), Positives = 97/197 (49%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R + I P PEI GRSNVGKSS IN L RK LA+TS PG+T LN++ Sbjct: 7 FIRSIENIKDQPLENYPEIILMGRSNVGKSSFINALTQRKKLAKTSQTPGKTITLNYYYV 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + L+D PGYGY++ K + +I+ +L + + L+ ++ LID + G Sbjct: 67 ND---------SFYLIDTPGYGYSKRSKSIQKQFLPMIISFLEQSNRLKAIFQLIDFKIG 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 Q D + L K IV K D++ TT L+K + N+ T SS Sbjct: 118 PTQEDDRIHQALLKAQFEVIIVFVKKDQVKKTTQPNQLKK----LINHFTNIKRFFLVSS 173 Query: 194 VKRKGIEVLRKAILETI 210 K++G + L +L + Sbjct: 174 AKKEGFKDLTDFLLSLV 190 >gi|120602468|ref|YP_966868.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio vulgaris DP4] gi|166225952|sp|A1VDC5|ENGB_DESVV RecName: Full=Probable GTP-binding protein EngB gi|120562697|gb|ABM28441.1| GTP-binding protein, HSR1-related protein [Desulfovibrio vulgaris DP4] Length = 216 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 55/134 (41%), Positives = 82/134 (61%), Gaps = 12/134 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMA 87 P+IA +GRSNVGKSSL+N L RK LA+TS+ PG+T+ +N++ P+ F Sbjct: 23 PQIALAGRSNVGKSSLVNALARRKQLAKTSSTPGKTRSVNYYRVEPEGFY---------- 72 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD+PGYGYA+ K+ W LI +Y+ +LR + +L+DCR +++D D+ S+ Sbjct: 73 IVDLPGYGYAQCSKEERKKWAKLIEKYIVSCKSLRGLAVLLDCRLDPQRLDVDLTSYARA 132 Query: 148 KAVSYQIVLTKIDK 161 + VLTK DK Sbjct: 133 NNIPLLPVLTKGDK 146 >gi|153806695|ref|ZP_01959363.1| hypothetical protein BACCAC_00966 [Bacteroides caccae ATCC 43185] gi|149131372|gb|EDM22578.1| hypothetical protein BACCAC_00966 [Bacteroides caccae ATCC 43185] Length = 201 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 79/134 (58%), Gaps = 11/134 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMAL 88 PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F + K++ L Sbjct: 24 PEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTMLINHFLINKNW----------YL 73 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYAR +K D +I Y+ ER + +++LID R + ID + +L + Sbjct: 74 VDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQNIDLEFMEWLGEN 133 Query: 149 AVSYQIVLTKIDKL 162 + + I+ TK DKL Sbjct: 134 GIPFSIIFTKADKL 147 >gi|332225395|ref|XP_003261865.1| PREDICTED: GTP-binding protein 8-like isoform 1 [Nomascus leucogenys] Length = 284 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 99/183 (54%), Gaps = 19/183 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKN 81 P PE+ F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 106 PDLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFT---- 161 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 +VDMPGYGY RAP+ VD ++ YL ER L+ +LL+D G+++ D Sbjct: 162 ------VVDMPGYGY-RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVGIQKTDNIA 210 Query: 142 FSFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ A+ Y IVLTKIDK S ++ L+ K++ P++ P S+V GI Sbjct: 211 IEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNTKTQGCFPQLFPVSAVAFSGIH 270 Query: 201 VLR 203 +LR Sbjct: 271 LLR 273 >gi|198275301|ref|ZP_03207832.1| hypothetical protein BACPLE_01460 [Bacteroides plebeius DSM 17135] gi|198271884|gb|EDY96154.1| hypothetical protein BACPLE_01460 [Bacteroides plebeius DSM 17135] Length = 203 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 12/182 (6%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKN 81 + P+ PE AF GRSNVGKSSLIN+L LA TS PG+T +N F + K++ Sbjct: 17 MCPQTHLPEYAFIGRSNVGKSSLINMLTKNPKLAMTSATPGKTLLINHFLINKEW----- 71 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ KK ++ LI Y+ ER + C+++LID R ++ID + Sbjct: 72 -----YLVDLPGYGYAQRGKKMMEKIQKLIEYYVLEREQMTCLFVLIDSRLEPQRIDLEF 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIE 200 +L + + + ++ TK DK S + ++ + L + P I +S K E Sbjct: 127 IEWLGENGIPFALIFTKADKQSVGKTKASVNRFLDTLKEQWEELPPHFISSSENKTGRQE 186 Query: 201 VL 202 +L Sbjct: 187 IL 188 >gi|21313623|ref|NP_079608.1| GTP-binding protein 8 isoform 1 [Mus musculus] gi|81904385|sp|Q9CY28|GTPB8_MOUSE RecName: Full=GTP-binding protein 8 gi|12846786|dbj|BAB27301.1| unnamed protein product [Mus musculus] gi|74190763|dbj|BAE28175.1| unnamed protein product [Mus musculus] gi|76827355|gb|AAI07217.1| GTP-binding protein 8 (putative) [Mus musculus] gi|148665632|gb|EDK98048.1| GTP-binding protein 8 (putative), isoform CRA_a [Mus musculus] Length = 285 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 25/186 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLA-----RTSNAPGRTQHLNFF-VPKDFSN 78 P PE+ F GRSNVGKSSLI L + LA R S PG T+ +NFF V K F+ Sbjct: 107 PSLQQPEVCFIGRSNVGKSSLIKALFS---LAPDVEVRISKKPGHTKKMNFFKVGKHFT- 162 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 LVDMPGYGY RAP+ VD ++ YL ER+ L+ +LL+D G+ ++D Sbjct: 163 ---------LVDMPGYGY-RAPEDFVD----MVETYLKERNNLKRTFLLVDSVVGITKLD 208 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 ++ A+ Y ++LTKIDK S ++ L+ K++ P++ P S+V Sbjct: 209 NIAIEMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQKFVNTQTQGCFPQLFPISAVTNS 268 Query: 198 GIEVLR 203 G+ +L+ Sbjct: 269 GVHLLK 274 >gi|319902362|ref|YP_004162090.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides helcogenes P 36-108] gi|319417393|gb|ADV44504.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides helcogenes P 36-108] Length = 201 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 69/188 (36%), Positives = 95/188 (50%), Gaps = 12/188 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P PE AF GRSNVGKSSLIN+L N K LA TS PG+T +N F + K++ Sbjct: 19 PPGTFPEYAFIGRSNVGKSSLINMLTNHKGLAMTSATPGKTMLINHFLINKNW------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ +K + +I Y+ +R + +++L+D R + ID D Sbjct: 72 ---YLVDLPGYGYAKRGQKGQEQIQNIIRSYILQREQMTNLFVLVDSRLEPQAIDLDFIE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + V + IV TK DK+ + + + P TSS R G E L Sbjct: 129 WLGENGVPFAIVFTKGDKMKGGRLNANIRQYLKKLEEQWEELPPYFITSSENRMGREELL 188 Query: 204 KAILETIN 211 I E IN Sbjct: 189 DYI-EKIN 195 >gi|298484198|ref|ZP_07002363.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D22] gi|298269611|gb|EFI11207.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D22] Length = 201 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/134 (42%), Positives = 82/134 (61%), Gaps = 11/134 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMAL 88 PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N F + K++ L Sbjct: 24 PEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINHFLINKNW----------YL 73 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYAR +K + +I Y+ ER + +++LID R ++ID + +L + Sbjct: 74 VDLPGYGYARRGQKGKNQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGEN 133 Query: 149 AVSYQIVLTKIDKL 162 + + I+ TK DKL Sbjct: 134 GIPFSIIFTKADKL 147 >gi|295112118|emb|CBL28868.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Synergistetes bacterium SGP1] Length = 195 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 66/183 (36%), Positives = 99/183 (54%), Gaps = 10/183 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP PE+ +GRSNVGKSSLIN + + LA PG+T+ +NF+ ++ + Sbjct: 15 LPPEECPEVVIAGRSNVGKSSLINAFLGIR-LAHVGATPGKTRSINFY------RVEEDE 67 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA K D+W LI Y+ R+ LR V L+D RHG+ D ++ Sbjct: 68 RPFRLVDLPGYGYASRSKAEKDAWLRLISAYVEGRAALRLVCHLVDFRHGLLANDLELQE 127 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + +V TK DKL+ ++ + +Y+ R + ++ TS+ KR G+E LR Sbjct: 128 WLVRCGRDILVVFTKADKLARGRWKDRVR--QYVARGLHSVDLPIV-TSAEKRVGVEELR 184 Query: 204 KAI 206 I Sbjct: 185 SFI 187 >gi|74002698|ref|XP_849440.1| PREDICTED: hypothetical protein XP_844347 [Canis familiaris] Length = 288 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 98/181 (54%), Gaps = 25/181 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLA-----RTSNAPGRTQHLNFF-VPKDFSNLKNNL 83 PE+ F GRSNVGKSSLI L + LA R S PG T+ +NFF V K F+ Sbjct: 111 PEVCFIGRSNVGKSSLIKALFS---LAPDVEVRVSKKPGHTKKMNFFKVGKYFT------ 161 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVDMPGYGY RAP+ VD ++ YL ER L +LL+D G+++ D Sbjct: 162 ----LVDMPGYGY-RAPEDFVD----MVETYLKERRNLMRTFLLVDSVVGIQKTDNIAIG 212 Query: 144 FLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++ A+ Y +VLTKIDK S ++ L+ K++ P++ P SSV GI +L Sbjct: 213 MCEEFALPYVMVLTKIDKSSKGHLLKQVLQIQKFVESETQGCFPQLFPVSSVTYSGIHLL 272 Query: 203 R 203 R Sbjct: 273 R 273 >gi|237720986|ref|ZP_04551467.1| GTPase EngB [Bacteroides sp. 2_2_4] gi|229449821|gb|EEO55612.1| GTPase EngB [Bacteroides sp. 2_2_4] Length = 201 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 101/184 (54%), Gaps = 14/184 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMAL 88 PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N F + K++ L Sbjct: 24 PEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINHFLINKNW----------YL 73 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYAR +K + +I Y+ ER + +++LID R ++ID + +L + Sbjct: 74 VDLPGYGYARRGQKGKNQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGEN 133 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + I+ TK DKL + + + L + + P + +S + +++L + Sbjct: 134 GIPFSIIFTKADKLKGGRLKMNINAYLRELGKQWEELPPHFVSSSEDRTGRVDILN--YI 191 Query: 208 ETIN 211 E IN Sbjct: 192 ENIN 195 >gi|154277838|ref|XP_001539752.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150413337|gb|EDN08720.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 361 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 85/143 (59%), Gaps = 9/143 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E +P + PE+ F GRSNVGKSSL+N ++ K L TS+ GRT+ LN + Sbjct: 83 EFRTIPMSDVPEVVFLGRSNVGKSSLLNAIME-KGLCFTSSKVGRTRTLNAY---GIGGR 138 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K+ + LVD PGYG K + + WG +I++YL++R LR ++L+D HG+K D Sbjct: 139 KDGEARVVLVDTPGYG-----KGSHEEWGEVIMKYLTKRRQLRRTFVLLDSHHGIKPADA 193 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 + S L AV +Q++L+K+D + Sbjct: 194 AILSLLRSAAVPHQVILSKVDSV 216 >gi|258646883|ref|ZP_05734352.1| ribosome biogenesis GTP-binding protein YsxC [Dialister invisus DSM 15470] gi|260404322|gb|EEW97869.1| ribosome biogenesis GTP-binding protein YsxC [Dialister invisus DSM 15470] Length = 211 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/182 (37%), Positives = 94/182 (51%), Gaps = 6/182 (3%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA--L 88 EIAF GRSNVGKSSLIN L + LA S PG+T+ +N++ + + + L Sbjct: 32 EIAFIGRSNVGKSSLINSLSGMRKLAYVSREPGKTRTINYYAVQSRRDTGSGEERQEWYL 91 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYG+A+ + N DSW G I Y+ L V LL+D RH ID + +L K Sbjct: 92 VDLPGYGFAKTSQANRDSWSGFIDEYIRNSENLVMVGLLVDLRHPGLPIDLKAYEWLKKI 151 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 A QI+ TK DK T E + + L + +P A + SS+ G + L I E Sbjct: 152 APGLQIIGTKADK---TGKNEMNKNLRILEKTFP-ADTAPLAYSSLSGTGRDKLLALIEE 207 Query: 209 TI 210 I Sbjct: 208 KI 209 >gi|154322893|ref|XP_001560761.1| hypothetical protein BC1G_00789 [Botryotinia fuckeliana B05.10] gi|150848123|gb|EDN23316.1| hypothetical protein BC1G_00789 [Botryotinia fuckeliana B05.10] Length = 286 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/131 (38%), Positives = 80/131 (61%), Gaps = 6/131 (4%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F S VGKSSL+N L+N K A TS+ PGRT+ +N F ++N + ++DM Sbjct: 58 MEFGDSSEVGKSSLLNALLNTK-AAYTSSKPGRTRSMNAFAIGGHEGSEDNSERLVVLDM 116 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYG+ P+ WG I++YL +R L+ ++L+D HG+K+ D+ + L + V Sbjct: 117 PGYGHGGRPE-----WGKEIIKYLEKRKQLKRAFVLVDAEHGIKESDRVMLQMLRSQKVP 171 Query: 152 YQIVLTKIDKL 162 +Q+VL+KIDK+ Sbjct: 172 HQVVLSKIDKM 182 >gi|256830250|ref|YP_003158978.1| HSR1-like GTP-binding protein [Desulfomicrobium baculatum DSM 4028] gi|256579426|gb|ACU90562.1| GTP-binding protein HSR1-related [Desulfomicrobium baculatum DSM 4028] Length = 198 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 12/134 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMA 87 P++A +GRSNVGKSSL+N L RKNLA+ S+ PG+T+ LNF+ P++F Sbjct: 23 PQLALAGRSNVGKSSLLNKLTGRKNLAKISSTPGKTRSLNFYRVSPEEF----------Y 72 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD+PGYGYAR K + W LI RYL L V L+D R + +D ++ +++ Sbjct: 73 LVDLPGYGYARCSKTEREKWATLINRYLKNNPRLFGVVALLDSRLPPQALDIELITYIRA 132 Query: 148 KAVSYQIVLTKIDK 161 + + V+TK DK Sbjct: 133 QGMDVFPVMTKADK 146 >gi|319937421|ref|ZP_08011828.1| GTPase engB [Coprobacillus sp. 29_1] gi|319807787|gb|EFW04380.1| GTPase engB [Coprobacillus sp. 29_1] Length = 196 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 15/186 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEI +GRSNVGKSS IN + N LA+ S PG+T+ LNFF D Sbjct: 20 PENDLPEICLAGRSNVGKSSFINTITNHSKLAKVSGTPGKTRTLNFFNIND--------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K +S+G ++ YL ER L+ + L++D RH D+ ++ + Sbjct: 71 ELRLVDVPGYGYAKVNDKIKESFGDMLDTYLRERDVLKGLVLIVDYRHKPTHDDKMMYDY 130 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI--PTSSVKRKGIEVL 202 + +V TK DKL + L+K + +I++ I SS+ + GI+ + Sbjct: 131 AKHYHIPVIVVATKEDKLK----RNDLKKNEKIIKDTLGFDKNDIFLRFSSLNKVGIDEV 186 Query: 203 RKAILE 208 + I+E Sbjct: 187 WERIIE 192 >gi|115377933|ref|ZP_01465117.1| GTP-binding protein [Stigmatella aurantiaca DW4/3-1] gi|115365038|gb|EAU64089.1| GTP-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 177 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 92/175 (52%), Gaps = 7/175 (4%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGY 94 GRSNVGKSS+IN L RK L R SN PGRT+ LNFF V D ++ + L D+PGY Sbjct: 2 GRSNVGKSSMINTLTGRKKLVRVSNTPGRTRTLNFFDVELDRDGHRHQV---RLADLPGY 58 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 G+A+A K + W +I YL +R L V +ID G D +L +K + Sbjct: 59 GFAKASKADRVQWNEMITTYLDKRHRLEAVVSIIDAEIGPTPDDLQTLDYLQEKDRRVLV 118 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V TKID+L+ + ++ L + VI SSV + G++ + A+L T Sbjct: 119 VATKIDRLAKARRKPRIQA---LAQQLDLPLEAVIAFSSVDKIGVDEVWNALLGT 170 >gi|288942607|ref|YP_003444847.1| ribosome biogenesis GTP-binding protein YsxC [Allochromatium vinosum DSM 180] gi|288897979|gb|ADC63815.1| ribosome biogenesis GTP-binding protein YsxC [Allochromatium vinosum DSM 180] Length = 240 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 9/157 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P E+AF+GRSN GKSS IN + ++ LARTS PGRTQ L FF Sbjct: 42 FLTAATKLQQTPADEGREVAFAGRSNAGKSSAINAICHQNALARTSKTPGRTQQLIFFEL 101 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYGYA+ P++ W + YL R +L + +++D RH Sbjct: 102 DETRRL---------VDLPGYGYAKVPERIKLEWQRHLSHYLESRQSLVGLVIVMDIRHP 152 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET 170 + D+ + ++ + +S ++LTK DKL A T Sbjct: 153 LTDYDRQMLTWGRRAGLSILLLLTKADKLKRGAASAT 189 >gi|114588504|ref|XP_001156883.1| PREDICTED: GTP-binding protein 8 isoform 2 [Pan troglodytes] Length = 284 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 98/178 (55%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAM 86 PE+ F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 111 PEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFT--------- 161 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VDMPGYG+ RAP+ VD ++ YL ER L+ +LL+D G+++ D + Sbjct: 162 -VVDMPGYGF-RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVGIQKTDNTAIEMCE 215 Query: 147 KKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + A+ Y IVLTKIDK S ++ L+ K++ P++ P S+V GI +LR Sbjct: 216 EFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLR 273 >gi|121593133|ref|YP_985029.1| ribosome biogenesis GTP-binding protein YsxC [Acidovorax sp. JS42] gi|120605213|gb|ABM40953.1| GTP-binding protein, HSR1-related protein [Acidovorax sp. JS42] Length = 262 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 98/191 (51%), Gaps = 15/191 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LP PEIAF GRSN GKS+ IN L + LA S PGRTQH+N F Sbjct: 53 FLTTAAQLHHLPAIEVPEIAFVGRSNAGKSTCINTLTQQGQLAFASKKPGRTQHINLFAL 112 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K L D+PGYGYA + + W +++ YL R +L + LL D R G Sbjct: 113 G-----KQGATDAVLADLPGYGYAAVSRSDKLRWQQVMLSYLVSRESLTAIVLLCDPRLG 167 Query: 134 VKQIDQDVFSFLDKK---AVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVI 189 + ++D+ + + + + + + ++LTK DKL+ E+ K L I EV Sbjct: 168 LTELDEALLNAVRPRVEAGLKFLVLLTKADKLT------RAEQAKALSITRLQAGGGEVR 221 Query: 190 PTSSVKRKGIE 200 S++K++G++ Sbjct: 222 MFSALKKQGVD 232 >gi|311269998|ref|XP_003132724.1| PREDICTED: GTP-binding protein 8-like isoform 1 [Sus scrofa] Length = 291 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 110/213 (51%), Gaps = 22/213 (10%) Query: 3 SHTIFTKSA---WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + +IFT SA ++ + P PE+ F GRSNVGKSSLI L + + R Sbjct: 81 AESIFTASARNRIDYVSSAVRLDHAPDLRCPEVCFIGRSNVGKSSLIKALFSFAPEVEVR 140 Query: 58 TSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS 116 S PG T+ +NFF V + F+ LVDMPGYGY RAP+ VD ++ YL Sbjct: 141 VSKKPGHTKKMNFFKVGRYFT----------LVDMPGYGY-RAPEDFVD----MVEDYLK 185 Query: 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTK 175 ER L +LL+D G+++ D ++ A+ Y +VLTKIDK S ++ L+ K Sbjct: 186 ERRNLMRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVMVLTKIDKSSKGRLLKQVLQIQK 245 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ P++ P S+V GI +LR I + Sbjct: 246 FVDTETQGCFPQLFPVSAVTFSGIHLLRCFIAD 278 >gi|329955112|ref|ZP_08296093.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides clarus YIT 12056] gi|328526402|gb|EGF53417.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides clarus YIT 12056] Length = 202 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 92/187 (49%), Gaps = 10/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ Sbjct: 19 PGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLINK--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +VD+PGYGYA+ +K + +I Y+ +R + +++L+D RH + ID + Sbjct: 70 SWYIVDLPGYGYAKRGQKGQEQIQRIIETYILQREQMTNLFVLVDSRHEPQAIDLAFIEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + V + IV TK DKL + + P TSS R G + L Sbjct: 130 LGENGVPFAIVFTKADKLKGGRINSNIRHYLEKLHEQWEELPPYFVTSSENRMGRDELLG 189 Query: 205 AILETIN 211 I E IN Sbjct: 190 YI-EQIN 195 >gi|28867574|ref|NP_790193.1| GTP-binding protein EngB [Pseudomonas syringae pv. tomato str. DC3000] gi|213971017|ref|ZP_03399138.1| GTP-binding protein EngB [Pseudomonas syringae pv. tomato T1] gi|301385580|ref|ZP_07233998.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. tomato Max13] gi|302058836|ref|ZP_07250377.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. tomato K40] gi|302132135|ref|ZP_07258125.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|38372197|sp|Q88AP4|ENGB_PSESM RecName: Full=Probable GTP-binding protein EngB gi|28850809|gb|AAO53888.1| GTP-binding protein EngB [Pseudomonas syringae pv. tomato str. DC3000] gi|213924253|gb|EEB57827.1| GTP-binding protein EngB [Pseudomonas syringae pv. tomato T1] gi|331014879|gb|EGH94935.1| GTP-binding protein YsxC [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 211 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFF-- 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 73 ----GLDED---RRLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDLLMLDWAIASHMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|319942202|ref|ZP_08016518.1| hypothetical protein HMPREF9464_01737 [Sutterella wadsworthensis 3_1_45B] gi|319804255|gb|EFW01147.1| hypothetical protein HMPREF9464_01737 [Sutterella wadsworthensis 3_1_45B] Length = 222 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 3/190 (1%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNN 82 LP PEIAF+GRSN GKS+ IN+L + LA S PGRTQ +NFF + + +N Sbjct: 19 LPTELEPEIAFAGRSNAGKSTTINVLTRQTRLAFASKTPGRTQLVNFFELSRKIDGGRNR 78 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + LVD+PGYG+A+A + SW L+ Y++ R LR + +++D R D+ + Sbjct: 79 VVVGRLVDLPGYGFAKANEAVRSSWSDLVGGYIAGRRQLRGLVIVMDSRRPFMPTDEWLI 138 Query: 143 SFLDKK-AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ ++ V +L K D++ + TL + + V S +KR+G++ Sbjct: 139 EFMKQRPEVKMLWLLNKCDQIKTQERRTTLRAVEKRAAEFGD-RVTVQFFSGLKREGVDE 197 Query: 202 LRKAILETIN 211 L K + +N Sbjct: 198 LAKTLETWLN 207 >gi|237797956|ref|ZP_04586417.1| GTP-binding protein YsxC [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020807|gb|EGI00864.1| GTP-binding protein YsxC [Pseudomonas syringae pv. oryzae str. 1_6] Length = 211 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFGL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 75 DEDRRL---------VDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDLLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|329964825|ref|ZP_08301833.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fluxus YIT 12057] gi|328524466|gb|EGF51534.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fluxus YIT 12057] Length = 201 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 94/187 (50%), Gaps = 15/187 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P PE AF GRSNVGKSSLIN+L RK LA TS+ PG+T +N F + K++ Sbjct: 19 PAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSSTPGKTMLINHFLINKNW------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ +K + +I Y+ R + +++LID R + ID D Sbjct: 72 ---YLVDLPGYGYAKRGQKGQEQIQRIIESYILRRKQMTNLFVLIDSRLDPQAIDLDFIE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + + + IV TK DKL + + P TSS R G R Sbjct: 129 WLGENGIPFSIVFTKADKLKGGRLNTHINLYLKKLHEQWEELPPYFVTSSENRMG----R 184 Query: 204 KAILETI 210 K +L+ I Sbjct: 185 KELLDYI 191 >gi|56549685|ref|NP_054889.2| GTP-binding protein 8 isoform 1 [Homo sapiens] gi|74728797|sp|Q8N3Z3|GTPB8_HUMAN RecName: Full=GTP-binding protein 8 gi|22713536|gb|AAH37163.1| GTP-binding protein 8 (putative) [Homo sapiens] gi|119600061|gb|EAW79655.1| GTP-binding protein 8 (putative), isoform CRA_c [Homo sapiens] gi|123982984|gb|ABM83233.1| GTP-binding protein 8 (putative) [synthetic construct] gi|123997661|gb|ABM86432.1| GTP-binding protein 8 (putative) [synthetic construct] gi|158258739|dbj|BAF85340.1| unnamed protein product [Homo sapiens] Length = 284 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 98/178 (55%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAM 86 PE+ F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 111 PEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFT--------- 161 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VDMPGYG+ RAP+ VD ++ YL ER L+ +LL+D G+++ D + Sbjct: 162 -VVDMPGYGF-RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCE 215 Query: 147 KKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + A+ Y IVLTKIDK S ++ L+ K++ P++ P S+V GI +LR Sbjct: 216 EFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLR 273 >gi|257481813|ref|ZP_05635854.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627989|ref|ZP_06460943.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646457|ref|ZP_06477800.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. aesculi str. 2250] gi|330866582|gb|EGH01291.1| GTP-binding protein YsxC [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330890983|gb|EGH23644.1| GTP-binding protein YsxC [Pseudomonas syringae pv. mori str. 301020] gi|330986811|gb|EGH84914.1| GTP-binding protein YsxC [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009448|gb|EGH89504.1| GTP-binding protein YsxC [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 211 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFF-- 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 73 ----GLDED---RRLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDLLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|294053817|ref|YP_003547475.1| ribosome biogenesis GTP-binding protein YsxC [Coraliomargarita akajimensis DSM 45221] gi|293613150|gb|ADE53305.1| ribosome biogenesis GTP-binding protein YsxC [Coraliomargarita akajimensis DSM 45221] Length = 216 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 13/186 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + PE AF GRSNVGKSSLIN+L +K LA TS+ PG+TQ +N F D Sbjct: 19 PPSSLPEFAFVGRSNVGKSSLINMLTGKKGLAMTSSKPGKTQRINIFKIND--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA+ K + + YL+ER L+ ++LL+D + + D + Sbjct: 70 SWHLVDLPGYGYAKLSKSKQHDFNVHVSAYLNERENLKQIFLLVDSQLEPQGGDLAFAEW 129 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L+ + Y ++LTK D+ S + + ++ + + +++ S+ KG R Sbjct: 130 LEHCKLPYSVILTKTDRSSDSKVRNHADQFIAALDEWGLKPNQLLRCSAKTSKG----RT 185 Query: 205 AILETI 210 IL +I Sbjct: 186 PILNSI 191 >gi|189466062|ref|ZP_03014847.1| hypothetical protein BACINT_02427 [Bacteroides intestinalis DSM 17393] gi|189434326|gb|EDV03311.1| hypothetical protein BACINT_02427 [Bacteroides intestinalis DSM 17393] Length = 201 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 94/182 (51%), Gaps = 10/182 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE AF GRSNVGKSSLIN++ RK LA TS PG+T +N F+ + +V Sbjct: 24 PEYAFIGRSNVGKSSLINMMTGRKGLAMTSATPGKTMLINHFLINK---------SWYIV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYAR +K +I Y+ ER + +++LID R + ID + +L + Sbjct: 75 DLPGYGYARRGQKGKSQIQRIIEDYILEREQMTNLFVLIDSRLDPQVIDIEFMGWLGEHG 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + IV TK DKL +++ ++ P TSS R G + L I E+ Sbjct: 135 IPFSIVFTKGDKLKGGRLNSNIQQYLKKLKEQWEELPPYFVTSSENRMGKKELLDYI-ES 193 Query: 210 IN 211 IN Sbjct: 194 IN 195 >gi|148377409|ref|YP_001256285.1| GTPase EngB [Mycoplasma agalactiae PG2] gi|238686660|sp|A5IXT1|ENGB_MYCAP RecName: Full=Probable GTP-binding protein EngB gi|148291455|emb|CAL58840.1| GTP binding protein engB [Mycoplasma agalactiae PG2] Length = 194 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 12/181 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I F GRSNVGKSSL+N LVN+K ++ S PGRTQ +N+F ++ +VD Sbjct: 22 QICFWGRSNVGKSSLLNALVNQK-ISYVSKQPGRTQFINYFQEEN----------RFIVD 70 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ K+ ++ I +L + + ++LLID R G+ +ID + +FL + Sbjct: 71 LPGYGYAQLSKEKIEEMNYWISAFLKDDKCTKVMFLLIDSRTGITKIDLEKLAFLKAINL 130 Query: 151 SYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 ++ TKIDKL+ ++K +YL N SS + G++ L I E Sbjct: 131 PIHLIYTKIDKLNQKEKSALVKKHNEYLDSNLLNESTNSFLVSSTNKIGLDDLVLFIEEN 190 Query: 210 I 210 I Sbjct: 191 I 191 >gi|71736746|ref|YP_272563.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. phaseolicola 1448A] gi|119369231|sp|Q48PV6|ENGB_PSE14 RecName: Full=Probable GTP-binding protein EngB gi|71557299|gb|AAZ36510.1| GTP-binding protein XF1430 [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322197|gb|EFW78293.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. glycinea str. B076] gi|320331848|gb|EFW87786.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. glycinea str. race 4] gi|330872974|gb|EGH07123.1| GTP-binding protein YsxC [Pseudomonas syringae pv. glycinea str. race 4] Length = 211 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFGL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L VD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 75 DEDRRL---------VDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDLLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQTEIRKGWGDAVSIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|226293347|gb|EEH48767.1| GTP-binding protein [Paracoccidioides brasiliensis Pb18] Length = 323 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 85/143 (59%), Gaps = 9/143 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E +P + PE+ F GRSNVGKSSL+N L++ +++ TS+ GRT +N + Sbjct: 83 EFRTIPMSNVPEVVFLGRSNVGKSSLLNALMD-QDVCYTSSKIGRTHTINAY---GVGGR 138 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K + LVD PGYG K + + WG I++YL++R LR ++LID HG+K D+ Sbjct: 139 KAGEAQVVLVDTPGYG-----KGSHEEWGKEIIKYLTKRKQLRRTFVLIDSHHGLKPGDR 193 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 D+ S L A+ +Q++L+K D + Sbjct: 194 DILSLLRSTAIPHQVILSKADSV 216 >gi|289674483|ref|ZP_06495373.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. syringae FF5] gi|302188970|ref|ZP_07265643.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. syringae 642] gi|119369236|sp|Q4ZZT0|ENGB_PSEU2 RecName: Full=Probable GTP-binding protein EngB gi|330938833|gb|EGH42352.1| GTP-binding protein YsxC [Pseudomonas syringae pv. pisi str. 1704B] gi|330952068|gb|EGH52328.1| GTP-binding protein YsxC [Pseudomonas syringae Cit 7] gi|330977285|gb|EGH77240.1| GTP-binding protein YsxC [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 211 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFF-- 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 73 ----GLDED---RRLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDVLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|330957164|gb|EGH57424.1| GTP-binding protein YsxC [Pseudomonas syringae pv. maculicola str. ES4326] Length = 211 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFF-- 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 73 ----GLDED---RRLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDILMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|220904473|ref|YP_002479785.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254783193|sp|B8J030|ENGB_DESDA RecName: Full=Probable GTP-binding protein EngB gi|219868772|gb|ACL49107.1| GTP-binding protein HSR1-related [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 201 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 14/172 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA +GRSNVGKSSL+N L RK LA+ S+ PG+T+ +NF++ + LVD Sbjct: 24 QIALAGRSNVGKSSLVNALAGRKKLAKVSSTPGKTRSVNFYLVEPLR--------FYLVD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYARA + W L+ RYL+E ++L+ + LL+DCR +Q+D ++ SF + Sbjct: 76 LPGYGYARASHSEREKWAKLLERYLTECASLKALALLLDCRLPPQQLDLNLASFAQAHGL 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +LTK DK + ++ + ++ P + TSS R GI+ L Sbjct: 136 PLVPILTKADKCNQRERAAKQKEWQNIVGVSP------VLTSSSSRLGIDRL 181 >gi|154173698|ref|YP_001407908.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter curvus 525.92] gi|112803367|gb|EAU00711.1| GTP-binding protein [Campylobacter curvus 525.92] Length = 205 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/167 (37%), Positives = 94/167 (56%), Gaps = 8/167 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P I + E+ F GRSNVGKSSLIN LVN+K LA++S+ PG+TQ +NFF Sbjct: 9 FISSSPSIKDAAEFALSEVVFLGRSNVGKSSLINALVNQKALAKSSSTPGKTQLINFFEV 68 Query: 74 K-----DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 + D S K + + VD+PG+GYA+ K + W + +L RS+++ LI Sbjct: 69 EFDERDDQSGEKTDKFKIMFVDLPGFGYAKVAKSKHEEWRRNLDEFLKFRSSIKLFVHLI 128 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLE 172 D RH ID +V +++++ Q +L TK DKL+ ++ L+ Sbjct: 129 DARHFDLDIDVNVNNYINEFLRPDQKILNFYTKADKLNQSSKSTVLK 175 >gi|218189008|gb|EEC71435.1| hypothetical protein OsI_03633 [Oryza sativa Indica Group] gi|222619209|gb|EEE55341.1| hypothetical protein OsJ_03357 [Oryza sativa Japonica Group] Length = 344 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 76/221 (34%), Positives = 99/221 (44%), Gaps = 42/221 (19%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 129 PRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKVND--------- 179 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYGYA AP++ +W Y R L V+LL+D K+ID D S+ Sbjct: 180 SWYLVDLPGYGYAAAPQEARTNWDEFTRNYFLGRENLVSVFLLVDASIPAKKIDLDYASW 239 Query: 145 LDKKAVSYQIVLTKID----KLSPTT-----------------------------AQETL 171 L + Q + L P T +E + Sbjct: 240 LGQNKCKIQKSSQTSNYVGINLVPETPLKTSSNVPMTLVFTKCDKRKKKKNGGKRPEENV 299 Query: 172 EKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 E + LIR Y A P I TSSV +G + + + + NY Sbjct: 300 ENFQSLIREYFEAAPPWIMTSSVTNQGRDEILLHMSQLRNY 340 >gi|66043539|ref|YP_233380.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. syringae B728a] gi|63254246|gb|AAY35342.1| GTP-binding protein, HSR1-related [Pseudomonas syringae pv. syringae B728a] Length = 235 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 40 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFF-- 96 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 97 ----GLDED---RRLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRHP 149 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 150 MTDFDVLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFSA 209 Query: 194 VKRKGIE 200 KR G+E Sbjct: 210 PKRMGLE 216 >gi|255087758|ref|XP_002505802.1| predicted protein [Micromonas sp. RCC299] gi|226521072|gb|ACO67060.1| predicted protein [Micromonas sp. RCC299] Length = 531 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/195 (32%), Positives = 96/195 (49%), Gaps = 12/195 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PE+A GRSNVGKSSL+N+L NRK++A+TS PG+T+ +N F Sbjct: 306 FMQACVRVKDCPPPKHPEVAVIGRSNVGKSSLVNMLTNRKDIAKTSKNPGKTRTINHF-- 363 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+A AP++ W YL R L V LLID Sbjct: 364 ----EMITGDGTWYFVDLPGYGFANAPEEARRKWAEFTREYLLGRPNLLSVMLLIDSTVK 419 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA------QETLEKTKYLIRNYPTAHPE 187 +++D + FL + + +V TK+DK + +E +E + Y P Sbjct: 420 PQRLDLECLEFLGENNIPVTVVFTKVDKKRKVKSGKRANPEENVEAFCREVSEYWDELPP 479 Query: 188 VIPTSSVKRKGIEVL 202 +I TSS G + + Sbjct: 480 MIFTSSKTGDGKQAV 494 >gi|118475226|ref|YP_892343.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter fetus subsp. fetus 82-40] gi|118414452|gb|ABK82872.1| GTP-binding protein [Campylobacter fetus subsp. fetus 82-40] Length = 198 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 16/189 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G E+AF GRSNVGKSS+IN L N + LA++S+ PG+TQ +NFF F N +P Sbjct: 20 PDFGISEVAFLGRSNVGKSSIINALTNHQGLAKSSSTPGKTQLINFF-EVIFDNDGQKIP 78 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD+PG+GYA+ K +W + +L R ++ L+D RH + D+++ + Sbjct: 79 -IIFVDLPGFGYAKVSKSLYSAWQKNLDEFLKNRINIKTFVHLVDSRHANLEKDENLGVY 137 Query: 145 LDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L++ + Q +L TK DKL+ + E++K L I SS K+ GI+ Sbjct: 138 LNEFIRNDQKILNLYTKCDKLNQS------ERSKVL-----KMDSSAILVSSTKKTGIDK 186 Query: 202 LRKAILETI 210 + I ++ Sbjct: 187 ASETIYNSV 195 >gi|68163469|ref|NP_001020186.1| GTP-binding protein 8 [Rattus norvegicus] gi|81882579|sp|Q5BK22|GTPB8_RAT RecName: Full=GTP-binding protein 8 gi|60688430|gb|AAH91236.1| GTP-binding protein 8 (putative) [Rattus norvegicus] gi|149060437|gb|EDM11151.1| GTP-binding protein 8 (putative), isoform CRA_a [Rattus norvegicus] Length = 285 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 99/183 (54%), Gaps = 19/183 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKN--LARTSNAPGRTQHLNFF-VPKDFSNLKN 81 P PE+ F GRSNVGKSSLI L + R S PG T+ +NFF V K F+ Sbjct: 107 PSLRQPEVCFIGRSNVGKSSLIKALFSMAPDVEVRISKKPGHTKKMNFFKVGKHFT---- 162 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVDMPGYGY RAP+ VD ++ YL ER+ L+ +LL+D G+ ++D Sbjct: 163 ------LVDMPGYGY-RAPEDFVD----MVETYLKERNNLKRTFLLVDSVVGITKLDNIA 211 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ A+ Y ++LTKIDK S ++ L+ +++ P++ P S+V G+ Sbjct: 212 IEMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQEFVNTQTQGCFPQLFPISAVTYSGVH 271 Query: 201 VLR 203 +L+ Sbjct: 272 LLK 274 >gi|10176792|dbj|BAA96928.2| unnamed protein product [Arabidopsis thaliana] Length = 397 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 78/124 (62%), Gaps = 9/124 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEIAF+GRSNVGKSSL+N L + + RTS+ PG TQ +NFF Sbjct: 283 FPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFF---------GLG 333 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + LVD+PGYG+A A + ++W L+ Y+S R++L+ V LL+D + G+K DQ++ + Sbjct: 334 PKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTKWGMKPRDQELIN 393 Query: 144 FLDK 147 +++ Sbjct: 394 LMER 397 >gi|213421719|ref|ZP_03354785.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 119 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 9/114 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D LVD Sbjct: 5 EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVD---------GKRLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +PGYGYA P++ W + YL +R +L+ + +L+D RH +K +DQ + + Sbjct: 56 LPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQW 109 >gi|330972147|gb|EGH72213.1| GTP-binding protein YsxC [Pseudomonas syringae pv. aceris str. M302273PT] Length = 211 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 96/187 (51%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFF-- 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 73 ----GLDED---RRLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDVLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRLGLE 192 >gi|226693391|ref|NP_001152801.1| GTP-binding protein 8 isoform 2 [Mus musculus] gi|76825456|gb|AAI07218.1| Gtpbp8 protein [Mus musculus] Length = 218 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/191 (36%), Positives = 104/191 (54%), Gaps = 25/191 (13%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLA-----RTSNAPGRTQHLNFF-VP 73 E+ LP+ ++ F GRSNVGKSSLI L + LA R S PG T+ +NFF V Sbjct: 35 EVLRLPQKQLTKVCFIGRSNVGKSSLIKALFS---LAPDVEVRISKKPGHTKKMNFFKVG 91 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K F+ LVDMPGYGY RAP+ VD ++ YL ER+ L+ +LL+D G Sbjct: 92 KHFT----------LVDMPGYGY-RAPEDFVD----MVETYLKERNNLKRTFLLVDSVVG 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTS 192 + ++D ++ A+ Y ++LTKIDK S ++ L+ K++ P++ P S Sbjct: 137 ITKLDNIAIEMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQKFVNTQTQGCFPQLFPIS 196 Query: 193 SVKRKGIEVLR 203 +V G+ +L+ Sbjct: 197 AVTNSGVHLLK 207 >gi|12045192|ref|NP_073003.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma genitalium G37] gi|1351548|sp|P47577|ENGB_MYCGE RecName: Full=Probable GTP-binding protein EngB gi|3844914|gb|AAC71558.1| GTP-binding protein engB, putative [Mycoplasma genitalium G37] gi|166079027|gb|ABY79645.1| GTP-binding protein engB, putative [synthetic Mycoplasma genitalium JCVI-1.0] Length = 191 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 17/196 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ ++ P+ PEI F GRSNVGKSSLIN +K LA+TS PGRTQ LN+F Sbjct: 5 FLKSASDLKDCPQDNIPEICFMGRSNVGKSSLINAFF-KKKLAKTSATPGRTQLLNYFEY 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 KD VD+PGYG+A+ K D L+ ++L+ RS L V L++D G Sbjct: 64 KD----------KRFVDLPGYGFAKINKNKKDFITNLLTQFLNFRSNLVGVVLIVDS--G 111 Query: 134 VKQI-DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 V + DQ+V + + +++ IV K DKL+ + +L+ ++ + + S Sbjct: 112 VVTVQDQEVVKIILQTGLNFLIVANKFDKLNQSERYFSLKNIANFLK---VNFDKCVFAS 168 Query: 193 SVKRKGIEVLRKAILE 208 + + ++ K I E Sbjct: 169 TKTHHNLALVHKKIFE 184 >gi|116781116|gb|ABK21971.1| unknown [Picea sitchensis] Length = 317 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 96/193 (49%), Gaps = 14/193 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PEIA GRSNVGKSSLIN LV +K++A TS PG+TQ +N F+ Sbjct: 131 PKNALPEIAMMGRSNVGKSSLINSLVRKKDVAMTSKTPGKTQLINHFLINK--------- 181 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +VD+PGYGYA AP W Y R T+ V LLID +++D D ++ Sbjct: 182 SWYIVDLPGYGYANAPDSARTDWSTFTKGYFLNRDTIVTVLLLIDASVPPQKMDLDCANW 241 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + + V TK DK + +E +++ + LI P I TSSV G Sbjct: 242 LGRNNIPLTFVFTKCDKKKSGKSGVKRPEENIKEFQDLISKKYREPPPWIMTSSVTNLGR 301 Query: 200 EVLRKAILETINY 212 + L + + NY Sbjct: 302 DDLLLHLSQLRNY 314 >gi|46445869|ref|YP_007234.1| hypothetical protein pc0235 [Candidatus Protochlamydia amoebophila UWE25] gi|81627683|sp|Q6MEP0|ENGB_PARUW RecName: Full=Probable GTP-binding protein EngB gi|46399510|emb|CAF22959.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 206 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+A GRSNVGKSSL+N L K+L +TS PG+TQ LNFF D +A Sbjct: 31 PEVAVVGRSNVGKSSLLNHLFEAKHLVKTSATPGKTQALNFFSLND---------QIAFA 81 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ P WG ++ YL R +L+ + L+D R + D ++ Sbjct: 82 DLPGYGYAKVPPSVRKEWGPMVRSYLESRESLKLILFLLDIRRIPNEEDIQFLEWVLYHE 141 Query: 150 VSYQIVLTKIDKLS 163 + +VLTKIDK++ Sbjct: 142 KALILVLTKIDKVN 155 >gi|115496704|ref|NP_001069296.1| GTP-binding protein 8 [Bos taurus] gi|122144254|sp|Q0P5E7|GTPB8_BOVIN RecName: Full=GTP-binding protein 8 gi|112362316|gb|AAI20145.1| GTP-binding protein 8 (putative) [Bos taurus] gi|296491454|gb|DAA33507.1| GTP-binding protein 8 [Bos taurus] Length = 288 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 107/208 (51%), Gaps = 22/208 (10%) Query: 3 SHTIFTKSA---WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + + FT SA +L + P PE+ F GRSNVGKSSLI L + + R Sbjct: 81 AESFFTASARNRIEYLTSAVRLDHAPDLHRPEVCFIGRSNVGKSSLIKALFSLAPEVEVR 140 Query: 58 TSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS 116 S PG T+ LNF+ V K F+ LVDMPGYGY RAP+ VD ++ YL Sbjct: 141 VSKKPGHTKKLNFYKVGKYFT----------LVDMPGYGY-RAPEDFVD----MVETYLK 185 Query: 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTK 175 ER L +LL+D G+++ D ++ A+ Y +VLTKIDK S ++ L+ K Sbjct: 186 ERKNLMRTFLLVDSVVGIQKADNIAIEMCEEFALPYVMVLTKIDKPSKGHLLKQVLQIQK 245 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ P++ P S++ GI +LR Sbjct: 246 FVDTKTQGCFPQLFPVSAMTYSGIHLLR 273 >gi|291320077|ref|YP_003515335.1| GTP binding protein EngB [Mycoplasma agalactiae] gi|290752406|emb|CBH40377.1| GTP binding protein engB [Mycoplasma agalactiae] Length = 194 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 97/181 (53%), Gaps = 12/181 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I F GRSNVGKSSL+N LVN+K ++ S PGRTQ +N+F ++ +VD Sbjct: 22 QICFWGRSNVGKSSLLNALVNQK-ISYVSKQPGRTQFINYFQEEN----------RFIVD 70 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ K+ ++ I +L + + V+LLID R G+ +ID + +FL + Sbjct: 71 LPGYGYAQLSKEKIEEMNYWINAFLKDDKCPKVVFLLIDSRTGITKIDLEKLAFLRAINL 130 Query: 151 SYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 ++ TKIDKL+ ++K +YL N SS + G++ L I E Sbjct: 131 PIHLIYTKIDKLNQKEKSALVKKHNEYLDSNLLNESTNSFLVSSTNKIGLDDLVLFIEEN 190 Query: 210 I 210 I Sbjct: 191 I 191 >gi|169334576|ref|ZP_02861769.1| hypothetical protein ANASTE_00979 [Anaerofustis stercorihominis DSM 17244] gi|169259293|gb|EDS73259.1| hypothetical protein ANASTE_00979 [Anaerofustis stercorihominis DSM 17244] Length = 193 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 10/167 (5%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +SA I L + LP EI G+SNVGKSS IN L+NRK+LARTS+ PG+T+ Sbjct: 4 RSAEI-LTSAAKFNQLPPEDKLEIVLIGKSNVGKSSFINNLLNRKSLARTSSVPGKTRTA 62 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N+++ NN +VDMPGYGYA+ K ++ +I YL +R+ V+ L+ Sbjct: 63 NYYII-------NN--EFYIVDMPGYGYAKVSKSEKATFSNIITDYLKKRNADFIVFFLV 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 D RH + D +++ + + +VLTK DK+S ++ ++ K Sbjct: 114 DIRHKPSENDIKMYNEILDNDIYPVVVLTKADKISKNKRKQNIDLIK 160 >gi|255660429|ref|ZP_05405838.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma genitalium G37] Length = 176 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 62/153 (40%), Positives = 87/153 (56%), Gaps = 14/153 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ ++ P+ PEI F GRSNVGKSSLIN +K LA+TS PGRTQ LN+F Sbjct: 5 FLKSASDLKDCPQDNIPEICFMGRSNVGKSSLINAFF-KKKLAKTSATPGRTQLLNYFEY 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 KD VD+PGYG+A+ K D L+ ++L+ RS L V L++D G Sbjct: 64 KD----------KRFVDLPGYGFAKINKNKKDFITNLLTQFLNFRSNLVGVVLIVD--SG 111 Query: 134 VKQI-DQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 V + DQ+V + + +++ IV K DKL+ + Sbjct: 112 VVTVQDQEVVKIILQTGLNFLIVANKFDKLNQS 144 >gi|149194640|ref|ZP_01871736.1| GTPase EngB [Caminibacter mediatlanticus TB-2] gi|149135384|gb|EDM23864.1| GTPase EngB [Caminibacter mediatlanticus TB-2] Length = 197 Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 101/200 (50%), Gaps = 21/200 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P I + E+A GRSNVGKSS +N N+K +A+ S+ PG+T+ +NFF Sbjct: 5 FIKSAPTIKEAIEPNFTEVALLGRSNVGKSSFLNTFTNQK-IAKVSSTPGKTKLINFFEI 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D LVD+PG+GYA+ K + WG + +L R ++ L D RH Sbjct: 64 EDKG------KKYVLVDLPGFGYAKVSKSMLKDWGKNLDEFLKNRYNIKLFIHLRDARHP 117 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 ID +V +L +K V TKIDKL Q L K K +PE + Sbjct: 118 DLDIDNNVDEYLKSFLRKDQQILTVFTKIDKLK----QSELAKLK-------QKYPEALF 166 Query: 191 TSSVKRKGIEVLRKAILETI 210 S++K++GI +++ I E + Sbjct: 167 VSNLKKRGINKVKEKINEIL 186 >gi|121534152|ref|ZP_01665977.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans Nor1] gi|121307255|gb|EAX48172.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans Nor1] Length = 207 Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 60/151 (39%), Positives = 78/151 (51%), Gaps = 11/151 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP----- 84 PEIAF GRSNVGKSSLIN L LAR S +PG+TQ +N++V + LP Sbjct: 29 PEIAFIGRSNVGKSSLINSLCRHHGLARVSASPGKTQTINYYV------VTAKLPNERRL 82 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD+PGYGYARA + W + Y L+ V L+D RH + D ++ + Sbjct: 83 EWYLVDLPGYGYARAGQTQRRQWTRFVEEYFLRSPRLKLVCQLVDLRHPPQASDVAMYGW 142 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 L + Q+V TK DK+ T L K Sbjct: 143 LKTHNLPVQVVATKTDKIGRTHVARHLAAIK 173 >gi|313678275|ref|YP_004056015.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma bovis PG45] gi|312950660|gb|ADR25255.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma bovis PG45] Length = 193 Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 92/173 (53%), Gaps = 12/173 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I F GRSNVGKSSL+N LVN+K ++ S PGRTQ +N+F +D +VD Sbjct: 22 QICFWGRSNVGKSSLLNALVNQK-ISYVSKQPGRTQFINYFQEED----------RFIVD 70 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ K+ + I +LS+ + V+LLID R G+ +ID + SFL + Sbjct: 71 LPGYGYAQLSKEKIVEMNNWINAFLSQDKNPKTVFLLIDSRTGITKIDAEKISFLRSINL 130 Query: 151 SYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++ TKIDKL+ ++K +YL SS + GI L Sbjct: 131 PIHLIYTKIDKLNQREKSALVKKHNEYLSSKLLDDTTHSFLVSSTNKIGINEL 183 >gi|261415550|ref|YP_003249233.1| ribosome biogenesis GTP-binding protein YsxC [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372006|gb|ACX74751.1| ribosome biogenesis GTP-binding protein YsxC [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326689|gb|ADL25890.1| ribosome biogenesis GTP-binding protein YsxC [Fibrobacter succinogenes subsp. succinogenes S85] Length = 217 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 20/205 (9%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+A + L+G+PE L P+IAF GRSNVGKSSL+N L+ +K L + S+ PG+T+ Sbjct: 25 FVKAA-VSLKGLPEEHL------PQIAFLGRSNVGKSSLMNTLMGQKKLVKISSTPGKTR 77 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNFF D LVD+PG G+A+ D I Y+ + L+ + Sbjct: 78 ELNFFKVND---------EFFLVDLPGVGFAKVNNAKRDQMSDFIREYVEKCKDLKGLIY 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RHG ID + + +V +K DK++ Q L K I+ Sbjct: 129 LVDIRHGGTPIDIETVESIRATGCPVLVVASKRDKVN----QSELAKGLRDIQQRLDLDQ 184 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 + + SS+K+ G++ L ILE I+ Sbjct: 185 KPLCVSSLKKTGLDELWTEILEAIH 209 >gi|325096396|gb|EGC49706.1| GTPase EngB [Ajellomyces capsulatus H88] Length = 361 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 9/143 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E +P + PE+ F GRSNVGKSSL+N ++ K L TS+ GRT+ LN + Sbjct: 83 EFRTIPMSDVPEVVFLGRSNVGKSSLLNAIME-KGLCFTSSKVGRTRTLNAY---GIGGR 138 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K+ + LVD PGYG K + + WG +I++YL++R LR ++L+D HG+K D Sbjct: 139 KDGEAKVVLVDTPGYG-----KGSHEEWGEVIMKYLTKRRQLRRTFVLLDSHHGIKPADA 193 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 + S L AV +Q++L+K D + Sbjct: 194 AILSLLRSAAVPHQVILSKADSV 216 >gi|260654938|ref|ZP_05860426.1| ribosome biogenesis GTP-binding protein YsxC [Jonquetella anthropi E3_33 E1] gi|260630253|gb|EEX48447.1| ribosome biogenesis GTP-binding protein YsxC [Jonquetella anthropi E3_33 E1] Length = 204 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 69/187 (36%), Positives = 97/187 (51%), Gaps = 19/187 (10%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P A PEIAF GRSNVGKS+L+N L+ +K LA S+ PG+T+ +NF+ + Sbjct: 17 IPPAEGPEIAFVGRSNVGKSTLLNGLMGQK-LAHVSSKPGKTRSINFYSVEAGRKF---- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PG+GYA + +SW LI +LS R LR + L+D RHG+ D D Sbjct: 72 ---TLVDLPGFGYAALSRSERESWNRLIGDFLSTRGALRLIVHLVDIRHGLLAKDVDFQE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH----PEVIPTSSVKRKGI 199 + +V TK DK+S K L+R Y +A + + S+ + K I Sbjct: 129 WSRNLETPVFVVFTKADKISSG-------KRSGLVRQYVSAGLRSWDKPLVCSNQEPKTI 181 Query: 200 EVLRKAI 206 E LR I Sbjct: 182 EALRNFI 188 >gi|291460374|ref|ZP_06599764.1| ribosome biogenesis GTP-binding protein YsxC [Oribacterium sp. oral taxon 078 str. F0262] gi|291416941|gb|EFE90660.1| ribosome biogenesis GTP-binding protein YsxC [Oribacterium sp. oral taxon 078 str. F0262] Length = 227 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 98/181 (54%), Gaps = 18/181 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 L ++ PE +GRSNVGKSS IN + RK+ AR S+ PG+T+ +NF+ + N Sbjct: 18 LFRSREPEFVMAGRSNVGKSSFINSFIRRKSYARISSTPGKTRTINFY----YVN----- 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + LVD+PGYGYA + W +I +YL ++ V LL+D RH + D +F Sbjct: 69 GSFYLVDLPGYGYAATGAVEQEKWDRMIRKYLRGSESIEEVILLVDIRHDPTKQDIQMFR 128 Query: 144 FLDKKAVSYQ--IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGI 199 ++ A Y+ ++LTK DK+ T LEK + IR A +IP S+ R+G+ Sbjct: 129 WI-VDATGYEPIVILTKSDKIGKT----QLEKRESSIRAVLGASDACRLIPFSARSRQGL 183 Query: 200 E 200 E Sbjct: 184 E 184 >gi|240280534|gb|EER44038.1| GTP-binding protein [Ajellomyces capsulatus H143] Length = 361 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 9/143 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E +P + PE+ F GRSNVGKSSL+N ++ K L TS+ GRT+ LN + Sbjct: 83 EFRTIPMSDVPEVVFLGRSNVGKSSLLNAIME-KGLCFTSSKVGRTRTLNAY---GIGGR 138 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K+ + LVD PGYG K + + WG +I++YL++R LR ++L+D HG+K D Sbjct: 139 KDGEAKVVLVDTPGYG-----KGSHEEWGEVIMKYLTKRRQLRRTFVLLDSHHGIKPADA 193 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 + S L AV +Q++L+K D + Sbjct: 194 AILSLLRSAAVPHQVILSKADSV 216 >gi|330901524|gb|EGH32943.1| GTP-binding protein YsxC [Pseudomonas syringae pv. japonica str. M301072PT] Length = 211 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 10/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTP-ASLARTSKTPGRTQLLNFF-- 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 73 ----GLDED---RRLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + + + I+LTK DKL+ A+ TL K + IR + S+ Sbjct: 126 MTDFDVLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFSA 185 Query: 194 VKRKGIE 200 KR G+E Sbjct: 186 PKRMGLE 192 >gi|57242609|ref|ZP_00370546.1| GTP-binding protein [Campylobacter upsaliensis RM3195] gi|57016538|gb|EAL53322.1| GTP-binding protein [Campylobacter upsaliensis RM3195] Length = 196 Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 16/202 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S+ FL + + +A E+AF GRSNVGKSSLIN L +K LA++S+ PG+TQ +N Sbjct: 3 SSATFLTSLAKFDPNFEANCAEVAFLGRSNVGKSSLINTLCKQKKLAKSSSTPGKTQLIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF K N + + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 63 FFEIKCKKNEEE--FKIHFIDLPGFGYAKVSKNLKEIWNKNLDEFLKLRTSIKLFLHLID 120 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RH +ID DV +L Q +L TK DKL+ + +KTK L ++ + Sbjct: 121 ARHTNLEIDLDVDVYLKSFLRGDQQILKVFTKADKLNQS------QKTK-LKNDFENS-- 171 Query: 187 EVIPTSSVKRKGIEVLRKAILE 208 + S++ + G+ +L ILE Sbjct: 172 --LLISNLNKSGLTLLENIILE 191 >gi|149199892|ref|ZP_01876921.1| probable GTP binding protein [Lentisphaera araneosa HTCC2155] gi|149137063|gb|EDM25487.1| probable GTP binding protein [Lentisphaera araneosa HTCC2155] Length = 205 Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 97/192 (50%), Gaps = 14/192 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + E G L I F+GRSN GKSSL+N L R +A+ S PG+T+ +N F S Sbjct: 19 LKESGALAGKSEKRIVFAGRSNAGKSSLLNCLT-RSKIAQISREPGKTRKVNLF---HCS 74 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQ 136 LK L D+PGYG+A+ KK W LI YL ++R + + L+ DCRHG Sbjct: 75 FLKK-----VLADLPGYGFAKRTKKERRLWEELITSYLDADRDNIERIILVTDCRHGPAD 129 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVK 195 D D F +VL+K DKL+ + ++ K L+++ + PE SS+K Sbjct: 130 SDLDAMQFFKDHGFQVTVVLSKSDKLNQKATSKRRKEIKELLQD---SKPEKTFWISSLK 186 Query: 196 RKGIEVLRKAIL 207 G+ L + I+ Sbjct: 187 GTGVRELSRDIV 198 >gi|50729618|ref|XP_416585.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 280 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/183 (37%), Positives = 97/183 (53%), Gaps = 19/183 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKN 81 P + PE+ F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 97 PPSALPEVCFIGRSNVGKSSLIRALFSLAPEVEVRVSKTPGHTKKMNFFNVGKYFT---- 152 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVDMPGYGY RAP+ VD ++ YL ER L+ +LL+D G++ D Sbjct: 153 ------LVDMPGYGY-RAPEDFVD----MVEAYLQERHNLKRTFLLVDAVVGIQSTDLIA 201 Query: 142 FSFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L++ + Y +VLTKID+ S + L K++ P++ SSV+ G+ Sbjct: 202 VEMLEEFGIPYVMVLTKIDRASKGLLLKNVLGIQKFVKEKTQGCFPQLFLVSSVEFSGVH 261 Query: 201 VLR 203 +LR Sbjct: 262 LLR 264 >gi|225560909|gb|EEH09190.1| GTP-binding protein [Ajellomyces capsulatus G186AR] Length = 362 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 9/143 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E +P + PE+ F GRSNVGKSSL+N ++ K L TS+ GRT+ LN + Sbjct: 83 EFRTIPMSDVPEVVFLGRSNVGKSSLLNAIME-KGLCFTSSKVGRTRTLNAY---GIGGR 138 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K+ + LVD PGYG K + + WG +I++YL++R LR ++L+D HG+K D Sbjct: 139 KDGEAKVVLVDTPGYG-----KGSHEEWGEVIMKYLTKRRQLRRTFVLLDSHHGIKPADA 193 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 + S L AV +Q++L+K D + Sbjct: 194 AILSLLRSAAVPHQVILSKADSV 216 >gi|307111038|gb|EFN59273.1| hypothetical protein CHLNCDRAFT_17068 [Chlorella variabilis] Length = 205 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 60/148 (40%), Positives = 78/148 (52%), Gaps = 9/148 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P A PE A GRSNVGKSSLIN+L R LA S PG+T+ +N F Sbjct: 10 FVKSSTSVEQCPPARYPEFAVIGRSNVGKSSLINMLTGRNALAMVSKTPGKTRLINHF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L N A LVD+PGYGYARA K +V W Y ER TL V LL+D Sbjct: 68 -----LING--AWFLVDLPGYGYARASKGSVVEWNRFTREYFVERETLVTVLLLVDSSIP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 +D ++ + + + +V TK+DK Sbjct: 121 PMPLDISCAAWFAEAGIPFTVVFTKLDK 148 >gi|330723278|gb|AEC45648.1| GTPase EngB [Mycoplasma hyorhinis MCLD] Length = 184 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 17/188 (9%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F++ + + EI GRSNVGKSSLIN L N+K +A+TS PGRTQ +NFF Sbjct: 2 WTFIKSAADKFSWFEHLAQEICLIGRSNVGKSSLINALANQK-IAKTSKQPGRTQLINFF 60 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N +VD+PGYG+A+ ++ Y R+ L+ ++LID Sbjct: 61 Y---------NQQKQVIVDLPGYGFAKISISQKSLISSMLEEYFKSRTNLKITFILIDSN 111 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G+ +D + FL + + I+ TKIDK++ + + + + L NY E Sbjct: 112 VGITSLDLQMLDFLKQLKRNVVIIATKIDKINQSQKYKITKAIQEL--NY-----ECFLV 164 Query: 192 SSVKRKGI 199 SS K+ GI Sbjct: 165 SSAKKIGI 172 >gi|303311121|ref|XP_003065572.1| GTPase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240105234|gb|EER23427.1| GTPase family protein [Coccidioides posadasii C735 delta SOWgp] gi|320039387|gb|EFW21321.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 323 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/153 (40%), Positives = 89/153 (58%), Gaps = 9/153 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + ++L G +P + PEIAF GRSNVGKSS+IN LV +++ +S+ PGRT+ Sbjct: 86 SKHSPVYLWGSSLFRTIPVSSIPEIAFIGRSNVGKSSIINGLVG-EDICASSSKPGRTKL 144 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 + + + ALVD PGYG K + WG I +YL +R LR ++LL Sbjct: 145 MASIGVGGTKGGGSKI---ALVDTPGYG-----KGSHTEWGQEIQKYLEKRKQLRRIFLL 196 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 ID G+K D V +FL + A+ YQ+VLTK+D Sbjct: 197 IDAGVGLKTRDHQVLNFLRRFAIPYQLVLTKLD 229 >gi|315453174|ref|YP_004073444.1| putative GTP-binding protein Engb [Helicobacter felis ATCC 49179] gi|315132226|emb|CBY82854.1| probable GTP-binding protein Engb [Helicobacter felis ATCC 49179] Length = 205 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 6/161 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FLR + P A PE+ F GRSNVGKS+LIN ++ RK LA++S PG+TQ NFF Sbjct: 11 FLRSAYNLAQCPPACMPEVVFVGRSNVGKSTLINTILERK-LAKSSATPGKTQAANFFCT 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + + +D+PG+GYA+ K+ W + L +RS+++ + LID RH Sbjct: 70 R-WQIPPAKILDFICIDLPGFGYAKVSKEIKGQWAVFLSDLLIQRSSIKLILHLIDARHP 128 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETL 171 +D +V FL+ + + + V TK DKLS AQ TL Sbjct: 129 HLPLDVEVRGFLESVLRPDQTLKRVYTKFDKLS-KNAQHTL 168 >gi|150021370|ref|YP_001306724.1| ribosome biogenesis GTP-binding protein YsxC [Thermosipho melanesiensis BI429] gi|149793891|gb|ABR31339.1| small GTP-binding protein [Thermosipho melanesiensis BI429] Length = 191 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 18/175 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E F GRSNVGKS+L+N L N+A+ S PG+T +NF+ NNL VD Sbjct: 21 EFVFVGRSNVGKSTLLNTLTGT-NIAKISKKPGKTASVNFYKI-------NNL--FYFVD 70 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 +PGYG+A+ +K W +I Y R ++ V+LLID RH +++ D+ + ++L Sbjct: 71 LPGYGFAKVSEKERIRWKQIIEMYFESRFWNIKIVFLLIDGRHELQKNDEQMINWLKDLD 130 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAHPEVIPTSSVKRKGI-EVL 202 + + I+LTKIDKL + + + K L NY +IP S++ ++G+ E+L Sbjct: 131 LQFSIILTKIDKLKMSEKSKMISYYKRLFGENYI-----IIPYSAITKEGVNEIL 180 >gi|323456296|gb|EGB12163.1| hypothetical protein AURANDRAFT_61460 [Aureococcus anophagefferens] Length = 510 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 96/181 (53%), Gaps = 33/181 (18%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-- 71 F+ G + LPK+G PE+A GRSNVGKSSL+N++ NR++ A TS PG+TQ N+F Sbjct: 273 FVTGAVSMDTLPKSGRPEVALVGRSNVGKSSLVNMITNRRSAAFTSKKPGKTQQFNYFDV 332 Query: 72 -VPKD------FSNLKNN-LPA-------------MALVDMPGYGYARAPKKNVDSWGGL 110 P D F++ + PA LVD+PG GYA AP D+W L Sbjct: 333 NAPGDDARRPRFASANDGTAPAPRPRKRPWAPPGRFFLVDVPGSGYALAPGAARDAWAAL 392 Query: 111 IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ----------IVLTKID 160 + RYL+ER+ + V L+D R G + D ++F+ + + + +VLTK D Sbjct: 393 LERYLAERADVVVVLHLVDARVGAQPTDAELFALTARCDAARRDRGLEPLRPVLVLTKAD 452 Query: 161 K 161 K Sbjct: 453 K 453 >gi|72080781|ref|YP_287839.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma hyopneumoniae 7448] Length = 184 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 85/169 (50%), Gaps = 14/169 (8%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL+ PE P+ AF GRSNVGKS+LIN L N+K +A+TS PGRTQ LNF+ Sbjct: 10 WKFLKSCPENCY----SDPQFAFIGRSNVGKSTLINALANKK-IAKTSTKPGRTQLLNFY 64 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N VD+PGYGYA K +I Y + + V+L++D R Sbjct: 65 ---------KNESEKLFVDLPGYGYAAVSKTKKHQIDRIIAGYFQKDQPISAVFLILDAR 115 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 G +D + ++ ++ I+ KIDK + +T L + K L N Sbjct: 116 VGFTNLDYIMIEYIIQQGFKLHILANKIDKTNQSTRAILLNQCKKLKLN 164 >gi|119194617|ref|XP_001247912.1| hypothetical protein CIMG_01683 [Coccidioides immitis RS] Length = 323 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/153 (40%), Positives = 89/153 (58%), Gaps = 9/153 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + ++L G +P + PEIAF GRSNVGKSS+IN LV +++ +S+ PGRT+ Sbjct: 86 SKHSPVYLWGSSLFRTIPVSSIPEIAFIGRSNVGKSSIINGLVG-EDICASSSKPGRTKL 144 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 + + + ALVD PGYG K + WG I +YL +R LR ++LL Sbjct: 145 MASIGVGGTKGGGSKI---ALVDTPGYG-----KGSHTEWGQEIHKYLEKRKQLRRIFLL 196 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 ID G+K D V +FL + A+ YQ+VLTK+D Sbjct: 197 IDAGVGLKTRDHQVLNFLRRFAIPYQLVLTKLD 229 >gi|291400673|ref|XP_002716748.1| PREDICTED: GTP-binding protein 8 isoform 2 [Oryctolagus cuniculus] Length = 289 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/178 (38%), Positives = 96/178 (53%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAM 86 PE+ F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 111 PEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSQKPGHTKKMNFFKVGKYFT--------- 161 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVDMPGYGY RAP+ VD ++ YL ER L+ +LL+D G+ + D + Sbjct: 162 -LVDMPGYGY-RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVGITKTDNIAIEMCE 215 Query: 147 KKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + A+ Y +VLTK DK S ++ L+ K++ P++ P S+V GI +L+ Sbjct: 216 EFALPYVMVLTKTDKSSKGHLLKQVLQIQKFVNMQTQGCFPQLFPVSAVTHSGIHLLK 273 >gi|326490668|dbj|BAJ90001.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326495488|dbj|BAJ85840.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 307 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 72/191 (37%), Positives = 90/191 (47%), Gaps = 12/191 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A GRSNVGKSSLIN L RK A TS PG+TQ +N +L N Sbjct: 120 PKDDRPEFAVLGRSNVGKSSLINSLTRRKEAALTSKKPGKTQTINH-------HLINK-- 170 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYG+A A K W Y R +L V LL+D +QID D ++ Sbjct: 171 SWYLVDLPGYGFAAASKTARMDWSSFTKGYFLNRDSLVGVLLLVDASVPTQQIDLDCANW 230 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP---TSSVKRKGIEV 201 L + V V TK DK+ E K + N + +P P TSS G E Sbjct: 231 LGRNNVGLTFVFTKCDKVKKGKGGRPDENIKEFLENIGSLYPRPPPWIMTSSTTGLGREG 290 Query: 202 LRKAILETINY 212 L + + NY Sbjct: 291 LLLHMSQLRNY 301 >gi|304373098|ref|YP_003856307.1| GTPase EngB [Mycoplasma hyorhinis HUB-1] gi|304309289|gb|ADM21769.1| GTPase EngB [Mycoplasma hyorhinis HUB-1] Length = 184 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 17/188 (9%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F++ + + EI GRSNVGKSSLIN L N+K +A+TS PGRTQ +NFF Sbjct: 2 WTFIKSAADKFSWFEHLAQEICLIGRSNVGKSSLINALANQK-IAKTSKQPGRTQLINFF 60 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N +VD+PGYG+A+ ++ Y R+ L+ ++LID Sbjct: 61 Y---------NQQKQVIVDLPGYGFAKISISQKSLISSMLEEYFKSRTNLKITFVLIDSN 111 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G+ +D + FL + + I+ TKIDK++ + + + + L NY E Sbjct: 112 VGITSLDLQMLDFLKQLKRNVVIIATKIDKINQSQKYKITKAIQEL--NY-----ECFLV 164 Query: 192 SSVKRKGI 199 SS K+ GI Sbjct: 165 SSAKKIGI 172 >gi|54020515|ref|YP_115958.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma hyopneumoniae 232] gi|81603640|sp|Q600K7|ENGB_MYCH2 RecName: Full=Probable GTP-binding protein EngB gi|53987688|gb|AAV27889.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232] Length = 198 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 85/169 (50%), Gaps = 14/169 (8%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL+ PE P+ AF GRSNVGKS+LIN L N+K +A+TS PGRTQ LNF+ Sbjct: 24 WKFLKSCPE----NCYSEPQFAFIGRSNVGKSTLINALANKK-IAKTSTKPGRTQLLNFY 78 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N VD+PGYGYA K +I Y + + V+L++D R Sbjct: 79 ---------KNESEKLFVDLPGYGYAAVSKTKKHQIDRIIAGYFQKDQPISAVFLILDAR 129 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 G +D + ++ ++ I+ KIDK + +T L + K L N Sbjct: 130 VGFTNLDYIMIEYIIQQGFKLHILANKIDKTNQSTRAILLNQCKKLKLN 178 >gi|303326799|ref|ZP_07357241.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio sp. 3_1_syn3] gi|302862787|gb|EFL85719.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio sp. 3_1_syn3] Length = 211 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 17/184 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+A +IA +GRSNVGKSSLIN L RK LA+ S PG+T+ +NF+ + ++ Sbjct: 20 LPEA---QIALAGRSNVGKSSLINALAGRKKLAKVSATPGKTRSVNFYRVEPYN------ 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYARA + W L+ YL++ TL+ + LL+DCR +++D ++ S Sbjct: 71 --FYLVDLPGYGYARASHEERRKWAKLLEHYLADCKTLKALALLLDCRLPPQKLDLELAS 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 F + VLTK DK S ++ + L+ P + TSS R G+E Sbjct: 129 FARGCCLPLLPVLTKADKCSQRERAARQKEWQELLNVKP------VLTSSSSRLGMEEFW 182 Query: 204 KAIL 207 +A++ Sbjct: 183 RALI 186 >gi|325474715|gb|EGC77901.1| GTP-binding protein engB [Treponema denticola F0402] Length = 212 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 11/161 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++G + P+ G E AF GRSN GKSSLIN+LVNRKNL +T + PG T+ +NFF+ Sbjct: 8 FIKGAVKAEQFPEIGVSEFAFFGRSNAGKSSLINMLVNRKNLVKTGSRPGMTREVNFFLV 67 Query: 74 KDFSNLKNN-------LPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 ++L N PA L D+PGYGYA+ ++ Y + R L+ Sbjct: 68 NRLASLNFNPKTKKFSGPAPKDMFVLTDLPGYGYAKLSGGMTLQIDKMLYEYCTNRPLLK 127 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 ++ L+D R + +++ F + IV TK DK+ Sbjct: 128 TIFFLMDMRREPTETEKESIGFFHGLNIEVVIVGTKADKIG 168 >gi|119369216|sp|Q4A7S3|ENGB_MYCH7 RecName: Full=Probable GTP-binding protein EngB gi|144575461|gb|AAZ53816.2| GTP-binding protein [Mycoplasma hyopneumoniae 7448] Length = 198 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/173 (35%), Positives = 86/173 (49%), Gaps = 14/173 (8%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + W FL+ PE P+ AF GRSNVGKS+LIN L N+K +A+TS PGRTQ Sbjct: 20 VEKVWKFLKSCPE----NCYSDPQFAFIGRSNVGKSTLINALANKK-IAKTSTKPGRTQL 74 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LNF+ N VD+PGYGYA K +I Y + + V+L+ Sbjct: 75 LNFY---------KNESEKLFVDLPGYGYAAVSKTKKHQIDRIIAGYFQKDQPISAVFLI 125 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 +D R G +D + ++ ++ I+ KIDK + +T L + K L N Sbjct: 126 LDARVGFTNLDYIMIEYIIQQGFKLHILANKIDKTNQSTRAILLNQCKKLKLN 178 >gi|224373216|ref|YP_002607588.1| GTP-binding protein [Nautilia profundicola AmH] gi|223588958|gb|ACM92694.1| GTP-binding protein [Nautilia profundicola AmH] Length = 189 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 21/200 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P I + E+A GRSNVGKSS +N N+K +A+TS PG+T+ +NFF Sbjct: 5 FITSAPSIKEAIEPNFTEVALLGRSNVGKSSFLNAFTNQK-IAKTSQTPGKTRLINFFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D + LVD+PG+GYA+ K + WG + +L R ++ L D RH Sbjct: 64 ED------DGKKYVLVDLPGFGYAKVSKSMLKDWGKNLDEFLKNRFNIKLFIHLRDARHP 117 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 ID +V +++ +K + TKIDKL Q L K K +P+ + Sbjct: 118 DLDIDNNVDEYINSFKRKDQQLLTIFTKIDKLK----QSELAKLK-------QKYPDALY 166 Query: 191 TSSVKRKGIEVLRKAILETI 210 S++K++G + +++ I E + Sbjct: 167 VSNMKKRGFDQVKRKINEIL 186 >gi|109896346|ref|YP_659601.1| GTP-binding protein, HSR1-related [Pseudoalteromonas atlantica T6c] gi|119369232|sp|Q160A3|ENGB_PSEA6 RecName: Full=Probable GTP-binding protein EngB gi|109698627|gb|ABG38547.1| cell division checkpoint GTPase YihA [Pseudoalteromonas atlantica T6c] Length = 206 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 9/145 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I L E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F D Sbjct: 13 APDISHLSADQGIEVAFAGRSNAGKSSALNRLTRQKSLARTSKTPGRTQLINVF---DLD 69 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + L+D+PGYGYA+ P W + YL +R +L+ + +L+D RH K + Sbjct: 70 EDRR------LIDLPGYGYAKVPMAIKLKWQKSLGEYLQKRESLKGLVVLMDIRHPFKDL 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL 162 DQ++ + + +LTK DKL Sbjct: 124 DQELIQWAVAADLPVLGLLTKADKL 148 >gi|332304400|ref|YP_004432251.1| ribosome biogenesis GTP-binding protein YsxC [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171729|gb|AEE20983.1| ribosome biogenesis GTP-binding protein YsxC [Glaciecola agarilytica 4H-3-7+YE-5] Length = 206 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 81/145 (55%), Gaps = 9/145 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I L E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F D Sbjct: 13 APDISHLGADKGIEVAFAGRSNAGKSSALNRLTRQKSLARTSKTPGRTQLINVF---DLD 69 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + LVD+PGYGYA+ P W + YL +R +L+ + +L+D RH K + Sbjct: 70 EERR------LVDLPGYGYAKVPMAIKLKWQKSLGEYLQKRESLQGLVVLMDIRHPFKDL 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL 162 DQ++ + + +LTK DKL Sbjct: 124 DQELIQWAVAADLPVLGLLTKADKL 148 >gi|255082732|ref|XP_002504352.1| predicted protein [Micromonas sp. RCC299] gi|226519620|gb|ACO65610.1| predicted protein [Micromonas sp. RCC299] Length = 195 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 95/185 (51%), Gaps = 13/185 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 P G PE+A GRSNVGKSSL+N+L K+ A S+ PG TQH+N + V K + Sbjct: 18 PPDGLPEVAVIGRSNVGKSSLLNLLTKGKSGALVSSKPGTTQHINHYLVAKKW------- 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +VD+PGYG+A+A K++ + W Y + RS L V LLID + D + Sbjct: 71 ---WIVDLPGYGFAKASKESTEMWDRFTKEYFTTRSNLAGVLLLIDASIPPMEKDLEYAD 127 Query: 144 FLDKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 +L V + IV TK D+ P +++ + ++ P +I TSSV G E Sbjct: 128 WLITHNVPFTIVHTKCDRNKPGMPAVDTNIDELRRILDEKWHRLPSMISTSSVSHDGRED 187 Query: 202 LRKAI 206 + K I Sbjct: 188 VLKFI 192 >gi|302819613|ref|XP_002991476.1| hypothetical protein SELMODRAFT_133692 [Selaginella moellendorffii] gi|300140678|gb|EFJ07398.1| hypothetical protein SELMODRAFT_133692 [Selaginella moellendorffii] Length = 244 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 9/137 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ I P G PE+AF GRSNVGKSSL+N+L+ RK+LA S PG+TQ +N F+ Sbjct: 46 FIKSSDGIKDCPMDGFPEVAFVGRSNVGKSSLVNLLMERKSLALVSKKPGKTQLINHFLV 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYG+A APK W Y +R TL V LID Sbjct: 106 NK---------RWYLVDLPGYGFASAPKTLCVKWNEFTKDYFLKRKTLVMVVQLIDSSIP 156 Query: 134 VKQIDQDVFSFLDKKAV 150 V+QID D ++L + + Sbjct: 157 VQQIDIDCATWLKQHNI 173 >gi|159477681|ref|XP_001696937.1| hypothetical protein CHLREDRAFT_105231 [Chlamydomonas reinhardtii] gi|158274849|gb|EDP00629.1| predicted protein [Chlamydomonas reinhardtii] Length = 214 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 92/190 (48%), Gaps = 20/190 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PE AF GRSNVGKSSLIN L N LA+ S PG T+ +N ++ Sbjct: 9 FIKSSTRVADCPPDRIPEFAFIGRSNVGKSSLINSLTNNDRLAKVSKEPGMTKLINHYLI 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR-- 131 D + LVD+PGYG+A+A K N + W Y R L V LL+D Sbjct: 69 ND---------SWYLVDLPGYGFAKAGKSNREEWLRFTKDYFITRDNLVSVMLLVDSSLP 119 Query: 132 -----HGVKQIDQDVFSFLDKKAVSYQIVLTKID---KLSPTTAQETLEKTKYLIRNYPT 183 G + +D+D +L + V + IV TKID K PT A ++ K ++ Sbjct: 120 PQASGPGWRTVDRDCADWLAECEVPFCIVFTKIDNRKKDMPTNAA-NVKAFKQMMAEEWE 178 Query: 184 AHPEVIPTSS 193 A P TSS Sbjct: 179 ALPRCFETSS 188 >gi|319788336|ref|YP_004147811.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoxanthomonas suwonensis 11-1] gi|317466848|gb|ADV28580.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoxanthomonas suwonensis 11-1] Length = 206 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 9/183 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L +F Sbjct: 20 LPPDGGFEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVYF---------EVA 70 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P W + + R LR + +++D RH +K D+ + Sbjct: 71 PERYLVDLPGYGYAKVPMDLKAHWERFLDNWFRTREALRGLVVVMDIRHPLKDYDRQMID 130 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + + +LTK DKL + + + + V SS ++G++ R Sbjct: 131 YAVARGLPAHALLTKADKLGRGQQAQAVAAVRRELAAAGAGGVGVQAFSSENKQGVDEAR 190 Query: 204 KAI 206 + Sbjct: 191 AVV 193 >gi|302794304|ref|XP_002978916.1| hypothetical protein SELMODRAFT_110012 [Selaginella moellendorffii] gi|300153234|gb|EFJ19873.1| hypothetical protein SELMODRAFT_110012 [Selaginella moellendorffii] Length = 244 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 9/137 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ I P G PE+AF GRSNVGKSSL+N+L+ RK+LA S PG+TQ +N F+ Sbjct: 46 FIKSSDGIKDCPMDGFPEVAFVGRSNVGKSSLVNLLMERKSLALVSKKPGKTQLINHFLV 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYG+A APK W Y +R TL V LID Sbjct: 106 NK---------RWYLVDLPGYGFASAPKTLCVKWNEFTKDYFLKRKTLVMVVQLIDSSIP 156 Query: 134 VKQIDQDVFSFLDKKAV 150 V+QID D ++L + + Sbjct: 157 VQQIDIDCATWLKQHNI 173 >gi|242279364|ref|YP_002991493.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio salexigens DSM 2638] gi|259645890|sp|C6BUE5|ENGB_DESAD RecName: Full=Probable GTP-binding protein EngB gi|242122258|gb|ACS79954.1| GTP-binding protein HSR1-related [Desulfovibrio salexigens DSM 2638] Length = 201 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 12/150 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-- 71 ++ V EI L + P+I +GRSNVGKSSLIN L +RK LA+ S+ PG+T+ LN++ Sbjct: 7 LIKTVYEINQLEEIAAPQIILAGRSNVGKSSLINCLASRKKLAKISSTPGKTRSLNYYEV 66 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 P + +VD+PGYGYAR K W LI +YL + + + +L+D R Sbjct: 67 SPHGY----------YIVDLPGYGYARCSKTERAKWAKLIDKYLLDNAYVAAAAVLLDSR 116 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 H +Q D D+ S+ + ++TK DK Sbjct: 117 HNPQQNDLDLISYFKHCNIPIIPIMTKSDK 146 >gi|167626126|ref|YP_001676420.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella halifaxensis HAW-EB4] gi|189037189|sp|B0TNM9|ENGB_SHEHH RecName: Full=Probable GTP-binding protein EngB gi|167356148|gb|ABZ78761.1| GTP-binding protein HSR1-related [Shewanella halifaxensis HAW-EB4] Length = 226 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 15/189 (7%) Query: 14 FLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I L + P EIAF+GRSN GKSS +N+L +K +ARTS PGRTQ +N Sbjct: 13 FLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQK-IARTSKTPGRTQLIN 71 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F L VD+PGYG+A+ P W + YL +R L V +L+D Sbjct: 72 VFKLDKHRRL---------VDLPGYGFAQVPLALKLKWQQALGEYLLKRDCLSGVVVLMD 122 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +D + + + + +LTK DKL + + + + + + N+ A +V Sbjct: 123 IRHPLKDLDMQMIEWAVESHIPVLALLTKADKLGQSDRMKMVNEVRKKLSNFDDA-VKVE 181 Query: 190 PTSSVKRKG 198 P SS+K G Sbjct: 182 PFSSLKGIG 190 >gi|326484419|gb|EGE08429.1| GTP binding protein [Trichophyton equinum CBS 127.97] Length = 343 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 32/162 (19%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P++ PE+ F GRSNVGKSS+IN+LV +++ TS PGRTQ +N F +K Sbjct: 102 IPESDIPEVVFMGRSNVGKSSVINMLVG-EDICYTSATPGRTQTMNAF---GVGGMKGGE 157 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST----------------------- 120 + ++D PGYG A P+ WG +++YLS+R Sbjct: 158 TKINIIDSPGYGKASRPE-----WGHELMKYLSKRQQYVGSRFRFNSSRGILLTISNLDK 212 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 LR V+L+I+C+ GVK D++V S L + V +QI+++K D Sbjct: 213 LRRVFLIIECKAGVKNSDKEVLSILREFTVPHQIIVSKADNF 254 >gi|115451735|ref|NP_001049468.1| Os03g0232500 [Oryza sativa Japonica Group] gi|108707011|gb|ABF94806.1| GTP-binding protein, putative, expressed [Oryza sativa Japonica Group] gi|113547939|dbj|BAF11382.1| Os03g0232500 [Oryza sativa Japonica Group] gi|215766877|dbj|BAG99105.1| unnamed protein product [Oryza sativa Japonica Group] Length = 318 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 90/191 (47%), Gaps = 12/191 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A GRSNVGKSSLIN L+ RK A TS PG+TQ +N F L N Sbjct: 128 PKDDRPEFAVLGRSNVGKSSLINALIRRKEAALTSKKPGKTQTINHF-------LVNK-- 178 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYG+A A + W Y R TL V LL+D ++ID D ++ Sbjct: 179 SWYLVDLPGYGFAAASQSARTDWSSFTKGYFLNRDTLVGVLLLVDASIPPQKIDIDCANW 238 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP---TSSVKRKGIEV 201 L + + V TK DK E K + +PE P TSSV G + Sbjct: 239 LGRNNIGLTYVFTKCDKSKKGKGGRPEENIKEFQETISSLYPEPPPWIMTSSVTGLGRDG 298 Query: 202 LRKAILETINY 212 L + + NY Sbjct: 299 LLLHMSQLRNY 309 >gi|224044065|ref|XP_002189538.1| PREDICTED: similar to GTP-binding protein 8 [Taeniopygia guttata] Length = 238 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 99/183 (54%), Gaps = 19/183 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKN 81 P PE+ F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 55 PPPALPEVCFIGRSNVGKSSLIRALFSLAPEVEVRVSKTPGHTKKMNFFKVGKYFT---- 110 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVDMPGYGY R+P+ V+ ++ YL ER L+ +LL+D G+++ D Sbjct: 111 ------LVDMPGYGY-RSPQDFVE----MVEAYLQERHNLKRTFLLVDGVVGLQKTDHIA 159 Query: 142 FSFLDKKAVSYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L++ + Y +VLTKID+ S + LE +++ + P++ SSV+ G+ Sbjct: 160 VEMLEEFGIPYVMVLTKIDRASRGLLLKNVLEIQEFVKESTQGCFPQLFLVSSVEFSGVH 219 Query: 201 VLR 203 +LR Sbjct: 220 LLR 222 >gi|225848212|ref|YP_002728375.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium azorense Az-Fu1] gi|225644647|gb|ACN99697.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium azorense Az-Fu1] Length = 194 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/189 (34%), Positives = 103/189 (54%), Gaps = 18/189 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE+A GRSNVGKSSLIN + R ++A+ S+ PG+T+ +NFF L N++ Sbjct: 19 PPPDKPEVAVVGRSNVGKSSLINAIFKR-SVAKVSSTPGKTRLINFFT------LNNDI- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYG+A +K SW +I YL R L+ + +L+D R+ +D + + Sbjct: 71 --YFVDLPGYGFASVSQKERLSWQKMIENYLLNRENLKLIIMLVDTRYPPTNLDILMKQW 128 Query: 145 LDKKAVSYQIVLTKIDKLSPTT---AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 LD Y +V TKIDKL+ + A++ +++T L N P + S+ + GI+ Sbjct: 129 LDTFEKQYFVVGTKIDKLNQSEKAKAKKVIKETLDLDDNTP-----IFLVSAKEGTGIDN 183 Query: 202 LRKAILETI 210 L I + + Sbjct: 184 LVSEIFKAV 192 >gi|323697854|ref|ZP_08109766.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio sp. ND132] gi|323457786|gb|EGB13651.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio desulfuricans ND132] Length = 193 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 86/148 (58%), Gaps = 8/148 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ + EI L P+IA +GRSNVGKSSL+N L RK LA+ S+ PG+T+ LN++ Sbjct: 7 LVKTIYEIKQLEDVDAPQIALAGRSNVGKSSLVNRLAGRKALAKISSKPGKTRSLNYY-- 64 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ K+ W LI Y++ + L+ V +L+D R Sbjct: 65 ------RVDPDGYYLVDLPGYGYAKCSKQERIKWAKLIEAYITGNTHLKAVAVLLDARLS 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 +++D ++ ++ ++ VLTK DK Sbjct: 119 PQKLDLELTGYVRGLSIPVIPVLTKADK 146 >gi|269115169|ref|YP_003302932.1| putative GTP-binding protein engB [Mycoplasma hominis] gi|268322794|emb|CAX37529.1| Probable GTP-binding protein engB [Mycoplasma hominis ATCC 23114] Length = 183 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 21/192 (10%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL+ + + F GRSNVGKSSLIN L + N+A+TS+ PGRTQ +N+F Sbjct: 2 WKFLKSCKSHDDFINSDNIQYVFWGRSNVGKSSLINSLASC-NIAKTSSYPGRTQLINYF 60 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 KN + ++D+PGYGYA+ KK D +I Y + V LLID + Sbjct: 61 ESN-----KNKI----IIDLPGYGYAKISKKLQDKISFMIDFYFKNDKNNKKVLLLIDAK 111 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--- 188 G D ++ +L+ + + IV+TKIDK + + +Y ++N + V Sbjct: 112 IGFSASDLEIIEYLNDLKIKFDIVVTKIDKANQS--------QRYCVKNQALSLKTVENI 163 Query: 189 IPTSSVKRKGIE 200 SS K++GIE Sbjct: 164 FLVSSEKKQGIE 175 >gi|332286111|ref|YP_004418022.1| GTP-binding protein [Pusillimonas sp. T7-7] gi|330430064|gb|AEC21398.1| GTP-binding protein [Pusillimonas sp. T7-7] Length = 207 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 2/139 (1%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP E+ F GRSN GKSS IN+L N++ LA +S PGRT+ +N F D ++ Sbjct: 19 LPPPTTAEVCFVGRSNSGKSSAINVLTNQRRLAFSSKTPGRTRLINLFGIPD--PVEQGA 76 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA ++ + W ++ YL RS+L + +LID R GV ++D+ + Sbjct: 77 FLGFLVDLPGYGYASVAREAREEWADVLGGYLRSRSSLAGIVMLIDIRRGVTELDRRLAD 136 Query: 144 FLDKKAVSYQIVLTKIDKL 162 ++ +LTK DK Sbjct: 137 WIAPTGTPVLALLTKADKF 155 >gi|145486124|ref|XP_001429069.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124396159|emb|CAK61671.1| unnamed protein product [Paramecium tetraurelia] Length = 242 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 63/175 (36%), Positives = 94/175 (53%), Gaps = 24/175 (13%) Query: 38 SNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYA 97 SNVGKSSL+N L+ R N+A TSN PG+T+ L+F+ N + +VD PGYG+A Sbjct: 81 SNVGKSSLLNALLGR-NVAETSNYPGKTRSLDFY---------NLGQSKVIVDSPGYGFA 130 Query: 98 RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLT 157 + KK++ WG L+ Y+ L+ Y+LID HG K +D + + IV T Sbjct: 131 KGNKKDIQHWGYLMQYYIKNSPFLKQSYVLIDSEHGFKDVDAMTLQLMQSLEKPFTIVFT 190 Query: 158 KIDKLSP-----TTAQETLEKTKYLIRNYPTAHPEVIPTSSVK-RKGIEVLRKAI 206 K DK+S ++E LEK Y +V+ +SV+ R G+ L+++I Sbjct: 191 KCDKISKIDELVQKSRENLEKHIY--------SSQVLHFTSVRNRTGLVELQQSI 237 >gi|303291125|ref|XP_003064849.1| predicted protein [Micromonas pusilla CCMP1545] gi|226453875|gb|EEH51183.1| predicted protein [Micromonas pusilla CCMP1545] Length = 196 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 88/181 (48%), Gaps = 11/181 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G PE+A GRSNVGKSSL+N+L + A S+ PG TQ +N + L N+ Sbjct: 22 GLPEVALIGRSNVGKSSLLNLLTEGASGALVSSKPGTTQRINHY-------LVNH--KWW 72 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD+PGYGYA A + W Y RS L V LLID + D + +L + Sbjct: 73 IVDLPGYGYAEATEDETAKWEAFTKDYFVTRSNLAGVLLLIDASVPPQAKDAEYADWLIE 132 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVLRKA 205 V + IV TK D+ P K ++ R H P +IPTSSV G E + K Sbjct: 133 NNVPFTIVFTKCDRDKPGMPSVEENKAEFEARLEERWHRSPSMIPTSSVNADGREDVLKF 192 Query: 206 I 206 I Sbjct: 193 I 193 >gi|239608031|gb|EEQ85018.1| GTP binding protein [Ajellomyces dermatitidis ER-3] gi|327356496|gb|EGE85353.1| GTP binding protein [Ajellomyces dermatitidis ATCC 18188] Length = 341 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 9/143 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E +P + PE+AF GRSN GKSSL+N ++ KN+ TS G T LN + Sbjct: 79 EFRTIPMSDVPEVAFLGRSNSGKSSLLNAIME-KNMCFTSATLGLTTTLNAY---GIGGK 134 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K + LVD PGYG K + + WG I++YL++R LR Y+LI+ HG+K D Sbjct: 135 KGGEAKVVLVDTPGYG-----KGSNEEWGEEILKYLTKRKQLRRTYILINSHHGIKAADA 189 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 + S L AV +QI+L+K D + Sbjct: 190 AILSLLRANAVPHQIILSKADSV 212 >gi|156064673|ref|XP_001598258.1| hypothetical protein SS1G_00344 [Sclerotinia sclerotiorum 1980] gi|154691206|gb|EDN90944.1| hypothetical protein SS1G_00344 [Sclerotinia sclerotiorum 1980 UF-70] Length = 248 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 86/133 (64%), Gaps = 5/133 (3%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ F GRSNVGKSSL+N L+N KN A TS+ GRT+ +N F ++N + ++ Sbjct: 7 PEVCFLGRSNVGKSSLLNALLNNKNAAYTSSKVGRTRCMNAFAIGGHEGSEDNSDRLVVL 66 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG+ + WG I++YL +R L+ ++LID +HG+K++D+ + L + Sbjct: 67 DMPGYGHGGRSE-----WGKEIIKYLEKRKQLKRAFVLIDAQHGIKELDRVMLQMLRSRK 121 Query: 150 VSYQIVLTKIDKL 162 V +Q+VL+K+DK+ Sbjct: 122 VPHQVVLSKVDKI 134 >gi|332981499|ref|YP_004462940.1| ribosome biogenesis GTP-binding protein YsxC [Mahella australiensis 50-1 BON] gi|332699177|gb|AEE96118.1| ribosome biogenesis GTP-binding protein YsxC [Mahella australiensis 50-1 BON] Length = 202 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 10/152 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++G PE+ GRSNVGKSS +N + N + LA + PG+T+ +NF++ Sbjct: 19 PESGMPELVLLGRSNVGKSSFVNTIANNRKLAFIGSKPGKTRTINFYLING--------- 69 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFS 143 +VD+PGYGYA+ + D W I YL R + ++L+D RH + D+ ++ Sbjct: 70 RFYIVDLPGYGYAKVSMQEKDRWSESIETYLKSRIDNIAGAFMLLDIRHKPSEYDKLMWQ 129 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +L VS V K DKL+ + QE L+ K Sbjct: 130 WLRYYGVSTGFVAMKADKLNKSEVQEHLDMIK 161 >gi|261200064|ref|XP_002626433.1| GTP binding protein [Ajellomyces dermatitidis SLH14081] gi|239594641|gb|EEQ77222.1| GTP binding protein [Ajellomyces dermatitidis SLH14081] Length = 324 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 9/143 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E +P + PE+AF GRSN GKSSL+N ++ KN+ TS G T LN + Sbjct: 79 EFRTIPMSDVPEVAFLGRSNSGKSSLLNAIME-KNMCFTSATLGLTTTLNAY---GIGGK 134 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K + LVD PGYG K + + WG I++YL++R LR Y+LI+ HG+K D Sbjct: 135 KGGEAKVVLVDTPGYG-----KGSNEEWGEEILKYLTKRKQLRRTYILINSHHGIKAADA 189 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 + S L AV +QI+L+K D + Sbjct: 190 AILSLLRANAVPHQIILSKADSV 212 >gi|225874516|ref|YP_002755975.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium capsulatum ATCC 51196] gi|254783179|sp|C1F4C3|ENGB_ACIC5 RecName: Full=Probable GTP-binding protein EngB gi|225791507|gb|ACO31597.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium capsulatum ATCC 51196] Length = 211 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 83/163 (50%), Gaps = 6/163 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R P PE AF GRSNVGKSSLIN L+ K A+ S+ PGRT+ +NFF Sbjct: 7 FMRSAMATEHFPPVTAPEFAFLGRSNVGKSSLINALLGSKQ-AKVSSTPGRTRAINFF-- 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + P D+PGYGYA+ K W I YL+ER +L L+D Sbjct: 64 SLTTSPERQQPNFLFADLPGYGYAKISKSISAEWPKFIEPYLAERPSLALCLCLVDSNIP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP---TTAQETLEK 173 + D + FL Y +V TK D+LS T A++TL + Sbjct: 124 PQPSDAQLTEFLRSIGRPYLVVATKADRLSGNGRTKAKQTLSR 166 >gi|315638535|ref|ZP_07893711.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter upsaliensis JV21] gi|315481379|gb|EFU72007.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter upsaliensis JV21] Length = 196 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 16/202 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S+ FL + + +A E+AF GRSNVGKSSLIN L +K LA++S+ PG+TQ +N Sbjct: 3 SSATFLTSLAKFDPNFEANCAEVAFLGRSNVGKSSLINTLCKQKKLAKSSSTPGKTQLIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF K N + + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 63 FFEIKCKKNEEE--FKIHFIDLPGFGYAKVSKNLKEIWNKNLDEFLKLRTSIKLFLHLID 120 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RH +ID V ++L Q +L TK DKL+ + K ++N+ Sbjct: 121 ARHTNLEIDLSVDAYLKSFLRGDQQILKIFTKADKLNQS--------QKARLKNH---FE 169 Query: 187 EVIPTSSVKRKGIEVLRKAILE 208 + S++ + G+ +L ILE Sbjct: 170 NSLLISNLNKSGLALLENIILE 191 >gi|212637751|ref|YP_002314276.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella piezotolerans WP3] gi|226741186|sp|B8CVL3|ENGB_SHEPW RecName: Full=Probable GTP-binding protein EngB gi|212559235|gb|ACJ31689.1| GTP-binding protein EngB [Shewanella piezotolerans WP3] Length = 224 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 14/175 (8%) Query: 14 FLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I L + P EIAF+GRSN GKSS +N+L +K +ARTS PGRTQ +N Sbjct: 13 FLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQK-IARTSKTPGRTQLIN 71 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F L VD+PGYG+A+ P W + YL +R L V +L+D Sbjct: 72 VFKLDKHRRL---------VDLPGYGFAQVPLALKKKWQQALGEYLLKRECLSGVVVLMD 122 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 RH +K +D + + + + +LTK DKL + + + + + + N+ A Sbjct: 123 IRHPLKDLDMQMIEWAVESDIPVLALLTKADKLGQSARMKMVNEVRKKLSNFDDA 177 >gi|157959931|ref|YP_001499965.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella pealeana ATCC 700345] gi|189037190|sp|A8GYP3|ENGB_SHEPA RecName: Full=Probable GTP-binding protein EngB gi|157844931|gb|ABV85430.1| GTP-binding protein HSR1-related [Shewanella pealeana ATCC 700345] Length = 225 Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 17/200 (8%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPP----EIAFSGRSNVGKSSLINILVNRKNLART 58 SH F K+ FL P+I L + P EIAF+GRSN GKSS +N+L +K +ART Sbjct: 4 SHIDFRKAE--FLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQK-IART 60 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F L VD+PGYG+A+ P W + YL +R Sbjct: 61 SKTPGRTQLINVFRLDKHRRL---------VDLPGYGFAQVPLALKLKWQESLGEYLLKR 111 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 L V +L+D RH +K +D + + + + +LTK DKL + + + + + + Sbjct: 112 DCLSGVVVLMDIRHPLKDLDMQMIEWAVESHIPVLALLTKADKLGQSARMKMVNEVRKKL 171 Query: 179 RNYPTAHPEVIPTSSVKRKG 198 ++ +V P SS+K G Sbjct: 172 SHFEDG-VKVEPFSSLKGIG 190 >gi|302504401|ref|XP_003014159.1| GTP binding protein (EngB), putative [Arthroderma benhamiae CBS 112371] gi|291177727|gb|EFE33519.1| GTP binding protein (EngB), putative [Arthroderma benhamiae CBS 112371] Length = 343 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 32/162 (19%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P++ PE+ F GRSNVGKSS+IN+LV +++ TS PGRTQ +N F K Sbjct: 102 IPESDVPEVVFMGRSNVGKSSVINMLVG-EDICYTSATPGRTQTMNAF---GIGGTKGGE 157 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST----------------------- 120 + ++D PGYG A P+ WG +++YLS+R Sbjct: 158 TKINIIDSPGYGKASRPE-----WGHELMKYLSKRQQYVGSRSRSDSNCEILLTIPNLDR 212 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 LR V+L+I+C+ GVK D++V S L + V +QI+++K D Sbjct: 213 LRRVFLIIECKAGVKNSDKEVLSILREFTVPHQIIVSKADNF 254 >gi|34396175|gb|AAP55641.1| GTP binding protein [Spiroplasma citri] gi|110004356|emb|CAK98694.1| probable gtp binding protein [Spiroplasma citri] Length = 199 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 8/139 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIAF G+SNVGKSS +N+L N++ LA+ S PG+T+ LNFF ++ NN +VD Sbjct: 26 EIAFLGKSNVGKSSFLNMLTNQRQLAKVSQIPGKTRMLNFF------SINNN--QFRIVD 77 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PGYG+A+ + + ++ YL++R L+ V LL+D RH Q D +++ +L + Sbjct: 78 APGYGFAKVGNQYKMDFAKMMEEYLTQRENLKFVCLLVDLRHPPTQDDYEMYQYLKHFNI 137 Query: 151 SYQIVLTKIDKLSPTTAQE 169 ++ TK+DK+ Q+ Sbjct: 138 LTVLIGTKLDKVKKNDIQK 156 >gi|289547931|ref|YP_003472919.1| ribosome biogenesis GTP-binding protein YsxC [Thermocrinis albus DSM 14484] gi|289181548|gb|ADC88792.1| ribosome biogenesis GTP-binding protein YsxC [Thermocrinis albus DSM 14484] Length = 171 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 17/180 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GRSNVGKSSLIN+L+ +K +A S PGRT+ + F +P F + LV Sbjct: 8 PHVVLVGRSNVGKSSLINMLLGKKVVA-VSKDPGRTRRVTF-IP--FGE------KVYLV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-RCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D+PGYGYAR + ++W ++ Y S L + V+LLID R GV +D + +L + Sbjct: 58 DVPGYGYARVSHREREAWRRMMEEYFSRYGELIKWVFLLIDSRVGVTPLDVQMIEWLHYR 117 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + Y++VLTK+D Q+ + +R + T E++ TSS + KG + L + L+ Sbjct: 118 KLPYKVVLTKVD----AATQDEISSAIKSVRKHTTV--EILFTSSREGKGKKELLQYCLD 171 >gi|94676499|ref|YP_588584.1| GTP-binding protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|119368791|sp|Q1LTY0|ENGB_BAUCH RecName: Full=Probable GTP-binding protein EngB gi|94219649|gb|ABF13808.1| GTP-binding protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 202 Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 10/190 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL I L EIAF+G SNVGKSS+IN L N+KNLARTS PG T+ +N F Sbjct: 12 FLFSTSCIKNLLYNVSKEIAFTGSSNVGKSSVINTLTNQKNLARTSKKPGSTKTVNVFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P + L+D+PGYGY P W ++ +L + + L+ + +L+D RH Sbjct: 72 E---------PGVNLIDLPGYGYVTMPVALKYHWQHDLIYFLQKCTNLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+ + + + I+L K DK++ + + N ++ ++ SS Sbjct: 123 MKFLDKYIIQCAIENKIQVFILLNKADKMNAYACNTQYHTVQQHLSNLE-SNIKITLFSS 181 Query: 194 VKRKGIEVLR 203 V + GI+ L+ Sbjct: 182 VTKLGIKKLK 191 >gi|302660413|ref|XP_003021886.1| GTP binding protein (EngB), putative [Trichophyton verrucosum HKI 0517] gi|291185805|gb|EFE41268.1| GTP binding protein (EngB), putative [Trichophyton verrucosum HKI 0517] Length = 343 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 32/162 (19%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P++ PE+ F GRSNVGKSS+IN+LV +++ TS PGRTQ +N F K Sbjct: 102 IPESDIPEVVFMGRSNVGKSSVINMLVG-EDICYTSATPGRTQTMNAF---GIGGTKGGE 157 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST----------------------- 120 + ++D PGYG A P+ WG +++YLS+R Sbjct: 158 TKINIIDSPGYGKASRPE-----WGHELMKYLSKRQQYVDSRFHSNSNCGILLTIPNLDR 212 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 LR V+L+I+C+ GVK D++V S L + V +QI+++K D Sbjct: 213 LRRVFLIIECKAGVKNSDKEVLSILREFTVPHQIIVSKADNF 254 >gi|242036437|ref|XP_002465613.1| hypothetical protein SORBIDRAFT_01g042170 [Sorghum bicolor] gi|241919467|gb|EER92611.1| hypothetical protein SORBIDRAFT_01g042170 [Sorghum bicolor] Length = 310 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 89/191 (46%), Gaps = 12/191 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A GRSNVGKSSLIN L RK A TS PG+TQ +N F L N Sbjct: 123 PKDDRPEFAVLGRSNVGKSSLINALTRRKEAALTSKKPGKTQTINHF-------LVNK-- 173 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD+PGYG+A A + W Y R TL V LLID ++ID D ++ Sbjct: 174 SWYLVDLPGYGFAAASQSARMDWSSFTKGYFLNRDTLVGVLLLIDASIPPQKIDLDCANW 233 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP---TSSVKRKGIEV 201 L + + V TK DK+ E K +P+ P TSSV G + Sbjct: 234 LGRNNIGLTFVFTKCDKVKKGKGGRPDENIKQFQETISGLYPDPPPWIMTSSVTGLGRDG 293 Query: 202 LRKAILETINY 212 L + + NY Sbjct: 294 LLLHMSQLRNY 304 >gi|71032165|ref|XP_765724.1| hypothetical protein [Theileria parva strain Muguga] gi|68352681|gb|EAN33441.1| GTP-binding protein, putative [Theileria parva] Length = 230 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 100/201 (49%), Gaps = 28/201 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLIN--------------ILVNRKNL-----ARTSNAPGRT 65 P P+IAF G SNVGKSSLIN I+ N K L A S PGRT Sbjct: 21 PLTKIPQIAFVGYSNVGKSSLINSILYGTDIPFFARKIVSNAKMLKNPKFAPVSKTPGRT 80 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 +HL F +L NN+ +LVD+PGYG A+ + + W L+ +YL L + Sbjct: 81 RHLFTF------DLGNNI---SLVDLPGYGCAKVSDEVRNEWSLLVNKYLDRTDNLYRIL 131 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 L+D G + D ++S L++ + +Q+VLTK D+L P K +++++Y Sbjct: 132 SLVDSMKGPVKEDFKLWSMLNEIEIPFQVVLTKCDRLKPEELHLKYSKLIHILKDYEIFD 191 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 V TS+ + GI LR +I Sbjct: 192 QYVYATSATRLLGIHELRLSI 212 >gi|242789725|ref|XP_002481422.1| GTP binding protein (EngB), putative [Talaromyces stipitatus ATCC 10500] gi|218718010|gb|EED17430.1| GTP binding protein (EngB), putative [Talaromyces stipitatus ATCC 10500] Length = 332 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 80/133 (60%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF G++NVGKSSLIN LV+ + R+ + G+T +N + K + L+ Sbjct: 100 PEVAFLGKTNVGKSSLINALVD-DEICRSGDKRGKTTEMNAY---GIGGTKGGESKIVLL 155 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG P++ G I++YL R LR Y+LID HG+K DQ + + L + A Sbjct: 156 DMPGYGAGSRPEQ-----GEEIMKYLKNRKQLRRTYILIDLLHGIKPHDQQILTLLRQYA 210 Query: 150 VSYQIVLTKIDKL 162 + +Q++++K+D++ Sbjct: 211 IPHQLIVSKVDRI 223 >gi|237755489|ref|ZP_04584111.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium yellowstonense SS-5] gi|237692353|gb|EEP61339.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium yellowstonense SS-5] Length = 197 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 88/162 (54%), Gaps = 13/162 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEIA GRSNVGKSSLIN + R ++A+ S PG+T+ +NFF+ D Sbjct: 19 FPPPNKPEIAIVGRSNVGKSSLINAIFKR-SIAKVSATPGKTRLINFFLLND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYG+A K +W +I YL R L + +L+D R+ +D + Sbjct: 70 -DIYFVDLPGYGFAAVSHKEKQNWKRMIEDYLLNRENLNLIIMLVDTRYPPTNLDVLMKE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTT---AQETLEKTKYLIRNYP 182 +L+ Y +V TKIDKL+ + A++ + +T L +N P Sbjct: 129 WLESFEKPYIVVGTKIDKLNQSEKAKAEKVIRETLDLSKNVP 170 >gi|42528074|ref|NP_973172.1| hypothetical protein TDE2574 [Treponema denticola ATCC 35405] gi|81570149|sp|Q73K17|ENGB_TREDE RecName: Full=Probable GTP-binding protein EngB gi|41819119|gb|AAS13091.1| conserved hypothetical protein TIGR00650 [Treponema denticola ATCC 35405] Length = 212 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 11/161 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++G + P+ G E AF GRSN GKSSLIN+LVNRKNL +T + PG T+ +NFF+ Sbjct: 8 FIKGAVKAEQFPEIGVSEFAFFGRSNAGKSSLINMLVNRKNLVKTGSRPGMTREVNFFLV 67 Query: 74 KDFSNLKNN-------LPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 ++L N PA L D+PGYGYA+ ++ Y + R L+ Sbjct: 68 NRPASLNFNPKTKKFSGPAPKDMFVLTDLPGYGYAKLSGGMTLQIDKMLYEYCTNRPLLK 127 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 ++ L+D R + +++ F + IV TK DK+ Sbjct: 128 IIFFLMDMRREPTETEKESIGFFHGLNIEVVIVGTKADKIG 168 >gi|13508220|ref|NP_110169.1| GTPase EngB [Mycoplasma pneumoniae M129] gi|2501553|sp|P75303|ENGB_MYCPN RecName: Full=Probable GTP-binding protein EngB gi|1674038|gb|AAB96008.1| GTP-binding, era-like [Mycoplasma pneumoniae M129] gi|301633351|gb|ADK86905.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma pneumoniae FH] Length = 193 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 17/196 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ ++ P+ E+ F GRSNVGKSSLIN +K LA+TS PGRTQ LNFF Sbjct: 5 FLKSASDLESCPQDSVKEVCFMGRSNVGKSSLINAFFQKK-LAKTSATPGRTQLLNFF-- 61 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 VD+PGYG+A+ K ++ L+ ++L+ R L V L+ID G Sbjct: 62 --------EYNRKRFVDLPGYGFAKLSKVQKEAITNLLTQFLNFRQNLTGVVLVID--SG 111 Query: 134 VKQI-DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 V + DQ+V + + +++ ++ K DKL+ + T K + ++ P + + S Sbjct: 112 VVTVQDQEVVKTILQTGLNFLVIANKFDKLNQSERFHTQNKLAHFLKVNPN---KCLFVS 168 Query: 193 SVKRKGIEVLRKAILE 208 + ++V+ K I E Sbjct: 169 AKTGYNLQVMHKQIFE 184 >gi|299137574|ref|ZP_07030755.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium sp. MP5ACTX8] gi|298600215|gb|EFI56372.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium sp. MP5ACTX8] Length = 204 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 92/185 (49%), Gaps = 11/185 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK-NNLPAMAL 88 PE+AF GRSNVGKSSLIN L+ K A+ S+ PGRT+ +NFF D + K P++ Sbjct: 27 PEVAFLGRSNVGKSSLINKLLGSKE-AKVSSTPGRTRAINFFALHDGTPQKFAARPSLIF 85 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D+PGYGYA+ K W I YL+ER L L+D ++ D + + L + Sbjct: 86 ADLPGYGYAKISKSISAEWPTFIEPYLNEREQLSLCICLVDSNIPPQESDTMLINALQQM 145 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 Y +V TK D+L ++L K AH ++P SS G++ L I Sbjct: 146 QRPYLVVATKSDRLGGNQLTKSLTALK-------KAHSVDRILPVSSKTEAGVKTLWPEI 198 Query: 207 LETIN 211 I Sbjct: 199 TNLIQ 203 >gi|226500762|ref|NP_001140242.1| hypothetical protein LOC100272283 [Zea mays] gi|194698666|gb|ACF83417.1| unknown [Zea mays] Length = 354 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 79/234 (33%), Positives = 101/234 (43%), Gaps = 55/234 (23%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 126 PRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKVND--------- 176 Query: 85 AMALVDMPGYG-----------------------------------------YARAPKKN 103 + LVD+PGYG YA AP++ Sbjct: 177 SWYLVDLPGYGPARPFLGEIEGESRALLLQILLEWIWQQSPTHGLSKKLVRIYASAPQEA 236 Query: 104 VDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +W Y R L V+LLID K+ID D S+L + V +V TK DK Sbjct: 237 RTNWDEFTRNYFLSRENLVSVFLLIDASIPAKKIDLDYASWLGQNKVPMTLVFTKCDKRK 296 Query: 164 PTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 +E +E + LIR Y A P I TSSV +G + + + + NY Sbjct: 297 KKKNGGRKPEENVETFQGLIREYFEAAPPWIMTSSVTNQGRDEILLHMSQLRNY 350 >gi|168308581|ref|ZP_02691256.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902437|gb|EDT48726.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 208 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 12/152 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P EI GRSNVGKSSLIN L N+K +ARTSN PGRTQ +NFF Sbjct: 4 FIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKK-IARTSNTPGRTQLVNFF-- 60 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 DF+N + LVD+PGYG+A+ K+ +I +YL R L V+ + D + Sbjct: 61 -DFNNFR-------LVDLPGYGFAKVSKEKQTDLAAIIDQYLGYRQNLCAVFQICDI-NV 111 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 + D ++ + + + ++ +VL K+DK++ + Sbjct: 112 LTNDDVEMSRYFENQKYAHFVVLNKLDKVNKS 143 >gi|154147982|ref|YP_001405909.1| GTP-binding protein [Campylobacter hominis ATCC BAA-381] gi|153803991|gb|ABS50998.1| GTP-binding protein [Campylobacter hominis ATCC BAA-381] Length = 210 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 18/173 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-- 71 FL EI + EIAF GRSNVGKSS IN +VN+KNLA++S PG+TQ +NFF Sbjct: 9 FLISASEISQINDFAKSEIAFLGRSNVGKSSFINAIVNQKNLAKSSAIPGKTQLINFFEV 68 Query: 72 ------VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + K+ N N ++ VD+PG+GYA+ KK W + ++ R+ ++ Sbjct: 69 NFKDEILSKNGENSAQNF-SLIFVDLPGFGYAKVSKKMHFIWQKNLDEFIKNRTGIKLFV 127 Query: 126 LLIDCRHGVKQIDQDVFSFL------DKKAVSYQIVLTKIDKLSPTTAQETLE 172 LID R +ID++ S++ D+ + + TK DKL+ L+ Sbjct: 128 HLIDSRQFDLEIDENADSYIRSFLRPDQALIKF---YTKSDKLNQKEKAAVLK 177 >gi|322379277|ref|ZP_08053663.1| GTPase EngB [Helicobacter suis HS1] gi|322379851|ref|ZP_08054139.1| GTPase EngB [Helicobacter suis HS5] gi|321147729|gb|EFX42341.1| GTPase EngB [Helicobacter suis HS5] gi|321148314|gb|EFX42828.1| GTPase EngB [Helicobacter suis HS1] Length = 232 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 6/168 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R + P A E+AF GRSNVGKS+ IN L+ K +A++S PG+T+ NFF Sbjct: 38 FVRSSTRLQDCPPANMAEVAFLGRSNVGKSTFINQLLECK-IAKSSTTPGKTKTANFFTT 96 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+ + VD+PG+GYA+ K WGG + L +R +++ LID RH Sbjct: 97 T--WQLEQEVVKFGCVDLPGFGYAKVSKSLKQEWGGFLYTLLKQRVSIKLFLHLIDSRHP 154 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 +ID + FL K V TK DKL+ KT +L+ Sbjct: 155 NLEIDAALQQFLKSVIKPDQQIMCVYTKFDKLNSHDQHALYYKTPHLL 202 >gi|13357826|ref|NP_078100.1| GTPase EngB [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|167971952|ref|ZP_02554229.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|168282428|ref|ZP_02690095.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|170762083|ref|YP_001752349.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|13124226|sp|Q9PQM5|ENGB_UREPA RecName: Full=Probable GTP-binding protein EngB gi|189037196|sp|B1AIQ5|ENGB_UREP2 RecName: Full=Probable GTP-binding protein EngB gi|11356756|pir||D82913 conserved hypothetical ATP/GTP-binding protein UU266 [imported] - Ureaplasma urealyticum gi|6899237|gb|AAF30675.1|AE002123_8 conserved hypothetical ATP/GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827660|gb|ACA32922.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675765|gb|EDT87670.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700634|gb|EDU18916.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 208 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 12/152 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P EI GRSNVGKSSLIN L N+K +ARTSN PGRTQ +NFF Sbjct: 4 FIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKK-IARTSNTPGRTQLVNFF-- 60 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 DF+N + LVD+PGYG+A+ K+ +I +YL R L V+ + D + Sbjct: 61 -DFNNFR-------LVDLPGYGFAKVSKEKQTDLAAIIDQYLGYRQNLCAVFQICDI-NV 111 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 + D ++ + + + ++ +VL K+DK++ + Sbjct: 112 LTNDDVEMSRYFENQKYAHFVVLNKLDKVNKS 143 >gi|320106882|ref|YP_004182472.1| ribosome biogenesis GTP-binding protein YsxC [Terriglobus saanensis SP1PR4] gi|319925403|gb|ADV82478.1| ribosome biogenesis GTP-binding protein YsxC [Terriglobus saanensis SP1PR4] Length = 204 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/182 (37%), Positives = 93/182 (51%), Gaps = 13/182 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSLIN L+ AR S+ PGRT+ +NFF D + P + Sbjct: 27 PEVAFLGRSNVGKSSLINALLGGTQ-ARVSSTPGRTRSINFFGLYDDPRPQ---PEVIFA 82 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K W G I YL++R TL L+D + D + ++L + Sbjct: 83 DLPGYGYAKISKSISAEWSGFIDPYLADRETLALCICLVDTNIPPQPPDTQLINYLREIR 142 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVLRKAIL 207 + +V TK DKLS T ++ K H EV+P S ++ I+ L IL Sbjct: 143 RPFLVVGTKSDKLSNNTLGNSVLALK-------KGHGVDEVMPCSVKDQRNIKHLWARIL 195 Query: 208 ET 209 T Sbjct: 196 AT 197 >gi|312622795|ref|YP_004024408.1| ribosome biogenesis GTP-binding protein ysxc [Caldicellulosiruptor kronotskyensis 2002] gi|312203262|gb|ADQ46589.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor kronotskyensis 2002] Length = 204 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 79/134 (58%), Gaps = 10/134 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ GRSNVGKSS IN + K LA+ + PG+T+ +NFF N+ N +V Sbjct: 26 PEMCICGRSNVGKSSFINAVFKDK-LAKVGSTPGKTRTINFF------NIDNKF---RVV 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K+ W +I YL ER L+ LL+D RH + D+ + SF DKK Sbjct: 76 DLPGYGYAKVSKEEKRRWKSMIEEYLLEREELKLSVLLLDSRHIPTEDDKIMLSFFDKKE 135 Query: 150 VSYQIVLTKIDKLS 163 + IVLTK DKLS Sbjct: 136 IPIMIVLTKCDKLS 149 >gi|39938503|ref|NP_950269.1| ribosome biogenesis GTP-binding protein YsxC [Onion yellows phytoplasma OY-M] gi|39721612|dbj|BAD04102.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M] Length = 196 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R + +P PEI GRSNVGKS+ IN L RK LA+ S PG+T LN++ Sbjct: 7 FVRSIVHFKDIPLKKQPEIVLMGRSNVGKSTFINALTQRKKLAKISQTPGKTITLNYY-- 64 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + + L+D PGYGYA+ K+ +I+ +L + S L+ V+ LID + G Sbjct: 65 -DINE------SFYLIDTPGYGYAKKSKEIQKQLLPMIISFLEQTSHLKAVFQLIDFKVG 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 Q D + L + ++ K DK+ + L K L+ ++P + SS Sbjct: 118 ATQEDDRIHQALLQAGFEVVLLFVKKDKVKKNLVPKQL---KMLVNHFPQIKYFFL-ISS 173 Query: 194 VKRKGIEVLR 203 +++G+E L+ Sbjct: 174 KQQEGLEELK 183 >gi|261749612|ref|YP_003257298.1| putative EngB GTP-binding protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497705|gb|ACX84155.1| putative EngB GTP-binding protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 206 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 9/171 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE AF GRSNVGKSSLIN + NR+ LA+ S+ PGRT+ +N F+ L+ Sbjct: 24 PEYAFIGRSNVGKSSLINWITNRRKLAKVSSTPGRTKFVNPFLINH---------KWYLI 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGY+ +K + L++ Y+ R L ++LLID R +++ D L Sbjct: 75 DLPGYGYSSICQKKKEKTQKLMMDYIFYRKNLVNLFLLIDSRIFLQKSDIHFIKKLKIFQ 134 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + IV TK DK+ P + ++ K I + P+ S R G E Sbjct: 135 IPFCIVFTKTDKIHPRFLNKNIDFCKKEIEKILFSMPKYFKVSIKNRSGRE 185 >gi|170105204|ref|XP_001883815.1| predicted protein [Laccaria bicolor S238N-H82] gi|164641450|gb|EDR05711.1| predicted protein [Laccaria bicolor S238N-H82] Length = 249 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 94/194 (48%), Gaps = 21/194 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G PE GR+N GKSSL N ++ R +L TS PG TQ LNF+ + + Sbjct: 65 GLPEEIIPGRANAGKSSLFNSVLGRTSLLHTSKKPGHTQQLNFY------RVGAEPGKLV 118 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD PGYG P+ WG + YL R LR VY+L + +HG+ D + S L Sbjct: 119 LVDAPGYGARGRPQ-----WGEMFDGYLRSRKELRRVYILFNAKHGLNGYDTQMLSHLST 173 Query: 148 KAVS--------YQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRK- 197 VS Q V+TKID + Q +LEK + I + P P ++ +S + Sbjct: 174 FLVSPSGTQPFTLQAVITKIDTVPVGKVQGSLEKMRKDIFAFAPLCLPPIVTSSLMSPPF 233 Query: 198 GIEVLRKAILETIN 211 GI+++R+ I E Sbjct: 234 GIDLVRRNIAEACG 247 >gi|302853147|ref|XP_002958090.1| hypothetical protein VOLCADRAFT_69046 [Volvox carteri f. nagariensis] gi|300256558|gb|EFJ40821.1| hypothetical protein VOLCADRAFT_69046 [Volvox carteri f. nagariensis] Length = 214 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 89/183 (48%), Gaps = 13/183 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PE A GRSNVGKSSLIN L LA+ S PG+ +N ++ Sbjct: 18 FIKSSTRVADCPPDKLPEFALIGRSNVGKSSLINSLTRNDKLAKVSKEPGKHHLINHYLI 77 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+A+A K + + W Y ER L V LL+D Sbjct: 78 ND---------SWYLVDLPGYGFAKAGKSSKEEWLKFTKDYFIERENLVSVLLLVDSSVP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKID---KLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +++D+D ++L + V + IV TKID + P AQ + K L+ P Sbjct: 129 PQEVDKDCANWLAECEVPFCIVFTKIDNRKRDMPPNAQ-NIRAFKQLMAEEWEELPRCFE 187 Query: 191 TSS 193 TSS Sbjct: 188 TSS 190 >gi|156368085|ref|XP_001627527.1| predicted protein [Nematostella vectensis] gi|156214439|gb|EDO35427.1| predicted protein [Nematostella vectensis] Length = 259 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 93/183 (50%), Gaps = 33/183 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEIA GR++VGKSSLIN L+N+K LARTS PG T+H+N F N +V Sbjct: 90 PEIALVGRTSVGKSSLINALLNQKKLARTSKRPGHTRHINLF---------NVGSRFHIV 140 Query: 90 DMPGYGYAR--APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D+PGYGY P + +W V Y L+ V LLID G+K D L++ Sbjct: 141 DLPGYGYVERVGPVREFQNW----VCY-----RLKSVCLLIDGEVGIKINDLVAIEMLEE 191 Query: 148 KAVSYQIVLTKIDKLS-------PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++IVLTK+DK+S + Q+ ++K + +P V P S + G+ Sbjct: 192 FNTPFEIVLTKMDKVSKDSWMLVASNIQQRVDKLSNI------CYPHVFPISVKDKTGLS 245 Query: 201 VLR 203 LR Sbjct: 246 ELR 248 >gi|188996268|ref|YP_001930519.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931335|gb|ACD65965.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 197 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 13/162 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEIA GRSNVGKSSLIN + R ++A+ S PG+T+ +NFF+ D Sbjct: 19 FPPPDKPEIAIVGRSNVGKSSLINAIFKR-SIAKVSATPGKTKLINFFLLND-------- 69 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD+PGYG+A K +W +I YL R L + +L+D R+ +D + Sbjct: 70 -DIYFVDLPGYGFAAVSHKEKQNWKRMIEDYLLNRENLNLIIMLVDTRYPPTNLDILMKE 128 Query: 144 FLDKKAVSYQIVLTKIDKLSPTT---AQETLEKTKYLIRNYP 182 +L+ Y +V TKIDKL+ + A++ + +T L ++ P Sbjct: 129 WLESFEKPYIVVGTKIDKLNQSEKAKAEKVIRETLDLSKDVP 170 >gi|226530446|ref|NP_001151819.1| GTP-binding protein [Zea mays] gi|194700920|gb|ACF84544.1| unknown [Zea mays] gi|195649961|gb|ACG44448.1| GTP-binding protein [Zea mays] Length = 308 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 88/187 (47%), Gaps = 14/187 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE A GRSNVGKSSLIN L RK A TS PG+TQ +N F L N + LV Sbjct: 126 PEFAVLGRSNVGKSSLINALTRRKEAALTSKKPGKTQTINHF-------LVNK--SWYLV 176 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A A + W Y R TL V LLID ++ID D ++L + Sbjct: 177 DLPGYGFAAASQSARMDWSSFTKGYFLNRDTLVGVLLLIDASIPPQKIDLDCANWLGRNN 236 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN----YPTAHPEVIPTSSVKRKGIEVLRKA 205 + V TK DK+ E K YP P ++ TSSV G + L Sbjct: 237 IGLTFVFTKCDKVKKGKGGRPDENIKEFHETISGLYPDPPPWIM-TSSVTGLGRDGLLLH 295 Query: 206 ILETINY 212 + + NY Sbjct: 296 MSQLRNY 302 >gi|283954068|ref|ZP_06371593.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 414] gi|283794347|gb|EFC33091.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 414] Length = 198 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 100/185 (54%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP-AMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF + + KN + Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFF---EVTCKKNEEKFNINF 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKFRTSIKLFIHLIDSRHTHLEIDMNLNDYLKNF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EKTK + + S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKTK-----LKNEFKDFLLVSNLSKFGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|326912924|ref|XP_003202794.1| PREDICTED: GTP-binding protein 8-like [Meleagris gallopavo] Length = 220 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 93/177 (52%), Gaps = 19/177 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMA 87 ++ F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 43 QVCFVGRSNVGKSSLIRALFSLAPEVEVRVSKTPGHTKKMNFFNVGKYFT---------- 92 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVDMPGYGY APK VD ++ YL ER L+ +LL+D G++ D L++ Sbjct: 93 LVDMPGYGY-NAPKDFVD----MVEAYLQERHNLKRTFLLVDAVVGIQSTDLIAVEMLEE 147 Query: 148 KAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + Y +VLTKID+ S + L K++ P++ SSV+ G+ +LR Sbjct: 148 FGIPYVMVLTKIDRASKGLLLKNVLGIQKFVKEKTQGCFPQLFLVSSVEFSGVHLLR 204 >gi|146296520|ref|YP_001180291.1| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410096|gb|ABP67100.1| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 204 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/134 (44%), Positives = 78/134 (58%), Gaps = 10/134 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ GRSNVGKSS IN + K LA+ + PG+T+ +NFF N+ N +V Sbjct: 26 PEMCICGRSNVGKSSFINTIFKDK-LAKVGSTPGKTRTINFF------NIDNKF---RVV 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYGYA+ K+ W +I YL ER L+ LL+D RH + D+ + F DKK Sbjct: 76 DLPGYGYAQVSKEEKKRWKDMIEEYLLEREELKLAVLLLDSRHLPTEDDKIMLGFFDKKE 135 Query: 150 VSYQIVLTKIDKLS 163 + IVLTK DKLS Sbjct: 136 IPIMIVLTKCDKLS 149 >gi|121700180|ref|XP_001268355.1| GTP binding protein (EngB), putative [Aspergillus clavatus NRRL 1] gi|119396497|gb|EAW06929.1| GTP binding protein (EngB), putative [Aspergillus clavatus NRRL 1] Length = 321 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 82/133 (61%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ +N F K + L+ Sbjct: 97 PEVAFLGRSNVGKSSLLNAIMG-KEICWTSSKPGRTREMNAF---GIGGTKGGESKIVLL 152 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG K + WG I++YL R LR ++LID HG+K+ D+D+ + A Sbjct: 153 DMPGYG-----KASRAEWGIEILKYLQGRRQLRRAFVLIDSLHGIKKKDKDILKLFRQYA 207 Query: 150 VSYQIVLTKIDKL 162 + +QI+L+K+DK+ Sbjct: 208 IPHQIILSKVDKV 220 >gi|302686154|ref|XP_003032757.1| hypothetical protein SCHCODRAFT_53778 [Schizophyllum commune H4-8] gi|300106451|gb|EFI97854.1| hypothetical protein SCHCODRAFT_53778 [Schizophyllum commune H4-8] Length = 242 Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 24/210 (11%) Query: 14 FLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF- 71 F+ I +PK G PE+ GR+N GKSSL N +V RK+L TS+ PGRT+ LNF+ Sbjct: 44 FVAAAGSISNIPKLEGRPEVRSVGRANSGKSSLFNAVVGRKDLLHTSSKPGRTKELNFYS 103 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 V D +L LVD PGYG P+ WG L Y+S R LR +Y+L + + Sbjct: 104 VGADPGHL-------VLVDAPGYGARGRPE-----WGELFDHYISTRKQLRRIYILFNAK 151 Query: 132 HGVKQIDQDVFSFLDKKAV--------SYQIVLTKIDKLSPTTAQETLEKTKY-LIRNYP 182 H + D + + L K + + Q ++TK+D + ET+ K + + + P Sbjct: 152 HDLNDYDLGMLANLSDKLINAEGRQPFTLQAIITKVDSIPSGKEGETIRKLRQDIFKAAP 211 Query: 183 TAHPEVIPTSSVKRK-GIEVLRKAILETIN 211 P ++ + ++ G+ +R I++ + Sbjct: 212 LCMPPLLTSVTMHPPFGVGTVRSNIIDACS 241 >gi|291277358|ref|YP_003517130.1| GTP-binding protein Engb [Helicobacter mustelae 12198] gi|290964552|emb|CBG40405.1| probable GTP-binding protein Engb [Helicobacter mustelae 12198] Length = 205 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 5/154 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P EIAF GRSNVGKS+ IN++ N LA+ S+ PG+TQ +NFF+ Sbjct: 9 FLTSAKKLQDCPPEDLAEIAFLGRSNVGKSTFINLMANHAKLAKCSSTPGKTQLINFFLM 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + VD+PG+GYA+ K W + +L RS+++ LID RH Sbjct: 69 R--CEHEGREFFFRFVDLPGFGYAKVCKDLKREWEKNLWDFLQYRSSIKLFLHLIDGRHV 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSP 164 ID+ V L+++ Q VL TK DKL+ Sbjct: 127 DLPIDESVSQILEQRCRGDQSVLKIYTKCDKLNA 160 >gi|323342870|ref|ZP_08083102.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463982|gb|EFY09176.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelothrix rhusiopathiae ATCC 19414] Length = 191 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 10/140 (7%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P+ G EI G+SNVGKSSLIN + NRK LA PG+T+ +NF+ + Sbjct: 20 FPETGQKEIVMVGKSNVGKSSLINAITNRKKLAYVGQTPGKTRLINFYHINE-------- 71 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + L D+PGYG+A K+ +G L+ Y R + +L+D R GV Q D + Sbjct: 72 -EVILTDVPGYGFANRSKQEQIHYGTLMDSYFELRHP-SVMLVLVDVRRGVSQDDLMMIQ 129 Query: 144 FLDKKAVSYQIVLTKIDKLS 163 F + Y +VL+K+DKLS Sbjct: 130 FAIHYGIRYALVLSKVDKLS 149 >gi|47459175|ref|YP_016037.1| GTPase EngB [Mycoplasma mobile 163K] gi|81614262|sp|Q6KHV1|ENGB_MYCMO RecName: Full=Probable GTP-binding protein EngB gi|47458504|gb|AAT27826.1| GTP-binding protein [Mycoplasma mobile 163K] Length = 181 Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 52/135 (38%), Positives = 77/135 (57%), Gaps = 10/135 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F GRSNVGKSSLIN L + + + PG+T+ +NFF + ++VD Sbjct: 21 EICFVGRSNVGKSSLINALF-KTRVVKVGKTPGKTKLINFF---------EDERGNSVVD 70 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ K+ +I +L++R ++ ++LLID R G IDQ+ + FL + Sbjct: 71 LPGYGYAKLSKEAQSEISDMIFEFLTKRVEIKKLFLLIDSRLGFTPIDQEFYDFLKEAPF 130 Query: 151 SYQIVLTKIDKLSPT 165 IV TK DKL+ + Sbjct: 131 EIIIVATKRDKLNQS 145 >gi|42522382|ref|NP_967762.1| GTP-binding protein [Bdellovibrio bacteriovorus HD100] gi|81829281|sp|Q6MPP2|ENGB_BDEBA RecName: Full=Probable GTP-binding protein EngB gi|39574914|emb|CAE78755.1| GTP-binding protein [Bdellovibrio bacteriovorus HD100] Length = 200 Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 15/185 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P E+A +GRSN GKSS IN L K +A+ S+ PG+T+ LNFF Sbjct: 26 FPVHKKAEVAIAGRSNAGKSSFINALTKNK-IAKVSSTPGKTRLLNFFELDQ-------- 76 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + +VDMPGYG+A + W +I YL R LR + L++D R + ++ + Sbjct: 77 -SYVMVDMPGYGFAARSGDEMREWHRMIETYLMNREQLRGLLLVMDIRRSWTEDEELLKE 135 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 F +++ +VLTK DK+S + + + K K + V S++K++G + + Sbjct: 136 FSERRGFPLAVVLTKADKMSRSQMLQAVAKVK-----KASGLSAVFGVSALKKEGQDAVE 190 Query: 204 KAILE 208 I E Sbjct: 191 DYIYE 195 >gi|212534274|ref|XP_002147293.1| GTP binding protein (EngB), putative [Penicillium marneffei ATCC 18224] gi|210069692|gb|EEA23782.1| GTP binding protein (EngB), putative [Penicillium marneffei ATCC 18224] Length = 338 Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 80/133 (60%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF G++NVGKSSLIN LV+ + R+ + G+T +N + K + L+ Sbjct: 107 PEVAFLGKTNVGKSSLINALVD-DEICRSGDKRGKTTEMNAY---GIGGTKGGESKIVLL 162 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYG ++ G I++YL +R LR ++LID HG+K DQ + + L + A Sbjct: 163 DMPGYGAGSKLEQ-----GEEIMKYLQKRKQLRRTFILIDLIHGIKSHDQQILTLLRQYA 217 Query: 150 VSYQIVLTKIDKL 162 + +Q+V++K+D++ Sbjct: 218 IPHQLVVSKVDRV 230 >gi|294947742|ref|XP_002785471.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239899382|gb|EER17267.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 319 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 24/208 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL-NFFVPKDFSNLKNNLPAM 86 G P +AF GRSN GKSSL+N L+ + +AR S PGRT+ L F + +D + + Sbjct: 94 GVPTVAFCGRSNAGKSSLVNGLLFGRQVARASKTPGRTRQLFTFDLGRDEHIREGKGRPL 153 Query: 87 ALVDMPGYGYARAPKKNVDS-WGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF- 144 +VD+PG G+A+ + + W L+ Y+ LR V LID GVK D+ ++ Sbjct: 154 RIVDLPGLGFAKGIDADQKAEWRALVGEYMERADNLRLVVSLIDVIEGVKSTDEYLWKLT 213 Query: 145 ---LDKKAVSYQ-------------IVLTKIDKLSPTTAQET----LEKTKYLIRNYP-T 183 ++ +++ + +VLTK+D++ PTT E L + +Y + Y T Sbjct: 214 VRSMENRSIMEEGPPPPRNIKSRLMVVLTKVDRVLPTTLHEEVASILSRIEYWQKEYDLT 273 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETIN 211 P V S+ G+ LR A++E ++ Sbjct: 274 FWPYVHCVSAQDGHGMSELRAALVEAMD 301 >gi|228923222|ref|ZP_04086512.1| GTP-binding protein YihA [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836428|gb|EEM81779.1| GTP-binding protein YihA [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 165 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 9/136 (6%) Query: 40 VGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA 99 +GKSS IN ++NRK L R S+ PG+TQ LNFF+ + M VD+PGYGYA+ Sbjct: 1 MGKSSFINKILNRKKLVRISSKPGKTQTLNFFLINEM---------MHFVDVPGYGYAKV 51 Query: 100 PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKI 159 K +WG +I Y + R L L++D RH D ++ FL + I+ TK Sbjct: 52 SKSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTSDDVMMYDFLKHYEIPTIIIATKA 111 Query: 160 DKLSPTTAQETLEKTK 175 DK+ Q+ L+ K Sbjct: 112 DKIPKGKWQKHLKVVK 127 >gi|228954752|ref|ZP_04116774.1| GTP-binding protein YihA [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960745|ref|ZP_04122384.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048186|ref|ZP_04193755.1| GTP-binding protein YihA [Bacillus cereus AH676] gi|229071978|ref|ZP_04205188.1| GTP-binding protein YihA [Bacillus cereus F65185] gi|229081735|ref|ZP_04214228.1| GTP-binding protein YihA [Bacillus cereus Rock4-2] gi|229111940|ref|ZP_04241484.1| GTP-binding protein YihA [Bacillus cereus Rock1-15] gi|229129761|ref|ZP_04258728.1| GTP-binding protein YihA [Bacillus cereus BDRD-Cer4] gi|229147039|ref|ZP_04275399.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST24] gi|229152671|ref|ZP_04280859.1| GTP-binding protein YihA [Bacillus cereus m1550] gi|229180745|ref|ZP_04308083.1| GTP-binding protein YihA [Bacillus cereus 172560W] gi|229192681|ref|ZP_04319640.1| GTP-binding protein YihA [Bacillus cereus ATCC 10876] gi|228590771|gb|EEK48631.1| GTP-binding protein YihA [Bacillus cereus ATCC 10876] gi|228602723|gb|EEK60206.1| GTP-binding protein YihA [Bacillus cereus 172560W] gi|228630817|gb|EEK87458.1| GTP-binding protein YihA [Bacillus cereus m1550] gi|228636427|gb|EEK92897.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST24] gi|228653677|gb|EEL09548.1| GTP-binding protein YihA [Bacillus cereus BDRD-Cer4] gi|228671504|gb|EEL26804.1| GTP-binding protein YihA [Bacillus cereus Rock1-15] gi|228701580|gb|EEL54073.1| GTP-binding protein YihA [Bacillus cereus Rock4-2] gi|228711137|gb|EEL63102.1| GTP-binding protein YihA [Bacillus cereus F65185] gi|228723173|gb|EEL74549.1| GTP-binding protein YihA [Bacillus cereus AH676] gi|228798961|gb|EEM45936.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804950|gb|EEM51547.1| GTP-binding protein YihA [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 165 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 9/136 (6%) Query: 40 VGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA 99 +GKSS IN ++NRK L R S+ PG+TQ LNFF+ + M VD+PGYGYA+ Sbjct: 1 MGKSSFINKILNRKKLVRISSKPGKTQTLNFFLINEM---------MHFVDVPGYGYAKV 51 Query: 100 PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKI 159 K +WG +I Y + R L L++D RH D ++ FL + I+ TK Sbjct: 52 SKSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTSDDVMMYDFLKHYEIPTIIIATKA 111 Query: 160 DKLSPTTAQETLEKTK 175 DK+ Q+ L+ K Sbjct: 112 DKIPKGKWQKHLKVVK 127 >gi|193216921|ref|YP_002000163.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma arthritidis 158L3-1] gi|238692481|sp|B3PN57|ENGB_MYCA5 RecName: Full=Probable GTP-binding protein EngB gi|193002244|gb|ACF07459.1| GTPase protein YihA (EngB) [Mycoplasma arthritidis 158L3-1] Length = 183 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 10/154 (6%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F++ + + EI F GRSNVGKSSLIN L ++K +A+TS+ PGRT+ +N+F Sbjct: 2 WKFIKSATDQNNWLEHDQNEIVFWGRSNVGKSSLINALASQK-IAKTSSTPGRTRLINYF 60 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + +VD+PGYG+A KK G+I Y + + +LID + Sbjct: 61 ETQ---------RKKIIVDLPGYGFASMSKKAQSKISGIIDFYFRNSKNSKNICILIDAK 111 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 G ID ++ +L + + I++TKIDK + + Sbjct: 112 IGFSYIDLEMIDYLKSLGLLFDIIITKIDKANQS 145 >gi|32266828|ref|NP_860860.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter hepaticus ATCC 51449] gi|81665602|sp|Q7VGJ2|ENGB_HELHP RecName: Full=Probable GTP-binding protein EngB gi|32262880|gb|AAP77926.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 222 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 7/170 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P EI F GRSNVGKS+LIN L+N K LA++S+ PG+TQ +NFF Sbjct: 9 FMSSASHLDNAPPPNASEIVFLGRSNVGKSTLINTLLN-KPLAKSSSTPGKTQLINFFAS 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N + +D+PG+GYA+ K W ++ +L R +++ L+D RH Sbjct: 68 --VWVWHNQRLPLTFIDLPGFGYAKVSKTIKKEWERHLLNFLFMRQSIKLFLHLVDARHT 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRN 180 ID V + L++ Q +L TK DKL+ +A L K Y+ +N Sbjct: 126 DLAIDTSVATMLEQICRGDQCILRIYTKADKLNQ-SALNALYKRVYIQKN 174 >gi|167973106|ref|ZP_02555383.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|167974818|ref|ZP_02557095.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|167976019|ref|ZP_02558296.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|167988518|ref|ZP_02570189.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|168361987|ref|ZP_02695166.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195867678|ref|ZP_03079680.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273611|ref|ZP_03206146.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554309|ref|YP_002284666.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550577|ref|ZP_03771526.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551103|ref|ZP_03772049.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|238058989|sp|B5ZB76|ENGB_UREU1 RecName: Full=Probable GTP-binding protein EngB gi|171903533|gb|EDT49822.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209057|gb|EDU06100.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018849|gb|EDU56889.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997724|gb|EDU66821.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659574|gb|EDX52954.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660735|gb|EDX53990.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249639|gb|EDY74420.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541810|gb|ACI60039.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378918|gb|EEH01283.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379731|gb|EEH02093.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 208 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 21/201 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P EI GRSNVGKSSLIN L N K +ARTSN PGRTQ +NFF Sbjct: 4 FIKSAQYFDQYPVDKQFEICVIGRSNVGKSSLINALANEK-IARTSNTPGRTQLVNFF-- 60 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 DF++ + LVD+PGYG+AR K +I +YL R L V+ + D + Sbjct: 61 -DFNSFR-------LVDLPGYGFARVSKDKQLDLATIIDQYLGYRQNLCAVFQICDI-NV 111 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 + D ++ + + + ++ +VL K+DK++ + +K K+L + ++ S Sbjct: 112 LTNDDVEMSRYFENQNYAHFVVLNKVDKVNKSHFDNNKQKIAKFL----NISVDRLLCVS 167 Query: 193 SVKRKGIEVL----RKAILET 209 + K + L +K ++ET Sbjct: 168 AQKNTNVATLFALMKKVVIET 188 >gi|298705654|emb|CBJ28902.1| YihA3, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 420 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 11/139 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVN---RKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 PE+A +G +N GKS+L+N L R+ A TS+ G T + F+ + P + Sbjct: 199 PEVALAGHTNCGKSTLVNALSGIHPRRGPASTSDRAGWTDLVGFY------QVGKKPPVL 252 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-RCVYLLIDCRHGVKQIDQDVFSFL 145 +VD+PGYG+A A + + W +I Y++ R L RC +L+DC G + D+ + L Sbjct: 253 TMVDLPGYGHAVATRHAIKGWLRMIKEYITTRQELIRCC-VLVDCTRGFCEEDRALLQLL 311 Query: 146 DKKAVSYQIVLTKIDKLSP 164 K+ + YQIVLTK D L+P Sbjct: 312 AKRNIPYQIVLTKADLLTP 330 >gi|255020065|ref|ZP_05292137.1| GTP-binding protein EngB [Acidithiobacillus caldus ATCC 51756] gi|254970492|gb|EET27982.1| GTP-binding protein EngB [Acidithiobacillus caldus ATCC 51756] Length = 247 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 83/162 (51%), Gaps = 9/162 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP E+A +GRSNVGKSS++N+L LAR S PGRTQ +N F Sbjct: 23 FSTSVTRMDQLPADDGAEVAIAGRSNVGKSSVLNLLTGHGGLARVSRTPGRTQAINVF-- 80 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D P L+D+PGYGYA+ P SWG L+ YL R++LR + L++D RH Sbjct: 81 -DLD------PGQRLMDLPGYGYAKVPDALRLSWGDLLEDYLRRRTSLRLLLLVMDIRHP 133 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + D + F +L K DKLS A L + + Sbjct: 134 LGSHDLALLDFARHCGRPVHALLNKADKLSRGAALHALAQAR 175 >gi|269792561|ref|YP_003317465.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100196|gb|ACZ19183.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 201 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 11/144 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 PE+ GRSNVGKSSLIN ++ ++ LA+ S PG+T+ +NFF V D P L Sbjct: 23 PEVVMVGRSNVGKSSLINAMIGQR-LAKVSKTPGKTRSVNFFEVQGD--------PPFVL 73 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYG+A ++ W LI RY S + V L+D RHG + D+ + +L Sbjct: 74 VDLPGYGFAARSGGELELWRRLIERYFRS-SRVSLVLQLVDFRHGFLKNDRQMEEYLAGL 132 Query: 149 AVSYQIVLTKIDKLSPTTAQETLE 172 + +V TK+DK+S + + L+ Sbjct: 133 QIPVGVVFTKLDKVSGSRRKSALD 156 >gi|109948148|ref|YP_665376.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter acinonychis str. Sheeba] gi|122973208|sp|Q17VE9|ENGB_HELAH RecName: Full=Probable GTP-binding protein EngB gi|109715369|emb|CAK00377.1| conserved hypothetical GTP-binding protein [Helicobacter acinonychis str. Sheeba] Length = 208 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 105/204 (51%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P + E+ GRSNVGKSS IN L+ KNLA++S+ PG+T+ NFF Sbjct: 9 FITSSSQLSQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSSTPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + KN L +++D+PG+GYA+ K W G + LS R++++ LID RH Sbjct: 67 TTWEDKKNALTTTFSVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLIDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LNLEIDKNAKENIQTLLRSDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|326433254|gb|EGD78824.1| GTPase EngB [Salpingoeca sp. ATCC 50818] Length = 249 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 23/203 (11%) Query: 14 FLRGVPEIGLLP--KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 FL P++ +P E+ G SNVGKS+L+N L+ K LA TS PG T+ LNFF Sbjct: 55 FLTSAPKLNAVPPLAVDQAEVVLMGASNVGKSTLLNALLGTK-LAYTSKTPGHTKMLNFF 113 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + + +VD+PGYG+ + L+ Y R C LLID + Sbjct: 114 QGQRH---------LRVVDVPGYGFGSHQHQMT-----LLGDYFHNRQGHACACLLIDAK 159 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL---EKTKYLIRNY--PTAHP 186 G+K +D FS L + + Y+++LTK D+L +E + E+T L P P Sbjct: 160 KGIKDLDLAAFSLLLEHFIPYRVLLTKADRLPVGPLRERILECEQTLTLSAQEFNPATSP 219 Query: 187 EVI-PTSSVKRKGIEVLRKAILE 208 ++ P S+ +RKG++ +R +I E Sbjct: 220 VLVQPVSAKQRKGLDQVRASICE 242 >gi|157414929|ref|YP_001482185.1| GTPase EngB [Campylobacter jejuni subsp. jejuni 81116] gi|172047094|sp|A8FL71|ENGB_CAMJ8 RecName: Full=Probable GTP-binding protein EngB gi|157385893|gb|ABV52208.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747567|gb|ADN90837.1| Probable GTP-binding protein engB [Campylobacter jejuni subsp. jejuni M1] gi|315931848|gb|EFV10803.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 198 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 24/186 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVTCKRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKAK-----LKNEFKDSILVSNLNKFGLDSL 185 Query: 203 RKAILE 208 I++ Sbjct: 186 EDIIID 191 >gi|27904864|ref|NP_777990.1| putative GTP-binding protein EngB [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|27904262|gb|AAO27095.1| putative GTP-binding protein EngB [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 236 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S W FL+ + I E+AF G SN GKSS+IN L N+K LA+ S PGRT+ +N Sbjct: 39 STW-FLKSIANIQKEKYNYGLEVAFVGYSNSGKSSIINALTNQKKLAKISRTPGRTRLIN 97 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD PGYGYA+ + W +I +YL+ + L+ + ++ D Sbjct: 98 IFSVT---------SEIRLVDFPGYGYAQVSRSISKKWKEMIFQYLNIQKCLQGLVIITD 148 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R +K+ID+ V + + ++L K+DK++ + + L T+ + N+ + V Sbjct: 149 IRCPIKEIDELVINLAVSLNIPILLLLNKMDKVTRSIQKSKLFSTREKMLNFSN-NINVE 207 Query: 190 PTSSVKRKGIEVLR 203 SS K+ GI L+ Sbjct: 208 LFSSFKKIGIHKLQ 221 >gi|31076686|sp|Q89AD0|ENGB_BUCBP RecName: Full=Probable GTP-binding protein EngB Length = 228 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S W FL+ + I E+AF G SN GKSS+IN L N+K LA+ S PGRT+ +N Sbjct: 31 STW-FLKSIANIQKEKYNYGLEVAFVGYSNSGKSSIINALTNQKKLAKISRTPGRTRLIN 89 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD PGYGYA+ + W +I +YL+ + L+ + ++ D Sbjct: 90 IFSVT---------SEIRLVDFPGYGYAQVSRSISKKWKEMIFQYLNIQKCLQGLVIITD 140 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R +K+ID+ V + + ++L K+DK++ + + L T+ + N+ + V Sbjct: 141 IRCPIKEIDELVINLAVSLNIPILLLLNKMDKVTRSIQKSKLFSTREKMLNFSN-NINVE 199 Query: 190 PTSSVKRKGIEVLR 203 SS K+ GI L+ Sbjct: 200 LFSSFKKIGIHKLQ 213 >gi|194246503|ref|YP_002004142.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Phytoplasma mali] gi|193806860|emb|CAP18289.1| conserved hypothetical protein [Candidatus Phytoplasma mali] Length = 196 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 10/199 (5%) Query: 13 IFLRGVPEI-GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 IF++ + +I PEI G+SNVGKSS IN L +K LAR S PG+T LN++ Sbjct: 6 IFIKSIAQIKDTFSLIKHPEIILIGKSNVGKSSFINNLTGQKKLARVSKNPGKTITLNYY 65 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + +F L+D PGYGYAR K+ ++ +I L R + LID + Sbjct: 66 LLNNF---------FYLIDTPGYGYARISKQIKKNFLIIIFDLLKNNLNYRKILYLIDFK 116 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G D ++ FL K +V TK DK++ T Q+ L K + N+ + Sbjct: 117 VGPNANDINICGFLIKNGFEIVLVFTKKDKINKTKIQQQLIKIQNNFNNFNISCDNFFLI 176 Query: 192 SSVKRKGIEVLRKAILETI 210 S+ ++GI + IL+ + Sbjct: 177 SNKNKEGIVEITNFILKNV 195 >gi|116515192|ref|YP_802821.1| EngB [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116257046|gb|ABJ90728.1| putative GTPase, involved in coordination of cell cycle, engB family [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 202 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 12/194 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-V 72 F+ + L E+AF G SNVGKS++IN L +AR S PGRT+ +NFF V Sbjct: 11 FITSIINYSNLGTFSGIEVAFLGYSNVGKSTMINCLSGNNKIARISKLPGRTKTINFFHV 70 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 DF +VD PGYGY++ + + YL R L+ + LL D R Sbjct: 71 LSDF----------RIVDFPGYGYSKINYLDKKLLEKSLFFYLKNRECLKGIVLLSDIRF 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +K D+ + FL K+ + I+LTK DK+S ++ +E KY ++ + + S Sbjct: 121 FLKSFDEFILQFLKKRNLFVLIILTKSDKISK-REKKKIELLKYNKISHLHMNITICSFS 179 Query: 193 SVKRKGIEVLRKAI 206 + I+ +RK + Sbjct: 180 KFYKNNIQFIRKIL 193 >gi|224436945|ref|ZP_03657926.1| GTPase EngB [Helicobacter cinaedi CCUG 18818] Length = 234 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 81/138 (58%), Gaps = 12/138 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL---KNNLPAMA 87 EI F GRSNVGKSSLIN L+N LA++S+ PG+TQ +NFF S+L +N + Sbjct: 46 EIVFLGRSNVGKSSLINALLNAP-LAKSSSTPGKTQLINFF-----SSLWLKENQKIPLC 99 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 VD+PG+GYA+ K W ++ +L R +++ L+D RH +ID+ V +FL + Sbjct: 100 FVDLPGFGYAKVSKSIKKEWEKNLLSFLLSRQSIKLFLHLVDSRHTDLEIDKSVEAFLQE 159 Query: 148 KAVSYQIVL---TKIDKL 162 Q +L TK DKL Sbjct: 160 ICKGDQKILRIYTKADKL 177 >gi|315124164|ref|YP_004066168.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017886|gb|ADT65979.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 198 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVACKRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LQPDQKILK---VFTKCDKLNQS------EKAK-----LKNEFKDSILVSNLNKFGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|148926634|ref|ZP_01810315.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845153|gb|EDK22248.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 198 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVACKRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKAK-----LKNEFKDSILVSNLNKFGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|205355500|ref|ZP_03222271.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346734|gb|EDZ33366.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 198 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVACKRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKAK-----LKNEFKDSILVSNLNKFGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|313143417|ref|ZP_07805610.1| GTPase EngB [Helicobacter cinaedi CCUG 18818] gi|313128448|gb|EFR46065.1| GTPase EngB [Helicobacter cinaedi CCUG 18818] Length = 205 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/138 (41%), Positives = 81/138 (58%), Gaps = 12/138 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL---KNNLPAMA 87 EI F GRSNVGKSSLIN L+N LA++S+ PG+TQ +NFF S+L +N + Sbjct: 17 EIVFLGRSNVGKSSLINALLNAP-LAKSSSTPGKTQLINFF-----SSLWLKENQKIPLC 70 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 VD+PG+GYA+ K W ++ +L R +++ L+D RH +ID+ V +FL + Sbjct: 71 FVDLPGFGYAKVSKSIKKEWEKNLLSFLLSRQSIKLFLHLVDSRHTDLEIDKSVEAFLQE 130 Query: 148 KAVSYQIVL---TKIDKL 162 Q +L TK DKL Sbjct: 131 ICKGDQKILRIYTKADKL 148 >gi|284925910|gb|ADC28262.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter jejuni subsp. jejuni IA3902] Length = 198 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVTCKRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKAK-----LKNEFKDSILVSNLNKFGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|121612815|ref|YP_001000351.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter jejuni subsp. jejuni 81-176] gi|167005296|ref|ZP_02271054.1| GTPase EngB [Campylobacter jejuni subsp. jejuni 81-176] gi|166225949|sp|A1VZ10|ENGB_CAMJJ RecName: Full=Probable GTP-binding protein EngB gi|87250438|gb|EAQ73396.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 198 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVTCKRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKAK-----LKNEFKDSILVSNLNKFGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|145541630|ref|XP_001456503.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|74831141|emb|CAI39251.1| rab_C101 [Paramecium tetraurelia] gi|124424315|emb|CAK89106.1| unnamed protein product [Paramecium tetraurelia] Length = 308 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 21/187 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P E+ F GRSNVGKSSLIN ++ +K +A TS+ G T L F + + + Sbjct: 75 PKEVLFVGRSNVGKSSLINAILGQK-VAETSSRTGSTLRLQFHNIQTINGF--------V 125 Query: 89 VDMPGYGYARAPKKNVDS---WGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD PGYGY++ NVD+ G+I Y S L +Y+LID HG+K D+ + + L Sbjct: 126 VDSPGYGYSQI---NVDAQKYMQGMIYTYTKLASRLSRIYVLIDIEHGLKDKDRVMLNML 182 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL---IRNYPTAHPEVIPTSSVKRKGIEVL 202 ++ V+ QIVLTK DK+ ++ YL I+ + HP + S+ GI + Sbjct: 183 QEQNVNIQIVLTKCDKVKERML---FDRQLYLAREIKQFKNIHPIIHTVSTKDNFGINDI 239 Query: 203 RKAILET 209 + +++++ Sbjct: 240 QYSLIDS 246 >gi|240047222|ref|YP_002960610.1| putative GTP-binding protein engB [Mycoplasma conjunctivae HRC/581] gi|239984794|emb|CAT04770.1| Probable GTP-binding protein engB [Mycoplasma conjunctivae] Length = 183 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 21/185 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 +IAF GRSNVGKSSLIN L +K +A+ S PGRTQ +N+F KN + + Sbjct: 18 EEQIAFIGRSNVGKSSLINALAKQK-IAKVSKHPGRTQLINYFKTD-----KNKI----V 67 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYA+ ++ ++ E + L+ V+L+ID G +D + +L Sbjct: 68 VDLPGYGYAKISISQKMEISQMVNQFFQENNKLKAVFLIIDAFVGFTNLDLQMLDYLKDL 127 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIR--NYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V KIDK T Q K +I NY EVI TSS K+ G++ + I Sbjct: 128 NIETILVANKIDK----TNQSQRSKITNIINKMNY-----EVILTSSKKQTGLDKIDLKI 178 Query: 207 LETIN 211 + +N Sbjct: 179 NQILN 183 >gi|145536053|ref|XP_001453754.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|74833765|emb|CAI39351.1| rab_C86 [Paramecium tetraurelia] gi|124421487|emb|CAK86357.1| unnamed protein product [Paramecium tetraurelia] Length = 308 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 15/184 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P E+ F GRSNVGKSSLIN ++ +K +A TS+ G T L F + + + Sbjct: 75 PKEVLFVGRSNVGKSSLINAILGQK-VAETSSKTGSTLRLQFHNIQTINGF--------V 125 Query: 89 VDMPGYGYARAPKKNVDS---WGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD PGYGY++ NVD+ G++ Y S L +Y+LID HG+K D+ + + L Sbjct: 126 VDSPGYGYSQI---NVDAQKYMQGMMYTYTKLSSRLARIYVLIDIEHGIKDKDKVMLNML 182 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ V+ QIVLTK DK+ + I+ + HP + S+ GI ++ + Sbjct: 183 QEQNVNIQIVLTKCDKIKERMLYDRQLYLAREIKQFKNIHPIIHTVSTKDNFGINDIQYS 242 Query: 206 ILET 209 ++++ Sbjct: 243 LIDS 246 >gi|86151859|ref|ZP_01070073.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85841488|gb|EAQ58736.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 260.94] Length = 198 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVTCKRNKEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKAK-----LKNEFKDSILVSNLNKFGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|256384099|gb|ACU78669.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides subsp. capri str. GM12] gi|256384931|gb|ACU79500.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides subsp. capri str. GM12] gi|296455974|gb|ADH22209.1| ribosome biogenesis GTP-binding protein YsxC [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 196 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/136 (39%), Positives = 71/136 (52%), Gaps = 8/136 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 EI GRSNVGKSS IN L N LA+ SN PG+T+ LNFF + N LV Sbjct: 23 SEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLLNFF--------EINKGEYRLV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PGYGYA+ + ++ Y R L+ V+LL+D RH D ++ FL Sbjct: 75 DAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSNDDIMMYQFLKHYN 134 Query: 150 VSYQIVLTKIDKLSPT 165 + I+ TK+DKL + Sbjct: 135 IPVVIIGTKLDKLKKS 150 >gi|162447399|ref|YP_001620531.1| GTPase [Acholeplasma laidlawii PG-8A] gi|229807530|sp|A9NFM5|ENGB_ACHLI RecName: Full=Probable GTP-binding protein EngB gi|161985506|gb|ABX81155.1| GTPase, YihA subfamily [Acholeplasma laidlawii PG-8A] Length = 191 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 17/191 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ I LPK GRSNVGKSSLIN + NRK LAR S PG+T LN ++ Sbjct: 8 FITSAVSITDLPKDDFDHFLILGRSNVGKSSLINAITNRKKLARVSQTPGKTITLNLYLL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD PGYGYA+ K ++ +I Y+ L+ + LL+D G Sbjct: 68 N---------QSLYLVDAPGYGYAKRSKTQTLTFMRMINEYIQLNGHLKKIILLVDFNIG 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 Q D D++ L V +V TK DK+ S QE + ++K+ ++ T Sbjct: 119 PTQDDLDMYIELQAFDVDIIVVTTKYDKVKSSHRLKQEKVIRSKFF------EGQKIYFT 172 Query: 192 SSVKRKGIEVL 202 SS + GI+ L Sbjct: 173 SSETKFGIDKL 183 >gi|331703271|ref|YP_004399958.1| putative GTP binding protein EngB [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801826|emb|CBW53979.1| Probable GTP binding protein EngB [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 196 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 54/136 (39%), Positives = 71/136 (52%), Gaps = 8/136 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 EI GRSNVGKSS IN L N LA+ SN PG+T+ LNFF + N LV Sbjct: 23 SEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLLNFF--------EINKGEYRLV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PGYGYA+ + ++ Y R L+ V+LL+D RH D ++ FL Sbjct: 75 DAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSNDDIMMYQFLKHYN 134 Query: 150 VSYQIVLTKIDKLSPT 165 + I+ TK+DKL + Sbjct: 135 IPVVIIGTKLDKLKKS 150 >gi|294889300|ref|XP_002772751.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239877284|gb|EER04567.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 317 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 22/206 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL-NFFVPKDFSNLKNNLPAM 86 G P +AF GRSN GKSSL+N L+ + +AR S PGRT+ L F + +D + + Sbjct: 94 GVPTVAFCGRSNAGKSSLVNGLLFGRQVARASKTPGRTRQLFTFDLGRDEHIREGKGRPL 153 Query: 87 ALVDMPGYGYARAPKKNVDS-WGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVF 142 +VD+PG G+A+ + + W L+ Y+ LR V + LID GVK D+ ++ Sbjct: 154 RIVDLPGLGFAKGIDADQKAEWRALVGEYMERADNLRLVVIIVSLIDVIEGVKSTDEYLW 213 Query: 143 SF----LDKKAVSYQ--------IVLTKIDKLSPTTAQET----LEKTKYLIRNYP-TAH 185 ++ +++ + +VLTK+D++ PTT E L + +Y + Y T Sbjct: 214 KLTVRSMENRSIMEEGPPPPRLMVVLTKVDRVLPTTLHEEVASILSRIEYWQQEYDLTFW 273 Query: 186 PEVIPTSSVKRKGIEVLRKAILETIN 211 P V S+ G+ LR A++E ++ Sbjct: 274 PYVHCVSAQDGHGMSELRAALVEAMD 299 >gi|153952494|ref|YP_001398392.1| GTPase EngB [Campylobacter jejuni subsp. doylei 269.97] gi|166225948|sp|A7H4G2|ENGB_CAMJD RecName: Full=Probable GTP-binding protein EngB gi|152939940|gb|ABS44681.1| GTP-binding protein [Campylobacter jejuni subsp. doylei 269.97] Length = 199 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 99/185 (53%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 24 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVTCKRNEEKFNIN---F 80 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 81 IDLPGFGYAKVSKNLKEIWNQNLDEFLKFRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRF 140 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK + + I S++ + G++ L Sbjct: 141 LRPDQKILK---VFTKCDKLNQS------EKAR-----LKNEFKDSILVSNLNKFGLDSL 186 Query: 203 RKAIL 207 I+ Sbjct: 187 EDVII 191 >gi|85057291|ref|YP_456207.1| GTPase EngB [Aster yellows witches'-broom phytoplasma AYWB] gi|84789396|gb|ABC65128.1| GTP-binding protein [Aster yellows witches'-broom phytoplasma AYWB] Length = 196 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 13/190 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + +P PEI GRSNVGKS+ IN L +K LA+ S PG+T LN++ Sbjct: 7 FVSSIVNFKYIPLKKQPEIVLVGRSNVGKSTFINALTQKKKLAKISKTPGKTITLNYY-- 64 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + + L+D PGYGYA+ K+ +I+ +L + S L+ ++ LID + G Sbjct: 65 -DINE------SFYLIDTPGYGYAKKSKEIKKQLLPMIIAFLEQTSNLKAIFQLIDFKVG 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 Q D + L + ++ K DK+ + + L+ ++ N+ + SS Sbjct: 118 ATQEDDRIHQVLLQAGFEVVLLFVKKDKVKKSLVPKQLK----MLVNHFSQIKYFFLISS 173 Query: 194 VKRKGIEVLR 203 +++G+E L+ Sbjct: 174 KQQEGLEELK 183 >gi|57236963|ref|YP_178764.1| GTPase EngB [Campylobacter jejuni RM1221] gi|81819540|sp|Q5HVC1|ENGB_CAMJR RecName: Full=Probable GTP-binding protein EngB gi|57165767|gb|AAW34546.1| GTP-binding protein [Campylobacter jejuni RM1221] gi|315058064|gb|ADT72393.1| GTP-binding protein EngB [Campylobacter jejuni subsp. jejuni S3] Length = 198 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVICKRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKAK-----LKNEFKDSILVSNLNKFGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|313665181|ref|YP_004047052.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma leachii PG50] gi|312949369|gb|ADR23965.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma leachii PG50] Length = 196 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 69/133 (51%), Gaps = 8/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 EI GRSNVGKSS IN L N LA+ SN PG+T+ LNFF N LV Sbjct: 23 SEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLLNFFEI--------NKGEYRLV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PGYGYA+ + ++ Y R L+ V+LL+D RH D ++ FL Sbjct: 75 DAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSNDDVMMYQFLKHYN 134 Query: 150 VSYQIVLTKIDKL 162 + I+ TK+DKL Sbjct: 135 IPVVIIGTKLDKL 147 >gi|156837576|ref|XP_001642810.1| hypothetical protein Kpol_365p8 [Vanderwaltozyma polyspora DSM 70294] gi|156113381|gb|EDO14952.1| hypothetical protein Kpol_365p8 [Vanderwaltozyma polyspora DSM 70294] Length = 334 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 28/192 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNR------KNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 PEIAF G SNVGKSSL+N L+ +A S PG T+ LNFF N+ N Sbjct: 144 PEIAFLGSSNVGKSSLLNSLLTNYQKSTLDKIAWASKRPGFTKSLNFF------NIGNRF 197 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD PGYGY ++ G L + YL R L +LLI G+ D ++ Sbjct: 198 ---RLVDTPGYGYNSTSRQ-----GNLTLHYLKNRKELIKCFLLISAEKGLNGNDMNMIE 249 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------KRK 197 F+ + V +++V TK+DKL T E + +++ +P++ P+++ T+S KR Sbjct: 250 FMAENGVPFELVFTKMDKLKNVTMLEKQIEDNNIMK-FPSS-PQLLFTNSEVSKKCRKRY 307 Query: 198 GIEVLRKAILET 209 G++ +R +L++ Sbjct: 308 GVDYVRLLVLQS 319 >gi|298708864|emb|CBJ30822.1| YihA1, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 356 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/146 (41%), Positives = 76/146 (52%), Gaps = 20/146 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 PE+A GRSNVGKS+L+N LV K A S PG T+ L+FF K Sbjct: 141 PEVALVGRSNVGKSTLLNALVGLKKHPDQRATVSKTPGETRTLDFF-----QIGKGKRAK 195 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCRHGVKQIDQDVFSF 144 M + DMPGYG+A A ++ W GL++ YL R L+ V LL+D RHG K+ D + Sbjct: 196 MIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLLLDARHGFKKADIEFLGL 255 Query: 145 L-DKKAVS---------YQIVLTKID 160 L D K S QI+LTK D Sbjct: 256 LYDPKGPSPLGKYRPPKIQILLTKCD 281 >gi|86153198|ref|ZP_01071402.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842924|gb|EAQ60135.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|315928939|gb|EFV08193.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 198 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVTCKRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHIHLEIDVNLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKAK-----LKNEFKDSILVSNLNKFGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|42560838|ref|NP_975289.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81829403|sp|Q6MTV5|ENGB_MYCMS RecName: Full=Probable GTP-binding protein EngB gi|42492334|emb|CAE76931.1| GTP-binding protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320730|gb|ADK69373.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 196 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/136 (39%), Positives = 71/136 (52%), Gaps = 8/136 (5%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 EI GRSNVGKSS IN L N LA+ SN PG+T+ LNFF + N LV Sbjct: 23 SEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLLNFF--------EINKGEYRLV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PGYGYA+ + ++ Y R L+ V+LL+D RH D ++ FL Sbjct: 75 DAPGYGYAKVDDNLKIQFAKMMEEYFINRRNLKGVFLLLDLRHKPSNDDIMMYQFLKHYN 134 Query: 150 VSYQIVLTKIDKLSPT 165 + I+ TK+DKL + Sbjct: 135 IPVVIIGTKLDKLKKS 150 >gi|83319725|ref|YP_424232.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|119369215|sp|Q2SSN1|ENGB_MYCCT RecName: Full=Probable GTP-binding protein EngB gi|83283611|gb|ABC01543.1| GTP-binding conserved hypothetical protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 196 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 69/133 (51%), Gaps = 8/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 EI GRSNVGKSS IN L N LA+ SN PG+T+ LNFF N LV Sbjct: 23 SEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLLNFFEI--------NKGEYRLV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PGYGYA+ + ++ Y R L+ V+LL+D RH D ++ FL Sbjct: 75 DAPGYGYAKVDDSIKIQFAKMMEEYFINRKNLKGVFLLLDLRHKPSNDDIMMYQFLKHYN 134 Query: 150 VSYQIVLTKIDKL 162 + I+ TK+DKL Sbjct: 135 IPVVIIGTKLDKL 147 >gi|15828710|ref|NP_326070.1| GTPase EngB [Mycoplasma pulmonis UAB CTIP] gi|24418391|sp|Q98QX1|ENGB_MYCPU RecName: Full=Probable GTP-binding protein EngB gi|14089652|emb|CAC13412.1| GTP-BINDING PROTEIN [Mycoplasma pulmonis] Length = 186 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 94/176 (53%), Gaps = 15/176 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F GRSNVGKSSLIN L N +++ SN PGRTQ +NFF D N+ VD Sbjct: 21 EICFIGRSNVGKSSLINSLSNSA-VSKVSNTPGRTQLINFF-EDDQKNV--------YVD 70 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYG+A+ PK ++ +I YL R L+ + LL D R G+ D D ++ + Sbjct: 71 LPGYGFAQMPKDKLEKMHQMIDEYLQNRKNLKTIVLLFDSRRGILDQDLDFINWAQQAKK 130 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + ++ TKIDKL+ + L K L V+ SS+KR I+ L+K + Sbjct: 131 NIILLATKIDKLNQAQKHKLLVSLKEL-----NLEKSVLLVSSLKRTNIDNLKKLL 181 >gi|86149895|ref|ZP_01068124.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596910|ref|ZP_01100146.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562300|ref|YP_002344079.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|13124225|sp|Q9PHL7|ENGB_CAMJE RecName: Full=Probable GTP-binding protein EngB gi|85839713|gb|EAQ56973.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190599|gb|EAQ94572.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360006|emb|CAL34795.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 198 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 99/185 (53%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVICRRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKAK-----LKNEFKDSILVSNLNKFGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|299745493|ref|XP_001831753.2| hypothetical protein CC1G_08357 [Coprinopsis cinerea okayama7#130] gi|298406611|gb|EAU90084.2| hypothetical protein CC1G_08357 [Coprinopsis cinerea okayama7#130] Length = 236 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 21/191 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G PE+ +GR+N GKS+L+N ++ RK L TS+ GRT+ LNF+ + + Sbjct: 52 GLPEVIVTGRANAGKSTLLNAVLGRKALLHTSSKAGRTRELNFY------RVGEEPGHLI 105 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD PGYG + WG L YL R LR VY+L + +HG+ + D+ + L + Sbjct: 106 LVDAPGYG-----ARGRIEWGRLFDAYLDTRKELRRVYILFNAKHGLNEFDRQMLQHLSQ 160 Query: 148 KAVS--------YQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPTSSVKRK- 197 K +S Q V+TK D + + T+ + K + P P +I + + Sbjct: 161 KLISTDGTQPWTLQSVITKADLVPTSQLSNTISRMRKEIFEASPLCLPPLITSCEMNPPF 220 Query: 198 GIEVLRKAILE 208 GIE +R+ I + Sbjct: 221 GIEKVRENIAQ 231 >gi|283956064|ref|ZP_06373551.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792384|gb|EFC31166.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 1336] Length = 198 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVTCKRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--- 145 +D+PG+GYA+ K W + +L R++++ LID RH +ID ++ +L Sbjct: 80 IDLPGFGYAKVSKNLKAIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDANLNDYLKRF 139 Query: 146 ---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 D+K + V TK DKL+ + EK K + I S++ + G++ L Sbjct: 140 LRPDQKILK---VFTKCDKLNQS------EKAK-----LKNKFKDSILVSNLNKIGLDSL 185 Query: 203 RKAIL 207 I+ Sbjct: 186 EDIII 190 >gi|327398616|ref|YP_004339485.1| GTP-binding protein engB [Hippea maritima DSM 10411] gi|327181245|gb|AEA33426.1| GTP-binding protein engB [Hippea maritima DSM 10411] Length = 213 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 96/188 (51%), Gaps = 25/188 (13%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P+IAF+GRSNVGKSSLIN +++RK +A S PG+T +N D Sbjct: 42 GLPQIAFAGRSNVGKSSLINAILSRK-IAYVSKNPGKTVMINAIKVND---------RFY 91 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD- 146 +D+PGYGYAR K+ + W I YL + L V++L+D RH +D D+ FLD Sbjct: 92 FIDLPGYGYARRSKQMRNKWRKTIEDYLKNSNLLYHVFVLVDSRH--LPMDNDIM-FLDW 148 Query: 147 ----KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 KK ++ +V TK DK + + K I N+ TSS K++ I+ L Sbjct: 149 LRFYKK--TFSVVFTKTDKSTQKDISANISYLKKQIGNFS-----YFLTSSKKKRDIDKL 201 Query: 203 RKAILETI 210 I E + Sbjct: 202 CDFIAERV 209 >gi|57167676|ref|ZP_00366816.1| GTP-binding protein EngB [Campylobacter coli RM2228] gi|57020798|gb|EAL57462.1| GTP-binding protein EngB [Campylobacter coli RM2228] Length = 196 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 28/188 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFSNLKNNLPAM 86 E+AF GRSNVGKSSLIN L +K LA++S PG+TQ +N F KD ++ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKKLAKSSATPGKTQLINIFEVLCKKDEDKF-----SI 77 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL- 145 +D+PG+GYA+ K + W + +L RS+++ LID RH ID ++ +L Sbjct: 78 HFIDLPGFGYAKVSKNLKEIWNKNLDEFLKLRSSIKLFVHLIDSRHTNLDIDLNLDEYLK 137 Query: 146 -----DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 D++ + V TK DKL+ + EK K L N+ A I S++ + G++ Sbjct: 138 SFLKPDQRVLK---VFTKCDKLNQS------EKAK-LKNNFKDA----ILISNLNKMGLD 183 Query: 201 VLRKAILE 208 L I++ Sbjct: 184 DLEHEIIK 191 >gi|308183722|ref|YP_003927849.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori PeCan4] gi|308065907|gb|ADO07799.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori PeCan4] Length = 208 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 103/200 (51%), Gaps = 12/200 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEV 188 +ID++ L K +Y + TK DKL+ L K + N TAH Sbjct: 127 LNLEIDKNAKENIQALLKPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLIN--TAHFNA 184 Query: 189 IPTSSVKRKGIEVLRKAILE 208 + S K +EV+R+ +L+ Sbjct: 185 L---SSKYPTLEVVRQTLLK 201 >gi|325120273|emb|CBZ55827.1| putative GTP-binding protein [Neospora caninum Liverpool] Length = 499 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 104/212 (49%), Gaps = 54/212 (25%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLART-------------------SNAPGR 64 LP P++A G SNVGKSSL+N L++ +++AR+ S+APGR Sbjct: 283 LPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSIPLPNGKVLTLPKVAPVSHAPGR 342 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 T+HL F +L N+L +LVD+PGYG+AR + + W LI Y + + Sbjct: 343 TRHLFTF------DLGNHL---SLVDLPGYGFARVKPQLKEEWAILIEEYFTRSKHTK-- 391 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE----------TLEKT 174 GV+ +D+ ++ L +K + +Q+VLTK+D LS E T+EK Sbjct: 392 --------GVEPLDEKLWQLLAEKDLPFQVVLTKVDLLSAPQLHEAMFNVLTRLQTVEKK 443 Query: 175 KYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + L+ HP V SS GI LR ++ Sbjct: 444 ETLL------HPFVHAVSSRYNHGIPELRASL 469 >gi|317178289|dbj|BAJ56078.1| GTPase EngB [Helicobacter pylori F16] Length = 208 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 12/200 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R++++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWKGFLWELLSVRASIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEV 188 +ID++ L + +Y + TK DKL+ L K + N TAH Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLIN--TAHFNA 184 Query: 189 IPTSSVKRKGIEVLRKAILE 208 + S K +E++R+ +L+ Sbjct: 185 L---SSKYPTLEIVRQTLLK 201 >gi|301622385|ref|XP_002940516.1| PREDICTED: GTP-binding protein 8-like [Xenopus (Silurana) tropicalis] Length = 282 Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 66/184 (35%), Positives = 95/184 (51%), Gaps = 21/184 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKN 81 P PE+ F GRSNVGKSSLI L + R S PG T+ +NFF V + F+ Sbjct: 103 PGLTQPEVCFIGRSNVGKSSLIKALFSLVPGIEVRVSKTPGHTKKMNFFKVGRAFT---- 158 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVDMPGYGY +AP+ D ++ YL R+ L+ +LL+D G ++ D Sbjct: 159 ------LVDMPGYGY-KAPEDFAD----MVEPYLQVRNNLKRTFLLVDSSIGFQKADLVA 207 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTA--QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 ++ + Y IV TKID+ PT + LE +++ + +P+ SSV+ GI Sbjct: 208 VEMCEEFGIPYVIVATKIDR-PPTGVLLTQYLEIQEFIEKQTQGCYPQPFLVSSVQFSGI 266 Query: 200 EVLR 203 +LR Sbjct: 267 HLLR 270 >gi|119600062|gb|EAW79656.1| GTP-binding protein 8 (putative), isoform CRA_d [Homo sapiens] Length = 304 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/178 (37%), Positives = 95/178 (53%), Gaps = 23/178 (12%) Query: 34 FSGR----SNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAM 86 F GR SNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 131 FPGRPARGSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFT--------- 181 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VDMPGYG+ RAP+ VD ++ YL ER L+ +LL+D G+++ D + Sbjct: 182 -VVDMPGYGF-RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCE 235 Query: 147 KKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + A+ Y IVLTKIDK S ++ L+ K++ P++ P S+V GI +LR Sbjct: 236 EFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLR 293 >gi|187608547|ref|NP_001119874.1| GTP-binding protein 8 [Danio rerio] gi|190359519|sp|B0S8I0|GTPB8_DANRE RecName: Full=GTP-binding protein 8 gi|169158070|emb|CAQ13662.1| novel protein similar to vertebrate GTP-binding protein 8 (putative) (GTPBP8) [Danio rerio] Length = 286 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/187 (35%), Positives = 94/187 (50%), Gaps = 19/187 (10%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLK 80 +P PE+ F GRSNVGKSSLI L + + R S PG T+ LNFF V K F+ Sbjct: 101 VPILKQPEVCFMGRSNVGKSSLIRALFSLAPEVEVRVSKTPGHTKKLNFFTVGKAFT--- 157 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVDMPGYG+ AP+ V+ ++ YL ER L +LL+D G++ D Sbjct: 158 -------LVDMPGYGHM-APQDFVE----MVEPYLQERHNLARTFLLVDASAGLQSTDLV 205 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPTSSVKRKGI 199 ++ + Y +V+TKID+ + + I+ TA P+ SSV+ GI Sbjct: 206 AVEMFEEFNLPYVLVVTKIDRTRQGALLALALELQDFIKKQTTACFPQPFLVSSVQFSGI 265 Query: 200 EVLRKAI 206 +LR I Sbjct: 266 HLLRCFI 272 >gi|332213180|ref|XP_003255698.1| PREDICTED: GTP-binding protein 8-like [Nomascus leucogenys] Length = 288 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 97/187 (51%), Gaps = 23/187 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF-VPKDFSNLKN 81 P PE+ F GRSNVGKSSLI L + + R S PG T+ +NFF V K F+ Sbjct: 106 PDLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFT---- 161 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS----TLRCVYLLIDCRHGVKQI 137 +VDM GYGY RAP+ VD ++ YL ER ++ +LL+D G+++ Sbjct: 162 ------VVDMKGYGY-RAPEDFVD----MVETYLKERRGRARNVKRTFLLVDSVVGIQKT 210 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++ A+ Y IVLTKID+ S ++ L K++ P++ P S+V Sbjct: 211 DNIAIEMCEEFALPYVIVLTKIDRSSKGHLLKQVLRIQKFVNTKTQGYFPQLFPVSAVTF 270 Query: 197 KGIEVLR 203 GI +LR Sbjct: 271 SGIHLLR 277 >gi|323452002|gb|EGB07877.1| hypothetical protein AURANDRAFT_64442 [Aureococcus anophagefferens] Length = 690 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 20/204 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP +G PE+AF+GRSNVGKS+L+ L+ L R S PG T +NFF + Sbjct: 484 LPTSGVPEVAFAGRSNVGKSTLVGALLGDPALLRRSKTPGCTTSVNFFAVGRPGAPRRGG 543 Query: 84 PA-------------MALVDMPGYGYARAPKKNVDSWGGLIVRYLSER--STLRCVYLLI 128 P + +VD+PG+GYAR + +++G + YLS R + LR V +L+ Sbjct: 544 PRGAASDARRAAAAKLFVVDLPGFGYARRGGERREAFGAAALAYLSSRPGAVLRQVCVLV 603 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTAHPE 187 D R G D V + V +++VLTK D+ S L TK L R ++ Sbjct: 604 DARRGP---DPAVLESFSELRVPHRVVLTKCDRASAADVATALAATKDALDRPRRSSLLP 660 Query: 188 VIPTSSVKRK-GIEVLRKAILETI 210 V+ S K G++ LR+ + + + Sbjct: 661 VVHVVSAKTGFGVDDLRRHLADVV 684 >gi|301165825|emb|CBW25398.1| putative GTP-binding protein engB [Bacteriovorax marinus SJ] Length = 224 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 11/182 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN------LPA 85 ++F GRSNVGKSS IN L K +A+ S PGRT+ +N F K LKN+ LP Sbjct: 35 LSFVGRSNVGKSSTINTLFGNK-IAKVSKTPGRTREINIFSFK----LKNDGKIVEDLPE 89 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 D+PGYG+A K+ +W L+ + S + + D RH ++ DQ+ FL Sbjct: 90 FYFYDLPGYGHAEVSKEMSKNWEILMTTFFQNISLHTLMVNIQDARHPNQKSDQEFHQFL 149 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ KIDKL + L K K ++ ++ TS+ K+ GI + +A Sbjct: 150 KGFNFETFLLFNKIDKLKKQKERAALNKLKPVLSKEFKWVRQIYFTSAEKKDGIAQVEEA 209 Query: 206 IL 207 I+ Sbjct: 210 II 211 >gi|305433183|ref|ZP_07402339.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter coli JV20] gi|304443884|gb|EFM36541.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter coli JV20] Length = 196 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 28/188 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFSNLKNNLPAM 86 E+AF GRSNVGKSSLIN L +K LA++S PG+TQ +N F KD ++ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKKLAKSSATPGKTQLINIFEVLCKKDEDKF-----SI 77 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL- 145 +D+PG+GYA+ K + W + +L RS+++ LID RH ID ++ +L Sbjct: 78 HFIDLPGFGYAKVSKNLKEIWNKNLDEFLKLRSSIKLFVHLIDSRHTNLDIDLNLDKYLK 137 Query: 146 -----DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 D++ + V TK DKL+ + EK K + + I S++ + G++ Sbjct: 138 SFLKPDQRVLK---VFTKCDKLNQS------EKAK-----LKNSFKDAILISNLNKMGLD 183 Query: 201 VLRKAILE 208 L +++ Sbjct: 184 DLEHEVIK 191 >gi|261838854|gb|ACX98620.1| GTPase [Helicobacter pylori 51] gi|315585973|gb|ADU40354.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori 35A] Length = 208 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 12/200 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEV 188 +ID++ L + +Y + TK DKL+ L K + N TAH Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLIN--TAHFNA 184 Query: 189 IPTSSVKRKGIEVLRKAILE 208 + S K +E++R+ +L+ Sbjct: 185 L---SSKYPTLEIVRQTLLK 201 >gi|332674378|gb|AEE71195.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori 83] Length = 208 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 12/200 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTAEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEV 188 +ID++ L + +Y + TK DKL+ L K + N TAH Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLIN--TAHFNA 184 Query: 189 IPTSSVKRKGIEVLRKAILE 208 + S K +E++R+ +L+ Sbjct: 185 L---SSKYPTLEIVRQTLLK 201 >gi|210135745|ref|YP_002302184.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori P12] gi|238058984|sp|B6JP76|ENGB_HELP2 RecName: Full=Probable GTP-binding protein EngB gi|210133713|gb|ACJ08704.1| GTP-binding protein EngB [Helicobacter pylori P12] Length = 208 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R++++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|238809710|dbj|BAH69500.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 195 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 11/196 (5%) Query: 12 WIFL-RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 W F+ + + L ++ F GRSNVGKSSL+N + N+ N++ S PGRTQ +N+ Sbjct: 3 WKFITSAIDKKQWLDCKNSFQVCFWGRSNVGKSSLLNAITNQ-NISFVSKHPGRTQLINY 61 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + +VD+PGYGYA K+ V + +L + + ++LLID Sbjct: 62 FADNN---------DKYIVDLPGYGYAEISKEKVIKMNLAVKDFLKNEPSPKHIFLLIDS 112 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + D + +FL+ +Y IV TKIDKL+ ++K L +V Sbjct: 113 RTRFTKNDLETLTFLNSLNWNYDIVYTKIDKLNQKEKSALIKKHNELNSKIFKKSAQVFL 172 Query: 191 TSSVKRKGIEVLRKAI 206 SS K ++ + + I Sbjct: 173 VSSQKNINLDDIVQHI 188 >gi|317011804|gb|ADU85551.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori SouthAfrica7] Length = 208 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKS+ IN L+ KNLA++S+ PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSSTPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L +++D+PG+GYA+ K W G + L R++++ LID RH Sbjct: 67 TTWEDKENALTTTFSVIDLPGFGYAKVSKSLKKEWEGFLWELLGVRTSIKLFIHLIDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LDLEIDKNAKENIQTLLRPDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|217033821|ref|ZP_03439246.1| hypothetical protein HP9810_877g25 [Helicobacter pylori 98-10] gi|216943719|gb|EEC23162.1| hypothetical protein HP9810_877g25 [Helicobacter pylori 98-10] Length = 208 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 12/200 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEV 188 +ID++ L + +Y TK DKL+ L K + N TAH Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSFFTKFDKLNKNEQHRLFLNAPKPFLIN--TAHFNA 184 Query: 189 IPTSSVKRKGIEVLRKAILE 208 + S K +E++R+ +L+ Sbjct: 185 L---SSKYPTLEIVRQTLLK 201 >gi|261840260|gb|ACY00026.1| GTPase EngB [Helicobacter pylori 52] Length = 208 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|308062850|gb|ADO04738.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori Cuz20] Length = 208 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 12/200 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALKATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEV 188 +ID++ L + +Y + TK DKL+ L K + N +AH Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLIN--SAHFNA 184 Query: 189 IPTSSVKRKGIEVLRKAILE 208 + S K +E++R+ +L+ Sbjct: 185 L---SSKYPTLEIVRQTLLK 201 >gi|219123096|ref|XP_002181867.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406468|gb|EEC46407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 489 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 8/147 (5%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSN 78 + L P + PE+AF GRSNVGKSSLIN L+ R++LAR S PGRTQ ++ F VP+ + Sbjct: 201 LQLPPDSDVPEVAFLGRSNVGKSSLINALM-RRDLARISKQPGRTQQVHLFGIVPRAYEP 259 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNV-DSWGGLIVRYLSER----STLRCVYLLIDCRHG 133 + A A +SW L R+L R LR ++LL+D RHG Sbjct: 260 HHHPRTTTAPPPRTTPPPLAAYSSICPESWQVLTQRFLRTRRRDTGNLRRLFLLVDARHG 319 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKID 160 + ID V ++L+ + Y +VLTK D Sbjct: 320 TQTIDHFVMTWLEDNDIPYTVVLTKAD 346 >gi|317182792|dbj|BAJ60576.1| GTPase EngB [Helicobacter pylori F57] Length = 208 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 12/200 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSGQLSQCPASLTSEMVILGRSNVGKSSFINALLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEV 188 +ID++ L + +Y + TK DKL+ L K + N TAH Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLIN--TAHFNA 184 Query: 189 IPTSSVKRKGIEVLRKAILE 208 + S K +E++R+ +L+ Sbjct: 185 L---SSKYPTLEIVRQTLLK 201 >gi|308189736|ref|YP_003922667.1| GTP-binding protein [Mycoplasma fermentans JER] gi|307624478|gb|ADN68783.1| GTP-binding protein [Mycoplasma fermentans JER] Length = 194 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 11/196 (5%) Query: 12 WIFL-RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 W F+ + + L ++ F GRSNVGKSSL+N + N+ N++ S PGRTQ +N+ Sbjct: 2 WKFITSAIDKKQWLDCKNSFQVCFWGRSNVGKSSLLNAITNQ-NISFVSKHPGRTQLINY 60 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + +VD+PGYGYA K+ + + +L + + ++LLID Sbjct: 61 FADNN---------DKYIVDLPGYGYAEISKEKIIKMNLAVKDFLKNEPSPKHIFLLIDS 111 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + D + +FL+ +Y IV TKIDKL+ ++K L +V Sbjct: 112 RTRFTKNDLETLTFLNSLNWNYDIVYTKIDKLNQKEKSALIKKHNELNSKIFKKSAQVFL 171 Query: 191 TSSVKRKGIEVLRKAI 206 SS K ++ + + I Sbjct: 172 VSSQKNINLDDIVQHI 187 >gi|217031722|ref|ZP_03437226.1| hypothetical protein HPB128_155g35 [Helicobacter pylori B128] gi|298737141|ref|YP_003729671.1| GTP-binding protein [Helicobacter pylori B8] gi|216946569|gb|EEC25169.1| hypothetical protein HPB128_155g35 [Helicobacter pylori B128] gi|298356335|emb|CBI67207.1| GTP-binding protein [Helicobacter pylori B8] Length = 208 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKS+ IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L ++D+PG+GYA+ K W G + LS R +++ LID RH Sbjct: 67 TTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLIDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LDLEIDKNAKENIQALLRPDQAYLTLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|15646174|ref|NP_208358.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori 26695] gi|6226454|sp|O26087|ENGB_HELPY RecName: Full=Probable GTP-binding protein EngB gi|2314750|gb|AAD08606.1| conserved hypothetical GTP-binding protein [Helicobacter pylori 26695] Length = 208 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 12/202 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEV 188 +ID++ L + +Y + TK DKL+ L K + N TAH Sbjct: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLIN--TAHFNA 184 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 + S K +E++R+ +L+ + Sbjct: 185 L---SSKYPTLEIVRQTLLKHL 203 >gi|23006723|ref|ZP_00048912.1| COG0218: Predicted GTPase [Magnetospirillum magnetotacticum MS-1] Length = 110 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 46/101 (45%), Positives = 62/101 (61%) Query: 106 SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 +W LI YL RS L VY+LID RHG+K ID D+ LDK AVSYQ+VLTK D+L + Sbjct: 1 AWTKLIHAYLKGRSNLARVYVLIDSRHGLKSIDTDLLDGLDKAAVSYQVVLTKGDELKKS 60 Query: 166 TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ + + P A+PEV+ TSS +G+ LR +I Sbjct: 61 EIDRRIQGIQAALAKRPAAYPEVLLTSSRDDRGVAELRASI 101 >gi|253732325|ref|ZP_04866490.1| possible GTPase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253723925|gb|EES92654.1| possible GTPase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 106 Score = 88.6 bits (218), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 9/95 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ N+ L Sbjct: 21 PETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY------NIDEQL- 73 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 VD+PGYGYA+ K + +G +I Y+++R Sbjct: 74 --IFVDVPGYGYAKVSKTQREKFGKMIEEYITKRE 106 >gi|188528359|ref|YP_001911046.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori Shi470] gi|238691958|sp|B2UVY4|ENGB_HELPS RecName: Full=Probable GTP-binding protein EngB gi|188144599|gb|ACD49016.1| GTPase EngB [Helicobacter pylori Shi470] gi|308064349|gb|ADO06236.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori Sat464] Length = 208 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 12/202 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSGQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEV 188 +ID++ L + +Y + TK DKL+ L K + N +AH Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLIN--SAHFNA 184 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 + S K +EV+R+ +L+ + Sbjct: 185 L---SSKYPTLEVVRQTLLKYL 203 >gi|254780098|ref|YP_003058205.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori B38] gi|254002011|emb|CAX30270.1| GTP-binding protein [Helicobacter pylori B38] Length = 208 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|297380742|gb|ADI35629.1| GTP-binding conserved hypothetical protein [Helicobacter pylori v225d] Length = 208 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 6/154 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLS 163 +ID++ L + +Y + TK DKL+ Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLN 160 >gi|302843904|ref|XP_002953493.1| hypothetical protein VOLCADRAFT_82197 [Volvox carteri f. nagariensis] gi|300261252|gb|EFJ45466.1| hypothetical protein VOLCADRAFT_82197 [Volvox carteri f. nagariensis] Length = 295 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 77/148 (52%), Gaps = 9/148 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L+ + P PE A GRSNVGKSSLIN+L RK+LA S PG+T+ +N F Sbjct: 87 YLQSCVTVSDCPTPRFPEFAVIGRSNVGKSSLINMLTGRKDLALVSKQPGKTKCINHF-- 144 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L N + VD+PGYG+A+ + + Y R L V+LL+D Sbjct: 145 -----LING--SWYFVDLPGYGFAKVGVQGRQQFDTFTREYFKTRPNLAMVFLLVDASIP 197 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 ++ID + ++L V + +V TK+DK Sbjct: 198 PQKIDLEYANWLTDNEVPFTLVFTKVDK 225 >gi|163860137|gb|ABY41232.1| putative GTP-binding protein [Pseudomonas fluorescens] Length = 146 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 50/125 (40%), Positives = 67/125 (53%), Gaps = 10/125 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFKL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L VD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 75 DDERRL---------VDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLKGLILMMDIRHP 125 Query: 134 VKQID 138 + D Sbjct: 126 MTDFD 130 >gi|307638254|gb|ADN80704.1| GTP-binding protein [Helicobacter pylori 908] gi|325996846|gb|ADZ52251.1| GTP-binding protein [Helicobacter pylori 2018] gi|325998438|gb|ADZ50646.1| Ribosome biogenesis GTP-binding protein [Helicobacter pylori 2017] Length = 208 Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKS+ IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L ++D+PG+GYA+ K W G + LS R++++ L+D RH Sbjct: 67 TTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|323451478|gb|EGB07355.1| hypothetical protein AURANDRAFT_65026 [Aureococcus anophagefferens] Length = 658 Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 50/125 (40%), Positives = 63/125 (50%), Gaps = 19/125 (15%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP+ GPPE+ GRSNVGKSSL N L+ R+ LA TS PGRT+ +F+ ++ Sbjct: 475 LPEPGPPEVVLLGRSNVGKSSLANALLGRRALAPTSPVPGRTRRFHFYDVNSGDGAESER 534 Query: 84 PAMALVDMPGYGY-------------------ARAPKKNVDSWGGLIVRYLSERSTLRCV 124 P ALVD+PG G+ A A DSW L RYL R +L V Sbjct: 535 PRFALVDVPGAGFAVSDVAAALEDGGLARPGVAEAAGGKQDSWRSLTARYLDVRDSLAVV 594 Query: 125 YLLID 129 L+D Sbjct: 595 LQLVD 599 >gi|159477825|ref|XP_001697009.1| hypothetical protein CHLREDRAFT_150723 [Chlamydomonas reinhardtii] gi|158274921|gb|EDP00701.1| predicted protein [Chlamydomonas reinhardtii] Length = 276 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 9/132 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE A GRSNVGKSSLIN++ RK+LA S PG+T+ +N F+ + N LV Sbjct: 84 PEFAVIGRSNVGKSSLINMITGRKDLALVSKEPGKTKCINHFI------INEN---WYLV 134 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PGYG+A+ + + Y + R L V LL+D ++ID + ++L Sbjct: 135 DLPGYGFAKVGFQGRQQFDTFTKEYFNTRPNLAMVLLLVDASIKPQRIDLEYANWLTDNE 194 Query: 150 VSYQIVLTKIDK 161 V + IV TK DK Sbjct: 195 VPFTIVFTKADK 206 >gi|108563941|ref|YP_628257.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori HPAG1] gi|119369204|sp|Q1CR39|ENGB_HELPH RecName: Full=Probable GTP-binding protein EngB gi|107837714|gb|ABF85583.1| conserved hypothetical GTP-binding protein [Helicobacter pylori HPAG1] Length = 208 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALTTTFNVIDLPGFGYAKVSKNLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|299115211|emb|CBN74042.1| YihA6, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 462 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 8/144 (5%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 + P+ PEIAF GRSNVGKSS++N L + +A+ S PGRT+ +N F K+ N+ Sbjct: 276 IWPRTNLPEIAFLGRSNVGKSSMLNTLFG-EPVAKVSKTPGRTRKINIFKAKN----GND 330 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 D+PGYGYA+ K + + YL RS L+ + LL D R D V Sbjct: 331 KDVCYFADLPGYGYAKMSKDKQRTIEKFLGMYLERRSNLKLLILLADSRREPLASDAGVL 390 Query: 143 SFL-DKKAVSYQIVL--TKIDKLS 163 + DK+ Y+I+L TK+DKL+ Sbjct: 391 EYAEDKEDRLYKILLVATKVDKLN 414 >gi|28211962|ref|NP_782906.1| GTP-binding protein [Clostridium tetani E88] gi|28204405|gb|AAO36843.1| GTP-binding protein [Clostridium tetani E88] Length = 158 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 17/170 (10%) Query: 45 LINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKN 103 +IN L NR+ L + S PG+T+ +NFF + DF VD+PGYGYAR K+ Sbjct: 1 MINSLTNRRKLVKVSGKPGKTRLINFFLINNDF----------YFVDLPGYGYARVSKEE 50 Query: 104 VDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +WG I YL++R L+ + LL+D RH D + +++ +V TK DKL Sbjct: 51 KKNWGKTIETYLTDREQLKKIILLVDSRHKPTNDDVLMCNWIKYYGYDISVVATKSDKL- 109 Query: 164 PTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVLRKAILETIN 211 + L+K + +IR+ E +I S++ + G E L + I +T N Sbjct: 110 ---KRSELKKNEKIIRDTLDLSEEIKIIFHSTLNKSGREELLEDIFKTCN 156 >gi|208435446|ref|YP_002267112.1| conserved hypothetical GTP-binding protein [Helicobacter pylori G27] gi|238058985|sp|B5Z9J7|ENGB_HELPG RecName: Full=Probable GTP-binding protein EngB gi|208433375|gb|ACI28246.1| conserved hypothetical GTP-binding protein [Helicobacter pylori G27] Length = 208 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRISIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|190349143|gb|EDK41739.2| hypothetical protein PGUG_05837 [Meyerozyma guilliermondii ATCC 6260] Length = 354 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 25/158 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKN--LARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAM 86 PEI F G +NVGKSSL+N L + LA S PG TQ +N + V K F Sbjct: 144 PEILFLGHTNVGKSSLVNNLFGEGSGTLAYVSRQPGYTQTMNCYNVGKKFR--------- 194 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D PGYG K+ G +++ YL R LR VY+LID G+ D+++ L Sbjct: 195 -LIDSPGYGMRGEEKQ-----GQMVLEYLERRKVLRQVYVLIDAAQGMLPEDEEMLEHLI 248 Query: 147 KKAVSYQIVLTKIDKL-------SPTTAQETLEKTKYL 177 +S+ IVLTK+D++ P+ +E ++K K L Sbjct: 249 DSGISFDIVLTKVDQVIDRYVAQLPSKVKEAMKKEKTL 286 >gi|26553493|ref|NP_757427.1| GTPase EngB [Mycoplasma penetrans HF-2] gi|81748121|sp|Q8EX09|ENGB_MYCPE RecName: Full=Probable GTP-binding protein EngB gi|26453499|dbj|BAC43831.1| predicted GTP-binding protein [Mycoplasma penetrans HF-2] Length = 186 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 71/131 (54%), Gaps = 12/131 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F GRSNVGKSSLIN L N K +A+TSN PGRTQ NF+ DF + L+D Sbjct: 21 EICFIGRSNVGKSSLINALANAK-IAKTSNTPGRTQLANFY---DFDKFR-------LID 69 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA+ K +I Y+ R L V+ +ID + +D + L + Sbjct: 70 LPGYGYAKVSKSKHFELSKIISEYIYLRKNLVAVFQIIDI-SVITDLDLQMSELLSNRFN 128 Query: 151 SYQIVLTKIDK 161 + IVL K DK Sbjct: 129 QHYIVLNKADK 139 >gi|315926768|gb|EFV06142.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 146 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 4/119 (3%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMAL 88 E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF V + K N+ Sbjct: 23 SEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEVICRRNEEKFNIN---F 79 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D+PG+GYA+ K + W + +L R++++ LID RH +ID ++ +L + Sbjct: 80 IDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHTHLEIDVNLNDYLKR 138 >gi|308185354|ref|YP_003929487.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori SJM180] gi|308061274|gb|ADO03170.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori SJM180] Length = 208 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSGQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 ---GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 G+ + ++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LDLGIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|317015004|gb|ADU82440.1| GTP-binding protein YsxC [Helicobacter pylori Gambia94/24] Length = 208 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKS+ IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNL-PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L +D+PG+GYA+ K W G + LS R++++ L+D RH Sbjct: 67 TTWEDKENALMTTFNAIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LDLEIDKNAKESIQALLRPDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|294892269|ref|XP_002773979.1| GTP-binding protein/GTPase, putative [Perkinsus marinus ATCC 50983] gi|239879183|gb|EER05795.1| GTP-binding protein/GTPase, putative [Perkinsus marinus ATCC 50983] Length = 245 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 93/196 (47%), Gaps = 32/196 (16%) Query: 30 PEIAFSGRSNVGKSSLIN-ILVNRK---------------NLARTSNAPGRTQHLNFFVP 73 P + GRSNVGKS+LIN IL R+ A S GRT+H+ F Sbjct: 35 PAVVICGRSNVGKSTLINEILYGRQFDANKYRIRWSSDNITHAPVSRKAGRTRHVFRFDL 94 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS----ERSTLRCVYLLID 129 D + LVD+PGYG+A D W LI RYL + ++ V L+D Sbjct: 95 GD---------RLRLVDLPGYGFADVEGSVRDEWATLIERYLEVAGEDSEQVQRVISLVD 145 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-QETLEKTKYLIRNYPTA--HP 186 R GVK +D+ ++ L +K + +Q+VLTK+D + + +E T L++ Y P Sbjct: 146 SRRGVKGLDRALWEMLQEKKIPFQVVLTKVDLVRDVYGLHDVMENTIALLQEYDRELLWP 205 Query: 187 EVIPTSSVKRKGIEVL 202 V SS+ + G+ L Sbjct: 206 YVHSVSSLHKHGVNDL 221 >gi|317179768|dbj|BAJ57556.1| GTPase EngB [Helicobacter pylori F30] Length = 208 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L A ++D+PG+GYA+ K W G + L R +++ L+D RH Sbjct: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLIVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L N P P +I Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR-------LFLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E++R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLEIVRQTLLK 201 >gi|317013382|gb|ADU83990.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori Lithuania75] Length = 208 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 12/200 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKS+ IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNL-PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALITTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEV 188 +ID++ L + +Y + TK DKL+ L K + N TAH Sbjct: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLIN--TAHFNA 184 Query: 189 IPTSSVKRKGIEVLRKAILE 208 + S K +E++R+ +L+ Sbjct: 185 L---SSKYPTLEIVRQTLLK 201 >gi|317010258|gb|ADU80838.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori India7] Length = 208 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 20/204 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSGQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID+ L + +Y + TK DKL+ L+ N P P +I Sbjct: 127 LDLEIDKSAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR-------LLLNAP--KPFLI 177 Query: 190 PTS-----SVKRKGIEVLRKAILE 208 T+ S K +E +R+ +L+ Sbjct: 178 NTTHFNALSSKYPTLETVRQTLLK 201 >gi|317181269|dbj|BAJ59055.1| GTPase EngB [Helicobacter pylori F32] Length = 208 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 6/154 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLP-AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 67 TTWEDKENALRVTFNVIDLPGFGYAKVSKNLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLS 163 +ID++ L + +Y + TK DKL+ Sbjct: 127 LNLEIDKNAKENIQALLRPDQAYLSLFTKFDKLN 160 >gi|319776923|ref|YP_004136574.1| gtp-binding protein engb [Mycoplasma fermentans M64] gi|318037998|gb|ADV34197.1| Probable GTP-binding protein engB [Mycoplasma fermentans M64] Length = 194 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 11/196 (5%) Query: 12 WIFL-RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 W F+ + + L ++ F GRSNVGKSSL+N + N+ N++ S PGRTQ +N+ Sbjct: 2 WKFITSAIDKKQWLDCKNSFQVCFWGRSNVGKSSLLNAITNQ-NISFVSKHPGRTQLINY 60 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + +VD+ GYGYA K+ V + +L + + ++LLID Sbjct: 61 FADNN---------DKYIVDLHGYGYAEISKEKVIKMNLAVKDFLKNEPSPKHIFLLIDS 111 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + D + +FL+ +Y IV TKIDKL+ ++K L +V Sbjct: 112 RTRFTKNDLETLTFLNSLNWNYDIVYTKIDKLNQKEKSALIKKHNELNSKIFKKSAQVFL 171 Query: 191 TSSVKRKGIEVLRKAI 206 SS K ++ + + I Sbjct: 172 VSSQKNINLDDIVQHI 187 >gi|297745779|emb|CBI15835.3| unnamed protein product [Vitis vinifera] Length = 395 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 105/210 (50%), Gaps = 37/210 (17%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P PEIAF+GRSNVGKSS++N L + + RTS+ PG TQ +NFF L + L Sbjct: 187 FPPPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDKPGLTQTINFF------KLGSKL 240 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYL------------SE------RSTLRCVY 125 +LVD+PGYG+A A ++ DSW L+ Y+ SE S + Sbjct: 241 ---SLVDLPGYGFAYAKEEVKDSWEELVNEYMIMSCFNSIKKICSEVHKTFHNSIQHNIR 297 Query: 126 LLIDCRHGV----KQIDQDV---FSFLDKKA-VSYQIVLTKIDKLSP-TTAQETLEKTKY 176 L+ CR + ++ D+D+ F FL +A YQI+LTK D + P A+ ++ + Sbjct: 298 NLMFCRMIIILFLERQDKDLLFYFVFLFYRAQTKYQILLTKTDLVFPIDVARRAMQIEES 357 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L N P ++ SS GI LR + Sbjct: 358 LKANKSIVQP-LMMVSSKSGAGIPSLRTVL 386 >gi|145351401|ref|XP_001420069.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580302|gb|ABO98362.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 201 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/190 (32%), Positives = 90/190 (47%), Gaps = 17/190 (8%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAM 86 G PEIA GRSNVGKSSL+N + A S PG T +N + V K + Sbjct: 24 GLPEIALIGRSNVGKSSLLNSITFGAGAAAVSAKPGTTVSMNHYLVDKKWR--------- 74 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD+PGYGYA+A + ++ W Y R L V LL+D + D+ ++L Sbjct: 75 -LVDLPGYGYAKADAEAIERWDAFTKDYFVRRENLAGVLLLVDASVPPTENDERYANWLI 133 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH----PEVIPTSSVKRKGIEVL 202 + + IV TK D+ P ++++ K +R P +I TSSV +G + + Sbjct: 134 EHETPFTIVFTKCDRDKP--GMPSVDENKAALRRKLDEKWHRLPSMISTSSVTAEGRDEV 191 Query: 203 RKAILETINY 212 K + I Y Sbjct: 192 LKFVSSLIVY 201 >gi|71414564|ref|XP_809380.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70873752|gb|EAN87529.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 660 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 95/170 (55%), Gaps = 19/170 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S +F+K + L+ V + LP+ PE+ F G+ NVGKSS+I+ L++ + L R+ Sbjct: 49 LSDEVFSKGN-VHLKNVNTLSALPEGLHSFPEVCFIGKPNVGKSSIISCLLHNRRLGRSG 107 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG--YARAPKKNV---DSWGGLIVRY 114 + G T+ L FF D AM LVD PGYG R +N+ S ++ RY Sbjct: 108 STRGTTRILQFFNVGD---------AMLLVDTPGYGGWMGRQLSQNLAERASAFAILFRY 158 Query: 115 LSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 L+ R L+ VY +++ R ++ D+++F+FL ++ +++ ++L KID+ Sbjct: 159 LALRKQGPLKRVYWVMEARKPIQPRDEEIFAFLREQQINFSVILNKIDRF 208 >gi|71667548|ref|XP_820722.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70886078|gb|EAN98871.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 660 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 95/170 (55%), Gaps = 19/170 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S +F+K + L+ V + LP+ PE+ F G+ NVGKSS+I+ L++ + L R+ Sbjct: 49 LSDEVFSKGN-VHLKNVNTLSALPEGLHSFPEVCFIGKPNVGKSSIISCLLHNRRLGRSG 107 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG--YARAPKKNV---DSWGGLIVRY 114 + G T+ L FF D AM LVD PGYG R +N+ S ++ RY Sbjct: 108 STRGTTRILQFFNVGD---------AMLLVDTPGYGGWMGRQLSQNLAERASAFAILFRY 158 Query: 115 LSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 L+ R L+ VY +++ R ++ D+++F+FL ++ +++ ++L KID+ Sbjct: 159 LALRKQGPLKRVYWVMEARKPIQPRDEEIFAFLREQQINFSVILNKIDRF 208 >gi|50293963|ref|XP_449393.1| hypothetical protein [Candida glabrata CBS 138] gi|49528707|emb|CAG62369.1| unnamed protein product [Candida glabrata] Length = 328 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 108/195 (55%), Gaps = 30/195 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVN---RKNL---ARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 PEIAF G++NVGKS+++N L+ +K+L AR SN G T+ LN + N+ N Sbjct: 139 PEIAFLGKTNVGKSTILNNLITSFKQKDLDVHARMSNRAGFTKTLNCY------NVGNKF 192 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D PGYG+ A ++ G + + YLS R L+ +LLI + + + D+ + Sbjct: 193 ---RIIDTPGYGFHSAIEQ-----GNVTLDYLSNRKELKRCFLLISAKKEISEHDRYLMD 244 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVIPTSSV------KR 196 + + + ++++ +K+DK+ T E ++ +RN PT P++I T+S+ KR Sbjct: 245 LMTESGIPFELIFSKMDKV--TDVDEFVQWIDSSGLRNLPTL-PKLIFTNSMVSKFIKKR 301 Query: 197 KGIEVLRKAILETIN 211 G+++LR +I E N Sbjct: 302 YGVDLLRYSIFEACN 316 >gi|15612540|ref|NP_224193.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori J99] gi|11387370|sp|Q9ZJ42|ENGB_HELPJ RecName: Full=Probable GTP-binding protein EngB gi|4156107|gb|AAD07059.1| putative [Helicobacter pylori J99] Length = 208 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 6/154 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + P + E+ GRSNVGKS+ IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSNNLSQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + +N L ++D+PG+GYA+ K W G + LS R +++ LID RH Sbjct: 67 TTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLIDARH 126 Query: 133 GVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLS 163 +ID++ L + +Y + TK DKL+ Sbjct: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLN 160 >gi|254568034|ref|XP_002491127.1| Putative protein of unknown function [Pichia pastoris GS115] gi|238030924|emb|CAY68847.1| Putative protein of unknown function [Pichia pastoris GS115] gi|328352347|emb|CCA38746.1| tRNA modification GTPase mnmE [Pichia pastoris CBS 7435] Length = 323 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 15/135 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ F GR NVGKSSLIN L++ K LAR G T LN + N+ N + LV Sbjct: 141 PEVLFLGRCNVGKSSLINSLID-KPLARVKRFAGLTPCLNTY------NIGN---VVRLV 190 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PGYG K G L ++Y+ ER LR +YL+++ G+ + D+ + S L + Sbjct: 191 DSPGYGV-----KGKQWQGELTMQYIRERQQLRKIYLILNAHLGINEFDEMILSQLVESK 245 Query: 150 VSYQIVLTKIDKLSP 164 +S+ +V K+DK+SP Sbjct: 246 ISFDLVFNKVDKISP 260 >gi|183219980|ref|YP_001837976.1| ribosome biogenesis GTP-binding protein YsxC [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910104|ref|YP_001961659.1| ribosome biogenesis GTP-binding protein YsxC [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|254783202|sp|B0SC16|ENGB_LEPBA RecName: Full=Probable GTP-binding protein EngB gi|254783203|sp|B0SJA9|ENGB_LEPBP RecName: Full=Probable GTP-binding protein EngB gi|167774780|gb|ABZ93081.1| GTPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778402|gb|ABZ96700.1| Putative GTP-binding protein EngB [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 213 Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 10/179 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IAF GRSN GKSSL+N L N + LA+ S PG+T+ +N F K LVD+ Sbjct: 34 IAFMGRSNSGKSSLLNALSNHRGLAKVSRTPGKTKLINIFRTK---------VGFNLVDL 84 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG+GY++A K L+ +L+ L+ +++L D + + + +K + Sbjct: 85 PGFGYSKASHKEHKDMMNLLEGFLNSWKQLKILFILCDSQRDFPEEELSTIEVAMEKKIK 144 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++ TKIDKL+ + Q + N V S+ +GI LR+ ILET+ Sbjct: 145 PVVIRTKIDKLN-QSGQHKVRTEMEAAMNEIGIPFRVFYISASTGRGIGELREFILETL 202 >gi|226327660|ref|ZP_03803178.1| hypothetical protein PROPEN_01533 [Proteus penneri ATCC 35198] gi|225204186|gb|EEG86540.1| hypothetical protein PROPEN_01533 [Proteus penneri ATCC 35198] Length = 124 Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 47/116 (40%), Positives = 62/116 (53%), Gaps = 9/116 (7%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 T F F+ P+I LP EIAF+GRSN GKSS +N L + LARTS PGR Sbjct: 18 TQFNYQKAHFIISAPDIRHLPPDSGIEIAFAGRSNAGKSSALNALTQQNGLARTSKTPGR 77 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 TQ +N F ++ + LVD+PGYGYA+ P++ W + YL + S Sbjct: 78 TQLINLFQIEE---------GLRLVDLPGYGYAQVPEEMKRKWQRSLGEYLQKESA 124 >gi|290990802|ref|XP_002678025.1| predicted protein [Naegleria gruberi] gi|284091635|gb|EFC45281.1| predicted protein [Naegleria gruberi] Length = 442 Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 41/213 (19%) Query: 31 EIAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 EIA GRSNVGKSSL++ I + + S PGRTQ LN+F+ K + + LV Sbjct: 90 EIAIIGRSNVGKSSLVSSIFKGKATDVKISKTPGRTQTLNYFLLKRLN--------LYLV 141 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRH-------------- 132 DMPGYG+A+ PK + W LI Y R + L+D R Sbjct: 142 DMPGYGFAKVPKSLLRGWHVLIRDYFKHRMNYDKYLITLWLLDVRRIKDFADAIAKNPEN 201 Query: 133 ------GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK---------YL 177 G+K+ D + F +L K + Y IVLTK+DK + E ++ + Sbjct: 202 ATNPTLGLKKSDVEFFHYLVKNEIPYTIVLTKVDKQNYNVLGEVIKSLRILLLRELKELK 261 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + P +I +S+ + GI +R I T+ Sbjct: 262 MTKTVNISPNIILSSAKRGHGIPEIRNFIASTV 294 >gi|146412205|ref|XP_001482074.1| hypothetical protein PGUG_05837 [Meyerozyma guilliermondii ATCC 6260] Length = 354 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 25/158 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKN--LARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAM 86 PEI F G +NVGKSSL+N L + LA S PG TQ +N + V K F Sbjct: 144 PEILFLGHTNVGKSSLVNNLFGEGSGTLAYVSRQPGYTQTMNCYNVGKKFR--------- 194 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D PGYG K+ G +++ YL R LR VY+LID G+ D+++ L Sbjct: 195 -LIDSPGYGMRGEEKQ-----GQMVLEYLERRKVLRQVYVLIDAAQGMLPEDEEMLEHLI 248 Query: 147 KKAVSYQIVLTKIDKL-------SPTTAQETLEKTKYL 177 + + IVLTK+D++ P+ +E ++K K L Sbjct: 249 DSGILFDIVLTKVDQVIDRYVAQLPSKVKEAMKKEKTL 286 >gi|330996286|ref|ZP_08320171.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella xylaniphila YIT 11841] gi|329573478|gb|EGG55085.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella xylaniphila YIT 11841] Length = 157 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 14/166 (8%) Query: 48 ILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDS 106 +L N K LA+TS+ PG+T +N F + K++ LVD+PGYGYA+ KK + Sbjct: 1 MLANNKKLAKTSSTPGKTLLINHFLINKEW----------YLVDLPGYGYAKISKKEQEK 50 Query: 107 WGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 +I Y+ R + +++L+D RH ++ID + +L + + + IV TK DK PT Sbjct: 51 LQQIISSYILRREQMTNLFVLVDSRHEPQKIDMEFIEWLGENGIPFSIVFTKADKSKPTK 110 Query: 167 AQETLE-KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + ++ K L + P I +S K E+L +E+IN Sbjct: 111 LKANIDIYLKTLKEQWEELPPYFITSSENKTGRTELLN--YIESIN 154 >gi|20330773|gb|AAM19136.1|AC103891_16 Putative nucleotide binding protein [Oryza sativa Japonica Group] gi|27311248|gb|AAO00694.1| Putative nucleotide binding protein [Oryza sativa Japonica Group] gi|125585504|gb|EAZ26168.1| hypothetical protein OsJ_10034 [Oryza sativa Japonica Group] Length = 255 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 69/221 (31%), Positives = 89/221 (40%), Gaps = 42/221 (19%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A GRSNVGKSSLIN L+ RK A TS PG+TQ +N F+ Sbjct: 35 PKDDRPEFAVLGRSNVGKSSLINALIRRKEAALTSKKPGKTQTINHFLVNK--------- 85 Query: 85 AMALVDMPGYG------------------------------YARAPKKNVDSWGGLIVRY 114 + LVD+PGYG +A A + W Y Sbjct: 86 SWYLVDLPGYGMYHNDKIIDGIANGEKQSEKYNFALVFIGLFAAASQSARTDWSSFTKGY 145 Query: 115 LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT 174 R TL V LL+D ++ID D ++L + + V TK DK E Sbjct: 146 FLNRDTLVGVLLLVDASIPPQKIDIDCANWLGRNNIGLTYVFTKCDKSKKGKGGRPEENI 205 Query: 175 KYLIRNYPTAHPEVIP---TSSVKRKGIEVLRKAILETINY 212 K + +PE P TSSV G + L + + NY Sbjct: 206 KEFQETISSLYPEPPPWIMTSSVTGLGRDGLLLHMSQLRNY 246 >gi|322822159|gb|EFZ28291.1| hypothetical protein TCSYLVIO_5483 [Trypanosoma cruzi] Length = 367 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 19/170 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S +F+K + L+ V + LP+ PE+ F G+ NVGKSS+I+ L++ + L R+ Sbjct: 49 LSDEVFSKGN-VHLKNVNTLSALPEGLHSFPEVCFIGKPNVGKSSIISCLLHNRRLGRSG 107 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG--YARAPKKNV---DSWGGLIVRY 114 + G T+ L FF D A+ LVD PGYG R +N+ S ++ RY Sbjct: 108 STRGTTRILQFFNVGD---------AILLVDTPGYGGWMGRQLSQNLAERASAFAILFRY 158 Query: 115 LSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 L+ R L+ VY +++ R ++ D+++F+FL ++ +++ ++L KID+ Sbjct: 159 LALRKQGPLKRVYWVMEARKPIQPRDEEIFAFLREQQINFSVILNKIDRF 208 >gi|254577361|ref|XP_002494667.1| ZYRO0A06886p [Zygosaccharomyces rouxii] gi|238937556|emb|CAR25734.1| ZYRO0A06886p [Zygosaccharomyces rouxii] Length = 323 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 93/194 (47%), Gaps = 32/194 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNR------KNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G PE+AF G+SN GKS+L+N L AR S G T+ LN F N+ N Sbjct: 136 GLPEVAFLGKSNAGKSTLLNSLTTDLKQTSLGEYARASKRAGFTKTLNSF------NIGN 189 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 +VD PGYGY + ++ G L + Y+S+R L +LLI G +D + Sbjct: 190 KF---RIVDTPGYGYNSSAEQ-----GNLTMEYVSQRQQLARCFLLISGEQGFNDMDLQI 241 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------K 195 FL ++IV TK+DK+ + + + P P +I T+S+ K Sbjct: 242 VEFLSSIGKPFEIVFTKMDKVKDLKGFQNMN-----LHELP-GLPGIIFTNSLISKTCPK 295 Query: 196 RKGIEVLRKAILET 209 R G+++LR+ I ++ Sbjct: 296 RYGVDLLRRLIFQS 309 >gi|255714671|ref|XP_002553617.1| KLTH0E03036p [Lachancea thermotolerans] gi|238934999|emb|CAR23180.1| KLTH0E03036p [Lachancea thermotolerans] Length = 353 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 28/194 (14%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNR------KNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G PE+AF GR N GKS+L+N + + A+ S G T+ +N F N Sbjct: 161 GLPEVAFLGRCNAGKSTLLNNITTQFSHVKLNEYAKASKKAGFTKTVNCF---------N 211 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 ++D PGYG K+ G + +RYL ER L+ +LL+ G D V Sbjct: 212 IGGRFRIIDTPGYG-----GKSTQEQGDVTMRYLRERQELKRCFLLVSAEQGFATTDSQV 266 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------K 195 FL K + ++++ TK+DK+ + E + + ++ PT P++I +S K Sbjct: 267 VDFLTKFGIPFEVIFTKMDKIKDVSQLENVIEDSGVLE-LPTL-PQMIFLNSETNKRYPK 324 Query: 196 RKGIEVLRKAILET 209 R GI+ LR ILE+ Sbjct: 325 RYGIDALRSLILES 338 >gi|224011962|ref|XP_002294634.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220969654|gb|EED87994.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 160 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 79/155 (50%), Gaps = 29/155 (18%) Query: 31 EIAFSGRSNVGKSSLINILVN------------------------RKNLARTSNAPGRTQ 66 EIA +GRSNVGKS+L+N L+ R A TS+ PG T+ Sbjct: 3 EIALAGRSNVGKSTLLNALLYGNIDEALSPRKYVRGKTPDGAKLPRGVKAVTSDKPGETK 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 F D S + ++ LVD+PGYG+A A ++ W L+ YL ER L+ + + Sbjct: 63 E---FTVNDNSKEVAKM-SLLLVDLPGYGFAFAKEERTKEWKELMHHYLLERRCLKRILM 118 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAV-SYQIVLTKID 160 L+D RHG K+ID D + L + + Q+VLTK D Sbjct: 119 LLDARHGFKKIDYDFLADLQEGELPPIQLVLTKCD 153 >gi|237738527|ref|ZP_04569008.1| GTP-binding protein [Fusobacterium sp. 2_1_31] gi|229424229|gb|EEO39276.1| GTP-binding protein [Fusobacterium sp. 2_1_31] Length = 147 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 10/121 (8%) Query: 55 LARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRY 114 LARTS PGRTQ +N+F+ D +VD+PGYG+A+ PK+ WG + RY Sbjct: 3 LARTSKTPGRTQLINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERY 53 Query: 115 LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT 174 ++ + + V++L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ Sbjct: 54 IASKRK-KLVFVLLDIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAI 112 Query: 175 K 175 K Sbjct: 113 K 113 >gi|163785786|ref|ZP_02180281.1| Predicted GTPase [Hydrogenivirga sp. 128-5-R1-1] gi|159878946|gb|EDP72955.1| Predicted GTPase [Hydrogenivirga sp. 128-5-R1-1] Length = 156 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 88/169 (52%), Gaps = 18/169 (10%) Query: 45 LINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNV 104 LIN L NRK +A+ S PG+T+ +NFF D VD+PGYGYA KK Sbjct: 1 LINALFNRK-IAKVSATPGKTRLVNFFNVDD---------KFYFVDLPGYGYAAVSKKER 50 Query: 105 DSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 + W ++ Y + R L V LL+D RH +D + +L+ + Y +V TK+DKL+ Sbjct: 51 NQWQKMMNAYFNSRDNLNLVILLVDSRHKPTNLDFLMKEYLEALEIPYIVVGTKLDKLNQ 110 Query: 165 TT---AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + A++ +++T L N P +I TS+ ++ ++ + IL + Sbjct: 111 SEKAKAKKVIKETLELDDNVP-----IILTSAKEKINLDKVMSEILNAV 154 >gi|218192390|gb|EEC74817.1| hypothetical protein OsI_10639 [Oryza sativa Indica Group] Length = 348 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 71/221 (32%), Positives = 90/221 (40%), Gaps = 42/221 (19%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A GRSNVGKSSLIN L+ RK A TS PG+TQ +N F L N Sbjct: 128 PKDDRPEFAVLGRSNVGKSSLINALIRRKEAALTSKKPGKTQTINHF-------LVNK-- 178 Query: 85 AMALVDMPGYG------------------------------YARAPKKNVDSWGGLIVRY 114 + LVD+PGYG +A A + W Y Sbjct: 179 SWYLVDLPGYGMYHNDKIIDGIANGEKQSEKYNFALVFIGLFAAASQSARTDWSSFTKGY 238 Query: 115 LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT 174 R TL V LL+D ++ID D ++L + + V TK DK E Sbjct: 239 FLNRDTLVGVLLLVDASIPPQKIDIDCANWLGRNNIGLTYVFTKCDKSKKGKGGRPEENI 298 Query: 175 KYLIRNYPTAHPEVIP---TSSVKRKGIEVLRKAILETINY 212 K + +PE P TSSV G + L + + NY Sbjct: 299 KEFQETISSLYPEPPPWIMTSSVTGLGRDGLLLHMSQLRNY 339 >gi|294660541|ref|NP_853351.2| GTPase EngB [Mycoplasma gallisepticum str. R(low)] gi|298286806|sp|Q7NAR6|ENGB_MYCGA RecName: Full=Probable GTP-binding protein EngB gi|284812204|gb|AAP56919.2| GTPase EngB [Mycoplasma gallisepticum str. R(low)] gi|284930844|gb|ADC30783.1| GTPase EngB [Mycoplasma gallisepticum str. R(high)] gi|284931232|gb|ADC31170.1| GTPase EngB [Mycoplasma gallisepticum str. F] Length = 186 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 12/148 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + E+ GRSNVGKS++IN L N K +A+TS PGRT +NF+ Sbjct: 4 FIKSATSLKDCINDSKKEVCLIGRSNVGKSTIINGLANAK-IAQTSKTPGRTVTMNFY-- 60 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + SN + +VD+PGYGYAR K + + YL+ R L ++L++D Sbjct: 61 -EISNQR-------IVDLPGYGYARIKKSQKEEISLFLSDYLNHRKNLVGIFLILDLGVI 112 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 Q D ++ L V Y IV KIDK Sbjct: 113 TDQ-DIEIVRLLTTLDVEYYIVFNKIDK 139 >gi|308446118|ref|XP_003087101.1| hypothetical protein CRE_03606 [Caenorhabditis remanei] gi|308262503|gb|EFP06456.1| hypothetical protein CRE_03606 [Caenorhabditis remanei] Length = 271 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/94 (48%), Positives = 56/94 (59%), Gaps = 8/94 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + E+AF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 179 FLMSAPKLNLCVEDTGYEVAFAGRSNAGKSSAINALTNQKQLARASKRPGRTQMINFF-- 236 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSW 107 +L N P LVD+PGYGYA P+ W Sbjct: 237 ----SLGN--PDQRLVDLPGYGYAAVPEAMKIVW 264 >gi|219117025|ref|XP_002179307.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409198|gb|EEC49130.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 199 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/194 (34%), Positives = 93/194 (47%), Gaps = 14/194 (7%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINI-------LVNRKNLARTSNAPGRTQHLNFFVPKD 75 L P+ G PEIAF GRSNVGKSSL+N L + AR PG T +N + D Sbjct: 12 LPPRIGVPEIAFLGRSNVGKSSLLNRLSSSARQLPTHNDQARVGKTPGATASVNLYALLD 71 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + + VD+PG+GYA+ K+ +S YL+ R L LL+D R Sbjct: 72 AKESQ----ILGWVDLPGFGYAKLSKQVKESVQETAENYLARRQELVLGILLVDARRIPS 127 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D+ V + L + +V TK+DKL+P + L + + + P P +P SSV Sbjct: 128 NDDRAVLAALFDMGIPVVVVATKVDKLNPNELRSGLAEIRDGL-GLPDGQP--LPVSSVT 184 Query: 196 RKGIEVLRKAILET 209 +G L + ILE Sbjct: 185 GEGTRDLWRIILEA 198 >gi|322818866|gb|EFZ26152.1| hypothetical protein TCSYLVIO_7681 [Trypanosoma cruzi] Length = 705 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 21/203 (10%) Query: 13 IFLRG------VPEIGLLP--KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 IF RG I +P A PE+A +GR NVGK+SL+ + SN R Sbjct: 165 IFSRGHKHVCCATNISFVPDGNAAMPEVALAGRGNVGKTSLLRSIFRASREVGRSNVKLR 224 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 +NFF N+ + +VD+PG+G P V L+ ++ R +L+ + Sbjct: 225 RDAMNFF------NVGGGV--FNVVDLPGFGGTSVPWSTVLQHAVLLRNFVQYRPSLKML 276 Query: 125 YLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET--LEKTKYLIRN 180 Y +D +HGV D D+ FL K+ ++ IVLTK D+L T +++ LE + + Sbjct: 277 YYCMDVHYKHGVYIQDIDILRFLSKEVPNFTIVLTKGDQLDTTKSKDAFRLEDIRRELLF 336 Query: 181 YPTAHPEVIPTSSVKRKGIEVLR 203 + HP V+ TS+ GI+ LR Sbjct: 337 HDITHP-VLVTSAYHMGGIDALR 358 >gi|71650509|ref|XP_813951.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70878882|gb|EAN92100.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 631 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 21/203 (10%) Query: 13 IFLRG------VPEIGLLP--KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 IF RG I +P A PE+A +GR NVGK+SL+ L SN R Sbjct: 90 IFSRGHKHVCCATNISFVPDGNAAMPEVALAGRGNVGKTSLLRSLFRASREVGRSNVKLR 149 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 +NFF N+ + +VD+PG+G P V L+ ++ R +L+ + Sbjct: 150 RDAMNFF------NVGGGV--FNVVDLPGFGGTSVPWSTVLQHAVLLRNFVQYRPSLKML 201 Query: 125 YLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET--LEKTKYLIRN 180 Y +D +HGV D D+ FL K+ ++ IVLTK D+L T + + LE + + Sbjct: 202 YYCMDVHYKHGVYIQDIDILRFLSKEVPNFTIVLTKGDQLDTTKSNDAFRLEDIRRELLF 261 Query: 181 YPTAHPEVIPTSSVKRKGIEVLR 203 + HP V+ TS+ GI+ LR Sbjct: 262 HDITHP-VLVTSAYHMGGIDALR 283 >gi|71424998|ref|XP_812979.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70877819|gb|EAN91128.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 630 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 21/203 (10%) Query: 13 IFLRG------VPEIGLLP--KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 IF RG I +P A PE+A +GR NVGK+SL+ L SN R Sbjct: 90 IFSRGHKHVCCATNISFVPDGNAAMPEVALAGRGNVGKTSLLRSLFRASREVGRSNVKLR 149 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 +NFF N+ + +VD+PG+G P V L+ ++ R +L+ + Sbjct: 150 RDAMNFF------NVGGGV--FNVVDLPGFGGTSVPWSTVLQHAVLLRNFVQYRPSLKML 201 Query: 125 YLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET--LEKTKYLIRN 180 Y +D +HGV D D+ FL K+ ++ IVLTK D+L T +++ LE + + Sbjct: 202 YYCMDVHYKHGVYIQDIDILRFLSKEVPNFTIVLTKGDQLDTTKSKDAFRLEDIRRELLF 261 Query: 181 YPTAHPEVIPTSSVKRKGIEVLR 203 + HP ++ TS+ GI+ LR Sbjct: 262 HDITHPLLV-TSAYHMGGIDALR 283 >gi|71029450|ref|XP_764368.1| hypothetical protein [Theileria parva strain Muguga] gi|68351322|gb|EAN32085.1| hypothetical protein TP04_0732 [Theileria parva] Length = 365 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 23/198 (11%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVN-------RKNLARTSNAPGRTQHLNFFVPKD 75 +LP G PEI GRSNVGKSS IN L++ + ++A S PG T+ +N F D Sbjct: 152 MLPSLGLPEICLVGRSNVGKSSFINSLMSYIKNKSRKCDMAFVSKTPGYTKSINIFEAVD 211 Query: 76 FSNLKNNLPAMALVDMPGYGYARAP----KKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + ++LVD+PGYG+ +KN+ S ++ YL R L+ V L+D Sbjct: 212 ----SRDRGVLSLVDLPGYGHTEVKNAETRKNMQS---IMKAYLKRRHELKLVLFLVDGS 264 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIP 190 + D +V + + + + +LTK+DK++ P T + L ++ + P IP Sbjct: 265 WEPQDDDYEVLKYFREVGMPHLFILTKMDKVNVPETPAQILNFRQF----FDLKSPLPIP 320 Query: 191 TSSVKRKGIEVLRKAILE 208 S + + + KAIL+ Sbjct: 321 FSKLGGGDLGSIWKAILD 338 >gi|84997291|ref|XP_953367.1| GTP-binding protein/GTPase [Theileria annulata strain Ankara] gi|65304363|emb|CAI76742.1| GTP-binding protein/GTPase, putative [Theileria annulata] Length = 477 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 23/198 (11%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILV------NRK-NLARTSNAPGRTQHLNFFVPKD 75 +LP G PEI GRSNVGKSS IN L+ +RK ++A S PG T+ +N F D Sbjct: 192 MLPSLGLPEICLVGRSNVGKSSFINSLMTYVKNKSRKCDMAFVSKTPGYTKSINIFEAVD 251 Query: 76 FSNLKNNLPAMALVDMPGYGYAR----APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + ++LVD+PGYGY +KN+ S ++ YL R L+ V L+D Sbjct: 252 ----SRDRGVLSLVDLPGYGYTEIKNAETRKNMQS---IMKAYLKRRHELKLVLFLVDGS 304 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIP 190 + D +V + + + + +LTK+DK++ P T + + ++ + P IP Sbjct: 305 CDPQDDDYEVLKYFREVGMPHLFILTKMDKVNVPQTPAQIMNFRQF----FDLKSPLPIP 360 Query: 191 TSSVKRKGIEVLRKAILE 208 S + + + KAIL+ Sbjct: 361 FSKLGGGDLGSIWKAILD 378 >gi|310794854|gb|EFQ30315.1| ribosome biogenesis GTP-binding protein YsxC [Glomerella graminicola M1.001] Length = 462 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 69/148 (46%), Gaps = 21/148 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA-- 87 PEI G SN GKSS IN L N +LA+ S+ G+T +N + + L P A Sbjct: 189 PEICVVGASNCGKSSFINALTNSASLAKVSDRAGKTVSMNAYGVGTLAGLPFRTPVAAEG 248 Query: 88 --------------LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD PGYGYA + + WG IV YL++R+ LR V LL+ Sbjct: 249 GGATKEVQPEHGLVLVDTPGYGYA-----SHEEWGREIVEYLNKRTMLRGVILLLSSEKK 303 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 V + D + L +V TK+DK Sbjct: 304 VSEKDAQIVKLLADAGRPVMLVFTKMDK 331 >gi|30350184|gb|AAP31492.1| conserved hypothetical GTP-binding protein [Western X phytoplasma] Length = 195 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 16/184 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ GRSNVGKSS IN L N+K LA S PG+T +N+F+ D + LVD Sbjct: 24 EVFLMGRSNVGKSSFINALTNKKKLALFSKTPGKTTTVNYFLLND---------SFYLVD 74 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PGYGY++ K S +I +L ++ ++ +ID + G ++D D++ L + + Sbjct: 75 SPGYGYSKRNKTFKQSVFPMINNFLQNNYFVKIIFQIIDFKVGPTKMDLDIYHNLREYNL 134 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT---SSVKRKGIEVLRKAIL 207 ++L K DK+ +++ I+ A E IP S + G+ + I Sbjct: 135 PVFLILNKKDKVLKNQVINQMQR----IKKEFGAFEENIPMFLLSCKNKDGLNEIVNLIY 190 Query: 208 ETIN 211 + IN Sbjct: 191 DKIN 194 >gi|261329362|emb|CBH12343.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 921 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 19/197 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFS---NLKNN-- 82 EI G++ GKSSL+N L+ ++ +A+TS+ P T+ L+F+ P++ N+K N Sbjct: 243 EIVLVGKACAGKSSLLNALLGQQ-VAKTSSTPNTTRKLSFYQSVSPEEMQRYLNVKGNGL 301 Query: 83 --LPAMAL----VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LP L VD+PG+G ++ D L YL R ++ + L IDC G+ + Sbjct: 302 VKLPGGGLQLTFVDVPGFGLEGMSEQWRDKAIELTDAYLGVRRSVNTLLLCIDCERGLTK 361 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPTS 192 +D F++L+ + +VLTK D + + + + +I R Y P +IPTS Sbjct: 362 VDLRYFTWLENLHGVFFVVLTKCDSVPHSRVCSVMRQIYSVITKNRRKYRKVFPFIIPTS 421 Query: 193 SVKRKGIEVLRKAILET 209 + IE+LR I ET Sbjct: 422 ANDGTNIEMLRGLIAET 438 >gi|6841492|gb|AAF29099.1|AF161484_1 HSPC135 [Homo sapiens] Length = 307 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/185 (36%), Positives = 95/185 (51%), Gaps = 21/185 (11%) Query: 24 LPKAG-PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR--TQHLNFF-VPKDFSNL 79 LP G P F +SNVGKSSLI + + L S +P TQ FF V K F+ Sbjct: 128 LPLPGRPARGVFYRQSNVGKSSLIKLYFHWP-LRLKSESPKNQDTQENEFFKVGKHFT-- 184 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 +VDMPGYG+ RAP+ VD ++ YL ER L+ +LL+D G+++ D Sbjct: 185 --------VVDMPGYGF-RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVGIQKTDN 231 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ A+ Y IVLTKIDK S ++ L+ K++ P++ P S+V G Sbjct: 232 IAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNMKTQGCFPQLFPVSAVTFSG 291 Query: 199 IEVLR 203 I +LR Sbjct: 292 IHLLR 296 >gi|71662732|ref|XP_818368.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70883616|gb|EAN96517.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 906 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 21/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFS---NLKNN-- 82 EI G++ GKSSL+N L+ + LA+TS+ P T+ ++F+ P++ N+K N Sbjct: 241 EIVLVGKACAGKSSLLNALLG-QTLAKTSSTPNTTRQISFYQSVSPEEMQRYLNVKGNGL 299 Query: 83 --LPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LP + VD+PG+G D L YL R ++ V IDC G+ + Sbjct: 300 VKLPGGGVQLTFVDVPGFGIEGMSDHWRDKAIALTDAYLGVRRSVNTVLFCIDCERGLTK 359 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-----TKYLIRNYPTAHPEVIPT 191 +D F++L+ + IVLTK D + + + + TKY R Y P ++PT Sbjct: 360 VDLRYFTWLENLHGVFFIVLTKCDSVPHSRVCSVMRQIYATITKYR-RKYRKVFPFILPT 418 Query: 192 SSVKRKGIEVLRKAILET 209 S+ +E+LR I ET Sbjct: 419 SAKDGTNVELLRGLIAET 436 >gi|223997822|ref|XP_002288584.1| GTP binding protein [Thalassiosira pseudonana CCMP1335] gi|220975692|gb|EED94020.1| GTP binding protein [Thalassiosira pseudonana CCMP1335] Length = 483 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 74/147 (50%), Gaps = 7/147 (4%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKN--LARTSNAPGRTQHLNFFVPKDFSNLK 80 L P G PE+AF GRSNVGKSSL+N LV++ AR PG T +N + S + Sbjct: 158 LPPSLGVPEVAFLGRSNVGKSSLLNRLVSKAGGETARVGKTPGATASVNLYALLGPSKSR 217 Query: 81 N-----NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + P + D+PG+GYA+ K+ +S RYL +R L LL+D R Sbjct: 218 DKGGGQGKPILGFADLPGFGYAKLNKETKESVEEAAERYLGKRRELALGILLVDSRRIPN 277 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKL 162 D+ V + L V +V TK DKL Sbjct: 278 TDDRAVLAALFDMGVPLIVVATKSDKL 304 >gi|72391184|ref|XP_845886.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62175518|gb|AAX69658.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70802422|gb|AAZ12327.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 900 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 19/197 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP------KDFSNLKNN-- 82 EI G++ GKSSL+N L+ ++ +A+TS+ P T+ L+F+ + + N+K N Sbjct: 222 EIVLVGKACAGKSSLLNALLGQQ-VAKTSSTPNTTRKLSFYQSVSPEQMQRYLNVKGNGL 280 Query: 83 --LPAMAL----VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LP L VD+PG+G ++ D L YL R ++ + L IDC G+ + Sbjct: 281 VKLPGGGLQLTFVDVPGFGLEGMSEQWRDKAIELTDAYLGVRRSVNTLLLCIDCERGLTK 340 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPTS 192 +D F++L+ + +VLTK D + + + + +I R Y P +IPTS Sbjct: 341 VDLRYFTWLENLHGVFFVVLTKCDSVPHSRVCSVMRQIYSVITKNRRKYRKVFPFIIPTS 400 Query: 193 SVKRKGIEVLRKAILET 209 + IE+LR I ET Sbjct: 401 ANDGTNIEMLRGLIAET 417 >gi|322829796|gb|EFZ33067.1| hypothetical protein TCSYLVIO_575 [Trypanosoma cruzi] Length = 885 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 21/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFS---NLKNN-- 82 EI G++ GKSSL+N L+ + LA+TS+ P T+ ++F+ P++ N+K N Sbjct: 220 EIVLVGKACAGKSSLLNALLG-QTLAKTSSTPNTTRQISFYQSVSPEEMQRYLNVKGNGL 278 Query: 83 --LPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LP + VD+PG+G D L YL R ++ V IDC G+ + Sbjct: 279 VKLPGGGVQLTFVDVPGFGIEGMSDHWRDKAIALTDAYLGVRRSVNTVLFCIDCERGLTK 338 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-----TKYLIRNYPTAHPEVIPT 191 +D F++L+ + IVLTK D + + + + TKY R Y P ++PT Sbjct: 339 VDLRYFNWLENLHGVFFIVLTKCDSVPHSRVCSVMRQIYSTITKYR-RKYRKVFPFILPT 397 Query: 192 SSVKRKGIEVLRKAILET 209 S+ +E+LR I ET Sbjct: 398 SAKDGTNVELLRGLIAET 415 >gi|71651554|ref|XP_814453.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70879425|gb|EAN92602.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 908 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 21/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---VPKDFS---NLKNN-- 82 EI G++ GKSSL+N L+ + LA+TS+ P T+ ++F+ P++ N+K N Sbjct: 241 EIVLVGKACAGKSSLLNALLG-QTLAKTSSTPNTTRQISFYQSVSPEEMQRYLNVKGNGL 299 Query: 83 --LPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LP + VD+PG+G D L YL R ++ V +DC G+ + Sbjct: 300 VKLPGGGVQLTFVDVPGFGIEGMSDHWRDKAIALTDAYLGVRRSVNTVLFCVDCERGLTK 359 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-----TKYLIRNYPTAHPEVIPT 191 +D F++L+ + IVLTK D + + + + TKY R Y P ++PT Sbjct: 360 VDLRYFTWLENLHGVFFIVLTKCDSVPHSRVCSVMRQIYATITKYR-RKYRKVFPFILPT 418 Query: 192 SSVKRKGIEVLRKAILET 209 S+ +E+LR I ET Sbjct: 419 SAKDGTNVELLRGLIAET 436 >gi|157869363|ref|XP_001683233.1| hypothetical protein [Leishmania major strain Friedlin] gi|68224117|emb|CAJ04333.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 975 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ +++A+TS+ P T+ ++F F K+ N Sbjct: 217 EVAFAGRACAGKSSLLNALLG-QHVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 275 Query: 80 KNNLPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP + VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 276 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 335 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI R Y P +IP Sbjct: 336 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRRKYRKVFPFIIPV 395 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 396 SAKDGTNIELLRGLITET 413 >gi|157869343|ref|XP_001683223.1| hypothetical protein [Leishmania major strain Friedlin] gi|68224107|emb|CAJ04275.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 1166 Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ +++A+TS+ P T+ ++F F K+ N Sbjct: 411 EVAFAGRACAGKSSLLNALLG-QHVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 469 Query: 80 KNNLPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP + VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 470 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 529 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI R Y P +IP Sbjct: 530 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRRKYRKVFPFIIPV 589 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 590 SAKDGTNIELLRGLITET 607 >gi|308808330|ref|XP_003081475.1| Predicted GTPase (ISS) [Ostreococcus tauri] gi|116059938|emb|CAL55997.1| Predicted GTPase (ISS) [Ostreococcus tauri] Length = 396 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 82/184 (44%), Gaps = 11/184 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+A GRSNVGKSSL+N++ A S PG T +N + LVD Sbjct: 126 EVALIGRSNVGKSSLLNLVTFGAGAAVVSAKPGTTCSMNHYSVDGR---------WRLVD 176 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA A +++W Y + R L V LLID D+ ++L + Sbjct: 177 LPGYGYAEAEPGEIEAWDAFTKEYFATRENLAGVLLLIDASVPPTANDEKYANWLIENET 236 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVLRKAILE 208 + IV TK D+ P K + + H P +I TSSV +G + + K I Sbjct: 237 PFTIVFTKCDRDKPKGPSVEDNKAAFRAKLEERWHRLPSMISTSSVTTQGRDEVLKFISS 296 Query: 209 TINY 212 I Y Sbjct: 297 LIVY 300 >gi|260812217|ref|XP_002600817.1| hypothetical protein BRAFLDRAFT_263736 [Branchiostoma floridae] gi|229286107|gb|EEN56829.1| hypothetical protein BRAFLDRAFT_263736 [Branchiostoma floridae] Length = 174 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 IA GRSNVGKS+L+ L + +TS PG T+ NFF AM LV Sbjct: 3 IAIMGRSNVGKSTLLQCLFREVPDLVVKTSKTPGHTKMANFFRVGS---------AMTLV 53 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYGY R P V ++ YL +R LR ++D G+ D +++ Sbjct: 54 DMPGYGY-RQPADFVH----IVEDYLLQRKNLRMAVFMVDGAAGISSWDTVAIEMIEEFK 108 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH-PEVIPTSSVKRKGIEVLR 203 Y +V+TKIDK+S + + + +I+ A P+V S + G+ +L+ Sbjct: 109 RPYVLVMTKIDKVSHHVLVKNVLAVRQVIKERTKACLPQVFLVSGMTGDGVPLLQ 163 >gi|321309633|ref|YP_004191962.1| GTP binding protein EngB [Mycoplasma haemofelis str. Langford 1] gi|319801477|emb|CBY92123.1| GTP binding protein EngB [Mycoplasma haemofelis str. Langford 1] Length = 183 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 95/186 (51%), Gaps = 17/186 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P PE G SN GKS+LIN L K +A+TS +PG+T+ +NF+ DF Sbjct: 15 PMHSMPEFFLIGPSNAGKSTLINSLAKAK-IAKTSKSPGKTRTINFY---DFDKF----- 65 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVDMPGYG+ R ++ +I YL+ER L V + I HG+ Q D +V ++ Sbjct: 66 --CLVDMPGYGFDRKGREG--DLLKVINEYLTERPNLIGV-VQICSPHGLSQNDLEVKNY 120 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +Y ++L KIDKLS +Q L K K ++ ++ S + + VL + Sbjct: 121 LFSRFHNYLLLLNKIDKLS--NSQRLLAK-KQIVTESQLQEGNILLISGKTSENLNVLVR 177 Query: 205 AILETI 210 ++ I Sbjct: 178 TLISWI 183 >gi|167947351|ref|ZP_02534425.1| GTPase EngB [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 86 Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 9/85 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ ++ P E+AF+GRSN GKSS +N+L N+K+LARTS PGRTQ LNFF Sbjct: 10 FLKSAAKLSQAPADQGIEVAFAGRSNAGKSSALNLLCNQKSLARTSKTPGRTQLLNFFGL 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYAR 98 + LVD+PGYGYA+ Sbjct: 70 DE---------QRRLVDLPGYGYAK 85 >gi|322491776|emb|CBZ27049.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 934 Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ + +A+TS+ P T+ ++F F K+ N Sbjct: 203 EVAFAGRACAGKSSLLNALLG-QYVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 261 Query: 80 KNNLPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP + VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 262 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 321 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI R Y P +IP Sbjct: 322 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRRKYRKVFPFIIPV 381 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 382 SAKDGTNIELLRGLITET 399 >gi|261331731|emb|CBH14725.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 634 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 21/203 (10%) Query: 13 IFLRG------VPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 IF RG I +P + P PE+A +GR GKSSL+ L SN R Sbjct: 95 IFSRGHKHVCCATNISFVPDSNPAMPEVALAGRGQCGKSSLLRSLFRSSREVGRSNVKLR 154 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 +NFF N+ + +VD+PG+G P + L+ ++ R L+ + Sbjct: 155 RDAMNFF------NVGGGV--FNIVDLPGFGGTSVPWSTLLQHAVLLRNFVRCRPNLKML 206 Query: 125 YLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET--LEKTKYLIRN 180 Y +D RHGV D D+ FL K+ ++ IV+TK D+L T ++ LE + + Sbjct: 207 YYCMDVHYRHGVYIQDLDLLRFLSKEVPNFTIVVTKGDQLDTTKSRNVFRLEDIRKELLF 266 Query: 181 YPTAHPEVIPTSSVKRKGIEVLR 203 + HP V+ TS+ G++ LR Sbjct: 267 HDITHP-VLVTSAYHMGGVDALR 288 >gi|296226264|ref|XP_002758874.1| PREDICTED: GTP-binding protein 8-like [Callithrix jacchus] Length = 254 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 23/155 (14%) Query: 57 RTSNAP------GRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 R +AP G T+ +NFF V K F+ +VDMPGYGY RAP + + Sbjct: 101 RKDHAPDLPRPEGHTKKMNFFKVGKHFT----------VVDMPGYGY-RAP----EDFAD 145 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQ 168 ++ YL ERS LR +LL+D G+++ D ++ A+ Y IVLTKIDK S + Sbjct: 146 MVETYLKERSNLRRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLK 205 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + LE KY+ P++ S+V GI +LR Sbjct: 206 QVLEIQKYVNTKTQGCFPQLFAVSTVTFSGIHLLR 240 >gi|322491766|emb|CBZ27039.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1134 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ + +A+TS+ P T+ ++F F K+ N Sbjct: 403 EVAFAGRACAGKSSLLNALLG-QYVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 461 Query: 80 KNNLPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP + VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 462 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 521 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI R Y P +IP Sbjct: 522 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRRKYRKVFPFIIPV 581 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 582 SAKDGTNIELLRGLITET 599 >gi|109033061|ref|XP_001105772.1| PREDICTED: GTP-binding protein 8-like isoform 1 [Macaca mulatta] Length = 251 Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 82/158 (51%), Gaps = 23/158 (14%) Query: 57 RTSNAP------GRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 R +AP G T+ +NFF V K F+ +VDMPGYGY RAP+ VD Sbjct: 101 RIDHAPDLPRPEGHTKKMNFFKVGKHFT----------VVDMPGYGY-RAPEDFVD---- 145 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQ 168 ++ YL ER L+ +LL+D G+++ D ++ A+ Y IVLTKIDK S + Sbjct: 146 MVETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLK 205 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + L+ K++ P++ P SSV GI +LR I Sbjct: 206 QVLQIQKFVNTKTQGCFPQLFPVSSVTFSGIHLLRSFI 243 >gi|322710804|gb|EFZ02378.1| GTP binding protein (EngB), putative [Metarhizium anisopliae ARSEF 23] Length = 360 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 20/144 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF------------VPKDFS 77 PEI G SNVGKS+ +N LV + AR S PGRT +N + VPK Sbjct: 123 PEIVVLGSSNVGKSTFLNALVGQPKAARVSQKPGRTTLMNAYGVGPLPKIPRGLVPKGMP 182 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 +++L +VD PGYG+ K+ SWG +++YL R TLR +L+ + Sbjct: 183 PPRHSL---VVVDTPGYGF-----KSQSSWGDAVIKYLQARRTLRGAVVLLSSEKKLLPE 234 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDK 161 D+ + L + +VLTK DK Sbjct: 235 DKWMLRTLAEANTRTVVVLTKADK 258 >gi|71745802|ref|XP_827531.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70831696|gb|EAN77201.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 634 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 21/203 (10%) Query: 13 IFLRG------VPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 IF RG I +P P PE+A +GR GKSSL+ L SN R Sbjct: 95 IFSRGHKHVCCATNISFVPDGNPAMPEVALAGRGQCGKSSLLRSLFRSSREVGRSNVKLR 154 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 +NFF N+ + +VD+PG+G P + L+ ++ R L+ + Sbjct: 155 RDAMNFF------NVGGGV--FNIVDLPGFGGTSVPWSTLLQHAVLLRNFVRCRPNLKML 206 Query: 125 YLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET--LEKTKYLIRN 180 Y +D RHGV D D+ FL K+ ++ IV+TK D+L T ++ LE + + Sbjct: 207 YYCMDVHYRHGVYIQDLDLLRFLSKEVPNFTIVVTKGDQLDTTKSRNVFRLEDIRKELLF 266 Query: 181 YPTAHPEVIPTSSVKRKGIEVLR 203 + HP V+ TS+ G++ LR Sbjct: 267 HDITHP-VLVTSAYHMGGVDALR 288 >gi|237751796|ref|ZP_04582276.1| GTP-binding protein [Helicobacter bilis ATCC 43879] gi|229373162|gb|EEO23553.1| GTP-binding protein [Helicobacter bilis ATCC 43879] Length = 203 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 36/165 (21%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK-DFSNLKNNLP------AMA- 87 GRSNVGKSS+IN+L+N K LA++S+ PG+T+ +NFF + + K+++P AM Sbjct: 3 GRSNVGKSSIINLLLNHK-LAKSSSTPGKTKLINFFSTTWELTTNKDSMPNTHESIAMQC 61 Query: 88 ----------------------LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 +D PG+GYA+ K W + ++ +R +++ Sbjct: 62 KTDSMQNNQDLLQTESMRIPLIFIDFPGFGYAKVSKDTKKVWDKHLTDFIYKRQSIKLFC 121 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQ-----IVLTKIDKLSPT 165 LID RH ID ++ FL K S Q + TK DKL+ + Sbjct: 122 HLIDSRHTNLAIDTEIERFLQKIVESRQDCKLLQIYTKADKLNKS 166 >gi|320583814|gb|EFW98027.1| GTPBP8, GTP-binding protein 8 (putative) [Pichia angusta DL-1] Length = 278 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 27/195 (13%) Query: 30 PEIAFSGRSNVGKSSLINILV--NRKN---LARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PE+ GR NVGKSSL+N L+ NR++ A+ + G T LNF+ N Sbjct: 55 PEVILLGRCNVGKSSLVNALMSNNRQSATPYAKVKQSAGYTPCLNFY---------NVGG 105 Query: 85 AMALVDMPGYGYARAPKKNVDSWGG-LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD PGYG P W G L ++YL+ER LR +L+++ G+ + D+ + Sbjct: 106 LFRLVDSPGYGVKGKP------WQGELTMQYLAERRELRNCFLILNGDIGLNKYDELILE 159 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTA-QETLEKTKYLIRNYPTAHPEVIPTSSV-----KRK 197 L + V + I+ KIDK+ + Q E I N P + +S+ +R Sbjct: 160 ALVEMGVQFDIIFNKIDKIKNNSRIQHYEELISTSILNDLKIKPRIYFANSIESDLKQRT 219 Query: 198 GIEVLRKAILETINY 212 GI +R IL++ Y Sbjct: 220 GINEIRYGILQSCGY 234 >gi|124516596|gb|EAY58104.1| GTP-binding protein [Leptospirillum rubarum] Length = 212 Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 12/165 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKSSLIN L NR +LA+ PG+T +NL + +D Sbjct: 35 IGFVGRSNVGKSSLINKLANRHHLAKVGRTPGKTT---------LANLYSLDKGGYFIDF 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYGY R K+ L + + +L+ + LL+D R + +D + +L+ Sbjct: 86 PGYGYMRRDKETAQKARSLSTLLVEKIPSLQRILLLVDIRRDILPVDVEALLWLENLGRP 145 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSS 193 IVL+K D ++ Q + K L+R N T+ P V+ T + Sbjct: 146 VTIVLSKSDLVNRNDVQRVQKLWKDLLRERMNQVTSPPLVLSTKT 190 >gi|241950009|ref|XP_002417727.1| conserved hypothetical protein [Candida dubliniensis CD36] gi|223641065|emb|CAX45439.1| conserved hypothetical protein [Candida dubliniensis CD36] Length = 363 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 52/140 (37%), Positives = 78/140 (55%), Gaps = 21/140 (15%) Query: 30 PEIAFSGRSNVGKSSLIN-ILVNRKN------LARTSNAPGRTQHLNFFVPKDFSNLKNN 82 PE+ F G +NVGKSSLIN +LVN K+ LA S G T+ +N F +FS Sbjct: 159 PEVLFMGHTNVGKSSLINSLLVNNKSISGPSQLAYVSARAGFTKTINCF---NFSK---- 211 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + ++D PGYG K+ G ++V Y+S+R L+ VY+LID G ++ D +F Sbjct: 212 --KLRIIDSPGYGQYGDLKQ-----GRVVVDYISKRHQLKKVYVLIDSVEGFREEDSYIF 264 Query: 143 SFLDKKAVSYQIVLTKIDKL 162 + L + V + I+ TK+D + Sbjct: 265 NMLIDEGVPFDIIFTKVDSV 284 >gi|322499037|emb|CBZ34109.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 977 Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ +++A+TS+ P T+ ++F F K+ N Sbjct: 220 EVAFAGRACAGKSSLLNALLG-QHVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 278 Query: 80 KNNLPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP + VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 279 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 338 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI Y P +IP Sbjct: 339 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRHKYRKVFPFIIPV 398 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 399 SAKDGTNIELLRGLITET 416 >gi|146086607|ref|XP_001465591.1| hypothetical protein [Leishmania infantum JPCM5] gi|134069690|emb|CAM68014.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 977 Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ +++A+TS+ P T+ ++F F K+ N Sbjct: 220 EVAFAGRACAGKSSLLNALLG-QHVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 278 Query: 80 KNNLPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP + VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 279 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 338 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI Y P +IP Sbjct: 339 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRHKYRKVFPFIIPV 398 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 399 SAKDGTNIELLRGLITET 416 >gi|322698814|gb|EFY90581.1| GTP binding protein (EngB) [Metarhizium acridum CQMa 102] Length = 322 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 18/143 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-------VPKDFSNLKNN 82 PEI G SNVGKS+ +N LV + AR S PGRT +N + +P+D + Sbjct: 85 PEIVVLGSSNVGKSTFLNALVGQSKAARVSQKPGRTTLMNAYGVGPLPKIPRDL--VPKG 142 Query: 83 LP----AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 +P ++ +VD PGYG+ K+ SWG I++YL R LR +L+ + D Sbjct: 143 MPPPRHSLVVVDTPGYGF-----KSQASWGDAIMKYLQARRMLRGAVVLLSSEKRLLPED 197 Query: 139 QDVFSFLDKKAVSYQIVLTKIDK 161 + + L + +VLTK DK Sbjct: 198 RWMLRTLAEANTRTVVVLTKADK 220 >gi|45190512|ref|NP_984766.1| AEL095Cp [Ashbya gossypii ATCC 10895] gi|44983454|gb|AAS52590.1| AEL095Cp [Ashbya gossypii ATCC 10895] Length = 358 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 24/192 (12%) Query: 30 PEIAFSGRSNVGKSSLINIL------VNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 PEI F GRSN GKS+L+N L V A TS G T+ L + N+ N L Sbjct: 168 PEIIFLGRSNAGKSTLLNNLTTNFKQVQLNRHATTSKKAGHTRALYCY------NVGNRL 221 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD PGYG + G ++Y+ ER LR ++LI + G + D + Sbjct: 222 ---RLVDSPGYGVM-----STQQQGECTMQYIRERKQLRRCFMLISAKDGFTKTDYGMLE 273 Query: 144 FLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYL---IRNYPTAHPEVIPTSSVKRKGI 199 FL ++++++ TK+DK+ T ++++ + L IR V+ + KR GI Sbjct: 274 FLMNYGIAFEVIFTKMDKVRDVKTLRDSISTSGILDAPIRPRLMFLNSVVNKAYPKRLGI 333 Query: 200 EVLRKAILETIN 211 LR+ I E N Sbjct: 334 AHLRQTIFEACN 345 >gi|167527203|ref|XP_001747934.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773683|gb|EDQ87321.1| predicted protein [Monosiga brevicollis MX1] Length = 307 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 12/108 (11%) Query: 23 LLPKAGPP--EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 LP + P E+AF+GRSNVGKS+LIN+L + + AR+ N PG TQ +NF+ D + + Sbjct: 178 FLPASDKPVFEVAFAGRSNVGKSTLINLLT-KSSPARSRNKPGVTQSINFYRVTDQARV- 235 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 VD PGYG+A A + W I YL +R+ L VYL++ Sbjct: 236 --------VDFPGYGFAFANEAKQSLWQDAIRAYLQDRTELELVYLVL 275 >gi|156089105|ref|XP_001611959.1| GTPase family protein protein [Babesia bovis] gi|154799213|gb|EDO08391.1| GTPase family protein protein [Babesia bovis] Length = 444 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 12/164 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILV----NRK---NLARTSNAP 62 S F+ +LP PEI GRSNVGKSS IN ++ RK ++A S P Sbjct: 146 STLEFIGSYIHTAILPSLALPEICLVGRSNVGKSSFINTMMTYMKTRKKSCDMAFVSKTP 205 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP-KKNVDSWGGLIVRYLSERSTL 121 G T+ +N F D +++ D+PGYG+ + ++ V + + YL R+ L Sbjct: 206 GYTKCINIFKAVD----TKGRDVLSIADLPGYGFVKIKNRETVHAMNSALRAYLQRRNEL 261 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 + + LID + D +V L + + IV TK+DK++ T Sbjct: 262 KFIIFLIDGSLQPQSSDMEVHEMLKSMGIPFIIVCTKMDKVAQT 305 >gi|332225397|ref|XP_003261866.1| PREDICTED: GTP-binding protein 8-like isoform 2 [Nomascus leucogenys] Length = 251 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 23/155 (14%) Query: 57 RTSNAP------GRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 R +AP G T+ +NFF V K F+ +VDMPGYGY RAP+ VD Sbjct: 101 RIDHAPDLPRPEGHTKKMNFFKVGKHFT----------VVDMPGYGY-RAPEDFVD---- 145 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQ 168 ++ YL ER L+ +LL+D G+++ D ++ A+ Y IVLTKIDK S + Sbjct: 146 MVETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLK 205 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + L+ K++ P++ P S+V GI +LR Sbjct: 206 QVLQIQKFVNTKTQGCFPQLFPVSAVAFSGIHLLR 240 >gi|148665633|gb|EDK98049.1| GTP-binding protein 8 (putative), isoform CRA_b [Mus musculus] Length = 243 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 23/155 (14%) Query: 57 RTSNAP------GRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 R +AP G T+ +NFF V K F+ LVDMPGYGY RAP+ VD Sbjct: 93 RLDHAPSLQQPEGHTKKMNFFKVGKHFT----------LVDMPGYGY-RAPEDFVD---- 137 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT-TAQ 168 ++ YL ER+ L+ +LL+D G+ ++D ++ A+ Y ++LTKIDK S + Sbjct: 138 MVETYLKERNNLKRTFLLVDSVVGITKLDNIAIEMCEEFALPYVMILTKIDKSSKGYLLK 197 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + L+ K++ P++ P S+V G+ +L+ Sbjct: 198 QVLQIQKFVNTQTQGCFPQLFPISAVTNSGVHLLK 232 >gi|114588506|ref|XP_001156766.1| PREDICTED: GTP-binding protein 8 isoform 1 [Pan troglodytes] Length = 251 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 23/155 (14%) Query: 57 RTSNAP------GRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 R +AP G T+ +NFF V K F+ +VDMPGYG+ RAP+ VD Sbjct: 101 RIDHAPDLPRPEGHTKKMNFFKVGKHFT----------VVDMPGYGF-RAPEDFVD---- 145 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQ 168 ++ YL ER L+ +LL+D G+++ D ++ A+ Y IVLTKIDK S + Sbjct: 146 MVETYLKERRNLKRTFLLVDSVVGIQKTDNTAIEMCEEFALPYVIVLTKIDKSSKGHLLK 205 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + L+ K++ P++ P S+V GI +LR Sbjct: 206 QVLQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLR 240 >gi|50312027|ref|XP_456045.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49645181|emb|CAG98753.1| KLLA0F21626p [Kluyveromyces lactis] Length = 359 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 28/191 (14%) Query: 30 PEIAFSGRSNVGKSSLINIL---VNRKNLARTSNA---PGRTQHLNFFVPKDFSNLKNNL 83 PEIAF GR N GKS+L+N + V R +L +NA G T+ +N F N Sbjct: 170 PEIAFLGRCNSGKSTLLNSVTTEVTRNSLNEYANASKKAGFTKTINCF---------NVG 220 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D PGYG K G + + YL +R LR +LLI +G + D + Sbjct: 221 GKFRIIDTPGYG-----TKGTVEQGKVTMDYLHKRRELRRSFLLISANNGFSEYDAQMID 275 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------KRK 197 L + ++IV TK+D + E++ + ++R PT+ P I +S+ KR Sbjct: 276 LLVNDGIPFEIVFTKMDTIKDMAQVESIIEESNVLR-LPTS-PRFIFLNSMTNKRCQKRF 333 Query: 198 GIEVLRKAILE 208 G++VLR +LE Sbjct: 334 GLDVLRYVVLE 344 >gi|224010369|ref|XP_002294142.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970159|gb|EED88497.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 536 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 68/227 (29%), Positives = 92/227 (40%), Gaps = 91/227 (40%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVN----------------RKNLARTSNAPGRTQHL 68 P G PE+AF GRSN GKSSLIN L + LARTS PGRTQ + Sbjct: 199 PTNGTPEVAFLGRSNTGKSSLINALSSLILRGGGGASKHIGSGGGELARTSKRPGRTQTI 258 Query: 69 NFF--VPK---DFSNLKNNLP---------------------AMALVDMPGYGYARAPKK 102 N+F +P D SN ++LP + LVD+PG+GYA AP + Sbjct: 259 NYFGLIPNNAVDSSNSSSSLPFTSTSAKAGDKANKHPSINQSKLFLVDLPGFGYASAPDE 318 Query: 103 NVDSWGGLIVRYLSERST------------------------------------------ 120 +VD+W ++L R++ Sbjct: 319 SVDAWQQRTQQFLVSRASTPEEVGKGGGIQPWPNANKSEGKRGTASNNNNNNNSRRIVSR 378 Query: 121 ------LRCVYLLIDCRHGVKQ-IDQDVFSFLDKKAVSYQIVLTKID 160 L+ +YLL+D R ID V + D ++ Y IVLTK+D Sbjct: 379 DTSSPPLKRLYLLVDSRLPEPTLIDLSVMGWCDDYSIPYTIVLTKVD 425 >gi|229087034|ref|ZP_04219188.1| GTP-binding protein YihA [Bacillus cereus Rock3-44] gi|228696297|gb|EEL49128.1| GTP-binding protein YihA [Bacillus cereus Rock3-44] Length = 149 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 72/150 (48%), Gaps = 11/150 (7%) Query: 57 RTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS 116 R S+ PG+TQ LNFF L N + M VD+PGYGYA+ K +WG +I Y + Sbjct: 2 RISSKPGKTQTLNFF-------LINEM--MHFVDVPGYGYAKVSKTERAAWGKMIETYFT 52 Query: 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 R L L++D RH D ++ FL + I+ TK DK+ Q+ L+ K Sbjct: 53 TREQLDAAVLVVDLRHPPTNDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVKE 112 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + A EV+ SS G E KAI Sbjct: 113 TLD--VEAGDEVVLFSSETGLGKEEAWKAI 140 >gi|56549687|ref|NP_612494.1| GTP-binding protein 8 isoform 2 [Homo sapiens] Length = 251 Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/155 (34%), Positives = 81/155 (52%), Gaps = 23/155 (14%) Query: 57 RTSNAP------GRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 R +AP G T+ +NFF V K F+ +VDMPGYG+ RAP+ VD Sbjct: 101 RIDHAPDLPRPEGHTKKMNFFKVGKHFT----------VVDMPGYGF-RAPEDFVD---- 145 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQ 168 ++ YL ER L+ +LL+D G+++ D ++ A+ Y IVLTKIDK S + Sbjct: 146 MVETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLK 205 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + L+ K++ P++ P S+V GI +LR Sbjct: 206 QVLQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLR 240 >gi|194222846|ref|XP_001503003.2| PREDICTED: similar to GTP-binding protein 8 [Equus caballus] Length = 258 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 23/155 (14%) Query: 57 RTSNAP------GRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 R +AP G T+ +NFF V K F+ LVDMPGYGY RAP+ VD Sbjct: 101 RLDHAPALPRPEGHTKKMNFFKVGKYFT----------LVDMPGYGY-RAPEDFVD---- 145 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQ 168 ++ YL ER L +LL+D G+++ D ++ A+ Y +VLTKIDK S + Sbjct: 146 MVETYLKERKNLMRTFLLVDSVVGIQKTDNIAVEMCEEFALPYVMVLTKIDKSSKGHLLK 205 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + L+ K++ P++ P S+V GI +LR Sbjct: 206 QVLQIQKFVDTKTQGCFPQLFPVSAVTYSGIHLLR 240 >gi|238878445|gb|EEQ42083.1| conserved hypothetical protein [Candida albicans WO-1] Length = 363 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 21/140 (15%) Query: 30 PEIAFSGRSNVGKSSLIN-ILVNRKN------LARTSNAPGRTQHLNFFVPKDFSNLKNN 82 PE+ F G +NVGKSSLIN +LV K+ LA S G T+ +N F +FS Sbjct: 159 PEVLFMGHTNVGKSSLINGLLVKNKSITGPTQLAYVSARAGFTKTINCF---NFSK---- 211 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + ++D PGYG K+ G ++V Y+S R L+ VY+LID G ++ D +F Sbjct: 212 --KLRIIDSPGYGEYGDLKQ-----GKVVVDYISRRHQLKKVYVLIDSVEGFREEDSYIF 264 Query: 143 SFLDKKAVSYQIVLTKIDKL 162 + L + V + I+ TK+D + Sbjct: 265 NLLIDEGVPFDIIFTKVDNV 284 >gi|68486091|ref|XP_713062.1| hypothetical protein CaO19.8756 [Candida albicans SC5314] gi|68486160|ref|XP_713030.1| hypothetical protein CaO19.1163 [Candida albicans SC5314] gi|46434496|gb|EAK93904.1| hypothetical protein CaO19.1163 [Candida albicans SC5314] gi|46434535|gb|EAK93942.1| hypothetical protein CaO19.8756 [Candida albicans SC5314] Length = 363 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 21/140 (15%) Query: 30 PEIAFSGRSNVGKSSLIN-ILVNRKN------LARTSNAPGRTQHLNFFVPKDFSNLKNN 82 PE+ F G +NVGKSSLIN +LV K+ LA S G T+ +N F +FS Sbjct: 159 PEVLFMGHTNVGKSSLINGLLVKNKSITGPTQLAYVSARAGFTKTINCF---NFSK---- 211 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + ++D PGYG K+ G ++V Y+S R L+ VY+LID G ++ D +F Sbjct: 212 --KLRIIDSPGYGEYGDLKQ-----GKVVVDYISRRHQLKKVYVLIDSVEGFREEDSYIF 264 Query: 143 SFLDKKAVSYQIVLTKIDKL 162 + L + V + I+ TK+D + Sbjct: 265 NLLIDEGVPFDIIFTKVDNV 284 >gi|20093647|ref|NP_613494.1| GTP-binding protein [Methanopyrus kandleri AV19] gi|25452940|sp|Q8TYT5|ENGB_METKA RecName: Full=Probable GTP-binding protein EngB gi|19886519|gb|AAM01424.1| Predicted GTPase of the YihA family [Methanopyrus kandleri AV19] Length = 203 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 21/165 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PEI GRSNVGKSSLI + R PG T+ F L L LV Sbjct: 2 PEIVLVGRSNVGKSSLIRAITRGAADVRVGKRPGVTRK------PVFHELDGEL---VLV 52 Query: 90 DMPGYGYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDC-----------RHGVKQI 137 DMPG+G+ P++ + LIVRYL E+ + ++D R G I Sbjct: 53 DMPGFGFMSGVPRRYQERVKDLIVRYLEEKDNILFAIHVVDAKALPEIAERWERRGEIPI 112 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 D+++F FL++ + + KIDK+ P +E ++ + +P Sbjct: 113 DREMFQFLNEVGLDPIVAANKIDKIKPIEFEEHMDAVAEALGLFP 157 >gi|158260245|dbj|BAF82300.1| unnamed protein product [Homo sapiens] Length = 251 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 17/143 (11%) Query: 63 GRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 G T+ +NFF V K F+ +VDMPGYG+ RAP+ VD ++ YL ER L Sbjct: 113 GHTKKMNFFKVGKHFT----------VVDMPGYGF-RAPEDFVD----MVETYLKERRNL 157 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRN 180 + +LL+D G+++ D ++ A+ Y IVLTKIDK S ++ L+ K++ Sbjct: 158 KRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNMK 217 Query: 181 YPTAHPEVIPTSSVKRKGIEVLR 203 P++ P S+V GI +LR Sbjct: 218 TQGCFPQLFPVSAVTFSGIHLLR 240 >gi|149060439|gb|EDM11153.1| GTP-binding protein 8 (putative), isoform CRA_c [Rattus norvegicus] Length = 252 Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 24/183 (13%) Query: 30 PEIAFSGRS-NVGKSSLINILVNRKNLARTSNAP------GRTQHLNFF-VPKDFSNLKN 81 P + GR+ +V +++ N + + R +AP G T+ +NFF V K F+ Sbjct: 74 PSLEDIGRAESVFAATVRNRIEYLSSAVRLDHAPSLRQPEGHTKKMNFFKVGKHFT---- 129 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVDMPGYGY RAP+ VD ++ YL ER+ L+ +LL+D G+ ++D Sbjct: 130 ------LVDMPGYGY-RAPEDFVD----MVETYLKERNNLKRTFLLVDSVVGITKLDNIA 178 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ A+ Y ++LTKIDK S ++ L+ +++ P++ P S+V G+ Sbjct: 179 IEMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQEFVNTQTQGCFPQLFPISAVTYSGVH 238 Query: 201 VLR 203 +L+ Sbjct: 239 LLK 241 >gi|311270000|ref|XP_003132725.1| PREDICTED: GTP-binding protein 8-like isoform 2 [Sus scrofa] Length = 240 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 23/160 (14%) Query: 57 RTSNAP------GRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 R +AP G T+ +NFF V + F+ LVDMPGYGY RAP+ VD Sbjct: 83 RLDHAPDLRCPEGHTKKMNFFKVGRYFT----------LVDMPGYGY-RAPEDFVD---- 127 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQ 168 ++ YL ER L +LL+D G+++ D ++ A+ Y +VLTKIDK S + Sbjct: 128 MVEDYLKERRNLMRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVMVLTKIDKSSKGRLLK 187 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + L+ K++ P++ P S+V GI +LR I + Sbjct: 188 QVLQIQKFVDTETQGCFPQLFPVSAVTFSGIHLLRCFIAD 227 >gi|228902998|ref|ZP_04067138.1| GTP-binding protein YihA [Bacillus thuringiensis IBL 4222] gi|228910304|ref|ZP_04074121.1| GTP-binding protein YihA [Bacillus thuringiensis IBL 200] gi|228941636|ref|ZP_04104183.1| GTP-binding protein YihA [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228967572|ref|ZP_04128598.1| GTP-binding protein YihA [Bacillus thuringiensis serovar sotto str. T04001] gi|228974565|ref|ZP_04135131.1| GTP-binding protein YihA [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981160|ref|ZP_04141460.1| GTP-binding protein YihA [Bacillus thuringiensis Bt407] gi|228778360|gb|EEM26627.1| GTP-binding protein YihA [Bacillus thuringiensis Bt407] gi|228784968|gb|EEM32981.1| GTP-binding protein YihA [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792151|gb|EEM39727.1| GTP-binding protein YihA [Bacillus thuringiensis serovar sotto str. T04001] gi|228817848|gb|EEM63926.1| GTP-binding protein YihA [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228849364|gb|EEM94201.1| GTP-binding protein YihA [Bacillus thuringiensis IBL 200] gi|228856674|gb|EEN01194.1| GTP-binding protein YihA [Bacillus thuringiensis IBL 4222] Length = 149 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 57 RTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS 116 R S+ PG+TQ LNFF+ + M VD+PGYGYA+ K +WG +I Y + Sbjct: 2 RISSKPGKTQTLNFFLINEM---------MHFVDVPGYGYAKVSKSERAAWGKMIETYFT 52 Query: 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 R L L++D RH D ++ FL + I+ TK DK+ Q+ L+ K Sbjct: 53 TRKQLDAAVLVVDLRHQPTSDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVK 111 >gi|206603472|gb|EDZ39952.1| GTP-binding protein [Leptospirillum sp. Group II '5-way CG'] Length = 212 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 12/165 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKSSLIN L NR +LA+ PG+T +NL + +D Sbjct: 35 IGFVGRSNVGKSSLINKLANRHHLAKVGRTPGKTT---------LANLYSLDKGGYFIDF 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYGY + K+ L + + L+ + LL+D R + +D + +L+ Sbjct: 86 PGYGYMKRDKETAQKARSLSTLLVEKMPCLQRILLLVDIRRDILPVDLEALFWLENLGRP 145 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSS 193 IVL+K D ++ + K L+R + T+ P V+ T + Sbjct: 146 LTIVLSKSDLVNRNEVHRVQKLWKDLLRERMSQVTSSPLVLSTKT 190 >gi|229158086|ref|ZP_04286156.1| GTP-binding protein YihA [Bacillus cereus ATCC 4342] gi|228625405|gb|EEK82162.1| GTP-binding protein YihA [Bacillus cereus ATCC 4342] Length = 165 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/150 (34%), Positives = 72/150 (48%), Gaps = 11/150 (7%) Query: 57 RTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS 116 R S+ PG+TQ LNFF L N + M VD+PGYGYA+ K +WG +I Y + Sbjct: 2 RISSKPGKTQTLNFF-------LINEM--MHFVDVPGYGYAKVSKTERAAWGKMIETYFT 52 Query: 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 R L L++D RH D ++ FL + I+ TK DK+ Q+ L+ K Sbjct: 53 TREQLDAAVLVVDLRHKPTNDDVMMYDFLKHYDIPTIIIATKADKIPKGKWQKHLKVVKE 112 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + EV+ SS G E KAI Sbjct: 113 TLD--IESGDEVVLFSSETGLGKEEAWKAI 140 >gi|219110105|ref|XP_002176804.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411339|gb|EEC51267.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 390 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 29/153 (18%) Query: 30 PEIAFSGRSNVGKSSLINIL---------VNRKNL---------------ARTSNAPGRT 65 PEI +GRSNVGKS+L+N L V R+ + A TS+ PG T Sbjct: 122 PEIVLAGRSNVGKSTLLNALLYGNKHADAVVRQRVRGKTPESVKQPKGMKATTSDKPGET 181 Query: 66 QHLNFFVPKDFSNLKNNL---PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST-- 120 + + F+ +N + A+ LVD+PGYG+A A ++ + L+ YL +R Sbjct: 182 RAITFYQLAARLERENGVFYDHALRLVDLPGYGFAYAKEEAARRYRALMADYLLKRGNKY 241 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 L+ V LLID RHG+K+ D D L + + Q Sbjct: 242 LKRVLLLIDARHGMKKADVDFLMDLQEHSRHLQ 274 >gi|118373644|ref|XP_001020015.1| conserved hypothetical protein [Tetrahymena thermophila] gi|89301782|gb|EAR99770.1| conserved hypothetical protein [Tetrahymena thermophila SB210] Length = 336 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 65/123 (52%) Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D PGYG+A W G+I Y+ S L +YLLI+ HG+K+ D + S + K Sbjct: 132 IIDPPGYGFANVNVNAKKKWQGMIYDYIQISSRLARIYLLINAEHGLKKNDMSLLSQIQK 191 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + V+ QIVLTK DK+ +T+ ++ + HP + S+ GI LR +I Sbjct: 192 QNVNIQIVLTKADKVPERALYDTMLSIGMQVKGFNNIHPLLHACSARNGFGIPELRHSIF 251 Query: 208 ETI 210 +++ Sbjct: 252 DSL 254 >gi|228993210|ref|ZP_04153131.1| GTP-binding protein YihA [Bacillus pseudomycoides DSM 12442] gi|228766536|gb|EEM15178.1| GTP-binding protein YihA [Bacillus pseudomycoides DSM 12442] Length = 149 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 9/119 (7%) Query: 57 RTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS 116 R S+ PG+TQ LNFF L N + M VD+PGYGYA+ K +WG +I Y + Sbjct: 2 RISSKPGKTQTLNFF-------LINEM--MHFVDVPGYGYAKVSKTERAAWGRMIETYFT 52 Query: 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 R L L++D RH D ++ FL + I+ TK DK+ Q+ L+ K Sbjct: 53 TREQLDAAVLVVDLRHPPTNDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVK 111 >gi|320593609|gb|EFX06018.1| GTP-binding protein [Grosmannia clavigera kw1407] Length = 535 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 84/214 (39%), Gaps = 62/214 (28%) Query: 6 IFTKSAWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVN------------- 51 +F + A FL P LP PEI GRSNVGKS+L+N L Sbjct: 141 LFLQPAPRFLYSAPRFLHLPVNTRMPEICILGRSNVGKSTLLNALAGLETGGRAGRSHGA 200 Query: 52 ---RKNLARTSNAPGRTQHLNF--FVP--------------KDFSNLKNNLPAMA----- 87 R LA TS G T +N F P SN KNN A A Sbjct: 201 RPGRLGLAITSAHAGCTVMMNGYGFGPPLRPGTVVFDSREGDTNSNKKNNKSATATTLAS 260 Query: 88 -------------------LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 L+DMPGYG+ + WG I +YL R+TLR LL+ Sbjct: 261 RSQRRAQKPGEPSPAHSLVLLDMPGYGF-----MSRSEWGTEIAKYLQRRTTLRGAVLLV 315 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 D G+K D+ + L V +VLTK DKL Sbjct: 316 DAVAGIKDGDRQALAMLRDANVRTTVVLTKADKL 349 >gi|289619342|emb|CBI53625.1| unnamed protein product [Sordaria macrospora] Length = 556 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 75/180 (41%), Gaps = 52/180 (28%) Query: 30 PEIAFSGRSNVGKSSLIN---------------ILVNRKNLARTSNAPGRTQHLNFFV-- 72 PE+ GRSNVGKS+LIN + R A TS G T+ +N + Sbjct: 245 PEVCILGRSNVGKSTLINALSGAAGAAAGRAHGLEARRAGRAITSAHAGSTKTMNAYGFG 304 Query: 73 -------------PKD-----------------FSNLKNNLPAMALVDMPGYGYARAPKK 102 P+D FS + + LVDMPGYG+ Sbjct: 305 PPPKVAPPKKEADPEDGESRVKSRSEKREEKNKFSKERKPTNQLILVDMPGYGF-----N 359 Query: 103 NVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 + WG IV+YL +R L+ +LID GVK+ D+ V L V ++LTK DK+ Sbjct: 360 SQAEWGKEIVKYLEKRQMLKGAVVLIDSVAGVKKDDRTVLGMLRDAGVRTTVILTKADKI 419 >gi|32490912|ref|NP_871166.1| hypothetical protein WGLp163 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340065|sp|Q8D338|ENGB_WIGBR RecName: Full=Probable GTP-binding protein EngB gi|25166118|dbj|BAC24309.1| yihA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 203 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 17/198 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + LPK EIAF GRSN GKS IN L ++K ++ +S PGRT +N F+ Sbjct: 6 FLLSANNLFNLPKDNGLEIAFFGRSNSGKSKAINALFDKKKISISSKKPGRTNFINVFIM 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + ++D+PG+GY++ KK L+ Y R +L+ + +L D R Sbjct: 66 N---------KKLRIIDLPGFGYSKISKKKSKI-KYLLDDYFKSRKSLKILIILEDIRRS 115 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-----EV 188 V + ++ + + I+L+K DK++ ++ L K I T H EV Sbjct: 116 VSEFNEKLIYLSFNLKIPVLILLSKSDKINFEKRKKKLSLFKKYIE--KTTHTKNIYIEV 173 Query: 189 IPTSSVKRKGIEVLRKAI 206 + SS+ R GI +K + Sbjct: 174 LTFSSISRDGILFTKKIL 191 >gi|85000233|ref|XP_954835.1| hypothetical protein [Theileria annulata strain Ankara] gi|65302981|emb|CAI75359.1| hypothetical protein, conserved [Theileria annulata] Length = 410 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 20/213 (9%) Query: 10 SAWIFLRGVPEIGLL---------PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 S IF R P++ LL P+ PEI G + GKSSL+N ++N+ NL++T Sbjct: 56 SPLIFNRYKPKVKLLASTLSCDSFPRNHIPEICIFGAAKSGKSSLLNAILNKPNLSKTQ- 114 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL--IVRYLSER 118 +T L+FF + + + LVDMP P++N+ + L + YL R Sbjct: 115 --FKTSKLHFFKVGGSNGI------VMLVDMPNCIKHNKPEENLKNEKILEICLNYLKYR 166 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 L ++ID G+ D + +F + +++ +VL K D P + ++ + + Sbjct: 167 QNLLLTIIIIDSLKGITSEDLHLINFCNHNRLNFLVVLNKSDLFKPVELTKKIQTMENQL 226 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++ +IP SS K + I L + + + IN Sbjct: 227 ISFKYKINNIIPVSSTKLQNINQLHQILTDFIN 259 >gi|291400671|ref|XP_002716747.1| PREDICTED: GTP-binding protein 8 isoform 1 [Oryctolagus cuniculus] Length = 256 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 23/155 (14%) Query: 57 RTSNAP------GRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 R +AP G T+ +NFF V K F+ LVDMPGYGY RAP+ VD Sbjct: 101 RLDHAPDLPRPEGHTKKMNFFKVGKYFT----------LVDMPGYGY-RAPEDFVD---- 145 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-TTAQ 168 ++ YL ER L+ +LL+D G+ + D ++ A+ Y +VLTK DK S + Sbjct: 146 MVETYLKERRNLKRTFLLVDSVVGITKTDNIAIEMCEEFALPYVMVLTKTDKSSKGHLLK 205 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + L+ K++ P++ P S+V GI +L+ Sbjct: 206 QVLQIQKFVNMQTQGCFPQLFPVSAVTHSGIHLLK 240 >gi|71027011|ref|XP_763149.1| hypothetical protein [Theileria parva strain Muguga] gi|68350102|gb|EAN30866.1| hypothetical protein TP03_0131 [Theileria parva] Length = 410 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 20/213 (9%) Query: 10 SAWIFLRGVPEIGLL---------PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 S IF R P++ LL P+ PEI G S GKSSL+N ++N+ NL++ Sbjct: 56 SPLIFNRYKPKVKLLASTLSSDSFPRNQIPEICIFGASKSGKSSLLNAILNKPNLSKVQ- 114 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL--IVRYLSER 118 +T L+FF + + + LVDMP P +N+ + L + YL R Sbjct: 115 --FKTNKLHFFQVGGSNGI------VMLVDMPNCIKQNKPDENLKNEKILEICLNYLKYR 166 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 L ++ID G+ D + +F + +++ +VL K D P + ++ + + Sbjct: 167 ENLVLTIIIIDSLKGITSEDLHIINFCNHNRLNFLVVLNKSDLFKPVELTKKIQTMETQL 226 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++ ++P SS K + I L + + + IN Sbjct: 227 NSFKYKINNIVPVSSTKLQNINQLHQILTDFIN 259 >gi|75763598|ref|ZP_00743296.1| GTP-binding protein YihA [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488914|gb|EAO52432.1| GTP-binding protein YihA [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 143 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 9/116 (7%) Query: 57 RTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS 116 R S+ PG+TQ L FF L N + M LVD+PGYGYA+ K +WG +I Y + Sbjct: 2 RISSKPGKTQTLXFF-------LINEM--MHLVDVPGYGYAKVSKSERAAWGKMIETYFT 52 Query: 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE 172 R L L++D RH D ++ FL + I+ TK DK+ Q+ L+ Sbjct: 53 TRKQLDAAVLVVDLRHQPTSDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLK 108 >gi|261335803|emb|CBH18797.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 655 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 19/168 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S +F++ + L+ V + LP+ PE+ F G+ NVGKSS+I+ L+ L R Sbjct: 48 LSDEVFSRGN-MHLKNVDVVSALPEGLHSFPEVCFIGKPNVGKSSIISCLLRNPRLGRAG 106 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA---PKKNVD--SWGGLIVRY 114 G T+ L FF D A+ LVD PGYG + P+ + S ++ RY Sbjct: 107 RVRGTTRLLQFFNVGD---------ALLLVDTPGYGGWKGRHLPQSVAERASAFAILFRY 157 Query: 115 LSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 L+ RS L+ VY +++ V+ D+++F FL + + + I+++K+D Sbjct: 158 LALRSKGPLKRVYWVMEATKPVQPRDEEIFVFLRNEQIPFSIIISKLD 205 >gi|154343473|ref|XP_001567682.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065014|emb|CAM43126.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 762 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 26/146 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+ F G+ GKSSLI+ L++ + L ++ PG T+ L FF D A+ LV Sbjct: 85 PEVCFIGKPGCGKSSLISCLLHNRRLGKSGATPGTTRLLQFFNVGD---------ALLLV 135 Query: 90 DMPGYGYAR--------APKKNVDSWGGLIVRYLSER--STLRCVYLLIDCRH----GVK 135 D PGYG R A + N S ++ RYL+ R S L+ VY L++ + Sbjct: 136 DTPGYGGWRGREVGQRLAEQANAFS---ILFRYLALRNGSNLKRVYWLVESSARTPVSFQ 192 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDK 161 D+++ +FL ++ + + +VLTKID+ Sbjct: 193 PRDEELLTFLSRERIPFSVVLTKIDR 218 >gi|74026378|ref|XP_829755.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70835141|gb|EAN80643.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 655 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 19/168 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S +F++ + L+ V + LP+ PE+ F G+ NVGKSS+I+ L+ L R Sbjct: 48 LSDEVFSRGN-MHLKNVDVVSALPEGLHSFPEVCFIGKPNVGKSSIISCLLRNPRLGRAG 106 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA---PKKNVD--SWGGLIVRY 114 G T+ L FF D A+ LVD PGYG + P+ + S ++ RY Sbjct: 107 RVRGTTRLLQFFNVGD---------ALLLVDTPGYGGWKGRHLPQSVAERASAFAILFRY 157 Query: 115 LSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 L+ RS L+ VY +++ V+ D+++F FL + + + I+++K+D Sbjct: 158 LALRSKGPLKRVYWVMEATKPVQPRDEEIFVFLRNEQIPFSIIISKLD 205 >gi|224158020|ref|XP_002337923.1| predicted protein [Populus trichocarpa] gi|222870018|gb|EEF07149.1| predicted protein [Populus trichocarpa] Length = 206 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/73 (53%), Positives = 44/73 (60%), Gaps = 9/73 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F D Sbjct: 124 PSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFKVND--------- 174 Query: 85 AMALVDMPGYGYA 97 + LVD+PGYGY Sbjct: 175 SWYLVDLPGYGYG 187 >gi|251772780|gb|EES53342.1| GTP-binding protein, HSR1-related [Leptospirillum ferrodiazotrophum] Length = 213 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 64/141 (45%), Gaps = 10/141 (7%) Query: 24 LPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 +P AG P I +GRSNVGKSSLIN L LART PG T NL Sbjct: 27 MPPAGEGPIIGLAGRSNVGKSSLINRLTEHGGLARTGKRPGATT---------LPNLYRI 77 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +D PGYGY + S R + R +R V LL+D R + +D + Sbjct: 78 HTGGYFLDFPGYGYMNRGQSTKASSQDASTRIVEARPDIRRVLLLVDARRELLPLDTEAA 137 Query: 143 SFLDKKAVSYQIVLTKIDKLS 163 + ++ IV+TK D LS Sbjct: 138 RWFRLMSIPVSIVVTKTDTLS 158 >gi|84999600|ref|XP_954521.1| GTP-binding protein [Theileria annulata] gi|65305519|emb|CAI73844.1| GTP-binding protein, putative [Theileria annulata] Length = 212 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 55/155 (35%), Positives = 78/155 (50%), Gaps = 23/155 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLI--------------NILVNRKNLARTSNAPGRTQHLNF 70 P P+IAF G SNVGKSSLI NI+ N K L APGRT+HL Sbjct: 50 PLTKIPQIAFVGYSNVGKSSLINSILYGADIPLFARNIVSNSKMLKNPKFAPGRTRHLFT 109 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F +L NN+ +LVD+PGYG A+ ++ +S L ++ L+D Sbjct: 110 F------DLGNNI---SLVDLPGYGCAKVSDVSLLINKSGRKLEMSGLCFLYRIFSLVDS 160 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 G + D ++S L++ + +Q+VLTK D+L T Sbjct: 161 IKGPVKEDFKLWSMLNEMEIPFQVVLTKCDRLKTT 195 >gi|294655634|ref|XP_002770159.1| DEHA2C02970p [Debaryomyces hansenii CBS767] gi|199430484|emb|CAR65526.1| DEHA2C02970p [Debaryomyces hansenii] Length = 414 Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 24/143 (16%) Query: 30 PEIAFSGRSNVGKSSLIN-ILVNRK-----NL----ARTSNAPGRTQHLNFFVPKDFSNL 79 PE+ G +NVGKSSLIN +LVNR+ NL A S G T+ LN F N+ Sbjct: 163 PEVLLLGNTNVGKSSLINSLLVNREENKSANLSTEHAFVSKRAGYTKTLNCF------NI 216 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 N L M D PGYG + S G +I Y+++ +LR V++LID G ++ D Sbjct: 217 GNKLRIM---DSPGYG-----EFGESSQGEVITDYITKGQSLRRVFVLIDSVKGFQEEDL 268 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 + FL + +S+ ++ TK+D++ Sbjct: 269 HIIDFLISEGISFDLIFTKVDQV 291 >gi|119600058|gb|EAW79652.1| GTP-binding protein 8 (putative), isoform CRA_a [Homo sapiens] gi|119600060|gb|EAW79654.1| GTP-binding protein 8 (putative), isoform CRA_a [Homo sapiens] Length = 134 Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 17/141 (12%) Query: 68 LNFF-VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NFF V K F+ +VDMPGYG+ RAP+ VD ++ YL ER L+ +L Sbjct: 1 MNFFKVGKHFT----------VVDMPGYGF-RAPEDFVD----MVETYLKERRNLKRTFL 45 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAH 185 L+D G+++ D ++ A+ Y IVLTKIDK S ++ L+ K++ Sbjct: 46 LVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNMKTQGCF 105 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P++ P S+V GI +LR I Sbjct: 106 PQLFPVSAVTFSGIHLLRCFI 126 >gi|116202801|ref|XP_001227212.1| hypothetical protein CHGG_09285 [Chaetomium globosum CBS 148.51] gi|88177803|gb|EAQ85271.1| hypothetical protein CHGG_09285 [Chaetomium globosum CBS 148.51] Length = 288 Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 58/181 (32%), Positives = 76/181 (41%), Gaps = 53/181 (29%) Query: 30 PEIAFSGRSNVGKSSLINILVN------RK---------NLARTSNAPGRTQHLNFF--- 71 PEI GRSNVGKS+LIN L RK LA TS G T+ LN + Sbjct: 36 PEICLIGRSNVGKSTLINALSGADAETARKAHGLRARGAGLAITSRTAGSTKSLNAYGFG 95 Query: 72 ------------VPKDFSNLKNNLPA------------------MALVDMPGYGYARAPK 101 K+ + ++ + + + +VDMPGYG Sbjct: 96 PPTKQQRLAALQAAKEAKDAEDAVASRGVRRAAREKREPPPQYRLIMVDMPGYGLG---- 151 Query: 102 KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 + +WG I +YL+ R LR LLID G+K D V L V +VLTK+DK Sbjct: 152 -SEAAWGREIEKYLARRKMLRGAVLLIDAVAGIKDADLMVLETLRDAEVRTAVVLTKVDK 210 Query: 162 L 162 L Sbjct: 211 L 211 >gi|50549471|ref|XP_502206.1| YALI0C24013p [Yarrowia lipolytica] gi|49648073|emb|CAG82528.1| YALI0C24013p [Yarrowia lipolytica] Length = 415 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 33/204 (16%) Query: 30 PEIAFSGRSNVGKSSLINIL-------VNRKNLARTSNAPGR----TQHLNFFVP----- 73 PEI F G +N GKS+L+ + V + +L ++ G + +N P Sbjct: 135 PEIVFMGHTNAGKSTLVQHVLAWGRPDVPQSHLHSPTSKKGHKGSLSNSINSAFPVISKK 194 Query: 74 ----KDFSNLKNNLP-----AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 K F+ +P + LVD+PGYGY K++ G ++ +YL R+ LR Sbjct: 195 HGFTKSFNCYGLTIPNSGGNQIRLVDIPGYGY-----KSLKDQGAVVEQYLERRTNLRMA 249 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ-ETLEKTKYLIRNYPT 183 L+ID G++ D+ + S L+K V++Q+VLTK D L + E L + +L N P Sbjct: 250 ILVIDATRGIQDEDKYMLSTLNKYGVTWQVVLTKSDMLVGGDKKLEALGREMWLAANPPK 309 Query: 184 AHPEVIPTSSVKRKGIEVLRKAIL 207 + +++ + +++ + R+A+L Sbjct: 310 SGSQMVKLTKPQKE--KWARRALL 331 >gi|302895911|ref|XP_003046836.1| hypothetical protein NECHADRAFT_76919 [Nectria haematococca mpVI 77-13-4] gi|256727763|gb|EEU41123.1| hypothetical protein NECHADRAFT_76919 [Nectria haematococca mpVI 77-13-4] Length = 441 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 70/151 (46%), Gaps = 14/151 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF----VPKDFSNL--KNNL 83 PEI G SN GKS +N LV LA+ S G+T +N + PK L K + Sbjct: 203 PEIVIVGASNAGKSHFLNALVGDFRLAKVSYRAGKTTTMNAYGVGPRPKIAPELIRKGDA 262 Query: 84 P---AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 P ++ L+D PGYGY ++ SWG IV+YL R TLR +LI +D Sbjct: 263 PPKHSLVLMDTPGYGY-----RSKASWGDTIVKYLIHRKTLRGAVILIPADKDNYGLDTW 317 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETL 171 + L + +V+TK DK E L Sbjct: 318 MLKTLARTMTRTLVVITKTDKCGEEWPTECL 348 >gi|154337503|ref|XP_001564984.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062023|emb|CAM45109.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1000 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+ GR+ GKSSL+N L+ ++ +A+TS+ P T+ ++F F ++ N Sbjct: 253 EVVLVGRACAGKSSLLNALLGQQ-VAKTSSMPNTTRKISFYQSVTPEQLHAFHAREHHNQ 311 Query: 80 KNNLPA----MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP + VD+PGYG D+ L Y R ++ V +DC G+ Sbjct: 312 LVKLPGGGLQLTFVDLPGYGIEGMSDAWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 371 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI R Y P ++P Sbjct: 372 KTDIKYLEWIENVHGTCFVVLTKCDSVPHSRVCSVMRQVYALITKHRRKYRKVFPFILPV 431 Query: 192 SSVKRKGIEVLRKAILET 209 S+ +EVLR I ET Sbjct: 432 SAKDGTNMEVLRGLITET 449 >gi|325117193|emb|CBZ52745.1| GTP-binding conserved hypothetical domain-containing protein [Neospora caninum Liverpool] Length = 630 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/197 (29%), Positives = 85/197 (43%), Gaps = 60/197 (30%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILV-------NRK-----------NLARTSNAPGRT 65 LP+ G PE+AF GRSNVGKSSL+N L +R+ + AR S PG T Sbjct: 161 LPRLGLPEVAFLGRSNVGKSSLLNALCRYTQAQRHRRASKAVRGASAMDFARVSRRPGST 220 Query: 66 QHLNFFVPKDFSNLKNNLPA-------------------------------------MAL 88 + +N + + F KN PA + Sbjct: 221 RSINLY--EVFGGAKN--PASCAGVQKKGGKSRGGARVAGQAPRAKAPLTSSGDRGLLVF 276 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D+PGYG+ R VR Y+ +R+ LR +L+D R G++ D D+ +L Sbjct: 277 ADLPGYGFTRGLSAQESQRLSKNVRLYVEKRNELRLFLILVDGRAGIQDHDADLLRWLVA 336 Query: 148 KAVSYQIVLTKIDKLSP 164 ++V +V+TK D L+P Sbjct: 337 QSVPTLLVVTKADCLAP 353 >gi|15668495|ref|NP_247293.1| GTP-binding protein [Methanocaldococcus jannaschii DSM 2661] gi|2501554|sp|Q57768|ENGB_METJA RecName: Full=Probable GTP-binding protein EngB gi|1591040|gb|AAB98305.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 219 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 26/190 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GRSNVGKS+ + ++ RK++ R PG T +N + ++ LVDMPG+G Sbjct: 31 GRSNVGKSTFVRLMTGRKDI-RVGKKPGVTLKINEY----------DMGEYILVDMPGFG 79 Query: 96 Y-ARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCR-----------HGVKQIDQDVF 142 Y A PKK + IV Y+ E + + +ID + G ID ++F Sbjct: 80 YMAGLPKKVQEKIKDEIVHYIEEHADEIAAAVQIIDTKSFFEIVERWKGRGEIPIDLEMF 139 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIE 200 F+ +S +V K+DK+ L+ ++ P H ++P + KGIE Sbjct: 140 DFITDLKISPILVANKMDKIKKEEWDAVLDGICEYLKCQPPWHQWKFIVPAILKEGKGIE 199 Query: 201 VLRKAILETI 210 ++K ILE + Sbjct: 200 EIKKKILERV 209 >gi|6320543|ref|NP_010623.1| hypothetical protein YDR336W [Saccharomyces cerevisiae S288c] gi|74627209|sp|Q05473|YD336_YEAST RecName: Full=Uncharacterized GTP-binding protein YDR336W gi|1230663|gb|AAB64772.1| Ydr336wp [Saccharomyces cerevisiae] gi|190404723|gb|EDV07990.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi|207346439|gb|EDZ72932.1| YDR336Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256269518|gb|EEU04805.1| YDR336W-like protein [Saccharomyces cerevisiae JAY291] gi|259145573|emb|CAY78837.1| EC1118_1D0_6260p [Saccharomyces cerevisiae EC1118] gi|285811354|tpg|DAA12178.1| TPA: hypothetical protein YDR336W [Saccharomyces cerevisiae S288c] gi|323334166|gb|EGA75550.1| YDR336W-like protein [Saccharomyces cerevisiae AWRI796] gi|323349206|gb|EGA83436.1| YDR336W-like protein [Saccharomyces cerevisiae Lalvin QA23] Length = 314 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 28/192 (14%) Query: 30 PEIAFSGRSNVGKSSLINIL----VNRK--NLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 PE+ F G +NVGKSS++N + V+R +LAR S G T+ LN + N+ N L Sbjct: 134 PEVIFLGGTNVGKSSILNNITTSHVSRDLGSLARVSKTTGFTKTLNCY------NVGNRL 187 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D PGYG+ + ++ G + ++YL ER L +LL+ + D + Sbjct: 188 ---RMIDSPGYGFNSSKEQ-----GKVTLQYLLERKQLVRCFLLLAGDKEINNTDNMIIQ 239 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------KRK 197 ++ + V +++V TK+DK+ + + L+ + PT P ++ T+S+ KR Sbjct: 240 YIHEHGVPFEVVFTKMDKVKDLNKFKKKVMSSGLM-DLPTL-PRLVLTNSLTSSTSPKRF 297 Query: 198 GIEVLRKAILET 209 GI++LR I ++ Sbjct: 298 GIDLLRYVIFQS 309 >gi|151942312|gb|EDN60668.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 314 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 28/192 (14%) Query: 30 PEIAFSGRSNVGKSSLINIL----VNRK--NLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 PE+ F G +NVGKSS++N + V+R +LAR S G T+ LN + N+ N L Sbjct: 134 PEVIFLGGTNVGKSSILNNITTSHVSRDLGSLARVSKTTGFTKTLNCY------NVGNRL 187 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D PGYG+ + ++ G + ++YL ER L +LL+ + D + Sbjct: 188 ---RMIDSPGYGFNSSKEQ-----GKVTLQYLLERKQLVRCFLLLAGDKEINNTDNMIIQ 239 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------KRK 197 ++ + V +++V TK+DK+ + + L+ + PT P ++ T+S+ KR Sbjct: 240 YIHEHGVPFEVVFTKMDKVKDLNKFKKKVMSSGLM-DLPTL-PRLVLTNSLTSSTSPKRF 297 Query: 198 GIEVLRKAILET 209 GI++LR I ++ Sbjct: 298 GIDLLRYVIFQS 309 >gi|196006141|ref|XP_002112937.1| hypothetical protein TRIADDRAFT_56574 [Trichoplax adhaerens] gi|190584978|gb|EDV25047.1| hypothetical protein TRIADDRAFT_56574 [Trichoplax adhaerens] Length = 239 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 14/130 (10%) Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 G T+ LNF+ ++ N L LVD PGYGY R+PK + L+ RY R+ LR Sbjct: 102 GHTRLLNFY------SIANKL---FLVDTPGYGY-RSPKY----FEELVQRYTVNRTRLR 147 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 LLID RHG K D + + ++ +SYQIVLTK+D ++ L ++ Sbjct: 148 NSCLLIDSRHGFKSNDLEALAVMEDYGLSYQIVLTKVDCVTRGNMLRLLSDVYEIVHKTN 207 Query: 183 TAHPEVIPTS 192 P+V P S Sbjct: 208 CCLPQVFPVS 217 >gi|329906993|ref|ZP_08274536.1| GTP-binding protein EngB [Oxalobacteraceae bacterium IMCC9480] gi|327547126|gb|EGF31997.1| GTP-binding protein EngB [Oxalobacteraceae bacterium IMCC9480] Length = 99 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/58 (56%), Positives = 39/58 (67%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 F V + LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPTTQVPEIAFAGRSNAGKSTAINILCNQKKLAFASKTPGRTQHINYF 66 >gi|289192567|ref|YP_003458508.1| GTP-binding protein HSR1-related protein [Methanocaldococcus sp. FS406-22] gi|288939017|gb|ADC69772.1| GTP-binding protein HSR1-related protein [Methanocaldococcus sp. FS406-22] Length = 215 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 26/190 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GRSNVGKS+ + ++ RK++ + PG T +N + ++ LVDMPG+G Sbjct: 27 GRSNVGKSTFVRLMTGRKDV-KVGKKPGVTLKINEY----------DMGEYILVDMPGFG 75 Query: 96 Y-ARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCR-----------HGVKQIDQDVF 142 Y A PKK + IV Y+ + + +ID + G ID ++F Sbjct: 76 YMAGLPKKVQEKIKDEIVHYIENHADEIAAAVQIIDTKSFFEIVERWKGKGEIPIDLEMF 135 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIE 200 F+ +S +V K+DK+ E L+ ++ P H ++P + KGIE Sbjct: 136 DFITDLKISPILVANKMDKIKKDEWDEVLDGICEYLKCQPPWHQWKFIVPAILKEGKGIE 195 Query: 201 VLRKAILETI 210 ++K ILE + Sbjct: 196 EIKKKILERV 205 >gi|257458774|ref|ZP_05623897.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter gracilis RM3268] gi|257443762|gb|EEV18882.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter gracilis RM3268] Length = 299 Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 34/65 (52%), Positives = 43/65 (66%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S+ F+ I P+ E+AF GRSNVGKSSLIN L RKNLA++S+ PG+TQ +N Sbjct: 5 SSAQFITSAANIAGAPEFAMSEVAFLGRSNVGKSSLINALTGRKNLAKSSSTPGKTQLIN 64 Query: 70 FFVPK 74 FF K Sbjct: 65 FFEVK 69 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 21/139 (15%) Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D ++L N+ ++ VD+PG+GYA+ KK W + ++ ER ++ LID R Sbjct: 170 DLASLGENI-SLIFVDLPGFGYAKVSKKLHYIWQKNLDEFIKERLNIKLFVHLIDARQFD 228 Query: 135 KQIDQDVFSFL------DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 +ID+++ ++L D+K V + TK DKL+ + E+ K L + P+ Sbjct: 229 LEIDKNLQNYLSSFLRGDQKVVR---LYTKADKLNQS------ERAKLLRHD-----PQA 274 Query: 189 IPTSSVKRKGIEVLRKAIL 207 I S++K G+ R+ I+ Sbjct: 275 ILVSTLKGSGLAKAREIIV 293 >gi|221506491|gb|EEE32108.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 710 Score = 68.2 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 53/206 (25%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILV----------NRKNLARTSNAPGRTQHLNFF-- 71 LP G PE+AF GRSNVGKSSL+N L R +AR S PG T+ +N + Sbjct: 255 LPSLGLPEVAFLGRSNVGKSSLLNALCLYTQKKHRGRTRLEMARVSRRPGSTRSINLYEA 314 Query: 72 -------------------------------VP-KDFSNLKNNLPAMA--------LVDM 91 +P K + +P A D+ Sbjct: 315 FGGCASEGSLERKGKRSRTRKSTGHTTRDRQLPRKQQGKHPSGVPLTATGNRGLLLFADL 374 Query: 92 PGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PGYG+AR VR Y+ +R+ LR +L+D R G++ D ++ +L ++V Sbjct: 375 PGYGFARGLSGEESQQLSKNVRLYVEKRNELRLFLVLVDGRLGLQDHDAEMLRWLAAQSV 434 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKY 176 +V+TK D L + L + + Sbjct: 435 PTLLVVTKADCLGAKDLENLLNQLSF 460 >gi|83767467|dbj|BAE57606.1| unnamed protein product [Aspergillus oryzae] Length = 177 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 9/89 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ +N F K + L+ Sbjct: 96 PEVAFLGRSNVGKSSLLNAIMG-KEICWTSSKPGRTREMNAF---GIGGTKGGESKIVLL 151 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER 118 DMPGYG K + WG I++YL R Sbjct: 152 DMPGYG-----KASRTEWGIEIMKYLQGR 175 >gi|322495522|emb|CBZ30827.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 620 Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 15/188 (7%) Query: 21 IGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 +G +P P P IA +GR GK+SL+ ++L R++ GR+ N + +D N Sbjct: 70 VGFVPDGNPATPLIALAGRERCGKTSLL------RSLFRSAREVGRS---NRHLRRDAMN 120 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC--RHGVKQ 136 N +VD+PG G P V L+ + + +L+ +Y +D +HG+ Sbjct: 121 FFNVGGVFNVVDLPGCGGTSVPWSAVLQHAVLLRNFARCQPSLKMLYYCMDTHYKHGLYI 180 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVIPTSSVK 195 D D+ FL ++ ++ IVLTK D+++ Q +E + + + HP V+ TS+ Sbjct: 181 QDIDLLQFLAREVPNFTIVLTKADQINDRAIQTVHMEDIRKELIYHDIHHP-VLVTSAFH 239 Query: 196 RKGIEVLR 203 GI+ LR Sbjct: 240 MGGIDTLR 247 >gi|85077909|ref|XP_956077.1| hypothetical protein NCU04081 [Neurospora crassa OR74A] gi|28917122|gb|EAA26841.1| predicted protein [Neurospora crassa OR74A] Length = 498 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 71/181 (39%), Gaps = 53/181 (29%) Query: 30 PEIAFSGRSNVGKSSLIN---------------ILVNRKNLARTSNAPGRTQHLNFF--- 71 PE+ GRSNVGKS+LIN + R A TS G T+ +N + Sbjct: 189 PEVCILGRSNVGKSTLINALSGAAGAAAGRAHGLEARRAGRAITSAHAGSTKTMNAYGFG 248 Query: 72 ------------------------------VPKDFSNLKNNLPAMALVDMPGYGYARAPK 101 F+ + + LVDMPGYG+ Sbjct: 249 PPPKVAPPKKEAEPEAGESHAIKSRSEKREEKNKFNKERKPTNQLILVDMPGYGF----- 303 Query: 102 KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 + WG I +YL +R L+ +LID GVK+ D+ V L V ++LTK DK Sbjct: 304 NSQAEWGKEITKYLEKRKMLKGAVVLIDSVAGVKKDDRTVLGMLRDAGVRTTVILTKADK 363 Query: 162 L 162 + Sbjct: 364 I 364 >gi|157874287|ref|XP_001685628.1| hypothetical protein [Leishmania major strain Friedlin] gi|68128700|emb|CAJ08833.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 787 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 30/188 (15%) Query: 15 LRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 L+ V + LP+ PE+ F G+ GKSSLI+ L++ L + G T+ L FF Sbjct: 81 LKNVETLTALPEGLHSFPEVCFIGKPGCGKSSLISCLLHNHRLGKAGATAGTTRLLQFFN 140 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYAR--------APKKNVDSWGGLIVRYLSER--STLR 122 D A+ LVD PGYG R A + N S ++ RYL+ R S L+ Sbjct: 141 VGD---------ALLLVDTPGYGGWRGREVGQRLAEQANAFS---ILFRYLALRNGSNLK 188 Query: 123 CVYLLIDCRH----GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 VY L++ + D+++ +FL ++ + + +VLTKID+ A++ ++T + Sbjct: 189 RVYWLMESSAPTPVSFQPRDEELLTFLSRERIPFSVVLTKIDRHWRHYAEQ--QRTADRV 246 Query: 179 RNYPTAHP 186 N HP Sbjct: 247 GNDGFVHP 254 >gi|260940250|ref|XP_002614425.1| hypothetical protein CLUG_05911 [Clavispora lusitaniae ATCC 42720] gi|238852319|gb|EEQ41783.1| hypothetical protein CLUG_05911 [Clavispora lusitaniae ATCC 42720] Length = 367 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 24/143 (16%) Query: 30 PEIAFSGRSNVGKSSLIN-ILVNRKNLARTSNAP---------GRTQHLNFFVPKDFSNL 79 PEI G +N GKS+L+N + +N++ T+ AP G T+ LN + D Sbjct: 119 PEILLLGHTNAGKSTLVNNLFMNKEQAKNTNGAPSLAYVSRRAGFTKCLNCYNVSD---- 174 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + +VD PGYG + + G +++ Y+ R LR +L++D G++ D Sbjct: 175 -----TIRIVDSPGYG-----EFGEEQQGEIVLEYIRRRKELRRTFLVVDSTAGIRDEDA 224 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 + FL + V ++IV TK+D + Sbjct: 225 ALIDFLVEHGVPFEIVFTKVDAV 247 >gi|255728533|ref|XP_002549192.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240133508|gb|EER33064.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 316 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 34/186 (18%) Query: 30 PEIAFSGRSNVGKSSLIN-ILVNRKNLART------SNAPGRTQHLNFFVPKDFSNLKNN 82 PE+ G +N GKSSLIN +L++++ L R+ S G T+ +N F SN Sbjct: 154 PEVLLIGHTNAGKSSLINRLLLDKQKLKRSDQLAYVSARAGFTKTMNCFT---VSN---- 206 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + +VD PG+G+ + G +++ Y+ R+ L+ VY LID G+++ D + Sbjct: 207 --KLRIVDSPGFGW-----HGEEVQGKMVIDYIERRNVLKMVYFLIDTTVGLREEDTVII 259 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L + V + ++ TK+D ++T+EK LI + + I KGI+ + Sbjct: 260 DHLIESGVPFSLIFTKVDN------RKTVEK---LIATFDFTCRKFISDE----KGIKDI 306 Query: 203 RKAILE 208 R ++LE Sbjct: 307 RVSMLE 312 >gi|146096974|ref|XP_001467995.1| hypothetical protein [Leishmania infantum JPCM5] gi|134072361|emb|CAM71069.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 775 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 28/163 (17%) Query: 15 LRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 L+ V + LP+ PE+ F G+ GKSSLI+ L++ L + G T+ L FF Sbjct: 68 LKNVEMLTALPEGLHSFPEVCFIGKPGCGKSSLISCLLHNHRLGKAGATAGTTRLLQFFN 127 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYAR--------APKKNVDSWGGLIVRYLSER--STLR 122 D A+ LVD PGYG R A + N S ++ RYL+ R S L+ Sbjct: 128 VGD---------ALLLVDTPGYGGWRGREMGQRLAEQANAFS---ILFRYLALRNGSNLK 175 Query: 123 CVYLLIDCRH----GVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 VY L++ + D+++ +FL ++ + + +VLTKID+ Sbjct: 176 RVYWLMESSARTPVSFQPRDEELLTFLSRERIPFSVVLTKIDR 218 >gi|322501965|emb|CBZ37049.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 775 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 28/163 (17%) Query: 15 LRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 L+ V + LP+ PE+ F G+ GKSSLI+ L++ L + G T+ L FF Sbjct: 68 LKNVEMLTALPEGLHSFPEVCFIGKPGCGKSSLISCLLHNHRLGKAGATAGTTRLLQFFN 127 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYAR--------APKKNVDSWGGLIVRYLSER--STLR 122 D A+ LVD PGYG R A + N S ++ RYL+ R S L+ Sbjct: 128 VGD---------ALLLVDTPGYGGWRGREMGQRLAEQANAFS---ILFRYLALRNGSNLK 175 Query: 123 CVYLLIDCRH----GVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 VY L++ + D+++ +FL ++ + + +VLTKID+ Sbjct: 176 RVYWLMESSARTPVSFQPRDEELLTFLSRERIPFSVVLTKIDR 218 >gi|72548359|ref|XP_843381.1| hypothetical protein [Leishmania major strain Friedlin] gi|323363898|emb|CBZ12904.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 620 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 21/191 (10%) Query: 21 IGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 IG +P P P +A +GR GK+SL+ ++L R++ GR+ N + +D N Sbjct: 70 IGFVPDGNPATPLVALAGREKCGKTSLL------RSLFRSAREVGRS---NRHLRRDAMN 120 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC--RHGVKQ 136 N +VD+PG G P V L+ + + +L+ +Y +D +HG+ Sbjct: 121 FFNVGGVFNVVDLPGCGGTSVPWSTVLQHAVLLRNFARCQPSLKMLYYCMDTHYKHGLYI 180 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSP----TTAQETLEKTKYLIRNYPTAHPEVIPTS 192 D D+ FL ++ ++ IVLTK D+++ T E + K LI Y H V+ TS Sbjct: 181 QDIDLLQFLAREVPNFTIVLTKADQINDRAIRTVHMEDIRKE--LI--YHGIHHPVLVTS 236 Query: 193 SVKRKGIEVLR 203 + GI+ LR Sbjct: 237 AFHMGGIDTLR 247 >gi|221486788|gb|EEE25034.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 708 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 85/206 (41%), Gaps = 53/206 (25%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILV----------NRKNLARTSNAPGRTQHLNFF-- 71 LP G PE+AF GRSNVGKSSL+N L R +AR S PG T+ +N + Sbjct: 253 LPSLGLPEVAFLGRSNVGKSSLLNALCLYTQKKHRGRTRLEMARVSRRPGSTRSINLYEA 312 Query: 72 -------------------------------VP-KDFSNLKNNLPAMA--------LVDM 91 +P K + +P A D+ Sbjct: 313 FGGCASEGSLERKGKRSRTRKSTGHTTRDRQLPRKQQGKHPSGVPLTATGNRGLLLFADL 372 Query: 92 PGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PGYG+A+ VR Y+ +R+ LR +L+D R G++ D ++ +L ++V Sbjct: 373 PGYGFAQGLSGEESQQLSKNVRLYVEKRNELRLFLVLVDGRLGLQDHDAEMLRWLAAQSV 432 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKY 176 +V+TK D L + L + + Sbjct: 433 PTLLVVTKADCLGAKDLENLLNQLSF 458 >gi|254673589|emb|CBA09094.1| GTP-binding protein [Neisseria meningitidis alpha275] Length = 164 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 1/110 (0%) Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYGYA+ P+ W L+ YL +R L + L++D RH +K++D + F Sbjct: 32 PGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRP 91 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTSSVKRKGIE 200 I+L+K DKLS +TL + K L++ Y + V SS+K++GI+ Sbjct: 92 VHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFSSLKKQGID 141 >gi|146101235|ref|XP_001469063.1| hypothetical protein [Leishmania infantum] gi|134073432|emb|CAM72160.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 620 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%) Query: 21 IGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 IG +P P P +A +GR GK+SL+ ++L R++ GR+ N + +D N Sbjct: 70 IGFVPDGNPATPLVALAGRERCGKTSLL------RSLFRSAREVGRS---NRHLRRDAMN 120 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC--RHGVKQ 136 N +VD+PG G P V L+ + + +L+ +Y +D +HG+ Sbjct: 121 FFNVGGVFNVVDLPGCGGTSVPWSTVLQHAVLLRNFARCQPSLKMLYYCMDTHYKHGLYI 180 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D D+ FL ++ ++ IVLTK D+++ A + K LI Y H V+ TS+ Sbjct: 181 QDIDLLQFLAREVPNFTIVLTKADQINDRALRAVHMEDIRKELI--YHDIHHPVLVTSAF 238 Query: 195 KRKGIEVLR 203 G++ LR Sbjct: 239 HMGGVDTLR 247 >gi|322494400|emb|CBZ29702.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 775 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 28/163 (17%) Query: 15 LRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 L+ V + LP+ PE+ F G+ GKSSLI+ L++ L + G T+ L FF Sbjct: 68 LKNVETLTALPEGLHSFPEVCFIGKPGCGKSSLISCLLHNHRLGKAGATAGTTRLLQFFN 127 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYAR--------APKKNVDSWGGLIVRYLSERS--TLR 122 D A+ LVD PGYG R A + N S ++ RYL+ R+ L+ Sbjct: 128 VGD---------ALLLVDTPGYGAWRGREVGQRLAEQANAFS---ILFRYLTLRNGGNLK 175 Query: 123 CVYLLIDCRH----GVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 VY L++ + D+++ +FL ++ + + +VLTKID+ Sbjct: 176 RVYWLMESSARTPVSFQPRDEELLTFLSRERIPFSVVLTKIDR 218 >gi|154344861|ref|XP_001568372.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065709|emb|CAM43483.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 653 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 15/188 (7%) Query: 21 IGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 +G +P P P +A +GR GK+SL+ L SN R +NFF Sbjct: 97 VGFVPDGNPATPLVALAGRERCGKTSLLRALFRSPREVGRSNRHLRRDAMNFF------- 149 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC--RHGVKQ 136 N +VD+PG+G P V L+ + + +L+ +Y +D +HG+ Sbjct: 150 --NVGGVFNVVDLPGFGGTSVPWTAVLQHAVLLRNFSRCQPSLKMLYYCMDVHYKHGLYI 207 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVIPTSSVK 195 D D+ FL ++ ++ IVLTK D+++ + +++ + + + HP V+ TS+ Sbjct: 208 QDIDLLRFLAREVPNFTIVLTKADQINDRAIRTAHMDEIRKELLYHDIHHP-VLVTSAFH 266 Query: 196 RKGIEVLR 203 GI+ LR Sbjct: 267 MGGIDTLR 274 >gi|322503096|emb|CBZ38180.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 620 Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 17/189 (8%) Query: 21 IGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 IG +P P P +A +GR GK+SL+ ++L R++ GR+ N + +D N Sbjct: 70 IGFVPDGNPATPLVALAGRERCGKTSLL------RSLFRSAREVGRS---NRHLRRDAMN 120 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC--RHGVKQ 136 N +VD+PG G P V L+ + + +L+ +Y +D +HG+ Sbjct: 121 FFNVGGVFNVVDLPGCGGTSVPWSTVLQHAVLLRNFSRCQPSLKMLYYCMDTHYKHGLYI 180 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D D+ FL ++ ++ IVLTK D+++ A + K LI Y H V+ TS+ Sbjct: 181 QDIDLLQFLAREVPNFTIVLTKADQINDRALRAVHMEDIRKELI--YHDIHHPVLVTSAF 238 Query: 195 KRKGIEVLR 203 G++ LR Sbjct: 239 HMGGVDTLR 247 >gi|322411596|gb|EFY02504.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 120 Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 2/122 (1%) Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D+PGYGYA+ K WG +I YL+ R LR V L+D RH + D ++ FL Sbjct: 1 MDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHESSKEDVQMYEFLKYY 60 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + IV TK DK+ + K + T H I SSV R GI+ ILE Sbjct: 61 DIPVIIVATKADKIPRGKWNKHESMVKKTLGFDKTDH--FIIFSSVDRVGIDEAWDTILE 118 Query: 209 TI 210 + Sbjct: 119 YL 120 >gi|296110038|ref|YP_003616987.1| GTP-binding protein HSR1-related protein [Methanocaldococcus infernus ME] gi|295434852|gb|ADG14023.1| GTP-binding protein HSR1-related protein [Methanocaldococcus infernus ME] Length = 193 Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 25/191 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++ GRSNVGKS+L+ +L K + R PG T +N + K+++ LV Sbjct: 3 PKVVVVGRSNVGKSTLVRLLTGDKRV-RVGKRPGVTLRINEYELKNYT----------LV 51 Query: 90 DMPGYGYARA-PKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVK----------QI 137 DMPG+G+ + PK+ + IVRYL E + + +ID + ++ I Sbjct: 52 DMPGFGFIKGRPKEIEERVKDNIVRYLEENADQIATAIQIIDGKSFIEIVERWKDKEIPI 111 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVK 195 D ++F F+ + +S +V+ K+DK+ + L ++ P H ++P K Sbjct: 112 DIEMFDFITELKISPILVVNKMDKIKKNERDKILNSICEYLKMSPPWHQWKFIVPACLKK 171 Query: 196 RKGIEVLRKAI 206 +G++ +++ I Sbjct: 172 GEGLDEIKRLI 182 >gi|237832111|ref|XP_002365353.1| GTP-binding conserved hypothetical domain-containing protein [Toxoplasma gondii ME49] gi|211963017|gb|EEA98212.1| GTP-binding conserved hypothetical domain-containing protein [Toxoplasma gondii ME49] Length = 712 Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 53/206 (25%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILV----------NRKNLARTSNAPGRTQHLNFF-- 71 LP G PE+AF GRSNVGKSSL+N L R +AR S PG T+ +N + Sbjct: 257 LPSLGLPEVAFLGRSNVGKSSLLNALCLYTQKKHRGRTRLEMARVSRRPGSTRSINLYEA 316 Query: 72 -------------------------------VP-KDFSNLKNNLPAMA--------LVDM 91 +P K + +P A D+ Sbjct: 317 FGGCASEGSLERKGKRSRTRKSTGHTTRDRQLPRKQQGKHPSGVPLTATGNRGLLLFADL 376 Query: 92 PGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PGYG+ + VR Y+ +R+ LR +L+D R G++ D ++ +L ++V Sbjct: 377 PGYGFTQGLSGEESQQLSKNVRLYVEKRNELRLFMILVDGRLGLQDHDAEMLRWLATQSV 436 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKY 176 +V+TK D L + L + + Sbjct: 437 PTLLVVTKADCLGAKDLENLLNQLSF 462 >gi|221061197|ref|XP_002262168.1| GTPase [Plasmodium knowlesi strain H] gi|193811318|emb|CAQ42046.1| GTPase, putative [Plasmodium knowlesi strain H] Length = 703 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 12/155 (7%) Query: 28 GPPEIAFSGRSNVGKSSLIN------ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G EI GRSNVGKS+ + I VN + S G T+ +N + F N K Sbjct: 518 GVNEICILGRSNVGKSTFLRNFIKYLINVNEHANVKVSKNSGCTRSINLY---SFENGKK 574 Query: 82 NLPAMALVDMPGYGYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 L DMPG+GYA KK ++ + Y+ R+ + ++LID +++ID Sbjct: 575 K-KLFILTDMPGFGYAAGIGKKKMEFLRKNLEDYIFLRNQICLFFVLIDMSVDIQKIDVS 633 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + + K + ++++ TK DK S T A E LE K Sbjct: 634 IVDAIKKTNIPFRVICTKSDKFS-TKADERLEAIK 667 >gi|322411595|gb|EFY02503.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 73 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/47 (63%), Positives = 36/47 (76%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ PG+TQ FF Sbjct: 25 PQDDLPEIALAGRSNVGKSSFINSMLGRKNLARTSSKPGKTQLFKFF 71 >gi|308198154|ref|XP_001386880.2| predicted protein [Scheffersomyces stipitis CBS 6054] gi|149388890|gb|EAZ62857.2| predicted protein [Pichia stipitis CBS 6054] Length = 374 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 17/134 (12%) Query: 30 PEIAFSGRSNVGKSSLINILV---NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 PE+ G +NVGKSSL+N L+ + A S G T+ +N + N+ L Sbjct: 161 PEVLLLGHTNVGKSSLLNNLIVNSDASEYAYVSQRAGYTKTINCY------NIGRKL--- 211 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D PGYG K+ G +++ Y+S+R LR V++LID G + D + L Sbjct: 212 RVIDSPGYGQFGEAKQ-----GKVVLDYISKRHLLRRVFILIDSVEGFRVEDMQMMDHLI 266 Query: 147 KKAVSYQIVLTKID 160 + V +++V TK D Sbjct: 267 SEGVPFEVVFTKTD 280 >gi|207092003|ref|ZP_03239790.1| GTPase EngB [Helicobacter pylori HPKX_438_AG0C1] Length = 100 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 3/89 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTAEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF-S 66 Query: 74 KDFSNLKNNL-PAMALVDMPGYGYARAPK 101 + + +N L ++D+PG+GYA+ K Sbjct: 67 TTWEDKENALTTTFNVIDLPGFGYAKVSK 95 >gi|156103005|ref|XP_001617195.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148806069|gb|EDL47468.1| hypothetical protein, conserved [Plasmodium vivax] Length = 703 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%) Query: 28 GPPEIAFSGRSNVGKSSLIN------ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G EI GRSNVGKS+ + I VN + S G T+ +N + F N K Sbjct: 535 GVNEICILGRSNVGKSTFLRNFIKYLINVNEHATVKVSKNSGCTRSINLYA---FENGKK 591 Query: 82 NLPAMALVDMPGYGYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 L DMPG+GYA KK ++ + Y+ R+ + ++LID ++++D Sbjct: 592 K-KLFILTDMPGFGYAAGIGKKKMEFLMKNLEDYIFLRNQICLFFVLIDMSVDIQKVDVS 650 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + + K V ++++ TK DK S +A+E L+ K Sbjct: 651 IVDAIRKTNVPFRVICTKSDKFS-ASAEERLQAIK 684 >gi|225467670|ref|XP_002269560.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 193 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 9/71 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 132 PKDDRPEFAILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLINHFLVNK--------- 182 Query: 85 AMALVDMPGYG 95 + +VD+PGYG Sbjct: 183 SWYIVDLPGYG 193 >gi|297742908|emb|CBI35744.3| unnamed protein product [Vitis vinifera] Length = 96 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 9/71 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK PE A GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 35 PKDDRPEFAILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLINHFLVNK--------- 85 Query: 85 AMALVDMPGYG 95 + +VD+PGYG Sbjct: 86 SWYIVDLPGYG 96 >gi|149239376|ref|XP_001525564.1| hypothetical protein LELG_03492 [Lodderomyces elongisporus NRRL YB-4239] gi|146451057|gb|EDK45313.1| hypothetical protein LELG_03492 [Lodderomyces elongisporus NRRL YB-4239] Length = 379 Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 67/140 (47%), Gaps = 21/140 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNR-------KNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 PEI G +NVGKSSLIN L+ LA S G T+ +N F SN Sbjct: 172 PEILIMGHTNVGKSSLINNLLTPSKSWSRVDQLAYVSAKAGYTKSMNCF---RISN---- 224 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + +D PGYG K+ G +++ Y+ R L+ V LLID G + D + Sbjct: 225 --KLRFIDSPGYG-----KRGDLKQGEMVIEYIEHRKLLKKVLLLIDSVEGFRPEDTTII 277 Query: 143 SFLDKKAVSYQIVLTKIDKL 162 L K VS+ IV TK+D++ Sbjct: 278 DHLHKNGVSFDIVFTKMDEI 297 >gi|145627916|ref|ZP_01783717.1| GTP-binding protein [Haemophilus influenzae 22.1-21] gi|144979691|gb|EDJ89350.1| GTP-binding protein [Haemophilus influenzae 22.1-21] Length = 140 Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 49/89 (55%) Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 NL P LVD+PGYGYA P++ W + +YL +R L + +L+D RH +K + Sbjct: 3 NLFEVEPNCKLVDLPGYGYAAVPEQMKIQWQKSLGKYLQKRECLAGLVVLMDIRHPLKDL 62 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 DQ + + + ++LTK DKLS + Sbjct: 63 DQQMIEWAVSANLPILLLLTKADKLSQSA 91 >gi|47219183|emb|CAG11201.1| unnamed protein product [Tetraodon nigroviridis] Length = 229 Score = 61.6 bits (148), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 9/143 (6%) Query: 68 LNFFVPKDFSNLKNNL---PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 L+ FVP+ + N A +VD+PGYG+ RAPK +G ++ YL+ R+ L Sbjct: 84 LSVFVPQGHTKKMNFFRVGGAFTIVDVPGYGH-RAPK----DFGEMVEPYLNTRTNLVRT 138 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +LL+D G+++ D + Y VLTK+DK P T L + +I + T+ Sbjct: 139 FLLVDGSVGLQKADLIALEMCEDIRRPYVAVLTKVDKCGPRTLLTNLLDLQEVINKHTTS 198 Query: 185 -HPEVIPTSSVKRKGIEVLRKAI 206 P+ SS+ GI +LR I Sbjct: 199 CFPQAFLVSSLHFTGIYLLRCLI 221 >gi|258611696|ref|ZP_05711608.1| GTP-binding protein [Listeria monocytogenes FSL R2-503] gi|258605486|gb|EEW18094.1| GTP-binding protein [Listeria monocytogenes FSL R2-503] Length = 94 Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFS 77 P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF + K FS Sbjct: 19 PETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFIKLKKHFS 72 >gi|220932765|ref|YP_002509673.1| small GTP-binding protein [Halothermothrix orenii H 168] gi|219994075|gb|ACL70678.1| small GTP-binding protein [Halothermothrix orenii H 168] Length = 411 Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 25/189 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+A P IA GR NVGKS+LIN L N++ LA S+ PG T + K L L Sbjct: 5 PRANRPHIAVFGRRNVGKSTLINTLTNQE-LALVSDVPGTTTDPVY---KSMELLP--LG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDV 141 + ++D G +V S G L ++ E R+ L L+ID HG ++D+ Sbjct: 59 PVVMIDTAGI-------DDVGSLGKLRIKKTREVIRRTDL--AILVIDPFHGAGNYEKDL 109 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ L + +V+ KID++ Q+ L+K K L P I S+ GIE Sbjct: 110 YNKLQDNNIPVVVVINKIDRVK-GIKQDLLDKVKLLFGVTP------IKVSAHSGTGIEE 162 Query: 202 LRKAILETI 210 LR+ ++ + Sbjct: 163 LREVLVNRV 171 >gi|71407171|ref|XP_806072.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70869706|gb|EAN84221.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 478 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 43/208 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GR++ GKSSLIN ++N +A + G T +NF+ N+ N + LV Sbjct: 262 PEVAFVGRTSSGKSSLINAILN-ALIAPYGHLQGTTSSVNFY------NVANKV---MLV 311 Query: 90 DMPGYGY--------------------------ARAPKKNVDSWGGLIVRYLSERST--- 120 D PGYGY + +K +S G R + R++ Sbjct: 312 DCPGYGYYNPMETPALDAENAVAVMRAYIKTCAQHSTEKKRNSEGTKTNRDVGHRASYPK 371 Query: 121 --LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++ V++ + R GV++ D + +L+ AV + +VLTK D + T+ + Sbjct: 372 RPIKRVFVCVPSR-GVQKADTEYLDYLESLAVPFSVVLTKTDAAPIRFLARLADHTRCQL 430 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +Y E++ TSS++ GI+ ++ I Sbjct: 431 VHYKHC-KELMLTSSLRLAGIDKVQNLI 457 >gi|322827249|gb|EFZ31514.1| hypothetical protein TCSYLVIO_2176 [Trypanosoma cruzi] Length = 478 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 43/208 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GR++ GKSSLIN ++N +A + G T +NF+ N+ N + LV Sbjct: 262 PEVAFVGRTSSGKSSLINAILN-ALIAPYGHLQGTTSSVNFY------NVANKV---MLV 311 Query: 90 DMPGYGY--------------------------ARAPKKNVDSWGGLIVRYLSERST--- 120 D PGYGY + +K +S G R + R++ Sbjct: 312 DCPGYGYYNPMETPALDAENAVAVMRAYIKTCAQHSNEKKRNSEGTKTNRDVGHRASYPK 371 Query: 121 --LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++ V++ + R GV++ D + +L+ AV + +VLTK D + T+ + Sbjct: 372 RPIKRVFVCVPSR-GVQKADTEYLDYLESLAVPFSVVLTKTDAAPIRFLARLADHTRCQL 430 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +Y E++ TSS++ GI+ ++ I Sbjct: 431 VHYKHC-KELMLTSSLRLAGIDKVQNLI 457 >gi|229013685|ref|ZP_04170814.1| GTP-binding protein YihA [Bacillus mycoides DSM 2048] gi|229135315|ref|ZP_04264109.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST196] gi|229169212|ref|ZP_04296926.1| GTP-binding protein YihA [Bacillus cereus AH621] gi|228614278|gb|EEK71389.1| GTP-binding protein YihA [Bacillus cereus AH621] gi|228648138|gb|EEL04179.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST196] gi|228747607|gb|EEL97481.1| GTP-binding protein YihA [Bacillus mycoides DSM 2048] Length = 128 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 47/90 (52%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R+ L L++D RH + D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGRMIETYFTTRTQLDAAVLVVDLRHQPTKDDIMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 61 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 90 >gi|229019694|ref|ZP_04176501.1| GTP-binding protein YihA [Bacillus cereus AH1273] gi|228741601|gb|EEL91794.1| GTP-binding protein YihA [Bacillus cereus AH1273] Length = 128 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 46/90 (51%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH + D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTKDDVMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 61 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 90 >gi|229025933|ref|ZP_04182325.1| GTP-binding protein YihA [Bacillus cereus AH1272] gi|228735379|gb|EEL85982.1| GTP-binding protein YihA [Bacillus cereus AH1272] Length = 129 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 46/90 (51%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH + D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTKDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 91 >gi|229062164|ref|ZP_04199488.1| GTP-binding protein YihA [Bacillus cereus AH603] gi|228717147|gb|EEL68823.1| GTP-binding protein YihA [Bacillus cereus AH603] Length = 129 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 47/90 (52%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R+ L L++D RH + D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKTERAAWGRMIETYFTTRTQLDAAVLVVDLRHQPTKDDIMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 91 >gi|229032123|ref|ZP_04188100.1| GTP-binding protein YihA [Bacillus cereus AH1271] gi|228729179|gb|EEL80178.1| GTP-binding protein YihA [Bacillus cereus AH1271] Length = 129 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 45/90 (50%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTNDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 91 >gi|229163425|ref|ZP_04291376.1| GTP-binding protein YihA [Bacillus cereus R309803] gi|228619994|gb|EEK76869.1| GTP-binding protein YihA [Bacillus cereus R309803] Length = 129 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 45/90 (50%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTNDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 91 >gi|229175151|ref|ZP_04302667.1| GTP-binding protein YihA [Bacillus cereus MM3] gi|228608287|gb|EEK65593.1| GTP-binding protein YihA [Bacillus cereus MM3] Length = 128 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 45/90 (50%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTNDDVMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 61 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 90 >gi|229105108|ref|ZP_04235759.1| GTP-binding protein YihA [Bacillus cereus Rock3-28] gi|228678289|gb|EEL32515.1| GTP-binding protein YihA [Bacillus cereus Rock3-28] Length = 128 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 45/90 (50%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTNDDVMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 61 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 90 >gi|229098943|ref|ZP_04229878.1| GTP-binding protein YihA [Bacillus cereus Rock3-29] gi|229117972|ref|ZP_04247332.1| GTP-binding protein YihA [Bacillus cereus Rock1-3] gi|228665421|gb|EEL20903.1| GTP-binding protein YihA [Bacillus cereus Rock1-3] gi|228684441|gb|EEL38384.1| GTP-binding protein YihA [Bacillus cereus Rock3-29] Length = 129 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 45/90 (50%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTNDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 91 >gi|229141210|ref|ZP_04269749.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST26] gi|228642251|gb|EEK98543.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST26] Length = 129 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + + EV+ SS G E KA Sbjct: 62 KHYDIPTIIIATKADKIPKGKWQKHLKVVKETLD--IESGDEVVLFSSETGLGKEEAWKA 119 Query: 206 I 206 I Sbjct: 120 I 120 >gi|147920219|ref|YP_686014.1| GTP-binding protein [uncultured methanogenic archaeon RC-I] gi|110621410|emb|CAJ36688.1| conserved GTP-binding protein [uncultured methanogenic archaeon RC-I] Length = 220 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 31/158 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F GRSNVGKS+++ L+ K + PG TQ N++ F +L + D Sbjct: 17 EIVFIGRSNVGKSTIMRELIGAK--VKVGRRPGVTQKPNYY---QFGDL-------LITD 64 Query: 91 MPGYGYA----RAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCR-----------HGV 134 MPGYGY RA ++ V LIV+Y + S + C ++D + G Sbjct: 65 MPGYGYMKGVDRAKQERVKD---LIVKYFEDNASRIICAVQVVDAKAFAEIVDRWDGRGE 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE 172 ID ++ FL + + + K+DK+ P+ E L+ Sbjct: 122 IPIDIELNDFLYDLDLDVIVAVNKMDKIHPSAWDEFLD 159 >gi|228935788|ref|ZP_04098600.1| GTP-binding protein YihA [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948183|ref|ZP_04110467.1| GTP-binding protein YihA [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229186711|ref|ZP_04313869.1| GTP-binding protein YihA [Bacillus cereus BGSC 6E1] gi|228596724|gb|EEK54386.1| GTP-binding protein YihA [Bacillus cereus BGSC 6E1] gi|228811541|gb|EEM57878.1| GTP-binding protein YihA [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823845|gb|EEM69665.1| GTP-binding protein YihA [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 128 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + + EV+ SS G E KA Sbjct: 61 KHYDIPTIIIATKADKIPKGKWQKHLKVVKETLD--IESGDEVVLFSSETGLGKEEAWKA 118 Query: 206 I 206 I Sbjct: 119 I 119 >gi|303244648|ref|ZP_07330980.1| GTP-binding protein HSR1-related protein [Methanothermococcus okinawensis IH1] gi|302484956|gb|EFL47888.1| GTP-binding protein HSR1-related protein [Methanothermococcus okinawensis IH1] Length = 218 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 25/156 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++ GRSNVGKS+L+ L+ +KN+ R PG T +N K ++ LV Sbjct: 25 PQVIVVGRSNVGKSTLVR-LITKKNV-RVGKKPGVTLKIN----------KYDMGNYILV 72 Query: 90 DMPGYGYARAPKKNV-DSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQ-------- 139 D+PG+G+ V D IV+Y+ + + + C +LID + + +D+ Sbjct: 73 DLPGFGFMTGLDDKVQDKIKDEIVKYIEDNKEKIACSIILIDAKAFPEIVDRWDKRDEIP 132 Query: 140 ---DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE 172 ++F FL++ ++ I++ K+DK+ E L+ Sbjct: 133 IDIEMFDFLNELKLNPIILINKMDKIKKNLWDEHLD 168 >gi|308811190|ref|XP_003082903.1| putative endonuclease (ISS) [Ostreococcus tauri] gi|116054781|emb|CAL56858.1| putative endonuclease (ISS) [Ostreococcus tauri] Length = 820 Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 8/118 (6%) Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYG+A AP+ + W YL +R TL V LLID +++D + +L Sbjct: 2 VDLPGYGFANAPEALREKWAEFTREYLLKRETLITVMLLIDSTVKPQRLDLECLDWLGAA 61 Query: 149 AVSYQIVLTKIDKLSPTTA------QETLEK-TKYLIRNYPTAH-PEVIPTSSVKRKG 198 + IV TK+DK A QET+E+ + + N+ P +I TSS +G Sbjct: 62 GIPVTIVFTKVDKRKKIAAGKRANPQETMEEFCREAMDNWDWDELPPMIYTSSETAEG 119 >gi|229006806|ref|ZP_04164439.1| GTP-binding protein YihA [Bacillus mycoides Rock1-4] gi|228754428|gb|EEM03840.1| GTP-binding protein YihA [Bacillus mycoides Rock1-4] Length = 128 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 45/90 (50%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGRMIETYFTTREQLDAAVLVVDLRHPPTNDDVMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 61 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 90 >gi|228999259|ref|ZP_04158839.1| GTP-binding protein YihA [Bacillus mycoides Rock3-17] gi|228760456|gb|EEM09422.1| GTP-binding protein YihA [Bacillus mycoides Rock3-17] Length = 129 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 45/90 (50%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKTERAAWGRMIETYFTTREQLDAAVLVVDLRHPPTNDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I+ TK DK+ Q+ L+ K Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVK 91 >gi|256811213|ref|YP_003128582.1| GTP-binding protein HSR1-related [Methanocaldococcus fervens AG86] gi|256794413|gb|ACV25082.1| GTP-binding protein HSR1-related [Methanocaldococcus fervens AG86] Length = 215 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 24/163 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GRSNVGKS+ + ++ RK++ + PG T +N + ++ LVDMPG+G Sbjct: 27 GRSNVGKSTFVRLITGRKDV-KVGKKPGVTLKINEY----------DMGEYILVDMPGFG 75 Query: 96 Y-ARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCR-----------HGVKQIDQDVF 142 Y A PKK + IV Y+ + + +ID + G ID ++F Sbjct: 76 YMAGLPKKIQEKIKDEIVHYIENHADEIAAAVQIIDAKAFFEIVERWEERGEIPIDLEMF 135 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 F+ +S +V K+DK+ E L+ ++ P H Sbjct: 136 DFITDLKISPILVANKMDKIKKEEWDEVLDGICEYLKCQPPWH 178 >gi|39974085|ref|XP_368433.1| hypothetical protein MGG_00811 [Magnaporthe oryzae 70-15] gi|145018253|gb|EDK02532.1| hypothetical protein MGG_00811 [Magnaporthe oryzae 70-15] Length = 562 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 75/198 (37%), Gaps = 69/198 (34%) Query: 30 PEIAFSGRSNVGKSSLINILVNR----------------------KNLARTSNAPGRTQH 67 PEI GRSNVGKS++IN + LA TS G TQ Sbjct: 120 PEICLLGRSNVGKSTMINGIAGMHPSKTGNVDKTLAKKGSGDWGIAGLAVTSRKAGCTQT 179 Query: 68 LNFF----------------VPKDFS--------------------------NLKNNLPA 85 LN + P++ N + + + Sbjct: 180 LNCYGFGPAPSIQVRGCELLQPQETEGAEAARGAVGGRSRSEVREDAKERAKNRERHNHS 239 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + ++DMPGYG+ + D WG IV+Y+ +R L+ LLID G K+ D+ L Sbjct: 240 LYIMDMPGYGH-----NSRDEWGNEIVKYIQKRKMLKGAVLLIDAAAGFKEGDRVTLQLL 294 Query: 146 DKKAVSYQIVLTKIDKLS 163 V +VLTK +K + Sbjct: 295 RDAQVRTLVVLTKANKAA 312 >gi|71421337|ref|XP_811776.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70876479|gb|EAN89925.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 478 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 43/208 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GR++ GKSSLIN ++N +A + G T +NF+ N+ N + LV Sbjct: 262 PEVAFVGRTSSGKSSLINAILN-ALIAPYGHLQGTTSSVNFY------NVANKV---MLV 311 Query: 90 DMPGYGY---ARAPKKNVDSWGGLIVRYL---SERST----------------------- 120 D PGYGY P + ++ ++ Y+ ++ ST Sbjct: 312 DCPGYGYYNPMETPALDAENAVAVMRAYIKTCAQHSTEKKRNSEGTKTNGDVGHRASYSK 371 Query: 121 --LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++ V++ + R GV++ D + +L+ AV + +VLTK D + T+ + Sbjct: 372 RPIKRVFVCVPSR-GVQKADTEYLDYLESLAVPFSVVLTKTDAAPIRFLARLADHTRCQL 430 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +Y E++ TSS++ GI+ ++ I Sbjct: 431 VHYKHC-KELMLTSSLRLAGIDKVQNLI 457 >gi|325294541|ref|YP_004281055.1| GTP-binding protein engA [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064989|gb|ADY72996.1| GTP-binding protein engA [Desulfurobacterium thermolithotrophum DSM 11699] Length = 478 Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 21/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I+ GR NVGKSSL N L+ +K +A + PG T+ D + K L V Sbjct: 5 PVISIVGRPNVGKSSLFNRLLEKK-VAIIDDTPGVTRD-RIVQEADIDDHKVILVDTGGV 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G+A+ + R + E + ++D + G+ +D++V L K Sbjct: 63 DTSGEGFAKETTEQAK-------RAMEEAD---IIVFVVDGKEGITPLDEEVAKILRKWK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + KID + +E Y Y PEVIP S++ + GI L++ ILE Sbjct: 113 KPIIVAVNKID-------EPYMEDLIY--DAYRLGFPEVIPISTIHKIGIPTLKERILEL 163 Query: 210 I 210 + Sbjct: 164 L 164 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 11/178 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR N+GKS+L+N LV + A S+ PG T+ ++ + ++ Sbjct: 220 PIKVAIVGRPNMGKSTLLNALVGEER-AIVSDIPGTTRD----AIDTYAKIGDD--EFIF 272 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G R K+++ + L R L V LL+D G D + K Sbjct: 273 IDTAGI-RRRGKIKDIEYYSYL--RALDAIDRADVVVLLVDAEEGPTDRDTKISGIALDK 329 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + KIDKL E L + L ++ P V S+ ++KG+E L K I Sbjct: 330 FKPIIIAVNKIDKLQNQKEWERLHRELDLNFDFIPYAPRVF-ISAKEKKGLEELIKQI 386 >gi|27497785|gb|AAO13002.1| putative GTP-binding protein [Pseudomonas fluorescens] Length = 81 Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L + +LARTS PGRTQ LNFF Sbjct: 16 FMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTH-ASLARTSKTPGRTQLLNFFKL 74 Query: 74 KD 75 D Sbjct: 75 DD 76 >gi|261403536|ref|YP_003247760.1| GTP-binding protein HSR1-releated protein [Methanocaldococcus vulcanius M7] gi|261370529|gb|ACX73278.1| GTP-binding protein HSR1-releated protein [Methanocaldococcus vulcanius M7] Length = 216 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 26/191 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GRSNVGKS+ + ++ RK++ + PG T +N + +L LVD+PG+G Sbjct: 27 GRSNVGKSTFVRLMTGRKDV-KVGKRPGLTLKINEY----------DLGDYILVDLPGFG 75 Query: 96 YARAPKKNV-DSWGGLIVRYLSERST-LRCVYLLIDCR-----------HGVKQIDQDVF 142 Y KNV + IV Y+ + + +ID + G ID ++F Sbjct: 76 YMSGLPKNVQEKIKDEIVHYIENNADKIATAVQIIDAKSFFEIVRRWDERGEIPIDLEMF 135 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIE 200 F+ +S +V+ K+DK+ L+ + P ++P K +GI+ Sbjct: 136 DFITDLKISPILVVNKMDKIKKEDWDTVLDGICEFFKCSPPWRQWKFIVPAVLKKGQGID 195 Query: 201 VLRKAILETIN 211 ++K I E ++ Sbjct: 196 EIKKRIKERVD 206 >gi|296005001|ref|XP_002808841.1| GTPase, putative [Plasmodium falciparum 3D7] gi|225632236|emb|CAX64118.1| GTPase, putative [Plasmodium falciparum 3D7] Length = 657 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 16/176 (9%) Query: 28 GPPEIAFSGRSNVGKSSLIN------ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G EI GRSNVGKS+ + + +N + S G T+ +N + F N K Sbjct: 473 GVNEICILGRSNVGKSTFLRNFIRYLLKINENKDIKVSKNSGCTRSINLY---SFENEKR 529 Query: 82 NLPAMALVDMPGYGYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + DMPG GYA KK +D + Y+ R+ + ++LID V++ID Sbjct: 530 K-RLFIITDMPGLGYAEGIGKKKMDYLRKNLDDYIFLRNQICLFFILIDMSVDVQRIDLS 588 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + + + V ++++ TK DK LE I+N+ IP S + Sbjct: 589 LVDMIKRTNVPFRVICTKSDKYDS-----NLEGRLNAIKNFYNLDKIPIPISKFSK 639 >gi|228917107|ref|ZP_04080665.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929516|ref|ZP_04092535.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229093566|ref|ZP_04224667.1| GTP-binding protein YihA [Bacillus cereus Rock3-42] gi|229124009|ref|ZP_04253201.1| GTP-binding protein YihA [Bacillus cereus 95/8201] gi|229198598|ref|ZP_04325300.1| GTP-binding protein YihA [Bacillus cereus m1293] gi|228584880|gb|EEK42996.1| GTP-binding protein YihA [Bacillus cereus m1293] gi|228659311|gb|EEL14959.1| GTP-binding protein YihA [Bacillus cereus 95/8201] gi|228689775|gb|EEL43581.1| GTP-binding protein YihA [Bacillus cereus Rock3-42] gi|228830095|gb|EEM75713.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842525|gb|EEM87615.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 125 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDFLKHY 60 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I+ TK DK+ Q+ L+ K + + EV+ SS G E KAI Sbjct: 61 DIPTIIIATKADKIPKGKWQKHLKVVKETLD--IESGDEVVLFSSETGLGKEEAWKAI 116 >gi|256828007|ref|YP_003156735.1| small GTP-binding protein [Desulfomicrobium baculatum DSM 4028] gi|256577183|gb|ACU88319.1| small GTP-binding protein [Desulfomicrobium baculatum DSM 4028] Length = 445 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 17/175 (9%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G +IA GR N GKSS IN L+ +K L ++ A ++ V + Sbjct: 179 GGLKIALLGRPNAGKSSTINALLGKKRLMVSAEAGTTRDCVDVTVQR-------GGKTYT 231 Query: 88 LVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R K +DS +V + V L++D GV D+ + SFLD Sbjct: 232 FVDTAG---VRRKSKVIDSLEYFSVVHSMQAAKQADVVVLVLDIMDGVVGQDKRLLSFLD 288 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKY-LIRNYP-TAHPEVIPTSSVKRKGI 199 + V + IV+ KID LS ++ L KTK L+ + AH V+ +SSV G+ Sbjct: 289 TEKVPFVIVVNKIDLLS----KDQLAKTKKDLVDQFAFCAHVPVLYSSSVSMAGL 339 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 11/131 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L+ R+ ++ T + G T+ FS ++ L+ Sbjct: 6 PMVALIGRPNVGKSTLFNRLIKRR-VSITHDMAGVTRD------SIFSEVRGETRTYMLI 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + + + + ++D R G+ D+ V +L + Sbjct: 59 DTGGL----VPDSSDEIEISIFDQAREAMAGADLILFIVDGRTGLHPQDEQVGQYLRQSG 114 Query: 150 VSYQIVLTKID 160 ++++ K+D Sbjct: 115 KEVRVLVNKVD 125 >gi|282165547|ref|YP_003357932.1| GTP-binding protein [Methanocella paludicola SANAE] gi|282157861|dbj|BAI62949.1| GTP-binding protein [Methanocella paludicola SANAE] Length = 212 Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 27/195 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ F GRSNVGKS+L+ L+ K R PG TQ N++ F +L + D Sbjct: 17 EVVFIGRSNVGKSTLMRQLIGLK--VRVGKRPGVTQRPNYY---QFGDL-------LVTD 64 Query: 91 MPGYGYARAPK-KNVDSWGGLIVRYLSERS-TLRCVYLLIDCR-----------HGVKQI 137 MPGYGY + + LIV+Y + + + C ++D + G I Sbjct: 65 MPGYGYMKGVDYRKQHKLRDLIVKYFEDNAPRIVCAVQVVDAKSFSEVVDRWDGRGEVPI 124 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVK 195 D ++F+FL + + + K+D + L+ + P + + I S K Sbjct: 125 DLELFAFLRDLNIPVIVAVNKMDNIYDREKNMVLDDIALRLGFSPPWSGWMDRIAPISAK 184 Query: 196 RKGIEVLRKAILETI 210 + ++ LRK + + + Sbjct: 185 KGDVDHLRKLLKDKL 199 >gi|228987721|ref|ZP_04147832.1| GTP-binding protein YihA [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771995|gb|EEM20450.1| GTP-binding protein YihA [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 135 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDFLKHY 60 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I+ TK DK+ Q+ L+ K + + EV+ SS G E KAI Sbjct: 61 DIPTIIIATKADKIPKGKWQKHLKVVKETLD--IESGDEVVLFSSETGLGKEEAWKAI 116 >gi|71274603|ref|ZP_00650891.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Dixon] gi|71900907|ref|ZP_00683022.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Ann-1] gi|170730865|ref|YP_001776298.1| GTP-binding protein EngA [Xylella fastidiosa M12] gi|238687938|sp|B0U489|DER_XYLFM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71164335|gb|EAO14049.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Dixon] gi|71729319|gb|EAO31435.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Ann-1] gi|167965658|gb|ACA12668.1| GTP-binding protein [Xylella fastidiosa M12] Length = 465 Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + + P A+V Sbjct: 3 PLVALVGRPNVGKSTLFNALTLTRD-ALVHDQPGVTRDRHYGVCR-----IDGQPLFAVV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G D G R + V +++ R G +D D+ ++L K Sbjct: 57 DTGGM------VGKEDGLAGATARQARLAAAEADVVLFVVNVREGASALDDDILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V+ KID +S TT + +V+P S+ R+G++ L + +L Sbjct: 111 SQPTLLVINKIDGVSDTTVHSEFAHYGF---------SDVVPVSAAHRQGLDDLIEQVL 160 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 16/198 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 AW+ R + E L + IAF GR NVGKS+L+N L+ + + S+ PG T+ Sbjct: 161 AWLPERSIGE-ALNEDSERIHIAFVGRPNVGKSTLVNRLLGEERMI-VSDVPGTTR---- 214 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 +L+ + LVD G ++ V+ + + L + LL+D Sbjct: 215 --DSITVDLERDEFRYRLVDTAGLRRKSKVEEAVEKFSAF--KTLQAIEQCQVAVLLLDA 270 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEV 188 GV D V + + + + + K D L+ + E L K N+ EV Sbjct: 271 GEGVTDQDATVLAAILDAGKALVVAMNKWDGLATYQREQAEDLLSRKLGFVNW----AEV 326 Query: 189 IPTSSVKRKGIEVLRKAI 206 + S+ G+ L +AI Sbjct: 327 VRLSAKHGSGLRELFRAI 344 >gi|68076037|ref|XP_679938.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56500794|emb|CAH95065.1| conserved hypothetical protein [Plasmodium berghei] Length = 242 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 25/150 (16%) Query: 28 GPPEIAFSGRSNVGKSSLIN------ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G EI GRSNVGKS+ + I VN + S G T+ +N + F N K Sbjct: 57 GVNEICILGRSNVGKSTFLRNFIKYLINVNDNKNIKVSKRSGCTRSINLY---SFENAKK 113 Query: 82 NLPAMALVDMPGYGYARAP--------KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L DMPG GYA KKN+D + L R+ + ++LID Sbjct: 114 K-KLFILTDMPGLGYAEGIGEKKMEYLKKNLDDYVYL-------RNQICLFFILIDMSVD 165 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +++ID + + K ++ +++ TK DK + Sbjct: 166 IQKIDISLMDAIRKTSIPLRVICTKCDKFN 195 >gi|160942963|ref|ZP_02090201.1| hypothetical protein FAEPRAM212_00440 [Faecalibacterium prausnitzii M21/2] gi|158445657|gb|EDP22660.1| hypothetical protein FAEPRAM212_00440 [Faecalibacterium prausnitzii M21/2] gi|295103496|emb|CBL01040.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii SL3/3] Length = 447 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 81/188 (43%), Gaps = 29/188 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ LA + PG T+ + F+N + N LV Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQR-LAIVEDTPGITR------DRIFANCEWNGHEFLLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G PK I+ ++ E++ T C+ ++ D R+G+ D+DV Sbjct: 57 DTGGI----EPKATEG-----ILAHMREQAQIAIDTADCIIMVTDVRNGLTAADEDVAHM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + + K DK+ E L Y EV+P SSV G L Sbjct: 108 LRRSHKPIILAVNKCDKVG--------EAPMELYEFYNLGFDEVMPISSVHGHGTGDLLD 159 Query: 205 AILETINY 212 A+ +++ Sbjct: 160 AVCAHLDF 167 >gi|15837067|ref|NP_297755.1| GTP-binding protein EngA [Xylella fastidiosa 9a5c] gi|26006743|sp|Q9PG37|DER_XYLFA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|9105311|gb|AAF83275.1|AE003896_12 GTP-binding protein [Xylella fastidiosa 9a5c] Length = 465 Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + + P A+V Sbjct: 3 PLVALVGRPNVGKSTLFNALTLTRD-ALVHDQPGVTRDRHYGVCR-----IDGQPLFAVV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G D G R + V +++ R GV +D D+ ++L K Sbjct: 57 DTGGM------VGKEDGLAGATARQARLAAAEADVVLFVVNVREGVSALDDDILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V+ KID +S T + +V+P S+ R+G++ L + +L Sbjct: 111 SQPTLLVINKIDGVSDATVHSEFAHYGF---------SDVVPVSAAHRQGLDDLIEQVL 160 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 16/198 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 AW+ RG+ E L + IAF GR NVGKS+L+N L+ + + S+ PG T+ Sbjct: 161 AWLPERGIGE-ALDEDSERIHIAFVGRPNVGKSTLVNRLLGEERMI-VSDVPGTTR---- 214 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 +L+ + LVD G ++ V+ + + E+ + LL+D Sbjct: 215 --DSITVDLERDECRYRLVDTAGLRRKSKVEEAVEKFSAFKTLQVIEQC--QVAVLLLDA 270 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEV 188 GV D V + + + + + K D L + E L K N+ EV Sbjct: 271 GEGVTDQDATVLAAILDAGKALVVAMNKWDGLGTYQREQAEDLLSRKLGFVNW----AEV 326 Query: 189 IPTSSVKRKGIEVLRKAI 206 + S+ G+ L +AI Sbjct: 327 VRLSAKHGSGLRELFRAI 344 >gi|288932595|ref|YP_003436655.1| GTP-binding protein HSR1-related protein [Ferroglobus placidus DSM 10642] gi|288894843|gb|ADC66380.1| GTP-binding protein HSR1-related protein [Ferroglobus placidus DSM 10642] Length = 192 Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 34/186 (18%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F+GRSNVGKS+L L K R PG T N +D + + D Sbjct: 9 EIIFAGRSNVGKSTLFYQLFGVK--VRRGKKPGTTIKPNHLQYRD----------LLVTD 56 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDC-----------RHGVKQID 138 +PG+GY + + +VRY+ E + ++ +ID + G ++ Sbjct: 57 LPGFGYVWKGRNLSEKVKDFVVRYIEENAHRIKLAVEVIDAKAFCEIAERWDKRGYIPVE 116 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++F FL + + + K DK+ + E + K E+IPTS+ K+ Sbjct: 117 VEMFDFLKELGIETVVAANKFDKVENESVIEEIRK---------WIKGEIIPTSA-KKGE 166 Query: 199 IEVLRK 204 +E +R+ Sbjct: 167 VEGIRR 172 >gi|28199496|ref|NP_779810.1| GTP-binding protein EngA [Xylella fastidiosa Temecula1] gi|182682229|ref|YP_001830389.1| GTP-binding protein EngA [Xylella fastidiosa M23] gi|32129520|sp|Q87B41|DER_XYLFT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238691082|sp|B2I7V0|DER_XYLF2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|28057611|gb|AAO29459.1| GTP-binding protein [Xylella fastidiosa Temecula1] gi|182632339|gb|ACB93115.1| small GTP-binding protein [Xylella fastidiosa M23] gi|307578503|gb|ADN62472.1| GTP-binding protein EngA [Xylella fastidiosa subsp. fastidiosa GB514] Length = 465 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + + P A+V Sbjct: 3 PLVALVGRPNVGKSTLFNALTLTRD-ALVHDQPGVTRDRHYGVCR-----IDGQPLFAVV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G D G R + V +++ R G +D D+ ++L K Sbjct: 57 DTGGM------VGKEDGLAGATARQARLAVAEADVVLFVVNVREGASALDDDILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V+ KID +S TT + +V+P S+ R+G++ L + +L Sbjct: 111 SQPTLLVINKIDGVSDTTVHSEFAHYGF---------SDVVPVSAAHRQGLDDLIEQVL 160 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 15/177 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IAF GR NVGKS+L+N L+ + + S+ PG T+ + V + L+ LVD Sbjct: 181 IAFVGRPNVGKSTLVNRLLGEERMI-VSDVPGTTRD-SITVDLERDELRYR-----LVDT 233 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ V+ + + L + LL+D GV D V + + + Sbjct: 234 AGLRRKSKVEEAVEKFSAF--KTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKA 291 Query: 152 YQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K D L+ + E L K N+ EV+ S+ G+ L +AI Sbjct: 292 LVVAMNKWDGLATYQREQAEDLLSRKLGFVNW----AEVVRLSAKHGSGLRELFRAI 344 >gi|71898142|ref|ZP_00680328.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Ann-1] gi|71732116|gb|EAO34172.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Ann-1] Length = 465 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + + P A+V Sbjct: 3 PLVALVGRPNVGKSTLFNALTLTRD-ALVHDQPGVTRDRHYGVCR-----IDGQPLFAVV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL-LIDCRHGVKQIDQDVFSFLDKK 148 D G D G R + V L +++ R G +D D+ ++L K Sbjct: 57 DTGGM------VGKEDGLAGATARQARLAAAEADVLLFVVNVREGASALDDDILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V+ KID +S TT + +V+P S+ R+G++ L + +L Sbjct: 111 SQPTLLVINKIDGVSDTTVHSEFAHYGF---------SDVVPVSAAHRQGLDDLIEQVL 160 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 15/177 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IAF GR NVGKS+L+N L+ + + S+ PG T+ +L+ + LVD Sbjct: 181 IAFVGRPNVGKSTLVNRLLGEERMI-VSDVPGTTR------DSITVDLERDEFRYRLVDT 233 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ V+ + + L + LL+D GV D V + + + Sbjct: 234 AGLRRKSKVEEAVEKFSAF--KTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAILDAGKA 291 Query: 152 YQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K D L+ + E L K N+ EV+ S+ G+ L +AI Sbjct: 292 LVVAMNKWDGLATYQREQAEDLLSRKLGFVNW----AEVVRLSAKHGSGLRELFRAI 344 >gi|313114942|ref|ZP_07800438.1| ribosome-associated GTPase EngA [Faecalibacterium cf. prausnitzii KLE1255] gi|310622735|gb|EFQ06194.1| ribosome-associated GTPase EngA [Faecalibacterium cf. prausnitzii KLE1255] Length = 447 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 29/188 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ LA + PG T+ + F+N + N LV Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQR-LAIVEDTPGITRD------RIFANCEWNGHDFLLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G PK I+ ++ E++ T C+ +++D R G+ D+DV Sbjct: 57 DTGGI----EPKATEG-----ILAHMREQAQIAIDTADCIIMVVDVRDGLTAADEDVAHM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + + K DK+ +E ++ Y EV+P SSV G L Sbjct: 108 LRRSHKPIILAVNKCDKV----GDAPMEMYEF----YNLGFDEVMPISSVHGHGTGDLLD 159 Query: 205 AILETINY 212 A+ +++ Sbjct: 160 AVCAHLDF 167 >gi|13124176|sp|O57939|ENGB_PYRHO RecName: Full=Probable GTP-binding protein EngB Length = 216 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 37/209 (17%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P I L+P A I F+GRSNVGKS+LI L +K R PG T+ + + ++ N Sbjct: 20 PIILLIPMAT---IIFAGRSNVGKSTLIYRLTGKK--VRRGKRPGVTRKI---IEIEWKN 71 Query: 79 LKNNLPAMALVDMPGYGYARA-PKKNVDSWGGLIVRYLSERS-TLRCVYLLIDC------ 130 K ++DMPG+G+ PK+ + IV ++ + + + L++D Sbjct: 72 HK-------IIDMPGFGFMMGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEI 124 Query: 131 -----RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 + G ID + + FL + + + + K+DK+ QE + +L + Sbjct: 125 IKRWEKRGEIPIDVEFYQFLRELDIPTIVAVNKLDKIK--NVQEVI---NFLAEKFEVPL 179 Query: 186 PEV----IPTSSVKRKGIEVLRKAILETI 210 E+ IP S+ IE L+ I E I Sbjct: 180 SEIDKVFIPISAKFGDNIERLKNRIFEVI 208 >gi|258404637|ref|YP_003197379.1| GTP-binding protein EngA [Desulfohalobium retbaense DSM 5692] gi|257796864|gb|ACV67801.1| ribosome-associated GTPase EngA [Desulfohalobium retbaense DSM 5692] Length = 441 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 11/131 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L+ RK A T + PG T+ + ++ + + P ALV Sbjct: 3 PTVALIGRRNVGKSTLFNRLI-RKQKALTHDRPGVTRD------RLYAEVPHGEPPFALV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + D + R E + L + ++D R GV ID+ + +FL + Sbjct: 56 DTGGLVLDESDGVEADVFEQ--AREAMEGAQL--ILFVVDGRQGVSTIDEQLAAFLRQTD 111 Query: 150 VSYQIVLTKID 160 ++V+ K+D Sbjct: 112 KPVRLVINKVD 122 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 15/170 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSLIN LV K L + A T ++ K + + Sbjct: 184 LALLGRPNVGKSSLINALVGEKRLVVSPEAGTTTDIVDVLFEK---------KGKRYIFL 234 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R K + ++R L + L +D GV D+ + SFLD++ + Sbjct: 235 DSAGVRRRSKIDDSLERFSVLRALRNSKRAQVTVLCLDALQGVVGQDKKLLSFLDREKIP 294 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGI 199 + + + K+D L P+ + L + K N +H I TS+V + G+ Sbjct: 295 FIVAVNKVD-LVPS---DRLGQLKKYFENELRFLSHVPRIYTSAVSKAGL 340 >gi|76800940|ref|YP_325948.1| GTP-binding protein [Natronomonas pharaonis DSM 2160] gi|119369220|sp|Q3IU04|ENGB_NATPD RecName: Full=Probable GTP-binding protein EngB gi|76556805|emb|CAI48379.1| probable GTP-binding protein [Natronomonas pharaonis DSM 2160] Length = 206 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 26/191 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI GRSNVGKS+L+ + + A T +PG T N + D++ + D Sbjct: 11 EIVLVGRSNVGKSTLMREITGHDSFA-TGGSPGVTTKPNHY---DWAG-----DDFVITD 61 Query: 91 MPGYGYARAPKKNV-DSWGGLIVRYLSERS----------TLRCVYLLIDCRHGVKQIDQ 139 +PG+G+ ++V +S +V+Y+ + + V +ID G +I Sbjct: 62 LPGFGFMSGVPEDVRESIKRDVVQYIEAHADNILAGILVVDGKAVVDIIDRHSGPDEIPH 121 Query: 140 DV--FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVK 195 DV F FL + + + + K+DK+ E L++ + YP E++ S K Sbjct: 122 DVEMFGFLQELGIPTVVAVNKMDKVD--DRDERLDELAERLGLYPPWQQFDEMLAPISAK 179 Query: 196 RKGIEVLRKAI 206 R IE L +A+ Sbjct: 180 RGSIEPLNQAV 190 >gi|295100402|emb|CBK97947.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii L2-6] Length = 447 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 29/188 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ LA + PG T+ + F+N + + LV Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQR-LAIVEDTPGITRD------RIFANCEWSGHEFLLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G PK I+ ++ E++ T C+ +++D R+G+ D+DV Sbjct: 57 DTGGI----EPKATEG-----ILAHMREQAQIAIDTADCIIMVVDVRNGLTAADEDVAHM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + + K D + T + L Y EV+P SSV G L Sbjct: 108 LRRSHKPIILAVNKCDNVGETPME--------LYEFYNLGFDEVMPISSVHGHGTGDLLD 159 Query: 205 AILETINY 212 A+ +++ Sbjct: 160 AVCAHLDF 167 >gi|327400921|ref|YP_004341760.1| GTP-binding protein HSR1-like protein [Archaeoglobus veneficus SNP6] gi|327316429|gb|AEA47045.1| GTP-binding protein HSR1-related protein [Archaeoglobus veneficus SNP6] Length = 197 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 30/156 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F GRSNVGKS+L + L +K R PG T NF +D + + D Sbjct: 9 EIIFVGRSNVGKSTLFSALFGKK--VRKGKKPGTTIKPNFLQYRD----------LLITD 56 Query: 91 MPGYGYARAPKKNVDSW-GGLIVRYLSERSTLRCVYL-LIDCR-----------HGVKQI 137 +PGYGY R ++ + IV Y+ + V + +ID + G + Sbjct: 57 LPGYGYIRGVNRDFNERVKDFIVHYIENNANRIIVSVHVIDAKAFPEVVERWESRGEIPV 116 Query: 138 DQDVFSFLDKKAVSYQIVLT-KIDKLSPTTAQETLE 172 D +++ FLD+ VS IV KIDK+ ETL+ Sbjct: 117 DIEMYEFLDE--VSNVIVAANKIDKVE--NVDETLD 148 >gi|160331570|ref|XP_001712492.1| engA [Hemiselmis andersenii] gi|159765940|gb|ABW98167.1| engA [Hemiselmis andersenii] Length = 519 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 26/184 (14%) Query: 24 LPKAGPP------EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKD 75 LPK P ++A G+ NVGKSS++N L N+K A S+ PG T+ +F Sbjct: 243 LPKISFPFSETSIKVAIIGKPNVGKSSILNFLTNKKR-AIVSDIPGTTRDSCDSFISGGS 301 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWG---GLIVRYLSERSTLRCVYLLIDCRH 132 SN+ N L+D G KK + +G +I R CV +ID Sbjct: 302 NSNIYN------LIDTAG-----IRKKKMIEYGPEFFMINRTFKAIQKCDCVLFVIDAST 350 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIP 190 G+ + DQ + + ++ S I+ K DK+S + + +K K LI+ P + +V+ Sbjct: 351 GITEQDQKLSERIQEQGKSCVIIFNKWDKIS-SKDKLNFQKFKLLIKRMLQPISWADVLF 409 Query: 191 TSSV 194 TS++ Sbjct: 410 TSAI 413 >gi|313680391|ref|YP_004058130.1| ribosome-associated GTPase enga [Oceanithermus profundus DSM 14977] gi|313153106|gb|ADR36957.1| ribosome-associated GTPase EngA [Oceanithermus profundus DSM 14977] Length = 433 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 30/179 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N L+ R++ A ++ G T+ L V ++ LVD Sbjct: 4 VVIVGRPNVGKSSLYNRLLGRRD-AVVADEAGVTRDLKEAV------VETERGKFKLVDT 56 Query: 92 PGY--GYARAP--KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 G G A P K+ VD R L+E V L+D R + Q D +V +L + Sbjct: 57 GGLWSGDAWEPKIKEKVD-------RALAEAD---LVLFLVDGRAELAQADYEVADYLRR 106 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K ++V TK+D + YL Y + IPTS R+G+E L AI Sbjct: 107 KNKPVRLVATKVDH---------PKHEAYLGELYALGFGDPIPTSVEHRRGLEELEDAI 156 >gi|72081087|ref|XP_795431.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115937302|ref|XP_001195163.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 160 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 59/138 (42%), Gaps = 35/138 (25%) Query: 2 VSHTIFTKSAWIFL---RGVPEIGLL-----------------PKAGP----PEIAFSGR 37 V H IF IF V E G+L P+ P PEIA GR Sbjct: 30 VQHPIFEDKDMIFRPTETEVQEAGMLFENGRTHKVQFAKAAYYPEQAPDYNLPEIAMIGR 89 Query: 38 SNVGKSSLINILV-NRKNLA-RTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 SNVGKSSLI L N L RTS PG T+ L F+ A +LVD+PGYG Sbjct: 90 SNVGKSSLIKALFSNVPGLTVRTSKTPGHTKLLLFYQAGS---------AFSLVDLPGYG 140 Query: 96 YARAPKKNVDSWGGLIVR 113 + + V + G L R Sbjct: 141 FRQPENFAVTAEGYLRTR 158 >gi|325290811|ref|YP_004266992.1| iron-only hydrogenase maturation protein HydF [Syntrophobotulus glycolicus DSM 8271] gi|324966212|gb|ADY56991.1| iron-only hydrogenase maturation protein HydF [Syntrophobotulus glycolicus DSM 8271] Length = 417 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 22/187 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK I+ GR N GKSSLIN L N +++A S+ PG T + K L P Sbjct: 5 PKGSRLHISLFGRRNAGKSSLINALTN-QDIALVSDVPGTTTDPVY---KAMEILPIG-P 59 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL---RCVYLLIDCRHGVKQIDQDV 141 M L+D G +V S G L VR R L L++D G ++++ Sbjct: 60 VM-LIDTAGL-------DDVGSLGELRVR--KSRQVLDKTDVTLLVVDSGTGFGDFEKNI 109 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPT---TAQETLEKTKYL-IRNYPTAHPEVIPTSSVKRK 197 + ++ + I+ KID ++ Q LE+T L ++N T+ P+ + SSV ++ Sbjct: 110 YDLCVERNIPVLIIFNKIDLINEDQKKALQNNLEQTYGLSLQNPQTSAPQALFVSSVTKE 169 Query: 198 GIEVLRK 204 GI L++ Sbjct: 170 GILQLKQ 176 >gi|257439162|ref|ZP_05614917.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii A2-165] gi|257198413|gb|EEU96697.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii A2-165] Length = 447 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 29/188 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ LA + PG T+ + F+N + + LV Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQR-LAIVEDTPGITRD------RIFANCEWSGHEFMLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G PK I+ ++ E++ T C+ +++D R G+ D++V Sbjct: 57 DTGGI----EPKATEG-----ILAHMREQAEIAIDTADCIIMVVDVRDGLTAADEEVAHM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + + K DK T + +E ++ Y EV+P SSV G L Sbjct: 108 LRRSHKPIILAVNKCDK----TGEAPMELYEF----YNLGFDEVLPISSVHGHGTGDLLD 159 Query: 205 AILETINY 212 A+ +++ Sbjct: 160 AVCAHLDF 167 >gi|157364503|ref|YP_001471270.1| small GTP-binding protein [Thermotoga lettingae TMO] gi|166920104|sp|A8F7S2|DER_THELT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157315107|gb|ABV34206.1| small GTP-binding protein [Thermotoga lettingae TMO] Length = 435 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 21/200 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 LR E +L K P+IA G+ NVGKSSL N L+N + A + PG T+ P Sbjct: 162 LLRESGEKSMLFKESSPKIAIVGKPNVGKSSLFNALLN-MDRATVTPVPGTTRD-----P 215 Query: 74 KDFSNLKNNLPAMALVDMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D ++ N LVD G +R +K ++ + I R + + V L+ID Sbjct: 216 VD-EMIEINGKKYILVDTAGMRRKSRIERKTIEQFS--ISRTIDTIQSADVVLLVIDATE 272 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY---LIRNYPTAH-PEV 188 GV + D+ + + + V+ K D ++ + K Y L P + + Sbjct: 273 GVTRQDKRIADLILSSGRAMVCVINKFDLVN-------VRKKDYEAALFTEMPFINFCRI 325 Query: 189 IPTSSVKRKGIEVLRKAILE 208 + TS+VK+ G+E L AI E Sbjct: 326 VFTSAVKKSGLEKLFNAIDE 345 >gi|294495917|ref|YP_003542410.1| GTP-binding protein HSR1-related protein [Methanohalophilus mahii DSM 5219] gi|292666916|gb|ADE36765.1| GTP-binding protein HSR1-related protein [Methanohalophilus mahii DSM 5219] Length = 207 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 25/162 (15%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +PK EI F+GRSNVGKSS++ L K + PG T P +++K Sbjct: 6 VPKNNDFEIVFAGRSNVGKSSIVKALSGSK--VKVGKRPGVT-----LKP---THVKKG- 54 Query: 84 PAMALVDMPGYGYARAPK-KNVDSWGGLIVRYLSE-RSTLRCVYLLIDC----------- 130 + + D+PG+G+ K + D IVRY+ E + + +++D Sbjct: 55 -ELVMTDLPGFGFMNGVKERKQDIVKDKIVRYIEEGKQRINIAAIVVDAGSFVEVVDRWD 113 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE 172 + G ID ++F F + + IV+ K+DK+ L+ Sbjct: 114 QRGELPIDIEIFDFFTEMDLEPLIVVNKMDKIKDKDQDRVLD 155 >gi|328950011|ref|YP_004367346.1| GTP-binding protein engA [Marinithermus hydrothermalis DSM 14884] gi|328450335|gb|AEB11236.1| GTP-binding protein engA [Marinithermus hydrothermalis DSM 14884] Length = 431 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 80/183 (43%), Gaps = 30/183 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N L+ R++ A ++ PG T+ L V ++ + LVD Sbjct: 4 VVIVGRPNVGKSSLYNRLLGRRD-AVVADEPGVTRDLKEAV------IETDRGRFKLVDT 56 Query: 92 PGY--GYARAPK--KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 G G A PK + VD R + + V L+D R Q D +V +L + Sbjct: 57 GGLWSGDAWEPKIQEKVD-------RAIQDAD---LVLFLVDGRADPTQADFEVADYLRR 106 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V TK+D P Q YL Y IPTS R+G++ L AI Sbjct: 107 QPTPVLLVATKVD--DPKHEQ-------YLGELYALGFGAPIPTSVEHRRGLDALVDAIW 157 Query: 208 ETI 210 E + Sbjct: 158 ERL 160 >gi|14590134|ref|NP_142198.1| GTP-binding protein [Pyrococcus horikoshii OT3] gi|3256586|dbj|BAA29269.1| 190aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 190 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 34/196 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F+GRSNVGKS+LI L +K R PG T+ + + ++ N K ++DM Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKK--VRRGKRPGVTRKI---IEIEWKNHK-------IIDM 51 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERS-TLRCVYLLIDC-----------RHGVKQID 138 PG+G+ PK+ + IV ++ + + + L++D + G ID Sbjct: 52 PGFGFMMGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPID 111 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV----IPTSSV 194 + + FL + + + + K+DK+ QE + +L + E+ IP S+ Sbjct: 112 VEFYQFLRELDIPTIVAVNKLDKIK--NVQEVI---NFLAEKFEVPLSEIDKVFIPISAK 166 Query: 195 KRKGIEVLRKAILETI 210 IE L+ I E I Sbjct: 167 FGDNIERLKNRIFEVI 182 >gi|269468621|gb|EEZ80265.1| GTPase [uncultured SUP05 cluster bacterium] Length = 294 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN L+ +K L+ TS+ P T+H + + +N M VD Sbjct: 8 IAVVGRPNVGKSTLINELIGQK-LSITSHRPQTTRHRIHAI-----DTADNY-QMVFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD--VFSFLDKKA 149 PG KK ++S+ + S++R V +++ K +D V +++ Sbjct: 61 PGIHIGN--KKAINSYMN-----KAASSSIRDVDMILWLVESDKWTKEDSRVLEHIEQVD 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + KIDKL +AQE L + + Y PT E+ P S+ K++ + LR+ IL+ Sbjct: 114 VPVILCINKIDKLR--SAQEVLPFLEKIATKYQPT---ELFPLSAFKKRDTQALRELILK 168 >gi|88703668|ref|ZP_01101384.1| GTP-binding protein engA [Congregibacter litoralis KT71] gi|88702382|gb|EAQ99485.1| GTP-binding protein engA [Congregibacter litoralis KT71] Length = 495 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A +N G T+ + + +++ A ++ Sbjct: 3 PSIALVGRPNVGKSTLFNQLTRSRD-ALVANLSGLTR------DRKYGEGRSDDRAFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G ++ +D+ ++E+S L V LL+D R G+ +D+ + + Sbjct: 56 DTGGVS---GDEEGIDAA-------MAEQSLLAIEEADIVLLLVDARDGLNPVDEQLVQY 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L +++ + +V+ KID P A Sbjct: 106 LRQQSRDFHLVVNKIDGRDPDVA 128 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 9/141 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G +A GR NVGKS+L+N ++ + + + PG T+ + ++ P Sbjct: 197 GGTRVAIVGRPNVGKSTLVNRILGEERVV-VYDQPGTTRDSVY-----IKFVREGRP-YT 249 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G + ++ ++ + I++ LS S V LL+D + G+ D + + Sbjct: 250 LIDTAGVRRRKNVREAIEKFS--IIKTLSAISDANVVVLLVDGQEGLVDQDLHLLGHCLE 307 Query: 148 KAVSYQIVLTKIDKLSPTTAQ 168 + + + K D L P + Sbjct: 308 AGRALVLAVNKWDGLDPDQKE 328 >gi|294055426|ref|YP_003549084.1| ribosome-associated GTPase EngA [Coraliomargarita akajimensis DSM 45221] gi|293614759|gb|ADE54914.1| ribosome-associated GTPase EngA [Coraliomargarita akajimensis DSM 45221] Length = 514 Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 12/161 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAMAL 88 I+ GR NVGKSSL N L+ L S+ PG T+ L+ KD ++K L Sbjct: 183 ISLVGRPNVGKSSLGNALLESTRLI-VSDVPGTTRDSVELDLDYQKDGESIK-----FRL 236 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G R V+ + + ++ ERS + V+L+ID GV + DQ + + Sbjct: 237 ADTAGLRSKRKVGNPVEYFSNVRTQHAIERSDV--VFLVIDAADGVTKQDQALAGDILDA 294 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + +V+ K DKL QE ++ K L +++ T++ E + Sbjct: 295 GKALVVVVNKHDKLKERWDQEPIDGYKNL-KHFLTSYEEAL 334 >gi|307243689|ref|ZP_07525829.1| GTP-binding protein Era [Peptostreptococcus stomatis DSM 17678] gi|306492898|gb|EFM64911.1| GTP-binding protein Era [Peptostreptococcus stomatis DSM 17678] Length = 300 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 22/183 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N +V K +A S+ P T++ V D + + +D Sbjct: 8 VSIVGRPNVGKSTLMNNMVGEK-IAIMSDKPQTTRNTIQAVYTD------DQAQIVFLDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G ++V+ E + C+ ++D + + D + L K V Sbjct: 61 PGI---HKPK---NKLGQMMVKSAEESFKNVDCILFVVDDSDKIGKGDSMIIENLRKAKV 114 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+DK++ +E + LI+ Y E+IP S++K ++ L KAI + Sbjct: 115 PVFLVINKVDKIA--NKEEIFD----LIKMYDQEGLFKEIIPVSALKGSNVDSLIKAIKQ 168 Query: 209 TIN 211 T++ Sbjct: 169 TLD 171 >gi|281358431|ref|ZP_06244912.1| ribosome-associated GTPase EngA [Victivallis vadensis ATCC BAA-548] gi|281315054|gb|EFA99086.1| ribosome-associated GTPase EngA [Victivallis vadensis ATCC BAA-548] Length = 513 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 17/182 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKSSL N +V R+ L+ PG T+ + + L L+ Sbjct: 15 PTVAIVGRPNVGKSSLFNAIVGRR-LSIVHEMPGVTRD------RVVAPLVRGKCRFQLI 67 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI-DCRHGVKQIDQDVFSFLDKK 148 D G G + VD W I + V +L+ + + GV +D++V + L + Sbjct: 68 DTGGLGMLSGETRKVDMWDSRIASQVDIAIGGADVLILVANVQDGVVNLDEEVAARLRES 127 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 K D +PT E++E K R ++ P S + ++G+ L +A ++ Sbjct: 128 GKPVLFAANKCD--NPTLEHESVEFMKLGFR-------KIFPVSCLHKRGVNALVEAAIK 178 Query: 209 TI 210 + Sbjct: 179 LL 180 >gi|187778884|ref|ZP_02995357.1| hypothetical protein CLOSPO_02479 [Clostridium sporogenes ATCC 15579] gi|187772509|gb|EDU36311.1| hypothetical protein CLOSPO_02479 [Clostridium sporogenes ATCC 15579] Length = 439 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 11/114 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L SN PG T+ ++ +V DF L+D Sbjct: 179 IAFVGKPNVGKSSLINKLLGEERLI-VSNIPGTTRDSIDSYVNTDFGEF-------TLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 G K+ ++ + +I Y S C+ L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTYASIERADVCI-LMIDATEGISEQDQKIIGY 282 Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 28/171 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L ++ +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-IAIVQDTPGVTRD-RIYAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G P+ +I+ + ++ + + L+D + G+ D++V Sbjct: 55 MIDTGGI----EPESE-----DIIISQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K +V+ KIDKL E Y N P I +S Sbjct: 106 QMLRKSKKPVVLVVNKIDKLKD-------EDNAYEFYNLGIGDPVTISSSQ 149 >gi|298675494|ref|YP_003727244.1| GTP-binding protein HSR1-like protein [Methanohalobium evestigatum Z-7303] gi|298288482|gb|ADI74448.1| GTP-binding protein HSR1-related protein [Methanohalobium evestigatum Z-7303] Length = 209 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 27/191 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F+GRSNVGKSS I L +K + PG T D M + D Sbjct: 15 EIVFAGRSNVGKSSFIRELTGKK--VKVGKRPGVTLKPYNICYSD----------MLVTD 62 Query: 91 MPGYGYARAPK-KNVDSWGGLIVRYLSERST-LRCVYLLIDC--------RHGVKQ---I 137 MPG+G+ K + D IVRY + ++ L+ID R + I Sbjct: 63 MPGFGFMSGVKDRKKDIVHDKIVRYFENNAKRIKVAVLIIDGPAFIDIADRWNARDEIPI 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVK 195 D ++F FL++ + + + KIDK+ ++ + + P ++I SVK Sbjct: 123 DIEMFEFLNELNIDTIVAVNKIDKIKSKDYEQIMNGIVERLGMSPPWKQWIDIIAPVSVK 182 Query: 196 RKGIEVLRKAI 206 + I+ R+ I Sbjct: 183 KGDIQSARELI 193 >gi|320451137|ref|YP_004203233.1| ribosome-associated GTPase EngA [Thermus scotoductus SA-01] gi|320151306|gb|ADW22684.1| ribosome-associated GTPase EngA [Thermus scotoductus SA-01] Length = 432 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 76/180 (42%), Gaps = 24/180 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N L+ +++ A ++ PG T+ L V +++ LVD Sbjct: 4 VVIVGRPNVGKSSLFNRLLGKRS-AVVADVPGVTRDLKEGV------VESEKGRFLLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G D W I + + V +D R + Q D +V +L KK Sbjct: 57 GGLWSG-------DRWEKKIQEKVDQALEDAEVVLFAVDGRSELTQADYEVAEYLRKKGR 109 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V TK+D P YL Y + IPTSS +G+E L +AI E + Sbjct: 110 PVILVATKVD--DPKHEH-------YLGPLYALGFGDPIPTSSEHARGLEELLEAIWEKL 160 >gi|312877864|ref|ZP_07737811.1| small GTP-binding protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795368|gb|EFR11750.1| small GTP-binding protein [Caldicellulosiruptor lactoaceticus 6A] Length = 609 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 37/180 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G NVGKS + N L R SN PG T +N+ KD+ +VD Sbjct: 21 IALVGNPNVGKSVIFNKLTGRY--VEVSNYPGTTVDVNYGFYKDY----------VIVDT 68 Query: 92 PG-YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG YG + + + + + LS + + V D H +D+D+F L ++ + Sbjct: 69 PGVYGISSFNDEEIVTRDIV----LSTQKIINVV----DSVH----LDRDLF--LTQQLI 114 Query: 151 SYQ----IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 YQ +VL +D++ + +EK K ++ EVI TS+ K GI+ L++AI Sbjct: 115 DYQKEVIVVLNMVDEVEKNNIKIDIEKLKEIL------GVEVIATSASKGLGIDKLKEAI 168 >gi|312793776|ref|YP_004026699.1| small gtp-binding protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180916|gb|ADQ41086.1| small GTP-binding protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 609 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 37/180 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G NVGKS + N L R SN PG T +N+ KD+ +VD Sbjct: 21 IALVGNPNVGKSVIFNKLTGRY--VEVSNYPGTTVDVNYGFYKDY----------VIVDT 68 Query: 92 PG-YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG YG + + + + + LS + + V D H +D+D+F L ++ + Sbjct: 69 PGVYGISSFNDEEIVTRDIV----LSTQKIINVV----DSVH----LDRDLF--LTQQLI 114 Query: 151 SYQ----IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 YQ +VL +D++ + +EK K ++ EVI TS+ K GI+ L++AI Sbjct: 115 DYQKEVIVVLNMVDEVEKNNIKIDIEKLKEIL------GVEVIATSASKGLGIDKLKEAI 168 >gi|218294927|ref|ZP_03495781.1| small GTP-binding protein [Thermus aquaticus Y51MC23] gi|218244835|gb|EED11359.1| small GTP-binding protein [Thermus aquaticus Y51MC23] Length = 432 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 22/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N L+ +++ A ++ PG T+ L V ++ LVD Sbjct: 4 VVIVGRPNVGKSSLFNRLLGKRS-AVVADEPGVTRDLKEGV------VETEQGRFLLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G +K + + R L E V +D R + D +V +L KK Sbjct: 57 GGLWSGDRWEKKIQE---KVDRALEEAE---LVLFAVDGRSDLTPADYEVAEYLRKKGKP 110 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V TK+D SP+ YL Y + IPTSS ++G+E L +AI + + Sbjct: 111 VILVATKVD--SPS-------HEAYLGPLYALGFGDPIPTSSEHKRGLEELLRAIWQRL 160 >gi|312127389|ref|YP_003992263.1| small gtp-binding protein [Caldicellulosiruptor hydrothermalis 108] gi|311777408|gb|ADQ06894.1| small GTP-binding protein [Caldicellulosiruptor hydrothermalis 108] Length = 607 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 37/180 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G NVGKS + N L R SN PG T +N+ KD+ +VD Sbjct: 19 IALVGNPNVGKSVIFNKLTGRY--VEVSNYPGTTVDVNYGFYKDY----------VIVDT 66 Query: 92 PG-YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG YG + + + + + L+ + + V D H +D+D+F L ++ + Sbjct: 67 PGVYGISSFNDEEIVTRDIV----LNTQKIINVV----DSVH----LDRDLF--LTQQLI 112 Query: 151 SYQ----IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 YQ +VL +D++ + +EK K + EVI TS+ K GI+ LR+AI Sbjct: 113 DYQKEVIVVLNMVDEVEKNNIKIDIEKLK------ESLGVEVIATSASKGIGIDKLREAI 166 >gi|225027089|ref|ZP_03716281.1| hypothetical protein EUBHAL_01345 [Eubacterium hallii DSM 3353] gi|224955553|gb|EEG36762.1| hypothetical protein EUBHAL_01345 [Eubacterium hallii DSM 3353] Length = 409 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 26/178 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GR N GKSS++N V + LA S+ G T V K L L + ++D Sbjct: 14 IGFFGRRNAGKSSVVNA-VTGQELAVVSDTKGTTTDP---VSKAMELLP--LGPVMIIDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG+ + G L VR + R+ + L+ID G+KQ ++++ + +K Sbjct: 68 PGF-------DDKGHLGELRVRKTKQILNRTDI--AVLVIDATEGIKQCEEELLAIFKEK 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + Y +V K D LS E+ K L+R + I S++++K I L++ + Sbjct: 119 EIPYLLVYNKEDILS--------EEQKNLLRTEQSEQVNSICVSALEKKHINELKEKL 168 >gi|327399427|ref|YP_004340296.1| GTP-binding protein engA [Hippea maritima DSM 10411] gi|327182056|gb|AEA34237.1| GTP-binding protein engA [Hippea maritima DSM 10411] Length = 434 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 13/177 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA +GRSNVGKSSLIN ++ +N + S+ G T + P + N L+D Sbjct: 169 KIAITGRSNVGKSSLINAILG-ENRSVVSDKIGTTTD-SIDTPFIY-----NSNCYLLID 221 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G KK +D + + +RS + CV+ LID + G+ D+ + + +K Sbjct: 222 TAGIRKKAKTKKAIDKLSSIFSFFAIDRSDI-CVF-LIDAKEGLTSTDKFIIDKIIEKNK 279 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPTSSVKRKGIEVLRKAI 206 I L K D + T E K L + P A E +P S+++ K I L K I Sbjct: 280 GLIIALNKWDLVKNTPFSEY---EKLLKEHLPFAWFAEFMPISAIEVKNIGKLLKKI 333 >gi|121535380|ref|ZP_01667192.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] gi|121306072|gb|EAX47002.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] Length = 408 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 28/188 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR N GKSSLIN L N +N+A S+ PG T + K L + Sbjct: 5 PRGARMHIAIFGRRNAGKSSLINALTN-QNIALVSDVPGTTTDPVY---KAMEILP--IG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + ++D G +D G L + R L + ++ID GV + ++ Sbjct: 59 PVVIIDTAG----------IDDEGELGALRVERTLQVLNKTDQALVVIDQAAGVSEWEER 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L K+ + V+ KID P A ETL+ K L A P ++ S+ R+G+E Sbjct: 109 LVAELKKRQIPVIGVVNKIDTGQPAAA-ETLDWAKRL------AIP-MVAVSAKTRQGVE 160 Query: 201 VLRKAILE 208 L++ +++ Sbjct: 161 ELKRQMIK 168 >gi|257386691|ref|YP_003176464.1| GTP-binding protein [Halomicrobium mukohataei DSM 12286] gi|257168998|gb|ACV46757.1| GTP-binding protein HSR1-related [Halomicrobium mukohataei DSM 12286] Length = 205 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 81/191 (42%), Gaps = 27/191 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI GRSNVGKS+L+ + T PG T+ N F D++ P + D Sbjct: 11 EIVLVGRSNVGKSTLMREITGHS--VDTGQKPGVTRKPNHF---DWAG-----PDFMVTD 60 Query: 91 MPGYGYARAPKKNV-DSWGGLIVRYLSERSTLRCVYLL----------IDCRHGVKQIDQ 139 +PG+G+ ++V + +VRY+ + V +L ID G +I Sbjct: 61 LPGFGFMNGVPEDVREQIKTDVVRYVEANADKILVGILVLDGKAAVDIIDRHSGPDEIPH 120 Query: 140 DV--FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVK 195 DV F FL V + + K+DK+ +E L + YP E I S K Sbjct: 121 DVELFHFLRDVDVEPVVAVNKMDKVD--DEEERLNDICDRLGLYPPWQQWQETIAPISAK 178 Query: 196 RKGIEVLRKAI 206 R ++ L +A+ Sbjct: 179 RGTVDALDEAV 189 >gi|251796247|ref|YP_003010978.1| GTP-binding protein Era [Paenibacillus sp. JDR-2] gi|247543873|gb|ACT00892.1| GTP-binding protein Era [Paenibacillus sp. JDR-2] Length = 299 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 17/171 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A S+ P T++ K + + +D Sbjct: 11 VAIIGRPNVGKSTLMNHLIGQK-IAIMSDKPQTTRN------KIHGVYTTDTSQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P+ + + ++ + V LID G+ D+ + L K Sbjct: 64 PG---IHKPQSKLGDY--MMKTAEGALKEVEAVLFLIDVADGLGGGDRFIIEQLKKVDTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ KIDK+ P T+ + K L YP A E++P S+++ +E L Sbjct: 119 VFLVMNKIDKVQPEQLLSTITQYKDL---YPFA--EIVPISALQGNNVETL 164 >gi|315231766|ref|YP_004072202.1| EngB-like GTP-binding protein [Thermococcus barophilus MP] gi|315184794|gb|ADT84979.1| EngB-like GTP-binding protein [Thermococcus barophilus MP] Length = 190 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 82/190 (43%), Gaps = 28/190 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L +K + PG T+ K + N ++DM Sbjct: 2 IIFVGRSNVGKSTLIYRLTGKK--VKRGKKPGVTR-------KPIEIIWRN---KRVIDM 49 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERS-TLRCVYLLIDC-----------RHGVKQID 138 PG+G+ PK + IVR++ E + + L+ID R G ID Sbjct: 50 PGFGFMSGIPKHVQERIKTDIVRFIEEHAGEIEVAVLVIDGKSALEIIERWERRGEIPID 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLS--PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + F FL + + + + K+DK+ T + +EK L + +P S+ Sbjct: 110 VEFFQFLQELNIPTVVAVNKLDKIKNVSLTINKLIEKFG-LSGTWEDYKELFVPVSAKFG 168 Query: 197 KGIEVLRKAI 206 IE LRK I Sbjct: 169 TNIEELRKVI 178 >gi|309390345|gb|ADO78225.1| tRNA modification GTPase trmE [Halanaerobium praevalens DSM 2228] Length = 464 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 23/175 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N + K A ++ PG T+ V +++ NLK +P + ++D G Sbjct: 233 GKPNVGKSSLLNYFLEEKR-AIVTDIPGTTRD----VIEEYINLK-GIP-LKIIDTAGI- 284 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R K V+ G R L+E++ L V ++D G+ D++++ + K V I+ Sbjct: 285 --RETKDAVEKIGVEKTRKLAEKADL--VLFMLDINQGITAEDREIYQLIKNKPVI--II 338 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + K D A+ T EK K +P P ++ S +K +G+ L+ IL I Sbjct: 339 VNKTD----LEAKITKEKIK---EEFP--EPSLLWISILKEEGLIQLKDNILAEI 384 >gi|148380476|ref|YP_001255017.1| GTP-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153932865|ref|YP_001384700.1| GTP-binding protein EngA [Clostridium botulinum A str. ATCC 19397] gi|153936714|ref|YP_001388221.1| GTP-binding protein EngA [Clostridium botulinum A str. Hall] gi|166224327|sp|A7FW89|DER_CLOB1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224328|sp|A5I4V0|DER_CLOBH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|148289960|emb|CAL84073.1| putative GTP-binding protein EngA [Clostridium botulinum A str. ATCC 3502] gi|152928909|gb|ABS34409.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152932628|gb|ABS38127.1| ribosome-associated GTPase EngA [Clostridium botulinum A str. Hall] Length = 439 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 11/114 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V DF L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLI-VSDIPGTTRDSIDSYVDTDFGEF-------TLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 G K+ ++ + +I Y S C+ L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTYASIERADVCI-LMIDATEGISEQDQKIIGY 282 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 28/169 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ ++ + PG T+ + ++ N K ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGKR-ISIVQDTPGVTRD-RIYAEAEWLNYK-----FTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G PK +IV + ++ + + L+D + G+ D++V Sbjct: 57 DTGGI----EPKSE-----DIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADKEVAQM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K +V+ KIDKL E Y N P I +S Sbjct: 108 LRKSKKPVVLVVNKIDKLKD-------ENNAYEFYNLGIGDPVTISSSQ 149 >gi|213649668|ref|ZP_03379721.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 339 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 41 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 93 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 94 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 150 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 151 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 189 >gi|213028788|ref|ZP_03343235.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 365 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 67 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 119 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 120 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 176 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 177 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 215 >gi|94970562|ref|YP_592610.1| GTP-binding protein Era [Candidatus Koribacter versatilis Ellin345] gi|94552612|gb|ABF42536.1| GTP-binding protein Era [Candidatus Koribacter versatilis Ellin345] Length = 324 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 34/188 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN---FFVPKDFSNLKNNLPAMAL 88 ++ GR N GKS+L+N LV K +A ++ P T++ VPK + L Sbjct: 8 VSIIGRPNAGKSTLLNALVGEK-IAIVTHKPQTTRNRIQGIVTVPKKGQ--------IVL 58 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLI---DCRHGVKQIDQDVFSF 144 VD PG P K ++ R + E L LL+ D H ++ D+ S Sbjct: 59 VDTPG---VHKPDKTLNK------RMMQEVYDALEGCDLLLYIHDVTHKFEKEDEYTLSL 109 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVL 202 + K ++L KID ++ E +I + T H E+IP S+ K G+++L Sbjct: 110 VKKTGQPVMLLLNKIDLIAKPKLLE-------IITQFSTLHDFKEIIPISAAKGSGLDIL 162 Query: 203 RKAILETI 210 RK +L+++ Sbjct: 163 RKKVLQSL 170 >gi|171059545|ref|YP_001791894.1| GTP-binding protein EngA [Leptothrix cholodnii SP-6] gi|238689085|sp|B1XXK9|DER_LEPCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|170776990|gb|ACB35129.1| small GTP-binding protein [Leptothrix cholodnii SP-6] Length = 448 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 17/181 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A +GR NVGKS+LIN + + L + PG T+ VP + + K L A Sbjct: 181 PTRLAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRDA-IHVPFERGDKKYELIDTAG 238 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 + G + K +V V+ L S V LLID GV D + ++ Sbjct: 239 LRRKGKVFESIEKFSV-------VKTLQAISDANVVLLLIDATEGVSDQDAHIAGYVLDA 291 Query: 149 AVSYQIVLTK---IDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K ID T Q ++E+ ++ P V+ S+ KR+G+ L KA Sbjct: 292 GRAVVIAINKWDAIDSYQRETLQRSIEQRLAFLKFAP-----VLMISAKKRQGLGPLWKA 346 Query: 206 I 206 I Sbjct: 347 I 347 >gi|289811789|ref|ZP_06542418.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 377 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 79 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 131 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 132 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 188 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 189 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 227 >gi|90417497|ref|ZP_01225420.1| hypothetical protein GB2207_07462 [marine gamma proteobacterium HTCC2207] gi|90330738|gb|EAS46017.1| hypothetical protein GB2207_07462 [marine gamma proteobacterium HTCC2207] Length = 467 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A +N G T+ + + + + + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVANYSGLTR------DRKYGDGEMHDRRFMVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ +D G+ + L V ++DCR G+ D + L KK Sbjct: 56 DTGGIS---GEEEGIDV--GMAEQSLLAMDEADIVLFIVDCRSGIIAADHMIAETLRKKN 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V KID L P A L Y + PT++ +G+ + + +LE Sbjct: 111 RKVYLVANKIDGLDPAAA---------LADFYQLGFSGMFPTTATHGRGVRSMMEELLE 160 >gi|32455227|gb|AAP83329.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis] Length = 490 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 192 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 245 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 D + F+ S IV+ K D LS QE E+ K Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLS----QEVKEQVK 335 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|213585218|ref|ZP_03367044.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 330 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 32 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 84 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 85 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 141 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 142 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 180 >gi|207857927|ref|YP_002244578.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690463|sp|B5R578|DER_SALEP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|206709730|emb|CAR34082.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 490 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 192 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 245 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|205353618|ref|YP_002227419.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690507|sp|B5RCY8|DER_SALG2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|205273399|emb|CAR38374.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628718|gb|EGE35061.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 490 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 192 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 245 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|289548419|ref|YP_003473407.1| GTP-binding protein Era [Thermocrinis albus DSM 14484] gi|289182036|gb|ADC89280.1| GTP-binding protein Era [Thermocrinis albus DSM 14484] Length = 302 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+L+N L+ K ++ S PG T+ V N+ N + +D Sbjct: 6 VAIVGKPNVGKSTLLNNLIGTK-VSIVSPKPGTTRIRVLGV----KNIPNE-AQIVFLDT 59 Query: 92 PGYGYARAPKKNVDSWG-GLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG R D+ G ++ + + + +ID G +Q D+ VF+ K+ Sbjct: 60 PGIYRPR------DALGEAMVSQAATSLQDADVILFMIDAEDGWRQDDEMVFNTYIKQYA 113 Query: 151 SYQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V+ K+DK+ P E L K + +P EVIP S++K ++ L K I+ Sbjct: 114 KDKPVFLVINKVDKVGPV--DELLPFVKEITDQHPEFR-EVIPISALKGYNLDELLKTIV 170 Query: 208 E 208 + Sbjct: 171 K 171 >gi|16761434|ref|NP_457051.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140869|ref|NP_804211.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213161952|ref|ZP_03347662.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425335|ref|ZP_03358085.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213609480|ref|ZP_03369306.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213861384|ref|ZP_03385854.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825430|ref|ZP_06544667.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|26006725|sp|Q8Z4P6|DER_SALTI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|25328266|pir||AF0821 probable GTP-binding protein STY2764 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503734|emb|CAD02722.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136494|gb|AAO68060.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 490 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 15/158 (9%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 192 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 245 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 D + F+ S IV+ K D LS QE E+ K Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLS----QEVKEQVK 335 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|161612723|ref|YP_001586688.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189037158|sp|A9N205|DER_SALPB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|161362087|gb|ABX65855.1| hypothetical protein SPAB_00422 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 490 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 192 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 245 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|227495128|ref|ZP_03925444.1| GTP-binding protein Era [Actinomyces coleocanis DSM 15436] gi|226831580|gb|EEH63963.1| GTP-binding protein Era [Actinomyces coleocanis DSM 15436] Length = 352 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 81/181 (44%), Gaps = 29/181 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IA GR NVGKS+L N LV K +A TS P T+H + V D L LVD Sbjct: 60 IAIVGRPNVGKSTLTNALVGEK-IAITSMRPETTRHNVRGVVHGDDYQL-------VLVD 111 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQI---DQDVFSFL 145 PGY R L+ R L+E R +L V +++ C ++I D+ + L Sbjct: 112 TPGYHRPRT----------LLGRRLNEMVRESLSEVDVIVFCLPSDQKIGPGDEFIARQL 161 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 V TK DK++P E L L E++P S+ K + I+VL++ Sbjct: 162 RGLRAPIVAVATKTDKVAPPRLMEHLMDIDKL-----GDFKEIVPVSAHKDRQIDVLKEV 216 Query: 206 I 206 + Sbjct: 217 L 217 >gi|16765839|ref|NP_461454.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56412602|ref|YP_149677.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167549461|ref|ZP_02343220.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991827|ref|ZP_02572926.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168261443|ref|ZP_02683416.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466731|ref|ZP_02700585.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194446079|ref|YP_002041777.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197264629|ref|ZP_03164703.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361537|ref|YP_002141173.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|238912639|ref|ZP_04656476.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|17865704|sp|Q9XCI8|DER_SALTY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|81821610|sp|Q5PNI6|DER_SALPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238689919|sp|B5BAY9|DER_SALPK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238693574|sp|B4T0P5|DER_SALNS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|16421063|gb|AAL21413.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56126859|gb|AAV76365.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194404742|gb|ACF64964.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195630729|gb|EDX49321.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093013|emb|CAR58446.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197242884|gb|EDY25504.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205325405|gb|EDZ13244.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329876|gb|EDZ16640.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205349650|gb|EDZ36281.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261247715|emb|CBG25543.1| GTP-binding protein engA [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994635|gb|ACY89520.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159068|emb|CBW18582.1| GTP-binding protein engA [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913506|dbj|BAJ37480.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087014|emb|CBY96783.1| GTP-binding protein engA [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222780|gb|EFX47851.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613736|gb|EFY10675.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619521|gb|EFY16397.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625026|gb|EFY21855.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629531|gb|EFY26307.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634038|gb|EFY30775.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635524|gb|EFY32235.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639800|gb|EFY36479.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644422|gb|EFY40963.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648567|gb|EFY45016.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655213|gb|EFY51522.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658260|gb|EFY54526.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664261|gb|EFY60458.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669428|gb|EFY65577.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673155|gb|EFY69261.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676547|gb|EFY72615.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683297|gb|EFY79311.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685817|gb|EFY81810.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323130847|gb|ADX18277.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194760|gb|EFZ79948.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199552|gb|EFZ84643.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204673|gb|EFZ89671.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208121|gb|EFZ93066.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210155|gb|EFZ95056.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217023|gb|EGA01745.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221821|gb|EGA06225.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225000|gb|EGA09255.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229289|gb|EGA13413.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235396|gb|EGA19480.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237418|gb|EGA21481.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245172|gb|EGA29173.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248875|gb|EGA32801.1| GTP-binding protein Der [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253162|gb|EGA36994.1| GTP-binding protein Der [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255396|gb|EGA39164.1| GTP-binding protein Der [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263529|gb|EGA47056.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266356|gb|EGA49844.1| GTP-binding protein Der [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269813|gb|EGA53263.1| GTP-binding protein Der [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332989446|gb|AEF08429.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 490 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 192 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 245 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|326624338|gb|EGE30683.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 504 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 206 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 258 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 259 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 315 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 316 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 354 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 17 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 59 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 60 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 119 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 120 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 170 Query: 205 AIL 207 +L Sbjct: 171 HVL 173 >gi|62181086|ref|YP_217503.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582944|ref|YP_002636742.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|81309623|sp|Q57LJ0|DER_SALCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783165|sp|C0PYN4|DER_SALPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|62128719|gb|AAX66422.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467471|gb|ACN45301.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322715573|gb|EFZ07144.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 490 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 192 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 245 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|85544494|pdb|2CXX|A Chain A, Crystal Structure Of A Probable Gtp-Binding Protein Engb gi|85544495|pdb|2CXX|B Chain B, Crystal Structure Of A Probable Gtp-Binding Protein Engb gi|85544496|pdb|2CXX|C Chain C, Crystal Structure Of A Probable Gtp-Binding Protein Engb Length = 190 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 34/196 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F+GRSNVGKS+LI L +K R PG T+ + + ++ N K ++D Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKK--VRRGKRPGVTRKI---IEIEWKNHK-------IIDX 51 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERS-TLRCVYLLIDC-----------RHGVKQID 138 PG+G+ PK+ + IV ++ + + + L++D + G ID Sbjct: 52 PGFGFXXGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPID 111 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV----IPTSSV 194 + + FL + + + + K+DK+ QE + +L + E+ IP S+ Sbjct: 112 VEFYQFLRELDIPTIVAVNKLDKIK--NVQEVI---NFLAEKFEVPLSEIDKVFIPISAK 166 Query: 195 KRKGIEVLRKAILETI 210 IE L+ I E I Sbjct: 167 FGDNIERLKNRIFEVI 182 >gi|168182597|ref|ZP_02617261.1| ribosome-associated GTPase EngA [Clostridium botulinum Bf] gi|237795959|ref|YP_002863511.1| GTP-binding protein EngA [Clostridium botulinum Ba4 str. 657] gi|259645868|sp|C3L0M1|DER_CLOB6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|182674194|gb|EDT86155.1| ribosome-associated GTPase EngA [Clostridium botulinum Bf] gi|229263345|gb|ACQ54378.1| ribosome-associated GTPase EngA [Clostridium botulinum Ba4 str. 657] Length = 439 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 11/114 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V DF L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLI-VSDIPGTTRDSIDSYVNTDFGEF-------TLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 G K+ ++ + +I Y S C+ L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTYASIERADVCI-LMIDATEGISEQDQKIIGY 282 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 28/171 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L ++ ++ + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-ISIVQDTPGVTRD-RIYAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G P+ +IV + ++ + + L+D + G+ D++V Sbjct: 55 MIDTGGI----EPESE-----DIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADKEVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K +V+ KIDKL E Y N P I +S Sbjct: 106 QMLRKSKKPVVLVVNKIDKLKD-------ENNAYEFYNLGIGDPVTISSSQ 149 >gi|72392617|ref|XP_847109.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62175623|gb|AAX69756.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70803139|gb|AAZ13043.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|261330300|emb|CBH13284.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 477 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 15/98 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GR++ GKSSL+N +VN +A + G T +NF+ N + LV Sbjct: 247 PEVAFVGRTSSGKSSLVNAIVN-AMVAPYGHLQGTTSSVNFY---------NIADKIVLV 296 Query: 90 DMPGYGY---ARAPKKNVDSWGGLIVRYLSERSTLRCV 124 D PGYGY P + ++ + YL+ S RCV Sbjct: 297 DCPGYGYYNPMETPHLDAENAVASMRAYLT--SCSRCV 332 >gi|67922416|ref|ZP_00515927.1| tRNA modification GTPase TrmE:Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii WH 8501] gi|67855760|gb|EAM51008.1| tRNA modification GTPase TrmE:Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii WH 8501] Length = 460 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 26/181 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 227 KVAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----IESQLVVGGIP-IQVLD 279 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G + R S V L +D D +++ ++ + V Sbjct: 280 TAGI---RQTTDQVEKIG--VERSQLAASQADLVLLTVDATVVWSNQDNEIYQAIEHRPV 334 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID +P AQ +PT E++ TS+ +GIE L AIL+ I Sbjct: 335 I--LVINKIDLATPDLAQ------------FPTQISEIVKTSAANNQGIEALETAILKAI 380 Query: 211 N 211 + Sbjct: 381 H 381 >gi|317055259|ref|YP_004103726.1| small GTP-binding protein [Ruminococcus albus 7] gi|315447528|gb|ADU21092.1| small GTP-binding protein [Ruminococcus albus 7] Length = 396 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 14/142 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GR N GKSS++N N++ LA S+ PG T + K L P M ++D Sbjct: 14 IGFFGRRNAGKSSVVNAFTNQE-LAIVSDTPGTTTDPVY---KAMELLPMG-PVM-IIDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PGY + G L VR SE C L+ DC + + ++ + D + + Sbjct: 68 PGY-------DDEGKLGELRVRKTSEVLGRTDCAVLVTDCTRDLDESEKQLIKLFDSRRI 120 Query: 151 SYQIVLTKIDKLSPTTAQETLE 172 Y I K D L A + E Sbjct: 121 PYVIAKNKSDLLDDIPAADEKE 142 >gi|312140286|ref|YP_004007622.1| gtpase [Rhodococcus equi 103S] gi|325677056|ref|ZP_08156726.1| GTP-binding protein Era [Rhodococcus equi ATCC 33707] gi|311889625|emb|CBH48942.1| putative GTPase [Rhodococcus equi 103S] gi|325552127|gb|EGD21819.1| GTP-binding protein Era [Rhodococcus equi ATCC 33707] Length = 305 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 20/178 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 + F GR N GKS+L N LV K +A TS+ P T+H + V +DF+ L LVD Sbjct: 11 VCFVGRPNTGKSTLTNALVGEK-IAITSSRPQTTRHTIRGIVHRDFAQL-------ILVD 62 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG P+ + +VR + C+ + D + G D+ + + + A Sbjct: 63 TPGL---HRPRTLLGQRLNDLVRDTYSEVDVICLCIPADEKIGPG--DRWILEQVRQMAP 117 Query: 151 SYQIV--LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++V +TKIDK+S L L+ P A EVIP S+V + +E+L K + Sbjct: 118 KTKLVGIVTKIDKVSKDGVAAQLMALSKLL--GPEA--EVIPVSAVSGEQVELLVKVL 171 >gi|145579207|pdb|2DYK|A Chain A, Crystal Structure Of N-Terminal Gtp-Binding Domain Of Enga From Thermus Thermophilus Hb8 gi|145579208|pdb|2DYK|B Chain B, Crystal Structure Of N-Terminal Gtp-Binding Domain Of Enga From Thermus Thermophilus Hb8 Length = 161 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 22/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N L+ +++ A ++ PG T+ L V ++ + LVD Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRS-AVVADVPGVTRDLKEGV------VETDRGRFLLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G +K + + R L + V +D R + Q D +V +L +K Sbjct: 57 GGLWSGDKWEKKIQE---KVDRALEDAE---VVLFAVDGRAELTQADYEVAEYLRRKGKP 110 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V TK+D P + YL Y + IPTSS +G+E L +AI E + Sbjct: 111 VILVATKVD--DP-------KHELYLGPLYGLGFGDPIPTSSEHARGLEELLEAIWERL 160 >gi|150399351|ref|YP_001323118.1| GTP-binding protein [Methanococcus vannielii SB] gi|150012054|gb|ABR54506.1| GTP-binding protein HSR1-related [Methanococcus vannielii SB] Length = 230 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 25/158 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++ GRSNVGKS+ + + R PG T + + ++ LV Sbjct: 37 PKVVVMGRSNVGKSTFVKAVTGEN--VRVGKKPGVTLKITEY----------DMGTYLLV 84 Query: 90 DMPGYGYARA-PKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQ-------- 139 D+PG+GY KK + I++Y+ + +ST+ L++D + ++ ID+ Sbjct: 85 DLPGFGYMEGIEKKAQEKIKDQIIKYVEDNKSTIATSILILDAKALIEIIDRWDQKGEIP 144 Query: 140 ---DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT 174 ++ FL++ +++ V+ K+DK+ + L++ Sbjct: 145 IDLEMADFLEELSLNPIFVINKMDKIKNSEWDAHLDRV 182 >gi|303256256|ref|ZP_07342272.1| GTP-binding protein [Burkholderiales bacterium 1_1_47] gi|331001317|ref|ZP_08324943.1| hydrogenase maturation GTPase HydF [Parasutterella excrementihominis YIT 11859] gi|302860985|gb|EFL84060.1| GTP-binding protein [Burkholderiales bacterium 1_1_47] gi|329569044|gb|EGG50840.1| hydrogenase maturation GTPase HydF [Parasutterella excrementihominis YIT 11859] Length = 404 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 22/191 (11%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E+ PK I GR N GKSS+IN L ++N+A S+ G T F K L Sbjct: 3 EMNQTPKGMRVHIGIFGRRNAGKSSVINAL-TKQNIALVSDVAGTTTDPVF---KAMEIL 58 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV-YLLIDCRHGVKQID 138 L + ++D G ++ G L + E T V ++ID + V + Sbjct: 59 P--LGPVMIIDTAGI-------DDIGDLGKLRIGKTKEVMTKTDVAVIVIDAANDVSDFE 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + S K +Y + KI+ T + E+ +L + + +V+P S++K+KG Sbjct: 110 RSLVSEFKKLGTTYILAANKIE-----TVADPAERIAFLDKAF---GEKVVPISALKKKG 161 Query: 199 IEVLRKAILET 209 I+ LR I++T Sbjct: 162 IDELRSLIVKT 172 >gi|18976486|ref|NP_577843.1| GTP-binding protein [Pyrococcus furiosus DSM 3638] gi|18892029|gb|AAL80238.1| GTP-binding protein [Pyrococcus furiosus DSM 3638] Length = 190 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 30/194 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L +K R PG T+ + + ++ N K ++DM Sbjct: 4 IVFVGRSNVGKSTLIYQLTGKK--VRRGKRPGVTRKI---IEIEWRNHK-------IIDM 51 Query: 92 PGYGY-ARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDC-----------RHGVKQID 138 PG+G+ A PK+ + IV ++ + + L++D + G ID Sbjct: 52 PGFGFMAGLPKEVQERIKDEIVHFIENNAKNIDVAVLVVDGKAAPEIIERWEKRGEIPID 111 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKR 196 + + FL + + + KIDK+ K+ P + E +P S+ Sbjct: 112 VEFYQFLTDLEIPTIVAVNKIDKIKNVQGVIYFLAEKF---GVPFSEIEKVFVPISAKFG 168 Query: 197 KGIEVLRKAILETI 210 IEVL+ I E I Sbjct: 169 TNIEVLKGRINEII 182 >gi|298480725|ref|ZP_06998921.1| GTP-binding protein [Bacteroides sp. D22] gi|298273159|gb|EFI14724.1| GTP-binding protein [Bacteroides sp. D22] Length = 396 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 82/190 (43%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I GR N GKSSLIN L +++A SN PG T L V K ++ P Sbjct: 7 PNANRLHITLFGRRNSGKSSLINALTG-QDIALVSNTPGTTTDL---VSKAM-EIQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I R L LL C +++ Sbjct: 62 CL-FIDTPGF----------DDEGELGELRISRTLKAIEKTDIALLL--CEDTTFFHEKE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L +K + VL KID +E + I HP +I S+ ++ GIE Sbjct: 109 ILALLKEKNIPVIPVLNKID------IRENSDHLATYIEEQCKIHPLLI--SAKEKIGIE 160 Query: 201 VLRKAILETI 210 ++R+AILE + Sbjct: 161 LIRQAILEKL 170 >gi|257052181|ref|YP_003130014.1| GTP-binding protein [Halorhabdus utahensis DSM 12940] gi|256690944|gb|ACV11281.1| small GTP-binding protein [Halorhabdus utahensis DSM 12940] Length = 205 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 27/148 (18%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMAL 88 E+ +GRSNVGKS+L+ L + T PG TQ N + +DF L Sbjct: 11 EVVLAGRSNVGKSTLMRELTG--HTFDTGQRPGVTQEPNHYDWTSEDF----------VL 58 Query: 89 VDMPGYGYARA-PKKNVDSWGGLIVRYLSERSTL----------RCVYLLIDCRHGVKQI 137 D+PG+GY + P + + +VRY+ + + V +ID G +I Sbjct: 59 TDLPGFGYMKGVPDEVREQIKTDVVRYIEANADSILVGVLVVDGKSVIDIIDRHSGPDEI 118 Query: 138 DQDV--FSFLDKKAVSYQIVLTKIDKLS 163 DV F FL + + + K+DK+ Sbjct: 119 PHDVELFHFLRDVGIPPVVAVNKMDKVD 146 >gi|197294660|ref|YP_001799201.1| GTP-binding protein Era [Candidatus Phytoplasma australiense] gi|171853987|emb|CAM11950.1| Glycyl-tRNA synthetase [Candidatus Phytoplasma australiense] Length = 292 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 28/184 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N+L N+K +A TS+ P T+H K + VD Sbjct: 8 IAIVGRPNVGKSTLLNVLTNQK-IAITSDKPQTTRH------KIVGICHESDAQYIFVDT 60 Query: 92 PG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG Y Y K N S+ + S + + + D + + ++++ F+ KK Sbjct: 61 PGINQYKYLLNQKMNQISFRSI--------SDVDVILFVTDSFYHPQ--EKNLLDFIFKK 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 +V+ KID L ++ K +I +Y +P VIP S+V+ K I L+ + Sbjct: 111 KKPLFLVINKIDIL------KSKNKIDAIILSYLNHYPFINVIPLSAVESKNIPKLKSFL 164 Query: 207 LETI 210 + + Sbjct: 165 YQNM 168 >gi|295085093|emb|CBK66616.1| iron-only hydrogenase maturation protein HydF [Bacteroides xylanisolvens XB1A] Length = 396 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 82/190 (43%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I GR N GKSSLIN L +++A SN PG T L V K ++ P Sbjct: 7 PNANRLHITLFGRRNSGKSSLINALTG-QDIALVSNTPGTTTDL---VSKAM-EIQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I R L LL C +++ Sbjct: 62 CL-FIDTPGF----------DDEGELGELRISRTLKAIEKTDIALLL--CEDTTFFHEKE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L +K + VL KID +E + I HP +I S+ ++ GIE Sbjct: 109 ILALLKEKNIPVIPVLNKID------IRENSDHLATYIEEQCKIHPLLI--SAKEKIGIE 160 Query: 201 VLRKAILETI 210 ++R+AILE + Sbjct: 161 LIRQAILEKL 170 >gi|260072547|gb|ACX30447.1| Era/TrmE family GTP-binding protein [uncultured SUP05 cluster bacterium] gi|269468505|gb|EEZ80163.1| GTPase [uncultured SUP05 cluster bacterium] Length = 469 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 21/174 (12%) Query: 23 LLPKAGPPE--------IAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLNFFVP 73 LLP+A E +A GR NVGKS+LIN IL + LA + PG T+ + ++P Sbjct: 164 LLPQATIEEEAEVEGIAVAVLGRPNVGKSTLINRILGEERVLA--IDMPGTTRD-SIYIP 220 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + K L+D G R+ + ++ + I++ + V L++D R G Sbjct: 221 FEREGQK-----YTLIDTAGIRRKRSTHEKIEIFS--IIKAIDALDRSHVVILVLDAREG 273 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK--TKYLIRNYPTAH 185 V + D + + K + IV+ K D L E K K NY + H Sbjct: 274 VTEQDATLLGMIADKGRALLIVINKWDGLDDYQKSEVKRKLDVKLSFVNYASVH 327 >gi|322370029|ref|ZP_08044591.1| GTP-binding protein [Haladaptatus paucihalophilus DX253] gi|320550365|gb|EFW92017.1| GTP-binding protein [Haladaptatus paucihalophilus DX253] Length = 206 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 81/193 (41%), Gaps = 31/193 (16%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMAL 88 E+ F GRSNVGKS+L+ L T PG T+ N F +DF L Sbjct: 11 EVVFVGRSNVGKSTLMRELTGHS--FETGGKPGVTRQPNHFDWASEDF----------ML 58 Query: 89 VDMPGYGYARAPKKN-VDSWGGLIVRYLSERST----------LRCVYLLIDCRHGVKQI 137 D+PG+G+ +++ + IV Y+ E + + V +ID G +I Sbjct: 59 TDLPGFGFMSGVEEDRRERIKTDIVEYIEENAERVLVGVLVVDGKSVIDIIDRHSGEDEI 118 Query: 138 DQDV--FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSS 193 DV F FL + + + + K+DK+ E L + +P + I S Sbjct: 119 PHDVEMFYFLREVGIPVVVAVNKMDKVD--DEDERLNDLCDRLGLHPPWKQWQDTIAPIS 176 Query: 194 VKRKGIEVLRKAI 206 KR I+ L +A+ Sbjct: 177 AKRGNIDALNEAV 189 >gi|206579507|ref|YP_002237139.1| GTP-binding protein EngA [Klebsiella pneumoniae 342] gi|206568565|gb|ACI10341.1| GTP-binding protein EngA [Klebsiella pneumoniae 342] Length = 498 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 9/158 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P Sbjct: 200 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP----- 252 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 253 MQRDEREYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 310 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + F+ S IV+ K D LS ++ E Y Sbjct: 311 LSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDY 348 >gi|312601402|gb|ADQ90657.1| GTPase EngB [Mycoplasma hyopneumoniae 168] Length = 125 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 44/93 (47%) Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 VD+PGYGYA K +I Y + + V+L++D R G +D + ++ + Sbjct: 13 FVDLPGYGYAAVSKTKKHQIDRIIAGYFQKDQPISAVFLILDARVGFTNLDYIMVEYIIQ 72 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + I+ KIDK + +T L + K L N Sbjct: 73 QGFKLHILANKIDKTNQSTRAILLNQCKKLKLN 105 >gi|330508596|ref|YP_004385024.1| GTP-binding protein [Methanosaeta concilii GP-6] gi|328929404|gb|AEB69206.1| GTP-binding protein [Methanosaeta concilii GP-6] Length = 189 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 27/191 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ GRSNVGKS+L L +K PG TQ+ K + + VD Sbjct: 4 EVVLIGRSNVGKSTLFWELTGKK--VPIGKRPGITQY----------PFKTKVGNIFYVD 51 Query: 91 MPGYGYA-RAPKKNVDSWGGLIVRYLSE--RSTLRCV-------YLLIDCR---HGVKQI 137 MPGYG+ R K + + LIV Y E R L V +L I R G + Sbjct: 52 MPGYGFMFRTTKADQEKTKDLIVHYFEEHAREILLAVQVIDAASFLDIADRWEGRGEVPM 111 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVK 195 + +++ FLD + + K+D+++ L+ + P T + + S K Sbjct: 112 EIELWEFLDDLGLDSVLAANKMDRIAKQDRDGALDLICERLGMLPPWTQWQDRVAPISAK 171 Query: 196 RKGIEVLRKAI 206 R IE LR I Sbjct: 172 RGQIEPLRAVI 182 >gi|288934098|ref|YP_003438157.1| ribosome-associated GTPase EngA [Klebsiella variicola At-22] gi|290508296|ref|ZP_06547667.1| ribosome-associated GTPase EngA [Klebsiella sp. 1_1_55] gi|288888827|gb|ADC57145.1| ribosome-associated GTPase EngA [Klebsiella variicola At-22] gi|289777690|gb|EFD85687.1| ribosome-associated GTPase EngA [Klebsiella sp. 1_1_55] Length = 492 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 9/158 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P Sbjct: 194 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP----- 246 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 247 MQRDEREYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 304 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + F+ S IV+ K D LS ++ E Y Sbjct: 305 LSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDY 342 >gi|110669035|ref|YP_658846.1| GTP-binding protein [Haloquadratum walsbyi DSM 16790] gi|119369203|sp|Q18FK7|ENGB_HALWD RecName: Full=Probable GTP-binding protein EngB gi|109626782|emb|CAJ53250.1| probable GTP-binding protein [Haloquadratum walsbyi DSM 16790] Length = 206 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 26/191 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ GRSNVGKS+L+ L T PG T+ N + D+++ + D Sbjct: 10 EVVLLGRSNVGKSTLMRELTGHTGFT-TGRKPGVTRSPNHY---DWAS-----ESFMFTD 60 Query: 91 MPGYGYARAPKKNV-DSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQ--------- 139 +PG+G+ + + + IVRY+ S ++ L++D + V+ ID+ Sbjct: 61 LPGFGFMSGVESSQREQIKTDIVRYIESNAESILAAVLVVDGKSAVEIIDRHSGPDEIPH 120 Query: 140 --DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVK 195 ++FSFL + + + + KIDK+ Q L+ + YP + I S K Sbjct: 121 DIELFSFLWELDLPTVVAVNKIDKVENKDNQ--LDDLCDRLGLYPPWQQWQDTIAPISAK 178 Query: 196 RKGIEVLRKAI 206 R IE L +A+ Sbjct: 179 RGSIEPLEEAL 189 >gi|152971372|ref|YP_001336481.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895966|ref|YP_002920702.1| GTP-binding protein EngA [Klebsiella pneumoniae NTUH-K2044] gi|262040248|ref|ZP_06013499.1| ribosome-associated GTPase EngA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330007822|ref|ZP_08306080.1| ribosome biogenesis GTPase Der [Klebsiella sp. MS 92-3] gi|166198723|sp|A6TCD0|DER_KLEP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|150956221|gb|ABR78251.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548284|dbj|BAH64635.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259042357|gb|EEW43377.1| ribosome-associated GTPase EngA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535310|gb|EGF61796.1| ribosome biogenesis GTPase Der [Klebsiella sp. MS 92-3] Length = 492 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 9/158 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P Sbjct: 194 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP----- 246 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 247 MQRDEREYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 304 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + F+ S IV+ K D LS ++ E Y Sbjct: 305 LSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDY 342 >gi|70941172|ref|XP_740907.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56518944|emb|CAH81409.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 224 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 32/153 (20%) Query: 28 GPPEIAFSGRSNVGKSSLIN------ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G EI GRSNVGKS+ + I VN + S G T+ +N + F N K Sbjct: 57 GVNEICILGRSNVGKSTFLRNFIKYLINVNDNTNIKVSKRSGCTRSINLY---SFENAKK 113 Query: 82 NLPAMALVDMPGYGYARAP--------KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L DMPG GYA KKN+D Y+ R+ + ++LID Sbjct: 114 K-KLFILTDMPGLGYAEGIGEKKMEYLKKNLDD-------YVYLRNQICLFFILIDMSVD 165 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLS 163 + Q + S +D K + +++ TK DK + Sbjct: 166 I----QKIISLVDAIRKTGIPLRVICTKCDKFN 194 >gi|172039509|ref|YP_001806010.1| tRNA modification GTPase TrmE [Cyanothece sp. ATCC 51142] gi|171700963|gb|ACB53944.1| tRNA modification GTPase [Cyanothece sp. ATCC 51142] Length = 460 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 228 VAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLVVGGIP-IQVLDT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G R + ++ L V L ID G D +++ + + + Sbjct: 281 AGI---RQTTDQVEKIGVERSRLAASQADL--VLLTIDATVGWTSQDSEIYQPI--RHLP 333 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID +P +Q +P E++ TS+ +GIE L AIL+ IN Sbjct: 334 VILVINKIDLATPNLSQ------------FPPEITEIVKTSAANHQGIEALEAAILKAIN 381 >gi|332705667|ref|ZP_08425743.1| tRNA modification GTPase trmE [Lyngbya majuscula 3L] gi|332355459|gb|EGJ34923.1| tRNA modification GTPase trmE [Lyngbya majuscula 3L] Length = 459 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 23/176 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N +R + A ++ PG T+ + + + +P L D G Sbjct: 228 GRPNVGKSSLLNAW-SRCDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-DTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R V+ G + R S V L+I+ G DQ+++ + ++ V +V Sbjct: 280 --RETADQVEKIG--VERSRSAAMAADLVLLVIEATTGWSAGDQEIYQQVQERPVI--LV 333 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + K D L+ A+ TL +YP V+ T++ +GI+ L KAIL+ +N Sbjct: 334 INKTD-LASDKAESTL--------SYPNTIERVVKTAAAYNQGIDALEKAILDAVN 380 >gi|118602671|ref|YP_903886.1| small GTP-binding protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567610|gb|ABL02415.1| small GTP-binding protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 465 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 19/173 (10%) Query: 23 LLPKAGPPEI--------AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 LLPK EI A GR NVGKS+LIN ++ ++ + + PG T H + ++P Sbjct: 164 LLPKVTIDEIVEVEGITVAVLGRPNVGKSTLINRILGQERVL-VMDFPG-TTHDSIYIPF 221 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + K +D G R+ + V+ + I++ + V L++D + GV Sbjct: 222 EHEGQK-----YTFIDTAGIRRKRSTHEKVEIFS--IIKAIDALERAHVVILVLDAQVGV 274 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK--TKYLIRNYPTAH 185 + D + + K + IV+ K D L QE K K NY + H Sbjct: 275 IEQDATLLGMIIDKGKALLIVINKWDGLDDYQKQEVKRKLEIKLSFINYASVH 327 >gi|300854433|ref|YP_003779417.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528] gi|300434548|gb|ADK14315.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528] Length = 438 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 13/146 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 ++AF G+ NVGKSSLIN L+ + + S+ PG T+ ++ ++ D+ L L+ Sbjct: 178 KVAFIGKPNVGKSSLINKLLGEERVI-VSDIPGTTRDAVDSYLETDYGKL-------LLI 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + + ER+ + CV L++D H + + D+ + + + + Sbjct: 230 DTAGLRKKSKVKEEIERYSVIRTYTAIERADV-CV-LILDAVHNISEQDEKIIGYAHELS 287 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTK 175 S +++ K D + T +T++K K Sbjct: 288 KSIMVIINKWDLIDKDT--KTVDKYK 311 >gi|78357435|ref|YP_388884.1| tRNA modification GTPase TrmE [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552067|sp|Q30YQ7|MNME_DESDG RecName: Full=tRNA modification GTPase mnmE gi|78219840|gb|ABB39189.1| tRNA modification GTPase trmE [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 468 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 27/182 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA--L 88 ++ +G+ N GKSSL+N L+ RK A ++ PG T +DF L +A L Sbjct: 228 QVVLAGQVNAGKSSLLNALLGRKR-AIVTDVPGTT--------RDFLEESITLDGLAVRL 278 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G R V+ G + R L+ ++ L V L++D R G +Q++ + + + Sbjct: 279 VDTAGL---RETGDIVEQEGVRMSRDLAAQADL--VLLVVDSRLGTGPHEQELMAAM--E 331 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 A S +VL K D + ++ L++ + P + S+ + KG++ L A+ E Sbjct: 332 AGSVLVVLNKTDAAT----EDELDRCVRSLAGRPH-----VAVSAREGKGMDSLAAAVRE 382 Query: 209 TI 210 + Sbjct: 383 MV 384 >gi|254514003|ref|ZP_05126064.1| GTP-binding protein EngA [gamma proteobacterium NOR5-3] gi|219676246|gb|EED32611.1| GTP-binding protein EngA [gamma proteobacterium NOR5-3] Length = 474 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A +N G T+ + + ++ A ++ Sbjct: 3 PSIALVGRPNVGKSTLFNQLTRSRD-ALVANLSGLTRD------RKYGEGRSEDRAFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G ++ +D+ ++E+S L V LL+D + G+ +D + + Sbjct: 56 DTGGVS---GDEEGIDAA-------MAEQSLLAIDEADVVLLLVDAKDGLNPVDVQLVQY 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L +K+ + +V+ KID P A Sbjct: 106 LRQKSRDFHLVVNKIDGRDPDVA 128 Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 13/141 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G +A GR NVGKS+L+N ++ + + PG T+ + N Sbjct: 174 EQGGTRVAVVGRPNVGKSTLVNRILGEDRVV-VYDQPGTTRDSVYI------NFSREGRP 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ V+ + I++ LS S V LL+D + G+ +DQD+ Sbjct: 227 YTLIDTAGVRRRKNVREAVEKFS--IIKTLSAISDANVVVLLVDGQEGL--VDQDLHLLG 282 Query: 146 DKKAVSYQIVLT--KIDKLSP 164 + +VL K D L P Sbjct: 283 NCLEAGRALVLAVNKWDGLDP 303 >gi|13124242|sp|Q9V288|ENGB_PYRAB RecName: Full=Probable GTP-binding protein EngB Length = 211 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 34/196 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L ++ R PG T+ + + ++ N K ++DM Sbjct: 25 IVFVGRSNVGKSTLIYRLTGKR--VRRGKRPGVTRKI---IEIEWKNHK-------IIDM 72 Query: 92 PGYGY-ARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDC-----------RHGVKQID 138 PG+G+ A PK+ + IV ++ + S + L++D + G ID Sbjct: 73 PGFGFMAGLPKEVQERIKDEIVHFIEDNASKIDVAVLVVDGKAAPEIIERWEKRGEIPID 132 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV----IPTSSV 194 + + FL + + + + K+DK+ Q + +L + E+ IP S+ Sbjct: 133 VEFYQFLRELNIPTVVAVNKLDKIK--NVQRVVH---FLAEKFEVPWDEIDKTFIPISAK 187 Query: 195 KRKGIEVLRKAILETI 210 +E L+ I E I Sbjct: 188 FGDNVEKLKNRIYEII 203 >gi|285019300|ref|YP_003377011.1| GTP-binding protein era [Xanthomonas albilineans GPE PC73] gi|283474518|emb|CBA17019.1| probable gtp-binding protein era [Xanthomonas albilineans] Length = 299 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 26/184 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 +A GR NVGKS+L N LV K ++ SN P T+H + + PA + LV Sbjct: 13 VAVIGRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIA--------SFPAGQLLLV 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV---YLLIDCRHGVKQIDQDVFSFLD 146 D PG R K+ ++ V + R L V L+I+ ++ D F+ L Sbjct: 64 DTPGL--HREHKRAMNR-----VMNRAARGALEGVDAGLLVIEAGRWDEE-DTLAFNVLG 115 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V+ K+D+L TA + R++ HP S++KRKG+E L + + Sbjct: 116 DAGIPVVLVVNKVDRLKDKTALLPFLQQVSDGRSFAAVHP----VSALKRKGMEALVRDL 171 Query: 207 LETI 210 L + Sbjct: 172 LALV 175 >gi|222529552|ref|YP_002573434.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725] gi|222456399|gb|ACM60661.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725] Length = 607 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 37/180 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G NVGKS + N L R SN PG T +N+ KD+ +VD Sbjct: 19 IALVGNPNVGKSVIFNKLTGRY--VEVSNYPGTTVDVNYGFYKDY----------VIVDT 66 Query: 92 PG-YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG YG + + + + + L+ + + V D H +D+D+F L ++ + Sbjct: 67 PGVYGISSFNDEEIVTRDIV----LNTQKIINVV----DSVH----LDRDLF--LTQQLI 112 Query: 151 SYQ----IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 YQ +VL +D++ ++K K + EVI TS+ K GI+ LR+AI Sbjct: 113 DYQKEVIVVLNMVDEVEKNNITIAIDKLK------ESLGVEVIVTSASKGIGIDKLREAI 166 >gi|28210831|ref|NP_781775.1| GTP-binding protein EngA [Clostridium tetani E88] gi|37999662|sp|Q895X8|DER_CLOTE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|28203269|gb|AAO35712.1| GTP-binding protein [Clostridium tetani E88] Length = 438 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%) Query: 32 IAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 IAF G+ NVGKSSLIN IL +N+ SN PG T+ ++ F+ +D L+ Sbjct: 179 IAFVGKPNVGKSSLINKILGEERNI--VSNIPGTTRDAIDSFLERDEDKF-------ILI 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K ++ + + +R+ + C+ LLID G+ + D+ + + + Sbjct: 230 DTAGLRRRSKVKDQIERYSTVRTYAAIDRADV-CI-LLIDAEEGISEQDKKIIGYAHELN 287 Query: 150 VSYQIVLTKIDKLSPTT 166 + +V+ K D + T Sbjct: 288 KALMVVVNKWDLIEKET 304 >gi|326793316|ref|YP_004311137.1| tRNA modification GTPase mnmE [Clostridium lentocellum DSM 5427] gi|326544080|gb|ADZ85939.1| tRNA modification GTPase mnmE [Clostridium lentocellum DSM 5427] Length = 460 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ +N A ++ PG T+ V + + N+ + +P L+D Sbjct: 226 AIVGRPNVGKSSLLNALL-EENKAIVTDIPGTTRD----VVEAYLNI-DGIP-FQLLDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V +L+D G+ DQ++ + K V Y Sbjct: 279 GI---RETEDIVEKIG--VERSKSSIEEADLVLMLVDSHVGLLDKDQEILEQVKNKHVIY 333 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D L QE LE T + ++ EVI S+ ++ G+ LR+A+ Sbjct: 334 --IFNKTD-LENNITQEMLE-THF-------SNGEVIKVSAKEQSGLNELRQAM 376 >gi|161502327|ref|YP_001569439.1| GTP-binding protein EngA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863674|gb|ABX20297.1| hypothetical protein SARI_00360 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 504 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 206 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 258 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 259 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 315 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 316 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 354 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 17 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 59 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 60 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 119 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + +V K D L P A Sbjct: 120 LRSREKPTFLVANKTDGLDPDQA 142 >gi|163784433|ref|ZP_02179314.1| GTP-binding protein [Hydrogenivirga sp. 128-5-R1-1] gi|159880300|gb|EDP73923.1| GTP-binding protein [Hydrogenivirga sp. 128-5-R1-1] Length = 451 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N ++ +K A + PG T+ ++ N+ LVD Sbjct: 4 VAIVGRPNVGKSSLFNRIIGQKK-AIVEDIPGITRD-RLIQTTEWRNI-----PFELVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 GY + + D + I + + E L++D + G+ + D+D+ L K Sbjct: 57 GGY-----IETDDDKFAPFIRKQIEKEMEDADAFILVVDSKTGLTEADKDIARILHKTEK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I + K+D S E T Y Y +V P S++++ G+ L ++E I Sbjct: 112 PVYIAVNKVDNPSQ-------EDTIYEF--YELGFDKVFPVSTIQKYGVADLLDEVIENI 162 >gi|222479800|ref|YP_002566037.1| small GTP-binding protein [Halorubrum lacusprofundi ATCC 49239] gi|254783199|sp|B9LNM9|ENGB_HALLT RecName: Full=Probable GTP-binding protein EngB gi|222452702|gb|ACM56967.1| small GTP-binding protein [Halorubrum lacusprofundi ATCC 49239] Length = 206 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 27/191 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ GRSNVGKS+L+ L T PG T+ N F D+++ + D Sbjct: 11 EVVLVGRSNVGKSTLMRELTGHD--FSTGGKPGVTRQPNHF---DWAS-----ESFMFTD 60 Query: 91 MPGYGY-ARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQ--------- 139 +PG+G+ + +++ ++ IVRYL E + ++ +++D + V ID+ Sbjct: 61 LPGFGFMSGVEEEHREAIKTNIVRYLEENADSILAGVVVMDGKAAVDIIDRHAERGNIPH 120 Query: 140 --DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVK 195 ++F FL+ V + + K DK+ E L++ + YP + I K Sbjct: 121 DVEMFGFLEDVGVEPIVAVNKTDKID--DLDERLDEICDRLGLYPPWQQWSDQIAPICAK 178 Query: 196 RKGIEVLRKAI 206 R IE L + + Sbjct: 179 RGDIEALEECL 189 >gi|56750048|ref|YP_170749.1| tRNA modification GTPase TrmE [Synechococcus elongatus PCC 6301] gi|56685007|dbj|BAD78229.1| thiophen and furan oxidation protein [Synechococcus elongatus PCC 6301] Length = 482 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 22/181 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKSSL+N +R + A ++ PGRT+ L + + +P L D Sbjct: 245 KIAIVGRPNVGKSSLLNAW-SRCDRAIVTDLPGRTRDL-----VESQLIVGGIPVQVL-D 297 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G R ++ + L V L ID G DQ ++ + + + Sbjct: 298 TAGI---RETSDQVEQIGVERSRRAAQSADL--VLLTIDASAGWSAEDQTIWEAVSDRPI 352 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D+LS E ++ I ++ T++ ++KGIE L AIL + Sbjct: 353 L--LVINKRDRLS--------EAERHAIALPQQEFKAIVWTAAAQQKGIEDLEAAILAAV 402 Query: 211 N 211 Sbjct: 403 G 403 >gi|312622218|ref|YP_004023831.1| small GTP-binding protein [Caldicellulosiruptor kronotskyensis 2002] gi|312202685|gb|ADQ46012.1| small GTP-binding protein [Caldicellulosiruptor kronotskyensis 2002] Length = 607 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 37/180 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G NVGKS + N L R SN PG T +N+ KD+ +VD Sbjct: 19 IALVGNPNVGKSVIFNRLTGRY--VEVSNYPGTTVDVNYGFYKDY----------VIVDT 66 Query: 92 PG-YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG YG + + + + + L+ + + V D H +D+D+F L ++ + Sbjct: 67 PGVYGISSFNDEEIVTRDIV----LNTQKVINVV----DSVH----LDRDLF--LTQQLI 112 Query: 151 SYQ----IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 YQ +VL +D++ ++K K + EVI TS+ K GI+ LR+AI Sbjct: 113 DYQKEVIVVLNMVDEVEKNNITIDIDKLK------ESLGVEVIVTSASKGIGIDKLREAI 166 >gi|205829221|sp|Q5N638|MNME_SYNP6 RecName: Full=tRNA modification GTPase mnmE Length = 462 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N +R + A ++ PGRT+ L + + +P L D Sbjct: 226 IAIVGRPNVGKSSLLNAW-SRCDRAIVTDLPGRTRDL-----VESQLIVGGIPVQVL-DT 278 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G R ++ + L V L ID G DQ ++ + + + Sbjct: 279 AGI---RETSDQVEQIGVERSRRAAQSADL--VLLTIDASAGWSAEDQTIWEAVSDRPIL 333 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K D+LS E ++ I ++ T++ ++KGIE L AIL + Sbjct: 334 --LVINKRDRLS--------EAERHAIALPQQEFKAIVWTAAAQQKGIEDLEAAILAAVG 383 >gi|187734830|ref|YP_001876942.1| small GTP-binding protein [Akkermansia muciniphila ATCC BAA-835] gi|238691864|sp|B2UMV5|DER_AKKM8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|187424882|gb|ACD04161.1| small GTP-binding protein [Akkermansia muciniphila ATCC BAA-835] Length = 464 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 18/186 (9%) Query: 27 AGPPEIAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 A P ++A GR N GKSSL+N IL +R+ + SN G T+ D L + P Sbjct: 187 ALPIKVAVVGRPNAGKSSLVNAILRDRRTI--VSNVAGTTRD-----AIDVPYLHDGQPY 239 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFS 143 + L+D G P+ D+ + SE++ R L+ID G+ Q D+ + Sbjct: 240 V-LIDTAGM----RPRSRRDTSVEVFSAMRSEKAIRRADICLLVIDIAAGITQQDRRIAG 294 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTA-QETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIE 200 + ++ I++ K D P + ++ + + + +R + ++ I TS+ K +G+E Sbjct: 295 IIAEEGKPCIIIVNKFDLFHPNASRKDRMAEVEEQVRRELFFISYAPFIATSAKKAEGVE 354 Query: 201 VLRKAI 206 ++ K I Sbjct: 355 IIFKVI 360 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 15/133 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N + R+ +A + PG T+ P ++ A ++ Sbjct: 5 PTIAIVGRPNVGKSAIFNRMAGRR-IAIVHDEPGVTRD-RLSAPCKITDR-----ACKIM 57 Query: 90 DMPGYG--YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D G G + + V++ + ++ T + ++DCR + IDQ + L K Sbjct: 58 DTGGIGARLSDGFAEQVEAEADIAIK------TADLILFVLDCRDHLTPIDQSIADHLRK 111 Query: 148 KAVSYQIVLTKID 160 + ++L K D Sbjct: 112 SDIPVILLLNKAD 124 >gi|319789668|ref|YP_004151301.1| ribosome-associated GTPase EngA [Thermovibrio ammonificans HB-1] gi|317114170|gb|ADU96660.1| ribosome-associated GTPase EngA [Thermovibrio ammonificans HB-1] Length = 479 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 22/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL-PAMAL 88 P +A GR NVGKSSL N L+ RK +A N PG T+ D K L + Sbjct: 5 PVVAIVGRPNVGKSSLFNRLLGRK-VAIIDNTPGVTRD-RVVQEADIDEHKVVLVDTGGV 62 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 V+ + +A+ + R + E + ++D + G+ +D++V L + Sbjct: 63 VEKDAHEFAKETTEQAK-------RAMEEAD---VIVFVVDGQEGINPLDEEVAKLLRRW 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + KID + +E Y Y EVIP S++ + GI L++ ILE Sbjct: 113 KKPVIVAVNKID-------EPFMEDLVYDF--YRLGFDEVIPISTIHKIGIPTLKEKILE 163 Query: 209 TI 210 + Sbjct: 164 KL 165 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 13/179 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMA 87 P ++A GR N+GKS+L+N LV + A S+ PG T+ ++ +V + Sbjct: 221 PIKVAIVGRPNMGKSTLLNALVGEER-AIVSDIPGTTRDAIDTYV-------RVGDDEFI 272 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G R K+++ + L R L V L++D + G + D + + Sbjct: 273 FIDTAGI-RRRGKIKDIEYYSYL--RSLDAIDRADVVVLMVDAQEGPTERDAKIAGMALE 329 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K I + KID L E L++ L+ ++ P V S+ +RKG++ L K I Sbjct: 330 KFKPIVIAVNKIDTLKDQKEWERLQRELDLVFDFIPFAPRVF-ISAKERKGLKELLKQI 387 >gi|170757031|ref|YP_001782064.1| GTP-binding protein EngA [Clostridium botulinum B1 str. Okra] gi|229710728|sp|B1IIN2|DER_CLOBK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169122243|gb|ACA46079.1| ribosome-associated GTPase EngA [Clostridium botulinum B1 str. Okra] Length = 439 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V +F L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLI-VSDIPGTTRDSIDSYVDTEFGEF-------TLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 G K+ ++ + +I Y S C+ L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTYASIERADVCI-LMIDATEGISEQDQKIIGY 282 Score = 42.7 bits (99), Expect = 0.034, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 28/171 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L ++ +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-IAIVQDTPGVTRD-RIYAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G P+ +IV + ++ + + L+D + G+ D++V Sbjct: 55 MIDTGGI----EPESE-----DIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K +V+ KIDKL E Y N P I +S Sbjct: 106 QMLRKSKKPVVLVVNKIDKLKD-------ENNAYEFYNLGIGDPVTISSSQ 149 >gi|14520404|ref|NP_125879.1| GTP-binding protein [Pyrococcus abyssi GE5] gi|5457619|emb|CAB49110.1| GTP-binding protein [Pyrococcus abyssi GE5] Length = 190 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 34/196 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L ++ R PG T+ + + ++ N K ++DM Sbjct: 4 IVFVGRSNVGKSTLIYRLTGKR--VRRGKRPGVTRKI---IEIEWKNHK-------IIDM 51 Query: 92 PGYGY-ARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDC-----------RHGVKQID 138 PG+G+ A PK+ + IV ++ + S + L++D + G ID Sbjct: 52 PGFGFMAGLPKEVQERIKDEIVHFIEDNASKIDVAVLVVDGKAAPEIIERWEKRGEIPID 111 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV----IPTSSV 194 + + FL + + + + K+DK+ Q + +L + E+ IP S+ Sbjct: 112 VEFYQFLRELNIPTVVAVNKLDKIK--NVQRVVH---FLAEKFEVPWDEIDKTFIPISAK 166 Query: 195 KRKGIEVLRKAILETI 210 +E L+ I E I Sbjct: 167 FGDNVEKLKNRIYEII 182 >gi|168180594|ref|ZP_02615258.1| GTP-binding protein [Clostridium botulinum NCTC 2916] gi|226949875|ref|YP_002804966.1| GTP-binding protein EngA [Clostridium botulinum A2 str. Kyoto] gi|254783146|sp|C1FSU2|DER_CLOBJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|182668460|gb|EDT80439.1| GTP-binding protein [Clostridium botulinum NCTC 2916] gi|226841615|gb|ACO84281.1| ribosome-associated GTPase EngA [Clostridium botulinum A2 str. Kyoto] gi|322806789|emb|CBZ04358.1| GTP-binding protein EngA [Clostridium botulinum H04402 065] Length = 439 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V +F L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLI-VSDIPGTTRDSIDSYVDTEFGEF-------TLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 G K+ ++ + +I Y S C+ L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTYASIERADVCI-LMIDATEGISEQDQKIIGY 282 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 28/171 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVQDTPGVTRD-RIYAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G PK +IV + ++ + + L+D + G+ D++V Sbjct: 55 MIDTGGI----EPKSE-----DIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K +V+ KIDKL E Y N P I +S Sbjct: 106 QMLRKSKKPVVLVVNKIDKLKD-------ENNAYEFYNLGIGDPVTISSSQ 149 >gi|82539401|ref|XP_724091.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23478619|gb|EAA15656.1| probable GTP-binding protein engb-related [Plasmodium yoelii yoelii] Length = 238 Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 25/129 (19%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLIN------ILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + G EI GRSNVGKS+ + I VN + S G T+ +N + F Sbjct: 110 IDNYGVNEICILGRSNVGKSTFLRNFIKYLINVNDNTNIKVSKRSGCTRSINLY---SFE 166 Query: 78 NLKNNLPAMALVDMPGYGYARAP--------KKNVDSWGGLIVRYLSERSTLRCVYLLID 129 N K L DMPG GYA KKN+D + L R+ + ++LID Sbjct: 167 NAKKK-KLFILTDMPGLGYAEGIGEKKMEYLKKNLDDYVYL-------RNQICLFFILID 218 Query: 130 CRHGVKQID 138 +++ID Sbjct: 219 MSVDIQKID 227 >gi|306821539|ref|ZP_07455139.1| GTP-binding protein Era [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550433|gb|EFM38424.1| GTP-binding protein Era [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 316 Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 21/183 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GRSNVGKS+L+N ++ K +A TS+ P T+ + D + + +D Sbjct: 26 VSIVGRSNVGKSTLLNAIIGEK-IAITSDKPQTTRSRIKGIYNDEES------QIIFLDT 78 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + PK + S+ V S ST + ++D + ++D ++ L K Sbjct: 79 PG---VQKPKNKLGSYMAKEVSLSS--STADVIVYVVDESEKIGRLDHNIIENLKKTKQP 133 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAILET 209 +VL KIDKLS +K +I+ Y +++P ++K++ + L K I + Sbjct: 134 KILVLNKIDKLSE-------DKIFDIIKMYDEIGIFDDIVPICAIKKRNVVELIKTIKKY 186 Query: 210 INY 212 + Y Sbjct: 187 LVY 189 >gi|153939462|ref|YP_001391817.1| GTP-binding protein EngA [Clostridium botulinum F str. Langeland] gi|166224329|sp|A7GGA7|DER_CLOBL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|152935358|gb|ABS40856.1| ribosome-associated GTPase EngA [Clostridium botulinum F str. Langeland] gi|295319842|gb|ADG00220.1| ribosome-associated GTPase EngA [Clostridium botulinum F str. 230613] Length = 439 Score = 48.1 bits (113), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V +F L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLI-VSDIPGTTRDSIDSYVDTEFGEF-------TLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 G K+ ++ + +I Y S C+ L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTYASIERADVCI-LMIDATEGISEQDQKIIGY 282 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 28/171 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVQDTPGVTRD-RIYAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G PK +IV + ++ + + L+D + G+ D++V Sbjct: 55 MIDTGGI----EPKSE-----DIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K +V+ KIDKL E Y N P I +S Sbjct: 106 QMLRKSKKPVVLVVNKIDKLKD-------ENNAYEFYNLGIGDPVTISSSQ 149 >gi|256425494|ref|YP_003126147.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588] gi|256040402|gb|ACU63946.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588] Length = 441 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 25/188 (13%) Query: 30 PEIAFSGRSNVGKSSLINILV-NRKNLARTSNAPGRTQ-----HLNFFVPKDFSNLKNNL 83 P+IA G+ NVGKSSL+N L+ +N+ S+ PG T+ H F KDF Sbjct: 181 PKIAIIGQPNVGKSSLLNALIGEERNI--VSDIPGTTRDTIHTHYKMF-QKDF------- 230 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G +++++ + ++R + LL+D GV D +FS Sbjct: 231 ---VLIDTAGLRRKNKVQEDLEFYS--VIRAIKAMDEADVCLLLLDATKGVTAQDLSIFS 285 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAHPEVIPTSSVKRKGIEVL 202 +K +++ K D + + + K L R P + VI TS V+++ I Sbjct: 286 LAGRKGKGLVVLVNKWDLIEDKSTNSARDYEKDLKGRLAPFSDVPVIFTSVVEKQRI--- 342 Query: 203 RKAILETI 210 KAI E + Sbjct: 343 FKAIEEAL 350 >gi|323305433|gb|EGA59177.1| YDR336W-like protein [Saccharomyces cerevisiae FostersB] gi|323309656|gb|EGA62864.1| YDR336W-like protein [Saccharomyces cerevisiae FostersO] gi|323338245|gb|EGA79478.1| YDR336W-like protein [Saccharomyces cerevisiae Vin13] gi|323355642|gb|EGA87462.1| YDR336W-like protein [Saccharomyces cerevisiae VL3] Length = 126 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 13/128 (10%) Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D PGYG+ + ++ G + ++YL ER L +LL+ + D + ++ + Sbjct: 1 MIDSPGYGFNSSKEQ-----GKVTLQYLLERKQLVRCFLLLAGDKEINNTDNMIIQYIHE 55 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------KRKGIEV 201 V +++V TK+DK+ + + L+ + PT P ++ T+S+ KR GI++ Sbjct: 56 HGVPFEVVFTKMDKVKDLNKFKKKVMSSGLM-DLPTL-PRLVLTNSLTSSTSPKRFGIDL 113 Query: 202 LRKAILET 209 LR I ++ Sbjct: 114 LRYVIFQS 121 >gi|310659884|ref|YP_003937605.1| GTPase [Clostridium sticklandii DSM 519] gi|308826662|emb|CBH22700.1| GTPase [Clostridium sticklandii] Length = 459 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 25/172 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N ++ +++ A + G T+ + +++ N+ +P + +VD G Sbjct: 228 GKPNVGKSSLLNAIL-KESRAIVTEIEGTTRD----IIEEYVNI-GGIP-LKIVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R V+ G + E + L V +++D + DQD+ S L DKKA+ I Sbjct: 280 --RETDDLVEKIGVQKSKESFESADL--VIMMLDSSRHLSNQDQDILSLLGDKKAI---I 332 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ K D S T E I NY P +I S++++KGI++L K I Sbjct: 333 LVNKTDLPSMVTDDE--------IHNYAKGKP-IIRISALEKKGIDLLEKEI 375 >gi|51892817|ref|YP_075508.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] gi|81826113|sp|Q67NS9|DER_SYMTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|51856506|dbj|BAD40664.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 471 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 15/165 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLP 84 + GP +A GR NVGKSSL+N ++ + + S+ PG T+ ++ V + Sbjct: 174 EGGPVRVAVIGRPNVGKSSLVNAILGEERVI-VSDVPGTTRDAIDVLVERGEDKF----- 227 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G ++ V+ + ++R L + V ++ID + GV + DQ + + Sbjct: 228 --LLIDTAGMRRKARVEEAVERYS--VMRALRAVERAQVVLIVIDAQDGVTEQDQRIAGY 283 Query: 145 LDKKAVSYQIVLTK---IDKLSPTTAQETLE-KTKYLIRNYPTAH 185 + + +V+ K I+K T A+ T E + + +Y H Sbjct: 284 AHENGKACIVVVNKWDLIEKDDRTMAKMTEEVRMRLAFMDYAMIH 328 >gi|309388705|gb|ADO76585.1| iron-only hydrogenase maturation protein HydF [Halanaerobium praevalens DSM 2228] Length = 415 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 27/192 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K P IA GR NVGKSSLIN L N+ +LA S+ PG T V K L P Sbjct: 6 KGDRPHIAVFGRRNVGKSSLINRLTNQ-DLALVSSQPGTTTDP---VYKAMELLPIG-PV 60 Query: 86 MALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLR---CVYLLIDCRHGVKQIDQDV 141 M ++D G +D G L +R + +R L+I G ++ + Sbjct: 61 M-IIDTAG----------IDDQGELGAMRIKKTKEIMRKTDLALLVISAAQGAGDFERKL 109 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK---YLIRNYPTAHPEVIPTSSVKRKG 198 +K + + +L KID L +++ K++ + ++N + EVI SS K Sbjct: 110 IKDFKEKNIPFLTILNKIDILKDLNSEQVELKSELKDFFLKN----NLEVIKVSSKKEIN 165 Query: 199 IEVLRKAILETI 210 I+++R+ I + + Sbjct: 166 IDLIREKIAQKM 177 >gi|55981360|ref|YP_144657.1| GTP-binding protein EngA [Thermus thermophilus HB8] gi|55772773|dbj|BAD71214.1| GTP-binding protein [Thermus thermophilus HB8] Length = 431 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 22/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N L+ +++ A ++ PG T+ L V ++ + LVD Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRS-AVVADVPGVTRDLKEGV------VETDRGRFLLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G +K + + R L + V +D R + Q D +V +L +K Sbjct: 57 GGLWSGDKWEKKIQE---KVDRALEDAE---VVLFAVDGRAELTQADYEVAEYLRRKGKP 110 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V TK+D P + YL Y + IPTSS +G+E L +AI E + Sbjct: 111 VILVATKVD--DP-------KHELYLGPLYGLGFGDPIPTSSEHARGLEELLEAIWERL 160 >gi|46199327|ref|YP_004994.1| GTP-binding protein EngA [Thermus thermophilus HB27] gi|46196952|gb|AAS81367.1| GTP-binding protein [Thermus thermophilus HB27] Length = 431 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 22/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N L+ +++ A ++ PG T+ L V ++ + LVD Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRS-AVVADVPGVTRDLKEGV------VETDRGRFLLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G +K + + R L + V +D R + Q D +V +L +K Sbjct: 57 GGLWSGDKWEKKIQE---KVDRALEDAE---VVLFAVDGRAELTQADYEVAEYLRRKGKP 110 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V TK+D P + YL Y + IPTSS +G+E L +AI E + Sbjct: 111 VILVATKVD--DP-------KHELYLGPLYGLGFGDPIPTSSEHARGLEELLEAIWERL 160 >gi|313125304|ref|YP_004035568.1| small GTP-binding protein domain [Halogeometricum borinquense DSM 11551] gi|312291669|gb|ADQ66129.1| small GTP-binding protein domain [Halogeometricum borinquense DSM 11551] Length = 206 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 22/146 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ GRSNVGKS+L+ L T PG T+ N F D+S K D Sbjct: 10 EVVLVGRSNVGKSTLMRELTGHSKFT-TGKKPGVTRQPNHF---DWSGEK-----FMFTD 60 Query: 91 MPGYGYARAPKKN-VDSWGGLIVRYLSERSTL----------RCVYLLIDCRHGVKQIDQ 139 +PG+G+ +++ + IVRYL + + V +ID G +I Sbjct: 61 LPGFGFMSGVEEHRREEIKTDIVRYLESNADDILAGVLVVDGKSVVDIIDRHSGPDEIPH 120 Query: 140 DV--FSFLDKKAVSYQIVLTKIDKLS 163 DV F FL + V + + K+DK+ Sbjct: 121 DVEMFHFLRELGVPVVVAVNKMDKVD 146 >gi|283786127|ref|YP_003365992.1| GTP-binding protein [Citrobacter rodentium ICC168] gi|282949581|emb|CBG89199.1| GTP-binding protein [Citrobacter rodentium ICC168] Length = 490 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 11/159 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P Sbjct: 192 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP----- 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G R K D+ +++ L V L+ID R G+ Sbjct: 245 MERDEREYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 D + F+ S IV+ K D LS ++ E + Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIARH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIHPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|156932946|ref|YP_001436862.1| GTP-binding protein EngA [Cronobacter sakazakii ATCC BAA-894] gi|166198713|sp|A7MGU7|DER_ENTS8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|156531200|gb|ABU76026.1| hypothetical protein ESA_00749 [Cronobacter sakazakii ATCC BAA-894] Length = 492 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 9/152 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 200 PQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRD-SIYIP-----MERDGR 252 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 253 EFVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 310 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + S IV+ K D LS +E E Y Sbjct: 311 ILNSGRSLVIVVNKWDGLSQEVKEEVKETLDY 342 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGSEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A Y E+ P ++ +G+ L + Sbjct: 106 LRSRQKPTFLVANKTDGLDPDQAVSDF---------YSLGLGEIHPIAASHGRGVTSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|159029809|emb|CAO90863.1| trmE [Microcystis aeruginosa PCC 7806] Length = 457 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 29/193 (15%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G L ++G ++A GR NVGKSSL+N +R + A ++ PG T+ + + + Sbjct: 214 ERGELLRSGL-KVAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDI-----VESQLV 266 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 +P L D G R+ V+ G R ++ + L V L + G + D+ Sbjct: 267 VAGIPVQVL-DTAGI---RSASDRVEQIGVERSRQTAQSADL--VLLTVSAESGWTEEDE 320 Query: 140 DVF-SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +++ S D++ + +V+ KID ++P T YP V+ S+V+ +G Sbjct: 321 EIYRSVSDRRLI---LVINKIDLVNPETV------------IYPAEIERVVKISAVQNQG 365 Query: 199 IEVLRKAILETIN 211 IE L K I+ + Sbjct: 366 IEDLEKTIINAVQ 378 >gi|299144155|ref|ZP_07037235.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518640|gb|EFI42379.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 296 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 19/181 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N +V +K ++ SN T++ F+ D + +D Sbjct: 7 VTIIGRPNVGKSTLLNCIVGQK-ISAISNKAQTTRNKITFIYTD------EKMQVIFLDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + PK + + ++ S S + + ++DC + ++D + L +K + Sbjct: 60 PG---IQMPKNKLGDY--MLKVSESTLSEVDVITYIVDCSKKIGKLDNYIIKELKEKNLK 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAILET 209 IVL ++K+ +E E +I+ Y E+IP S++K G+E K + + Sbjct: 115 TPIVLL-VNKIDEVAKEELFE----IIKMYDDIGIFKEIIPISALKNDGVESYLKTLAKY 169 Query: 210 I 210 I Sbjct: 170 I 170 >gi|329897033|ref|ZP_08271805.1| GTP-binding protein EngA [gamma proteobacterium IMCC3088] gi|328921473|gb|EGG28859.1| GTP-binding protein EngA [gamma proteobacterium IMCC3088] Length = 463 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 30/147 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF---------FVPKDFSNLK 80 P IA GR NVGKS+L N L ++ A ++ G T+ + +V D + Sbjct: 3 PVIALMGRPNVGKSTLFNQLTRSRD-ALVADFSGLTRDRKYGEGKVGERPYVVIDTGGIT 61 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D+P + A D V L++D R G+ +DQ+ Sbjct: 62 GDENG---IDLPMAQQSMAAADEAD-----------------IVLLILDARAGLTGVDQE 101 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTA 167 + S L ++++ + +V+ KID ++ TA Sbjct: 102 LVSLLRRQSIPFHVVVNKIDGMNSDTA 128 Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 EI +A ++A GR NVGKS+L+N ++ + + + PG T+ + DF Sbjct: 166 EITAEEQAHGIKVAIVGRPNVGKSTLVNRMLGEERVV-VYDHPGTTRDSVYI---DFERE 221 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 L+D G + K++V+ + IV+ L V LL+D G+ D Sbjct: 222 GEQY---TLIDTAGVRRRKNVKESVEKFS--IVKTLKAIDDSNVVLLLMDAHEGIVDQDM 276 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLS 163 + + + +V+ K D L Sbjct: 277 HLLGHCIEAGRALVVVVNKWDGLD 300 >gi|315300482|gb|EFU59711.1| ribosome-associated GTPase EngA [Escherichia coli MS 16-3] Length = 499 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRE-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 349 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|297545652|ref|YP_003677954.1| tRNA modification GTPase TrmE [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843427|gb|ADH61943.1| tRNA modification GTPase TrmE [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 462 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 23/178 (12%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 228 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYINVK-GIP-IKLIDTA 280 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R + + ++D + + D +F L +K + + Sbjct: 281 GI---RDTDELVEKIG--VERSKEVLAEADLILFVLDASRELSEEDYQIFDILTEKNIIF 335 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 VL KID P E+ K K LI++ +I S+V+R G+E L AI + + Sbjct: 336 --VLNKID--LPKKIDES--KLKSLIKDGI-----IIEVSTVERIGLEKLENAIYDLV 382 >gi|289579530|ref|YP_003478157.1| tRNA modification GTPase TrmE [Thermoanaerobacter italicus Ab9] gi|289529243|gb|ADD03595.1| tRNA modification GTPase TrmE [Thermoanaerobacter italicus Ab9] Length = 460 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 23/178 (12%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 226 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYINVK-GIP-IKLIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R + + ++D + + D +F L +K + + Sbjct: 279 GI---RDTDELVEKIG--VERSKEVLAEADLILFVLDASRELSEEDYQIFDILTEKNIIF 333 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 VL KID P E+ K K LI++ +I S+V+R G+E L AI + + Sbjct: 334 --VLNKID--LPKKIDES--KLKSLIKDGI-----IIEVSTVERIGLEKLENAIYDLV 380 >gi|30248403|ref|NP_840473.1| tRNA modification GTPase TrmE [Nitrosomonas europaea ATCC 19718] gi|46577435|sp|Q82XA1|MNME_NITEU RecName: Full=tRNA modification GTPase mnmE gi|30138289|emb|CAD84297.1| GTP-binding protein (HSR1-related):tRNA modification GTPase TrmE [Nitrosomonas europaea ATCC 19718] Length = 451 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 25/181 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + +G+ NVGKSSL+N L +A ++ PG T+ V + +P + L+D Sbjct: 218 VVLAGQPNVGKSSLLNRLAG-DEVAIVTDIPGTTRD---TVRQSIE--IEGIP-LHLIDT 270 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G I R + V LL+D RHGV + D+ V + L ++ Sbjct: 271 AGL---RETSDIVEQHG--IARTYAAIEQADLVLLLVDSRHGVTEEDRSVLTRLPERLP- 324 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 VLT +K+ + LE+ T+ P I S++ +GIE+LR A+L+T Sbjct: 325 ---VLTVHNKIDLSAQPPRLEEN--------TSGP-TIYLSAINGEGIELLRAALLKTAG 372 Query: 212 Y 212 + Sbjct: 373 W 373 >gi|321310942|ref|YP_004193271.1| GTPase obg [Mycoplasma haemofelis str. Langford 1] gi|319802786|emb|CBY93432.1| GTPase obg [Mycoplasma haemofelis str. Langford 1] Length = 421 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 31/180 (17%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I F G+ N GKSSL++++ N K + ++ P T +P + + + D Sbjct: 161 DIGFLGKPNAGKSSLLSLISNAK--PKIASFPFTT-----LIPV-LGTVVHEDKKLVFAD 212 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK-KA 149 +PG +N GL +L + R + L+DC + ++ ++ S ++ KA Sbjct: 213 IPGL------IENASQGAGLGFEFLKHLNRCRVLVHLVDCSE--EDVENEILSIENEIKA 264 Query: 150 VSYQ-------IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 S + I L KID +S + + L+K + L R +VIP S +K K I+VL Sbjct: 265 YSEELFNKPRFICLNKIDLISDESLECILKKVELLGR-------QVIPVSVLKNKNIDVL 317 >gi|22002507|gb|AAM82659.1| TrmE [Synechococcus elongatus PCC 7942] Length = 482 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 22/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA GR NVGKSSL+N +R + A ++ PG T+ L + + +P L Sbjct: 244 PKIAIVGRPNVGKSSLLNAW-SRCDRAIVTDLPGTTRDL-----VESQLIVGGIPVQVL- 296 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R V+ G R ++ + L V L ID G DQ ++ + + Sbjct: 297 DTAGI---RETSDQVEQIGVERSRRAAQSADL--VLLTIDASAGWSAEDQTIWEAVSDRP 351 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +V+ K D+LS E ++ I ++ T++ +++GIE L AIL Sbjct: 352 I--LLVINKRDRLS--------EAERHAIALPQQEFKAIVWTAAAQQQGIEDLEAAILAA 401 Query: 210 IN 211 + Sbjct: 402 VG 403 >gi|170760623|ref|YP_001787836.1| GTP-binding protein EngA [Clostridium botulinum A3 str. Loch Maree] gi|238688523|sp|B1KX71|DER_CLOBM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169407612|gb|ACA56023.1| ribosome-associated GTPase EngA [Clostridium botulinum A3 str. Loch Maree] Length = 439 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V +F L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERLI-VSDIPGTTRDSIDSYVDTEFGEF-------TLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 G K+ ++ + +I Y S C+ L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTYASIERADVCI-LMIDAIEGISEQDQKIIGY 282 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 28/171 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L ++ +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-IAIVQDTPGVTRD-RIYAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G P+ +IV + ++ + + L+D + G+ D++V Sbjct: 55 MIDTGGI----EPESE-----DIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K +V+ KIDKL E Y N P I +S Sbjct: 106 QMLRKSKKPVVLVVNKIDKLKD-------ENNAYEFYNLGIGDPVTISSSQ 149 >gi|85059734|ref|YP_455436.1| GTP-binding protein EngA [Sodalis glossinidius str. 'morsitans'] gi|123519082|sp|Q2NS44|DER_SODGM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|84780254|dbj|BAE75031.1| putative GTP-binding protein [Sodalis glossinidius str. 'morsitans'] Length = 488 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P + + Sbjct: 196 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MVRDER 248 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 249 EYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 306 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + S I + K D LS T E E + Sbjct: 307 ILNSGRSLVIAVNKWDGLSSETRDEVKEALDH 338 >gi|331658656|ref|ZP_08359600.1| ribosome-associated GTPase EngA [Escherichia coli TA206] gi|331054321|gb|EGI26348.1| ribosome-associated GTPase EngA [Escherichia coli TA206] Length = 396 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 211 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 263 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 264 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 320 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 321 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 353 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 16 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 59 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKH 118 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 119 LRSREKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLE 169 Query: 205 AIL 207 +L Sbjct: 170 HVL 172 >gi|292656060|ref|YP_003535957.1| GTP-binding protein [Haloferax volcanii DS2] gi|291370408|gb|ADE02635.1| GTP-binding protein [Haloferax volcanii DS2] Length = 205 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 22/146 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI GRSNVGKS+L+ L T PG T+ N F N D Sbjct: 10 EIVLVGRSNVGKSTLMRELTGHSKFT-TGKKPGVTRKPNHF--------DWNAEKFMFTD 60 Query: 91 MPGYGYARAPKKNV-DSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQ--------- 139 +PG+G+ ++ ++ +V+Y+ E + + L++D + + ID+ Sbjct: 61 LPGFGFMSGVDRDTREAIKTDVVQYIEEHADDILAAVLVVDGKSVIDIIDRHTTEDSIPH 120 Query: 140 --DVFSFLDKKAVSYQIVLTKIDKLS 163 ++F FLD+ + + + K+DK+ Sbjct: 121 DVEMFFFLDELDIPTVVAVNKMDKVD 146 >gi|237732490|ref|ZP_04562971.1| GTP-binding protein EngA [Citrobacter sp. 30_2] gi|226908029|gb|EEH93947.1| GTP-binding protein EngA [Citrobacter sp. 30_2] Length = 504 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 9/158 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P Sbjct: 206 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP----- 258 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 259 MQRDEREYVLIDTAGVRKRGKITEAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQD 316 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + F+ S IV+ K D L+ ++ E + Sbjct: 317 LSLLGFILNSGRSLVIVVNKWDGLTQEVKEQVKETLDF 354 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 17 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 59 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 60 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 119 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 120 LRSRQKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 170 Query: 205 AIL 207 +L Sbjct: 171 HVL 173 >gi|81246371|gb|ABB67079.1| putative GTP-binding factor [Shigella boydii Sb227] Length = 503 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 211 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 263 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 264 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 320 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 321 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 353 Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 16 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 59 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 118 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V+ K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 119 LRSREKPTFLVVNKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 169 Query: 205 AIL 207 +L Sbjct: 170 HVL 172 >gi|323977306|gb|EGB72392.1| ribosome GTPase EngA [Escherichia coli TW10509] Length = 490 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|300904315|ref|ZP_07122172.1| ribosome-associated GTPase EngA [Escherichia coli MS 84-1] gi|300403747|gb|EFJ87285.1| ribosome-associated GTPase EngA [Escherichia coli MS 84-1] Length = 492 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 349 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|32186993|gb|AAP73740.1| EngA [Escherichia coli] Length = 369 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 77 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 129 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 130 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 186 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 187 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 219 >gi|325496456|gb|EGC94315.1| putative GTP-binding factor [Escherichia fergusonii ECD227] Length = 499 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 349 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|187731692|ref|YP_001881302.1| GTP-binding protein EngA [Shigella boydii CDC 3083-94] gi|238691721|sp|B2TXT6|DER_SHIB3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|187428684|gb|ACD07958.1| ribosome-associated GTPase EngA [Shigella boydii CDC 3083-94] Length = 490 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V KID L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKIDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|325280484|ref|YP_004253026.1| tRNA modification GTPase mnmE [Odoribacter splanchnicus DSM 20712] gi|324312293|gb|ADY32846.1| tRNA modification GTPase mnmE [Odoribacter splanchnicus DSM 20712] Length = 464 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 26/195 (13%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G + K G P +A G +NVGKS+L+N L+ R++ A S+ G T+ V +D NL Sbjct: 214 LGNVIKNGVP-VAIVGNTNVGKSTLLNALL-REDRAIVSDIAGTTRD----VIEDTINL- 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ- 139 N +D G RA V++ G I R ++ V LL D GV+ ++ Sbjct: 267 -NGITFRFIDTAGI---RATSDEVENIG--IERTFAKIGQASVVLLLTDLNRGVESFEEY 320 Query: 140 --DVFSFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 V S L A IVL K D++ T QET IR + T+ E+IP S+ Sbjct: 321 YHQVKSRLTSDA-KLIIVLNKTDQVEDLLTPQET-------IRLF-TSGEEIIPISARTG 371 Query: 197 KGIEVLRKAILETIN 211 ++ L + + T+N Sbjct: 372 ANLDRLIQELTRTVN 386 >gi|313109793|ref|ZP_07795731.1| selenocysteine-specific elongation factor [Pseudomonas aeruginosa 39016] gi|310882233|gb|EFQ40827.1| selenocysteine-specific elongation factor [Pseudomonas aeruginosa 39016] Length = 641 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +G + GK+SL+ L + R + G T L + +++L + P +D Sbjct: 3 VGTAGHIDHGKTSLLRALTGIEGDRRPAERQRGITIDLGYL----YADLGDGSPT-GFID 57 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ + L+ S + CV L++ G+ ++ + ++ + Sbjct: 58 VPGHER-------------FVHNMLAGASGIDCVLLVVAADDGLMPQTREHLAIVELLGI 104 Query: 151 SYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V LTKID++ P Q+ + ++L+ + P A + P SS +G+E LR+A+ Sbjct: 105 RRALVALTKIDRVEPQRVQQVRTQVEHLLASGPLARSPIFPLSSSTGEGVEALREAL 161 >gi|300820819|ref|ZP_07100969.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7] gi|300927126|ref|ZP_07142874.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1] gi|300930151|ref|ZP_07145572.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1] gi|300951784|ref|ZP_07165599.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1] gi|300958859|ref|ZP_07170967.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1] gi|301302868|ref|ZP_07208996.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1] gi|301330398|ref|ZP_07223040.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1] gi|301648266|ref|ZP_07248009.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1] gi|309794442|ref|ZP_07688865.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7] gi|300314511|gb|EFJ64295.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1] gi|300416896|gb|EFK00207.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1] gi|300448981|gb|EFK12601.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1] gi|300461957|gb|EFK25450.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1] gi|300526572|gb|EFK47641.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7] gi|300841803|gb|EFK69563.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1] gi|300843627|gb|EFK71387.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1] gi|301073653|gb|EFK88459.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1] gi|308121898|gb|EFO59160.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7] gi|315256531|gb|EFU36499.1| ribosome-associated GTPase EngA [Escherichia coli MS 85-1] gi|324020071|gb|EGB89290.1| ribosome-associated GTPase EngA [Escherichia coli MS 117-3] Length = 499 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 349 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|218548052|ref|YP_002381843.1| GTP-binding protein EngA [Escherichia fergusonii ATCC 35469] gi|331684159|ref|ZP_08384755.1| ribosome-associated GTPase EngA [Escherichia coli H299] gi|226741141|sp|B7LKC7|DER_ESCF3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218355593|emb|CAQ88204.1| GTPase involved in ribosome synthesis and maintenance [Escherichia fergusonii ATCC 35469] gi|323967959|gb|EGB63371.1| ribosome GTPase EngA [Escherichia coli M863] gi|327252218|gb|EGE63890.1| small GTP-binding domain protein [Escherichia coli STEC_7v] gi|331079111|gb|EGI50313.1| ribosome-associated GTPase EngA [Escherichia coli H299] Length = 490 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|30063903|ref|NP_838074.1| GTP-binding protein EngA [Shigella flexneri 2a str. 2457T] gi|110806442|ref|YP_689962.1| GTP-binding protein EngA [Shigella flexneri 5 str. 8401] gi|123146827|sp|Q0T208|DER_SHIF8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|30042158|gb|AAP17884.1| putative GTP-binding factor [Shigella flexneri 2a str. 2457T] gi|110615990|gb|ABF04657.1| putative GTP-binding factor [Shigella flexneri 5 str. 8401] gi|281601913|gb|ADA74897.1| GTP-binding protein engA [Shigella flexneri 2002017] gi|313650997|gb|EFS15397.1| small GTP-binding domain protein [Shigella flexneri 2a str. 2457T] gi|332754198|gb|EGJ84566.1| small GTP-binding domain protein [Shigella flexneri 4343-70] gi|332755561|gb|EGJ85925.1| small GTP-binding domain protein [Shigella flexneri K-671] gi|332756305|gb|EGJ86656.1| small GTP-binding domain protein [Shigella flexneri 2747-71] gi|332766344|gb|EGJ96554.1| small GTP-binding domain protein [Shigella flexneri 2930-71] gi|333001904|gb|EGK21470.1| small GTP-binding domain protein [Shigella flexneri K-218] gi|333016427|gb|EGK35758.1| small GTP-binding domain protein [Shigella flexneri K-304] Length = 490 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 38.1 bits (87), Expect = 0.84, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V+ K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVVNKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|15600001|ref|NP_253495.1| selenocysteine-specific elongation factor [Pseudomonas aeruginosa PAO1] gi|107103904|ref|ZP_01367822.1| hypothetical protein PaerPA_01004975 [Pseudomonas aeruginosa PACS2] gi|218893900|ref|YP_002442769.1| selenocysteine-specific elongation factor [Pseudomonas aeruginosa LESB58] gi|9951074|gb|AAG08193.1|AE004893_11 selenocysteine-specific elongation factor [Pseudomonas aeruginosa PAO1] gi|218774128|emb|CAW29945.1| selenocysteine-specific elongation factor [Pseudomonas aeruginosa LESB58] Length = 641 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +G + GK+SL+ L + R + G T L + +++L + P +D Sbjct: 3 VGTAGHIDHGKTSLLRALTGIEGDRRPAERQRGITIDLGYL----YADLGDGSPT-GFID 57 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ + L+ S + CV L++ G+ ++ + ++ + Sbjct: 58 VPGHER-------------FVHNMLAGASGIDCVLLVVAADDGLMPQTREHLAIVELLGI 104 Query: 151 SYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V LTKID++ P Q+ + ++L+ + P A + P SS +G+E LR+A+ Sbjct: 105 RRALVALTKIDRVEPQRVQQVRTQVEHLLASGPLARSPIFPLSSSTGEGVEALREAL 161 >gi|193068430|ref|ZP_03049393.1| ribosome-associated GTPase EngA [Escherichia coli E110019] gi|192958382|gb|EDV88822.1| ribosome-associated GTPase EngA [Escherichia coli E110019] Length = 490 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|324113005|gb|EGC06981.1| ribosome GTPase EngA [Escherichia fergusonii B253] Length = 490 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|56480123|ref|NP_708350.2| GTP-binding protein EngA [Shigella flexneri 2a str. 301] gi|161984887|ref|YP_408907.2| GTP-binding protein EngA [Shigella boydii Sb227] gi|56383674|gb|AAN44057.2| putative GTP-binding factor [Shigella flexneri 2a str. 301] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V+ K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVVNKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|320185211|gb|EFW59991.1| GTP-binding protein EngA [Shigella flexneri CDC 796-83] gi|332092745|gb|EGI97814.1| small GTP-binding domain protein [Shigella boydii 3594-74] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|161986480|ref|YP_311456.2| GTP-binding protein EngA [Shigella sonnei Ss046] gi|323169045|gb|EFZ54722.1| small GTP-binding domain protein [Shigella sonnei 53G] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDTNVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 RVL 159 >gi|89109317|ref|AP_003097.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr. W3110] gi|90111450|ref|NP_417006.2| GTPase; multicopy suppressor of ftsJ [Escherichia coli str. K-12 substr. MG1655] gi|157156728|ref|YP_001463833.1| GTP-binding protein EngA [Escherichia coli E24377A] gi|157161986|ref|YP_001459304.1| GTP-binding protein EngA [Escherichia coli HS] gi|161367551|ref|NP_289064.2| GTP-binding protein EngA [Escherichia coli O157:H7 EDL933] gi|162139766|ref|NP_311400.2| GTP-binding protein EngA [Escherichia coli O157:H7 str. Sakai] gi|168748430|ref|ZP_02773452.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4113] gi|168756283|ref|ZP_02781290.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4401] gi|168761121|ref|ZP_02786128.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4501] gi|168768603|ref|ZP_02793610.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4486] gi|168773575|ref|ZP_02798582.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4196] gi|168778477|ref|ZP_02803484.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4076] gi|168787857|ref|ZP_02812864.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC869] gi|168798882|ref|ZP_02823889.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC508] gi|170019206|ref|YP_001724160.1| GTP-binding protein EngA [Escherichia coli ATCC 8739] gi|170082121|ref|YP_001731441.1| GTP-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|188494621|ref|ZP_03001891.1| GTP-binding protein EngA [Escherichia coli 53638] gi|191167672|ref|ZP_03029481.1| ribosome-associated GTPase EngA [Escherichia coli B7A] gi|193064026|ref|ZP_03045111.1| ribosome-associated GTPase EngA [Escherichia coli E22] gi|194427302|ref|ZP_03059852.1| ribosome-associated GTPase EngA [Escherichia coli B171] gi|194437572|ref|ZP_03069668.1| ribosome-associated GTPase EngA [Escherichia coli 101-1] gi|195936653|ref|ZP_03082035.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC4024] gi|208814338|ref|ZP_03255667.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4045] gi|208821434|ref|ZP_03261754.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4042] gi|209399678|ref|YP_002271981.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4115] gi|209919988|ref|YP_002294072.1| GTP-binding protein EngA [Escherichia coli SE11] gi|217326913|ref|ZP_03442996.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. TW14588] gi|218555036|ref|YP_002387949.1| GTP-binding protein EngA [Escherichia coli IAI1] gi|218696138|ref|YP_002403805.1| GTP-binding protein EngA [Escherichia coli 55989] gi|238901676|ref|YP_002927472.1| putative GTP-binding protein [Escherichia coli BW2952] gi|253772595|ref|YP_003035426.1| GTP-binding protein EngA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162485|ref|YP_003045593.1| GTP-binding protein EngA [Escherichia coli B str. REL606] gi|254794457|ref|YP_003079294.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. TW14359] gi|256017341|ref|ZP_05431206.1| GTP-binding protein EngA [Shigella sp. D9] gi|256021803|ref|ZP_05435668.1| GTP-binding protein EngA [Escherichia sp. 4_1_40B] gi|260845141|ref|YP_003222919.1| putative GTP-binding protein Der [Escherichia coli O103:H2 str. 12009] gi|260856605|ref|YP_003230496.1| putative GTP-binding protein Der [Escherichia coli O26:H11 str. 11368] gi|260869200|ref|YP_003235602.1| putative GTP-binding protein Der [Escherichia coli O111:H- str. 11128] gi|261223057|ref|ZP_05937338.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Escherichia coli O157:H7 str. FRIK2000] gi|261259392|ref|ZP_05951925.1| putative GTP-binding protein Der [Escherichia coli O157:H7 str. FRIK966] gi|291283732|ref|YP_003500550.1| GTP-binding protein engA [Escherichia coli O55:H7 str. CB9615] gi|293415776|ref|ZP_06658419.1| ribosome-associated GTPase EngA [Escherichia coli B185] gi|293446864|ref|ZP_06663286.1| ribosome-associated GTPase EngA [Escherichia coli B088] gi|301022369|ref|ZP_07186258.1| ribosome-associated GTPase EngA [Escherichia coli MS 196-1] gi|307139146|ref|ZP_07498502.1| GTP-binding protein EngA [Escherichia coli H736] gi|307312494|ref|ZP_07592127.1| ribosome-associated GTPase EngA [Escherichia coli W] gi|312973248|ref|ZP_07787420.1| small GTP-binding domain protein [Escherichia coli 1827-70] gi|331669257|ref|ZP_08370105.1| ribosome-associated GTPase EngA [Escherichia coli TA271] gi|68566316|sp|P0A6P5|DER_ECOLI RecName: Full=GTPase Der; AltName: Full=Double era-like domain protein; AltName: Full=GTP-binding protein EngA gi|68566317|sp|P0A6P6|DER_ECO57 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166920098|sp|A7ZPV4|DER_ECO24 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166920099|sp|A8A317|DER_ECOHS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189037147|sp|B1IWF0|DER_ECOLC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226741138|sp|B7M7L5|DER_ECO8A RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|229784133|sp|B1XAY6|DER_ECODH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238058973|sp|B5Z0Y0|DER_ECO5E RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238058974|sp|B6I583|DER_ECOSE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783153|sp|B7LCQ1|DER_ECO55 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|259645873|sp|C4ZX86|DER_ECOBW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|85675433|dbj|BAA16397.2| predicted GTP-binding protein [Escherichia coli str. K12 substr. W3110] gi|87082120|gb|AAC75564.2| GTPase; multicopy suppressor of ftsJ [Escherichia coli str. K-12 substr. MG1655] gi|157067666|gb|ABV06921.1| GTP-binding protein EngA [Escherichia coli HS] gi|157078758|gb|ABV18466.1| GTP-binding protein EngA [Escherichia coli E24377A] gi|169754134|gb|ACA76833.1| small GTP-binding protein [Escherichia coli ATCC 8739] gi|169889956|gb|ACB03663.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|187770576|gb|EDU34420.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4196] gi|188017037|gb|EDU55159.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4113] gi|188489820|gb|EDU64923.1| GTP-binding protein EngA [Escherichia coli 53638] gi|189003270|gb|EDU72256.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4076] gi|189356591|gb|EDU75010.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4401] gi|189362188|gb|EDU80607.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4486] gi|189368460|gb|EDU86876.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4501] gi|189372347|gb|EDU90763.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC869] gi|189378586|gb|EDU97002.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC508] gi|190902271|gb|EDV62011.1| ribosome-associated GTPase EngA [Escherichia coli B7A] gi|192929261|gb|EDV82870.1| ribosome-associated GTPase EngA [Escherichia coli E22] gi|194414623|gb|EDX30895.1| ribosome-associated GTPase EngA [Escherichia coli B171] gi|194423378|gb|EDX39369.1| ribosome-associated GTPase EngA [Escherichia coli 101-1] gi|208735615|gb|EDZ84302.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4045] gi|208741557|gb|EDZ89239.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4042] gi|209161078|gb|ACI38511.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4115] gi|209913247|dbj|BAG78321.1| putative GTP-binding protein [Escherichia coli SE11] gi|217319280|gb|EEC27705.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. TW14588] gi|218352870|emb|CAU98669.1| GTPase involved in ribosome synthesis and maintenance [Escherichia coli 55989] gi|218361804|emb|CAQ99403.1| GTPase involved in ribosome synthesis and maintenance [Escherichia coli IAI1] gi|238862452|gb|ACR64450.1| predicted GTP-binding protein [Escherichia coli BW2952] gi|242378109|emb|CAQ32882.1| 50S ribosomal subunit stability factor [Escherichia coli BL21(DE3)] gi|253323639|gb|ACT28241.1| small GTP-binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974386|gb|ACT40057.1| GTP-binding protein EngA [Escherichia coli B str. REL606] gi|253978553|gb|ACT44223.1| GTP-binding protein EngA [Escherichia coli BL21(DE3)] gi|254593857|gb|ACT73218.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Escherichia coli O157:H7 str. TW14359] gi|257755254|dbj|BAI26756.1| predicted GTP-binding protein Der [Escherichia coli O26:H11 str. 11368] gi|257760288|dbj|BAI31785.1| predicted GTP-binding protein Der [Escherichia coli O103:H2 str. 12009] gi|257765556|dbj|BAI37051.1| predicted GTP-binding protein Der [Escherichia coli O111:H- str. 11128] gi|260448409|gb|ACX38831.1| small GTP-binding protein [Escherichia coli DH1] gi|290763605|gb|ADD57566.1| GTP-binding protein engA [Escherichia coli O55:H7 str. CB9615] gi|291323694|gb|EFE63122.1| ribosome-associated GTPase EngA [Escherichia coli B088] gi|291433424|gb|EFF06403.1| ribosome-associated GTPase EngA [Escherichia coli B185] gi|299881282|gb|EFI89493.1| ribosome-associated GTPase EngA [Escherichia coli MS 196-1] gi|306907417|gb|EFN37921.1| ribosome-associated GTPase EngA [Escherichia coli W] gi|309702843|emb|CBJ02174.1| GTP-binding protein [Escherichia coli ETEC H10407] gi|310331843|gb|EFP99078.1| small GTP-binding domain protein [Escherichia coli 1827-70] gi|315061830|gb|ADT76157.1| predicted GTP-binding protein [Escherichia coli W] gi|315137135|dbj|BAJ44294.1| GTP-binding protein engA [Escherichia coli DH1] gi|315615770|gb|EFU96402.1| small GTP-binding domain protein [Escherichia coli 3431] gi|320180501|gb|EFW55432.1| GTP-binding protein EngA [Shigella boydii ATCC 9905] gi|320188844|gb|EFW63503.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC1212] gi|320200075|gb|EFW74664.1| GTP-binding protein EngA [Escherichia coli EC4100B] gi|320640855|gb|EFX10343.1| GTP-binding protein Der [Escherichia coli O157:H7 str. G5101] gi|320646298|gb|EFX15225.1| GTP-binding protein Der [Escherichia coli O157:H- str. 493-89] gi|320651803|gb|EFX20183.1| GTP-binding protein Der [Escherichia coli O157:H- str. H 2687] gi|320657189|gb|EFX24998.1| GTP-binding protein Der [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662795|gb|EFX30127.1| GTP-binding protein Der [Escherichia coli O55:H7 str. USDA 5905] gi|320667599|gb|EFX34514.1| GTP-binding protein Der [Escherichia coli O157:H7 str. LSU-61] gi|323156165|gb|EFZ42324.1| small GTP-binding domain protein [Escherichia coli EPECa14] gi|323159381|gb|EFZ45366.1| small GTP-binding domain protein [Escherichia coli E128010] gi|323170218|gb|EFZ55871.1| small GTP-binding domain protein [Escherichia coli LT-68] gi|323177365|gb|EFZ62953.1| small GTP-binding domain protein [Escherichia coli 1180] gi|323184428|gb|EFZ69803.1| small GTP-binding domain protein [Escherichia coli 1357] gi|323377589|gb|ADX49857.1| ribosome-associated GTPase EngA [Escherichia coli KO11] gi|323936404|gb|EGB32694.1| ribosome-associated GTPase EngA [Escherichia coli E1520] gi|323941227|gb|EGB37412.1| ribosome GTPase EngA [Escherichia coli E482] gi|323944733|gb|EGB40800.1| ribosome-associated GTPase EngA [Escherichia coli H120] gi|323971076|gb|EGB66324.1| ribosome GTPase EngA [Escherichia coli TA007] gi|324118145|gb|EGC12042.1| ribosome GTPase EngA [Escherichia coli E1167] gi|326340309|gb|EGD64113.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1125] gi|326344993|gb|EGD68737.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1044] gi|331064451|gb|EGI36362.1| ribosome-associated GTPase EngA [Escherichia coli TA271] gi|332344383|gb|AEE57717.1| conserved hypothetical protein [Escherichia coli UMNK88] gi|333000699|gb|EGK20275.1| small GTP-binding domain protein [Shigella flexneri VA-6] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|301024743|ref|ZP_07188383.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1] gi|300396412|gb|EFJ79950.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1] Length = 499 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQDVKEQVKETLDF 349 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|161950068|ref|YP_404245.2| GTP-binding protein EngA [Shigella dysenteriae Sd197] gi|309784738|ref|ZP_07679371.1| small GTP-binding domain protein [Shigella dysenteriae 1617] gi|308927108|gb|EFP72582.1| small GTP-binding domain protein [Shigella dysenteriae 1617] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|46447114|ref|YP_008479.1| hypothetical protein pc1480 [Candidatus Protochlamydia amoebophila UWE25] gi|81697623|sp|Q6MB45|DER_PARUW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|46400755|emb|CAF24204.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 487 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 13/131 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNF-FVPKDFSNLKNNLPAMALV 89 +A GR+NVGKSSL+N L++ ++ S PG T+ ++ F KD L+ Sbjct: 180 VAIVGRANVGKSSLVNYLLD-EDRCIVSPIPGTTRDSVDISFTHKD--------ECYTLI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G RA + VD + + ER+ L CV L++D + G+ D+ + + +++ Sbjct: 231 DTAGIRRKRAEHEVVDKFAAIRTERAIERADL-CV-LMLDVQEGITAQDKKIANTIEEAG 288 Query: 150 VSYQIVLTKID 160 I+L K D Sbjct: 289 QGCIILLNKWD 299 >gi|194432132|ref|ZP_03064421.1| ribosome-associated GTPase EngA [Shigella dysenteriae 1012] gi|194419661|gb|EDX35741.1| ribosome-associated GTPase EngA [Shigella dysenteriae 1012] gi|332089695|gb|EGI94796.1| small GTP-binding domain protein [Shigella dysenteriae 155-74] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|315288063|gb|EFU47463.1| ribosome-associated GTPase EngA [Escherichia coli MS 110-3] gi|324008519|gb|EGB77738.1| ribosome-associated GTPase EngA [Escherichia coli MS 57-2] Length = 499 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 349 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|300898385|ref|ZP_07116728.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1] gi|300940238|ref|ZP_07154836.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1] gi|300357925|gb|EFJ73795.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1] gi|300454934|gb|EFK18427.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1] Length = 499 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 349 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|227887546|ref|ZP_04005351.1| GTP-binding protein [Escherichia coli 83972] gi|300981973|ref|ZP_07175819.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1] gi|300998067|ref|ZP_07181927.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1] gi|301047143|ref|ZP_07194239.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1] gi|227835896|gb|EEJ46362.1| GTP-binding protein [Escherichia coli 83972] gi|300300945|gb|EFJ57330.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1] gi|300304046|gb|EFJ58566.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1] gi|300408868|gb|EFJ92406.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1] gi|315292449|gb|EFU51801.1| ribosome-associated GTPase EngA [Escherichia coli MS 153-1] gi|324011217|gb|EGB80436.1| ribosome-associated GTPase EngA [Escherichia coli MS 60-1] Length = 499 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 349 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|73856514|gb|AAZ89221.1| putative GTP-binding factor [Shigella sonnei Ss046] Length = 503 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 211 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 263 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 264 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDTNVVMLVIDAREGISDQDLSLLG 320 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 321 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 353 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 16 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 59 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 118 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 119 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 169 Query: 205 AIL 207 +L Sbjct: 170 RVL 172 >gi|110642676|ref|YP_670406.1| GTP-binding protein EngA [Escherichia coli 536] gi|161486155|ref|NP_754915.2| GTP-binding protein EngA [Escherichia coli CFT073] gi|191172582|ref|ZP_03034121.1| ribosome-associated GTPase EngA [Escherichia coli F11] gi|218701021|ref|YP_002408650.1| GTP-binding protein EngA [Escherichia coli IAI39] gi|312965427|ref|ZP_07779659.1| small GTP-binding domain protein [Escherichia coli 2362-75] gi|31563151|sp|Q8FF59|DER_ECOL6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123147831|sp|Q0TEX4|DER_ECOL5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226741137|sp|B7NQW0|DER_ECO7I RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|110344268|gb|ABG70505.1| probable GTP-binding protein EngA [Escherichia coli 536] gi|190907055|gb|EDV66655.1| ribosome-associated GTPase EngA [Escherichia coli F11] gi|218371007|emb|CAR18835.1| GTPase involved in ribosome synthesis and maintenance [Escherichia coli IAI39] gi|281179565|dbj|BAI55895.1| putative GTP-binding protein [Escherichia coli SE15] gi|307554534|gb|ADN47309.1| GTP-binding protein EngA [Escherichia coli ABU 83972] gi|312289847|gb|EFR17735.1| small GTP-binding domain protein [Escherichia coli 2362-75] gi|320196348|gb|EFW70972.1| GTP-binding protein EngA [Escherichia coli WV_060327] gi|323188371|gb|EFZ73663.1| small GTP-binding domain protein [Escherichia coli RN587/1] gi|330912286|gb|EGH40796.1| GTP-binding protein EngA [Escherichia coli AA86] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|332087958|gb|EGI93083.1| small GTP-binding domain protein [Shigella boydii 5216-82] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|257064001|ref|YP_003143673.1| GTP-binding protein Era [Slackia heliotrinireducens DSM 20476] gi|256791654|gb|ACV22324.1| GTP-binding protein Era [Slackia heliotrinireducens DSM 20476] Length = 301 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 17/151 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 + GR N GKS+LIN +V K +A TSN T+H + V +D + +VD Sbjct: 10 VTLVGRPNAGKSTLINAVVGHK-VAITSNTAQTTRHRFSAIVTRDDMQI-------IMVD 61 Query: 91 MPGYGYARAPKKNVDSWGG-LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG K D+ G L + + V +LIDC + + D+ V + +++ Sbjct: 62 TPGL------HKPHDALGQELNTSAIKAMEDVDVVAMLIDCSKPIGRGDEWVAAQVNEVH 115 Query: 150 VSYQI-VLTKIDKLSPTTAQETLEKTKYLIR 179 ++I +LTK D + P +E ++ K L R Sbjct: 116 APHKILILTKADLVEPKVIEEQMKAAKRLAR 146 >gi|215487861|ref|YP_002330292.1| GTP-binding protein EngA [Escherichia coli O127:H6 str. E2348/69] gi|254783152|sp|B7UGV7|DER_ECO27 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|215265933|emb|CAS10342.1| predicted GTP-binding protein [Escherichia coli O127:H6 str. E2348/69] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|81242044|gb|ABB62754.1| putative GTP-binding factor [Shigella dysenteriae Sd197] Length = 503 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 211 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 263 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 264 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 320 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 321 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 353 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 16 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 59 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 118 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 119 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 169 Query: 205 AIL 207 +L Sbjct: 170 HVL 172 >gi|293410925|ref|ZP_06654501.1| ribosome-associated GTPase EngA [Escherichia coli B354] gi|291471393|gb|EFF13877.1| ribosome-associated GTPase EngA [Escherichia coli B354] Length = 499 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 349 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTENGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|170681267|ref|YP_001744699.1| GTP-binding protein EngA [Escherichia coli SMS-3-5] gi|218706014|ref|YP_002413533.1| GTP-binding protein EngA [Escherichia coli UMN026] gi|293405952|ref|ZP_06649944.1| GTP-binding protein engA [Escherichia coli FVEC1412] gi|298381753|ref|ZP_06991352.1| GTP-binding protein engA [Escherichia coli FVEC1302] gi|331664074|ref|ZP_08364984.1| ribosome-associated GTPase EngA [Escherichia coli TA143] gi|226741139|sp|B7N699|DER_ECOLU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226741140|sp|B1LNG6|DER_ECOSM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|170518985|gb|ACB17163.1| GTP-binding protein EngA [Escherichia coli SMS-3-5] gi|218433111|emb|CAR14008.1| GTPase involved in ribosome synthesis and maintenance [Escherichia coli UMN026] gi|284922461|emb|CBG35548.1| GTP-binding protein [Escherichia coli 042] gi|291428160|gb|EFF01187.1| GTP-binding protein engA [Escherichia coli FVEC1412] gi|298279195|gb|EFI20709.1| GTP-binding protein engA [Escherichia coli FVEC1302] gi|323961327|gb|EGB56939.1| ribosome GTPase EngA [Escherichia coli H489] gi|331059873|gb|EGI31850.1| ribosome-associated GTPase EngA [Escherichia coli TA143] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|162138394|ref|YP_541823.2| GTP-binding protein EngA [Escherichia coli UTI89] gi|218559437|ref|YP_002392350.1| GTP-binding protein EngA [Escherichia coli S88] gi|218690631|ref|YP_002398843.1| GTP-binding protein EngA [Escherichia coli ED1a] gi|306814419|ref|ZP_07448581.1| GTP-binding protein EngA [Escherichia coli NC101] gi|226741136|sp|B7MHZ6|DER_ECO45 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783154|sp|B7MYE6|DER_ECO81 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218366206|emb|CAR03954.1| GTPase involved in ribosome synthesis and maintenance [Escherichia coli S88] gi|218428195|emb|CAR09112.2| GTPase involved in ribosome synthesis and maintenance [Escherichia coli ED1a] gi|222034222|emb|CAP76963.1| GTP-binding protein engA [Escherichia coli LF82] gi|294491525|gb|ADE90281.1| ribosome-associated GTPase EngA [Escherichia coli IHE3034] gi|305851813|gb|EFM52265.1| GTP-binding protein EngA [Escherichia coli NC101] gi|307625933|gb|ADN70237.1| GTP-binding protein EngA [Escherichia coli UM146] gi|312947088|gb|ADR27915.1| GTP-binding protein EngA [Escherichia coli O83:H1 str. NRG 857C] gi|323949171|gb|EGB45062.1| ribosome GTPase EngA [Escherichia coli H252] gi|323955752|gb|EGB51510.1| ribosome GTPase EngA [Escherichia coli H263] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|117624740|ref|YP_853653.1| GTP-binding protein EngA [Escherichia coli APEC O1] gi|237705021|ref|ZP_04535502.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA] gi|91073411|gb|ABE08292.1| probable GTP-binding protein EngA [Escherichia coli UTI89] gi|115513864|gb|ABJ01939.1| putative GTP-binding protein EngA [Escherichia coli APEC O1] gi|226901387|gb|EEH87646.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA] Length = 503 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 211 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 263 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 264 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 320 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 321 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 353 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 16 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 59 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKH 118 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 119 LRSREKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLE 169 Query: 205 AIL 207 +L Sbjct: 170 HVL 172 >gi|333002306|gb|EGK21870.1| small GTP-binding domain protein [Shigella flexneri K-272] gi|333016129|gb|EGK35461.1| small GTP-binding domain protein [Shigella flexneri K-227] Length = 490 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|307718980|ref|YP_003874512.1| GTP-binding protein EngA [Spirochaeta thermophila DSM 6192] gi|306532705|gb|ADN02239.1| GTP-binding protein EngA [Spirochaeta thermophila DSM 6192] Length = 450 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 13/185 (7%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G P A ++A G+ N GKS+L+N L+ + A S+APG T+ L Sbjct: 182 EGGDAPSAPEIDVAILGKPNTGKSTLLNTLLGEER-ALVSDAPGTTRDLLE------GRF 234 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + +VD G + +++ + + R L V+LLID + G+ + D+ Sbjct: 235 QYRGRWFRIVDTAGIRRRSRIEDDLEFYS--VRRSLKVIEEAHVVFLLIDAQEGLTEQDK 292 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRK 197 + + ++ +VL K D L+P Q + K IR + + ++ S+ + + Sbjct: 293 KIAAVAQRRGRGVILVLNKWDALTPVPNQ--FQAMKARIRFFFPHMDYAPIVKISARRGE 350 Query: 198 GIEVL 202 GI+ L Sbjct: 351 GIDKL 355 >gi|300920666|ref|ZP_07137077.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1] gi|300412347|gb|EFJ95657.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1] Length = 499 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 349 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAACHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|331648208|ref|ZP_08349298.1| ribosome-associated GTPase EngA [Escherichia coli M605] gi|26109281|gb|AAN81483.1|AE016764_165 Probable GTP-binding protein engA [Escherichia coli CFT073] gi|331043068|gb|EGI15208.1| ribosome-associated GTPase EngA [Escherichia coli M605] Length = 503 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 211 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 263 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 264 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 320 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 321 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 353 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 16 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 59 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 118 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 119 LRSREKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLE 169 Query: 205 AIL 207 +L Sbjct: 170 HVL 172 >gi|300712024|ref|YP_003737838.1| GTP-binding protein [Halalkalicoccus jeotgali B3] gi|299125707|gb|ADJ16046.1| GTP-binding protein [Halalkalicoccus jeotgali B3] Length = 206 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 34/197 (17%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIAF GRSNVGKS+L+ + T PG T+ N + D++ D Sbjct: 11 EIAFVGRSNVGKSTLMREFTG--HTFTTGKKPGVTRSPNHY---DWAGAD-----FTFTD 60 Query: 91 MPGYGYARAPKKNV-DSWGGLIVRYLSERSTLRCV-YLLIDCRHGVKQIDQ--------- 139 +PG+G+ ++ ++ IV+Y+ E S V L++D + + ID+ Sbjct: 61 LPGFGFMEGVEEGTREAIKTDIVQYIEEHSAEILVGVLVVDGKAVIDIIDRHSERGEVPH 120 Query: 140 --DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-----EVIPTS 192 ++F FL + + + + K+DK+ + E+ L P +V+ Sbjct: 121 DVEMFHFLREVEIPTVVAVNKMDKVD-----DRDERLDALCDRLGLPGPWQQWRDVVAPI 175 Query: 193 SVKRKGIEVLRKAILET 209 S KR I+ LR+A LET Sbjct: 176 SAKRGQIDPLREA-LET 191 >gi|150020700|ref|YP_001306054.1| GTP-binding protein Era [Thermosipho melanesiensis BI429] gi|189037682|sp|A6LL68|ERA_THEM4 RecName: Full=GTPase Era gi|149793221|gb|ABR30669.1| GTP-binding protein Era [Thermosipho melanesiensis BI429] Length = 299 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFF-VPKDFSNLKNNLPAMALV 89 +A +G+ NVGKSSL+N +V RK L S+ P T++ +N DF + V Sbjct: 6 VALAGKPNVGKSSLVNAIVGRKVLI-VSDKPQTTRNRINVIHTTNDFQ--------VIFV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG P + + ++ +S + + +ID + G+ + + VF ++++ Sbjct: 57 DTPG---IHKPLYRLGEY--MVKAAVSALKGVDLILTVIDAKEGIGKPEAFVFDYVNQSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V+ KID L T ETL+K ++ T ++ TS+ + +G + L I+E Sbjct: 112 TKTIGVINKID-LVGTEKVETLQK---IMEEKLTNCISIVKTSATRNEGTKELLDLIIEN 167 Query: 210 I 210 + Sbjct: 168 L 168 >gi|260598897|ref|YP_003211468.1| GTP-binding protein Der [Cronobacter turicensis z3032] gi|260218074|emb|CBA32819.1| GTP-binding protein engA [Cronobacter turicensis z3032] Length = 492 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 9/152 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 200 PQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRD-SIYIP-----MERDGR 252 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 253 EFVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 310 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + S IV+ K D LS E E Y Sbjct: 311 ILNSGRSLVIVVNKWDGLSQEVKDEVKETLDY 342 >gi|331643131|ref|ZP_08344266.1| ribosome-associated GTPase EngA [Escherichia coli H736] gi|331653939|ref|ZP_08354940.1| ribosome-associated GTPase EngA [Escherichia coli M718] gi|331678502|ref|ZP_08379177.1| ribosome-associated GTPase EngA [Escherichia coli H591] gi|332278336|ref|ZP_08390749.1| conserved hypothetical protein [Shigella sp. D9] gi|25328223|pir||E91050 probable GTP-binding factor [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) gi|25328252|pir||A85895 probable GTP-binding factor Z3774 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12516902|gb|AAG57621.1|AE005480_8 putative GTP-binding factor [Escherichia coli O157:H7 str. EDL933] gi|13362843|dbj|BAB36796.1| putative GTP-binding factor [Escherichia coli O157:H7 str. Sakai] gi|209763418|gb|ACI80021.1| putative GTP-binding factor [Escherichia coli] gi|209763420|gb|ACI80022.1| putative GTP-binding factor [Escherichia coli] gi|209763422|gb|ACI80023.1| putative GTP-binding factor [Escherichia coli] gi|209763426|gb|ACI80025.1| putative GTP-binding factor [Escherichia coli] gi|331039929|gb|EGI12149.1| ribosome-associated GTPase EngA [Escherichia coli H736] gi|331048788|gb|EGI20864.1| ribosome-associated GTPase EngA [Escherichia coli M718] gi|331074962|gb|EGI46282.1| ribosome-associated GTPase EngA [Escherichia coli H591] gi|332100688|gb|EGJ04034.1| conserved hypothetical protein [Shigella sp. D9] Length = 503 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 211 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 263 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 264 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 320 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 321 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 353 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 16 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 59 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 118 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 119 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 169 Query: 205 AIL 207 +L Sbjct: 170 HVL 172 >gi|113478139|ref|YP_724200.1| tRNA modification GTPase TrmE [Trichodesmium erythraeum IMS101] gi|123056073|sp|Q10VJ7|MNME_TRIEI RecName: Full=tRNA modification GTPase mnmE gi|110169187|gb|ABG53727.1| tRNA modification GTPase trmE [Trichodesmium erythraeum IMS101] Length = 467 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 24/182 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N + + A ++ PG T+ + + + +P L D Sbjct: 229 VAIIGRPNVGKSSLLNAW-SHSDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-DT 281 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + V+ G + R + V L ID + G ++D+ ++ + + + Sbjct: 282 AGI---RETEDRVEKIG--VERSCQAAESADIVLLTIDAQVGWTELDEVIYQQVKHRFLI 336 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +++ K+D++ ++ LIR+ YP V+ T+++ +GIE L AIL Sbjct: 337 --LIINKVDQVDLVHSE--------LIRSIFYPETIKNVVATAAINNQGIEELEAAILNA 386 Query: 210 IN 211 +N Sbjct: 387 VN 388 >gi|300717947|ref|YP_003742750.1| GTP-binding protein [Erwinia billingiae Eb661] gi|299063783|emb|CAX60903.1| GTP-binding protein [Erwinia billingiae Eb661] Length = 495 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 9/148 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+L N ++ + +APG T+ + ++P ++ + L Sbjct: 208 PIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDAPGTTRD-SIYIP-----MERDGREYIL 260 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L+ID R G+ D + F+ Sbjct: 261 IDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNS 318 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKY 176 S IV+ K D LS E E + Sbjct: 319 GRSLVIVVNKWDGLSQEVRDEVKETLDF 346 >gi|297588533|ref|ZP_06947176.1| ribosome-associated GTPase EngA [Finegoldia magna ATCC 53516] gi|297573906|gb|EFH92627.1| ribosome-associated GTPase EngA [Finegoldia magna ATCC 53516] Length = 438 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 30/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N L+ +K +A T + PG T+ ++ ++ N +V Sbjct: 4 PVVAIVGRANVGKSTLFNKLI-KKRIAITQDDPGVTRD-RLYMEAEWQN-----KYFTVV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G PK N +I + + +++ L + ++D + G+ ID +V Sbjct: 57 DTGGL----EPKSN-----EIITKNIKKQTELAIETADVILFMVDGKQGITPIDMEVADM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + S +V+ KID +++ + Y E+ P S+ G+ L + Sbjct: 108 LRRTKKSVILVVNKIDH---------IKQQDNVYDFYNLGFYEIFPISASNSMGLGDLLE 158 Query: 205 AIL 207 A++ Sbjct: 159 AVV 161 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 13/138 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G+ NVGKSSLIN L+N + + T A ++ + N K N +D Sbjct: 178 KVCLIGKPNVGKSSLINNLLNEERMIVTDIAGTTRDAIDSKI-----NYKGN--EYIFID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G R V+ + +VR LS +RS + CV L+ID GV + D + + + Sbjct: 231 TAGLRKRRKIDTEVERYS--VVRTLSAIDRSDI-CV-LMIDATEGVSEQDTKILGYAHDQ 286 Query: 149 AVSYQIVLTKIDKLSPTT 166 + I++ K D + T Sbjct: 287 GKAMIILVNKWDLVEKQT 304 >gi|169824551|ref|YP_001692162.1| GTP-binding protein [Finegoldia magna ATCC 29328] gi|238687753|sp|B0S1N2|DER_FINM2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|167831356|dbj|BAG08272.1| GTP-binding protein [Finegoldia magna ATCC 29328] Length = 438 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 30/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N L+ +K +A T + PG T+ ++ ++ N +V Sbjct: 4 PVVAIVGRANVGKSTLFNKLI-KKRIAITQDDPGVTRD-RLYMEAEWQN-----KYFTVV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G PK N +I + + +++ L + ++D + G+ ID +V Sbjct: 57 DTGGL----EPKSN-----EIITKNIKKQTELAIETADVILFMVDGKQGITPIDMEVADM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + S +V+ KID +++ + Y E+ P S+ G+ L + Sbjct: 108 LRRTKKSVILVVNKIDH---------IKQQDNVYDFYNLGFYEIFPISASNSMGLGDLLE 158 Query: 205 AIL 207 A++ Sbjct: 159 AVV 161 Score = 38.1 bits (87), Expect = 0.85, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 13/138 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G+ NVGKSSLIN L+N + + T A ++ + N K N +D Sbjct: 178 KVCLIGKPNVGKSSLINNLLNEERMIVTDIAGTTRDAIDSKI-----NYKGN--EYIFID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G + V+ + +VR LS +RS + CV L+ID GV + D + + + Sbjct: 231 TAGLRKRKKIDTEVERYS--VVRTLSAIDRSDI-CV-LMIDATEGVSEQDTKILGYAHDQ 286 Query: 149 AVSYQIVLTKIDKLSPTT 166 + I++ K D + T Sbjct: 287 GKAMIILVNKWDLVEKQT 304 >gi|302380361|ref|ZP_07268831.1| ribosome-associated GTPase EngA [Finegoldia magna ACS-171-V-Col3] gi|303233791|ref|ZP_07320445.1| ribosome-associated GTPase EngA [Finegoldia magna BVS033A4] gi|302311851|gb|EFK93862.1| ribosome-associated GTPase EngA [Finegoldia magna ACS-171-V-Col3] gi|302495225|gb|EFL54977.1| ribosome-associated GTPase EngA [Finegoldia magna BVS033A4] Length = 438 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 30/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N L+ +K +A T + PG T+ ++ ++ N +V Sbjct: 4 PVVAIVGRANVGKSTLFNKLI-KKRIAITQDDPGVTRD-RLYMEAEWQN-----KYFTVV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G PK N +I + + +++ L + ++D + G+ ID +V Sbjct: 57 DTGGL----EPKSN-----EIITKNIKKQTELAIETADVILFMVDGKQGITPIDMEVADM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + S +V+ KID +++ + Y E+ P S+ G+ L + Sbjct: 108 LRRTKKSVILVVNKIDH---------IKQQDNVYDFYNLGFYEIFPISASNSMGLGDLLE 158 Query: 205 AIL 207 A++ Sbjct: 159 AVV 161 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 13/138 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G+ NVGKSSLIN L+N + + T A ++ + N K N +D Sbjct: 178 KVCLIGKPNVGKSSLINNLLNEERMIVTDIAGTTRDAIDSKI-----NYKGN--EYVFID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G + V+ + +VR LS +RS + CV L+ID GV + D + + + Sbjct: 231 TAGLRKRKKIDTEVERYS--VVRTLSAIDRSDI-CV-LMIDATEGVSEQDTKILGYAHDQ 286 Query: 149 AVSYQIVLTKIDKLSPTT 166 + I++ K D + T Sbjct: 287 GKAMIILVNKWDLVEKQT 304 >gi|212550485|ref|YP_002308802.1| GTP-binding protein EngA [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|229710725|sp|B6YQB9|DER_AZOPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|212548723|dbj|BAG83391.1| GTP-binding protein EngA [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 437 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 11/137 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVN-RKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P+ P IA G+ NVGKSSLIN L N +N+ +N G T+ + + D LK Sbjct: 171 PEITIPAIAIVGKPNVGKSSLINALTNEERNIV--TNIAGTTRD-SIYTLYDKFGLK--- 224 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD G + ++N + + I+R + + LLID + D ++FS Sbjct: 225 --FYLVDTAGICKKKKVEENSEYYS--IIRAIRSIESSDICILLIDATQCIMAQDINIFS 280 Query: 144 FLDKKAVSYQIVLTKID 160 + K IV+ K D Sbjct: 281 IIQKNEKGLIIVVNKWD 297 >gi|160886572|ref|ZP_02067575.1| hypothetical protein BACOVA_04583 [Bacteroides ovatus ATCC 8483] gi|156108457|gb|EDO10202.1| hypothetical protein BACOVA_04583 [Bacteroides ovatus ATCC 8483] Length = 396 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 84/190 (44%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A IA GR N GKSSLIN L ++ A S+ PG T L V K ++ P Sbjct: 7 PNASRLHIALFGRRNSGKSSLINALTG-QDTALVSDTPGTTTDL---VSKAM-EIQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I R L LL C +++ Sbjct: 62 CL-FIDTPGF----------DDEGELGELRISRTLKAIEKTDIALLL--CGDTTFSHEKE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L +K + VL KID + + T + +Y IR P +I S+ ++ GIE Sbjct: 109 MLTLLKEKNIPVIPVLNKIDIRENSDSLATYIEEEYKIR------PLLI--SAKEKTGIE 160 Query: 201 VLRKAILETI 210 +R+AILE + Sbjct: 161 QIRQAILEKL 170 >gi|315186467|gb|EFU20227.1| ribosome-associated GTPase EngA [Spirochaeta thermophila DSM 6578] Length = 450 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 14/188 (7%) Query: 18 VPEIGL-LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 VPE G P A ++A G+ N GKS+L+N L+ + A S+APG T+ L Sbjct: 179 VPEGGGDAPSAPEIDVAILGKPNTGKSTLLNTLLGEER-ALVSDAPGTTRDLLE------ 231 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + +VD G + +++ + + R L V+LLID + G+ + Sbjct: 232 GRFQYRGRWFRIVDTAGIRRRSRIEDDLEFYS--VRRSLKVIEEAHVVFLLIDAQEGLTE 289 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSV 194 D+ + + ++ +VL K D L+P Q + K IR + + ++ S+ Sbjct: 290 QDKKIAAVAQRRGRGVILVLNKWDALTPVPNQ--FQAMKARIRFFFPHMDYAPIVKISAR 347 Query: 195 KRKGIEVL 202 + +GI+ L Sbjct: 348 RGEGIDKL 355 >gi|312135360|ref|YP_004002698.1| small gtp-binding protein [Caldicellulosiruptor owensensis OL] gi|311775411|gb|ADQ04898.1| small GTP-binding protein [Caldicellulosiruptor owensensis OL] Length = 609 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 37/180 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G NVGKS + N L R SN PG T +N+ K++ +VD Sbjct: 21 IALVGNPNVGKSVIFNKLTGRY--VEVSNYPGTTVDVNYGFYKNY----------VIVDT 68 Query: 92 PG-YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG YG + + + + + L+ + + V D H +D+D+F L ++ + Sbjct: 69 PGVYGISSFNDEEIVTRDIV----LNTQKIINVV----DSVH----LDRDLF--LTQQLI 114 Query: 151 SYQ----IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 YQ +VL +D++ + +EK K EVI TS+ + +GI+ L++AI Sbjct: 115 DYQKEVIVVLNMVDEVEKNNIKIDIEKLK------ENLGVEVIATSASRGEGIDKLKEAI 168 >gi|78044593|ref|YP_358878.1| tRNA modification GTPase TrmE [Carboxydothermus hydrogenoformans Z-2901] gi|123577255|sp|Q3AG56|MNME_CARHZ RecName: Full=tRNA modification GTPase mnmE gi|77996708|gb|ABB15607.1| tRNA modification GTPase TrmE [Carboxydothermus hydrogenoformans Z-2901] Length = 461 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 24/178 (13%) Query: 34 FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 +G+ NVGKSSL+N L+ RK A ++ PG T+ V +D+ NLK +P + +VD G Sbjct: 227 IAGKPNVGKSSLLNALL-RKKRAIVTDIPGTTRD----VIEDYLNLK-GIP-VKIVDTAG 279 Query: 94 YGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 R + V+ G R YL++ ++D G+ + D+ + S ++K Sbjct: 280 I---RETEDLVEKLGVEKTREYLNQAD---VTLFVVDVSIGIDEDDEKILSLINKD--KS 331 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID L E K I+N+ +P S+ +G+E+L + E + Sbjct: 332 LLVINKIDLLQGKVNFEQY-AVKTGIKNF-------VPFSARNFEGLEILENKLYEIL 381 >gi|237723395|ref|ZP_04553876.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229447917|gb|EEO53708.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 396 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A IAF GR N GKSSLIN L ++ A S+ PG T L V K ++ P Sbjct: 7 PSASRLHIAFFGRRNSGKSSLINALTG-QDTALVSDTPGTTTDL---VSKAM-EIQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I R L LL C +++ Sbjct: 62 CL-FIDTPGF----------DDEGELGELRISRTLKAIEKTDIALLL--CGDTTFSYEKE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L +K + VL KID +E + I P +I S+ ++ GIE Sbjct: 109 MLALLKEKNIPVIPVLNKID------IRENSDSLATYIEEECKIRPLLI--SAKEKTGIE 160 Query: 201 VLRKAILETI 210 +R+AILE + Sbjct: 161 QIRQAILEKL 170 >gi|124008576|ref|ZP_01693268.1| GTP-binding protein EngA [Microscilla marina ATCC 23134] gi|123985950|gb|EAY25807.1| GTP-binding protein EngA [Microscilla marina ATCC 23134] Length = 436 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 14/185 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P AG P+IA GR N GKSSL+N+L ++ T A +N ++ K Sbjct: 172 PYAGIPKIAIVGRPNAGKSSLVNVLTGKERSIVTDIAGTTRDSVN-------THYKAFGK 224 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L D G K N++ + + R L +++D G++ D ++ Sbjct: 225 NFILTDTAGLRRKSRVKDNIEFYSTM--RALRSLEASDICIVMVDATRGIEGQDVNIIGL 282 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGI-EV 201 DK I++ K D + T +T EK + I P + +I S ++++ I +V Sbjct: 283 ADKNGKGIVIMVNKWDLIEKDT--KTAEKFRKDIAEKIAPMTYIPIIFGSVLEKQRIFQV 340 Query: 202 LRKAI 206 + KAI Sbjct: 341 VEKAI 345 >gi|15894928|ref|NP_348277.1| GTPase [Clostridium acetobutylicum ATCC 824] gi|15024610|gb|AAK79617.1|AE007674_6 Predicted GTPase with uncharacterized domain, ortholog of T.maritima (4980952) [Clostridium acetobutylicum ATCC 824] gi|325509065|gb|ADZ20701.1| GTPase with uncharacterized domain [Clostridium acetobutylicum EA 2018] Length = 411 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 27/190 (14%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E+ PK IA G++NVGKSS+IN L +++ +A SN G T V K L Sbjct: 3 ELNSTPKGERLHIALFGKTNVGKSSVINALTSQE-IALVSNVKGTTTDP---VYKAMELL 58 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIV-RYLSERSTLRCVYLLIDCRHGVKQID 138 L + L+D G ++ G L + L S L+ D G+ + D Sbjct: 59 P--LGPVMLIDTAGL-------DDISDLGELRRGKTLEVLSKTDVAILVFDVESGITEYD 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTSSVKRK 197 ++++S L +K + VL KID K Y + +Y + ++P S++ K Sbjct: 110 KNIYSLLLEKKIPLIGVLNKID------------KKDYKLEDYTSQFKIPIVPISALNNK 157 Query: 198 GIEVLRKAIL 207 GI L+ ++ Sbjct: 158 GINNLKDELI 167 >gi|291522204|emb|CBK80497.1| ribosome-associated GTPase EngA [Coprococcus catus GD/7] Length = 441 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G+ NVGKSSLIN L +N SN G T+ V +K+N + Sbjct: 178 PHVAIVGKPNVGKSSLINKLTG-ENRVIVSNIAGTTRDAIDTV------IKHNGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + I+R +S V L+ID + GV + D + ++ Sbjct: 231 DTAGLRRKSKIKEDIERYS--IIRTVSAVERANVVVLMIDAKEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLS 163 I + K D + Sbjct: 289 KGMIIAVNKWDAIE 302 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 21/144 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ ++ + PG T+ + ++ N + ++ Sbjct: 4 PIVAIIGRPNVGKSTLFNALAGQQ-ISIVKDTPGVTRD-RIYADVNWLNTQ-----FTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P N LI++ + E++ T + L D R GV D V + Sbjct: 57 DTGGI----EPSTN-----DLILKSMREQAEIAIETADVIIFLTDVRQGVVDADFQVANM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 + + +V+ K+D A Sbjct: 108 IRRSGKPVVLVVNKVDNFKTMMAD 131 >gi|170767411|ref|ZP_02901864.1| GTP-binding protein EngA [Escherichia albertii TW07627] gi|170123745|gb|EDS92676.1| GTP-binding protein EngA [Escherichia albertii TW07627] Length = 499 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 207 PQSLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MERDGR 259 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 260 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 316 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 317 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 349 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEEGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 RVL 168 >gi|163782078|ref|ZP_02177077.1| GTP-binding protein Era [Hydrogenivirga sp. 128-5-R1-1] gi|159882610|gb|EDP76115.1| GTP-binding protein Era [Hydrogenivirga sp. 128-5-R1-1] Length = 304 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 31/187 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G+ NVGKS+L+N ++ RK ++ + PG T + K+ S + +D Sbjct: 6 VTIVGKPNVGKSTLLNNILGRK-VSIVTPKPG-TTRIRVLGVKNISGEAQ----IIFLDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFS----- 143 PG K D G +++ R +L + +ID G ++ D++VF Sbjct: 60 PGIYQP----KGADVLGKSMLQM--ARQSLEDADVILFMIDAEEGWRKRDEEVFQSYVKP 113 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP---EVIPTSSVKRKGIE 200 + ++K V +V+ KIDKL A+ L LI HP E++PTS++K +E Sbjct: 114 YAEQKPVI--LVVNKIDKLG--AAKNVLP----LIEEIHKKHPEFKEIVPTSALKGANLE 165 Query: 201 VLRKAIL 207 L K +L Sbjct: 166 ELEKTLL 172 >gi|188997363|ref|YP_001931614.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1] gi|229807528|sp|B2V5W6|DER_SULSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|188932430|gb|ACD67060.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 445 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 17/184 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 ++A G+ N GKSSLIN L+N + + S PG T+ ++ KD + Sbjct: 183 KVAIVGKPNAGKSSLINALLNEERVL-VSEIPGTTRDTVDILYEKD---------GQKFL 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 + G + K + + R + V L+ID G + D + + ++ Sbjct: 233 FLDTAGMRKKSKVDFGLEFFSVGRTIEAIEKADVVVLVIDANQGATEQDTKIAGLIQRRY 292 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 IV+ KID T ++TLEK + +R Y ++ ++ TS+ ++G++ L + I+ Sbjct: 293 KPAVIVINKID----TVDKKTLEKVEKQVRERLYFISYAPIVFTSAKTKEGLDELLEKIV 348 Query: 208 ETIN 211 N Sbjct: 349 YVYN 352 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKSSL N ++ ++ A + PG T+ ++ +K +VD Sbjct: 4 VAIVGIPNVGKSSLFNRIIGQRK-AIVEDIPGVTRD-RIVSTAEWRGVK-----FEVVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL-LIDCRHGVKQIDQDVFSFLDKKAV 150 GY + D + I + + + L +++ ++D + G+ +D+++ + L + Sbjct: 57 GGYITG-----DEDKFAPYIRKQVEKELELSDLFIFVVDGKQGLTPLDKEIANILHRTEK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KID P EK K Y +IP S++++ G+ L ++E I Sbjct: 112 PVIVAVNKID--DP-------EKEKLAYEFYELGFENIIPISAIQKLGLAELLDKVVEYI 162 >gi|289423889|ref|ZP_06425682.1| GTP-binding protein Era [Peptostreptococcus anaerobius 653-L] gi|289155666|gb|EFD04338.1| GTP-binding protein Era [Peptostreptococcus anaerobius 653-L] Length = 299 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 22/183 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N +V K +A S+ P T++ V D + +D Sbjct: 8 VSIVGRPNVGKSTLMNDMVGEK-IAIMSDKPQTTRNTIQAVYTDEE------AQIVFMDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G ++V+ S+ + + ++D + + D + L K + Sbjct: 61 PG---IHKPK---NKLGEMMVKSASDAFKNVDSIIFVVDDSRTIGKGDSLIIENLKKTST 114 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ KIDK+ ++ E +IR Y E+IPTS++K I+ L K I Sbjct: 115 PVFLVINKIDKID--NKEDLFE----MIRMYDDLNVFKEIIPTSALKGSNIDSLIKVIKR 168 Query: 209 TIN 211 +N Sbjct: 169 NLN 171 >gi|262118592|pdb|3GEH|A Chain A, Crystal Structure Of Mnme From Nostoc In Complex With Gdp, Folinic Acid And Zn Length = 462 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 23/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N ++ + A ++ PG T+ + + + +P L D Sbjct: 227 VAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-DT 279 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G + R +T V L ID G DQ+++ + + + Sbjct: 280 AGI---RETSDQVEKIG--VERSRQAANTADLVLLTIDAATGWTTGDQEIYEQVKHRPLI 334 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID +EK YP +++ T++ +++GI+ L AILE + Sbjct: 335 --LVMNKID---------LVEKQLITSLEYPENITQIVHTAAAQKQGIDSLETAILEIVQ 383 >gi|260655278|ref|ZP_05860766.1| ribosome-associated GTPase EngA [Jonquetella anthropi E3_33 E1] gi|260629726|gb|EEX47920.1| ribosome-associated GTPase EngA [Jonquetella anthropi E3_33 E1] Length = 440 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 20/175 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKSSL N LV + A + PG T+ + F ++ + LVD Sbjct: 4 VSIVGRPNVGKSSLFNRLVGSRR-AIVDDQPGVTRD------RLFGRVEWGDRSFYLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + S G I + + E V ++D GV +DQDV L K + Sbjct: 57 GGL-LLRDDDPIMRSMRGQIQQAIEESD---AVLFVVDGPSGVTWMDQDVADVLRKASSR 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+D + + Y +VI S++ +GI+ L++A+ Sbjct: 113 VIVVINKLDD---------WKHDDLAMEAYSLGFDKVIGVSALHDRGIDELKEAV 158 >gi|317969119|ref|ZP_07970509.1| GTP-binding protein Era-like protein [Synechococcus sp. CB0205] Length = 327 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 21/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV K +A TS T++ + + L + LVD Sbjct: 39 VALVGRPNVGKSTLMNQLVGEK-VAITSPVAQTTRN------RLRAILTTPTAQLVLVDT 91 Query: 92 PGYG--YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG + ++ V + G I + V LL+D + D + L++ Sbjct: 92 PGIHKPHHLLGERLVQTARGAI-------GEVDQVLLLVDGSQAAGRGDGFIVELLERIK 144 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V Q+ L K D + P A E + L+ +P + P S++ +G E L A+ Sbjct: 145 VPVQVALNKSDLVDPAQAAELEASYRELVPGWP-----LHPVSALNGEGTEALVSAL 196 >gi|242278504|ref|YP_002990633.1| GTP-binding protein EngA [Desulfovibrio salexigens DSM 2638] gi|259645870|sp|C6C0G0|DER_DESAD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|242121398|gb|ACS79094.1| small GTP-binding protein [Desulfovibrio salexigens DSM 2638] Length = 450 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 10/132 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L+ RK A T + PG T+ + ++ N AL+ Sbjct: 3 PTIALIGRPNVGKSTLFNRLL-RKKRAITHDMPGITR------DRIYAEGNYNGVHYALI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G N + + G I E + + L++D R G+ Q+D+ V +++ + Sbjct: 56 DTGGL--VMESDNNSEEFQGDIFEQAREAIEEAQALILVVDGRTGITQLDEQVAAYIRQS 113 Query: 149 AVSYQIVLTKID 160 +++ K+D Sbjct: 114 NKPILLLVNKVD 125 Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 17/172 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR N GKSS++N L + + S+ G T+ D + ++ VD Sbjct: 184 KIAMLGRPNAGKSSMVNALTGEERVI-VSDVAGTTRD-----SVDVT-FESGGKIYTFVD 236 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + +VR L + +++D G+ + D+ + +L ++AV Sbjct: 237 TAGVRRRTNITDTIERFS--VVRALRSSTKADITVMVVDALAGITKQDKRLLEYLLREAV 294 Query: 151 SYQIVLTKIDKLSPTT---AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + I + KID +S + +E E+ + + P V+ TS + + G+ Sbjct: 295 PFIIAVNKIDLVSKSERNLLREGFERALRMAHHVP-----VVYTSCISKSGL 341 >gi|253988871|ref|YP_003040227.1| GTP-binding protein EngA [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780321|emb|CAQ83482.1| gtp-binding protein enga (double era-like domain protein) [Photorhabdus asymbiotica] Length = 499 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 208 PSTLPLKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 260 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 261 EYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 318 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D +S ++ E Y + A I S++ G+ L Sbjct: 319 ILNSGRSLVIAVNKWDGMSQEDKEQVKEMLDYRLGFVDFARVHFI--SALHGSGVGNLFD 376 Query: 205 AILETIN 211 +ILE + Sbjct: 377 SILEAYD 383 >gi|17232169|ref|NP_488717.1| tRNA modification GTPase TrmE [Nostoc sp. PCC 7120] gi|21363007|sp|Q8YN91|MNME_ANASP RecName: Full=tRNA modification GTPase mnmE gi|17133814|dbj|BAB76376.1| thiophen / furan oxidation protein [Nostoc sp. PCC 7120] Length = 459 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 23/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N ++ + A ++ PG T+ + + + +P L D Sbjct: 224 VAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-DT 276 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G + R +T V L ID G DQ+++ + + + Sbjct: 277 AGI---RETSDQVEKIG--VERSRQAANTADLVLLTIDAATGWTTGDQEIYEQVKHRPLI 331 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID +EK YP +++ T++ +++GI+ L AILE + Sbjct: 332 --LVMNKID---------LVEKQLITSLEYPENITQIVHTAAAQKQGIDSLETAILEIVQ 380 >gi|315453296|ref|YP_004073566.1| GTP-binding protein ERA-like protein [Helicobacter felis ATCC 49179] gi|315132348|emb|CBY82976.1| GTP-binding protein ERA homolog [Helicobacter felis ATCC 49179] Length = 297 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 20/189 (10%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNN 82 + KAG IA GR N GKS+L+N LVN ++LA TS+ T+ L VP +++ + N Sbjct: 1 MSKAGF--IALIGRPNAGKSTLLNALVN-EHLALTSHKAHATRKALKAIVP--YTDSQGN 55 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-VYLLIDCRHGVKQIDQDV 141 M VD PG +PKK ++ ++ S R+ C + L + H + ++ Sbjct: 56 ACQMVFVDTPGIA---SPKKLLEQ----AMQEESMRALQDCDLVLFLASVHDDLRDYENF 108 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 SF K + + L KID L T A + Y + Y ++P S+ K K I++ Sbjct: 109 LSFASTK--PHILALNKIDTL--THADLLAKIAPY--QAYGDKFHALVPLSASKYKNIDI 162 Query: 202 LRKAILETI 210 L + E + Sbjct: 163 LLANVAELL 171 >gi|157869716|ref|XP_001683409.1| hypothetical protein [Leishmania major strain Friedlin] gi|68126474|emb|CAJ04410.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 425 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 10/67 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GR++ GKSSL+N +VN + + G T L F+ N+ N L LV Sbjct: 172 PEVAFIGRTSSGKSSLVNAIVN-AMITPYGHLRGTTNSLRFY------NVANCL---TLV 221 Query: 90 DMPGYGY 96 D PGYGY Sbjct: 222 DCPGYGY 228 >gi|311278558|ref|YP_003940789.1| ribosome-associated GTPase EngA [Enterobacter cloacae SCF1] gi|308747753|gb|ADO47505.1| ribosome-associated GTPase EngA [Enterobacter cloacae SCF1] Length = 492 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 9/152 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 200 PQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MERDER 252 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 253 EYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 310 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + S IV+ K D LS ++ E Y Sbjct: 311 ILNSGRSLVIVVNKWDGLSQEVKEQVKETLDY 342 >gi|148981906|ref|ZP_01816564.1| GTP-binding protein Era [Vibrionales bacterium SWAT-3] gi|145960707|gb|EDK26049.1| GTP-binding protein Era [Vibrionales bacterium SWAT-3] Length = 323 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 26/184 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKS+L+N ++ +K ++ TS P T+H + D+ + V Sbjct: 32 IAIVGRPNVGKSTLLNHILGQK-ISITSRKPQTTRHRIMGVETEGDYQAI--------FV 82 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG N L+ R S S + V+ L+D H + D+ V + L K Sbjct: 83 DTPGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTED-DEMVLNKLKKT 136 Query: 149 AVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D + T Q +E +K + +V+P S+ + K I+VLRK + Sbjct: 137 DFPVVLCINKVDNVQDRTNVMQHMMEVSKKM------DFIDVVPISAKQGKNIDVLRKHV 190 Query: 207 LETI 210 E + Sbjct: 191 REHL 194 >gi|153005016|ref|YP_001379341.1| GTP-binding protein EngA [Anaeromyxobacter sp. Fw109-5] gi|152028589|gb|ABS26357.1| small GTP-binding protein [Anaeromyxobacter sp. Fw109-5] Length = 471 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L R+ A + PG T+ N+ DFS + A+++VD Sbjct: 13 VALVGRPNVGKSTLFNRLAGRRA-AIVQDVPGVTRDRNY---ADFSF---DGRALSVVDT 65 Query: 92 PGYGYARAPK--KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G+ + V L V + V L++D R G+ +D+ V L + Sbjct: 66 GGFEPESRDRLMSQVRQQAQLAVEEAA------AVVLVVDGREGLTAVDRSVADLLRRAG 119 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D TA+ E+ L Y EV S+ +G+ L +AI+E Sbjct: 120 KPLFVAVNKVD-----TAR--TEEEIPLAEFYQLGFGEVHSVSAEHGRGVGDLVEAIVEK 172 Query: 210 IN 211 + Sbjct: 173 LQ 174 >gi|225849583|ref|YP_002729817.1| GTP-binding protein EngA [Persephonella marina EX-H1] gi|254783162|sp|C0QT02|DER_PERMH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|225645742|gb|ACO03928.1| ribosome-associated GTPase EngA [Persephonella marina EX-H1] Length = 447 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 17/185 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMAL 88 ++A G+ N GKSSL+N ++ + A S PG T+ + F KD L Sbjct: 184 KVAIVGKPNAGKSSLLNAILGEER-AVVSEIPGTTRDVVDTLFEWKDQKFL--------F 234 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ + I R L + +ID + G + D + + K Sbjct: 235 LDTAGLRKKSKVDYGIEFFS--IGRTLDAIKKADVIVHVIDAQQGATEQDTKIAHLIQKY 292 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAI 206 IV+ KID + P + E L + K +R Y + ++ TS+ RKGI+ L K I Sbjct: 293 TKPAVIVINKIDTVPPKS--EVLNRIKNQVRERLYFIPYAPIVMTSAKNRKGIKQLLKEI 350 Query: 207 LETIN 211 + N Sbjct: 351 TDVYN 355 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N ++ ++ A + PG T+ + S + +VD Sbjct: 4 VAIVGRPNVGKSSLFNRIIGKRK-AIVEDIPGVTRD------RIVSTAEWRGVTFEVVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL-IDCRHGVKQIDQDVFSFLDKKAV 150 GY + + D++ I + + + L ++L +D + G+ D+++ L + Sbjct: 57 GGY-----IESDKDTFAPYIRKQIEKELELSDAFILVVDGKEGLTPADKEIARILHRTDK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KID +P E K + Y +V P SS+++ G+ L A+++ I Sbjct: 112 PVYVAVNKID--NP-------EMEKAIYEFYELGFEKVFPVSSIQKYGVADLLDAVVQDI 162 >gi|114320504|ref|YP_742187.1| GTP-binding protein Era [Alkalilimnicola ehrlichii MLHE-1] gi|114226898|gb|ABI56697.1| GTP-binding protein Era [Alkalilimnicola ehrlichii MLHE-1] Length = 315 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 26/184 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K T Q + +D + + VD Sbjct: 27 VALVGRPNVGKSTLLNQLLGQKISIVTRKPQTTRQRILGVCHRDGAQI-------VYVDT 79 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERST-----LRCVYLLIDCRHGVKQIDQDVFSFLD 146 PG R N RYL+ + + V L+D H K D+ V L Sbjct: 80 PGLHQRRDKALN---------RYLNRTAANALADVDLVVFLVDRLH-FKPEDEAVLERLK 129 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ V + + K+D+L + L ++L +P EV+P S++K + + L +AI Sbjct: 130 RRDVPVILAINKVDRLRDKA--QLLPHIQWLSEQHPFV--EVVPLSALKGENLAPLEEAI 185 Query: 207 LETI 210 L + Sbjct: 186 LRQL 189 >gi|238897953|ref|YP_002923633.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259645880|sp|C4K4J2|DER_HAMD5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|229465711|gb|ACQ67485.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 496 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 11/184 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L+N ++ + + + PG T+ + ++P ++NN Sbjct: 205 PESLPIKLAIVGRPNVGKSTLVNHILAQDRML-VYDIPGTTRD-SIYIPL----IRNNRE 258 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +D G + K+ V+ + +++ L V L+ID GV D + SF Sbjct: 259 YI-FIDTAGVRKSAKIKEKVERFS--VIKTLKAIENANVVLLVIDANEGVSDQDLSLLSF 315 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D +S ++ + A I S++ G+E L K Sbjct: 316 ILNSGRSLVITVNKWDAISSEKRKQIKNSLDLRLGFMDFARTHFI--SALHGSGVENLFK 373 Query: 205 AILE 208 +I E Sbjct: 374 SIKE 377 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 24/145 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+ N L N A ++ PG T+ + + ++N+ ++ Sbjct: 3 PIIALIGRPNVGKSTFFNRLTQTAN-ALVADFPGLTRDRQY----GHAEIENH--KFIII 55 Query: 90 DMPGYGYARAPKKNVDSWGGL--IVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 D G ++ G+ I ++++ +S L V ++D R G+ D ++ Sbjct: 56 DTGG----------INGIEGIENIQKHMTHQSFLAIEEADVVLFILDARAGLLPADLEIA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTA 167 L K+ + +V KID ++ TA Sbjct: 106 KHLRKRKKATFLVANKIDGMNSDTA 130 >gi|217967546|ref|YP_002353052.1| small GTP-binding protein [Dictyoglomus turgidum DSM 6724] gi|217336645|gb|ACK42438.1| small GTP-binding protein [Dictyoglomus turgidum DSM 6724] Length = 436 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 11/144 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++AF GR N GKSSL+N L+ R + + S PG T+ + DF+ K +VD Sbjct: 179 KLAFVGRPNSGKSSLLNALIGR-DRSIVSEIPGTTRDAVDLI-WDFNGKK-----YIIVD 231 Query: 91 MPGYGYARAPKKNVDSWGGLIV-RYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG R P K + L V + L + ++ID G+++ ++ + +++ K Sbjct: 232 TPGL---RRPAKVEEGLEELSVQKTLQTIRRIDIAIMVIDLSVGIREQEKRILHYIEDKG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEK 173 S IV K D + + EK Sbjct: 289 KSCLIVFNKTDLIPSLKERREFEK 312 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 30/154 (19%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ----HLNFFVPKDFSNLKN 81 K G P ++ GR NVGKS L N +V + A ++ PG T+ HL K F Sbjct: 2 KKGVPVVSIVGRPNVGKSVLFNRIVGEEK-AIVADEPGVTRDPLVHLCEHEGKYF----- 55 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR-CVYLLIDCRHGVKQIDQD 140 LVD G+G D LI + E + + ++D R + +D + Sbjct: 56 -----YLVDSAGWGLT-------DDLSELIQEKIQEVINISDLILFVVDGRSELTALDHE 103 Query: 141 VFSFLDKKAVSYQIVLTK----IDK---LSPTTA 167 L K +V+ K ID+ L+P TA Sbjct: 104 FVDILRKSGKRVILVVNKMEGRIDREEYLAPFTA 137 >gi|148244712|ref|YP_001219406.1| GTP-binding protein Era [Candidatus Vesicomyosocius okutanii HA] gi|146326539|dbj|BAF61682.1| GTP-binding protein Era [Candidatus Vesicomyosocius okutanii HA] Length = 316 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+LIN L+ RK L+ TS+ P T+H + + +N M VD Sbjct: 30 IGVVGRPNVGKSTLINELIGRK-LSITSHRPQTTRHRIHAI-----DTTDNY-QMVFVDT 82 Query: 92 PG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG G +A ++ L + + + LI+ K+ D V + + Sbjct: 83 PGIHMGNYKAINSYMNRVASLAI------MDVDVILWLIEVGKWTKE-DLRVLEHITQID 135 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + KIDKL + QE L + + Y PT ++ P S+ K+ I VLR+ +L+ Sbjct: 136 VPVILCINKIDKLK--SPQEVLPFLNKIFQKYQPT---DLFPLSAFKKNDICVLRELVLQ 190 >gi|330443932|ref|YP_004376918.1| GTP-binding protein engA [Chlamydophila pecorum E58] gi|328807042|gb|AEB41215.1| GTP-binding protein engA [Chlamydophila pecorum E58] Length = 483 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 29/212 (13%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F ++ F P++ L P +IA GR NVGKSS+IN L+N + T N PG T Sbjct: 197 VFDENHESFFVEDPQLPPLETNQPLKIALIGRPNVGKSSIINGLLNEERCI-TDNIPGTT 255 Query: 66 QHLN---FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 + N + +D S L +D G ++ K +V+ W I +E++ R Sbjct: 256 RD-NVDILYTKEDRSYL--------FIDTAGLRKMKSVKNSVE-W---ISTSRTEKAISR 302 Query: 123 C--VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ----ETLEKTKY 176 L++D G+ D+ + S + K+ + +++ K D + + + L Y Sbjct: 303 ADICLLVVDATQGLSSYDKRILSLISKEKKPHILLVNKWDLMHSIRMEHYCRDVLATDPY 362 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 L ++ S++K++ + + +AI E Sbjct: 363 L------GQARILCISALKKRNLSQIFRAIDE 388 >gi|307128641|ref|YP_003880671.1| GTP-binding protein EngA [Candidatus Sulcia muelleri CARI] gi|306483103|gb|ADM89973.1| GTP-binding protein EngA [Candidatus Sulcia muelleri CARI] Length = 436 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 10/175 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K P IA GR NVGKS+LIN L+N KN +N G T+ K F Sbjct: 172 KKKIPRIAIVGRPNVGKSTLINTLLN-KNQNIVTNISGTTRDSIDVFYKKFG------IE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G + K+N++ + ++R + L+ID + G + D ++F + Sbjct: 225 CILVDTAGIRKKKKIKENIEFYS--VMRAIKSIQNSDVCLLIIDIKSGFESQDMNIFKII 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGI 199 + I++ K D + ++ K + + P + TSS +K I Sbjct: 283 ENNNKGIVILINKWDFIKKNEKNLSINYEKEIKKKITPFNDVPIFFTSSFTKKNI 337 >gi|227112682|ref|ZP_03826338.1| GTP-binding protein EngA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 495 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 13/151 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P + + Sbjct: 203 PEDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRD-SIYIP-----MVRDER 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 256 EYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + S IV+ K D LS QE E+ K Sbjct: 314 ILNSGRSLVIVVNKWDGLS----QEVREQVK 340 >gi|146280557|ref|YP_001170710.1| selenocysteine-specific elongation factor [Pseudomonas stutzeri A1501] gi|145568762|gb|ABP77868.1| selenocysteine-specific elongation factor [Pseudomonas stutzeri A1501] Length = 638 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 115 LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV-LTKIDKLSPTTAQETLEK 173 L+ S + CV L++ GV ++ + ++ + +V LTKID++ P E ++ Sbjct: 69 LAGASGIDCVLLVVAADDGVMPQTREHLAIVELLGIRRALVALTKIDRVEPARIAEVEQQ 128 Query: 174 TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + L+ P A + P SS++ GI+ LR A+++ Sbjct: 129 IENLLATGPLAGAPIFPVSSIRGDGIDALRAALID 163 >gi|298528797|ref|ZP_07016201.1| ribosome-associated GTPase EngA [Desulfonatronospira thiodismutans ASO3-1] gi|298512449|gb|EFI36351.1| ribosome-associated GTPase EngA [Desulfonatronospira thiodismutans ASO3-1] Length = 442 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 22/185 (11%) Query: 24 LPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 LP PE ++ GR NVGKSSL+N L+ ++ + +S A G T+ + Sbjct: 170 LPAHEEPEDQAAHLRLSLLGRPNVGKSSLVNTLLGQERVLVSSRA-GTTRDCVDVI---- 224 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 L+ +D G +++ + L +RS + L++D G+ Sbjct: 225 --LEKGDKRYVFIDTAGVRRKTTISDDLERFSALRAIRSCQRSDV--ALLVLDALSGMVA 280 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSV 194 D+ + SFL+++ + IV+ K+D++ ++ L K K ++ AH VI TS + Sbjct: 281 QDKKLLSFLEREKIPLVIVVNKVDQIP----RKDLGKLKRYFQDELAFCAHAPVIYTSCI 336 Query: 195 KRKGI 199 R G+ Sbjct: 337 TRAGL 341 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 11/131 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N L+ R+N A + PG T+ + ++ LV Sbjct: 10 PFVVIVGRPNVGKSTLFNRLL-RQNKAMVHDRPGVTRD------SLYGRVQGRTRDYTLV 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + + + VR + L + ++D GV +D+ + + L + Sbjct: 63 DTGGLVLEQGAQLEEEIYEQ--VREAMHSADL--ILFMVDGSAGVTALDEQLAAMLRQSR 118 Query: 150 VSYQIVLTKID 160 ++V+ K+D Sbjct: 119 RPVRLVVNKVD 129 >gi|322491950|emb|CBZ27223.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 425 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 10/67 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GR++ GKSSL+N +VN + + G T L F+ N+ N L LV Sbjct: 172 PEVAFIGRTSSGKSSLVNAIVN-AMVTPYGHLRGTTNSLRFY------NVANRL---MLV 221 Query: 90 DMPGYGY 96 D PGYGY Sbjct: 222 DCPGYGY 228 >gi|253689379|ref|YP_003018569.1| small GTP-binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259645883|sp|C6DBH0|DER_PECCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|251755957|gb|ACT14033.1| small GTP-binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 495 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 13/151 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P + + Sbjct: 203 PEDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRD-SIYIP-----MVRDER 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 256 EYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + S IV+ K D LS QE E+ K Sbjct: 314 ILNSGRSLVIVVNKWDGLS----QEVREQVK 340 >gi|254449216|ref|ZP_05062665.1| GTP-binding protein EngA [gamma proteobacterium HTCC5015] gi|198261193|gb|EDY85489.1| GTP-binding protein EngA [gamma proteobacterium HTCC5015] Length = 472 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 11/134 (8%) Query: 32 IAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 IA GR NVGKS+LIN IL + LA +APG T+ + FVP ++ L L+D Sbjct: 181 IAVVGRPNVGKSTLINRILGETRVLA--YDAPGTTRD-SIFVP-----FESELGRYTLID 232 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + +V+ L + V +ID R GV + D + + + Sbjct: 233 TAGVRKRGKIHETVEKFS--VVKALQAIAEAHVVLQVIDARRGVAEQDLTLLREVLHQGS 290 Query: 151 SYQIVLTKIDKLSP 164 + V+ K D LSP Sbjct: 291 ALVFVINKWDGLSP 304 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 21/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + N K A +V Sbjct: 3 PVIAIVGRPNVGKSTLFNCLTRTRD-ALVADMPGLTR------DRKYGNGKLGDRAYVVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + N+ + + E L ++D R G+ ID+++ + KK Sbjct: 56 DTGGLSTDQDEMDNL--MASQAQQAMDEADIL---LFMVDSREGINPIDENIAREIRKKG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K+D P + Y E + ++ +G+ L + + ET Sbjct: 111 KPVFLVANKMDGCDPDVIRADF---------YQLGLGEPLTIAASHNRGVHSLIETLFET 161 Query: 210 I 210 + Sbjct: 162 L 162 >gi|331673966|ref|ZP_08374729.1| ribosome-associated GTPase EngA [Escherichia coli TA280] gi|331069239|gb|EGI40631.1| ribosome-associated GTPase EngA [Escherichia coli TA280] Length = 503 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 211 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 263 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D Sbjct: 264 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSQLG 320 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 321 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 353 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 16 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 59 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 118 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 119 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 169 Query: 205 AIL 207 +L Sbjct: 170 HVL 172 >gi|212225100|ref|YP_002308336.1| GTP-binding protein [Thermococcus onnurineus NA1] gi|212010057|gb|ACJ17439.1| probable GTP-binding protein [Thermococcus onnurineus NA1] Length = 203 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 26/188 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L + R PG T+ V + N K +VDM Sbjct: 2 IIFVGRSNVGKSTLIFRLTGK--WVRRGKRPGVTRKP---VEVSWRNRK-------VVDM 49 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERS-TLRCVYLLIDC-----------RHGVKQID 138 PG+G+ PK+ + IV ++ + + L+ID + G ID Sbjct: 50 PGFGFMSGLPKEKQEKIKDEIVHFIENNADEIDLAILVIDGKSVLEIIERWEKRGEIPID 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F FL + + + + KIDK+ T K+ + Y + +P S+ K Sbjct: 110 VEFFQFLRELKIPTIVAVNKIDKVKNVQGTITRLAEKFGV-PYSEINEIFVPISAKFGKN 168 Query: 199 IEVLRKAI 206 ++ LR I Sbjct: 169 LDELRMLI 176 >gi|309803256|ref|ZP_07697353.1| ribosome biogenesis GTPase Era [Lactobacillus iners LactinV 11V1-d] gi|309807561|ref|ZP_07701513.1| ribosome biogenesis GTPase Era [Lactobacillus iners LactinV 01V1-a] gi|308164764|gb|EFO67014.1| ribosome biogenesis GTPase Era [Lactobacillus iners LactinV 11V1-d] gi|308169167|gb|EFO71233.1| ribosome biogenesis GTPase Era [Lactobacillus iners LactinV 01V1-a] Length = 300 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 18/177 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV K +A SN P T++ K N+ + +D Sbjct: 11 VALVGRPNVGKSTLLNYLVGEK-VAIMSNQPQTTRN------KISGIYTNDNEQIIFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK N+D + + S + + V ++D K D + L A Sbjct: 64 PG---IHKPKNNLDDF--MDKSSYSALNDVEAVLFMVDPEPAGKG-DMFIIDLLKNVACP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ KID + P ++ L++ E+IP S+ + I+ L K +++ Sbjct: 118 VFLIINKIDTVHPDKLLPIIDSYNKLVK-----FAEIIPISARQGNNIDDLIKTLVK 169 >gi|259500586|ref|ZP_05743488.1| GTP-binding protein Era [Lactobacillus iners DSM 13335] gi|302191277|ref|ZP_07267531.1| GTP-binding protein Era [Lactobacillus iners AB-1] gi|309805224|ref|ZP_07699276.1| ribosome biogenesis GTPase Era [Lactobacillus iners LactinV 09V1-c] gi|309810245|ref|ZP_07704090.1| ribosome biogenesis GTPase Era [Lactobacillus iners SPIN 2503V10-D] gi|312871783|ref|ZP_07731871.1| ribosome biogenesis GTPase Era [Lactobacillus iners LEAF 3008A-a] gi|312872928|ref|ZP_07732988.1| ribosome biogenesis GTPase Era [Lactobacillus iners LEAF 2062A-h1] gi|312874162|ref|ZP_07734196.1| ribosome biogenesis GTPase Era [Lactobacillus iners LEAF 2052A-d] gi|312875582|ref|ZP_07735583.1| ribosome biogenesis GTPase Era [Lactobacillus iners LEAF 2053A-b] gi|315653578|ref|ZP_07906498.1| GTP-binding protein Era [Lactobacillus iners ATCC 55195] gi|325912100|ref|ZP_08174498.1| ribosome biogenesis GTPase Era [Lactobacillus iners UPII 143-D] gi|325912581|ref|ZP_08174964.1| ribosome biogenesis GTPase Era [Lactobacillus iners UPII 60-B] gi|329920169|ref|ZP_08277000.1| ribosome biogenesis GTPase Era [Lactobacillus iners SPIN 1401G] gi|259167970|gb|EEW52465.1| GTP-binding protein Era [Lactobacillus iners DSM 13335] gi|308165458|gb|EFO67689.1| ribosome biogenesis GTPase Era [Lactobacillus iners LactinV 09V1-c] gi|308169517|gb|EFO71565.1| ribosome biogenesis GTPase Era [Lactobacillus iners SPIN 2503V10-D] gi|311088836|gb|EFQ47279.1| ribosome biogenesis GTPase Era [Lactobacillus iners LEAF 2053A-b] gi|311090232|gb|EFQ48642.1| ribosome biogenesis GTPase Era [Lactobacillus iners LEAF 2052A-d] gi|311091450|gb|EFQ49834.1| ribosome biogenesis GTPase Era [Lactobacillus iners LEAF 2062A-h1] gi|311092725|gb|EFQ51081.1| ribosome biogenesis GTPase Era [Lactobacillus iners LEAF 3008A-a] gi|315488940|gb|EFU78582.1| GTP-binding protein Era [Lactobacillus iners ATCC 55195] gi|325476050|gb|EGC79218.1| ribosome biogenesis GTPase Era [Lactobacillus iners UPII 143-D] gi|325478002|gb|EGC81131.1| ribosome biogenesis GTPase Era [Lactobacillus iners UPII 60-B] gi|328936623|gb|EGG33067.1| ribosome biogenesis GTPase Era [Lactobacillus iners SPIN 1401G] Length = 300 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 18/177 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV K +A SN P T++ K N+ + +D Sbjct: 11 VALVGRPNVGKSTLLNYLVGEK-VAIMSNQPQTTRN------KISGIYTNDNEQIIFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK N+D + + S + + V ++D K D + L A Sbjct: 64 PG---IHKPKNNLDDF--MDKSSYSALNDVEAVLFMVDPEPAGKG-DMFIIDLLKNVACP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ KID + P ++ L++ E+IP S+ + I+ L K +++ Sbjct: 118 VFLIINKIDTVHPDKLLPIIDSYNKLVK-----FAEIIPISARQGNNIDDLIKTLVK 169 >gi|169333658|ref|ZP_02860851.1| hypothetical protein ANASTE_00042 [Anaerofustis stercorihominis DSM 17244] gi|169259652|gb|EDS73618.1| hypothetical protein ANASTE_00042 [Anaerofustis stercorihominis DSM 17244] Length = 394 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 43/199 (21%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT-----QHLNFFVPKDFSNL 79 PK I GR N GKSS+IN + N+ NLA S+ G T + + F Sbjct: 7 PKGERIYIGIFGRRNAGKSSIINAITNQ-NLAIVSDVKGTTTDPVSKAMELF-------- 57 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVK 135 L + ++D PG +D G L I + + L++D +G+ Sbjct: 58 --PLGPVVIIDTPG----------LDDVGSLGEKRIEKAYQVLNKTDIALLILDAEYGLT 105 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLS-----------PTTAQETLEKTKYLI-RNYPT 183 +D+++ + +K + Y I++ K D LS T E +++ K LI + P Sbjct: 106 DVDKELLKLIKEKNIPYIILMNKSDILSDDKKNNEFIYVSTKTGENIKELKELIAKKAPK 165 Query: 184 AHPEVIPTSSVKRKGIEVL 202 + +VI S + KG +V+ Sbjct: 166 GNEKVI-VSDLINKGDKVI 183 >gi|21672838|ref|NP_660905.1| GTP-binding protein EngA [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|8134425|sp|O51881|DER_BUCAP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|2827027|gb|AAC38119.1| ORF453 hypothetical protein [Buchnera aphidicola] gi|21623492|gb|AAM68116.1| probable GPT-binding protein EngA [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 453 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 9/133 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA G+ NVGKS+LIN L+ +K + TSN G T VP +K N +D Sbjct: 189 KIACIGKPNVGKSTLINSLLMKKRMI-TSNKAGTTLD-TVLVP-----IKYNYKNYIFID 241 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ ++ + + E+S L L+ID + + + D + SF++K Sbjct: 242 TAGMSKKKSKTNKIEKFCKIKTLQTIEKSHL--TLLIIDAKDQISKQDLLLSSFIEKSGK 299 Query: 151 SYQIVLTKIDKLS 163 IV+ K D LS Sbjct: 300 PLIIVINKCDLLS 312 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 23/137 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I GR+NVGKS+L NIL +N A ++ PG T+ N+ + LK N + +V Sbjct: 3 PIIVLIGRTNVGKSTLFNILSKTRN-ALVADYPGLTRDRNY----GYCYLKEN-KKITIV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC------VYLLIDCRHGVKQIDQDVFS 143 D G + + S TL+ + L++ R GV + ++ Sbjct: 57 DTAGINFKSQK-----------IEKQSHEQTLKAIKECDGILFLVNARDGVMPEEYEISR 105 Query: 144 FLDKKAVSYQIVLTKID 160 + K +V+ KID Sbjct: 106 KIRKYEKKTILVINKID 122 >gi|332296610|ref|YP_004438533.1| ferrous iron transport protein B [Thermodesulfobium narugense DSM 14796] gi|332179713|gb|AEE15402.1| ferrous iron transport protein B [Thermodesulfobium narugense DSM 14796] Length = 720 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 25/183 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++AF G NVGKS+LIN L + NL + N PG T V K +N+ N +LVD Sbjct: 20 KVAFVGNPNVGKSALINAL-SGSNL-KVGNWPGVT------VEKKEANIIINNQMFSLVD 71 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SF-LDKK 148 +PG Y+ P S I R + + ++D Q+++ +F +F L + Sbjct: 72 LPG-AYSLNPF----SLEEKITRDFLIKERPDVIVNVVDSN----QLEKSLFLTFALSEF 122 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + I L D++ + ++K + ++ EV+PTS +K GI+ L+KAI + Sbjct: 123 EIPMVIALNFFDEMIKNKTEIDIKKLRDIL------SIEVVPTSGIKGIGIDELKKAIYK 176 Query: 209 TIN 211 +++ Sbjct: 177 SVS 179 >gi|227873162|ref|ZP_03991453.1| tRNA modification GTP-binding protein TrmE [Oribacterium sinus F0268] gi|227840993|gb|EEJ51332.1| tRNA modification GTP-binding protein TrmE [Oribacterium sinus F0268] Length = 456 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 26/174 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ N GKSSL+N LV + + A SN PG T+ V +D ++ ++ L+D G Sbjct: 226 GKPNAGKSSLLNCLV-KADKAIVSNIPGTTRDT---VEED---IRIGSLSLHLIDTAGI- 277 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD-KKAVSYQI 154 R + V+ G + R CV L++D +++ D+ + + L+ KKAV + Sbjct: 278 --RETEDIVEEIG--VNRAKEGIEKADCVLLVLDGSLPLEEEDRKILALLEGKKAV---V 330 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +L K+DK S +E LEK + +P V+P S+ + +G+E L + + E Sbjct: 331 LLNKMDKES-ILQKEELEK----LSGFP-----VLPISAKEGRGMEELGQKLEE 374 >gi|46581596|ref|YP_012404.1| GTP-binding protein EngA [Desulfovibrio vulgaris str. Hildenborough] gi|81698970|sp|Q725L9|DER_DESVH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|46451019|gb|AAS97664.1| GTP-binding protein EngA [Desulfovibrio vulgaris str. Hildenborough] gi|311235239|gb|ADP88093.1| ribosome-associated GTPase EngA [Desulfovibrio vulgaris RCH1] Length = 491 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 8/154 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N L+ R N A T + PG T+ + + + + + Sbjct: 4 KIALVGRPNVGKSTLFNRLI-RSNRAITHDMPGVTRDRMEGIVRGRNKRPFGIIDTGGIT 62 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY--LLIDCRHGVKQIDQDVFSFLDKK 148 + G+ + + I+R +E + CV L++D R G+ D+ + S+L + Sbjct: 63 LDGHAAVAEGPAGIRGFEAEILRQ-AEEAIAECVAVCLVVDGREGLLPFDEHLASYLRRT 121 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 +V+ K+D + +E + ++ I +P Sbjct: 122 GKPVLVVVNKVDGIE----KEDVLTAEFHILGFP 151 Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 11/145 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+A P + GR N GKSSL+N L N S+ G T+ D + K+ L Sbjct: 223 PEA-PLRLCMLGRPNAGKSSLVNALTG-TNRMIVSDVAGTTRD-----SVDVAFEKDGL- 274 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD G V+ + + L + L++D G+ D+ + Sbjct: 275 SYTFVDTAGVRRRSRITDTVERYS--VNSSLKSTTKAHVTLLVLDAVEGITSQDKRLIEL 332 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQE 169 LD++ + +++ K+D L P A+E Sbjct: 333 LDERKTPFMVLVNKMD-LVPAKARE 356 >gi|124267181|ref|YP_001021185.1| GTP-binding protein EngA [Methylibium petroleiphilum PM1] gi|166225824|sp|A2SHB1|DER_METPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|124259956|gb|ABM94950.1| putative GTP-binding protein EngA [Methylibium petroleiphilum PM1] Length = 446 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 17/184 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A +GR NVGKS+LIN + + L + PG T+ VP + N L Sbjct: 179 PIRLAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRD-AISVP-----FERNGQKFEL 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++++ + +V+ L + V LL+D GV D + ++ Sbjct: 232 IDTAGLRRKGKVFESIEKFS--VVKTLQAIADANVVLLLLDATQGVTDQDAHIAGYILDS 289 Query: 149 AVSYQIVLTK---IDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K +D Q ++E+ ++ P H S++KR+G+ + KA Sbjct: 290 GRAVVLAVNKWDAVDSYQRELLQRSIEQRLAFLKFAPVLH-----ISAIKRQGLGPVWKA 344 Query: 206 ILET 209 I + Sbjct: 345 IADA 348 >gi|254172434|ref|ZP_04879109.1| GTP-binding protein [Thermococcus sp. AM4] gi|214033363|gb|EEB74190.1| GTP-binding protein [Thermococcus sp. AM4] Length = 182 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 25/149 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L +K + PG T+ V ++ +VDM Sbjct: 2 IIFVGRSNVGKSTLIFRLTGKK--VKRGKRPGVTRKPVEVVWRN----------KRIVDM 49 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERS-TLRCVYLLIDC-----------RHGVKQID 138 PG+G+ P++ + IVR++ + + + L++D + G ID Sbjct: 50 PGFGFMSGLPREVQERIKDEIVRFIEDNADDIELAVLVVDGKAAPEIIERWEKRGEIPID 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTA 167 + F FL + + + + KID++ A Sbjct: 110 VEFFQFLRELEIPTVVAVNKIDRVKNVQA 138 >gi|120601244|ref|YP_965644.1| GTP-binding protein EngA [Desulfovibrio vulgaris DP4] gi|166198712|sp|A1V9V1|DER_DESVV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120561473|gb|ABM27217.1| small GTP-binding protein [Desulfovibrio vulgaris DP4] Length = 495 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 8/154 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N L+ R N A T + PG T+ + + + + + Sbjct: 4 KIALVGRPNVGKSTLFNRLI-RSNRAITHDMPGVTRDRMEGIVRGRNKRPFGIIDTGGIT 62 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY--LLIDCRHGVKQIDQDVFSFLDKK 148 + G+ + + I+R +E + CV L++D R G+ D+ + S+L + Sbjct: 63 LDGHAAVAEGPAGIRGFEAEILRQ-AEEAIAECVAVCLVVDGREGLLPFDEHLASYLRRT 121 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 +V+ K+D + +E + ++ I +P Sbjct: 122 GKPVLVVVNKVDGIE----KEDVLTAEFHILGFP 151 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 11/145 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+A P + GR N GKSSL+N L + S+ G T+ D + K+ L Sbjct: 227 PEA-PLRLCMLGRPNAGKSSLVNALTGTNRMI-VSDVAGTTRD-----SVDVAFEKDGL- 278 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + VD G V+ + + L + L++D G+ D+ + Sbjct: 279 SYTFVDTAGVRRRSRITDTVERYS--VNSSLKSTTKAHVTLLVLDAVEGITSQDKRLIEL 336 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQE 169 LD++ + +++ K+D L P A+E Sbjct: 337 LDERKTPFMVLVNKMD-LVPAKARE 360 >gi|147677317|ref|YP_001211532.1| GTPase [Pelotomaculum thermopropionicum SI] gi|146273414|dbj|BAF59163.1| predicted GTPase [Pelotomaculum thermopropionicum SI] Length = 411 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 24/186 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR N GKSSLIN L N +N+A S+ PG T + K L + Sbjct: 10 PRGSRLHIAIFGRRNAGKSSLINALTN-QNIAIVSDVPGTTTDPVY---KSMEILP--VG 63 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIV-RYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + ++D G +V G L V + + + + L+ID + + Sbjct: 64 PVVIIDTAGI-------DDVGELGQLRVKKTIGVLNKADLMVLVIDPGQDAGDYELGIIK 116 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ V VL KID L+P LE + +V+P S+V R+GIE L+ Sbjct: 117 KAKEQGVPVVGVLNKID-LNPAVTPAELESRLGI---------KVVPVSAVTRQGIENLK 166 Query: 204 KAILET 209 K ++ + Sbjct: 167 KEMIRS 172 >gi|57641889|ref|YP_184367.1| GTP-binding protein [Thermococcus kodakarensis KOD1] gi|57160213|dbj|BAD86143.1| probable GTP-binding protein [Thermococcus kodakarensis KOD1] Length = 183 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 27/190 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F+GRSNVGKS+LI L +K + PG T+ ++ +VD+ Sbjct: 2 IIFAGRSNVGKSTLIFQLTGKK--VKRGKRPGVTRR----------PIEIEWRGKRVVDL 49 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERST-LRCVYLLIDC-----------RHGVKQID 138 PG+G+ PK+ + IV ++ + + + L++D + G ID Sbjct: 50 PGFGFMSGLPKEVQERIKDEIVHFIEDNADRIELAVLVVDGKAAPEIIERWEKRGEIPID 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + FL + + + + KIDK+ A K+ + Y + +P S+ K Sbjct: 110 VEFYQFLRELEIPTIVAVNKIDKVKNVGAVINFLAEKFGV-PYGEVNETFVPISAKFGKN 168 Query: 199 IEVLRKAILE 208 ++ L KA++E Sbjct: 169 LDAL-KALME 177 >gi|288818845|ref|YP_003433193.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|288788245|dbj|BAI69992.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|308752432|gb|ADO45915.1| ribosome-associated GTPase EngA [Hydrogenobacter thermophilus TK-6] Length = 432 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 17/185 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +++F GR NVGKSSLIN ++ + + S G T+ VP ++ L+D Sbjct: 175 KVSFVGRPNVGKSSLINAILGSERVI-VSEVAGTTRD-AVEVPFEYKG-----KEFVLID 227 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R PK + R + V L++D G+ D+ + ++++ Sbjct: 228 TA--GIRRRPKVEYGVEFFAVGRSIKAIEMSDVVCLVLDISEGITNQDKKIAGLIERRFK 285 Query: 151 SYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE-VLRKAIL 207 IV K D K + AQ+ + K + + P ++ TS+++++GI+ +L AIL Sbjct: 286 GCVIVANKFDLVKATKEQAQDYIRKELHFLDFAP-----IVFTSAIRQEGIQDILDNAIL 340 Query: 208 ETINY 212 +Y Sbjct: 341 VYQDY 345 >gi|307253851|ref|ZP_07535704.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863211|gb|EFM95152.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 51 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 27/40 (67%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRK 53 FL P+I LP+ EIAF+GRSN GKS+ +N L N+K Sbjct: 11 FLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQK 50 >gi|307253850|ref|ZP_07535703.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863210|gb|EFM95151.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 116 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 9/101 (8%) Query: 106 SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ----IVLTKIDK 161 W + YL +R LR V +L+D RH +K +DQ + + AVS Q ++LTK DK Sbjct: 4 QWQKALGEYLQKRECLRGVVILMDIRHPLKDLDQQMIEW----AVSAQLPVLLLLTKADK 59 Query: 162 LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 LS + +T++ + I + +V S++ + GI+ L Sbjct: 60 LSQSARSKTVKMVREAILPF-QGDIQVEAYSALNKVGIDKL 99 >gi|331703092|ref|YP_004399779.1| tRNA modification GTPase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801647|emb|CBW53800.1| tRNA modification GTPase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 452 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 18/145 (12%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G++NVGKSS++N L+N A ++ PG T+ + + NL+N ++ L+D Sbjct: 221 AIVGQTNVGKSSILNALINEDK-AIVTDIPGTTRD----IVEGQINLEN--VSLNLIDTA 273 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID-QDVFSFLDKKAVS 151 G R V++ G L + L + L L + + + +D Q++F L K + Sbjct: 274 GI---RKTSDVVENLGILKSKNLINEADL---VLFVVNKENINDLDNQEIFDLLKDK--T 325 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKY 176 Y +++ K +KLS T Q LEK KY Sbjct: 326 YILIVNKAEKLSQTEKQ-NLEK-KY 348 >gi|313665711|ref|YP_004047582.1| tRNA modification GTPase TrmE [Mycoplasma leachii PG50] gi|312949836|gb|ADR24432.1| tRNA modification GTPase TrmE [Mycoplasma leachii PG50] Length = 452 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 18/145 (12%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G++NVGKSS++N L+N A ++ PG T+ + + NL+N ++ L+D Sbjct: 221 AIVGQTNVGKSSILNALINEDK-AIVTDIPGTTRD----IVEGQINLEN--VSLNLIDTA 273 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID-QDVFSFLDKKAVS 151 G R V++ G L + L + L L + + + +D Q++F L K + Sbjct: 274 GI---RKTSDVVENLGILKSKNLINEADL---VLFVVNKENINDLDNQEIFELLKNK--T 325 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKY 176 Y +++ K +KLS T Q LEK KY Sbjct: 326 YILIVNKAEKLSKTEKQ-NLEK-KY 348 >gi|83319722|ref|YP_424766.1| tRNA modification GTPase TrmE [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123535480|sp|Q2SR47|MNME_MYCCT RecName: Full=tRNA modification GTPase mnmE gi|83283608|gb|ABC01540.1| tRNA modification GTPase TrmE [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 452 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 18/145 (12%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G++NVGKSS++N L+N A ++ PG T+ + + NL+N ++ L+D Sbjct: 221 AIVGQTNVGKSSILNALINEDK-AIVTDIPGTTRD----IVEGQINLEN--VSLNLIDTA 273 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID-QDVFSFLDKKAVS 151 G R V++ G L + L + L L + + + +D Q++F L K + Sbjct: 274 GI---RKTSDVVENLGILKSKNLINEADL---VLFVVNKENINDLDNQEIFELLKDK--T 325 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKY 176 Y +++ K +KLS T Q LEK KY Sbjct: 326 YILIVNKAEKLSQTEKQ-NLEK-KY 348 >gi|23100946|ref|NP_694413.1| tRNA modification GTPase TrmE [Oceanobacillus iheyensis HTE831] gi|32171820|sp|Q8CX54|MNME_OCEIH RecName: Full=tRNA modification GTPase mnmE gi|22779181|dbj|BAC15447.1| tRNA modification GTPase [Oceanobacillus iheyensis HTE831] Length = 459 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 90/177 (50%), Gaps = 23/177 (12%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV ++N A + PG T+ + +++ N++ +P + LVD Sbjct: 225 AIIGRPNVGKSSLMNTLV-QENKAIVTEIPGTTRD----IIEEYVNVR-GVP-LRLVDTA 277 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G R + + S L + +++ + + D+ +F +D + Y Sbjct: 278 GI---RETEDIVERIGVDRSRQVLKESDL--ILFVLNYNEPLSEDDKKLFEAVD--GLEY 330 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +++ K D Q L++ + ++ P V+ T+ ++ +G++ L KAI +T Sbjct: 331 IVIINKTD----LEQQLDLDEVREFAKDRP-----VVTTALLEEQGVDELEKAIADT 378 >gi|256370714|ref|YP_003108539.1| GTP-binding protein EngA [Candidatus Sulcia muelleri SMDSEM] gi|256009506|gb|ACU52866.1| GTP-binding protein EngA [Candidatus Sulcia muelleri SMDSEM] Length = 438 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 11/178 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A GR NVGKS+LIN L+ +KN SN G T+ K F LV Sbjct: 180 PKLAIVGRPNVGKSTLINTLL-KKNQNIVSNISGTTRDSLEVFYKKFG------IECILV 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+N++ + ++R + LLID G++ D ++F ++ Sbjct: 233 DTAGIRKKNKIKENIEFYS--VMRAIKSIKNSDVCLLLIDSISGMESQDLNIFKIIENNN 290 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG-IEVLRKAI 206 +++ K D L E + K + P + TSS K+K I+ L+ AI Sbjct: 291 KGIILLINKCD-LIKNKFLEKIFKKQIKKIIAPFKDVPIFFTSSYKKKNLIKSLKTAI 347 >gi|316934143|ref|YP_004109125.1| GTP-binding protein Era [Rhodopseudomonas palustris DX-1] gi|315601857|gb|ADU44392.1| GTP-binding protein Era [Rhodopseudomonas palustris DX-1] Length = 308 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 33/183 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V +D S + LVD Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEDASQI-------ILVDT 70 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG APK+ +D +W G + + L CV L+D R G+ + +D+ + L Sbjct: 71 PGI---FAPKRRLDRAMVKTAWSG------AHDADLVCV--LLDARAGINEQAEDILANL 119 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR--NYPTAHPEVIPTSSVKRKGIEVLR 203 +VL KID ++ EK L + N A + S++ G++ LR Sbjct: 120 ANVDRPKLLVLNKIDLIAR-------EKLLALAQAANQRLAFDQTFMVSALTGDGVDDLR 172 Query: 204 KAI 206 KA+ Sbjct: 173 KAL 175 >gi|171913936|ref|ZP_02929406.1| GTP-binding protein [Verrucomicrobium spinosum DSM 4136] Length = 502 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 24/187 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA G+ N GKSSL+N ++ + S G T+ +P + KN L Sbjct: 218 PLRIAIVGKPNAGKSSLVNAILGEQRTI-VSEIAGTTRDA-IDIPCTVAG-KN----YTL 270 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + V+S+ + R+ L C+ L++DC G+ D+ + S + Sbjct: 271 VDTAGLRRKAKIQDAVESFSAMQATKTIRRADL-CL-LMVDCAEGISMQDRKIASLI--- 325 Query: 149 AVSYQ----IVLTKIDKLSPTTAQETLEKTKYLIRN-----YPTAHPEVIPTSSVKRKGI 199 V YQ I+L K D PT + ++T+ L+ N + H +IP S+ +++ + Sbjct: 326 -VEYQKPCIILLNKFDLYHPTGKMK--DRTEELLENAGREFFFLRHAPMIPVSAKEKQFL 382 Query: 200 EVLRKAI 206 + + KAI Sbjct: 383 DKVFKAI 389 >gi|332158357|ref|YP_004423636.1| GTP-binding protein [Pyrococcus sp. NA2] gi|331033820|gb|AEC51632.1| GTP-binding protein [Pyrococcus sp. NA2] Length = 190 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 34/196 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L ++ R PG T+ + + ++ N K ++DM Sbjct: 4 IIFVGRSNVGKSTLIYRLTGKR--VRRGKRPGVTRKI---IELEWKNHK-------VIDM 51 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERST-LRCVYLLIDC-----------RHGVKQID 138 PG+G+ P++ + IV ++ + + + L++D + G ID Sbjct: 52 PGFGFMLGLPREVQERIKDEIVHFIEDNADKIDVAVLVVDGKAAPEIIERWEKRGEIPID 111 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV----IPTSSV 194 + + FL + + + + KIDK+ Q + +L + E+ IP S+ Sbjct: 112 VEFYQFLRELNIPTIVAVNKIDKVK--NVQRVIH---FLAEKFGVPWSEIDKVFIPVSAK 166 Query: 195 KRKGIEVLRKAILETI 210 IE L+ I E I Sbjct: 167 FGDNIERLKNRIYEVI 182 >gi|261340815|ref|ZP_05968673.1| ribosome-associated GTPase EngA [Enterobacter cancerogenus ATCC 35316] gi|288317241|gb|EFC56179.1| ribosome-associated GTPase EngA [Enterobacter cancerogenus ATCC 35316] Length = 491 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 199 PQDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MQRDER 251 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 252 EFVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 309 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + S IV+ K D LS ++ E + Sbjct: 310 ILNSGRSLVIVVNKWDGLSNEVREQVKETLDF 341 >gi|109899427|ref|YP_662682.1| GTP-binding protein EngA [Pseudoalteromonas atlantica T6c] gi|123170868|sp|Q15R60|DER_PSEA6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|109701708|gb|ABG41628.1| small GTP-binding protein [Pseudoalteromonas atlantica T6c] Length = 482 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 9/143 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A P ++A G+ NVGKS+L N ++ + + + PG T+ + F+P ++ + Sbjct: 192 ASPIKLAIVGKPNVGKSTLTNRILGEERVV-VYDQPGTTRD-SIFIP-----MERDDREY 244 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G R+ + V+ + IV+ L V L+ID + GV D + F+ Sbjct: 245 VLIDTAGVRRRRSISEAVEKFS--IVKTLQAIEEANVVLLVIDAQEGVTDQDLSLLGFVL 302 Query: 147 KKAVSYQIVLTKIDKLSPTTAQE 169 S + + K D L+ E Sbjct: 303 NSGRSLVVAVNKWDGLAKDVKDE 325 >gi|302871642|ref|YP_003840278.1| small GTP-binding protein [Caldicellulosiruptor obsidiansis OB47] gi|302574501|gb|ADL42292.1| small GTP-binding protein [Caldicellulosiruptor obsidiansis OB47] Length = 607 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 37/180 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G NVGKS + N L R SN P T +N+ KD+ +VD Sbjct: 19 IALVGNPNVGKSVIFNKLTGRY--VEVSNYPSTTVDVNYGFYKDY----------VIVDT 66 Query: 92 PG-YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG YG + + + + + L+ + + V D H +D+D+F L ++ + Sbjct: 67 PGVYGISSFNDEEIVTRDIV----LNTQKIINVV----DSVH----LDRDLF--LTQQLI 112 Query: 151 SYQ----IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 YQ +VL D++ + +EK K ++ EVI TS+ + +GI+ L++AI Sbjct: 113 DYQKEVIVVLNMFDEIEKNDIKIDIEKLKDIL------GVEVIATSASRGEGIDKLKEAI 166 >gi|225848630|ref|YP_002728793.1| GTP-binding protein EngA [Sulfurihydrogenibium azorense Az-Fu1] gi|225644538|gb|ACN99588.1| ribosome-associated GTPase EngA [Sulfurihydrogenibium azorense Az-Fu1] Length = 443 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 13/182 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 ++A G+ N GKSSL+N ++N + + S+ PG T+ ++ KD + Sbjct: 182 KVAIVGKPNAGKSSLLNAILNEERVL-VSDIPGTTRDTVDTLFEKDSQRF-------LFL 233 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + V+ + + R + V L+ID G + DQ + + ++ Sbjct: 234 DTAGIRKRSKVEYGVEFFS--VGRSIEAIEKADVVVLVIDAIIGATEQDQKIAGLIQRRY 291 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 IV+ KID L ++ + + K + Y + ++ TS+ K+ GIE L I++ Sbjct: 292 KPAVIVINKIDMLKEKDIEKVIRQVKE--KLYFLDYAPIVLTSAYKKIGIEELLNQIVKV 349 Query: 210 IN 211 N Sbjct: 350 YN 351 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N L+ ++ A + PG T+ ++ +K +VD Sbjct: 4 VAIVGRPNVGKSSLFNRLIGKRK-AIVEDIPGVTRD-RIISQTEWRGVK-----FEVVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 GY + + D + I + + E + ++D + G+ +D+++ + L + Sbjct: 57 GGYITS-----DEDKFAPYIRKQVEKELQEADLLVFVVDGKQGLTPLDKEIATLLHRTEK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KID P EK K Y +VIP S++++ GI L I E I Sbjct: 112 PVIVAVNKID--DP-------EKEKLAYEFYELGFQDVIPISTIQKLGIADLLDKIYEYI 162 >gi|227328671|ref|ZP_03832695.1| GTP-binding protein EngA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 495 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 13/151 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P + + Sbjct: 203 PEDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRD-SIYIP-----MVRDER 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 256 EYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + S IV+ K D +S QE E+ K Sbjct: 314 ILNSGRSLVIVVNKWDGMS----QEAREQVK 340 >gi|218437570|ref|YP_002375899.1| tRNA modification GTPase TrmE [Cyanothece sp. PCC 7424] gi|218170298|gb|ACK69031.1| tRNA modification GTPase TrmE [Cyanothece sp. PCC 7424] Length = 458 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 226 VAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLVVGGIP-IQVLDT 278 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + V+ G R ++R+ L + L ID + G D++++ + + + Sbjct: 279 AGI---RETQDRVEKIGVERSRQAAQRADL--ILLTIDAQTGWTGEDEEIYQQVKHRPLI 333 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +++ K D S T NYP +++ T + K +GIE L + IL ++ Sbjct: 334 --LIINKTDLASADTI------------NYPWEITQIVTTVAAKSEGIEDLEQMILNSVQ 379 >gi|291279462|ref|YP_003496297.1| small GTP-binding protein [Deferribacter desulfuricans SSM1] gi|290754164|dbj|BAI80541.1| small GTP-binding protein [Deferribacter desulfuricans SSM1] Length = 438 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 25/179 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 + GR NVGKS+L N L ++ +A + PG T+ L + + K +VD Sbjct: 4 VGIIGRPNVGKSTLFNRLAGKR-IAIVDDMPGVTRDRLEYIAEWEGKKFK-------IVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 GY K +I ++ + LL+D + G+ +D+ V + L ++ Sbjct: 56 TCGYDLREELLKK-----EMIKQFYASLDEADFFVLLVDAKEGLHPLDEMVCNILREREK 110 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN-YPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V K+D EK + + + Y E+IP S+ K +++L I+E Sbjct: 111 KFIVVANKVDN----------EKLQSFVADFYQLGVEEIIPISATHGKNVDILLDKIIE 159 >gi|154337858|ref|XP_001565155.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 525 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 10/67 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GR++ GKSSL+N +VN + + G T L F+ N+ N L LV Sbjct: 272 PEVAFIGRTSSGKSSLVNAIVN-AMITPYGHLRGTTSSLRFY------NIANRL---LLV 321 Query: 90 DMPGYGY 96 D PGYG+ Sbjct: 322 DCPGYGH 328 >gi|322499215|emb|CBZ34286.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 672 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 10/67 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GR++ GKSSL+N +VN + + G T L F+ N+ N L LV Sbjct: 419 PEVAFIGRTSSGKSSLVNAIVN-AMITPYGHLRGTTNSLRFY------NVANRL---MLV 468 Query: 90 DMPGYGY 96 D PGYG+ Sbjct: 469 DCPGYGH 475 >gi|42560644|ref|NP_975095.1| tRNA modification GTPase TrmE [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81400855|sp|Q6MUE7|MNME_MYCMS RecName: Full=tRNA modification GTPase mnmE gi|42492140|emb|CAE76737.1| tRNA modification GTPase, TrmE [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320928|gb|ADK69571.1| tRNA modification GTPase TrmE [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 452 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 16/155 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G++NVGKSS++N L+N A ++ PG T+ + + NL+N ++ L+D Sbjct: 221 AIIGQTNVGKSSILNALINEDK-AIVTDIPGTTRD----IVEGQINLEN--VSLNLIDTA 273 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID-QDVFSFLDKKAVS 151 G R V++ G L + L + L L + + + +D Q++F L K + Sbjct: 274 GI---RKTSDVVENLGILKSKNLINEADL---VLFVVNKENINDLDNQEIFELLKNK--T 325 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 Y +++ K +KLS T Q +K + ++ H Sbjct: 326 YILIVNKAEKLSKTEKQNLEKKYQNIVFTSAINHD 360 >gi|322504996|emb|CAM36590.2| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 525 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 10/67 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GR++ GKSSL+N +VN + + G T L F+ N+ N L LV Sbjct: 272 PEVAFIGRTSSGKSSLVNAIVN-AMITPYGHLRGTTSSLRFY------NIANRL---LLV 321 Query: 90 DMPGYGY 96 D PGYG+ Sbjct: 322 DCPGYGH 328 >gi|255525663|ref|ZP_05392596.1| small GTP-binding protein [Clostridium carboxidivorans P7] gi|296185422|ref|ZP_06853832.1| ribosome-associated GTPase EngA [Clostridium carboxidivorans P7] gi|255510649|gb|EET86956.1| small GTP-binding protein [Clostridium carboxidivorans P7] gi|296050256|gb|EFG89680.1| ribosome-associated GTPase EngA [Clostridium carboxidivorans P7] Length = 438 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 9/136 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IAF G+ NVGKSSLIN L+ + S PG T+ D S L+ L+D Sbjct: 178 KIAFVGKPNVGKSSLINKLLGEDRVI-VSEIPGTTRD-----AID-SYLETEQGKFTLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ ++ + + ER+ + C+ L++D HG+ D+ + + + + Sbjct: 231 TAGLRRKSKVKEEIERYSVIRTYTAIERADV-CI-LMLDATHGITDQDEKIIGYAHEMSK 288 Query: 151 SYQIVLTKIDKLSPTT 166 + +++ K D + T Sbjct: 289 AIMVIVNKWDLVEKDT 304 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 28/171 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N + ++ ++ + PG T+ + ++ LK N Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKMAGKR-ISIVQDTPGVTRD-RIYAEAEW--LKYNF---T 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G +N D +I+ + ++T+ + ++D + G+ D++V Sbjct: 55 IIDTGG-----IEPENSD----IIISQMRRQATMAVETANVIVFIVDGKQGLTDADKEVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K +V+ KID L E Y N P I S Sbjct: 106 QMLRKSKKPVVLVVNKIDSLKD-------EDNAYEFYNLGIGEPIAISASQ 149 >gi|242240151|ref|YP_002988332.1| GTP-binding protein EngA [Dickeya dadantii Ech703] gi|242132208|gb|ACS86510.1| small GTP-binding protein [Dickeya dadantii Ech703] Length = 494 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 15/153 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 201 VPADQPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MERDE 253 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 254 REYILIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQDLSLL 310 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 F+ S IV+ K D LS QE E+ K Sbjct: 311 GFILNSGRSLVIVVNKWDGLS----QEIKEQVK 339 >gi|330999189|ref|ZP_08322908.1| ribosome biogenesis GTPase Era [Parasutterella excrementihominis YIT 11859] gi|329575389|gb|EGG56933.1| ribosome biogenesis GTPase Era [Parasutterella excrementihominis YIT 11859] Length = 303 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 24/179 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN LV K ++ TS P T+ V L + VD Sbjct: 18 VAVIGRPNVGKSTLINALVGEK-VSITSKKPQTTRDRIMGV------LTTDNAQYLFVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDK 147 PG+ + + L+ R S RS+L V ++I+ G + DQ V + L K Sbjct: 71 PGFQTKHSSE--------LLARMNQSVRSSLSDVDAVVMVIEA-TGWRPEDQVVLNLLSK 121 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A + + + K D++ + A L K + +P A +V+P S+ K + ++VL I Sbjct: 122 DAKNVILAINKTDEVKESEAMLPL--IKEAMEKFPFA--DVVPVSAEKTRQLDVLLDVI 176 >gi|325180037|emb|CCA14439.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1955 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKLSPTTAQETLEKTKYLI 178 ID + T + LI Sbjct: 62 IDAVRAEWPMLTFDTMPLLI 81 >gi|325180027|emb|CCA14429.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1955 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKLSPTTAQETLEKTKYLI 178 ID + T + LI Sbjct: 62 IDAVRAEWPMLTFDTMPLLI 81 >gi|320175074|gb|EFW50187.1| GTP-binding protein EngA [Shigella dysenteriae CDC 74-1112] Length = 490 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ + + Sbjct: 251 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQELSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D LS ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLSQEVKEQVKETLDF 340 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|325180031|emb|CCA14433.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1944 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKLSPTTAQETLEKTKYLI 178 ID + T + LI Sbjct: 62 IDAVRAEWPMLTFDTMPLLI 81 >gi|146087234|ref|XP_001465766.1| hypothetical protein [Leishmania infantum JPCM5] gi|134069866|emb|CAM68193.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 670 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 10/67 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 PE+AF GR++ GKSSL+N +VN + + G T L F+ N+ N L LV Sbjct: 417 PEVAFIGRTSSGKSSLVNAIVN-AMITPYGHLRGTTNSLRFY------NVANRL---MLV 466 Query: 90 DMPGYGY 96 D PGYG+ Sbjct: 467 DCPGYGH 473 >gi|325180028|emb|CCA14430.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1936 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKLSPTTAQETLEKTKYLI 178 ID + T + LI Sbjct: 62 IDAVRAEWPMLTFDTMPLLI 81 >gi|325180038|emb|CCA14440.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1963 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKLSPTTAQETLEKTKYLI 178 ID + T + LI Sbjct: 62 IDAVRAEWPMLTFDTMPLLI 81 >gi|75908210|ref|YP_322506.1| tRNA modification GTPase TrmE [Anabaena variabilis ATCC 29413] gi|123758831|sp|Q3MBM5|MNME_ANAVT RecName: Full=tRNA modification GTPase mnmE gi|75701935|gb|ABA21611.1| tRNA modification GTPase trmE [Anabaena variabilis ATCC 29413] Length = 463 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 27/183 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N ++ + A ++ PG T+ + + + +P L D Sbjct: 227 KVAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-D 279 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G + R +T V L ID G DQ+++ + + + Sbjct: 280 TAGI---RETSDQVEKIG--VERSRQAANTADLVLLTIDAATGWTTGDQEIYEQVKHRPL 334 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ KID + K LI + YP +++ T++ +++GI+ L AILE Sbjct: 335 I--LVMNKIDLVD-----------KKLITSLEYPKNITQIVHTAAAQKQGIDALETAILE 381 Query: 209 TIN 211 + Sbjct: 382 IVQ 384 >gi|163802959|ref|ZP_02196846.1| GTP-binding protein Era [Vibrio sp. AND4] gi|159173249|gb|EDP58077.1| GTP-binding protein Era [Vibrio sp. AND4] Length = 320 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D + A+ VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD-----GDYQAI-YVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H D+ V + L K Sbjct: 82 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTND-DEMVLTKLQKSNF 135 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D + Q +E +K + +V+P S+ K IEVLRK + Sbjct: 136 PVVLCVNKVDNVQDRNEVMQHMMEMSKRM------DFVDVVPISAKHGKNIEVLRKHV 187 >gi|217077014|ref|YP_002334730.1| GTP-binding protein Era [Thermosipho africanus TCF52B] gi|226741399|sp|B7IH25|ERA_THEAB RecName: Full=GTPase Era gi|217036867|gb|ACJ75389.1| era GTP-binding protein Era [Thermosipho africanus TCF52B] Length = 299 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFF-VPKDFSNLKNNLPAMALV 89 +A +G+ NVGKSS++N +V +K L S+ P T++ +N DF + V Sbjct: 6 VALAGKPNVGKSSIVNAIVGKKILI-VSDKPQTTRNRINVIHTTDDFQ--------IIFV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG P + + ++ +S + + ++D + GV + ++ VF ++++ Sbjct: 57 DTPG---IHKPLYRLGEY--MVKAAVSALKGVDLILTVVDAKEGVGKPERFVFDYVNQSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V+ KID + ++ + K + N ++ TS+V+ +GI+ L I+E Sbjct: 112 TKTIGVINKIDLVDAKKVEQIYNEIKNSLENCVG----IVKTSAVRGEGIKELLDLIVEN 167 Query: 210 I 210 + Sbjct: 168 L 168 >gi|167031915|ref|YP_001667146.1| GTP-binding protein EngA [Pseudomonas putida GB-1] gi|189037155|sp|B0KPJ1|DER_PSEPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166858403|gb|ABY96810.1| small GTP-binding protein [Pseudomonas putida GB-1] Length = 487 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + + + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRD------RQYGDATWQGRSFILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFSF 144 D G D G + ++E+S + V L+D R G+ DQ + Sbjct: 56 DTGGI--------TGDEVG--MDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K+ S +V KID + P A+ P IP + + +GI L + Sbjct: 106 LRKRNKSAILVANKIDNIDPDVARAEFS---------PMGMGNAIPVAGSQGRGINALME 156 Query: 205 AIL 207 A+L Sbjct: 157 AVL 159 Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + + PG T+ + ++P + + Sbjct: 186 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDEPGTTRD-SIYIP-----FERD 238 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 296 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D + P Sbjct: 297 GFALEAGRAIVIALNKWDGMEP 318 >gi|209763424|gb|ACI80024.1| putative GTP-binding factor [Escherichia coli] Length = 503 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 211 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 263 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 264 EYVLIDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 320 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D L ++ E + Sbjct: 321 FILNSGRSLVIVVNKWDGLRQEVKEQVKETLDF 353 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 16 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 59 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 118 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 119 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 169 Query: 205 AIL 207 +L Sbjct: 170 HVL 172 >gi|297584643|ref|YP_003700423.1| GTP-binding protein Era [Bacillus selenitireducens MLS10] gi|297143100|gb|ADH99857.1| GTP-binding protein Era [Bacillus selenitireducens MLS10] Length = 302 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 23/178 (12%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKS+L+N ++ +K +A S+ P T++ V L + + +D P Sbjct: 12 ALVGRPNVGKSTLLNQVLGQK-IAIMSDKPQTTRNRIQGV------LTDERGQIVFIDTP 64 Query: 93 GYGYARAPKKNV-DSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G PK + D L + L E + V L+D + G D+ + L+ Sbjct: 65 G---IHKPKHRLGDFMTKLAQQALRE---VDVVLFLVDAKEGKGAGDEYIIRKLENLETP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAIL 207 +V+ KID++ P E+ +I Y +P EVIP S++ +E L + + Sbjct: 119 VFLVINKIDEVHP-------EELLSIIAGYKDLYPFAEVIPVSALNGNNVETLLEQVF 169 >gi|224538904|ref|ZP_03679443.1| hypothetical protein BACCELL_03800 [Bacteroides cellulosilyticus DSM 14838] gi|224519482|gb|EEF88587.1| hypothetical protein BACCELL_03800 [Bacteroides cellulosilyticus DSM 14838] Length = 466 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 23/194 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D +N+ Sbjct: 215 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTTNIG 268 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ- 139 +D G R ++S G I R + V +ID Q++Q Sbjct: 269 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLEQAEIVLWMIDATDATSQMNQL 321 Query: 140 --DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + L++K + +V K D L + E L +I P A E I S+ KR+ Sbjct: 322 SGQILPRLERKHLI--LVFNKADLLGTAHSGEVLSAASSII---PDA--ECIFISAKKRQ 374 Query: 198 GIEVLRKAILETIN 211 +VL+K ++ N Sbjct: 375 NTDVLQKKLIAAAN 388 >gi|84390105|ref|ZP_00991367.1| GTP-binding protein Era [Vibrio splendidus 12B01] gi|86146358|ref|ZP_01064682.1| GTP-binding protein Era [Vibrio sp. MED222] gi|218710568|ref|YP_002418189.1| GTP-binding protein Era [Vibrio splendidus LGP32] gi|84376759|gb|EAP93634.1| GTP-binding protein Era [Vibrio splendidus 12B01] gi|85835837|gb|EAQ53971.1| GTP-binding protein Era [Vibrio sp. MED222] gi|218323587|emb|CAV19827.1| GTP-binding protein era homolog [Vibrio splendidus LGP32] Length = 323 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 32/192 (16%) Query: 26 KAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFS 77 K G PE IA GR NVGKS+L+N ++ +K ++ TS P T+H + D+ Sbjct: 20 KTGLPENQHCGFIAIVGRPNVGKSTLLNHILGQK-ISITSRKPQTTRHRIMGVETEGDYQ 78 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQ 136 + VD PG N L+ R S S + V+ L+D H Sbjct: 79 AI--------YVDTPGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTDD 125 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ V + L K + + K+D + T Q +E +K + +V+P S+ Sbjct: 126 -DEMVLNKLRKTDFPVVLCINKVDNVQDRTDVMQHMMEVSKKM------DFLDVVPISAK 178 Query: 195 KRKGIEVLRKAI 206 + K I+VLRK + Sbjct: 179 QGKNIDVLRKHV 190 >gi|303257000|ref|ZP_07343014.1| GTP-binding protein Era [Burkholderiales bacterium 1_1_47] gi|302860491|gb|EFL83568.1| GTP-binding protein Era [Burkholderiales bacterium 1_1_47] Length = 303 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 34/184 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN LV K ++ TS P T+ V L + VD Sbjct: 18 VAVIGRPNVGKSTLINALVGEK-VSITSKKPQTTRDRIMGV------LTTDNAQYLFVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDK 147 PG+ + + L+ R S RS+L V ++I+ G + DQ V + L K Sbjct: 71 PGFQTKHSSE--------LLARMNQSVRSSLSDVDAVVMVIEA-TGWRPEDQVVLNLLSK 121 Query: 148 KAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 A + + + K D++ + A +E++EK +P A +V+P S+ K + ++VL Sbjct: 122 DAKNVILAINKTDEVKESEAMLPLIKESMEK-------FPFA--DVVPVSAEKTRQLDVL 172 Query: 203 RKAI 206 I Sbjct: 173 LDVI 176 >gi|284006778|emb|CBA72042.1| GTP-binding protein [Arsenophonus nasoniae] Length = 493 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 9/156 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 + L E P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 190 VALESSEEEAFDPRSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDLPGTTRD-SIYI 247 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 P ++ + L+D G + V+ + +++ L V L+ID R Sbjct: 248 P-----MERDGCEYVLIDTAGVRKRGKITETVEKFS--VIKTLQSIEDANVVLLVIDARQ 300 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 G+ D + F+ S I + K D +S Q Sbjct: 301 GISDQDLSLLGFILNAGRSLVIAVNKWDGMSQEDRQ 336 >gi|159905767|ref|YP_001549429.1| GTP-binding protein [Methanococcus maripaludis C6] gi|159887260|gb|ABX02197.1| GTP-binding protein HSR1-related [Methanococcus maripaludis C6] Length = 227 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 28/198 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++ GRSNVGKS+ + LV KN+ R PG T + + ++ LV Sbjct: 35 PKVIVMGRSNVGKSTFVK-LVTGKNV-RVGKKPGVTLKITEY----------DMGTYILV 82 Query: 90 DMPGYGYARA-PKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCR-----------HGVKQ 136 D+PG+G+ KK + I+ Y+ + + T+ ++D + G Sbjct: 83 DLPGFGFMEGIEKKAQEKIKDQIIEYVEDNKDTIAASIHILDAKSFIDIVERWDNKGEVP 142 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH---PEVIPTSS 193 ID ++ FL++ ++ V+ K+DK+ + L++ + P +P + Sbjct: 143 IDLEMADFLEELELNPIFVVNKMDKIKNSEWDNHLDRVSETLGFLPPWRQWLDNFVPAIT 202 Query: 194 VKRKGIEVLRKAILETIN 211 GI+ ++ I + IN Sbjct: 203 RDNYGIDGIKHRINKRIN 220 >gi|83590125|ref|YP_430134.1| small GTP-binding protein domain-containing protein [Moorella thermoacetica ATCC 39073] gi|83573039|gb|ABC19591.1| iron-only hydrogenase maturation protein HydF [Moorella thermoacetica ATCC 39073] Length = 405 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 83/188 (44%), Gaps = 28/188 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR N GKSSLIN L N ++LA S+ PG T V K L L Sbjct: 5 PRGNRLHIAIFGRRNAGKSSLINALTN-QDLAVVSSVPGTTTD---PVMKSMEILP--LG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G +V G L V+ E R+ L L++D G + ++ Sbjct: 59 PVVLIDTAGI-------DDVGELGTLRVKKTMEVLRRTDL--AILVLDPAAGAGPYELEL 109 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L ++ + IVL KID+ LEK T V+P S++ R+GIE Sbjct: 110 QQRLKEERLPLVIVLNKIDQ-GGMELLPGLEK---------TLGQRVLPVSALTRQGIEE 159 Query: 202 LRKAILET 209 L+ +++ Sbjct: 160 LKGELIKA 167 >gi|50122138|ref|YP_051305.1| GTP-binding protein EngA [Pectobacterium atrosepticum SCRI1043] gi|81827050|sp|Q6D280|DER_ERWCT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|49612664|emb|CAG76114.1| probable GTP-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 495 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 13/151 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P + + Sbjct: 203 PEDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MVRDER 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 256 EYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + S IV+ K D LS QE ++ K Sbjct: 314 ILNSGRSLVIVMNKWDGLS----QEVRDQVK 340 >gi|331269697|ref|YP_004396189.1| small GTP-binding protein [Clostridium botulinum BKT015925] gi|329126247|gb|AEB76192.1| small GTP-binding protein [Clostridium botulinum BKT015925] Length = 438 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 15/169 (8%) Query: 32 IAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKSSLIN IL K++ SN PG T+ ++ ++ ++ AL+ Sbjct: 179 IAMVGRPNVGKSSLINRILGEEKHI--VSNIPGTTRDSVDSYIEREEGKF-------ALI 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ V+ + VR ++ L++D G+ + D+ + + + Sbjct: 230 DTAGLRRKSKIKEQVERYSA--VRTIASIENADVCILMLDAEQGIAEQDEKIIGYAHELN 287 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + +++ K D + T + +K +Y + P A I + +R Sbjct: 288 KAIMVIVNKWDLIEKDDKTMKNFKDKLRYELSFLPYASFLFISAKTGQR 336 Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 28/171 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L ++ +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-IAIVDDMPGVTRD-RIYAQAEWLNNK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G P+ +IV + ++ + V ++D + G+ D++V Sbjct: 55 IIDTGGI----EPESE-----DVIVAQMRRQAQMAIEMADVVLFIVDGKQGLADADREVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K S + + KID+ L+ Y N P I +S Sbjct: 106 QMLRKANKSIVLAVNKIDR-------HQLDDNIYEFYNLGLGDPMAISSSQ 149 >gi|295676899|ref|YP_003605423.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002] gi|295436742|gb|ADG15912.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002] Length = 445 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + +V DF +N P L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVI-AFDMPGTTRD-SIYV--DFE--RNGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 292 ALVVGVNKWDGLDPHVRERT 311 >gi|291000700|ref|XP_002682917.1| small GTPase [Naegleria gruberi] gi|284096545|gb|EFC50173.1| small GTPase [Naegleria gruberi] Length = 644 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 29/191 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-------HLNFFVPKDFSNLKNNLP 84 +A GR NVGKS+L N L+ R++ + N+PG T+ + P + S + + Sbjct: 39 VAIIGRENVGKSTLFNSLLGRQH-SIVHNSPGVTRDCQEAKTQIKLKYPMNVSEVVFDKK 97 Query: 85 A---------MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 A +D PG + + +I + ++ L+ DCR G++ Sbjct: 98 ARKRLIKKISCTFIDTPGANFMES----------IIQQTQDSIASSNVALLVTDCRDGLQ 147 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D V ++L+ K + +L K D P ++ E + + +N + + IP SS Sbjct: 148 KWDYHVANYLEMKGIPALHILNKCD--GPLMRGDSDELEEVISKNTIPSLGKPIPISSEM 205 Query: 196 RKGIEVLRKAI 206 + G++ + AI Sbjct: 206 KIGMDQIVSAI 216 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 37/148 (25%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GRSNVGKS+L+N L+ + RTS+ PG T ++ + A+ + Sbjct: 371 LAIIGRSNVGKSTLLNHLIGEER-TRTSSTPGTT--------------RDTIEVEAINEK 415 Query: 92 PGYGY------ARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLIDCRH------- 132 G Y KK+ D+ + +S + T R + L++D H Sbjct: 416 TGQHYLICDTAGIRKKKHTDTDR---IEQMSLKDTYRTIKYANVCCLVVDPTHNISGEGY 472 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKID 160 G+ Q D D+ ++K+ S I K D Sbjct: 473 GLTQQDLDIARMVEKEGRSLVIACNKWD 500 >gi|224124764|ref|XP_002319416.1| predicted protein [Populus trichocarpa] gi|222857792|gb|EEE95339.1| predicted protein [Populus trichocarpa] Length = 206 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/37 (59%), Positives = 28/37 (75%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 P G PEIAF+GRS+VGKSSL+N L + +ARTS+ Sbjct: 132 FPPPGLPEIAFAGRSSVGKSSLLNSLTRQWGVARTSS 168 >gi|325180030|emb|CCA14432.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1970 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKL 162 ID + Sbjct: 62 IDAV 65 >gi|291085040|ref|ZP_06570912.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220] gi|291071734|gb|EFE09843.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220] Length = 504 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 212 PQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MERDGR 264 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 265 EYVLIDTAGVRKRGKITEAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSLLGF 322 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + S IV+ K D L+ ++ E + Sbjct: 323 ILNSGRSLVIVVNKWDGLTQEVKEQVKETLDF 354 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 17 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 59 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 60 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 119 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A +I Y E+ P ++ +G+ L + Sbjct: 120 LRARQKPTFLVANKTDGLDPDQA---------VIDFYSLGLGEIHPIAASHGRGVLSLLE 170 Query: 205 AIL 207 +L Sbjct: 171 HVL 173 >gi|319944432|ref|ZP_08018706.1| selenocysteine-specific translation elongation factor [Lautropia mirabilis ATCC 51599] gi|319742393|gb|EFV94806.1| selenocysteine-specific translation elongation factor [Lautropia mirabilis ATCC 51599] Length = 726 Score = 45.1 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 3/119 (2%) Query: 91 MPGYGYARAPKKNVDSWG--GLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +P +G R P +D G L+ +S + + LL+ GV ++ + L Sbjct: 71 VPAFGLPREPIAFIDVPGHEKLLHTMISGATGIDFALLLVAADDGVMPQTREHLAVLSLL 130 Query: 149 AVSYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V +TKID++ QE ++ L+ + P AH +IP S+ + G+ LR+ + Sbjct: 131 GIDRGVVAITKIDRVDEARVQEVAQQVTALLADTPLAHAPIIPVSATRGDGVVELRQLL 189 >gi|291286763|ref|YP_003503579.1| selenocysteine-specific translation elongation factor [Denitrovibrio acetiphilus DSM 12809] gi|290883923|gb|ADD67623.1| selenocysteine-specific translation elongation factor [Denitrovibrio acetiphilus DSM 12809] Length = 617 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 25/176 (14%) Query: 35 SGRSNVGKSSLINILVNRKNLARTSNAPGR---TQHLNFFVPKDFSNLKNNLPAMALVDM 91 +G + GKSSL+ LA T P R + + F+ ++ ++ VD+ Sbjct: 10 AGHIDHGKSSLV--------LALTGKDPDRLKAEKEKGITIELGFAGMETEQANISFVDV 61 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG+ GLI ++ V +D R GV+Q + ++ + V Sbjct: 62 PGHE-------------GLIKTMIAGSVGFDSVLFCVDSREGVRQQTIEHYNIIRTIGVR 108 Query: 152 YQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 Y +V LTK D SP Q + L +++ T+ +K IE LR+AI Sbjct: 109 YCVVALTKTDIASPEQIQSAENGVRKLFAACAIKISDIVHTNINDQKSIEKLREAI 164 >gi|209521123|ref|ZP_03269851.1| small GTP-binding protein [Burkholderia sp. H160] gi|209498433|gb|EDZ98560.1| small GTP-binding protein [Burkholderia sp. H160] Length = 445 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + +V DF +N P L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVI-AFDMPGTTRD-SIYV--DFE--RNGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 292 ALVVGVNKWDGLDPHVRERT 311 >gi|325180033|emb|CCA14435.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1978 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKL 162 ID + Sbjct: 62 IDAV 65 >gi|170591761|ref|XP_001900638.1| Elongation factor Tu GTP binding domain containing protein [Brugia malayi] gi|158591790|gb|EDP30393.1| Elongation factor Tu GTP binding domain containing protein [Brugia malayi] Length = 1125 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 24/142 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP--------KDFSNLK 80 P I G + GK+ +++ + R+ + A G TQ + VP K FS + Sbjct: 540 PVICVLGHVDTGKTKMLDTI--RRTNVQDGEAGGITQQIGATQVPAAAIMERTKMFSGSE 597 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +P + ++D PG+ N+ S G + Y L++D HG++Q + Sbjct: 598 MKIPGLLIIDTPGH----ESFSNLRSRGSSLCDY---------AILVVDLMHGLEQQTLE 644 Query: 141 VFSFLDKKAVSYQIVLTKIDKL 162 F+ L K+ + I L KID+L Sbjct: 645 SFNLLRKRQTPFVIALNKIDRL 666 >gi|325180039|emb|CCA14441.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1956 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKL 162 ID + Sbjct: 62 IDAV 65 >gi|325180029|emb|CCA14431.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1959 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKL 162 ID + Sbjct: 62 IDAV 65 >gi|114332129|ref|YP_748351.1| GTP-binding protein EngA [Nitrosomonas eutropha C91] gi|122313190|sp|Q0AE46|DER_NITEC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|114309143|gb|ABI60386.1| small GTP-binding protein [Nitrosomonas eutropha C91] Length = 468 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 15/160 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA +GR NVGKS+LIN L+ + + + PG T+ + ++ ++ + L+ Sbjct: 179 PVIAIAGRPNVGKSTLINTLLGEERMI-AFDQPGTTRD-SIYIDFEYGQRR-----YTLI 231 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + V+ + +V+ L V L++D + G+ + D + F+ + Sbjct: 232 DTAGLRRSGKVWETVEKFS--VVKTLQSIEAANVVVLVLDAQSGISEQDAHIAGFILETG 289 Query: 150 VSYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAH 185 + I + K D + TT +E K +L N+ H Sbjct: 290 RALVIAINKWDGMDDYQRDTTKREFERKLAFL--NFANLH 327 >gi|330837623|ref|YP_004412264.1| GTP-binding protein engA [Spirochaeta coccoides DSM 17374] gi|329749526|gb|AEC02882.1| GTP-binding protein engA [Spirochaeta coccoides DSM 17374] Length = 547 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 11/149 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ N GKS+L N+LV ++ ++ S+ PG T+ + V DF L P ++D Sbjct: 197 KLAVLGKPNTGKSTLTNLLVGQE-VSIVSDIPGTTRDV---VSGDF--LYKGTP-FTILD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++V+ + + R + V L+ID + G+ D+ + + ++ Sbjct: 250 TAGIRRKSKVDEDVEYYS--VNRAIKTIDESNVVLLMIDAQEGIADQDKKIAQLIVRRGK 307 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 +VL KID LS Q LE K +R Sbjct: 308 GVVLVLNKIDALS--GIQNQLEAIKDRVR 334 >gi|325180035|emb|CCA14437.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1986 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKL 162 ID + Sbjct: 62 IDAV 65 >gi|291523016|emb|CBK81309.1| iron-only hydrogenase maturation protein HydF [Coprococcus catus GD/7] Length = 401 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 34/178 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP--AMALV 89 I F GR N GKSSL+N V + LA S+ G T S LP + ++ Sbjct: 14 IGFFGRRNAGKSSLVN-AVTGQELAVVSDTRGTTTD-------PVSKAMELLPIGPVVII 65 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI-DCRHGVKQIDQDVFSFLDKK 148 D PG+ + + G L VR + V +L+ DC G+K D+++ +K Sbjct: 66 DTPGF-------DDEGALGELRVRKTRQILNKSDVAVLVADCTEGLKDCDRELIEIFRQK 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + +V K D L P +P A I S+ ++ IE L++ I Sbjct: 119 EIPWLLVWNKCD-LKP---------------EHPEAKENEIYVSATEKIEIEALKEKI 160 >gi|15791327|ref|NP_281151.1| GTP-binding protein [Halobacterium sp. NRC-1] gi|169237086|ref|YP_001690286.1| GTP-binding protein [Halobacterium salinarum R1] gi|13124209|sp|Q9HME0|ENGB_HALSA RecName: Full=Probable GTP-binding protein EngB gi|229807535|sp|B0R871|ENGB_HALS3 RecName: Full=Probable GTP-binding protein EngB gi|10581972|gb|AAG20631.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167728152|emb|CAP14940.1| putative GTP-binding protein [Halobacterium salinarum R1] Length = 206 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 31/193 (16%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMAL 88 E+ GRSNVGKS+L+ + + T PG T+ N F +DF L Sbjct: 11 EVVLVGRSNVGKSTLMRAVTGHQ--VPTGQKPGVTRQPNHFDWASEDF----------ML 58 Query: 89 VDMPGYGYARAPKK-NVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQ------- 139 D+PG+GY + + + ++ +VRY+ S + L++D + V ID+ Sbjct: 59 TDLPGFGYMQGVEDGHEEAIKTEVVRYVESHADNIMVGVLVLDGKAAVDIIDRHSGGDEI 118 Query: 140 ----DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSS 193 +++ L++ V + + K+DK+ E L + YP +VI + Sbjct: 119 PHVVELYYLLEELGVQPVVAVNKMDKVD--DRDERLNDIADRLGLYPPWEQWQDVIAPIT 176 Query: 194 VKRKGIEVLRKAI 206 K+ I L A+ Sbjct: 177 AKKDRIAALEDAV 189 >gi|302846043|ref|XP_002954559.1| hypothetical protein VOLCADRAFT_121318 [Volvox carteri f. nagariensis] gi|300260231|gb|EFJ44452.1| hypothetical protein VOLCADRAFT_121318 [Volvox carteri f. nagariensis] Length = 269 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 27/191 (14%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--- 85 P +A GR NVGKSSL+N + + + + G T +D + + LP Sbjct: 49 PLAVAIVGRPNVGKSSLLNAIAGEER-SIVCDLSGTT--------RDAVDTRVTLPGGQR 99 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLIDCRHGVKQIDQ 139 + L+D G R + DS G LS +R V L+ID GV Q D Sbjct: 100 LTLIDTAGI---RKRSRVADSPDG--AEQLSVDRAMRAVRRADVAVLVIDAVEGVTQQDF 154 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + + S +V+ K D++ P + ++ E K +R+ A V+ TS++ + Sbjct: 155 RLSELFASEGKSVVVVVNKWDRVDPRIWSVEKMAENVKTQLRHVSWAS--VVCTSAISGR 212 Query: 198 GIEVLRKAILE 208 +E + +A+L+ Sbjct: 213 HVEDVLEAVLD 223 >gi|157364263|ref|YP_001471030.1| tRNA modification GTPase TrmE [Thermotoga lettingae TMO] gi|205829181|sp|A8F732|MNME_THELT RecName: Full=tRNA modification GTPase mnmE gi|157314867|gb|ABV33966.1| tRNA modification GTPase TrmE [Thermotoga lettingae TMO] Length = 450 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 22/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G+ NVGKS+L+N LV ++ A ++ PG T+ L VP L N + L+D Sbjct: 215 KVVIIGKPNVGKSTLLNTLV-KEERAIVTDIPGTTRDL-IEVP-----LMINGISFTLID 267 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G + R + + ++D V + D+ + S + +K Sbjct: 268 TAGI---RHSHDEVEKIG--VERAIKAADEGNLILFVLDATTPVDENDKKILSLIKEK-- 320 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 Y +V+ KID +E ++ + V+ S++K++GI+ L + I++++ Sbjct: 321 KYIVVINKIDATDLIDREE--------LKKILGTNTHVLTISALKKEGIQRLEEEIIKSV 372 >gi|157144555|ref|YP_001451874.1| GTP-binding protein EngA [Citrobacter koseri ATCC BAA-895] gi|166224326|sp|A8AD75|DER_CITK8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157081760|gb|ABV11438.1| hypothetical protein CKO_00275 [Citrobacter koseri ATCC BAA-895] Length = 490 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 11/153 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 198 PQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MERDER 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R K D+ +++ L V L+ID R G+ D + Sbjct: 251 EYVLIDTAG---VRKRGKVTDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLG 307 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 F+ S IV+ K D L+ ++ E + Sbjct: 308 FILNSGRSLVIVVNKWDGLTQEVKEQVKETLDF 340 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIHPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|325180040|emb|CCA14442.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1964 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKL 162 ID + Sbjct: 62 IDAV 65 >gi|325180036|emb|CCA14438.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1964 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKL 162 ID + Sbjct: 62 IDAV 65 >gi|134045348|ref|YP_001096834.1| GTP-binding protein [Methanococcus maripaludis C5] gi|132662973|gb|ABO34619.1| GTP-binding protein, HSR1-related protein [Methanococcus maripaludis C5] Length = 227 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 43/198 (21%), Positives = 85/198 (42%), Gaps = 28/198 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++ GRSNVGKS+ + I+ + R PG T + + ++ LV Sbjct: 35 PKVIVMGRSNVGKSTFVKIVTGKN--VRVGKKPGVTLKITEY----------DMGTYILV 82 Query: 90 DMPGYGYARA-PKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCR-----------HGVKQ 136 D+PG+G+ KK + I+ Y+ + ++T+ ++D + G Sbjct: 83 DLPGFGFMEGIEKKAQEKIKDQIIDYVEDNKNTIAASIHILDAKSFMDIVERWDNKGEVP 142 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH---PEVIPTSS 193 ID ++ FL++ ++ V+ K+DK+ + L++ + P +P + Sbjct: 143 IDLEMADFLEELELNPIFVVNKMDKIKNSEWDNHLDRVSETLGFLPPWRQWLDNFVPAIT 202 Query: 194 VKRKGIEVLRKAILETIN 211 GI+ ++ I + IN Sbjct: 203 RDNYGIDGIKHRINKRIN 220 >gi|297181616|gb|ADI17800.1| predicted GTPases [uncultured Sphingobacteriales bacterium HF0130_33B19] Length = 434 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 18/198 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 LR E + + P+ A GR NVGKSS+IN L+ ++ T A LN Sbjct: 159 LLRHFEEDIKMQEDDIPKFAIIGRPNVGKSSIINTLIGKEQNIVTDIAGTTRDSLNIRYT 218 Query: 74 K---DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + DFS LVD G + +N++ + + E S + C++ +ID Sbjct: 219 QFGFDFS----------LVDTAGVRKKKNVHENLEFYSVMRSIRAIEHSDV-CIH-IIDA 266 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEV 188 G + DQ +F D+ I++ K D + S TA++ E+ K I + P V Sbjct: 267 ERGFEAQDQRIFHIADRNKKGIVILVNKWDLVDKSHETAKKMEEQIKKKIAPFSDV-PIV 325 Query: 189 IPTSSVKRKGIEVLRKAI 206 ++ K++ ++ L AI Sbjct: 326 FVSALEKQRLLKGLETAI 343 >gi|94263425|ref|ZP_01287239.1| GTP-binding [delta proteobacterium MLMS-1] gi|93456261|gb|EAT06395.1| GTP-binding [delta proteobacterium MLMS-1] Length = 48 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 22/37 (59%), Positives = 26/37 (70%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILV 50 F+ V + LP PEIAF+GRSNVGKSSLIN L+ Sbjct: 12 FVDSVFALAKLPAGELPEIAFAGRSNVGKSSLINCLL 48 >gi|294637684|ref|ZP_06715962.1| ribosome-associated GTPase EngA [Edwardsiella tarda ATCC 23685] gi|291089160|gb|EFE21721.1| ribosome-associated GTPase EngA [Edwardsiella tarda ATCC 23685] Length = 496 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +IA GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 204 PIGQPIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MERDER 256 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 257 EYVLIDTAGVRKRGKVTDTVEKFS--VIKTLQAIEDANVVLLVIDARQGISDQDLSLLGF 314 Query: 145 LDKKAVSYQIVLTKIDKLS 163 + S +V+ K D LS Sbjct: 315 ILNSGRSLVVVVNKWDGLS 333 >gi|261820577|ref|YP_003258683.1| GTP-binding protein EngA [Pectobacterium wasabiae WPP163] gi|261604590|gb|ACX87076.1| ribosome-associated GTPase EngA [Pectobacterium wasabiae WPP163] Length = 495 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 13/154 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P + + Sbjct: 203 PEDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MVRDER 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 256 EYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + S IV+ K D LS QE ++ K ++ Sbjct: 314 ILNSGRSLVIVVNKWDGLS----QEVRDQVKDML 343 >gi|116052955|ref|YP_793272.1| selenocysteine-specific elongation factor [Pseudomonas aeruginosa UCBPP-PA14] gi|115588176|gb|ABJ14191.1| selenocysteine-specific elongation factor [Pseudomonas aeruginosa UCBPP-PA14] Length = 641 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +G + GK+SL+ L + R + G T L + +++L + P +D Sbjct: 3 VGTAGHIDHGKTSLLRALTGIEGDRRPAERQRGITIDLGYL----YADLGDGSPT-GFID 57 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ + L+ S + CV L++ G+ ++ + ++ + Sbjct: 58 VPGHER-------------FVHNMLAGASGIDCVLLVVAADDGLMPQTREHLAIVELLGI 104 Query: 151 SYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V LTKID++ P Q+ + ++L+ + P A + P SS +G+ LR+A+ Sbjct: 105 RRALVALTKIDRVEPQRVQQVRTQVEHLLASGPLARSPIFPLSSSTGEGVAALREAL 161 >gi|325180034|emb|CCA14436.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1953 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKL 162 ID + Sbjct: 62 IDAV 65 >gi|325180032|emb|CCA14434.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1945 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 5/64 (7%) Query: 104 VDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 +++ G RYL+E+ L ++L+D R G+ +DQ+ FL++ YQI+LTK Sbjct: 2 IETAQGGFPRYLAEKCPIEVWLLENPFVLLDARRGITTLDQEFLDFLEEMESFYQIILTK 61 Query: 159 IDKL 162 ID + Sbjct: 62 IDAV 65 >gi|73669412|ref|YP_305427.1| GTP-binding protein [Methanosarcina barkeri str. Fusaro] gi|119369213|sp|Q46B95|ENGB_METBF RecName: Full=Probable GTP-binding protein EngB gi|72396574|gb|AAZ70847.1| GTP-binding protein [Methanosarcina barkeri str. Fusaro] Length = 209 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 31/159 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPG---RTQHLNFFVPKDFSNLKNNLPAMA 87 EI F GRSNVGKSSL+ L K R PG R H+ + + Sbjct: 15 EIIFVGRSNVGKSSLLRELFGAK--VRVGKRPGVTLRPAHV-------------QVSDLL 59 Query: 88 LVDMPGYGYARAPK-KNVDSWGGLIVRYLSERST-LRCVYLLIDC--------RHGVKQ- 136 + DMPG+G+ K + D V Y+ E + ++ L+ID R K Sbjct: 60 ITDMPGFGFMSGVKDRKQDIVKDKTVHYIEENAERIKLGVLVIDSPAFPQIVDRWDSKDQ 119 Query: 137 --IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 ID ++F FL + + I K+DK+ + L++ Sbjct: 120 IPIDVEMFDFLREVGIDTIIAANKMDKVKESEYGSLLDE 158 >gi|323466383|gb|ADX70070.1| GTP-binding protein era-like protein [Lactobacillus helveticus H10] Length = 301 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + +++ K + VD Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNR---ISGIYTSDKMQV---VFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + + LS + + V +++ + + DQ + + L + V Sbjct: 64 PG---IFKPHSKLDDY--MDKASLSSLNDVDLVLFMVESEE-IGKGDQYIANLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K+D++ P ++ L E++P S+ + GIE L L TIN Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDL----LNTIN 168 >gi|296104190|ref|YP_003614336.1| GTP-binding protein EngA [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058649|gb|ADF63387.1| GTP-binding protein EngA [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 511 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 9/152 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 219 PQDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDER 271 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 272 EYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 329 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + S IV+ K D LS ++ E + Sbjct: 330 ILNSGRSLVIVVNKWDGLSNEVREQVKETLDF 361 >gi|332530165|ref|ZP_08406113.1| GTP-binding protein Der [Hylemonella gracilis ATCC 19624] gi|332040357|gb|EGI76735.1| GTP-binding protein Der [Hylemonella gracilis ATCC 19624] Length = 444 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ G T+ + + N + ++ Sbjct: 3 PVLALVGRPNVGKSTLFNRLTQTRD-AIVADYAGLTRD------RHYGNGRQGRREFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + V ++D R G+ D D+ ++L K Sbjct: 56 DTGGF----EPTAETGIYKEMANQTRQAVAEADAVIFVVDARAGLSAQDHDIANYLRK-- 109 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + VLT E +++ L Y EV+P S+ +G+ L LE Sbjct: 110 LGKPCVLT-------ANKAEGMQEGAQLAEFYELGLGEVLPVSAAHGQGLRTLVDQALEP 162 Query: 210 IN 211 +N Sbjct: 163 LN 164 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 11/177 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 A +GR NVGKS+LIN + + L + PG T+ VP + K L A + Sbjct: 181 FAVAGRPNVGKSTLINTWLGEERLI-AFDMPGTTRDA-IRVPFERQGQKFELIDTAGLRR 238 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + K +V V+ L + V LL+D GV D + ++ + + Sbjct: 239 KGRVFEAVEKFSV-------VKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRA 291 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K D + Q+ + + + A+ +I S+ KR+G+E L K++L+ Sbjct: 292 VVLAVNKWDAVDDYQRQQLQRQLETRLTFLKFANLHLI--SARKRQGLEPLWKSMLK 346 >gi|310828430|ref|YP_003960787.1| hypothetical protein ELI_2843 [Eubacterium limosum KIST612] gi|308740164|gb|ADO37824.1| hypothetical protein ELI_2843 [Eubacterium limosum KIST612] Length = 304 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 19/176 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ GR NVGKS+L+N ++ K L T+N P T++ + D + M +D Sbjct: 16 ISIIGRPNVGKSTLLNSIMGEK-LVITANKPQTTRNAIRCIHTDADS------QMVFIDT 68 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +++ + S + V L++ + DQ + LDK A Sbjct: 69 PGM---HKPKNKL---GAFMLKSAEDTISDVDVVLFLVEPEDRIGPGDQYI---LDKLAG 119 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S VL I+K+ T +E L KT ++Y T +IP S+ G++ L AI Sbjct: 120 SRTPVLLIINKID-TVPKEELLKTIAAYQDY-TFLDSIIPVSAWNGDGVQELLAAI 173 >gi|302390791|ref|YP_003826612.1| tRNA modification GTPase trmE [Thermosediminibacter oceani DSM 16646] gi|302201419|gb|ADL08989.1| tRNA modification GTPase trmE [Thermosediminibacter oceani DSM 16646] Length = 462 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 29/174 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L+ R+ A ++ PG T+ + +++ N+ N +P + +VD G Sbjct: 231 GRPNVGKSSLLNSLL-REKRAIVTDIPGTTRD----IIEEYLNI-NGIP-VKIVDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R V+ G + R L V L++D +++ D+ + + K V +V Sbjct: 283 --RETCDAVEKIG--VERALESLKEAELVLLMLDASDELREEDRAIMELVKDKFVI--VV 336 Query: 156 LTKID---KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L K D KLS +++ K P +I S+++ KGIE L++AI Sbjct: 337 LNKTDLPEKLS-------VDEVKSAFPGKP-----LIRVSALREKGIEELKEAI 378 >gi|169628762|ref|YP_001702411.1| GTP-binding protein Era [Mycobacterium abscessus ATCC 19977] gi|169240729|emb|CAM61757.1| GTP-binding protein Era homolog [Mycobacterium abscessus] Length = 304 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 20/178 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 + F GR N GKS+L N LV +K +A TSN P T+H + V ++ N + + LVD Sbjct: 11 VCFVGRPNTGKSTLTNALVGQK-VAITSNRPQTTRHTIRGIVHRE--NFQ-----IVLVD 62 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA- 149 PG P+ + +VR S + + L I G+ D+ ++ + A Sbjct: 63 TPGL---HRPRTLLGQRLNDLVR--DTYSEVDVIGLCIPADEGIGPGDKWIYEQIKLVAP 117 Query: 150 -VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + ++TKIDK+S E L L+ +++P S+V +EVL + + Sbjct: 118 RTTLIAIVTKIDKVSKERVAEQLLSVSQLV----GKEVDIVPVSAVSGAQVEVLTEVL 171 >gi|134300318|ref|YP_001113814.1| GTP-binding protein Era [Desulfotomaculum reducens MI-1] gi|134053018|gb|ABO50989.1| GTP-binding protein Era [Desulfotomaculum reducens MI-1] Length = 302 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 17/177 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A S+ P T+H K S L N M +D Sbjct: 13 VALVGRPNVGKSTLLNKLVGQK-VAIMSDKPQTTRH------KIHSVLTRNDAQMVFLDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P+ + + ++ L + L++ DQ + L Sbjct: 66 PGI---HKPRHKLGEY--MVDVALGALKEVDVALFLVEASEAPGPGDQYIAEQLKGIKTP 120 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K+D + E + + K L+ P A EVIP S++ + +E L I++ Sbjct: 121 VFLMLNKVDLIQREAVLERILQYKDLL---PFA--EVIPVSALAGENVERLIDTIIK 172 >gi|206901733|ref|YP_002250881.1| ribosome-associated GTPase EngA [Dictyoglomus thermophilum H-6-12] gi|206740836|gb|ACI19894.1| ribosome-associated GTPase EngA [Dictyoglomus thermophilum H-6-12] Length = 380 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 11/142 (7%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 AF GR N GKSSL+N L+ K+ + S PG T+ V + N +VD P Sbjct: 125 AFVGRPNSGKSSLLNALIG-KDRSIVSEIPGTTRDAVDLV------WEFNGKKYIIVDTP 177 Query: 93 GYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R P + + L VR L + ++ID GV++ ++ + +++ K S Sbjct: 178 GL---RRPARVEEGLEELSVRKTLQTIRKIDVAVMVIDLSVGVREQEKRILHYIEDKGKS 234 Query: 152 YQIVLTKIDKLSPTTAQETLEK 173 IV K D + EK Sbjct: 235 CLIVFNKTDLFPSLKERREFEK 256 >gi|289548228|ref|YP_003473216.1| ribosome-associated GTPase EngA [Thermocrinis albus DSM 14484] gi|289181845|gb|ADC89089.1| ribosome-associated GTPase EngA [Thermocrinis albus DSM 14484] Length = 430 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 28/184 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +++F GR NVGKSSLIN ++ + + S G T+ +P ++ + LVD Sbjct: 173 KVSFVGRPNVGKSSLINAIMGEEKVL-VSPVAGTTRD-AVELPFEYGGER-----FVLVD 225 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC------VYLLIDCRHGVKQIDQDVFSF 144 G R P K +G V + S +++ V L++D GV DQ + Sbjct: 226 TAG---MRRPSKV--EYG---VEFFSVGRSIKAIELSDVVCLVLDLTEGVTHQDQKIGGL 277 Query: 145 LDKKAVSYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++++ IV K+D K P+ + + + + + P V+ TS+++++G+E L Sbjct: 278 IERRYRGCVIVGNKVDLVKTPPSQLESYIRQRLHFLDFAP-----VVFTSAIQKRGVEDL 332 Query: 203 RKAI 206 K I Sbjct: 333 LKTI 336 >gi|54023403|ref|YP_117645.1| GTP-binding protein Era [Nocardia farcinica IFM 10152] gi|54014911|dbj|BAD56281.1| putative GTP-binding protein [Nocardia farcinica IFM 10152] Length = 305 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 30/183 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 + F GR N GKS+L N LV K +A TS+ P T+H + V ++ + L LVD Sbjct: 15 VCFVGRPNTGKSTLTNALVGAK-IAITSSRPQTTRHTIRGIVHREHAQL-------ILVD 66 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQI---DQDVFSFL 145 PG R L+ + L++ R T V ++ C ++I D+ + + Sbjct: 67 TPGLHRPRT----------LLGQRLNDLVRDTYSEVDVIAICIPADEKIGPGDRWIVQQV 116 Query: 146 DKKAVSYQI--VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + A + V+TKIDK+ E L L+ P A EV+P S+V+ + +EVL Sbjct: 117 KQMAPKTTLLGVVTKIDKVGRQQVAEQLLAVSELL--GPQA--EVVPVSAVRGEQVEVLV 172 Query: 204 KAI 206 I Sbjct: 173 DVI 175 >gi|227892551|ref|ZP_04010356.1| GTP-binding protein Era [Lactobacillus ultunensis DSM 16047] gi|227865672|gb|EEJ73093.1| GTP-binding protein Era [Lactobacillus ultunensis DSM 16047] Length = 301 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + +N + VD Sbjct: 11 VALIGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRN------RISGIYTSNKMQVVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + + LS + + V +++ + + DQ + L + V Sbjct: 64 PG---IFKPHSKLDDY--MDKASLSSLNDVDLVLFMVEPEE-IGKGDQYIADLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K+D++ P ++ L E++P S+ + GIE L L TIN Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDL----LGTIN 168 >gi|254414160|ref|ZP_05027927.1| tRNA modification GTPase TrmE [Microcoleus chthonoplastes PCC 7420] gi|196178835|gb|EDX73832.1| tRNA modification GTPase TrmE [Microcoleus chthonoplastes PCC 7420] Length = 460 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 228 IAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLVVGGIP-IQVLDT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G R +E + L + L+I+ G DQ++++ + + + Sbjct: 281 AGI---RETVDQVEKIGVERSRRAAEAADL--IVLVIEATAGWSSDDQEIYTQVKHRPLI 335 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K D L+P + +YP + VI + K +GIE L + ILE + Sbjct: 336 --LVINKTD-LAPADS-----------VSYPDSIDRVITAAVTKNEGIEALEQGILEAVQ 381 >gi|239828707|ref|YP_002951331.1| tRNA modification GTPase TrmE [Geobacillus sp. WCH70] gi|239809000|gb|ACS26065.1| tRNA modification GTPase TrmE [Geobacillus sp. WCH70] Length = 461 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 23/173 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ +N A ++ PG T+ V +++ N++ +P + L+D G Sbjct: 230 GRPNVGKSSLLNALVH-ENKAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLIDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L + L+++ + + D+ +F + K + + ++ Sbjct: 282 --RETEDVVERIGVERSRQMLKEADL--ILLVLNYHEPLTEEDEKLFEMV--KGMDFIVI 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + K D P +++ K L P +I TS ++ KGIE L AI E Sbjct: 336 VNKTD--LPKNID--MDRVKQLADGRP-----IITTSLLQEKGIEDLETAISE 379 >gi|315604800|ref|ZP_07879859.1| GTP-binding protein Era [Actinomyces sp. oral taxon 180 str. F0310] gi|315313471|gb|EFU61529.1| GTP-binding protein Era [Actinomyces sp. oral taxon 180 str. F0310] Length = 402 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 29/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKS+L N LV K +A TS P T+H + V D L LVD Sbjct: 110 VSIVGRPNVGKSTLTNALVGAK-IAITSGRPETTRHNIRGIVHGDNYQL-------VLVD 161 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQID-QDVFSFLDK 147 PGY R L+ + L++ R L V +++ C ++I D F + Sbjct: 162 TPGYHRPRT----------LLGKRLNDMVREALSEVDVVLFCLPADQRIGPGDQFIAREL 211 Query: 148 KAVSYQI--VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++V I V TK D + A+E + K I ++P SSV+ KGI+ LR Sbjct: 212 RSVKRPIIAVATKCDAV----ARERVMKHLLAIEKL-GEWAAIVPVSSVEGKGIDHLRDV 266 Query: 206 ILETI 210 + +T+ Sbjct: 267 LAQTV 271 >gi|27364935|ref|NP_760463.1| GTPase Era [Vibrio vulnificus CMCP6] gi|37681014|ref|NP_935623.1| GTP-binding protein Era [Vibrio vulnificus YJ016] gi|320155321|ref|YP_004187700.1| GTP-binding protein Era [Vibrio vulnificus MO6-24/O] gi|31340056|sp|Q8DC75|ERA_VIBVU RecName: Full=GTPase Era gi|61212428|sp|Q7MHN9|ERA_VIBVY RecName: Full=GTPase Era gi|27361081|gb|AAO09990.1| GTP-binding protein Era [Vibrio vulnificus CMCP6] gi|37199764|dbj|BAC95594.1| GTP-binding protein Era [Vibrio vulnificus YJ016] gi|319930633|gb|ADV85497.1| GTP-binding protein Era [Vibrio vulnificus MO6-24/O] Length = 320 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D + A+ VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD-----GDYQAI-YVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H D+ V + L K Sbjct: 82 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTND-DEMVLNKLQKANF 135 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D + Q +E +K + N+ +V+P S+ + K I+VLRK + Sbjct: 136 PVVLCVNKVDNVQDRNEVMQHMMEMSKKM--NF----VDVVPISAKQGKNIDVLRKHV 187 >gi|169331621|ref|ZP_02860814.1| hypothetical protein ANASTE_00005 [Anaerofustis stercorihominis DSM 17244] gi|169259683|gb|EDS73649.1| hypothetical protein ANASTE_00005 [Anaerofustis stercorihominis DSM 17244] Length = 302 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 27/180 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK----NNLPAMA 87 I+ GR+NVGKS+L+N+L+ +K ++ SN P T++ N++ M Sbjct: 10 ISIVGRTNVGKSTLLNLLLGQK-ISIVSNRPQTTRN----------NIRCIRTTGTSQMV 58 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D PG+ PK + + +V E + + L++ + + D+ + L Sbjct: 59 FIDTPGF---HKPKSKLSDY---MVEVAGESYKEVDVILFLVEEDTTIGKGDEFLIEKLK 112 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K+ +V+ KIDK+ T +E L K K L Y E++P S++K + I L + I Sbjct: 113 KEKTPVILVINKIDKI---TKEEILGKIK-LYEKYDFIK-EIVPISAMKGENINELVEVI 167 >gi|150400451|ref|YP_001324217.1| GTP-binding protein [Methanococcus aeolicus Nankai-3] gi|166225964|sp|A6USY3|ENGB_META3 RecName: Full=Probable GTP-binding protein EngB gi|150013154|gb|ABR55605.1| GTP-binding protein HSR1-related [Methanococcus aeolicus Nankai-3] Length = 227 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 25/157 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+I GRSNVGKS+L+ L+ +K++ R PG T +N + D N LV Sbjct: 32 PQIIVVGRSNVGKSTLVR-LITKKDV-RVGKKPGVTLKINKY---DVGNF-------ILV 79 Query: 90 DMPGYGYARAPKKNV-DSWGGLIVRYLSE-RSTLRCVYLLIDCRH--GVKQ--------- 136 D+PG+G+ ++ V + IV+Y+ + + + +LID + G+ + Sbjct: 80 DLPGFGFMTGLEEKVQNKIKKEIVQYIEDNKDQIVGSIILIDVKAFPGIVERWDSKDEIP 139 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 ID ++F FL++ ++ I + K+DK+ +TL+K Sbjct: 140 IDIEMFEFLEELELNPSIFINKMDKIKKNDQDKTLDK 176 >gi|254975750|ref|ZP_05272222.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-66c26] gi|255093137|ref|ZP_05322615.1| putative ATP/GTP-binding protein [Clostridium difficile CIP 107932] gi|255314879|ref|ZP_05356462.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-76w55] gi|255517553|ref|ZP_05385229.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-97b34] gi|255650664|ref|ZP_05397566.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-37x79] gi|260683753|ref|YP_003215038.1| putative ATP/GTP-binding protein [Clostridium difficile CD196] gi|260687413|ref|YP_003218547.1| putative ATP/GTP-binding protein [Clostridium difficile R20291] gi|306520592|ref|ZP_07406939.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-32g58] gi|260209916|emb|CBA63870.1| putative ATP/GTP-binding protein [Clostridium difficile CD196] gi|260213430|emb|CBE05089.1| putative ATP/GTP-binding protein [Clostridium difficile R20291] Length = 402 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 26/189 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ I G+ N GKSS+IN + N+ + A S+ G T F P + LP Sbjct: 7 PQSVRVHIGLFGKRNAGKSSIINAITNQ-SAAIVSDIAGTTTD-PVFRPMEI------LP 58 Query: 85 A--MALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L+D G +V G L I + L L++DC+ G+ Q D + Sbjct: 59 IGPCVLIDTAGL-------DDVGELGELRIGKSLDVLEKTDIALLVVDCQIGISQEDLSL 111 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + K + + ++L KID + E L TK ++ V+ SS + GIE Sbjct: 112 IEKFNDKNIPHILILNKIDTIK--NQSEILNLTKNKVK------CPVVSVSSTDKIGIEN 163 Query: 202 LRKAILETI 210 L+ I++ + Sbjct: 164 LKNEIIKVL 172 >gi|121535817|ref|ZP_01667617.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] gi|121305589|gb|EAX46531.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] Length = 440 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 18/148 (12%) Query: 21 IGLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFV 72 I LLP+ E +AF GR NVGKSSL+N L+ + + S+ PG T+ ++ + Sbjct: 161 IELLPQTEDAEEDDDVIKVAFIGRPNVGKSSLVNALLGEERVI-VSDIPGTTRDAIDTYF 219 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 KD + L+D G + V+ + ++R L V ++ID Sbjct: 220 EKDGTKF-------ILIDTAGMRRKARINQPVERYS--VIRSLRAVERADVVLVVIDAVD 270 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKID 160 GV + D+ + + + IV+ K D Sbjct: 271 GVTEQDKKIAGYAHEAGRGIIIVVNKWD 298 >gi|284161711|ref|YP_003400334.1| GTP-binding protein HSR1-related protein [Archaeoglobus profundus DSM 5631] gi|284011708|gb|ADB57661.1| GTP-binding protein HSR1-related protein [Archaeoglobus profundus DSM 5631] Length = 197 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F+GRSNVGKS+L + L K R PG T N KD + + D Sbjct: 3 EIVFAGRSNVGKSTLFSQLFGVK--VRRGKRPGTTIKPNQIKFKD----------LLVTD 50 Query: 91 MPGYGYARAPKKNVDSW-GGLIVRYLSERSTLRCVYL--LIDC-----------RHGVKQ 136 +PG+GY K + IV Y+ E++ R + ++D R G Sbjct: 51 LPGFGYISGVDKEFNERVKDFIVEYI-EKNAERIILAVQVVDGKSFLEIAERWERRGYIP 109 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLS 163 ++ ++F FL++ + + K+DK+ Sbjct: 110 VEVEMFEFLNEVCSKVFLAVNKMDKVD 136 >gi|126699770|ref|YP_001088667.1| putative ATP/GTP-binding protein [Clostridium difficile 630] gi|255101290|ref|ZP_05330267.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-63q42] gi|255307166|ref|ZP_05351337.1| putative ATP/GTP-binding protein [Clostridium difficile ATCC 43255] gi|115251207|emb|CAJ69038.1| putative ATP/GTP-binding protein [Clostridium difficile] Length = 402 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 26/189 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ I G+ N GKSS+IN + N+ + A S+ G T F P + LP Sbjct: 7 PQSVRVHIGLFGKRNAGKSSIINAITNQ-SAAIVSDIAGTTTD-PVFRPMEI------LP 58 Query: 85 A--MALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L+D G +V G L I + L L++DC+ G+ Q D + Sbjct: 59 IGPCVLIDTAGL-------DDVGELGELRIGKSLDVLEKTDIALLVVDCQIGISQEDLSL 111 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + K + + ++L KID + E L TK ++ V+ SS + GIE Sbjct: 112 IEKFNDKNIPHILILNKIDTIK--NQSEILNLTKNKVK------CPVVSVSSTDKIGIEN 163 Query: 202 LRKAILETI 210 L+ I++ + Sbjct: 164 LKNEIIKVL 172 >gi|40062766|gb|AAR37660.1| GTP-binding protein, Era/TrmE family [uncultured marine bacterium 439] Length = 463 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 13/157 (8%) Query: 32 IAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +A GR NVGKS+LIN IL + LA + PG T+ F+P L+D Sbjct: 179 VAVLGRPNVGKSTLINRILGEERVLA--IDIPGTTRD-TIFIP-----FTREGEQYTLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R+ ++ V+ + I++ + V L++D GV + D + + K Sbjct: 231 TAGIRRKRSVEEKVEKFS--IIKAIEALEDSHVVILVLDAHEGVTEQDATLLGMIADKGR 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEK--TKYLIRNYPTAH 185 + IV+ K D L E K K +Y + H Sbjct: 289 ALLIVINKWDGLDDYQKSEVKRKLDVKLSFISYASVH 325 >gi|91772360|ref|YP_565052.1| GTP-binding protein [Methanococcoides burtonii DSM 6242] gi|91711375|gb|ABE51302.1| GTP-binding protein [Methanococcoides burtonii DSM 6242] Length = 207 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 25/155 (16%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI SGRSNVGKSS+I L ++ + PG T + L M + D Sbjct: 13 EIIISGRSNVGKSSIIRELTGKQ--VKVGKRPGVTLKPTQIL----------LSDMLITD 60 Query: 91 MPGYGYARAPK-KNVDSWGGLIVRYLSERST-LRCVYLLIDCRHGVKQ-----------I 137 +PG+G+ K + D IVRY+ + ++ ++ D V I Sbjct: 61 LPGFGFMSGVKDRKQDIVKDQIVRYIENNADRIKIAVIVTDSVSFVDVVERWESRNEIPI 120 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE 172 D ++F F ++ I + K+D++ E L+ Sbjct: 121 DIEIFDFFNELGFDTIIAVNKMDRIKDIHHDERLD 155 >gi|325187572|emb|CCA22109.1| ras family GTPase putative [Albugo laibachii Nc14] gi|325188870|emb|CCA23399.1| ras family GTPase putative [Albugo laibachii Nc14] Length = 535 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 20/178 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L N L + A N PG T+ F P + L+ ++D Sbjct: 53 LALVGRTNVGKSTLFNRLTKSRR-AIVHNVPGTTRDRR-FAPGRIAGLE-----FEVIDT 105 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G AP +++ G++ + ++ LID R GV +D +L K+ S Sbjct: 106 G--GLEDAPSGSLEE--GMLSQTKIAVHEADLIFFLIDGRQGVTPVDSYFARWLRKENAS 161 Query: 152 YQI--VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 I V K++ P Q++L + Y E IP S+ +G+ +L A++ Sbjct: 162 APIHAVANKLEGY-PDRWQDSLNEC------YQLGMGEAIPISAEHGEGVSLLLDALI 212 >gi|81300391|ref|YP_400599.1| tRNA modification GTPase TrmE [Synechococcus elongatus PCC 7942] gi|93141330|sp|Q8KPU2|MNME_SYNE7 RecName: Full=tRNA modification GTPase mnmE gi|81169272|gb|ABB57612.1| tRNA modification GTPase trmE [Synechococcus elongatus PCC 7942] Length = 462 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N +R + A ++ PG T+ L + + +P L D Sbjct: 226 IAIVGRPNVGKSSLLNAW-SRCDRAIVTDLPGTTRDL-----VESQLIVGGIPVQVL-DT 278 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G R ++ + L V L ID G DQ ++ + + + Sbjct: 279 AGI---RETSDQVEQIGVERSRRAAQSADL--VLLTIDASAGWSAEDQTIWEAVSDRPIL 333 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K D+LS E ++ I ++ T++ +++GIE L AIL + Sbjct: 334 --LVINKRDRLS--------EAERHAIALPQQEFKAIVWTAAAQQQGIEDLEAAILAAVG 383 >gi|146312646|ref|YP_001177720.1| GTP-binding protein EngA [Enterobacter sp. 638] gi|166920100|sp|A4WD89|DER_ENT38 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145319522|gb|ABP61669.1| small GTP-binding protein [Enterobacter sp. 638] Length = 490 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 9/152 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 198 PQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MQRDER 250 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 251 EYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSLLGF 308 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + S IV+ K D LS ++ E + Sbjct: 309 ILNSGRSLVIVVNKWDGLSNDVREQVKEMLDF 340 >gi|238854658|ref|ZP_04644988.1| GTP-binding protein Era [Lactobacillus jensenii 269-3] gi|260664399|ref|ZP_05865251.1| GTP-binding protein Era [Lactobacillus jensenii SJ-7A-US] gi|282932951|ref|ZP_06338348.1| GTP-binding protein Era [Lactobacillus jensenii 208-1] gi|313472197|ref|ZP_07812689.1| GTP-binding protein Era [Lactobacillus jensenii 1153] gi|238832448|gb|EEQ24755.1| GTP-binding protein Era [Lactobacillus jensenii 269-3] gi|239529577|gb|EEQ68578.1| GTP-binding protein Era [Lactobacillus jensenii 1153] gi|260561464|gb|EEX27436.1| GTP-binding protein Era [Lactobacillus jensenii SJ-7A-US] gi|281302986|gb|EFA95191.1| GTP-binding protein Era [Lactobacillus jensenii 208-1] Length = 302 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 18/171 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K + TSN P T++ + F+ +NL A+ VD Sbjct: 12 VALIGRPNVGKSTLMNHLIGQK-VVITSNKPQTTRNK---ISGIFTT--DNLQAV-FVDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK +D + + LS + + V+ +++ V + D+ + L K Sbjct: 65 PG---IHKPKNKLDDY--MDKASLSSLNDVDLVFFMVEPEK-VGKGDEYIADLLSKVKAP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ KID++ P +E + L + E++P S+ +E L Sbjct: 119 VFLIINKIDQVHPDALLPVIESYQKLGK-----FAEIVPISATNGNNMEDL 164 >gi|251788752|ref|YP_003003473.1| GTP-binding protein EngA [Dickeya zeae Ech1591] gi|247537373|gb|ACT05994.1| small GTP-binding protein [Dickeya zeae Ech1591] Length = 497 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 15/148 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + L Sbjct: 209 PIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRD-SIYIP-----MERDGRDYVL 261 Query: 89 VDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G R K D+ +++ L V L+ID R G+ D + F+ Sbjct: 262 IDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQDLSLLGFILN 318 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTK 175 S IV+ K D LS QE E+ K Sbjct: 319 SGRSLVIVVNKWDGLS----QEVKEQVK 342 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + N ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGRAEVEGN------EFIII 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G +D + ++E+S L V L+D R G+ D + Sbjct: 56 DTGG----------IDGTEDGVETRMAEQSLLAIEEADIVLFLVDARDGLMPADHAIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V KID + T Y EV P ++ +G+ L + Sbjct: 106 LRTREKDTFLVANKIDGIDIDTGTADF---------YSLGLGEVYPIAASHGRGVTALLE 156 Query: 205 AIL 207 +L Sbjct: 157 KVL 159 >gi|227878694|ref|ZP_03996608.1| GTP-binding protein [Lactobacillus crispatus JV-V01] gi|256843288|ref|ZP_05548776.1| GTP-binding protein Era [Lactobacillus crispatus 125-2-CHN] gi|256850355|ref|ZP_05555783.1| GTP-binding protein Era [Lactobacillus crispatus MV-1A-US] gi|262046497|ref|ZP_06019459.1| GTP-binding protein Era [Lactobacillus crispatus MV-3A-US] gi|293380657|ref|ZP_06626708.1| GTP-binding protein Era [Lactobacillus crispatus 214-1] gi|312978179|ref|ZP_07789923.1| GTP-binding protein Era [Lactobacillus crispatus CTV-05] gi|227861709|gb|EEJ69314.1| GTP-binding protein [Lactobacillus crispatus JV-V01] gi|256614708|gb|EEU19909.1| GTP-binding protein Era [Lactobacillus crispatus 125-2-CHN] gi|256712752|gb|EEU27745.1| GTP-binding protein Era [Lactobacillus crispatus MV-1A-US] gi|260573368|gb|EEX29926.1| GTP-binding protein Era [Lactobacillus crispatus MV-3A-US] gi|290922785|gb|EFD99736.1| GTP-binding protein Era [Lactobacillus crispatus 214-1] gi|310894897|gb|EFQ43967.1| GTP-binding protein Era [Lactobacillus crispatus CTV-05] Length = 300 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 22/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N LV +K +A TSN P T++ + + + V Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYTSDEMQ--------VVFV 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG P +D + + +S + + V +++ K DQ + + L + Sbjct: 62 DTPG---IFKPHSKLDDY--MDKASVSSLNDVDLVLFMVEPEEMGKG-DQYIANLLKEVK 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V +V+ K+D++ P ++ L E++P S+ + GIE L K I E Sbjct: 116 VPVLLVINKVDEIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDLLKTIKE 169 >gi|304316658|ref|YP_003851803.1| GTP-binding protein Era [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778160|gb|ADL68719.1| GTP-binding protein Era [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 299 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 31/182 (17%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALVD 90 A GR+NVGKS+L+N L+ K +A TS+ P T++ +D+ + +D Sbjct: 9 ALIGRTNVGKSTLLNALLEEK-VAITSDKPQTTRNTIQGILTGEDYQ--------VVFID 59 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI---DQDVFSFLDK 147 PG PK + + S + TL V L+I ++ D+ + L Sbjct: 60 TPG---IHKPKHKLSE-----IMIESVKKTLTEVDLIIYMVEPDAEVGPGDEYIIEHLIS 111 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVLRKA 205 +V+ KID T ET++KT I N+ + +++P S++K K I++L+ Sbjct: 112 IDTPVILVINKID----TVPHETVDKT---IENFKAQYNFKDILPISALKNKNIDLLKHT 164 Query: 206 IL 207 I+ Sbjct: 165 IV 166 >gi|166367612|ref|YP_001659885.1| tRNA modification GTPase TrmE [Microcystis aeruginosa NIES-843] gi|205415798|sp|B0JVV0|MNME_MICAN RecName: Full=tRNA modification GTPase mnmE gi|166089985|dbj|BAG04693.1| thiophen and furan oxidation protein [Microcystis aeruginosa NIES-843] Length = 457 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G L ++G ++A GR NVGKSSL+N +R + A ++ PG T+ + + + Sbjct: 214 ERGELLRSGL-KVAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDI-----VESQLV 266 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 +P L D G R+ V+ G R + + L V L + G Q D+ Sbjct: 267 VAGIPVQVL-DTAGI---RSASDRVEQIGVERSRQTARSADL--VLLTVSAESGWTQEDE 320 Query: 140 DVF-SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +++ S D++ + +V+ KID +P T YP V+ S+ + +G Sbjct: 321 EIYRSVSDRRLI---LVINKIDLANPETV------------IYPAEIKRVVKLSAAQNQG 365 Query: 199 IEVLRKAILETIN 211 IE L K+++ + Sbjct: 366 IEDLEKSLINAVQ 378 >gi|26987593|ref|NP_743018.1| GTP-binding protein EngA [Pseudomonas putida KT2440] gi|37999649|sp|Q88PJ3|DER_PSEPK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|24982270|gb|AAN66482.1|AE016277_1 GTP-binding protein EngA [Pseudomonas putida KT2440] Length = 487 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + + + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRD------RQYGDASWQGRSFILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFSF 144 D G D G + ++E+S + V L+D R G+ DQ + Sbjct: 56 DTGGI--------TGDEVG--MDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K+ + +V KID + P A+ P IP + + +GI L + Sbjct: 106 LRKRNKAAILVANKIDNIDPDVARAEFS---------PMGMGNAIPVAGSQGRGINALME 156 Query: 205 AIL 207 A+L Sbjct: 157 AVL 159 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + + PG T+ + ++P + K Sbjct: 186 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDEPGTTRD-SIYIPFERDGEKYT 243 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 A V G + K +V V+ L V ++D R GV D ++ Sbjct: 244 FIDTAGVRKRGKIHEEVEKFSV-------VKTLQAIKDANVVIFVMDAREGVVDHDLNLL 296 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D + P Sbjct: 297 GFALEAGRAIVIALNKWDGMEP 318 >gi|254478023|ref|ZP_05091407.1| tRNA modification GTPase TrmE [Carboxydibrachium pacificum DSM 12653] gi|214036027|gb|EEB76717.1| tRNA modification GTPase TrmE [Carboxydibrachium pacificum DSM 12653] Length = 460 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 226 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYLNVK-GIP-IRLIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R V +ID + + D ++F L K + + Sbjct: 279 GI---RDTDELVEKIG--VERSKEVLGEADLVLFVIDASRELSKEDYEIFDILTGKNIIF 333 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID L +E L RN T ++ S+VK+ G+E L + I Sbjct: 334 --VLNKID-LPKKIDEEEL-------RNL-TKDGIIVEVSTVKKIGLEKLEETI 376 >gi|253682586|ref|ZP_04863383.1| ribosome-associated GTPase EngA [Clostridium botulinum D str. 1873] gi|253562298|gb|EES91750.1| ribosome-associated GTPase EngA [Clostridium botulinum D str. 1873] Length = 438 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 15/169 (8%) Query: 32 IAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKSSLIN IL K++ SN PG T+ ++ ++ ++ AL+ Sbjct: 179 IAMVGRPNVGKSSLINRILGEEKHI--VSNIPGTTRDSVDSYIEREEGKF-------ALI 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ V+ + VR ++ L++D G+ + D+ + + + Sbjct: 230 DTAGLRRKSKIKEQVERYSA--VRTIASIENADVCILMLDAEQGIAEQDEKIIGYAHELN 287 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + +++ K D + T + +K +Y + P A I + +R Sbjct: 288 KAIIVIVNKWDLIEKDDKTMKNFKDKLRYELSFLPYASFLFISAKTGQR 336 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 28/171 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L ++ +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-IAIVDDMPGVTRD-RIYAQAEWLNNK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G P+ +IV + ++ + V ++D + G+ D++V Sbjct: 55 IIDTGGI----EPESE-----DVIVAQMRRQAQMAIEMADVVLFIVDGKQGLADADREVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K S + + KID+ L+ Y N P I S Sbjct: 106 QMLRKANKSIVLAVNKIDR-------RQLDDNIYEFYNLGLGDPMAISASQ 149 >gi|39997324|ref|NP_953275.1| GTP-binding protein Era [Geobacter sulfurreducens PCA] gi|39984215|gb|AAR35602.1| GTP-binding protein Era [Geobacter sulfurreducens PCA] gi|298506261|gb|ADI84984.1| GTP-binding protein Era [Geobacter sulfurreducens KN400] Length = 299 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 ++ GR NVGKS+L+N ++ K + TS+ P T++ + +NLP + + Sbjct: 12 VSIIGRPNVGKSTLLNRILGEK-IVITSDKPQTTRNRIQGI--------HNLPGAQIVFI 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG +AR+ ++ LS + V LL++ ++++ L Sbjct: 63 DTPGIHHARSRLNKF-----MVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPSVN 117 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +V+ KID + P E L L +P EV+P S+ + +E L + + +T Sbjct: 118 VPVFLVVNKIDLIDPDILAERLTAYAEL---FP--FREVVPVSAETGENVERLVEVVRDT 172 Query: 210 I 210 + Sbjct: 173 L 173 >gi|293373216|ref|ZP_06619578.1| small GTP-binding protein domain protein [Bacteroides ovatus SD CMC 3f] gi|292631864|gb|EFF50480.1| small GTP-binding protein domain protein [Bacteroides ovatus SD CMC 3f] Length = 395 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 31/190 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A IAF GR N GKSSLIN L ++ A S+ PG T L V K ++ P Sbjct: 7 PSASRLHIAFFGRRNSGKSSLINALTG-QDTALVSDTPGTTTDL---VSKAM-EIQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I R L LL C +++ Sbjct: 62 CL-FIDTPGF----------DDEGELGELRISRTLKAIEKTDIALLL--CGDTFSH-EKE 107 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L +K + VL KID +E + I P +I S+ ++ GIE Sbjct: 108 MLALLKEKNIPVIPVLNKID------IRENSDSLATYIEEECKIRPLLI--SAKEKTGIE 159 Query: 201 VLRKAILETI 210 +R+AILE + Sbjct: 160 QIRQAILEKL 169 >gi|217077570|ref|YP_002335288.1| small GTP-binding protein domain protein [Thermosipho africanus TCF52B] gi|217037425|gb|ACJ75947.1| small GTP-binding protein domain protein [Thermosipho africanus TCF52B] Length = 399 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 32/173 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA +GR NVGKSS +N L+ ++++ SN G T P S + + + L+D Sbjct: 11 IAITGRRNVGKSSFMNALIG-QDVSIVSNVAGTTTD-----PVFKSMELSPIGPVTLIDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE-RSTL---RCVYLLIDCRHGVKQIDQDVFSFLDK 147 PG +D G L + + + + TL C L++D + K+ + + + Sbjct: 65 PG----------LDDIGELGQKRIEKAKKTLYRADCGILIVDSQP--KEYEHQIVEIFKQ 112 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + Y IV+ KID ++ +ET +K N P ++ S++K+ G E Sbjct: 113 LEIPYIIVINKIDTINSDEVEETYKKF-----NVP-----IVKVSALKKIGFE 155 >gi|332992293|gb|AEF02348.1| GTP-binding protein Der [Alteromonas sp. SN2] Length = 481 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + F+P ++ + L Sbjct: 193 PIKLAIVGKPNVGKSTLTNRILGEERVV-VFDLPGTTRD-SVFIP-----MERDEREYIL 245 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G R + V+ + IV+ L V ++ID R G+ D + F+ Sbjct: 246 IDTAGVRKRRKVNEAVEKFS--IVKTLQAIDEANVVLMIIDAREGITDQDLSLLGFVLNS 303 Query: 149 AVSYQIVLTKIDKLS 163 S I + K D LS Sbjct: 304 GRSLVIAVNKWDGLS 318 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 12/134 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L N ++ A ++ PG T+ + + K +V Sbjct: 3 PVVALVGRPNVGKSTLFNRLTNTRD-ALVADYPGLTRD------RKYGQAKFEQRQFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ +D+ + + L V LL+D R G+ DQ + + + Sbjct: 56 DTGGI---TGDEEGIDAE--MAQQSLLAIEEADVVLLLVDARAGLLPADQGIADHIRRLN 110 Query: 150 VSYQIVLTKIDKLS 163 +V K+D + Sbjct: 111 KKVFVVANKVDGID 124 >gi|313497226|gb|ADR58592.1| EngA [Pseudomonas putida BIRD-1] Length = 487 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + + + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRD------RQYGDASWQGRSFILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFSF 144 D G D G + ++E+S + V L+D R G+ DQ + Sbjct: 56 DTGGI--------TGDEVG--MDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K+ + +V KID + P A+ P IP + + +GI L + Sbjct: 106 LRKRNKAAILVANKIDNIDPDVARAEFS---------PMGMGNAIPVAGSQGRGINALME 156 Query: 205 AIL 207 A+L Sbjct: 157 AVL 159 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + + PG T+ + ++P + + Sbjct: 186 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDEPGTTRD-SIYIP-----FERD 238 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 296 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D + P Sbjct: 297 GFALEAGRAIVIALNKWDGMEP 318 >gi|148546131|ref|YP_001266233.1| GTP-binding protein EngA [Pseudomonas putida F1] gi|166225843|sp|A5VYT9|DER_PSEP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|148510189|gb|ABQ77049.1| small GTP-binding protein [Pseudomonas putida F1] Length = 487 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 74/183 (40%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + + + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRD------RQYGDASWQGRSFILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFSF 144 D G D G + ++E+S + V L+D R G+ DQ + Sbjct: 56 DTGGI--------TGDEVG--MDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K+ + +V KID + P A+ P IP + + +GI L + Sbjct: 106 LRKRNKAAILVANKIDNIDPDVARAEFS---------PMGMGNAIPVAGSQGRGISALME 156 Query: 205 AIL 207 A+L Sbjct: 157 AVL 159 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + + PG T+ + ++P + + Sbjct: 186 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDEPGTTRD-SIYIP-----FERD 238 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 239 GDKYTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 296 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D + P Sbjct: 297 GFALEAGRAIVIALNKWDGMEP 318 >gi|309806580|ref|ZP_07700577.1| ribosome biogenesis GTPase Era [Lactobacillus iners LactinV 03V1-b] gi|308167000|gb|EFO69182.1| ribosome biogenesis GTPase Era [Lactobacillus iners LactinV 03V1-b] Length = 300 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 18/177 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV K +A SN P T++ K N+ + +D Sbjct: 11 VALVGRPNVGKSTLLNYLVGEK-VAIMSNQPQTTRN------KISGIYTNDNEQIIFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK N+D + + S + + V ++D D + L A Sbjct: 64 PG---IHKPKNNLDDF--MDKSSYSALNDVEAVLFMVDPEPAGNG-DMFIIDLLKNVACP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ KID + P ++ L++ E+IP S+ + I+ L K +++ Sbjct: 118 VFLIINKIDTVHPDKLLPIIDSYNKLVK-----FAEIIPISARQGNNIDDLIKTLVK 169 >gi|294625013|ref|ZP_06703663.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666614|ref|ZP_06731853.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600688|gb|EFF44775.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603634|gb|EFF47046.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 465 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + L P + +V Sbjct: 3 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR----LDEQQPFI-VV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + R + + L V ++D R G +D ++ ++L K A Sbjct: 57 DTGGIA---GDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ KID T + + + +V+ S+ R+GI+ L Sbjct: 112 RPTVLVINKIDGTDEETVRSEFARYGF---------SDVVALSAAHRQGIDEL 155 >gi|297618669|ref|YP_003706774.1| HSR1-like GTP-binding protein [Methanococcus voltae A3] gi|297377646|gb|ADI35801.1| GTP-binding protein HSR1-related protein [Methanococcus voltae A3] Length = 325 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 24/156 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+I GRSNVGKS+ + + K + R PG T + + D N LV Sbjct: 114 PKIIVMGRSNVGKSTFVKAMAADKTI-RIGKKPGVTLKITEY---DMGNY-------YLV 162 Query: 90 DMPGYGYARA-PKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVK-----------Q 136 D+PG+G+ +K + IV+Y+ + + T+ ++D + V+ Sbjct: 163 DLPGFGFMEGIDQKGQEEIKDNIVKYVEDNQKTIATAIQILDAKSFVEIVERWEETRELP 222 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE 172 ID ++ FL++ + V+ K+DK+ E L+ Sbjct: 223 IDLEMADFLEELDLKPIYVINKMDKIKNAQWDEELD 258 >gi|158334891|ref|YP_001516063.1| tRNA modification GTPase TrmE [Acaryochloris marina MBIC11017] gi|205829048|sp|B0CBB0|MNME_ACAM1 RecName: Full=tRNA modification GTPase mnmE gi|158305132|gb|ABW26749.1| tRNA modification GTPase TrmE [Acaryochloris marina MBIC11017] Length = 455 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 28/181 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N R + A ++ PG T+ + + + +P + ++D Sbjct: 223 VAIIGRPNVGKSSLLNAWC-RCDRAIVTDLPGTTRDV-----VESQLVVGGIP-IQVLDT 275 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKKAV 150 G R + V+ G + R + V L ID G DQ ++ +F D + Sbjct: 276 AGI---RETEDQVEQIG--VTRSHQAAQSADLVLLTIDASVGWTSDDQQLYQAFQDLPLI 330 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ K+D L P QE + YP A +V+ T + + +GI L AILET+ Sbjct: 331 ---LIVNKVD-LVP---QEQV--------VYPEAIAQVVSTIAAQNQGISELETAILETV 375 Query: 211 N 211 Sbjct: 376 Q 376 >gi|255656142|ref|ZP_05401551.1| putative ATP/GTP-binding protein [Clostridium difficile QCD-23m63] gi|296450425|ref|ZP_06892181.1| GTP-binding protein [Clostridium difficile NAP08] gi|296879452|ref|ZP_06903446.1| GTP-binding protein [Clostridium difficile NAP07] gi|296260686|gb|EFH07525.1| GTP-binding protein [Clostridium difficile NAP08] gi|296429598|gb|EFH15451.1| GTP-binding protein [Clostridium difficile NAP07] Length = 402 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 26/189 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ I G+ N GKSS+IN + N+ + A S+ G T F P + LP Sbjct: 7 PQSIRVHIGLFGKRNAGKSSIINAITNQ-SAAIVSDIAGTTTD-PVFRPMEI------LP 58 Query: 85 A--MALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L+D G +V G L I + L L++DC+ G+ Q D + Sbjct: 59 IGPCVLIDTAGL-------DDVGKLGELRISKSLDVLEKTDIALLVVDCQIGISQEDLSL 111 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + K + + ++L KID + + L K K V+ SS + GIE Sbjct: 112 IEKFNDKNIPHILILNKIDTIKNQSEILNLAKNK--------VKCPVVSVSSTDKIGIEN 163 Query: 202 LRKAILETI 210 L+ I+ + Sbjct: 164 LKNEIIRVL 172 >gi|332305588|ref|YP_004433439.1| ribosome-associated GTPase EngA [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172917|gb|AEE22171.1| ribosome-associated GTPase EngA [Glaciecola agarilytica 4H-3-7+YE-5] Length = 482 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A P ++A G+ NVGKS+L N ++ + + + PG T+ + F+P ++ + Sbjct: 192 ASPIKLAIVGKPNVGKSTLTNRILGEERVV-VYDQPGTTRD-SIFIP-----MERDGREY 244 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G R+ + V+ + IV+ L V L+ID + G+ D + F+ Sbjct: 245 VLIDTAGVRRRRSISEAVEKFS--IVKTLQAIEEANVVLLVIDAQEGITDQDLSLLGFVL 302 Query: 147 KKAVSYQIVLTKIDKLSPTTAQE 169 S + + K D L E Sbjct: 303 NSGRSLVLAVNKWDGLDKDVKDE 325 >gi|325915367|ref|ZP_08177684.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Xanthomonas vesicatoria ATCC 35937] gi|325538414|gb|EGD10093.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Xanthomonas vesicatoria ATCC 35937] Length = 465 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 20/177 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + L P + +V Sbjct: 3 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR----LDEQQPFI-VV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + R + + L V ++D R G +D ++ ++L K A Sbjct: 57 DTGGIA---GDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KID T + + + +V+ S+ R+GI+ L + + Sbjct: 112 RPTVLVINKIDGTDEETVRSEFARYGF---------SDVVALSAAHRQGIDELLEEV 159 >gi|237713807|ref|ZP_04544288.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262409286|ref|ZP_06085829.1| GTP-binding protein Era [Bacteroides sp. 2_1_22] gi|294644703|ref|ZP_06722452.1| small GTP-binding protein domain protein [Bacteroides ovatus SD CC 2a] gi|294805936|ref|ZP_06764803.1| small GTP-binding protein domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229446254|gb|EEO52045.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262352738|gb|EEZ01835.1| GTP-binding protein Era [Bacteroides sp. 2_1_22] gi|292639966|gb|EFF58235.1| small GTP-binding protein domain protein [Bacteroides ovatus SD CC 2a] gi|294446818|gb|EFG15418.1| small GTP-binding protein domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 396 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 80/190 (42%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I GR N GKSSLIN L ++ A SN PG T L V K ++ P Sbjct: 7 PNANRLHITLFGRRNSGKSSLINALTG-QDTALVSNTPGTTTDL---VSKAM-EIQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I R L LL C +++ Sbjct: 62 CL-FIDTPGF----------DDEGELGELRISRTLKAIEKTDIALLL--CEDTTFFHEKE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L +K + VL KID +E + I P +I S+ ++ GIE Sbjct: 109 ILALLKEKNIPVIPVLNKID------IRENSDHLATYIEEQCKISPLLI--SAKEKIGIE 160 Query: 201 VLRKAILETI 210 ++R+AILE + Sbjct: 161 LIRQAILEKL 170 >gi|322831770|ref|YP_004211797.1| ribosome-associated GTPase EngA [Rahnella sp. Y9602] gi|321166971|gb|ADW72670.1| ribosome-associated GTPase EngA [Rahnella sp. Y9602] Length = 494 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P + + Sbjct: 202 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MVRDER 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLS 163 + S IV+ K D +S Sbjct: 313 ILNSGRSLVIVVNKWDGMS 331 >gi|224023939|ref|ZP_03642305.1| hypothetical protein BACCOPRO_00656 [Bacteroides coprophilus DSM 18228] gi|224017161|gb|EEF75173.1| hypothetical protein BACCOPRO_00656 [Bacteroides coprophilus DSM 18228] Length = 476 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 17/191 (8%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N L+N + A S+ G T+ V +D NL Sbjct: 218 VGNALKNGVP-VAIVGETNAGKSTLLNALLNEER-AIVSDIHGTTRD----VIEDTMNLG 271 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V +ID +Q Q Sbjct: 272 G--ITFRFIDTAGI---RETTDTIESLG--IERSFQKLDQADIVLWIIDATCAEEQYHQL 324 Query: 141 VFSFLDK-KAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 L + + IVL K+D LSP ++A E L + K + + P V+ S+ +++ Sbjct: 325 ADKILPRCEGKHLVIVLNKVDLLSPADSSADEQLARLKTTLPDLPE-DACVLSLSAKQKE 383 Query: 198 GIEVLRKAILE 208 G+ L+K +++ Sbjct: 384 GLSQLQKQLVD 394 >gi|150020381|ref|YP_001305735.1| GTP-binding protein, HSR1-related [Thermosipho melanesiensis BI429] gi|149792902|gb|ABR30350.1| GTP-binding protein, HSR1-related [Thermosipho melanesiensis BI429] Length = 258 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 11/79 (13%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + +G NVGKS++IN RK LA+T APG T+ L + NL + Sbjct: 100 KLGETRVLIAGVPNVGKSTIINKFSGRK-LAKTGMAPGITRGLQWI----------NLGS 148 Query: 86 MALVDMPGYGYARAPKKNV 104 + L+D PG Y++ K+V Sbjct: 149 VKLLDTPGILYSKLFNKDV 167 >gi|78047628|ref|YP_363803.1| GTP-binding protein EngA [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123743974|sp|Q3BTW0|DER_XANC5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78036058|emb|CAJ23749.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 465 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + L P + +V Sbjct: 3 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR----LDEQQPFI-VV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + R + + L V ++D R G +D ++ ++L K A Sbjct: 57 DTGGIA---GDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ KID T + + + +V+ S+ R+GI+ L Sbjct: 112 RPTVLVINKIDGTDEETVRSEFARYGF---------SDVVALSAAHRQGIDEL 155 >gi|296532289|ref|ZP_06895028.1| ribosome-associated GTPase EngA [Roseomonas cervicalis ATCC 49957] gi|296267365|gb|EFH13251.1| ribosome-associated GTPase EngA [Roseomonas cervicalis ATCC 49957] Length = 445 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 17/134 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L RK LA + PG V +D + L A++ Sbjct: 3 PRIAIIGRPNVGKSTLFNRLAGRK-LAIVDDTPG--------VTRDRKETEARLGGRAVL 53 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLD 146 + G AP V +R SE + +R V ++D R G+ D+ ++L Sbjct: 54 LLDTAGLEEAPPDTVAGR----MRASSE-AAIRDADLVLFVVDARAGITPSDRAFAAWLR 108 Query: 147 KKAVSYQIVLTKID 160 +++V +V K + Sbjct: 109 RQSVPVLLVANKTE 122 >gi|224372205|ref|YP_002606577.1| GTP-binding protein EngA [Nautilia profundicola AmH] gi|254783161|sp|B9L7G9|DER_NAUPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|223589108|gb|ACM92844.1| ribosome-associated GTPase EngA [Nautilia profundicola AmH] Length = 461 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 10/130 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N LV + A S+ G T P D N+ ++ + VD Sbjct: 201 VAIVGRVNVGKSSLLNALVGEER-AIVSDVDGTT-----IDPID-ENIYHDGWNITFVDT 253 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R+ K+++ + L + E + + L+ID + G+ ++D+ + +DK Sbjct: 254 AGI-RRRSKIKDIEKYALLRTEKVLEEADIAI--LVIDAKEGIVELDEKIGGLIDKHKNG 310 Query: 152 YQIVLTKIDK 161 IV K D+ Sbjct: 311 VIIVANKWDE 320 >gi|21242765|ref|NP_642347.1| GTP-binding protein EngA [Xanthomonas axonopodis pv. citri str. 306] gi|325927625|ref|ZP_08188854.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Xanthomonas perforans 91-118] gi|26006715|sp|Q8PKY6|DER_XANAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|21108245|gb|AAM36883.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306] gi|325541992|gb|EGD13505.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Xanthomonas perforans 91-118] Length = 465 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + L P + +V Sbjct: 3 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR----LDEQQPFI-VV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + R + + L V ++D R G +D ++ ++L K A Sbjct: 57 DTGGIA---GDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ KID T + + + +V+ S+ R+GI+ L Sbjct: 112 RPTVLVINKIDGTDEETVRSEFARYGF---------SDVVALSAAHRQGIDEL 155 >gi|325919426|ref|ZP_08181452.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Xanthomonas gardneri ATCC 19865] gi|325550092|gb|EGD20920.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Xanthomonas gardneri ATCC 19865] Length = 465 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + L P + +V Sbjct: 3 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR----LDEERPFI-VV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + R + + L V ++D R G +D ++ ++L K A Sbjct: 57 DTGGIA---GDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ KID T + + + +V+ S+ R+GI+ L Sbjct: 112 RPTVLVINKIDGTDEETVRSEFARYGF---------SDVVALSAAHRQGIDEL 155 >gi|289666002|ref|ZP_06487583.1| GTP-binding protein EngA [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 465 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + L P + +V Sbjct: 3 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR----LDEQQPFI-VV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + R + + L V ++D R G +D ++ ++L K A Sbjct: 57 DTGGIA---GDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ KID T + + + +V+ S+ R+GI+ L Sbjct: 112 RPTVLVINKIDGTDEETVRSEFARYGF---------SDVVALSAAHRQGIDEL 155 >gi|45358853|ref|NP_988410.1| GTP-binding protein [Methanococcus maripaludis S2] gi|74553948|sp|Q6LXQ9|ENGB_METMP RecName: Full=Probable GTP-binding protein EngB gi|45047719|emb|CAF30846.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 230 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 25/158 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++ GRSNVGKS+ + LV KN+ R PG T + + ++ LV Sbjct: 38 PKVIVMGRSNVGKSTFVK-LVTGKNV-RVGKKPGVTLKITEY----------DMGTYILV 85 Query: 90 DMPGYGYARA-PKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCR-----------HGVKQ 136 D+PG+G+ KK + I+ Y+ + + + ++D + G Sbjct: 86 DLPGFGFMEGIEKKAQEKIKDEIIHYVEDNKDAIAASIHILDAKSFIDIVERWGNKGEVP 145 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT 174 ID ++ FL++ ++ V+ K+DK+ + L+K Sbjct: 146 IDLEMADFLEELELNPIFVVNKMDKIKNSEWDNHLDKV 183 >gi|154509437|ref|ZP_02045079.1| hypothetical protein ACTODO_01968 [Actinomyces odontolyticus ATCC 17982] gi|153799071|gb|EDN81491.1| hypothetical protein ACTODO_01968 [Actinomyces odontolyticus ATCC 17982] Length = 412 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 29/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKS+L N LV K +A TS P T+H + V D L LVD Sbjct: 120 VSIVGRPNVGKSTLTNALVGHK-IAITSGRPETTRHNIRGIVHGDNYQL-------VLVD 171 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQID-QDVFSFLDK 147 PGY R L+ + L++ R L V +++ C ++I D F + Sbjct: 172 TPGYHRPRT----------LLGKRLNDMVREALSEVDVVLFCLPADQRIGPGDQFIAREL 221 Query: 148 KAVSYQI--VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I V TK D + + L + L ++P SSV+ KGI+ LR+ Sbjct: 222 RGIKRPIIAVATKCDAVPRERVMKHLLSIEKL-----GEWAAIVPVSSVEGKGIDHLREV 276 Query: 206 ILETI 210 + +T+ Sbjct: 277 LAQTV 281 >gi|238921035|ref|YP_002934550.1| GTP-binding protein EngA [Edwardsiella ictaluri 93-146] gi|259645874|sp|C5BES7|DER_EDWI9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238870604|gb|ACR70315.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 494 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +IA GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 202 PINQPIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MERDER 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYVLIDTAGVRKRGKVTDTVEKFS--VIKTLQAIEDANVVLLVIDARQGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLS 163 + S +V+ K D LS Sbjct: 313 ILNSGRSLVVVVNKWDGLS 331 >gi|116515306|ref|YP_802935.1| EngA [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116257160|gb|ABJ90842.1| GTP-binding protein [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 449 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 24/180 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I F G++N GKS+LIN L+N N TS+ T+ + + S L N D Sbjct: 187 KICFLGKTNAGKSTLINSLLNS-NRVITSSTKNTTRDM-----IEIS-LINKKIKYIFTD 239 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLIDCRHGVKQIDQDVFSF 144 G R K + Y+ E+ + V ++ID G+ D + +F Sbjct: 240 TAGINKKRKKKD--------FLNYIFEKKSFDVVKKNQIAIIVIDSYVGISSKDLSIITF 291 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY---LIRNYPTAHPEVIPTSSVKRKGIEV 201 L + V++ I+ K D +S ++ ++ KY IRN + I +++K+ +++ Sbjct: 292 LINQNVAFFIIFNKWDLISKERKKKIKQENKYRLKFIRNIKIIYLSAIKKTNLKKIFLQI 351 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 18/134 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+SNVGKSSL N+L N K+ A TS+ P T+ + + LK + ++D Sbjct: 5 IALIGKSNVGKSSLFNLLTNSKS-ALTSDLPSTTR------DRQYGFLKIKEKKINIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSFLD 146 G + + LI + +++ L ++ L+D R+ + +D + + Sbjct: 58 AGINNIKRK------FFNLIEKQAYKQTILAIQEFHLIFFLVDARYELTIVDYFILKLIR 111 Query: 147 KKAVSYQIVLTKID 160 K+ + +++ KID Sbjct: 112 KENKNIFLLINKID 125 >gi|289670462|ref|ZP_06491537.1| GTP-binding protein EngA [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 465 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + L P + +V Sbjct: 3 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR----LDEQQPFI-VV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + R + + L V ++D R G +D ++ ++L K A Sbjct: 57 DTGGIA---GDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ KID T + + + +V+ S+ R+GI+ L Sbjct: 112 RPTVLVINKIDGTDEETVRSEFARYGF---------SDVVALSAAHRQGIDEL 155 >gi|293189528|ref|ZP_06608248.1| GTP-binding protein Era [Actinomyces odontolyticus F0309] gi|292821618|gb|EFF80557.1| GTP-binding protein Era [Actinomyces odontolyticus F0309] Length = 412 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 29/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKS+L N LV K +A TS P T+H + V D L LVD Sbjct: 120 VSIVGRPNVGKSTLTNALVGHK-IAITSGRPETTRHNIRGIVHGDNYQL-------VLVD 171 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQID-QDVFSFLDK 147 PGY R L+ + L++ R L V +++ C ++I D F + Sbjct: 172 TPGYHRPRT----------LLGKRLNDMVREALSEVDVVLFCLPADQRIGPGDQFIAREL 221 Query: 148 KAVSYQI--VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I V TK D + + L + L ++P SSV+ KGI+ LR+ Sbjct: 222 RGIKRPIIAVATKCDAVPRERVMKHLLSIEKL-----GEWAAIVPVSSVEGKGIDHLREV 276 Query: 206 ILETI 210 + +T+ Sbjct: 277 LAQTV 281 >gi|220904745|ref|YP_002480057.1| GTP-binding protein EngA [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869044|gb|ACL49379.1| small GTP-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 454 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 81/188 (43%), Gaps = 19/188 (10%) Query: 18 VPEIGLLPKAGPP--EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 +PE PP +A GR N GKSSLIN L + + S+ G T +D Sbjct: 177 LPEESSEEPPAPPALRLAMLGRPNAGKSSLINALSGEERMI-VSDVAGTT--------RD 227 Query: 76 FSNLK--NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL-IDCRH 132 +++ N VD G R K DS V + ST V LL +D Sbjct: 228 SVDVRFCRNGKDYVFVDTAG---VRRRTKITDSVEKYSVNSAIKSSTKADVTLLTLDAAE 284 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 GV Q D+ + L+ + + +++ K D L+P A + L+K + + H V+P S Sbjct: 285 GVSQQDKRLMDMLNTRKTPFMVLINKCD-LAPRNALDQLKKNISQMLAF-CPHVPVMPVS 342 Query: 193 SVKRKGIE 200 ++ K +E Sbjct: 343 ALTGKDLE 350 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 12/137 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I GR NVGKS+L N L+ R N A T + PG T+ V + + LPA +V Sbjct: 6 PRIILVGRPNVGKSTLFNRLI-RSNRAITHDRPGVTRDRMEGVVR-----RKGLPAFGIV 59 Query: 90 DMPGYGY------ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 D G P+ ++ + + V ++D R G+ +D+ + + Sbjct: 60 DTGGITLDAHAMVVEGPEGIRGFEQDILDQTEAAMKDAAAVAFVVDGRDGLLPLDEHLAA 119 Query: 144 FLDKKAVSYQIVLTKID 160 + +K + V+ K+D Sbjct: 120 HVRRKGLPTICVVNKVD 136 >gi|150402460|ref|YP_001329754.1| GTP-binding protein [Methanococcus maripaludis C7] gi|150033490|gb|ABR65603.1| GTP-binding protein HSR1-related [Methanococcus maripaludis C7] Length = 227 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 28/198 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++ GRSNVGKS+ + LV KN+ R PG T ++ + ++ LV Sbjct: 35 PKVIVMGRSNVGKSTFVK-LVTGKNV-RVGKKPGVTLKISEY----------DMGTYILV 82 Query: 90 DMPGYGYARA-PKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCR-----------HGVKQ 136 D+PG+G+ KK + I+ Y+ + + T+ ++D + G Sbjct: 83 DLPGFGFMEGIEKKAQEKIKDQIIDYVENNKDTIAASIHILDAKSFIDIVERWDNKGEVP 142 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH---PEVIPTSS 193 ID ++ FL++ ++ V+ K+DK+ + L++ + P +P + Sbjct: 143 IDLEMADFLEELELNPIFVVNKMDKIKNSEWDNHLDRVSETLGFLPPWRQWLDNFVPAIT 202 Query: 194 VKRKGIEVLRKAILETIN 211 GI+ ++ I + IN Sbjct: 203 RDNYGIDGIKHRINKRIN 220 >gi|262277163|ref|ZP_06054956.1| GTP-binding protein Era [alpha proteobacterium HIMB114] gi|262224266|gb|EEY74725.1| GTP-binding protein Era [alpha proteobacterium HIMB114] Length = 269 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 30/188 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS-NLKNNLPAMALVD 90 IA SG +N GKS+L+N N+K S + Q NF + +FS N KN M +D Sbjct: 6 IALSGPTNSGKSTLLNCFANKK----VSIVSKKIQTTNFNI--EFSINFKN--TQMIFID 57 Query: 91 MPGYGYARAPKKNV-DSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG+ K N+ D++ ++ L ER+ + V ++D + + +D+ + + L+ K Sbjct: 58 TPGF-----YKDNINDNYLREAIQGL-ERADI--VIFILDINNKFRHLDK-IKNNLE-KI 107 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE-----VLRK 204 + +V KIDK+ E LEK K L ++ E+ S++K+K E + +K Sbjct: 108 KNKILVFNKIDKVDN---DEILEKIKTL--DFINKFDEIFYISALKKKNTEKILNYIEKK 162 Query: 205 AILETINY 212 ++ ET + Sbjct: 163 SLKETTKF 170 >gi|94267274|ref|ZP_01290827.1| Small GTP-binding protein domain:GTP-binding [delta proteobacterium MLMS-1] gi|93452066|gb|EAT02754.1| Small GTP-binding protein domain:GTP-binding [delta proteobacterium MLMS-1] Length = 453 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 14/173 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +AF GR NVGKSSLIN L+ + + S PG T+ S L L Sbjct: 188 PVRVAFIGRPNVGKSSLINRLLGSERMV-VSEVPGTTRD------SVDSLLIRGEKQYRL 240 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G +++V+ + ++R L+ L+ID G+ + D V + ++ Sbjct: 241 IDTAGIRRKGKVRESVEKFS--VMRALAALERCDLALLVIDAAEGITEQDTKVIGYGLER 298 Query: 149 AVSYQIVLTKIDKLSPTTAQE-----TLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + ++L K D L Q+ +E+ + + P + S V R Sbjct: 299 GRACLVLLNKWDLLKDDRRQQKRLLAEVERAVHFVGYAPVHKLSALSGSGVGR 351 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 19/183 (10%) Query: 30 PEIAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKSSL N I RK + + R +H + + N L Sbjct: 8 PLVALVGRPNVGKSSLFNRIAGGRKAIVDPTPGVTRDRH--------YQQVSWNQRHFML 59 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ + ++ G R + + + LL+D R GV D V L + Sbjct: 60 IDTGGIEGDKSSEVPINRLIGEQSRQAVAEADV--ILLLLDARQGVTPDDYQVVEILRRS 117 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ KID A E ++ K L Y P++ P S+ G+ L A++ Sbjct: 118 GKPVHYLVNKID------APEQVD--KLLPTFYELGVPQLWPLSASHGLGLAELLDAVVA 169 Query: 209 TIN 211 + Sbjct: 170 ELG 172 >gi|300724175|ref|YP_003713492.1| GTP-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297630709|emb|CBJ91374.1| GTP-binding protein, essential for cell growth [Xenorhabdus nematophila ATCC 19061] Length = 496 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 9/145 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 199 PEEEFDPTTLPLKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRD-SIYIP----- 251 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 252 MERDGREYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 309 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLS 163 + F+ S I + K D +S Sbjct: 310 LSLLGFILNSGRSLVIAVNKWDGMS 334 >gi|289581246|ref|YP_003479712.1| small GTP-binding protein [Natrialba magadii ATCC 43099] gi|289530799|gb|ADD05150.1| small GTP-binding protein [Natrialba magadii ATCC 43099] Length = 205 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 27/148 (18%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMAL 88 E+ GRSNVGKS+L+ L T +PG T+ N + P+DF + Sbjct: 11 EVILVGRSNVGKSTLMRELTGHS--FDTGGSPGVTRSPNHYDWAPEDF----------VI 58 Query: 89 VDMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLL----------IDCRHGVKQI 137 D+PG+G+ + ++ + IV+Y+ E + V +L ID G +I Sbjct: 59 TDLPGFGFMSGVHEERREEIKTNIVQYIEEYADNVLVAVLVVDGKSVIDIIDRHSGPDEI 118 Query: 138 --DQDVFSFLDKKAVSYQIVLTKIDKLS 163 D ++F FL + + + + K+DK+ Sbjct: 119 PYDVEMFHFLRELEIPTVVAVNKMDKVD 146 >gi|153953981|ref|YP_001394746.1| GTP-binding protein EngA [Clostridium kluyveri DSM 555] gi|219854595|ref|YP_002471717.1| hypothetical protein CKR_1252 [Clostridium kluyveri NBRC 12016] gi|189037142|sp|A5N7W7|DER_CLOK5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783148|sp|B9E1C8|DER_CLOK1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|146346862|gb|EDK33398.1| Hypothetical protein CKL_1356 [Clostridium kluyveri DSM 555] gi|219568319|dbj|BAH06303.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 438 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 9/136 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IAF G+ NVGKSSLIN L+ + + S+ PG T+ D S L+ + L+D Sbjct: 178 KIAFIGKPNVGKSSLINKLLGEERVI-VSDIPGTTRD-----AID-SYLETDEGKFLLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ ++ + + ER+ + C+ L++D H + + D+ + + + Sbjct: 231 TAGVRRKSKVKEEIEKYSVIRTYTAVERADV-CI-LMLDATHDISEQDEKIIGYAHELNK 288 Query: 151 SYQIVLTKIDKLSPTT 166 + +V+ K D + T Sbjct: 289 AIMVVINKWDLVDKDT 304 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 21/140 (15%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L ++ ++ + PG T+ + ++ N Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-ISIVEDTPGVTRD-RVYAQAEWLNYN-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVF 142 ++D G P+ N +I+ + ++ T + ++D R G+ D++V Sbjct: 55 IIDTGGI----EPENN-----DVIISKMRRQAQVAIETANVIIFIVDGREGLTAADKEVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKL 162 L K +V+ KID + Sbjct: 106 QMLRKSKKPIVLVVNKIDNM 125 >gi|72162618|ref|YP_290275.1| GTPase [Thermobifida fusca YX] gi|71916350|gb|AAZ56252.1| similar to GTPases [Thermobifida fusca YX] Length = 673 Score = 43.9 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 87/201 (43%), Gaps = 30/201 (14%) Query: 32 IAFSGRSNVGKSSLINIL----VNRKNLARTSNAP---------GRTQHLNFF-VPKDFS 77 +A +G + GKSSL N L ++R + R + G L++ VP + Sbjct: 195 VALAGGTGSGKSSLFNALCGLELSRVGVTRPTTTAAHACVWGTEGADNLLDWLGVPPRYR 254 Query: 78 NLK--------NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 + + ++L + L+D+P + RA + LI R+ +++L Sbjct: 255 HSRVSELDRGESDLTGLILLDLPDHDSVRAAQTAESD--HLI------RTADLLIWVLDP 306 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 ++ + + + VL ++D++ P +E L + L+ + HP ++ Sbjct: 307 QKYADAAVHHRYLAEMSGHGAVMVAVLNQVDRVEPDDVEELLTDLRRLLEDESGVHPRIL 366 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TS+V +G+ LR+ ++ET+ Sbjct: 367 TTSAVTGEGLRELRQLLVETV 387 >gi|20091396|ref|NP_617471.1| GTP-binding protein [Methanosarcina acetivorans C2A] gi|19916534|gb|AAM05951.1| GTP-binding protein [Methanosarcina acetivorans C2A] Length = 209 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 69/171 (40%), Gaps = 32/171 (18%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 VPE G+ EI F GRSNVGKSSL+ L K R PG T DF Sbjct: 7 VPESGI-----NLEIIFVGRSNVGKSSLLKELFGAK--VRVGKRPGVTLRPTHARISDF- 58 Query: 78 NLKNNLPAMALVDMPGYGYARAPK-KNVDSWGGLIVRYLSERSTLRCVYLLI-------- 128 + DMPG+G+ K + D V Y+ + + + +L+ Sbjct: 59 ---------LITDMPGFGFMSGVKDRKQDIVKDKTVHYIEDNAERIKIGVLVVDGPSFPE 109 Query: 129 -----DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT 174 D R + ID ++F FL + + + K+DK+ + L++ Sbjct: 110 IVDRWDSRDQI-PIDVEMFDFLREIGIDTIVAANKMDKVKADEYNDLLDEV 159 >gi|295693063|ref|YP_003601673.1| GTP-binding protein era homolog [Lactobacillus crispatus ST1] gi|295031169|emb|CBL50648.1| GTP-binding protein era homolog [Lactobacillus crispatus ST1] Length = 300 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 22/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N LV +K +A TSN P T++ + + + V Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYTSDEMQ--------VVFV 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG P +D + + +S + + V +++ K DQ + + L + Sbjct: 62 DTPG---IFKPHSKLDDY--MDKASVSSLNDVDLVLFMVEPEEMGKG-DQYIANLLKEVK 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V +V+ K+D + P ++ L E++P S+ + GIE L K I E Sbjct: 116 VPVLLVINKVDDIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDLLKTIKE 169 >gi|307151569|ref|YP_003886953.1| tRNA modification GTPase TrmE [Cyanothece sp. PCC 7822] gi|306981797|gb|ADN13678.1| tRNA modification GTPase TrmE [Cyanothece sp. PCC 7822] Length = 458 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 226 VAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLVVGGIP-IQVLDT 278 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G R+ +E + L + L ID + G D+ ++ + + + Sbjct: 279 AGI---RETDDRVEKIGVERSRHAAEAADL--ILLTIDAQTGWTPEDEQIYQQVKHRPLI 333 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K D L++ K + NYP+ V+ T + K +GI+ L K IL ++ Sbjct: 334 --LVINKTD----------LQEAKSV--NYPSDITSVVETVAAKNEGIDQLEKIILNSVQ 379 >gi|269140141|ref|YP_003296842.1| GTP-binding protein [Edwardsiella tarda EIB202] gi|267985802|gb|ACY85631.1| GTP-binding protein [Edwardsiella tarda EIB202] gi|304559975|gb|ADM42639.1| GTP-binding protein EngA [Edwardsiella tarda FL6-60] Length = 494 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +IA GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 202 PINQPIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MERDER 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYVLIDTAGVRKRGKVTDTVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLS 163 + S +V+ K D LS Sbjct: 313 ILNSGRSLVVVVNKWDGLS 331 >gi|319790169|ref|YP_004151802.1| GTP-binding protein Era [Thermovibrio ammonificans HB-1] gi|317114671|gb|ADU97161.1| GTP-binding protein Era [Thermovibrio ammonificans HB-1] Length = 305 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 23/167 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ K +A ++ P T+H V +LK+ + +D Sbjct: 12 VAILGRPNVGKSTLLNSLLGTK-VAIVTDKPQTTRHRIVGV----KHLKD--AQIVFLDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLD 146 PG + + RY++E + + LID R G+ + D+ + + Sbjct: 65 PGIHKEKFE----------LNRYMNEIAFSVVPDADIILFLIDARQGLTEADRKILQKIG 114 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ V+ I+K+ +E L + + + +P E+IP S+ Sbjct: 115 EEKRKDTKVIVVINKIDGVNKEELLPLIEEIHKEFPFVD-EIIPISA 160 >gi|285018364|ref|YP_003376075.1| GTP-binding protein enga [Xanthomonas albilineans GPE PC73] gi|283473582|emb|CBA16085.1| probable gtp-binding protein enga [Xanthomonas albilineans] Length = 465 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 20/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + L+ P +V Sbjct: 3 PLVALVGRPNVGKSTLFNALTRSRD-ALVHDQPGVTRDRHYGVCR----LQPETP-FVIV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + G + + V ++D R G +D ++ S+L K A Sbjct: 57 DTGGI-----SGEEEGLAGATASQARAAAGEADLVLFVVDGREGASSLDDEILSWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +++ KID Q E +Y + E I S+ R+GI+ L +L Sbjct: 112 RPTILLINKIDGTDED--QVRAEFARYGL-------GEAIAVSAAHRQGIDDLLDHVL 160 Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 9/136 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G IAF GR NVGKS+L+N L+ + + S+ PG T+ + V +L+ + Sbjct: 177 GRMRIAFVGRPNVGKSTLVNRLLGEERMI-ASDVPGTTRD-SIAV-----DLERDDRPYR 229 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G ++ V+ + + + L LL+D GV D V + Sbjct: 230 LIDTAGLRRRGRVEEAVEKFS--VFKTLQAIEQCEVAVLLLDASEGVTDQDASVLGAILD 287 Query: 148 KAVSYQIVLTKIDKLS 163 + + + K D L+ Sbjct: 288 AGRALVVAVNKWDGLT 303 >gi|91784203|ref|YP_559409.1| GTP-binding protein EngA [Burkholderia xenovorans LB400] gi|123168328|sp|Q13X32|DER_BURXL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|91688157|gb|ABE31357.1| Small GTP-binding protein [Burkholderia xenovorans LB400] Length = 445 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + +V DF + P L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVI-AFDMPGTTRD-SIYV--DFE--RGGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 292 ALVVGVNKWDGLDPHVRERT 311 >gi|312068814|ref|XP_003137390.1| elongation factor Tu GTP binding domain-containing protein [Loa loa] gi|307767449|gb|EFO26683.1| elongation factor Tu GTP binding domain-containing protein [Loa loa] Length = 1055 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 31/147 (21%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFS 77 P I G + GK+ +++ + R+ + A G TQ + VP +DF Sbjct: 467 PVICVLGHVDTGKTKMLDTI--RRTNVQDGEAGGITQQIGATQVPAAAIIERTKMVRDFI 524 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY--LLIDCRHGVK 135 + +P + ++D PG+ +S+ L R + C Y L++D HG++ Sbjct: 525 GHEMKIPGLLIIDTPGH----------ESFSNL-----RSRGSSLCDYAILVVDLMHGLE 569 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKL 162 Q + F+ L K+ + I L KID+L Sbjct: 570 QQTLESFNLLRKRQTPFVIALNKIDRL 596 >gi|320094216|ref|ZP_08026020.1| GTP-binding protein Era [Actinomyces sp. oral taxon 178 str. F0338] gi|319978841|gb|EFW10380.1| GTP-binding protein Era [Actinomyces sp. oral taxon 178 str. F0338] Length = 396 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 29/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKS+L N LV +K +A TS P T+H + V D L LVD Sbjct: 104 VSIVGRPNVGKSTLTNALVGQK-VAITSGRPETTRHNIRGIVHGDGYQL-------VLVD 155 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQID-QDVFSFLDK 147 PGY R L+ + L++ R L V ++ C ++I D F + Sbjct: 156 TPGYHRPRT----------LLGKRLNDMVREALAEVDAVLFCLPADQRIGPGDQFIAREL 205 Query: 148 KAVSYQI--VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + V + V TK D + + L + L ++P SSV+ KGI+ LR Sbjct: 206 RGVKRPVIAVATKCDAVGRERVMKHLLAIERL-----GEWSAIVPVSSVEGKGIDHLRDV 260 Query: 206 ILETI 210 + +T+ Sbjct: 261 LAQTV 265 >gi|120601203|ref|YP_965603.1| small GTP-binding protein [Desulfovibrio vulgaris DP4] gi|120561432|gb|ABM27176.1| GTP-binding protein HflX [Desulfovibrio vulgaris DP4] Length = 547 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA---M 86 P + G +N GKS+L+N L N + LA F D + + P + Sbjct: 331 PLASLVGYTNAGKSTLLNALTNAEVLAEN----------KLFATLDPTTRRLRFPEEREL 380 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH-GVKQID------Q 139 L D G+ PK+ V+++ + L LLI G ++D + Sbjct: 381 ILADTVGF-IRNLPKELVEAFRATL-------EELEAADLLIHVADAGHPELDRQLRAVE 432 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 D+ ++ + +VL K D T E L +T L AHPE IP ++++R+G+ Sbjct: 433 DILVEMEMHDIPRLLVLNKWD-----TVPEELRETLLL------AHPEAIPVAALQREGL 481 Query: 200 EVLRKAILETINY 212 + L I I++ Sbjct: 482 DALAHGIASRIDW 494 >gi|269125577|ref|YP_003298947.1| hypothetical protein Tcur_1326 [Thermomonospora curvata DSM 43183] gi|268310535|gb|ACY96909.1| hypothetical protein Tcur_1326 [Thermomonospora curvata DSM 43183] Length = 568 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 33/57 (57%) Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL +ID+L P+ E + + L+ A P ++ TS+V G++ R+ ++ET+ Sbjct: 217 VVLNQIDRLQPSEVDECVSDLRRLLEAEGLADPRIVTTSTVTEGGVDAFRRVLVETV 273 >gi|313905842|ref|ZP_07839200.1| GTP-binding protein Era [Eubacterium cellulosolvens 6] gi|313469356|gb|EFR64700.1| GTP-binding protein Era [Eubacterium cellulosolvens 6] Length = 304 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 16/143 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TS P T++ + + ++ + +D Sbjct: 11 VALIGRPNVGKSTLMNHLIGQK-IAITSRKPQTTRN------RIQTIYNSDRGQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + G +V Y +E S + V LI+ V +Q + LDK Sbjct: 64 PGIHKAK------NKLGEYMV-YAAESSLKNVDAVMWLIEPGAYVGAAEQHIVQMLDKAG 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLE 172 + +V+ KIDK+ ET++ Sbjct: 117 LPVILVINKIDKVKKDVVAETIQ 139 >gi|257064345|ref|YP_003144017.1| iron-only hydrogenase maturation protein HydF [Slackia heliotrinireducens DSM 20476] gi|256791998|gb|ACV22668.1| iron-only hydrogenase maturation protein HydF [Slackia heliotrinireducens DSM 20476] Length = 416 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 20/140 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G N GKSSL+N V +NLA S+ PG T V K L + + +VD Sbjct: 23 IGFFGVRNAGKSSLVNA-VTGQNLAVVSDTPGTTTD---PVRKAMELLP--VGPVVIVDT 76 Query: 92 PGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 PG +D G L + + + L++D G+ +D+ + K Sbjct: 77 PG----------IDDTGELGELRVEKARRAMDSADVAVLVVDGTQGLGAVDEQLIDEFRK 126 Query: 148 KAVSYQIVLTKIDKLSPTTA 167 + V Y +VL K D TA Sbjct: 127 REVPYAVVLNKADLAGEQTA 146 >gi|187924514|ref|YP_001896156.1| GTP-binding protein EngA [Burkholderia phytofirmans PsJN] gi|238689579|sp|B2SXS6|DER_BURPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|187715708|gb|ACD16932.1| small GTP-binding protein [Burkholderia phytofirmans PsJN] Length = 445 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + +V DF + P L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVI-AFDMPGTTRD-SIYV--DFE--RGGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 292 ALVVGVNKWDGLDPHVRERT 311 >gi|327183708|gb|AEA32155.1| GTPase Era [Lactobacillus amylovorus GRL 1118] Length = 301 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 26/182 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N LV +K +A TSN P T++ + D + V Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYTSDDMQ--------IVFV 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG P +D + + LS + + V +++ + + DQ + L + Sbjct: 62 DTPG---IFKPHSKLDDY--MDKASLSSLNDVDLVLFMVEPEK-IGKGDQYIADLLKEVK 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +V+ K+D++ P ++ L + E++P S+ + GIE L L T Sbjct: 116 VPVFLVINKVDQIHPNKLLPIMDSYHKL-----ESFKEILPISATQGIGIEDL----LAT 166 Query: 210 IN 211 +N Sbjct: 167 LN 168 >gi|296158988|ref|ZP_06841816.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1] gi|295890863|gb|EFG70653.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1] Length = 445 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + +V DF + P L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVI-AFDMPGTTRD-SIYV--DFE--RGGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 292 ALVVGVNKWDGLDPHVRERT 311 >gi|83591335|ref|YP_431344.1| tRNA modification GTPase TrmE [Moorella thermoacetica ATCC 39073] gi|123523726|sp|Q2RFI8|MNME_MOOTA RecName: Full=tRNA modification GTPase mnmE gi|83574249|gb|ABC20801.1| tRNA modification GTPase trmE [Moorella thermoacetica ATCC 39073] Length = 462 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 34/186 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-------HLNFFVPKDFSNLKNNLP 84 +A GR NVGKSSL+N L+N++ A SN PG T+ L F + Sbjct: 223 VAIVGRPNVGKSSLLNALLNQER-AIVSNIPGTTRDTIEETLQLGGFTCR---------- 271 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G R ++S G + R + V +++D + G++ D+ V Sbjct: 272 ---LIDTAGL---RETADELESIG--VARSKKAIAAADLVLVVVDLQTGIQDEDRRVLES 323 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + K + I+ K+D L + L + NYP + S++K KG++ L + Sbjct: 324 VRDKVLI--IIGNKLD-LVAHDINKKLADLESFAGNYPR-----VAVSALKGKGLDELAR 375 Query: 205 AILETI 210 + E + Sbjct: 376 KVQEIV 381 >gi|256383901|gb|ACU78471.1| tRNA modification GTPase TrmE [Mycoplasma mycoides subsp. capri str. GM12] gi|256384732|gb|ACU79301.1| tRNA modification GTPase TrmE [Mycoplasma mycoides subsp. capri str. GM12] gi|296455373|gb|ADH21608.1| tRNA modification GTPase TrmE [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 452 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 16/144 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G++NVGKSS++N L+N A ++ PG T+ + + NL+N ++ L+D Sbjct: 221 AIIGQTNVGKSSILNALINEDK-AIVTDIPGTTRD----IVEGQINLEN--VSLNLIDTA 273 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R V++ G L + L + L V +++ + +Q++F L K +Y Sbjct: 274 GI---RKTSDVVENLGILKSKNLINEADL--VLFVVNKENINDSDNQEIFELLKDK--TY 326 Query: 153 QIVLTKIDKLSPTTAQETLEKTKY 176 +++ K +KLS T Q LEK KY Sbjct: 327 ILIVNKAEKLSQTEKQ-NLEK-KY 348 >gi|37525336|ref|NP_928680.1| GTP-binding protein EngA [Photorhabdus luminescens subsp. laumondii TTO1] gi|41017002|sp|Q7N702|DER_PHOLL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|36784763|emb|CAE13673.1| GTP-binding protein EngA [Photorhabdus luminescens subsp. laumondii TTO1] Length = 493 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 202 PSTLPLKLAIVGKPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYILIDTAGVRKRGKITETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D +S + E Y + A I S++ G+ L Sbjct: 313 ILNSGRSLVIAVNKWDGMSQEDKERVKEMLDYRLGFVDFARVHFI--SALHGSGVGNLFD 370 Query: 205 AILETIN 211 +ILE + Sbjct: 371 SILEAYD 377 >gi|260173329|ref|ZP_05759741.1| putative GTP-binding protein, putative GTPase [Bacteroides sp. D2] gi|299149447|ref|ZP_07042504.1| GTP-binding protein [Bacteroides sp. 3_1_23] gi|315921602|ref|ZP_07917842.1| conserved hypothetical protein [Bacteroides sp. D2] gi|298512634|gb|EFI36526.1| GTP-binding protein [Bacteroides sp. 3_1_23] gi|313695477|gb|EFS32312.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 396 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 80/190 (42%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A IA GR N GKSSLIN L ++ A S+ PG T L V K ++ P Sbjct: 7 PNANRLHIALFGRRNSGKSSLINALTG-QDTALVSDTPGTTTDL---VSKAM-EIQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I R L LL C +++ Sbjct: 62 CL-FIDTPGF----------DDEGELGELRISRTLKAIEKTDIALLL--CGDTTFSHEKE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L +K + VL KID +E + I P +I S+ ++ GIE Sbjct: 109 MLALLKEKNIPVIPVLNKID------IRENSDSLATYIEEECKIRPLLI--SAKEKTGIE 160 Query: 201 VLRKAILETI 210 +R+AILE + Sbjct: 161 QIRQAILEKL 170 >gi|256599907|pdb|3IEV|A Chain A, Crystal Structure Of Era In Complex With Mggnp And The 3' End Of 16s Rrna Length = 308 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+L+N L+ K ++ S G T+ V N+ N + +D Sbjct: 13 VAIVGKPNVGKSTLLNNLLGTK-VSIISPKAGTTRMRVLGV----KNIPNE-AQIIFLDT 66 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVF-SFLDKKA 149 PG PKK+ D G +V + + +ID G + D++++ +F+ Sbjct: 67 PGI---YEPKKS-DVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLN 122 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ KIDK+ P A+ L + + +P E++P S++K ++ L K IL+ Sbjct: 123 KPVIVVINKIDKIGP--AKNVLPLIDEIHKKHPELT-EIVPISALKGANLDELVKTILK 178 >gi|55379049|ref|YP_136899.1| GTP-binding protein [Haloarcula marismortui ATCC 43049] gi|74552636|sp|Q5UZW0|ENGB_HALMA RecName: Full=Probable GTP-binding protein EngB gi|55231774|gb|AAV47193.1| probable GTP-binding protein EngB [Haloarcula marismortui ATCC 43049] Length = 205 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 23/151 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ GRSNVGKS+L+ + + T PG T+ N F D+++ + D Sbjct: 11 EVVLIGRSNVGKSTLMREITG--HTFDTGQRPGVTRSPNHF---DWASAD-----FVISD 60 Query: 91 MPGYGYARAPKKNV-DSWGGLIVRYLSERSTL----------RCVYLLIDCRHGVKQIDQ 139 +PG+G+ + ++V + +V+Y+ + + V +ID G +I Sbjct: 61 LPGFGFMKGVPEDVREEIKTDVVQYVERNAEHILVGILVVDGKSVIDIIDRHSGPDEIPH 120 Query: 140 DV--FSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 DV F FL + V + + K+DK+ A+ Sbjct: 121 DVEMFHFLREVGVEPVVAVNKMDKVDDKDAR 151 >gi|254283197|ref|ZP_04958165.1| GTP-binding protein EngA [gamma proteobacterium NOR51-B] gi|219679400|gb|EED35749.1| GTP-binding protein EngA [gamma proteobacterium NOR51-B] Length = 472 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 12/138 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A +N G T+ + + + K ++ Sbjct: 3 PVVALVGRPNVGKSTLFNQLTRTRD-ALVANLSGLTR------DRQYGDGKVGAVPYIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +D+ + E + + V L++D R G++ D+ + S+L +K+ Sbjct: 56 DTGGIS---GDESGIDAAMAGQSQTAIEEADI--VLLMVDGRAGIQAGDEALVSYLRRKS 110 Query: 150 VSYQIVLTKIDKLSPTTA 167 + +V+ KID + A Sbjct: 111 KPFHLVINKIDGVGEEAA 128 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 57/137 (41%), Gaps = 9/137 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G +A GR NVGKS+LIN L+ + + PG T+ + DF A Sbjct: 174 GGIRVAAIGRPNVGKSTLINRLLGDDRVV-VFDEPGTTRDSIYI---DFERRGQ---AYT 226 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G + ++ V+ + IV+ L + V LL+D GV + D + Sbjct: 227 LIDTAGVRRRKNVRETVEKFS--IVKTLKAIADAHVVILLMDAHEGVVEQDLHLLGQCID 284 Query: 148 KAVSYQIVLTKIDKLSP 164 I + K D + P Sbjct: 285 AGRGLVIAVNKWDGVDP 301 >gi|71892302|ref|YP_278036.1| GTP-binding protein EngA [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796408|gb|AAZ41159.1| putative GTP-binding protein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 471 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 25/182 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG--RTQHLNFFVPKDFSNLKNNLPAMA 87 P I G+ NVGKS+L N L + + A SN PG R + +F K F ++ Sbjct: 3 PIITLIGQKNVGKSTLFNKLTHTHD-ALISNYPGLTRDRQYGYFQCKQFKSI-------- 53 Query: 88 LVDMPGYG-YARAPKKNVDSWGGLIVRYLSERSTLRC-VYLLIDCRHGV-KQIDQDVFSF 144 L+D G + +N+ S+ V Y + + + L + R V I+ D+F+F Sbjct: 54 LIDTGGIDKFCSTKTENIQSY----VTYQTILAMQEADILLFVMDRQSVGTSINNDIFNF 109 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K + +V+ KID + + + I+N +I S++ GI+ L + Sbjct: 110 LKKIKKNIFVVINKIDNIPHHIHTMIWDYCSFGIKN-------IIFISAIHGHGIDNLLE 162 Query: 205 AI 206 I Sbjct: 163 KI 164 >gi|15606987|ref|NP_214369.1| GTP-binding protein Era [Aquifex aeolicus VF5] gi|3913584|sp|O67800|ERA_AQUAE RecName: Full=GTPase Era gi|2984240|gb|AAC07768.1| GTP-binding protein Era [Aquifex aeolicus VF5] Length = 301 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 15/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+L+N L+ K ++ S G T+ V N+ N + +D Sbjct: 6 VAIVGKPNVGKSTLLNNLLGTK-VSIISPKAGTTRMRVLGV----KNIPNEA-QIIFLDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVF-SFLDKKA 149 PG PKK+ D G +V + + +ID G + D++++ +F+ Sbjct: 60 PGI---YEPKKS-DVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLN 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ KIDK+ P A+ L + + +P E++P S++K ++ L K IL+ Sbjct: 116 KPVIVVINKIDKIGP--AKNVLPLIDEIHKKHPELT-EIVPISALKGANLDELVKTILK 171 >gi|167031553|ref|YP_001666784.1| selenocysteine-specific translation elongation factor [Pseudomonas putida GB-1] gi|166858041|gb|ABY96448.1| selenocysteine-specific translation elongation factor [Pseudomonas putida GB-1] Length = 640 Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 19/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSN-APGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +G + GK++L+ L + R A G T L + ++ L P +D Sbjct: 3 VGTAGHIDHGKTALLQALTGQAGDQRQEERARGMTIDLGY----RYAALSEGAPLTGFID 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ I L + V L++ GV ++ + ++ + Sbjct: 59 VPGHER-------------FIHNMLVGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGI 105 Query: 151 SYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 S +V ++K D++ P+ E + L+ P A P SS+ +GIE LR+A+LE Sbjct: 106 SQALVAISKCDRVEPSRLAEVQIQVSELLAPGPYAGARQFPLSSISGEGIEALRQALLE 164 >gi|46581638|ref|YP_012446.1| GTP-binding protein HflX [Desulfovibrio vulgaris str. Hildenborough] gi|46451061|gb|AAS97706.1| GTP-binding protein HflX [Desulfovibrio vulgaris str. Hildenborough] gi|311235280|gb|ADP88134.1| GTP-binding proten HflX [Desulfovibrio vulgaris RCH1] Length = 547 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 39/193 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA---M 86 P + G +N GKS+L+N L N + LA F D + + P + Sbjct: 331 PLASLVGYTNAGKSTLLNALTNAEVLAEN----------KLFATLDPTTRRLRFPEEREL 380 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH-GVKQID------Q 139 L D G+ PK+ V+++ + L LLI G ++D + Sbjct: 381 ILADTVGF-IRNLPKELVEAFRATL-------EELEAADLLIHVADAGHPELDRQLRAVE 432 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 D+ ++ + +VL K D T E L +T L AHPE IP ++++R+G+ Sbjct: 433 DILVEMEMHDIPRLLVLNKWD-----TVPEELRETLLL------AHPEAIPVAALQREGL 481 Query: 200 EVLRKAILETINY 212 + L I I++ Sbjct: 482 DALAHGIASRIDW 494 >gi|315038512|ref|YP_004032080.1| GTP-binding protein Era [Lactobacillus amylovorus GRL 1112] gi|312276645|gb|ADQ59285.1| GTP-binding protein Era [Lactobacillus amylovorus GRL 1112] Length = 301 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 26/182 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N LV +K +A TSN P T++ + D + V Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYTSDDMQ--------IVFV 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG P +D + + LS + + V +++ + + DQ + L + Sbjct: 62 DTPG---IFKPHSKLDDY--MDKASLSSLNDVDLVLFMVEPEK-IGKGDQYIADLLKEVK 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +V+ K+D++ P ++ L E++P S+ + GIE L L T Sbjct: 116 VPVFLVINKVDQIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDL----LAT 166 Query: 210 IN 211 +N Sbjct: 167 LN 168 >gi|113953182|ref|YP_731887.1| tRNA modification GTPase TrmE [Synechococcus sp. CC9311] gi|123327545|sp|Q0I6N5|MNME_SYNS3 RecName: Full=tRNA modification GTPase mnmE gi|113880533|gb|ABI45491.1| tRNA modification GTPase TrmE [Synechococcus sp. CC9311] Length = 463 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 12/114 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N+L +R+ A ++ PG T+ L + + + +P + L+D Sbjct: 230 VALVGRPNVGKSSLLNLL-SRRERAIVTDLPGTTRDL-----LESEIVLDGVP-ITLLDT 282 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 G RA V+ G I R ++ V LL D G DQ +F+ + Sbjct: 283 AGI---RATSNAVEKLG--IARSRDALASADLVLLLFDLAQGWSDDDQALFALI 331 >gi|62185493|ref|YP_220278.1| GTP-binding protein EngA [Chlamydophila abortus S26/3] gi|81312359|sp|Q5L4W4|DER_CHLAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|62148560|emb|CAH64331.1| putative GTP-binding protein [Chlamydophila abortus S26/3] Length = 474 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 15/135 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMA 87 P +IA GR NVGKSS+IN L+N + N PG T+ +++ +N + Sbjct: 211 PLKIALIGRPNVGKSSIINALLNEERCI-IDNVPGTTRDNIDILYS-------HNDRSYL 262 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFL 145 +D G ++ K +++ W I +E++ R L+ID H + D+ + S + Sbjct: 263 FIDTAGLRKMKSVKNSIE-W---ISSSRTEKAIARADICLLVIDATHHLSSYDKRILSLI 318 Query: 146 DKKAVSYQIVLTKID 160 K+ + I++ K D Sbjct: 319 SKQKKPHIILVNKWD 333 >gi|220935213|ref|YP_002514112.1| GTP-binding protein EngA [Thioalkalivibrio sp. HL-EbGR7] gi|254783176|sp|B8GTN1|DER_THISH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219996523|gb|ACL73125.1| GTP-binding protein EngA [Thioalkalivibrio sp. HL-EbGR7] Length = 464 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 9/133 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IAF GR N GKS+LIN ++ + + T PG T+ + F+P + + L+D Sbjct: 180 IAFVGRPNAGKSTLINRILGEERVVATE-IPGTTRD-SIFIP-----FERDGQQYTLIDT 232 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L V +++D R G+ + D + + + Sbjct: 233 AGVRRRSRVHEAIEKFS--VVKTLQAIDAAHVVVMVLDAREGISEQDAHLLGVVLDAGRA 290 Query: 152 YQIVLTKIDKLSP 164 + + K D L P Sbjct: 291 LVVAINKWDGLDP 303 >gi|91788466|ref|YP_549418.1| GTP-binding protein EngA [Polaromonas sp. JS666] gi|123355649|sp|Q12AC2|DER_POLSJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|91697691|gb|ABE44520.1| Small GTP-binding protein domain [Polaromonas sp. JS666] Length = 447 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 17/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR NVGKS+LIN + + L + + PG T+ VP + + K L+D Sbjct: 182 LAVAGRPNVGKSTLINTWLGEERLV-SFDLPGTTRDA-ISVPFERAGQK-----FELIDT 234 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L V LL+D GV D + ++ + + Sbjct: 235 AGLRRKGKVFEAIEKFS--VVKTLQAIEGANVVLLLLDATQGVTDQDAHIAGYILESGRA 292 Query: 152 YQIVLTKIDKLSPTTAQETLEK---TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K D + +ETLE+ T+ + + H S++KR+G+ + K+I++ Sbjct: 293 VVLAINKWDAVD-AYQRETLERSIETRLAFLKFASIH----KISAIKRQGLAPVWKSIVQ 347 Query: 209 T 209 Sbjct: 348 A 348 >gi|254499341|ref|ZP_05112012.1| GTP-binding protein EngA [Legionella drancourtii LLAP12] gi|254351446|gb|EET10310.1| GTP-binding protein EngA [Legionella drancourtii LLAP12] Length = 468 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + ++N + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKTQD-ALVADFPGLTRD------RQYGQAQHNEKSYIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G G VDS +S++ST+ V L+D R G+ +D+ + + Sbjct: 56 DTGGIGVDDIA---VDSL-------MSKQSTIALNEADIVLFLVDGRSGLTGVDEKIANN 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L K + +V+ K + L A Sbjct: 106 LRKLSKKVHLVVNKTEGLDDDVA 128 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 9/133 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IAF+GR NVGKS+LIN ++ + + + PG T+ + +P + L+D Sbjct: 176 KIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRD-SIAIP-----FVRDEQRYILID 228 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +++ L L+D G+ D ++ F+ + Sbjct: 229 TAGVRRKSRIDEKIEKFS--VIKTLQAIKESNVCLQLLDANEGITDQDMNLLGFIIESGK 286 Query: 151 SYQIVLTKIDKLS 163 + I + K D L Sbjct: 287 ALVIAVNKWDGLD 299 >gi|258544602|ref|ZP_05704836.1| GTP-binding protein Era [Cardiobacterium hominis ATCC 15826] gi|258520144|gb|EEV89003.1| GTP-binding protein Era [Cardiobacterium hominis ATCC 15826] Length = 300 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 32/184 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN L+ +K +A TS P T+H + N + VD Sbjct: 8 IAVVGRPNVGKSTLINHLIGQK-IAITSKKPQTTRHALLGIHTTGEN------QIIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQD-----VFSF 144 PG +R N R+++ + ++ V L++ + D+D + Sbjct: 61 PGIHQSREKAIN---------RHMNRTAWQSMDYVDLILQVSEAGRWNDEDARIAKALAA 111 Query: 145 LDKKAVSYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 DK + V KID+L T + LE + L N+ +IP S+ +R+ ++ L Sbjct: 112 GDKPVIQ---VPNKIDRLRDKTVLLKELEHIQSL-GNWQA----IIPVSAQQRQNLDTLE 163 Query: 204 KAIL 207 +A++ Sbjct: 164 RALI 167 >gi|268593180|ref|ZP_06127401.1| ribosome-associated GTPase EngA [Providencia rettgeri DSM 1131] gi|291311226|gb|EFE51679.1| ribosome-associated GTPase EngA [Providencia rettgeri DSM 1131] Length = 492 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 9/140 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 201 PTTLPIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRD-SIYIP-----MERDER 253 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 254 EYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 311 Query: 145 LDKKAVSYQIVLTKIDKLSP 164 + S I + K D + P Sbjct: 312 ILNAGRSLVIAVNKWDGMKP 331 >gi|254423905|ref|ZP_05037623.1| tRNA modification GTPase TrmE [Synechococcus sp. PCC 7335] gi|196191394|gb|EDX86358.1| tRNA modification GTPase TrmE [Synechococcus sp. PCC 7335] Length = 459 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 31/184 (16%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ NVGKSSL+N ++ + A +N PG T+ + + + +P + ++D Sbjct: 225 KVAIIGQPNVGKSSLLNAW-SKSDRAIVTNLPGTTRDV-----VESQLIVGGIP-IQVLD 277 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G A V+ G I R L+ + V L ID G DQ ++ + K Sbjct: 278 TAGI---HAATNEVEKIG--IERSLTAAQSADLVLLTIDATVGWTAADQALYEQI--KDT 330 Query: 151 SYQIVLTKIDKLS---PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + IV+ KID L+ PTT P H ++ T++ GI L AIL Sbjct: 331 PHIIVVNKIDLLADSHPTT--------------LPLPHSPIVHTAAAVNHGIPELEAAIL 376 Query: 208 ETIN 211 N Sbjct: 377 SAAN 380 >gi|326331287|ref|ZP_08197579.1| ribosome-associated GTPase EngA [Nocardioidaceae bacterium Broad-1] gi|325950920|gb|EGD42968.1| ribosome-associated GTPase EngA [Nocardioidaceae bacterium Broad-1] Length = 461 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 21/141 (14%) Query: 27 AGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 AGP P +A GR NVGKS+L+N ++ R+ A + PG T+ + + N A Sbjct: 22 AGPQPVVAVVGRPNVGKSTLVNRIIGRRE-AVVQDVPGVTRDRVSY------DADWNGKA 74 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSER----STLRCVYLLIDCRHGVKQIDQDV 141 LVD G+ P GL R ++ S V ++D G+ D+ V Sbjct: 75 FTLVDTGGWD----PDAQ-----GLAERIAAQAEIAVSLADAVLFVVDATVGITDADEAV 125 Query: 142 FSFLDKKAVSYQIVLTKIDKL 162 L K +V K+D + Sbjct: 126 VRILRKSGKPVVLVANKVDDM 146 >gi|260101321|ref|ZP_05751558.1| GTP-binding protein Era [Lactobacillus helveticus DSM 20075] gi|260084906|gb|EEW69026.1| GTP-binding protein Era [Lactobacillus helveticus DSM 20075] gi|328465883|gb|EGF37066.1| GTPase Era [Lactobacillus helveticus MTCC 5463] Length = 301 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + +++ K + VD Sbjct: 11 VALLGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNR---ISGIYTSDKMQV---VFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + + LS + + V +++ + + DQ + + L + V Sbjct: 64 PG---IFKPHSKLDDY--MDKASLSSLNDVDLVLFMVEPEE-IGKGDQYIANLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K+D++ P ++ L E++P S+ + GIE L L TIN Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDL----LNTIN 168 >gi|290981914|ref|XP_002673676.1| GTP-binding protein [Naegleria gruberi] gi|284087261|gb|EFC40932.1| GTP-binding protein [Naegleria gruberi] Length = 645 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 19/102 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G NVGKSS+IN L +K + TS PG T+H+ + KN + + D Sbjct: 425 IGFVGHPNVGKSSIINALTGKK-VVSTSYTPGHTKHVQTL----YLETKNKM--IQFCDC 477 Query: 92 PGYGY-ARAPKKNVDSWGGL-----------IVRYLSERSTL 121 PG + A K + G+ IVRYL+ER L Sbjct: 478 PGLVFPAVGASKALQILSGIYPISQVRDPYSIVRYLAERVDL 519 >gi|238855193|ref|ZP_04645512.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 269-3] gi|260664556|ref|ZP_05865408.1| ribosome-associated GTPase EngA [Lactobacillus jensenii SJ-7A-US] gi|282932513|ref|ZP_06337938.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 208-1] gi|313471978|ref|ZP_07812470.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 1153] gi|238832085|gb|EEQ24403.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 269-3] gi|239529090|gb|EEQ68091.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 1153] gi|260561621|gb|EEX27593.1| ribosome-associated GTPase EngA [Lactobacillus jensenii SJ-7A-US] gi|281303462|gb|EFA95639.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 208-1] Length = 436 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%) Query: 31 EIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAM 86 EIAFS GR NVGKSS+IN ++ +K + +N G T+ FV +D + + Sbjct: 174 EIAFSVIGRPNVGKSSIINAMLGQKRVI-VANEEGTTRDAVDTPFVAEDGTKFR------ 226 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + + + L + +RS + C L++D G+++ D+ V F Sbjct: 227 -MIDTAGIRRRGKVYEKTEKYSVLRAQAAIQRSDVVC--LVLDASTGIREQDKHVAGFAH 283 Query: 147 KKAVSYQIVLTKID 160 IV+ K D Sbjct: 284 DAGRGMLIVVNKWD 297 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A G+ NVGKS+L N ++N + LA + PG T+ N+ Sbjct: 4 PTVAIVGQPNVGKSTLFNRIINER-LAIVEDRPGVTRDRNY 43 >gi|227356207|ref|ZP_03840596.1| GTP-binding protein [Proteus mirabilis ATCC 29906] gi|227163671|gb|EEI48587.1| GTP-binding protein [Proteus mirabilis ATCC 29906] Length = 501 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 13/154 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 209 PTTLPVKLAIVGRPNVGKSTLTNRMLGEERVV-VYDMPGTTRD-SIYIP-----MERDGK 261 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G K+ V+ + +++ L L+ID R G+ D + + Sbjct: 262 EYILIDTAGVRKRGKVKETVEKFS--VIKTLQAIEDCNVALLVIDAREGISDQDLSLLGY 319 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + S I + K D ++ QE E+ K ++ Sbjct: 320 ILNSGRSLVIAVNKWDGMT----QEDREQVKDML 349 >gi|183599734|ref|ZP_02961227.1| hypothetical protein PROSTU_03237 [Providencia stuartii ATCC 25827] gi|188021993|gb|EDU60033.1| hypothetical protein PROSTU_03237 [Providencia stuartii ATCC 25827] Length = 490 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 9/140 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 199 PTTLPIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRD-SIYIP-----MERDGR 251 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 252 EYVLIDTAGVRKRGKITETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 309 Query: 145 LDKKAVSYQIVLTKIDKLSP 164 + S I + K D + P Sbjct: 310 ILNAGRSLVIAVNKWDGMKP 329 >gi|325956928|ref|YP_004292340.1| GTPase Era [Lactobacillus acidophilus 30SC] gi|325333493|gb|ADZ07401.1| GTPase Era [Lactobacillus acidophilus 30SC] Length = 301 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 22/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N LV +K +A TSN P T++ + D + V Sbjct: 11 VALIGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYTSDDMQ--------IVFV 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG P +D + + LS + + V +++ + + DQ + L + Sbjct: 62 DTPG---IFKPHSKLDDY--MDKASLSSLNDVDLVLFMVEPEK-IGKGDQYIADLLKEVK 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 V +V+ K+D++ P ++ L E++P S+ + GIE L Sbjct: 116 VPVFLVINKVDQIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDL 163 >gi|134107181|ref|XP_777721.1| hypothetical protein CNBA5990 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260417|gb|EAL23074.1| hypothetical protein CNBA5990 [Cryptococcus neoformans var. neoformans B-3501A] Length = 674 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 12/80 (15%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVP 73 + PE P P + G+ NVGKSSL+N L+ + + R S PG+T+H F+ P Sbjct: 366 QSTPEEAKAPSTEPLTLGLIGQPNVGKSSLLNALLGEQKV-RASRTPGKTKHFQTMFWGP 424 Query: 74 KDFSNLKNNLPAMALVDMPG 93 K + +VD PG Sbjct: 425 KK---------EIKIVDCPG 435 >gi|328952198|ref|YP_004369532.1| GTP-binding protein engA [Desulfobacca acetoxidans DSM 11109] gi|328452522|gb|AEB08351.1| GTP-binding protein engA [Desulfobacca acetoxidans DSM 11109] Length = 449 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 16/141 (11%) Query: 25 PKAG-PPE---IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 P AG PPE +A GR NVGKSS IN ++ + L S+ PG T+ D + Sbjct: 166 PDAGEPPEGIRVAVLGRPNVGKSSFINRVLGEERLI-VSDTPGTTRD-----AIDAPLIW 219 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +N P + L+D G +N++ G+I + L V LL+D + G+ + D Sbjct: 220 DNRPYV-LIDTAGIRRRSRIHQNLER--GMIWQALRALQRAEVVLLLLDAQEGLTEQDLR 276 Query: 141 VFSFLDKKAVSYQIVLTKIDK 161 + +F+ AV+ + L ++K Sbjct: 277 ILNFI---AVAGKGCLIGVNK 294 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 16/133 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N L R++ A + PG T+ + + ++ A L+ Sbjct: 3 PLVALIGRTNVGKSTLFNRL-TRQSRALVDDQPGVTRD------RLYGDVTWEDHAFLLI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDK 147 D G+G + + VR +E + V ++D R ++ D +V +L + Sbjct: 56 DTGGFG-------DTEDALSSRVRQQAELAAGEADLVLFMVDGRQEIQPDDLEVAQYLRR 108 Query: 148 KAVSYQIVLTKID 160 +V+ KID Sbjct: 109 SGKPVLLVINKID 121 >gi|197285696|ref|YP_002151568.1| GTP-binding protein EngA [Proteus mirabilis HI4320] gi|238693198|sp|B4EZS9|DER_PROMH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|194683183|emb|CAR43820.1| GTP-binding protein [Proteus mirabilis HI4320] Length = 496 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 13/154 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 204 PTTLPVKLAIVGRPNVGKSTLTNRMLGEERVV-VYDMPGTTRD-SIYIP-----MERDGK 256 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G K+ V+ + +++ L L+ID R G+ D + + Sbjct: 257 EYILIDTAGVRKRGKVKETVEKFS--VIKTLQAIEDCNVALLVIDAREGISDQDLSLLGY 314 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + S I + K D ++ QE E+ K ++ Sbjct: 315 ILNSGRSLVIAVNKWDGMT----QEDREQVKDML 344 >gi|154688207|ref|YP_001423368.1| tRNA modification GTPase TrmE [Bacillus amyloliquefaciens FZB42] gi|308175809|ref|YP_003922514.1| tRNA modification GTPase TrmE [Bacillus amyloliquefaciens DSM 7] gi|205829057|sp|A7ZAW1|MNME_BACA2 RecName: Full=tRNA modification GTPase mnmE gi|154354058|gb|ABS76137.1| TrmE [Bacillus amyloliquefaciens FZB42] gi|307608673|emb|CBI45044.1| tRNA modification GTPase TrmE [Bacillus amyloliquefaciens DSM 7] gi|328555785|gb|AEB26277.1| tRNA modification GTPase TrmE [Bacillus amyloliquefaciens TA208] gi|328914174|gb|AEB65770.1| tRNA modification GTPase mnmE [Bacillus amyloliquefaciens LL3] Length = 459 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 228 GRPNVGKSSLLNSLVHETK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L +L+ H + ++DV F + + ++ Sbjct: 280 --RETEDIVERIGVERSRQVLKEADL----ILLVLNHSEELSEEDVKLFEAVEGMDVIVI 333 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D + A E+ K L + P V+ TS +K +GI+ L +AI Sbjct: 334 MNKTDLEAKIDA----ERVKELAKGRP-----VVTTSLLKEEGIQDLEEAI 375 >gi|221133872|ref|ZP_03560177.1| GTP-binding protein EngA [Glaciecola sp. HTCC2999] Length = 481 Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 9/141 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + F+P ++ + L Sbjct: 194 PIKLAVVGKPNVGKSTLTNRILGEERVV-VYDQPGTTRD-SIFIP-----MERDEREYIL 246 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G R + V+ + IV+ L V L+ID R G+ D + F+ Sbjct: 247 IDTAGVRKRRKINEAVEKFS--IVKTLQAIEEANVVLLVIDAREGISDQDLSLLGFILNA 304 Query: 149 AVSYQIVLTKIDKLSPTTAQE 169 S + + K D L E Sbjct: 305 GRSLVLAVNKWDGLQAHVKDE 325 >gi|30248179|ref|NP_840249.1| GTP-binding protein EngA [Nitrosomonas europaea ATCC 19718] gi|37999533|sp|Q82XU6|DER_NITEU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|30180064|emb|CAD84064.1| GTP-binding protein (HSR1-related):AAA ATPase superfamily [Nitrosomonas europaea ATCC 19718] Length = 467 Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA +GR NVGKS+LIN L+ + + + PG T+ + +V ++ + L+ Sbjct: 179 PVIAIAGRPNVGKSTLINTLLGEERVI-AFDQPGTTRD-SIYVDFEYGQR-----SYTLI 231 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + V+ + +V+ L V L++D H + D + F+ + Sbjct: 232 DTAGLRRSGKVWETVEKFS--VVKTLQSIEAANVVILVLDAHHEISDQDAHIAGFILETG 289 Query: 150 VSYQIVLTKIDKLS 163 S + + K D L Sbjct: 290 RSLVVAINKWDGLD 303 >gi|262368561|ref|ZP_06061890.1| GTP-binding protein Era [Acinetobacter johnsonii SH046] gi|262316239|gb|EEY97277.1| GTP-binding protein Era [Acinetobacter johnsonii SH046] Length = 342 Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRH-------KIVGIDSRAKSQAVFVD 93 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK--QIDQDVFSFLDKK 148 PG KK V + ++ R S S LR V L++ K Q D+ V L Sbjct: 94 TPGMH-----KKEVRAINKMMNRAAS--SALRDVNLVLFVLDADKWTQNDELVLEKLKNA 146 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V+ KID L L + + + N+ E++P S+++ ++ LR I Sbjct: 147 EMPVILVINKIDTLENKNHALPLIQERAKLMNF----AEIVPVSALRGANLDHLRDTI 200 >gi|52673270|emb|CAH56508.1| putative tRNA modification GTPase trmE [Bacillus amyloliquefaciens FZB42] Length = 462 Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 231 GRPNVGKSSLLNSLVHETK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L +L+ H + ++DV F + + ++ Sbjct: 283 --RETEDIVERIGVERSRQVLKEADL----ILLVLNHSEELSEEDVKLFEAVEGMDVIVI 336 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D + A E+ K L + P V+ TS +K +GI+ L +AI Sbjct: 337 MNKTDLEAKIDA----ERVKELAKGRP-----VVTTSLLKEEGIQDLEEAI 378 >gi|254519255|ref|ZP_05131311.1| small GTP-binding protein [Clostridium sp. 7_2_43FAA] gi|226913004|gb|EEH98205.1| small GTP-binding protein [Clostridium sp. 7_2_43FAA] Length = 438 Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 9/129 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSLIN L+ + L S+ PG T+ S L+ LVD Sbjct: 179 IAMIGKPNVGKSSLINRLLGEERLI-VSDIPGTTRD------SIDSALETEQGKFILVDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + + ER+ + C+ L+ID GV + D+ + + + + Sbjct: 232 AGLRRKSKVKEEIERYSVIRTYAAIERADV-CI-LMIDATEGVTEQDEKIIGYAHEMNKA 289 Query: 152 YQIVLTKID 160 +++ K D Sbjct: 290 IMVIVNKWD 298 >gi|297565398|ref|YP_003684370.1| ribosome-associated GTPase EngA [Meiothermus silvanus DSM 9946] gi|296849847|gb|ADH62862.1| ribosome-associated GTPase EngA [Meiothermus silvanus DSM 9946] Length = 437 Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 28/178 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N L+ +++ A ++ PG T+ L + +++ LVD Sbjct: 4 VVIVGRPNVGKSSLFNRLLGKRH-AVVADQPGVTRDLK------EATVESERGRFKLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLI---VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G D W I V E + L V +D R + D +V FL +K Sbjct: 57 GGLWSG-------DVWEQKIKEKVEAALEDADL--VLFTVDGRADISPADLEVADFLRRK 107 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V TK+D P + YL + E +PTSS +G++ L I Sbjct: 108 HSNVLLVATKVD--DP-------KHENYLGDLWALGFGEPVPTSSSHARGLDELEDKI 156 >gi|312143158|ref|YP_003994604.1| small GTP-binding protein [Halanaerobium sp. 'sapolanicus'] gi|311903809|gb|ADQ14250.1| small GTP-binding protein [Halanaerobium sp. 'sapolanicus'] Length = 409 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 24/41 (58%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 PK P IA GR N GKSSLIN L N+K LA S PG T Sbjct: 5 PKGNRPHIAVFGRRNAGKSSLINSLCNQK-LALVSEVPGTT 44 >gi|306818072|ref|ZP_07451803.1| GTP-binding protein Era [Mobiluncus mulieris ATCC 35239] gi|304649036|gb|EFM46330.1| GTP-binding protein Era [Mobiluncus mulieris ATCC 35239] Length = 303 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 28/177 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN +V RK +A TS P T+H+ A +V Sbjct: 19 VAVLGRPNVGKSTLINEMVGRK-IAITSARPETTRHV----------------ARGIVHR 61 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER--STLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG+ + L+ + L++R V LL+ C ++I ++K+ Sbjct: 62 PGFQLVLVDTPGIHRPRTLLGQRLNDRVEEAQADVDLLVFCVPADQEIGPGDRRIVEKQL 121 Query: 150 VSYQI----VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +I V+TK D +P L L N E++P S+V+ K +E+L Sbjct: 122 RANRIPALAVVTKTDVATPNQIAAQL-----LALNELYDFREIVPVSAVQGKQVELL 173 >gi|21228817|ref|NP_634739.1| GTP-binding protein [Methanosarcina mazei Go1] gi|25452939|sp|Q8PTK0|ENGB_METMA RecName: Full=Probable GTP-binding protein EngB gi|20907337|gb|AAM32411.1| hypothetical protein MM_2715 [Methanosarcina mazei Go1] Length = 209 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 27/155 (17%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F+GRSNVGKSSL+ L K R PG T + + + D Sbjct: 15 EIIFAGRSNVGKSSLLKELFGAK--VRVGKRPGVT----------LRPTHAQVSDLLITD 62 Query: 91 MPGYGYARAPK-KNVDSWGGLIVRYLSERSTLRCVYLLI-------------DCRHGVKQ 136 MPG+G+ K + D V Y+ + + + +L+ D R + Sbjct: 63 MPGFGFMSGVKERKQDIVKDKTVHYIEDNAGRIKIAVLVIDGPAFPEIVDRWDSRDQI-P 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL 171 ID ++F FL + + + K+DK+ + L Sbjct: 122 IDVEMFDFLREIGIDTIVAANKMDKVKENESDPLL 156 >gi|11465467|ref|NP_045142.1| thiophen and furan oxidation protein [Cyanidium caldarium] gi|14195300|sp|Q9TLX6|MNME_CYACA RecName: Full=Probable tRNA modification GTPase mnmE gi|6466370|gb|AAF12952.1|AF022186_75 unknown [Cyanidium caldarium] Length = 465 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 19/179 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 ++ G+ NVGKSSL+N + R+ + +N PG T+ + F L N L + L Sbjct: 222 TKVCIIGKPNVGKSSLLNAIAKRE-CSIVTNFPGTTRDIVSFETM----LGNTL--VRLY 274 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R ++ G + + V+ ++D G+ D +F+ L+ Sbjct: 275 DTAGI---RQSVDEIEKIGISKTELFVDECQI--VFFVLDAIQGLSSEDSVIFNKLNLMN 329 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ I++ KIDK E E K ++ +I S++K G+E L IL+ Sbjct: 330 KNFVILINKIDKKVQRKIDEIYETLK-------CSNRRIIEVSAIKNIGLEKLNNCILD 381 >gi|150390502|ref|YP_001320551.1| GTP-binding protein, HSR1-related [Alkaliphilus metalliredigens QYMF] gi|149950364|gb|ABR48892.1| GTP-binding protein, HSR1-related [Alkaliphilus metalliredigens QYMF] Length = 285 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 10/79 (12%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K P I G NVGKSS+IN L RK+ ART + PG T+ K + LK N Sbjct: 119 KERPIRIMMVGIPNVGKSSIINQLAGRKS-ARTGDKPGVTKA------KQWIRLKGN--- 168 Query: 86 MALVDMPGYGYARAPKKNV 104 M L+D PG + + +NV Sbjct: 169 MELLDTPGILWPKFEDQNV 187 >gi|329943260|ref|ZP_08292034.1| small GTP-binding domain protein [Chlamydophila psittaci Cal10] gi|332287839|ref|YP_004422740.1| ribosome-associated GTPase [Chlamydophila psittaci 6BC] gi|313848411|emb|CBY17415.1| putative GTP-binding protein [Chlamydophila psittaci RD1] gi|325506575|gb|ADZ18213.1| ribosome-associated GTPase [Chlamydophila psittaci 6BC] gi|328814807|gb|EGF84797.1| small GTP-binding domain protein [Chlamydophila psittaci Cal10] gi|328915100|gb|AEB55933.1| GTP-binding protein engA [Chlamydophila psittaci 6BC] Length = 474 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +IA GR NVGKSS+IN L+N + N PG T+ N + + N + Sbjct: 211 PLKIALIGRPNVGKSSIINALLNEERCI-IDNIPGTTRD-NIDILYSY-----NDRSYLF 263 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLD 146 +D G ++ K +++ W I +E++ R L+ID H + D+ + S + Sbjct: 264 IDTAGLRKMKSVKNSIE-W---ISSSRTEKAIARADICLLVIDATHHLSSYDKRILSLIS 319 Query: 147 KKAVSYQIVLTKID 160 K+ + I++ K D Sbjct: 320 KQKKPHIILVNKWD 333 >gi|304311812|ref|YP_003811410.1| GTP-binding protein [gamma proteobacterium HdN1] gi|301797545|emb|CBL45765.1| GTP-binding protein [gamma proteobacterium HdN1] Length = 474 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 13/150 (8%) Query: 18 VPEIGLLPKAGPPE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 V E +LP+ P + IA GR NVGKS+LIN ++ + + + PG T+ + ++P Sbjct: 162 VGEDAILPEPTPEDTGIRIAVVGRPNVGKSTLINRMLGEERVV-VFDMPGTTRD-SIYIP 219 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + K L+D G + V+ + +++ L V L++D R G Sbjct: 220 YERRGQK-----YTLIDTAGVRKRGRVDEAVEKFS--VIKTLQAIEDAHVVILVLDAREG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 + D + F+ + S I L K D + Sbjct: 273 IVDQDLHLLGFVLETGRSLLIALNKWDGMD 302 >gi|58259113|ref|XP_566969.1| GTPase [Cryptococcus neoformans var. neoformans JEC21] gi|57223106|gb|AAW41150.1| GTPase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 638 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 12/80 (15%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVP 73 + PE P P + G+ NVGKSSL+N L+ + + R S PG+T+H F+ P Sbjct: 357 QSTPEEAKAPSTEPLTLGLIGQPNVGKSSLLNALLGEQKV-RASRTPGKTKHFQTMFWGP 415 Query: 74 KDFSNLKNNLPAMALVDMPG 93 K + +VD PG Sbjct: 416 KK---------EIKIVDCPG 426 >gi|326316284|ref|YP_004233956.1| ribosome-associated GTPase EngA [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373120|gb|ADX45389.1| ribosome-associated GTPase EngA [Acidovorax avenae subsp. avenae ATCC 19860] Length = 447 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ G T+ + + N K ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKSRD-AIVADFAGLTRD------RHYGNGKLGKHEYIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + + V ++D R G+ D D+ ++L + Sbjct: 56 DTGGF----EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGLSAQDHDIANYLRRLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K E + + L Y EV+P S+ +G+ L + LET Sbjct: 112 KPCLLVGNK---------AEGMREGAQLAEFYELGLGEVLPVSAAHGQGVRSLLETALET 162 Query: 210 IN 211 + Sbjct: 163 LQ 164 Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 10/146 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A +GR NVGKS+LIN + + L + PG T+ VP + N L Sbjct: 179 PIRLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRD-AISVP-----FERNGQQFEL 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L + V LL+D GV D + ++ + Sbjct: 232 IDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILES 289 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKT 174 + + + K D + ++ LE++ Sbjct: 290 GRAVVLAVNKWDAVD-DYGRQMLERS 314 >gi|303232256|ref|ZP_07318955.1| ribosome-associated GTPase EngA [Atopobium vaginae PB189-T1-4] gi|302481666|gb|EFL44727.1| ribosome-associated GTPase EngA [Atopobium vaginae PB189-T1-4] Length = 439 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 9/132 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N L ++ N + +N G T+ D ++ P + LVD Sbjct: 182 IAVIGRPNVGKSSLVNKL-SKTNRSLVANIAGTTRD-----AIDICFEYHDTP-IRLVDT 234 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++V+ + +VR L ++ID G+ + DQ + + + Sbjct: 235 AGMRKKSQVHEDVEYYS--LVRGLQAMDKADVALMVIDAAEGMTEQDQKLMGMAIDRGCA 292 Query: 152 YQIVLTKIDKLS 163 +V+ KID LS Sbjct: 293 LVLVINKIDLLS 304 >gi|297205894|ref|ZP_06923289.1| ribosome-associated GTPase EngA [Lactobacillus jensenii JV-V16] gi|297149020|gb|EFH29318.1| ribosome-associated GTPase EngA [Lactobacillus jensenii JV-V16] Length = 439 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%) Query: 31 EIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAM 86 EIAFS GR NVGKSS+IN ++ +K + +N G T+ FV +D + + Sbjct: 177 EIAFSVIGRPNVGKSSIINAMLGQKRVI-VANEEGTTRDAVDTPFVAEDGTKFR------ 229 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + + + L + +RS + C L++D G+++ D+ V F Sbjct: 230 -MIDTAGIRRRGKVYEKTEKYSVLRAQAAIQRSDVVC--LVLDASTGIREQDKHVAGFAH 286 Query: 147 KKAVSYQIVLTKID 160 IV+ K D Sbjct: 287 DAGRGMIIVVNKWD 300 Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A G+ NVGKS+L N ++N + LA + PG T+ N+ Sbjct: 7 PTVAIVGQPNVGKSTLFNRIINER-LAIVEDRPGVTRDRNY 46 >gi|256851011|ref|ZP_05556400.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 27-2-CHN] gi|260661223|ref|ZP_05862137.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 115-3-CHN] gi|282932036|ref|ZP_06337494.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 208-1] gi|256616073|gb|EEU21261.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 27-2-CHN] gi|260548160|gb|EEX24136.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 115-3-CHN] gi|281303803|gb|EFA95947.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 208-1] Length = 436 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%) Query: 31 EIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAM 86 EIAFS GR NVGKSS+IN ++ +K + +N G T+ FV +D + + Sbjct: 174 EIAFSVIGRPNVGKSSIINAMLGQKRVI-VANEEGTTRDAVDTPFVAEDGTKFR------ 226 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + + + L + +RS + C L++D G+++ D+ V F Sbjct: 227 -MIDTAGIRRRGKVYEKTEKYSVLRAQAAIQRSDVVC--LVLDASTGIREQDKHVAGFAH 283 Query: 147 KKAVSYQIVLTKID 160 IV+ K D Sbjct: 284 DAGRGMIIVVNKWD 297 Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A G+ NVGKS+L N ++N + LA + PG T+ N+ Sbjct: 4 PTVAIVGQPNVGKSTLFNRIINER-LAIVEDRPGVTRDRNY 43 >gi|229824833|ref|ZP_04450902.1| hypothetical protein GCWU000182_00182 [Abiotrophia defectiva ATCC 49176] gi|229790836|gb|EEP26950.1| hypothetical protein GCWU000182_00182 [Abiotrophia defectiva ATCC 49176] Length = 445 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 11/169 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA G+ NVGKSS+IN L+ +N S+ G T+ + ++ N ++ Sbjct: 177 PKIAIIGKPNVGKSSIINRLLG-ENRVIVSDVAGTTRDAI------DTRIRRNGKDYIMI 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + IVR +S V L+ID G+ + D + ++ Sbjct: 230 DTAGIRRKSRIKEDIEYYS--IVRTVSAVERADIVVLVIDATEGITEQDAKIAGIAHERG 287 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + + K D + T T E +K K ++ P A I S +R Sbjct: 288 KGIIVAVNKWDLIEKTDKTMNEHTKKLKEILAYMPYAEFLFISAVSGQR 336 >gi|169831333|ref|YP_001717315.1| small GTP-binding protein [Candidatus Desulforudis audaxviator MP104C] gi|238688334|sp|B1I462|DER_DESAP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169638177|gb|ACA59683.1| small GTP-binding protein [Candidatus Desulforudis audaxviator MP104C] Length = 438 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 16/173 (9%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKD 75 G+P P++ P IA GR NVGKSSL+N ++ + + S+ PG T+ ++ +D Sbjct: 163 GMPAGADEPRSEPVRIAVVGRPNVGKSSLVNAILGEERVI-VSDVPGTTRDAVDTLFRRD 221 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 +D G +++++ + L + ERS L V L D GV Sbjct: 222 GRE-------YVFIDTAGMRRKARIRESIEYYSVLRAKKALERSDLALVVL--DFTDGVT 272 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKID-----KLSPTTAQETLEKTKYLIRNYPT 183 DQ + ++ IV+ K D +S + QE + + I P Sbjct: 273 NQDQRIAGLAEEAGKGTIIVVNKWDLAEGSGVSASRYQEEVRRELIFIGYAPV 325 >gi|161833759|ref|YP_001597955.1| GTP-binding protein EngA [Candidatus Sulcia muelleri GWSS] gi|293977869|ref|YP_003543299.1| ribosome-associated GTPase EngA [Candidatus Sulcia muelleri DMIN] gi|229807527|sp|A8Z608|DER_SULMW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|152206249|gb|ABS30559.1| GTP-binding protein EngA [Candidatus Sulcia muelleri GWSS] gi|292667800|gb|ADE35435.1| ribosome-associated GTPase EngA [Candidatus Sulcia muelleri DMIN] Length = 433 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 11/187 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K P IA GR NVGKS+LIN L+N KN +N G T+ + F Sbjct: 171 KKNIPRIAIVGRPNVGKSTLINTLLN-KNKNIVTNISGTTRDSIDVLYSKFG------IE 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G + K++++ + ++R + L+ID + G + D ++F + Sbjct: 224 CILVDTAGIRKKKNIKEDIEFYS--VMRAIKSIQNSDVSLLIIDSKSGFESQDINIFKII 281 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLE-KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + +++ K D + + E K K +I + P +S K+ I+ ++ Sbjct: 282 ENNNKGIVLLINKWDIFNNNYLINSYENKIKKIIAPFNDV-PIFFTSSFTKKDIIKSIKT 340 Query: 205 AILETIN 211 A+ T N Sbjct: 341 AVKITFN 347 >gi|330874711|gb|EGH08860.1| GTP-binding protein Der [Pseudomonas syringae pv. glycinea str. race 4] Length = 440 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 300 GFALEAGRALVIALNKWDGMTP 321 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ +V KID + E L + ++ P + IP + +GI ++L Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGISQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALRE 161 >gi|66815479|ref|XP_641756.1| hypothetical protein DDB_G0279259 [Dictyostelium discoideum AX4] gi|60469791|gb|EAL67778.1| hypothetical protein DDB_G0279259 [Dictyostelium discoideum AX4] Length = 841 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K GP I+ G+ N GKSSL+N ++ + + S+ PG T P D + L + Sbjct: 341 KPGPIRISIVGQPNAGKSSLLNKIIEEER-SIVSDIPGTTHD-----PVDCNFLWRDTHE 394 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++L+D G K ++ L E+S V+++ID G+ + D + SF+ Sbjct: 395 LSLIDTAGIRRRSTHKIGLEKSSVLWALKAIEKS--HVVFIVIDATIGITEQDLKIASFV 452 Query: 146 DKKAVSYQIVLTKID 160 + S I++ K D Sbjct: 453 VENRKSMIIIVNKWD 467 >gi|269976802|ref|ZP_06183777.1| GTP-binding protein Era [Mobiluncus mulieris 28-1] gi|307700621|ref|ZP_07637649.1| GTP-binding protein Era [Mobiluncus mulieris FB024-16] gi|269934999|gb|EEZ91558.1| GTP-binding protein Era [Mobiluncus mulieris 28-1] gi|307614151|gb|EFN93392.1| GTP-binding protein Era [Mobiluncus mulieris FB024-16] Length = 303 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 28/177 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN +V RK +A TS P T+H+ A +V Sbjct: 19 VAVLGRPNVGKSTLINEMVGRK-IAITSARPETTRHV----------------ARGIVHR 61 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER--STLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG+ + L+ + L++R V LL+ C ++I ++K+ Sbjct: 62 PGFQLVLVDTPGIHRPRTLLGQRLNDRVEEAQADVDLLVFCVPADQEIGPGDRRIVEKQL 121 Query: 150 VSYQI----VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +I V+TK D +P L L N E++P S+V+ K +E+L Sbjct: 122 RANRIPALAVVTKTDVATPNQIAAQL-----LALNELYDFREIVPVSAVQGKQVELL 173 >gi|240103824|ref|YP_002960133.1| GTP-binding protein [Thermococcus gammatolerans EJ3] gi|239911378|gb|ACS34269.1| GTP-binding protein, HSR1-related [Thermococcus gammatolerans EJ3] Length = 182 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 34/192 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L +K + PG T+ V ++ ++DM Sbjct: 2 IIFVGRSNVGKSTLIFRLTGKK--VKRGKRPGVTRKPVEVVWRN----------RRVIDM 49 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERST-LRCVYLLIDC-----------RHGVKQID 138 PG+G+ P++ + IV ++ + + + L++D + G +D Sbjct: 50 PGFGFMSGLPRQVQERIKDEIVHFIEDNADKIDLAVLVVDGKAAPEIIERWEKRGEIPVD 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV----IPTSSV 194 + F FL + + + + KID++ Q + YL + + EV +P S+ Sbjct: 110 VEFFQFLRELEIPTIVAVNKIDRVK--NVQRVIH---YLAQKFGVPLDEVPETFVPISAK 164 Query: 195 KRKGIEVLRKAI 206 K IE L++ I Sbjct: 165 FGKNIEELKRLI 176 >gi|229035142|ref|ZP_04189088.1| tRNA modification GTPase mnmE [Bacillus cereus AH1271] gi|228728208|gb|EEL79238.1| tRNA modification GTPase mnmE [Bacillus cereus AH1271] Length = 458 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P T +E+ L A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTD--LPQTID--MERVTEL-----AAGNRVITTSLIEEQGIDELEKAI 374 >gi|261367335|ref|ZP_05980218.1| ribosome-associated GTPase EngA [Subdoligranulum variabile DSM 15176] gi|282570094|gb|EFB75629.1| ribosome-associated GTPase EngA [Subdoligranulum variabile DSM 15176] Length = 447 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 29/188 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ LA + PG T+ F ++ K LV Sbjct: 4 PIVAIVGRPNVGKSTIFNKLTGQR-LAIVEDTPGVTRD-RIFCDCEWCGNK-----FLLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + +D GL+ ++ E++ + C+ ++ + +GV DQD+ Sbjct: 57 DTGGI------EPRIDD--GLLA-HMREQAQIAIDSADCIIMVTELTNGVTPQDQDIAGM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + + K DK+ E L Y E+IP S V G L Sbjct: 108 LMRSGKPVVLAVNKCDKIG--------EPPMELYDFYSLGLGEIIPVSGVHGHGTGDLLD 159 Query: 205 AILETINY 212 A+ +++ Sbjct: 160 AVCAHLDF 167 >gi|332288185|ref|YP_004419037.1| GTP-binding protein EngA [Gallibacterium anatis UMN179] gi|330431081|gb|AEC16140.1| GTP-binding protein EngA [Gallibacterium anatis UMN179] Length = 507 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A +N PG T+ + + + N ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVANFPGLTRD------RKYGQGQLNGTEFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G +D I ++E+S L V L+D R G+ D + + Sbjct: 56 DTGG----------IDGSEQGIEEKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIAQY 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L ++ + +V KID + + ++ Y E+ P ++ + +G+ L + Sbjct: 106 LRRREKTTVVVANKIDGIDADS---------HIGEFYQLGLGEITPIAASQGRGVTQLIQ 156 Query: 205 AIL 207 +L Sbjct: 157 DVL 159 >gi|153820092|ref|ZP_01972759.1| GTP-binding protein [Vibrio cholerae NCTC 8457] gi|126509362|gb|EAZ71956.1| GTP-binding protein [Vibrio cholerae NCTC 8457] Length = 129 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 1/102 (0%) Query: 107 WGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 W + YL +R +L+ + +L+D RH +K +DQ + + + + Q++LTK DKL Sbjct: 5 WQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQLIIWAVECGIPVQVMLTKADKLKSGA 64 Query: 167 AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K + + + V SS+ G++ LR + E Sbjct: 65 RKAQVLKVREEAKTF-GGDVAVDAFSSLSGIGVDTLRAKLDE 105 >gi|323706096|ref|ZP_08117665.1| ribosome-associated GTPase EngA [Thermoanaerobacterium xylanolyticum LX-11] gi|323534540|gb|EGB24322.1| ribosome-associated GTPase EngA [Thermoanaerobacterium xylanolyticum LX-11] Length = 439 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 11/133 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N + ++ ++ + PG T+ +F + LV Sbjct: 4 PMVGIVGRPNVGKSTLFNKITGQR-ISIVEDQPGVTRDRIYFETEWMDK------RFILV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + ++ + T+ + +ID + GV +D+D+ + L K Sbjct: 57 DTGGL----EPDSEDEFFSKIKMQVEAALKTVDLILFVIDGKEGVSPVDEDIAAMLRKSR 112 Query: 150 VSYQIVLTKIDKL 162 +VL K+D Sbjct: 113 KKVLLVLNKVDNF 125 >gi|322421095|ref|YP_004200318.1| ribosome-associated GTPase EngA [Geobacter sp. M18] gi|320127482|gb|ADW15042.1| ribosome-associated GTPase EngA [Geobacter sp. M18] Length = 440 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 25/138 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N LV R+ A + PG T+ N+ F +LP + LV Sbjct: 3 PIIAIVGRPNVGKSTLFNRLVGRRK-AMVDDMPGVTRDRNYAEVTRF-----DLPFI-LV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G+ + K +++ + E+S + ++D R G+ D+DV Sbjct: 56 DTGGFEPETSDK---------LLQQMREQSRFAMDEADLILFVMDARDGLTPADRDVVDM 106 Query: 145 LDK--KAVSYQIVLTKID 160 L + K V Y ++ K+D Sbjct: 107 LRRINKPVFY--IINKVD 122 >gi|71735846|ref|YP_273582.1| GTP-binding protein EngA [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487194|ref|ZP_05641235.1| GTP-binding protein EngA [Pseudomonas syringae pv. tabaci ATCC 11528] gi|123637657|sp|Q48LZ0|DER_PSE14 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71556399|gb|AAZ35610.1| GTP-binding protein engA [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322917|gb|EFW79007.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str. B076] gi|320329960|gb|EFW85948.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str. race 4] gi|330985018|gb|EGH83121.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009189|gb|EGH89245.1| GTP-binding protein Der [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 490 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 300 GFALEAGRALVIALNKWDGMTP 321 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ +V KID + E L + ++ P + IP + +GI ++L Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGISQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALRE 161 >gi|330969066|gb|EGH69132.1| GTP-binding protein Der [Pseudomonas syringae pv. aceris str. M302273PT] Length = 490 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 300 GFALEAGRALVIALNKWDGMTP 321 >gi|302185741|ref|ZP_07262414.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae 642] gi|330950783|gb|EGH51043.1| GTP-binding protein Der [Pseudomonas syringae Cit 7] Length = 490 Score = 43.1 bits (100), Expect = 0.026, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 300 GFALEAGRALVIALNKWDGMTP 321 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ +V KID + E L + ++ P + IP + +GI ++L Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGISQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALRE 161 >gi|289677942|ref|ZP_06498832.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae FF5] Length = 391 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 300 GFALEAGRALVIALNKWDGMTP 321 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ +V KID + E L + ++ P + IP + +GI ++L Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGISQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALRE 161 >gi|289626149|ref|ZP_06459103.1| GTP-binding protein EngA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649055|ref|ZP_06480398.1| GTP-binding protein EngA [Pseudomonas syringae pv. aesculi str. 2250] gi|298486027|ref|ZP_07004101.1| GTP-binding protein EngA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159504|gb|EFI00551.1| GTP-binding protein EngA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330869573|gb|EGH04282.1| GTP-binding protein Der [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 490 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 300 GFALEAGRALVIALNKWDGMTP 321 Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ +V KID + E L + ++ P + IP + +GI ++L Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGISQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALRE 161 >gi|150021499|ref|YP_001306853.1| GTP-binding protein EngA [Thermosipho melanesiensis BI429] gi|166225930|sp|A6LNG7|DER_THEM4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|149794020|gb|ABR31468.1| small GTP-binding protein [Thermosipho melanesiensis BI429] Length = 437 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 16/184 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 +A GR N GKS+L N ++ R+ A + PG T+ ++ V + N +D Sbjct: 182 VALIGRPNAGKSTLFNGILERER-ALVTPIPGTTRDAIDELV-------EINGKKYLFID 233 Query: 91 MPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G ++ K++D + VR + V +ID G+ DQ + + + Sbjct: 234 TAGLRRKSKVEYKSIDMYSN--VRSIKSIELSDVVVFVIDSLEGITHQDQKIAGIAENRG 291 Query: 150 VSYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V KID K QE +E ++ R Y ++ V+ S+ +R GI L KAI Sbjct: 292 KATVVVFNKIDLVKNFKYRKQEFIE--HFMERLYFVSYSPVVFVSAQERYGIGKLIKAIK 349 Query: 208 ETIN 211 E N Sbjct: 350 EAYN 353 >gi|28868645|ref|NP_791264.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato str. DC3000] gi|213971514|ref|ZP_03399625.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato T1] gi|301386119|ref|ZP_07234537.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato Max13] gi|302060181|ref|ZP_07251722.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato K40] gi|302135124|ref|ZP_07261114.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato NCPPB 1108] gi|37999588|sp|Q886Y6|DER_PSESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|28851883|gb|AAO54959.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato str. DC3000] gi|213923706|gb|EEB57290.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato T1] gi|330872875|gb|EGH07024.1| GTP-binding protein Der [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965919|gb|EGH66179.1| GTP-binding protein Der [Pseudomonas syringae pv. actinidiae str. M302091] gi|331019376|gb|EGH99432.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 489 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 188 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 240 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 241 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 299 GFALEAGRALVIALNKWDGMTP 320 Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ +V KID + E L + ++ P + IP + +GI ++L Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGISQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALRE 161 >gi|330957531|gb|EGH57791.1| GTP-binding protein Der [Pseudomonas syringae pv. maculicola str. ES4326] Length = 489 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 188 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 240 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 241 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 299 GFALEAGRALVIALNKWDGMTP 320 >gi|212710611|ref|ZP_03318739.1| hypothetical protein PROVALCAL_01677 [Providencia alcalifaciens DSM 30120] gi|212686692|gb|EEB46220.1| hypothetical protein PROVALCAL_01677 [Providencia alcalifaciens DSM 30120] Length = 492 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 9/140 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 201 PSTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRD-SIYIP-----MERDER 253 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 254 EYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 311 Query: 145 LDKKAVSYQIVLTKIDKLSP 164 + S I + K D + P Sbjct: 312 ILNAGRSLVIAVNKWDGMKP 331 >gi|29840678|ref|NP_829784.1| GTP-binding protein EngA [Chlamydophila caviae GPIC] gi|33301057|sp|Q821L7|DER_CHLCV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|29835028|gb|AAP05662.1| GTP-binding protein [Chlamydophila caviae GPIC] Length = 474 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 17/136 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL--KNNLPAM 86 P +IA GR NVGKSS+IN L+N + N PG T +D ++ +N + Sbjct: 211 PLKIALIGRPNVGKSSIINGLLNEERCI-IDNVPGTT--------RDNVDILYSHNDRSY 261 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSF 144 +D G ++ K +++ W I +E++ R L+ID +H + D+ + S Sbjct: 262 LFIDTAGLRKMKSVKNSIE-W---ISSSRTEKAIARADVCLLVIDAQHHLSSYDKRILSL 317 Query: 145 LDKKAVSYQIVLTKID 160 + K + I++ K D Sbjct: 318 ISKHKKPHIILVNKWD 333 >gi|330894498|gb|EGH27159.1| GTP-binding protein Der [Pseudomonas syringae pv. mori str. 301020] Length = 490 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 300 GFALEAGRALVIALNKWDGMTP 321 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIKEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ +V KID + E L + ++ P + IP + +GI ++L Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGISQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALRE 161 >gi|326797802|ref|YP_004315621.1| GTP-binding protein engA [Sphingobacterium sp. 21] gi|326548566|gb|ADZ76951.1| GTP-binding protein engA [Sphingobacterium sp. 21] Length = 433 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 29/187 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-----HLNFFVPKDFSNLKNNLP 84 P+ A GR NVGKSS IN L+ ++ T A G T+ H N F + Sbjct: 174 PKYAIVGRPNVGKSSFINALIGKERNIVTPIA-GTTRDSIQIHYNQFGHE---------- 222 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G K+N++ + ++R + V L+ID G++ D ++F Sbjct: 223 -FMLIDTAGLRRKTKVKENIEFYS--VMRTIKALEEADVVILMIDATEGLESQDVNIFHL 279 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-------YPTAHPEVIPTSSVKRK 197 +K +++ K D + +TL++ + IRN YP VI + K Sbjct: 280 AEKNKKGVVLLVNKWDLVDKD--HKTLKRFEEEIRNKTAPFTDYPIVFTSVIEKQRI-FK 336 Query: 198 GIEVLRK 204 IE K Sbjct: 337 AIEAATK 343 >gi|297562366|ref|YP_003681340.1| hypothetical protein Ndas_3429 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846814|gb|ADH68834.1| hypothetical protein Ndas_3429 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 802 Score = 43.1 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 32/56 (57%) Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 VL ++DK+ P +E L + L+ HP VI TS++ +GI LR+ + ET+ Sbjct: 455 VLNQVDKVEPAELEELLTDLRRLLETESGVHPRVITTSTLTGQGIRDLREFLAETV 510 >gi|66044500|ref|YP_234341.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae B728a] gi|81308464|sp|Q4ZX19|DER_PSEU2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|63255207|gb|AAY36303.1| Small GTP-binding protein domain:GTP-binding [Pseudomonas syringae pv. syringae B728a] Length = 490 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 300 GFALEAGRALVIALNKWDGMTP 321 Score = 38.1 bits (87), Expect = 0.90, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ +V KID + E L + ++ P + IP + +GI ++L Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGISQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALRE 161 >gi|330791039|ref|XP_003283602.1| hypothetical protein DICPUDRAFT_6420 [Dictyostelium purpureum] gi|325086462|gb|EGC39851.1| hypothetical protein DICPUDRAFT_6420 [Dictyostelium purpureum] Length = 461 Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 8/133 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 GP I+ G+ N GKSSL+N +++ + + S+ PG T P D + L + + Sbjct: 194 GPIRISIVGKPNAGKSSLLNKIIDEQR-SIVSDIPGTTHD-----PVDCNFLWRDKHELC 247 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD G K ++ L E+S V+L+ID G+ D + SF+ + Sbjct: 248 LVDTAGIRRRSTHKVGLEKSSVLWALKSIEKS--HVVFLVIDATVGITDQDLKIASFIME 305 Query: 148 KAVSYQIVLTKID 160 S I++ K D Sbjct: 306 NRKSCIILVNKWD 318 >gi|110798867|ref|YP_696695.1| GTP-binding protein Era [Clostridium perfringens ATCC 13124] gi|123148605|sp|Q0TNU5|ERA_CLOP1 RecName: Full=GTPase Era gi|110673514|gb|ABG82501.1| GTP-binding protein Era [Clostridium perfringens ATCC 13124] Length = 296 Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 I GR NVGKS+L N+L+ K L+ SN P T++ +D+ M V Sbjct: 7 ITIVGRPNVGKSTLTNLLMGEK-LSIVSNKPQTTRNNIQTILTGEDYQ--------MIFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG PK + + ++ + V L + V + D+ + L + Sbjct: 58 DTPG---IHKPKHKLGEY--MVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 VL K+D+ SP +TLE + Y A E+IP S++K K + L Sbjct: 113 APVIFVLNKVDESSPEKVAKTLE---LFSKEYDFA--EMIPISAMKAKNTDKL 160 >gi|330975909|gb|EGH75975.1| GTP-binding protein Der [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 490 Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 300 GFALEAGRALVIALNKWDGMTP 321 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTR------DRQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ +V KID + E L + ++ P + IP + +GI ++L Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGISQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALRE 161 >gi|237807666|ref|YP_002892106.1| small GTP-binding protein [Tolumonas auensis DSM 9187] gi|259645887|sp|C4LC41|DER_TOLAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|237499927|gb|ACQ92520.1| small GTP-binding protein [Tolumonas auensis DSM 9187] Length = 498 Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 13/147 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + A GR NVGKS+L N ++ + + PG T+ + ++P L+ + + Sbjct: 211 PIKFAIIGRPNVGKSTLTNRMLGEDRVI-VYDLPGTTRD-SIYIP-----LERDDQHYIV 263 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + +V+ L V LLID R GV D + F Sbjct: 264 IDTAGVRKKKKIYETVEKFS--VVKTLQAIEDANVVLLLIDAREGVSDQDLSLLGFTLHS 321 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTK 175 S I + K D L Q+T EK K Sbjct: 322 GRSIVIAVNKWDGLD----QDTKEKIK 344 >gi|261856783|ref|YP_003264066.1| ribosome-associated GTPase EngA [Halothiobacillus neapolitanus c2] gi|261837252|gb|ACX97019.1| ribosome-associated GTPase EngA [Halothiobacillus neapolitanus c2] Length = 567 Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 27/181 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + R A ++ G T+ + + + ++ ++ Sbjct: 3 PVIALVGRPNVGKSTLFNQMT-RSRAALVADYAGLTRD------RQYGSAEHEGRDFIVI 55 Query: 90 DMPGYGYARAPKKNV---DSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G R + + +W + CV ++D R G+ DQ++ L Sbjct: 56 DTGGLTGERGGIEALMQDQAWAAI--------EEADCVVFMVDARAGLTVADQEIAEKLR 107 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + Q+V+ K+D + + Q + E + T++ +GI L A+ Sbjct: 108 RSSKPIQLVVNKVDGVDESLVQAEFARLGL---------GEPVFTTASHGRGISTLWDAV 158 Query: 207 L 207 L Sbjct: 159 L 159 >gi|170287887|ref|YP_001738125.1| GTP-binding protein Era [Thermotoga sp. RQ2] gi|170175390|gb|ACB08442.1| GTP-binding protein Era [Thermotoga sp. RQ2] Length = 301 Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 23/177 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LN-FFVPKDFSNLKNNLPAMALV 89 +A +G+ NVGKS+ IN+++ RK + S+ P T++ +N + KD + V Sbjct: 9 VALAGKPNVGKSTFINVVMGRK-VVIVSDKPQTTRNRINCIYTDKD--------SQIIFV 59 Query: 90 DMPGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG K + G +V+ + + + ++D G + D+ V +++ Sbjct: 60 DTPGI------HKPLHRLGEYMVKAAVQALKGVDLILFMLDAADGFTKTDEHVAEIVNES 113 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLRK 204 I + KID A+ + K ++ N + H S++K +G+ EVL K Sbjct: 114 GTKTIIAVNKIDVAGEEKAKAVGQLAKSMVENVVSVH----YISALKGEGVFEVLEK 166 >gi|330936977|gb|EGH41077.1| GTP-binding protein Der [Pseudomonas syringae pv. pisi str. 1704B] Length = 334 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D ++P Sbjct: 300 GFALEAGRALVIALNKWDGMTP 321 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 31/175 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L K+ +V KID + E L + ++ P + IP + +GI Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGI 151 >gi|114566850|ref|YP_754004.1| hypothetical protein Swol_1325 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337785|gb|ABI68633.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 441 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 9/130 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKSSL+N L+ + + S+ PG T+ P F +N L L+D Sbjct: 177 KIAIVGRPNVGKSSLVNALLGEERVI-VSDVPGTTRDA-IDTPFQFKG-QNYL----LID 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ + + ++R L V +++D GV + D+ + ++ +++ Sbjct: 230 TAGMRRKSRIKETTERYS--VIRTLKAIERADVVLIMLDATEGVAEQDKKIAGYVHEQSR 287 Query: 151 SYQIVLTKID 160 + IV+ K D Sbjct: 288 ANIIVVNKWD 297 >gi|58426746|gb|AAW75783.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 490 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 20/177 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + L P + +V Sbjct: 28 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR----LDEQQPFI-VV 81 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + R + + L V ++D R G +D ++ ++L K A Sbjct: 82 DTGGIA---GDEDGLAGATARQARAAAGEADL--VLFVVDGREGESSLDDEILAWLRKLA 136 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KID T + + + +V+ S+ R+GI+ L + + Sbjct: 137 RPTVLVINKIDGTDEETVRSEFARYGF---------SDVVALSAAHRQGIDELLEEV 184 >gi|325106044|ref|YP_004275698.1| ribosome-associated GTPase EngA [Pedobacter saltans DSM 12145] gi|324974892|gb|ADY53876.1| ribosome-associated GTPase EngA [Pedobacter saltans DSM 12145] Length = 433 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 17/135 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNR-KNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPA 85 P A GR NVGKSS+IN L+ + +N+ +N G T+ H+++ K F + Sbjct: 174 PVYAIVGRPNVGKSSMINALLGKDRNIV--TNVAGTTRDSIHIHY---KQFGH------D 222 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++N++ + ++R + + L++D G++ D ++F Sbjct: 223 FMLVDTAGLRKKTKVRENIEFYS--VMRTIGALEEADVIILMLDATEGIESQDINIFHLA 280 Query: 146 DKKAVSYQIVLTKID 160 +K +V+ K D Sbjct: 281 EKNRKGLVLVVNKWD 295 >gi|242398702|ref|YP_002994126.1| Probable GTP-binding protein [Thermococcus sibiricus MM 739] gi|242265095|gb|ACS89777.1| Probable GTP-binding protein [Thermococcus sibiricus MM 739] Length = 190 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 28/194 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L + + PG T+ ++ +VDM Sbjct: 2 IIFVGRSNVGKSTLIFRLTGK--YVKRGKRPGITR----------KPIEIGWRGKTIVDM 49 Query: 92 PGYGY-ARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCRHGVK-----------QID 138 PG+G+ + PK + IV+++ + + L+ID + ++ ID Sbjct: 50 PGFGFMSGVPKYIQEKIKTEIVQFIENNADKIETAVLVIDGKSALEIIERWEKRGEIPID 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLS--PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + F FL + + + + K+DK+ T +EK L+ + +P S+ Sbjct: 110 VEFFQFLQELEIPIIVAVNKMDKIKNLNLTINRLIEKFG-LLGTWEDYKDIFVPISAKFG 168 Query: 197 KGIEVLRKAILETI 210 I+ LRK I + I Sbjct: 169 TNIQELRKLIEKNI 182 >gi|227874779|ref|ZP_03992932.1| GTP-binding protein Era [Mobiluncus mulieris ATCC 35243] gi|227844554|gb|EEJ54710.1| GTP-binding protein Era [Mobiluncus mulieris ATCC 35243] Length = 303 Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 28/177 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN +V RK +A TS P T+H++ + + + LVD Sbjct: 19 VAVLGRPNVGKSTLINEMVGRK-IAITSARPETTRHVSRGI------VHRPGFQLVLVDT 71 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER--STLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG R L+ + L++R V LL+ C ++I ++K+ Sbjct: 72 PGIHRPRT----------LLGQRLNDRVEEAQADVDLLVFCVPADQEIGPGDRRIVEKQL 121 Query: 150 VSYQI----VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +I V+TK D +P L L N E++P S+V+ K +E+L Sbjct: 122 RANRIPALAVVTKTDVATPNQIAAQL-----LALNELYDFREIVPVSAVQGKQVELL 173 >gi|161507651|ref|YP_001577605.1| GTP-binding protein Era [Lactobacillus helveticus DPC 4571] gi|254783658|sp|A8YVM7|ERA_LACH4 RecName: Full=GTPase Era gi|160348640|gb|ABX27314.1| GTP-binding protein [Lactobacillus helveticus DPC 4571] Length = 301 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + +++ K + VD Sbjct: 11 VALLGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNR---ISGIYTSDKMQV---VFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + + LS + + V +++ + + DQ + + L + V Sbjct: 64 PG---IFKPHSKLDDY--MDKASLSSLNDVDLVLFMVEPEE-IGKGDQYIANLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K+D++ P ++ L E++P S+ + GIE L L TIN Sbjct: 118 VFLVINKVDQIHPNKLLLIMDSYHKL-----EGFKEILPISATQGIGIEDL----LNTIN 168 >gi|28899345|ref|NP_798950.1| GTP-binding protein Era [Vibrio parahaemolyticus RIMD 2210633] gi|153839957|ref|ZP_01992624.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ3810] gi|260365942|ref|ZP_05778432.1| GTP-binding protein Era [Vibrio parahaemolyticus K5030] gi|260878964|ref|ZP_05891319.1| GTP-binding protein Era [Vibrio parahaemolyticus AN-5034] gi|260898319|ref|ZP_05906815.1| GTP-binding protein Era [Vibrio parahaemolyticus Peru-466] gi|260899640|ref|ZP_05908035.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ4037] gi|31340053|sp|Q87LP0|ERA_VIBPA RecName: Full=GTPase Era gi|28807581|dbj|BAC60834.1| GTP-binding protein Era [Vibrio parahaemolyticus RIMD 2210633] gi|149746516|gb|EDM57505.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ3810] gi|308085246|gb|EFO34941.1| GTP-binding protein Era [Vibrio parahaemolyticus Peru-466] gi|308090470|gb|EFO40165.1| GTP-binding protein Era [Vibrio parahaemolyticus AN-5034] gi|308110555|gb|EFO48095.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ4037] gi|308113214|gb|EFO50754.1| GTP-binding protein Era [Vibrio parahaemolyticus K5030] Length = 320 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 28/181 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D + A+ VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD-----GDYQAI-YVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H K D+ V + L K Sbjct: 82 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTKD-DEMVLTKLQKSNF 135 Query: 151 SYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D + E +K ++ +V+P S+ + K I+VLRK Sbjct: 136 PVVLCVNKVDNVQDRNEVMLHMAEMSKKMDFV---------DVVPISAKQGKNIDVLRKH 186 Query: 206 I 206 + Sbjct: 187 V 187 >gi|212697394|ref|ZP_03305522.1| hypothetical protein ANHYDRO_01964 [Anaerococcus hydrogenalis DSM 7454] gi|212675586|gb|EEB35193.1| hypothetical protein ANHYDRO_01964 [Anaerococcus hydrogenalis DSM 7454] Length = 454 Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 27/187 (14%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G L K G E G+ NVGKSSL+N+L+N +N A ++ PG T+ ++ NL N Sbjct: 214 GKLVKDGI-ETTIIGKPNVGKSSLLNVLLN-ENRAIVTDIPGTTRD----SITEYINLGN 267 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + + D G R V+ G + L++ + L + + D + + D+ + Sbjct: 268 --LTLKINDTAGI---RETHDEVEKIGVQRSKELAQGADL--IIAIFDRSREIDEEDKII 320 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L K + I+L KID L ++E ++ N+ +I TS V R GI+ Sbjct: 321 LDLL--KGKNAIIILNKID-LDSKISKEDFDE------NFT-----IIETSMVSRDGIDK 366 Query: 202 LRKAILE 208 L AI + Sbjct: 367 LEGAIFD 373 >gi|254230525|ref|ZP_04923896.1| GTP-binding protein Era [Vibrio sp. Ex25] gi|262393271|ref|YP_003285125.1| GTP-binding protein Era [Vibrio sp. Ex25] gi|151936950|gb|EDN55837.1| GTP-binding protein Era [Vibrio sp. Ex25] gi|262336865|gb|ACY50660.1| GTP-binding protein Era [Vibrio sp. Ex25] Length = 320 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 28/181 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D + A+ VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD-----GDYQAI-YVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H K D+ V + L K Sbjct: 82 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTKD-DEMVLTKLQKSNF 135 Query: 151 SYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D + E +K ++ +V+P S+ + K I+VLRK Sbjct: 136 PVVLCVNKVDNVQDRNEVMLHMAEMSKKMDFV---------DVVPISAKQGKNIDVLRKH 186 Query: 206 I 206 + Sbjct: 187 V 187 >gi|319787003|ref|YP_004146478.1| ribosome-associated GTPase EngA [Pseudoxanthomonas suwonensis 11-1] gi|317465515|gb|ADV27247.1| ribosome-associated GTPase EngA [Pseudoxanthomonas suwonensis 11-1] Length = 465 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 24/183 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + L + P + LV Sbjct: 3 PLVALVGRPNVGKSTLFNALTRSRD-ALVHDEPGVTRDRHYGVCR----LDPDRPFL-LV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + R + + L + ++D R G +D ++ S+L K A Sbjct: 57 DTGGIA---GDEEGLAGATARQARAAAAEADL--ILFVVDGREGTSALDDEILSWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETL--EKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID T +E + E +Y +++ S+ R+G++ L +L Sbjct: 112 RPTLLVVNKID----GTFEEAVRGEFARY-------GFADMLAVSAAHRQGLDDLHAEVL 160 Query: 208 ETI 210 E + Sbjct: 161 ERL 163 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IAF GR NVGKS+L+N ++ + + S PG T+ + V +L+ + L+D Sbjct: 181 IAFVGRPNVGKSTLVNRVLGEERMI-ASEVPGTTRD-SIAV-----DLERDGRLYRLIDT 233 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ V+ + +V+ L + L++D GV D V + + Sbjct: 234 AGIRRKGKIEEAVEKFS--VVKTLQAIERCQVAVLMLDATEGVTDQDATVLGAVLDAGRA 291 Query: 152 YQIVLTKIDKLS 163 I + K D L+ Sbjct: 292 LVIAVNKWDGLT 303 >gi|261345330|ref|ZP_05972974.1| ribosome-associated GTPase EngA [Providencia rustigianii DSM 4541] gi|282566664|gb|EFB72199.1| ribosome-associated GTPase EngA [Providencia rustigianii DSM 4541] Length = 491 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 9/140 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 200 PSTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRD-SIYIP-----MERDER 252 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 253 EYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 310 Query: 145 LDKKAVSYQIVLTKIDKLSP 164 + S I + K D + P Sbjct: 311 ILNAGRSLVIAVNKWDGMKP 330 >gi|194246565|ref|YP_002004204.1| tRNA modification GTPase TrmE [Candidatus Phytoplasma mali] gi|193806922|emb|CAP18351.1| tRNA modification GTPase [Candidatus Phytoplasma mali] Length = 452 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 32/182 (17%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA--L 88 E GR NVGKSSL+N + + + S+ PG T +DF ++ NL + L Sbjct: 221 ETLIIGRPNVGKSSLLNFFLEEER-SIVSDIPGTT--------RDFVDVYFNLQGITLHL 271 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G R + ++ G L + L +++ L V L++D + ++ D+++ + K Sbjct: 272 IDTAG---VREAEDKIEKIGVLKTKQLLKKAEL--VLLVLDQNNCLQSEDKELLNL--TK 324 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ K D + Q+ E E+I S++++KG+E+L+ IL+ Sbjct: 325 DYPRILIGNKSDLKTKIEKQQLTE--------------EIIFISTIEKKGLELLKNNILK 370 Query: 209 TI 210 + Sbjct: 371 IL 372 >gi|254179556|ref|ZP_04886155.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655] gi|184210096|gb|EDU07139.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655] Length = 445 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKHYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 292 ALVVGVNKWDGLDPHVRERT 311 >gi|213021569|ref|ZP_03336016.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 107 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 1/91 (1%) Query: 116 SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +R +L+ + +L+D RH +K +DQ + + + + ++LTK DKL+ + L + Sbjct: 1 EKRQSLQGLVVLMDIRHPLKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVR 60 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + +V SS+K++G++ LR+ + Sbjct: 61 EAVLAF-NGDVQVEAFSSLKKQGVDKLRQKL 90 >gi|254445513|ref|ZP_05058989.1| GTPase, putative [Verrucomicrobiae bacterium DG1235] gi|198259821|gb|EDY84129.1| GTPase, putative [Verrucomicrobiae bacterium DG1235] Length = 468 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS L N L K ++ + PG T+ + + +D + L+D Sbjct: 5 VAIVGRPNVGKSRLFNRLAG-KRISIVHDMPGVTRDI---ITRDLDD------GYTLMDT 54 Query: 92 PGYGYARA----PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 G G P K VD+ G I + + + L + ++D R G+ +D+ + L K Sbjct: 55 GGMGLVEGMSDTPGKIVDAVEGQI-EFSIDAANL--ILFVVDGREGLMPLDKQMAERLRK 111 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D T Q + + ++ Y P ++ S+ +G+ LR+ +L Sbjct: 112 GEKRVILVINKVD-----TEQTAINEKEFY--RYGFGEPHLV--SAEHGRGMNTLRREVL 162 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 15/145 (10%) Query: 27 AGPP-----------EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 AGPP ++ F GR NVGKSSL N LV + S+ PG T+ + +P Sbjct: 169 AGPPIEEEDDGKKVLKVCFIGRPNVGKSSLSNCLVQSERFI-VSDVPGTTRD-SIEMPFV 226 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + + + L D G +V+ + VR L + V+++ID + G Sbjct: 227 WKSKRGEDWHFMLTDTAGIRKQTKLNSSVEYFSR--VRSLDAIRDVDVVFMVIDAKEGPT 284 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKID 160 D+ + K IV+ K D Sbjct: 285 NQDKAIAGEATKANKPVVIVVNKWD 309 >gi|84624044|ref|YP_451416.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|161898989|ref|YP_201168.2| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae KACC10331] gi|188576711|ref|YP_001913640.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576902|ref|YP_001913831.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae PXO99A] gi|123752759|sp|Q2P2T5|DER_XANOM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|84367984|dbj|BAE69142.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521163|gb|ACD59108.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521354|gb|ACD59299.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 465 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 20/177 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + L P + +V Sbjct: 3 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR----LDEQQPFI-VV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + R + + L V ++D R G +D ++ ++L K A Sbjct: 57 DTGGIA---GDEDGLAGATARQARAAAGEADL--VLFVVDGREGESSLDDEILAWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KID T + + + +V+ S+ R+GI+ L + + Sbjct: 112 RPTVLVINKIDGTDEETVRSEFARYGF---------SDVVALSAAHRQGIDELLEEV 159 >gi|168335124|ref|ZP_02693232.1| GTP-binding protein Era [Epulopiscium sp. 'N.t. morphotype B'] Length = 303 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 27/180 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 I+ GR+NVGKS+L+N LV K +A SN P T+H DF + + Sbjct: 10 ISIIGRANVGKSTLMNRLVGEK-IAIMSNKPQTTRHQVRTILTTNDFQAV--------FI 60 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLD 146 D PG P + G +V+ + +TL + LI+ + ++D+++ S L Sbjct: 61 DTPGI---HTPNTEL---GKFMVK--AAHTTLNEVDIILFLIETDTRIGKLDEEIISKLK 112 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + KID P +++E K EVIP S+ + ++ L I Sbjct: 113 SVNSAVFLCINKIDGKDPQEVIDSIECYK-----DSMDFAEVIPISAYEGTNVDALIHCI 167 >gi|108804275|ref|YP_644212.1| small GTP-binding protein domain-containing protein [Rubrobacter xylanophilus DSM 9941] gi|108765518|gb|ABG04400.1| Small GTP-binding protein domain [Rubrobacter xylanophilus DSM 9941] Length = 437 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 11/173 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS-NLKNNLPAMALVD 90 IA GR NVGKS+L+N L+ + A S A G T + V + L AL+D Sbjct: 182 IAIIGRPNVGKSTLLNRLLGEQR-AVVSEAAGTTTDV---VESEVEVQLDGGRERFALLD 237 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G G + V + L RS+ L++D G+ D + +++ Sbjct: 238 TAGVGKRTHRAQGVPYYSALRTAEAIRRSS--VALLVVDAAEGLVAGDLQLARQVEEAGR 295 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVL 202 S ++L K D + P +E E+ + P P V+ S++ G+ EVL Sbjct: 296 SLGVLLNKRDLVPPERLREVQEQAAARL---PDLKPPVLGVSALTGAGVGEVL 345 >gi|53719151|ref|YP_108137.1| GTP-binding protein EngA [Burkholderia pseudomallei K96243] gi|124383522|ref|YP_001026075.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10229] gi|126439512|ref|YP_001059220.1| GTP-binding protein EngA [Burkholderia pseudomallei 668] gi|126449445|ref|YP_001080656.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10247] gi|126454834|ref|YP_001066487.1| GTP-binding protein EngA [Burkholderia pseudomallei 1106a] gi|161579520|ref|YP_103001.2| GTP-binding protein EngA [Burkholderia mallei ATCC 23344] gi|162210023|ref|YP_333745.2| GTP-binding protein EngA [Burkholderia pseudomallei 1710b] gi|167719273|ref|ZP_02402509.1| GTP-binding protein EngA [Burkholderia pseudomallei DM98] gi|167738270|ref|ZP_02411044.1| GTP-binding protein EngA [Burkholderia pseudomallei 14] gi|167815459|ref|ZP_02447139.1| GTP-binding protein EngA [Burkholderia pseudomallei 91] gi|167823871|ref|ZP_02455342.1| GTP-binding protein EngA [Burkholderia pseudomallei 9] gi|167845410|ref|ZP_02470918.1| GTP-binding protein EngA [Burkholderia pseudomallei B7210] gi|167902402|ref|ZP_02489607.1| GTP-binding protein EngA [Burkholderia pseudomallei NCTC 13177] gi|167910644|ref|ZP_02497735.1| GTP-binding protein EngA [Burkholderia pseudomallei 112] gi|167918673|ref|ZP_02505764.1| GTP-binding protein EngA [Burkholderia pseudomallei BCC215] gi|254177966|ref|ZP_04884621.1| GTPase family protein [Burkholderia mallei ATCC 10399] gi|254189054|ref|ZP_04895565.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237] gi|254259698|ref|ZP_04950752.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a] gi|254297432|ref|ZP_04964885.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e] gi|254358306|ref|ZP_04974579.1| GTP-binding protein EngA [Burkholderia mallei 2002721280] gi|81824774|sp|Q63US9|DER_BURPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224313|sp|A3MK70|DER_BURM7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224314|sp|A2S2A6|DER_BURM9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224315|sp|A3NVW6|DER_BURP0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224316|sp|A3NA49|DER_BURP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|52209565|emb|CAH35518.1| putative GTPase [Burkholderia pseudomallei K96243] gi|124291542|gb|ABN00811.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10229] gi|126219005|gb|ABN82511.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 668] gi|126228476|gb|ABN92016.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106a] gi|126242315|gb|ABO05408.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10247] gi|148027433|gb|EDK85454.1| GTP-binding protein EngA [Burkholderia mallei 2002721280] gi|157808014|gb|EDO85184.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e] gi|157936733|gb|EDO92403.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237] gi|160699005|gb|EDP88975.1| GTPase family protein [Burkholderia mallei ATCC 10399] gi|254218387|gb|EET07771.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a] Length = 445 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKHYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 292 ALVVGVNKWDGLDPHVRERT 311 >gi|328474122|gb|EGF44927.1| GTPase Era [Vibrio parahaemolyticus 10329] Length = 303 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 28/181 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D + A+ VD Sbjct: 12 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD-----GDYQAI-YVDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H K D+ V + L K Sbjct: 65 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTKD-DEMVLTKLQKSNF 118 Query: 151 SYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D + E +K ++ +V+P S+ + K I+VLRK Sbjct: 119 PVVLCVNKVDNVQDRNEVMLHMAEMSKKMDFV---------DVVPISAKQGKNIDVLRKH 169 Query: 206 I 206 + Sbjct: 170 V 170 >gi|71274463|ref|ZP_00650751.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era [Xylella fastidiosa Dixon] gi|71901684|ref|ZP_00683760.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era [Xylella fastidiosa Ann-1] gi|170730565|ref|YP_001775998.1| GTP-binding protein Era [Xylella fastidiosa M12] gi|226741406|sp|B0U3D9|ERA_XYLFM RecName: Full=GTPase Era gi|71164195|gb|EAO13909.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era [Xylella fastidiosa Dixon] gi|71728554|gb|EAO30709.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era [Xylella fastidiosa Ann-1] gi|167965358|gb|ACA12368.1| GTP binding protein [Xylella fastidiosa M12] Length = 298 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 26/181 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 IA GR NVGKS+L N LV K ++ SN P T+H + P + LV Sbjct: 12 IAVIGRPNVGKSTLTNALVGTK-ISIVSNRPQTTRHRLLGIA--------TFPEGQIVLV 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV---YLLIDCRHGVKQIDQDVFSFLD 146 D PG + N L+ R + R +L V L+ + H ++ D ++ L+ Sbjct: 63 DTPGLHREQKHPMN-----RLMNR--TARGSLEDVDAALLVTESTHWNEE-DTLAYNLLN 114 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V+ KID+ +A L + T HP S++KRKG+E L + Sbjct: 115 DTGIPVVLVINKIDRFKDKSALLPLLTHINENHTFATIHP----VSALKRKGLETLVSDL 170 Query: 207 L 207 L Sbjct: 171 L 171 >gi|256810716|ref|YP_003128085.1| ferrous iron transport protein B [Methanocaldococcus fervens AG86] gi|256793916|gb|ACV24585.1| ferrous iron transport protein B [Methanocaldococcus fervens AG86] Length = 669 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 29/184 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIA G NVGKS+L N L N PG T V K + N +VD Sbjct: 6 EIALIGNPNVGKSTLFNALTGEN--VYIGNWPGVT------VEKKEGEFEYNGKKFKVVD 57 Query: 91 MPGYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD-- 146 +PG A DS +I R ++E+ L V + D ++++++ L Sbjct: 58 LPGVYSLTA-----DSIDEIIARDYIINEKPDL--VVNIADAT----ALERNLYLTLQLM 106 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + +VL K+D + + + K + ++ +V+P S+VK+ GIE L+KAI Sbjct: 107 EMGANILLVLNKMDLANKLGMEIDINKLEKIL------GIKVVPISAVKKIGIEDLKKAI 160 Query: 207 LETI 210 LET+ Sbjct: 161 LETV 164 >gi|224097032|ref|XP_002310817.1| predicted protein [Populus trichocarpa] gi|222853720|gb|EEE91267.1| predicted protein [Populus trichocarpa] Length = 414 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G+ NVGKS+L N ++ +K L+ ++ P T+H L D+ M L Sbjct: 119 VAVVGKPNVGKSTLSNQMIGQK-LSIVTDKPQTTRHRILGICSAPDYQ--------MILY 169 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD--K 147 D PG + K +DS VR S CV +++D ++ID+ + + K Sbjct: 170 DTPGVIEKKMHK--LDSMMMKNVR--SAAINADCVLVIVDACRAPEKIDEMLEEGVGNLK 225 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V +VL K D + P + LE + T EVIP S+ +G+E +++ IL Sbjct: 226 DNVPTLLVLNKKDLIKPGEIAKKLEWYEKF-----TGVDEVIPVSAKFGQGVEDIKEWIL 280 >gi|134299998|ref|YP_001113494.1| small GTP-binding protein [Desulfotomaculum reducens MI-1] gi|134052698|gb|ABO50669.1| iron-only hydrogenase maturation protein HydF [Desulfotomaculum reducens MI-1] Length = 409 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 32/191 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR N GKSSLIN L + +++A SN PG T + LP Sbjct: 5 PRGNRLHIAIFGRRNAGKSSLINALTS-QDIAVVSNIPGTTTDPVY-------KAMEILP 56 Query: 85 A--MALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQID 138 + ++D G +D G L + R + + V L+ID GV + Sbjct: 57 VGPVVIIDTAG----------IDDSGDLGELRVKRSMDVLNKADMVLLVIDAGSGVTDYE 106 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + +K + +V KID T Q KT+ A P V+ S++ +G Sbjct: 107 LKIARRCQEKKLPVVVVFNKIDAHHVTEQQIEEAKTQL-------AGPTVV-VSALNGQG 158 Query: 199 IEVLRKAILET 209 I L+ AI+ T Sbjct: 159 IGDLKIAIVNT 169 >gi|90424140|ref|YP_532510.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB18] gi|90106154|gb|ABD88191.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB18] Length = 320 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 42/195 (21%) Query: 27 AGPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 AGP E +A G NVGKS+L+N LV K + + V +D + + Sbjct: 20 AGPVETRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEDHAQI-- 77 Query: 82 NLPAMALVDMPGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD PG PK+ +D +W G + + L CV L+D R G+ Sbjct: 78 -----ILVDTPGIFL---PKRRLDRAMVKTAWSG------AHDADLVCV--LLDAREGID 121 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT----AQETLEKTKYLIRNYPTAHPEVIPT 191 + + + L + +V+ K+D +S AQ E+ K+ E Sbjct: 122 EEADAILTKLSQVNHPKILVINKVDIVSKEKLLKLAQSANERLKF---------DETFMV 172 Query: 192 SSVKRKGIEVLRKAI 206 S++ G+E LRK++ Sbjct: 173 SALSGDGVEDLRKSL 187 >gi|167893952|ref|ZP_02481354.1| GTP-binding protein EngA [Burkholderia pseudomallei 7894] Length = 454 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 169 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKHYTLID 221 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 222 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 279 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 280 ALVVGVNKWDGLDPHVRERT 299 >gi|189467536|ref|ZP_03016321.1| hypothetical protein BACINT_03926 [Bacteroides intestinalis DSM 17393] gi|189435800|gb|EDV04785.1| hypothetical protein BACINT_03926 [Bacteroides intestinalis DSM 17393] Length = 466 Score = 42.7 bits (99), Expect = 0.034, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 23/194 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D +N+ Sbjct: 215 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTTNIG 268 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ- 139 +D G R ++S G I R + V +ID Q++Q Sbjct: 269 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLEQAEIVLWMIDATDATSQMNQL 321 Query: 140 --DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + L++K + +V K D + E L +I P A E I S+ KR+ Sbjct: 322 SGQILPRLERKHLI--LVFNKSDLSGTAHSDEVLSAASSII---PDA--ECIFISAKKRQ 374 Query: 198 GIEVLRKAILETIN 211 +VL+K ++ N Sbjct: 375 NTDVLQKKLIAAAN 388 >gi|21231435|ref|NP_637352.1| GTP-binding protein EngA [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768511|ref|YP_243273.1| GTP-binding protein EngA [Xanthomonas campestris pv. campestris str. 8004] gi|188991681|ref|YP_001903691.1| GTP-binding protein EngA [Xanthomonas campestris pv. campestris str. B100] gi|26006714|sp|Q8P979|DER_XANCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|81305517|sp|Q4UUM0|DER_XANC8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|229807529|sp|B0RT56|DER_XANCB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|21113105|gb|AAM41276.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573843|gb|AAY49253.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733441|emb|CAP51642.1| GTP-binding protein, probable [Xanthomonas campestris pv. campestris] Length = 465 Score = 42.7 bits (99), Expect = 0.034, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + L P + +V Sbjct: 3 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR----LDEQQPFI-VV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + R + + L V ++D R G +D ++ ++L K A Sbjct: 57 DTGGIA---GDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ KID + + + + +V+ S+ R+GI+ L Sbjct: 112 RPTVLVINKIDGTDEESVRSEFSRYGF---------SDVVALSAAHRQGIDDL 155 >gi|330807651|ref|YP_004352113.1| GTP-binding protein engA [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375759|gb|AEA67109.1| GTP-binding protein engA [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 490 Score = 42.7 bits (99), Expect = 0.034, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 72/185 (38%), Gaps = 31/185 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A + G T+ + + K LV Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRTYILV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D + G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K+ +V K+D + P A+ P + IP + +GI + K Sbjct: 106 LRKRNKRSYVVANKVDNIDPDMARAEFA---------PLGMGQAIPIAGAHGRGITQMLK 156 Query: 205 AILET 209 LE+ Sbjct: 157 IALES 161 Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDQPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 EEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSPT 165 F + + I + K D ++P+ Sbjct: 300 GFALEAGRALVIAINKWDGMTPS 322 >gi|121598397|ref|YP_993149.1| GTP-binding protein EngA [Burkholderia mallei SAVP1] gi|217421388|ref|ZP_03452892.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576] gi|237812544|ref|YP_002896995.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei MSHR346] gi|238563546|ref|ZP_00438709.2| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4] gi|242314802|ref|ZP_04813818.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b] gi|251767656|ref|ZP_02268028.2| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20] gi|254197870|ref|ZP_04904292.1| GTP-binding protein EngA [Burkholderia pseudomallei S13] gi|254199946|ref|ZP_04906312.1| GTP-binding protein EngA [Burkholderia mallei FMH] gi|254206279|ref|ZP_04912631.1| GTP-binding protein EngA [Burkholderia mallei JHU] gi|52426961|gb|AAU47554.1| GTPase family protein [Burkholderia mallei ATCC 23344] gi|76581515|gb|ABA50990.1| GTPase family protein [Burkholderia pseudomallei 1710b] gi|121227207|gb|ABM49725.1| GTPase family protein [Burkholderia mallei SAVP1] gi|147749542|gb|EDK56616.1| GTP-binding protein EngA [Burkholderia mallei FMH] gi|147753722|gb|EDK60787.1| GTP-binding protein EngA [Burkholderia mallei JHU] gi|169654611|gb|EDS87304.1| GTP-binding protein EngA [Burkholderia pseudomallei S13] gi|217395130|gb|EEC35148.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576] gi|237503777|gb|ACQ96095.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei MSHR346] gi|238520490|gb|EEP83949.1| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4] gi|242138041|gb|EES24443.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b] gi|243062055|gb|EES44241.1| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20] Length = 460 Score = 42.7 bits (99), Expect = 0.034, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 196 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKHYTLID 248 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 249 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 306 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 307 ALVVGVNKWDGLDPHVRERT 326 >gi|50085654|ref|YP_047164.1| GTP-binding protein Era [Acinetobacter sp. ADP1] gi|49531630|emb|CAG69342.1| GTP-binding protein,16S rRNA-binding, ribosome-associated GTPase [Acinetobacter sp. ADP1] Length = 345 Score = 42.7 bits (99), Expect = 0.034, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 24/179 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + A+ VD Sbjct: 45 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRH-------KIVGIDSREKSQAVYVD 96 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDK 147 PG KK V + ++ R + S LR V L ++D H Q D V L Sbjct: 97 TPGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVVDI-HKWTQNDDLVLEKLKN 148 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V+ K+D L + L + + + N+ E+IP S+++ ++ LR + Sbjct: 149 AEMPVILVINKVDTLEDKKSLLPLIQERTKLMNF----AEIIPVSALRGANLDQLRDTV 203 >gi|159479670|ref|XP_001697913.1| hypothetical protein CHLREDRAFT_120661 [Chlamydomonas reinhardtii] gi|158274011|gb|EDO99796.1| predicted protein [Chlamydomonas reinhardtii] Length = 446 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 27/192 (14%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--- 85 P +A GR NVGKSSL+N + + + + G T +D + K LP Sbjct: 176 PLAVAIVGRPNVGKSSLLNAIAGEER-SIVCDMSGTT--------RDAVDTKVTLPTGKK 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLIDCRHGVKQIDQ 139 + L+D G R + DS G +S +R V L+ID G+ Q D Sbjct: 227 LTLIDTAGI---RKRSRVADSPDG--AEQISVDRAMRAVRRADVAVLVIDAVEGITQQDF 281 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + + + +V+ K D++ P T ++ E + +R+ A V+ TS++ + Sbjct: 282 RLSELFAAEGKAVVVVVNKWDRVDPRLWTVEKMAENVRTQLRH--VAWASVVCTSAIYGR 339 Query: 198 GIEVLRKAILET 209 +E + +A+L+ Sbjct: 340 HVEDVLEAVLDA 351 >gi|134299023|ref|YP_001112519.1| GTP-binding protein EngA [Desulfotomaculum reducens MI-1] gi|172044273|sp|A4J3P1|DER_DESRM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|134051723|gb|ABO49694.1| small GTP-binding protein [Desulfotomaculum reducens MI-1] Length = 439 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%) Query: 29 PPE---IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 PP+ IA GR NVGKSSL+N ++ + + SN PG T+ S+ + N Sbjct: 171 PPDTIRIAVIGRPNVGKSSLVNTILGEERVI-VSNIPGTTRDAI------DSSFEKNGKN 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFS 143 LVD G R K ++ + +VR L R+ RC ++ D G+ + D+ + Sbjct: 224 YVLVDTA--GMRRRKKIDLPTERYSVVRAL--RAVDRCDVALMVFDATEGIAEQDKRIVG 279 Query: 144 FLDKKAVSYQIVLTKID 160 + +K + +++ K D Sbjct: 280 YAHEKGKAIILIINKWD 296 >gi|134277744|ref|ZP_01764459.1| GTP-binding protein EngA [Burkholderia pseudomallei 305] gi|226197301|ref|ZP_03792878.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei Pakistan 9] gi|134251394|gb|EBA51473.1| GTP-binding protein EngA [Burkholderia pseudomallei 305] gi|225930680|gb|EEH26690.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei Pakistan 9] Length = 433 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 169 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKHYTLID 221 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 222 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 279 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 280 ALVVGVNKWDGLDPHVRERT 299 >gi|260893088|ref|YP_003239185.1| ribosome-associated GTPase EngA [Ammonifex degensii KC4] gi|260865229|gb|ACX52335.1| ribosome-associated GTPase EngA [Ammonifex degensii KC4] Length = 447 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 11/137 (8%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P + GR NVGKS+L N LV K +A PG T+ + + ++ Sbjct: 2 GKPVVVIVGRPNVGKSTLFNRLVG-KGVAIVEEEPGVTRD------RLYREVEWCGREFV 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD G +P+ ++ V E + L V ++D + GV DQ + S L + Sbjct: 55 LVDT--GGVVESPESPLEVAIRRQVEQALEEADL--VLFVVDYKTGVTAEDQAIASMLRR 110 Query: 148 KAVSYQIVLTKIDKLSP 164 +V+ K+DK P Sbjct: 111 TGKPTLLVVNKVDKFDP 127 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 23/174 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNN 82 P+A +A GR NVGKSSL+N L+ + + S+ PG T+ FF + + Sbjct: 175 PQAEAIAVAIVGRPNVGKSSLVNALLGEERVI-VSDIPGTTRDAVDTFFTWEGQPYI--- 230 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G K+ + L R R+ L++D GV D+ + Sbjct: 231 -----LIDTAGLRRRSRIKEEAERQSCLRARQALRRA--HVAVLVLDGAEGVTMQDKRIA 283 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQ------ETLEKTKYLIRNYP---TAHPE 187 +++ + I + K D L P++ + E L + Y I P T PE Sbjct: 284 GLIEEAGRAVVIAVNKWD-LVPSSRKDAPRYLEALRRELYFINYAPVVFTVAPE 336 >gi|145641301|ref|ZP_01796881.1| GTPase EngB [Haemophilus influenzae R3021] gi|145274138|gb|EDK14004.1| GTPase EngB [Haemophilus influenzae 22.4-21] Length = 53 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 20/40 (50%), Positives = 26/40 (65%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRK 53 FL P I +P+ EIAF+GRSN GKS+ +N L N+K Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQK 52 >gi|254481405|ref|ZP_05094650.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2148] gi|214038568|gb|EEB79230.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2148] Length = 299 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 36/186 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H + + N + VD Sbjct: 11 VAIVGRPNVGKSTLLNHILGQK-ISITSRKPQTTRHQVLGIKTE------NDSQVIFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERST-----LRCVYLLIDCRHGVKQIDQDVFSFLD 146 PG A N RY++ ++ + + LID R + DQ V + Sbjct: 64 PGLHKAEEKAIN---------RYMNRAASSAIKHVDLILFLID-RTAWTEEDQMVLEQVQ 113 Query: 147 KKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + + +V+ K+D L QE ++ ++ ++P S+++++ +++ Sbjct: 114 RTRIPTLLVVNKVDLLEDKNILLPHLQELADRGEF---------EAIVPVSALRQRNVDM 164 Query: 202 LRKAIL 207 L + IL Sbjct: 165 LEQEIL 170 >gi|221066038|ref|ZP_03542143.1| small GTP-binding protein [Comamonas testosteroni KF-1] gi|220711061|gb|EED66429.1| small GTP-binding protein [Comamonas testosteroni KF-1] Length = 446 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 15/183 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A +GR N GKS+LIN + + L + PG T+ VP + N L Sbjct: 180 PVRLAVAGRPNAGKSTLINTWLGEERLV-AFDMPGTTRD-AITVP-----FERNGQKFEL 232 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L V LLID GV D + ++ + Sbjct: 233 IDTAGLRRKGKVFEAIEKFS--VVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILES 290 Query: 149 AVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S + + K D + Q E +T+ + H S+ KR+G+E L K+I Sbjct: 291 GRSVVLAINKWDAVDDYQRQMLERSIETRLSFLKFAPLH----FISAQKRQGLEPLWKSI 346 Query: 207 LET 209 ++ Sbjct: 347 IQA 349 >gi|325000201|ref|ZP_08121313.1| GTP-binding protein Der [Pseudonocardia sp. P1] Length = 441 Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 16/142 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L+N ++ R+ A + PG T+ + L N L+ Sbjct: 5 PTLAVVGRPNVGKSTLVNRMLGRRE-AVVQDVPGVTRDRVV-----YDGLWNGR-RFKLM 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G+ + + D G + + + T V L++D G DQ L + Sbjct: 58 DTGGW------EPDADGLQGFVAQQAETAMRTADAVLLVVDASVGATATDQAAARVLRRA 111 Query: 149 AVSYQIVLTKI--DKLSPTTAQ 168 V + TK+ D+L+ TA+ Sbjct: 112 KVPVMLAATKVDDDRLTSDTAE 133 >gi|311087969|gb|ADP68048.1| GTP-binding protein EngA [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 441 Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 17/182 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++AF GR NVGKS+LIN ++ + + TSN PG T + + +K N L+D Sbjct: 188 KVAFIGRPNVGKSTLINGILKEERMI-TSNTPGTT------LDSISTPIKYNYENYTLID 240 Query: 91 MPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G A KK ++ + I++ L + L+ID D + F+ Sbjct: 241 TAG---ASKKKKKINDFQRFSIIKTLQTIEKSNVILLIIDASLQTCHQDLSLADFIIHSG 297 Query: 150 VSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K D + ++ E K+K + H S++ +KGI L K+I Sbjct: 298 KGIVVVVNKCDLFNSVELKKIKELIKSKLKFLYFSKIH----FISALYKKGIFQLFKSIK 353 Query: 208 ET 209 E+ Sbjct: 354 ES 355 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I GR+NVGKS+L N+L ++ A +N PG T+ + K SN K + L+ Sbjct: 3 PIIVLIGRTNVGKSTLFNVLTKTRD-ALVANYPGITRDRQYGYCKLQSNKK-----IILI 56 Query: 90 DMPG 93 D G Sbjct: 57 DTAG 60 >gi|302391411|ref|YP_003827231.1| GTP-binding protein Era [Acetohalobium arabaticum DSM 5501] gi|302203488|gb|ADL12166.1| GTP-binding protein Era [Acetohalobium arabaticum DSM 5501] Length = 306 Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust. Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 17/162 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G+ NVGKS+LIN L+ +K T L + +D + L +D Sbjct: 18 VTVIGQPNVGKSTLINHLIGQKIAITTPKKQTTRNKLQCILTRDNAQL-------IFIDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ + +Y ++D + G+ +++ + + L Sbjct: 71 PG---VHRPKDKMGEY--MVDTAYKALKKVELIYFMVDAQKGITDLERKINNQLSGIQTP 125 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 IVL KID +S ++ +E + L + E+IP S+ Sbjct: 126 TIIVLNKIDLVSKAKLKDVIESCRRL-----GDYAELIPVSA 162 >gi|301167244|emb|CBW26826.1| putative GTP-binding protein [Bacteriovorax marinus SJ] Length = 613 Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 81/187 (43%), Gaps = 23/187 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPG--RTQHLNFFVPKDFSNLKNNLPAMALV 89 ++ GR NVGKSSL N L+ +++ A T + PG R +H +D ++ + + LV Sbjct: 8 VSLIGRPNVGKSSLFNRLMQKQHKAITHDQPGVTRDRHYGITTIEDLQDV--DAADIILV 65 Query: 90 DMPGYGYAR-------APKKNVDSWGGLI---VRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 D G+ R + ++N + + ++ R S L V ++D R G D Sbjct: 66 DTGGFYPERIDERGRNSEEENANKFFNIMTDHARMAIGESDL--VLFVVDVREGALPFDN 123 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + ++ + +V K D S A E ++ + E+ TS+ +G+ Sbjct: 124 TIADYIRTTKKPFLVVANKYD--SDKQAGEEID-----FYSLGIDSDELFTTSATHGRGV 176 Query: 200 EVLRKAI 206 LR+ I Sbjct: 177 TFLREKI 183 >gi|119486976|ref|ZP_01620848.1| tRNA modification GTPase [Lyngbya sp. PCC 8106] gi|119455905|gb|EAW37039.1| tRNA modification GTPase [Lyngbya sp. PCC 8106] Length = 469 Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 17/180 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N ++ + A ++ PG T+ + + + +P L D Sbjct: 228 VAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-DT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + V+ G I R + V L ID G + D++++ + + + Sbjct: 281 AGI---RNSEDQVEKIG--IERSQTAAKLADLVLLTIDAEAGWTESDEEIYQQVQHRPLI 335 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++L KID++S A E K + ++ + + T++ +GI L AIL IN Sbjct: 336 --LILNKIDRVS---ANELDAKVEEILAKLNRENLLTVKTAAALNQGITELETAILTAIN 390 >gi|91227851|ref|ZP_01262024.1| GTP-binding protein Era [Vibrio alginolyticus 12G01] gi|269965786|ref|ZP_06179883.1| GTP-binding protein [Vibrio alginolyticus 40B] gi|91188361|gb|EAS74657.1| GTP-binding protein Era [Vibrio alginolyticus 12G01] gi|269829654|gb|EEZ83891.1| GTP-binding protein [Vibrio alginolyticus 40B] Length = 320 Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 28/181 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D + A+ VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD-----GDYQAI-YVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H K D+ V + L K Sbjct: 82 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTKD-DEMVLTKLQKSNF 135 Query: 151 SYQIVLTKIDKLSPTT-----AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D + E +K ++ +V+P S+ + K I+VLRK Sbjct: 136 PVVLCVNKVDNVQDRNDVMLHMAEMSKKMDFV---------DVVPISAKQGKNIDVLRKH 186 Query: 206 I 206 + Sbjct: 187 V 187 >gi|70732274|ref|YP_262030.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf-5] gi|123653208|sp|Q4K6V3|DER_PSEF5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|68346573|gb|AAY94179.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf-5] Length = 490 Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 14/143 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDQPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 DEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSPT 165 F + + I L K D + P+ Sbjct: 300 GFALEAGRALVIALNKWDGMQPS 322 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A + G T+ + + K L+ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRTYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D + G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ + ++ K+D + P A+ P + IP + +GI ++L Sbjct: 106 LRKRNKTSYVIANKVDNIDPDMARAEFA---------PLGMGDAIPIAGAHGRGITQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALSE 161 >gi|268611990|ref|ZP_06145717.1| GTP-binding protein [Ruminococcus flavefaciens FD-1] Length = 297 Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 36/193 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN-NLPAMALVD 90 + +GR+N GKSSL+N +V K +A S+ P T+ + ++N + + D Sbjct: 7 VTIAGRTNAGKSSLLNAIVGEK-IASVSSKPQTTR-------TRITGIRNIDDVQLVFFD 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG K V+ ++ + E S + V ++DC + Q + D+ ++ Sbjct: 59 TPGL------HKPVNKLSEHMLNTVRESVSDIDAVVFVMDCTKKINQQELDLLKSMNSSK 112 Query: 150 VSYQIVLTKI------DKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + +VL KI D+L+P A T +K R VIP S + GI+++ Sbjct: 113 MPVILVLNKIDLLKNKDELAPVIADLT---SKINFR-------AVIPVSVTENSGIDIVI 162 Query: 204 KAIL----ETINY 212 + I+ E+++Y Sbjct: 163 QEIINLSEESVHY 175 >gi|15617192|ref|NP_240405.1| GTP-binding protein EngA [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681942|ref|YP_002468328.1| 50S ribosomal subunit stability factor (YfgK) [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471654|ref|ZP_05635653.1| GTP-binding protein EngA [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11132317|sp|P57662|DER_BUCAI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783141|sp|B8D8G4|DER_BUCA5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|25328230|pir||C85000 hypothetical GTP-binding protein [imported] - Buchnera sp. (strain APS) gi|10039257|dbj|BAB13291.1| hypothetical GTP-binding protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624785|gb|ACL30940.1| 50S ribosomal subunit stability factor (YfgK) [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 453 Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 17/182 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++AF GR NVGKS+LIN ++ + + TSN PG T + + +K N L+D Sbjct: 188 KVAFIGRPNVGKSTLINGILKEERMI-TSNTPGTT------LDSISTPIKYNYENYTLID 240 Query: 91 MPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G A KK ++ + I++ L + L+ID D + F+ Sbjct: 241 TAG---ASKKKKKINDFQRFSIIKTLQTIEKSNVILLIIDASLQTCHQDLSLADFIIHSG 297 Query: 150 VSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K D + ++ E K+K + H S++ +KGI L K+I Sbjct: 298 KGIVVVVNKCDLFNSVELKKIKELIKSKLKFLYFSKIH----FISALYKKGIFQLFKSIK 353 Query: 208 ET 209 E+ Sbjct: 354 ES 355 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I GR+NVGKS+L N+L ++ A +N PG T+ + K SN K + L+ Sbjct: 3 PIIVLIGRTNVGKSTLFNVLTKTRD-ALVANYPGITRDRQYGYCKLQSNKK-----IILI 56 Query: 90 DMPG 93 D G Sbjct: 57 DTAG 60 >gi|228470615|ref|ZP_04055472.1| ribosome-associated GTPase EngA [Porphyromonas uenonis 60-3] gi|228307742|gb|EEK16718.1| ribosome-associated GTPase EngA [Porphyromonas uenonis 60-3] Length = 436 Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 18/162 (11%) Query: 21 IGLLPKAGP-------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +GLLPK G P A GR N GKSSL+N L+ + T + G T+ + F Sbjct: 160 LGLLPKEGNHEPLLELPRFAIVGRPNAGKSSLLNALIGEERNIVTDRS-GTTRD-SIFAE 217 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D N LVD G + K N D ++R + +LID G Sbjct: 218 YDKYN-----QHFYLVDTA--GIRKKGKVNEDLEYYSVIRAIRAIENADVCIMLIDATRG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEK 173 ++ D ++F + + + + + K D + + Q T+E+ Sbjct: 271 IEAQDANIFRVIQRNSKGLVVCVNKWDLVEDKSLPVQRTMEE 312 >gi|146296747|ref|YP_001180518.1| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410323|gb|ABP67327.1| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 609 Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 37/180 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G NVGKS + + L + SN PG T +N+ K++ ++D Sbjct: 20 IALVGNPNVGKSVVFSKLTGKY--VEVSNFPGTTVDINYGFYKNY----------VVIDT 67 Query: 92 PG-YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG YG + + + + + LS + V D H +D+D+F L ++ + Sbjct: 68 PGVYGISSFNDEEIVTRDIV----LSVDKVINVV----DALH----LDRDLF--LTQQLI 113 Query: 151 SYQ----IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 YQ +VL D++ + ++ K T EVI TS+ K +GIE L++AI Sbjct: 114 DYQKDIIVVLNMFDEVKKNDMKIDIDALK------KTLGVEVIVTSATKAEGIEKLQEAI 167 >gi|11498924|ref|NP_070155.1| GTP-binding protein [Archaeoglobus fulgidus DSM 4304] gi|13124170|sp|O28943|ENGB_ARCFU RecName: Full=Probable GTP-binding protein EngB gi|2649250|gb|AAB89919.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 197 Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 27/150 (18%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ F+GRSNVGKS+L + L K R PG T N F + ++ D Sbjct: 5 EVIFAGRSNVGKSTLFSALF--KFEVRKGKKPGTTIRPNSF----------QVGSVIFTD 52 Query: 91 MPGYGYARAPKKNV-DSWGGLIVRYLSERSTLRCV----------YLLIDCR---HGVKQ 136 +PG+GY +N + +V Y+ E + R V +L I R G Sbjct: 53 LPGFGYVSGYSRNFSERVKDFVVEYI-ETNARRIVASVEVIDASSFLEIAERWEKRGYIP 111 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 ++ ++F FL+ + K+DK+ T Sbjct: 112 VEIEMFEFLNDVTPRVFLAANKMDKVDDIT 141 >gi|114319757|ref|YP_741440.1| GTP-binding protein EngA [Alkalilimnicola ehrlichii MLHE-1] gi|122312352|sp|Q0AB37|DER_ALHEH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|114226151|gb|ABI55950.1| small GTP-binding protein [Alkalilimnicola ehrlichii MLHE-1] Length = 467 Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 9/136 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G IA GR NVGKS+L+N L+ + + + PG T+ + F+P L+ + Sbjct: 180 GATRIAIVGRPNVGKSTLVNRLLGEERVL-VYDMPGTTRD-SVFIP-----LERDGRPYT 232 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G + V+ + +++ L V L+ID R GV D + + + Sbjct: 233 LIDTAGMRRRARVHETVEKFS--VIQTLKAMEAAHVVILVIDAREGVTDQDTHLIGHVLE 290 Query: 148 KAVSYQIVLTKIDKLS 163 + + + K D L+ Sbjct: 291 SGRALVLAINKWDGLT 306 >gi|290475995|ref|YP_003468891.1| GTP-binding protein, essential for cell growth [Xenorhabdus bovienii SS-2004] gi|289175324|emb|CBJ82127.1| GTP-binding protein, essential for cell growth [Xenorhabdus bovienii SS-2004] Length = 496 Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 13/154 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 205 PTTLPLKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGR 257 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L++D R GV D + F Sbjct: 258 EYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLIVDAREGVSDQDLSLLGF 315 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + S I + K D +S QE + K ++ Sbjct: 316 ILNSGRSLVIAVNKWDGMS----QEDRDHVKDML 345 >gi|255505458|ref|ZP_05346246.3| GTP-binding protein [Bryantella formatexigens DSM 14469] gi|255267758|gb|EET60963.1| GTP-binding protein [Bryantella formatexigens DSM 14469] Length = 406 Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 14/140 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I F GR N GKSS++N + N++ +A S G T V K L P Sbjct: 14 PAANRVHIGFFGRRNAGKSSVVNAVTNQE-IAVVSEVRGTTTDP---VYKTMELLPVG-P 68 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFS 143 M ++D PGY + S G L VR + + L++D G+ ++++++ Sbjct: 69 VM-IIDTPGY-------DDEGSLGELRVRRTKQVLNKTDVAVLVVDATAGMTEVERELTG 120 Query: 144 FLDKKAVSYQIVLTKIDKLS 163 KK + Y I K D L Sbjct: 121 IFAKKEIPYIIAYNKADLLE 140 >gi|56963446|ref|YP_175177.1| Era, Era/TrmE family GTP-binding protein [Bacillus clausii KSM-K16] gi|81822138|sp|Q5WHD9|ERA_BACSK RecName: Full=GTPase Era gi|56909689|dbj|BAD64216.1| Era/TrmE family GTP-binding protein Era [Bacillus clausii KSM-K16] Length = 303 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 27/182 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ +K +A S+ P T++ K L + + +D Sbjct: 13 VSIIGRPNVGKSTLLNRVIGQK-IAIMSDKPQTTRN------KVQGVLTRDDAQLVFMDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI-----DCRHGVKQIDQDVFSFLD 146 PG PK + G +++ ++TLR V L++ D + G + Q + L Sbjct: 66 PG---IHKPKHRL---GDFMMKVA--KNTLREVDLILYVVEADAKFGPGE--QYIIERLQ 115 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +++ KIDK+SP +E L+ YP A E+IP S+++ + L + I Sbjct: 116 ETKTPVFLLINKIDKVSP---EELLKVIDLYKDRYPFA--EIIPISALEGNNVPTLVEQI 170 Query: 207 LE 208 +E Sbjct: 171 VE 172 >gi|114565878|ref|YP_753032.1| small GTP-binding protein domain-containing protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336813|gb|ABI67661.1| small GTP-binding protein domain [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 402 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 31/188 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PKA IA GR N GKSSLIN L R+ +A S PG T F K L P Sbjct: 5 PKANRLHIAIFGRRNAGKSSLINAL-TRQEIALVSEVPGTTTDPVF---KAMEILPIG-P 59 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLR---CVYLLIDCRHGVKQIDQD 140 M ++D G +D G L +R R L L+ID G+ + +++ Sbjct: 60 CM-IIDTAG----------IDDEGQLGELRIKKTREVLNQTDLALLVIDPALGISEFEKE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + + ++ VL K D+ +++LEK L ++ SS +GIE Sbjct: 109 LKQAIRSRKIALIGVLNKTDQ--GQVDKKSLEKQLGL---------SLVAVSSRSGEGIE 157 Query: 201 VLRKAILE 208 L++ I+E Sbjct: 158 FLKERIIE 165 >gi|301164626|emb|CBW24185.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 391 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 24/184 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ IA G+ N GKSSLIN L N +N A S+ G T + P + + + Sbjct: 5 PRSNRLHIALFGKRNSGKSSLINALTN-QNAALVSDIAGTTTD-PVYQPMEI----HGIG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D G+ + G L + + + + L++ C + + +Q Sbjct: 59 PCVFIDTAGF-------DDEGELGSLRIERTLQAADKADIALMVCCDTELSE-EQRWIEL 110 Query: 145 LDKKAVSYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L ++ + Y +VL K D L P + LE+ HP ++ S+ ++ GI+ +R Sbjct: 111 LKERNIPYLLVLNKADLLEKPDEVADKLEQQT-------GQHPLIV--SAKEKTGIDSIR 161 Query: 204 KAIL 207 ++IL Sbjct: 162 QSIL 165 >gi|219682497|ref|YP_002468881.1| 50S ribosomal subunit stability factor (YfgK) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254783142|sp|B8D8C1|DER_BUCAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219622230|gb|ACL30386.1| 50S ribosomal subunit stability factor (YfgK) [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311086326|gb|ADP66408.1| GTP-binding protein EngA [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086900|gb|ADP66981.1| GTP-binding protein EngA [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 453 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 17/182 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++AF GR NVGKS+LIN ++ + + TSN PG T + + +K N L+D Sbjct: 188 KVAFIGRPNVGKSTLINGILKEERMI-TSNTPGTT------LDSISTPIKYNYENYTLID 240 Query: 91 MPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G A KK ++ + I++ L + L+ID D + F+ Sbjct: 241 TAG---ASKKKKKINDFQRFSIIKTLQTIEKSNVILLIIDASLQTCHQDLSLADFIIHSG 297 Query: 150 VSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K D + ++ E K+K + H S++ +KGI L K+I Sbjct: 298 KGIVVVVNKCDLFNSVELKKIKELIKSKLKFLYFSKIH----FISALYKKGIFQLFKSIK 353 Query: 208 ET 209 E+ Sbjct: 354 ES 355 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I GR+NVGKS+L N+L ++ A +N PG T+ + K SN K + L+ Sbjct: 3 PIIVLIGRTNVGKSTLFNVLTKTRD-ALVANYPGITRDRQYGYCKLQSNKK-----IILI 56 Query: 90 DMPG 93 D G Sbjct: 57 DTAG 60 >gi|319787579|ref|YP_004147054.1| GTP-binding protein Era [Pseudoxanthomonas suwonensis 11-1] gi|317466091|gb|ADV27823.1| GTP-binding protein Era [Pseudoxanthomonas suwonensis 11-1] Length = 307 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 22/181 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 +A GR NVGKS+L+N LV K ++ SN P T+H + +P M LV Sbjct: 15 VAVVGRPNVGKSTLVNALVGAK-VSIVSNRPQTTRHRLLGIA--------TVPGGQMLLV 65 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV---YLLIDCRHGVKQIDQDVFSFLD 146 D PG + + + + ++ R + R + V L+++ ++ D F L Sbjct: 66 DTPGL-HRQEGRFKASAMSRVMNR--TARGAVEDVDAAVLVVEAGRWDEE-DSHAFKVLS 121 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V+ K+D+L + R + H P S++KRKG+E L + Sbjct: 122 DAGIPVVLVVNKVDRLKDKSTLLPFLAEVSKDRQFAAVH----PVSALKRKGLEALVADV 177 Query: 207 L 207 L Sbjct: 178 L 178 >gi|317490873|ref|ZP_07949309.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920420|gb|EFV41743.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium 9_2_54FAA] Length = 495 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 12/151 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P +IA GR NVGKS+L N ++ + + PG T+ + ++P + + Sbjct: 203 PQDLPIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MVRDER 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L L+ID R G+ D + F Sbjct: 256 EYVLIDTAGVRKRGKVTDTVEKFS--VIKTLQAIEDSNVALLVIDAREGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSP---TTAQETLE 172 + S IV+ K D LS T +E L+ Sbjct: 314 ILNSGRSLVIVVNKWDGLSEDVKTQVKEMLD 344 >gi|150021239|ref|YP_001306593.1| small GTP-binding protein [Thermosipho melanesiensis BI429] gi|149793760|gb|ABR31208.1| small GTP-binding protein [Thermosipho melanesiensis BI429] Length = 396 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 32/179 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA +GR NVGKSS +N L+ ++ ++ SN G T P S + + + L+D Sbjct: 11 IAITGRRNVGKSSFMNALIGQE-VSIVSNVAGTTTD-----PVFKSMELSPVGPITLIDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL--SERSTLR--CVYLLIDCRHGVKQIDQDVFSFLDK 147 PG +D G L ++ + +++S R C L++D G ++ + + Sbjct: 65 PG----------LDDVGELGIKRIKKAKKSLYRADCGILIVDDIPG--NFEEQIIKLFKE 112 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + Y I + KID T E +EK +Y N P ++ S++K+ G E + K I Sbjct: 113 LEIPYFIAINKID----TIDHENIEK-EYKKYNVP-----ILKVSALKKIGFEKIGKTI 161 >gi|126657505|ref|ZP_01728661.1| tRNA modification GTPase [Cyanothece sp. CCY0110] gi|126621209|gb|EAZ91922.1| tRNA modification GTPase [Cyanothece sp. CCY0110] Length = 460 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 228 VAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLVVGGIP-IQVLDT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G R + ++ L V L ID G D +++ + + + Sbjct: 281 AGI---RQTTDQVEKIGVERSRLAASQADL--VLLTIDATVGWTVEDSEIYQPI--RHLP 333 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID +P +Q +P ++ TS+ +GIE L IL+ IN Sbjct: 334 TILVINKIDLATPDLSQ------------FPPEIKGIVKTSAANHQGIEALESTILQGIN 381 >gi|209524294|ref|ZP_03272844.1| tRNA modification GTPase TrmE [Arthrospira maxima CS-328] gi|209495385|gb|EDZ95690.1| tRNA modification GTPase TrmE [Arthrospira maxima CS-328] Length = 469 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 19/181 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 228 VAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLVVGGIP-IQVLDT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G + R + V +DC +G + + +++ + + + Sbjct: 281 AGI---RKSDDKVEQIG--VERSQIAAQSADLVLFTLDCENGWTEAENEIYQQVKNRPII 335 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVKRKGIEVLRKAILETI 210 IV+ K D+LS +AQ LE + I N P +I T++ +GI L ++IL + Sbjct: 336 --IVMNKSDRLS--SAQ--LENLRQSIINQLDIKPSLIIATAATLNQGITDLEESILNAV 389 Query: 211 N 211 + Sbjct: 390 H 390 >gi|192362315|ref|YP_001981972.1| GTP-binding protein EngA [Cellvibrio japonicus Ueda107] gi|238692428|sp|B3PDM5|DER_CELJU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|190688480|gb|ACE86158.1| GTP-binding protein EngA [Cellvibrio japonicus Ueda107] Length = 466 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 23/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L N ++ A ++ PG T+ + + L+N ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTNSRD-ALVADYPGLTRDRKYGEAR----LENR--RFIVI 55 Query: 90 DMPGYGYARAPKKNVDS-WGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G ++ +DS G + + E V ++D R G+ D+ + L Sbjct: 56 DTGGIS---GEEEGIDSAMAGQSLLAIQEAD---IVLFIVDSRVGLNPADELIARHLRVH 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V KID + P A L Y EV PT++ +G+ L + +L Sbjct: 110 NKKTYVVANKIDGMDPDIA---------LAPFYELGMGEVHPTTATHGRGVRSLMEDVL 159 >gi|297588412|ref|ZP_06947055.1| GTP-binding protein Era [Finegoldia magna ATCC 53516] gi|297573785|gb|EFH92506.1| GTP-binding protein Era [Finegoldia magna ATCC 53516] Length = 294 Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 21/171 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ GRSNVGKS+L+N ++ K L S+ P T++ + D N+ A+ L D Sbjct: 7 ISVIGRSNVGKSTLLNRVLGEK-LTIISDKPQTTRNKIQLIYTD-----ENMQAIFL-DT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + PK + + ++ +S + + + ++D + ++D ++ L K V Sbjct: 60 PG---IQTPKNKLGDY--MLKVSMSTLNEVDVITYIVDTTEEIGKLDTEIIEKL--KLVD 112 Query: 152 YQIVL--TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 +I+L KIDK S E +E + + E+IP S++ +E Sbjct: 113 TKIILLINKIDKTSSDKVNELVE-----MYSKVGIFEEIIPISALNGDNVE 158 >gi|20809125|ref|NP_624296.1| tRNA modification GTPase TrmE [Thermoanaerobacter tengcongensis MB4] gi|25009498|sp|Q8R6K8|MNME_THETN RecName: Full=tRNA modification GTPase mnmE gi|20517805|gb|AAM25900.1| predicted GTPase [Thermoanaerobacter tengcongensis MB4] Length = 460 Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ V +++ N+K +P + L+D Sbjct: 226 AIIGKPNVGKSSLLNALL-KQNRAIVTDIPGTTRD----VIEEYMNIK-GIP-IKLIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + L + ++D + + D ++F L K + + Sbjct: 279 GI---RHTDELVEKIGVEKSKEVLAEADL--ILFVLDASRDLTKEDYEIFDILSGKNIIF 333 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL K+D P E E+ K L+ N ++ S+V+R G++ L I Sbjct: 334 --VLNKVD--LPKKIDE--EELKKLVGNGI-----IVEVSTVERTGLDKLESEI 376 >gi|237840663|ref|XP_002369629.1| hypothetical protein TGME49_008490 [Toxoplasma gondii ME49] gi|211967293|gb|EEB02489.1| hypothetical protein TGME49_008490 [Toxoplasma gondii ME49] gi|221503365|gb|EEE29063.1| mmr1/hsr1 GTP binding protein, putative [Toxoplasma gondii VEG] Length = 1064 Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 10/84 (11%) Query: 16 RGVPEIGLLPKAGPPEI-AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +G E L + PP I G NVGKSS+IN L+ K ++ S PG+T+HL V Sbjct: 652 KGSAEDSALLASPPPFIVGLVGFPNVGKSSVINALLGSKKVS-VSRTPGKTRHLQTLVVG 710 Query: 75 DFSNLKNNLPAMALVDMPGYGYAR 98 D + L D PG + R Sbjct: 711 D--------TGLTLCDCPGLVFPR 726 >gi|332527857|ref|ZP_08403894.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2] gi|332112434|gb|EGJ12227.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2] Length = 447 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 18/192 (9%) Query: 20 EIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 E G P A P +A +GR NVGKS+LIN + + L + PG T+ + Sbjct: 170 EEGAEPDADAPIRLAVAGRPNVGKSTLINAWLGEERLV-AFDQPGTTRDAIKV------S 222 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 L+ L+D G + ++ + +V+ L + V L++D GV + D Sbjct: 223 LEREGRRFELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIADANVVVLMVDATVGVSEQD 280 Query: 139 QDVFSFLDKKAVSYQIVLTK---IDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + ++ + + + L K D+ Q ++E ++ P ++ S+ K Sbjct: 281 AHIAGYVLESGRAVVLALNKWDATDEYQRQQLQRSIESRLAFLKFAP-----LLQISAKK 335 Query: 196 RKGIEVLRKAIL 207 R G+ L KAIL Sbjct: 336 RTGLTALWKAIL 347 >gi|284040067|ref|YP_003389997.1| ribosome-associated GTPase EngA [Spirosoma linguale DSM 74] gi|283819360|gb|ADB41198.1| ribosome-associated GTPase EngA [Spirosoma linguale DSM 74] Length = 435 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 20/188 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNL 79 P AG P IA GR NVGKSS +N+L ++ N+A T+ T++ + KDF Sbjct: 171 PDAGIPRIAILGRPNVGKSSFLNVLTGQERSIVTNIAGTTRDAINTRYKAY--GKDF--- 225 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 L D G N++ + ++R + +L+D G++ D Sbjct: 226 -------ILTDTAGIRRKARVDSNIEFYS--VLRSIKAMEDSDVCIILLDATRGLEAQDL 276 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH-PEVIPTSSVKRKG 198 ++ K I++ K D + + + + + R P + P + + K++ Sbjct: 277 NIIGQAIKAKKGVVIMVNKWDAIEKDHRTADVMRKEMIQRMMPIDYVPIIFASVHEKQRI 336 Query: 199 IEVLRKAI 206 +V+ KA+ Sbjct: 337 FQVMEKAM 344 >gi|229176160|ref|ZP_04303652.1| tRNA modification GTPase mnmE [Bacillus cereus MM3] gi|228607319|gb|EEK64649.1| tRNA modification GTPase mnmE [Bacillus cereus MM3] Length = 458 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTHEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D LS +E+ L A +I TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTD-LSQVI---DMERVTEL-----AAGNRIITTSLIEEQGIDELEKAI 374 >gi|60683114|ref|YP_213258.1| hypothetical protein BF3665 [Bacteroides fragilis NCTC 9343] gi|60494548|emb|CAH09347.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] Length = 391 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 24/184 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ IA G+ N GKSSLIN L N +N A S+ G T + P + + + Sbjct: 5 PRSNRLHIALFGKRNSGKSSLINALTN-QNAALVSDIAGTTTD-PVYQPMEI----HGIG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D G+ + G L + + + + L++ C + + +Q Sbjct: 59 PCVFIDTAGF-------DDEGELGSLRIERTLQAADKADIALMVCCDTELSE-EQRWIEL 110 Query: 145 LDKKAVSYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L ++ + Y +VL K D L P + LE+ HP ++ S+ ++ GI+ +R Sbjct: 111 LKERNIPYLLVLNKADLLEKPDEVADKLEQQT-------GQHPLIV--SAKEKTGIDSIR 161 Query: 204 KAIL 207 ++IL Sbjct: 162 QSIL 165 >gi|53715179|ref|YP_101171.1| putative GTPase [Bacteroides fragilis YCH46] gi|253566314|ref|ZP_04843768.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|52218044|dbj|BAD50637.1| putative GTPase [Bacteroides fragilis YCH46] gi|251945418|gb|EES85856.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 391 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 24/184 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ IA G+ N GKSSLIN L N +N A S+ G T + P + + + Sbjct: 5 PRSNRLHIALFGKRNSGKSSLINALTN-QNAALVSDIAGTTTD-PVYQPMEI----HGIG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D G+ + G L + + + + L++ C + + +Q Sbjct: 59 PCVFIDTAGF-------DDEGELGSLRIERTLQAADKADIALMVCCDTELSE-EQRWIEL 110 Query: 145 LDKKAVSYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L ++ + Y +VL K D L P + LE+ HP ++ S+ ++ GI+ +R Sbjct: 111 LKERNIPYLLVLNKADLLEKPDEVADKLEQQT-------GQHPLIV--SAKEKTGIDSIR 161 Query: 204 KAIL 207 ++IL Sbjct: 162 QSIL 165 >gi|118602618|ref|YP_903833.1| GTP-binding protein Era [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567557|gb|ABL02362.1| GTP-binding protein Era [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 308 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP--KDFSNLKNNLPAMALV 89 IA GR NVGKS+L+N L+ +K L+ TS+ P T+H + D+ M V Sbjct: 22 IAVVGRPNVGKSTLVNELIGQK-LSITSHRPQTTRHRIHVIDTTDDYQ--------MVFV 72 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG K ++S+ S + + + L + K+ D V + + Sbjct: 73 DTPGIHMGNC--KAINSYMNKAAS--STIANVDVILWLTEVGKWTKE-DSRVLEHITRIK 127 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + KIDKL A+E L + + Y PT ++ P S+ K+ I LRK +L Sbjct: 128 TPVILCINKIDKLK--YAKEVLPFLDKVSQKYQPT---DLFPLSAFKKNDIHALRKLVLH 182 >gi|291541888|emb|CBL14998.1| iron-only hydrogenase maturation protein HydF [Ruminococcus bromii L2-63] Length = 391 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 20/146 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + I F GR N GKSS++N + N +N++ S+ G T V K L L Sbjct: 7 PSSERLHIGFFGRRNAGKSSVVNAVTN-QNMSLVSDKKGTTTDP---VEKTMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCV---YLLIDCRHGVKQIDQD 140 + ++D G+ D G L +R ++ L V L++D G+ ++ + Sbjct: 61 PVVIIDTAGF----------DDGGTLGTMRVERTKAVLNRVDIAVLVVDGTIGMTSVENE 110 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTT 166 + S ++K + Y IV K D L TT Sbjct: 111 LVSLFEEKKIPYLIVFNKCDLLDNTT 136 >gi|119474740|ref|ZP_01615093.1| predicted GTPase [marine gamma proteobacterium HTCC2143] gi|119450943|gb|EAW32176.1| predicted GTPase [marine gamma proteobacterium HTCC2143] Length = 473 Score = 42.4 bits (98), Expect = 0.043, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%) Query: 25 PKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 PKA P IA G +NVGK+SLI L R + S++PG T+H+ V + Sbjct: 3 PKANLPLNIAVVGHTNVGKTSLIRTLTRRNSFGDVSSSPGTTRHVESQVL-----MVTGQ 57 Query: 84 PAMALVDMPGY 94 + L+D PG+ Sbjct: 58 KIVRLLDTPGF 68 >gi|265767007|ref|ZP_06094836.1| GTP-binding protein Era [Bacteroides sp. 2_1_16] gi|263253384|gb|EEZ24860.1| GTP-binding protein Era [Bacteroides sp. 2_1_16] Length = 391 Score = 42.4 bits (98), Expect = 0.043, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 24/184 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ IA G+ N GKSSLIN L N +N A S+ G T + P + + + Sbjct: 5 PRSNRLHIALFGKRNSGKSSLINALTN-QNAALVSDIAGTTTD-PVYQPMEI----HGIG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D G+ + G L + + + + L++ C + + +Q Sbjct: 59 PCVFIDTAGF-------DDEGELGSLRIERTLQAADKADIALMVCCDTELSE-EQRWIEL 110 Query: 145 LDKKAVSYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L ++ + Y +VL K D L P + LE+ HP ++ S+ ++ GI+ +R Sbjct: 111 LKERNIPYLLVLNKADLLEKPDEVADKLEQQT-------GQHPLIV--SAKEKTGIDSIR 161 Query: 204 KAIL 207 ++IL Sbjct: 162 QSIL 165 >gi|189425186|ref|YP_001952363.1| GTP-binding protein Era [Geobacter lovleyi SZ] gi|259645944|sp|B3E422|ERA_GEOLS RecName: Full=GTPase Era gi|189421445|gb|ACD95843.1| GTP-binding protein Era [Geobacter lovleyi SZ] Length = 296 Score = 42.4 bits (98), Expect = 0.043, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 28/182 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ K +A S+ P T+++ + L + + VD Sbjct: 11 VSIIGRPNVGKSTLLNRILGEKIVA-VSDKPQTTRNVIRGI------LSDETSQIVFVDT 63 Query: 92 PGYGYARAP--KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ-IDQDVFSFLDKK 148 PG AR + VD+ ++ + + + L++D +++ +D+ S K Sbjct: 64 PGIHTARTRINRAMVDAAMTVV-------TGIDLMLLVVDATQKIEETFIKDICS---KA 113 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVLRKAI 206 +VL KID+++P EK +I Y + PE+IP S+ IE L + Sbjct: 114 GAPIYLVLNKIDQVTPK------EKLFTVIEGYTRLYDFPEIIPISAQSGSNIERLVDLV 167 Query: 207 LE 208 E Sbjct: 168 RE 169 >gi|154249358|ref|YP_001410183.1| GTP-binding protein Era [Fervidobacterium nodosum Rt17-B1] gi|154153294|gb|ABS60526.1| GTP-binding protein Era [Fervidobacterium nodosum Rt17-B1] Length = 301 Score = 42.4 bits (98), Expect = 0.043, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 26/183 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LN-FFVPKDFSNLKNNLPAMALVD 90 +F G+ NVGKSS+IN ++ +K + S P T++ +N + DF + VD Sbjct: 10 SFVGKPNVGKSSIINAIM-KKKVVIVSEKPQTTRNRINVIYTTDDFQ--------IVFVD 60 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL---IDCRHGVKQIDQDVFSFLDK 147 PG K + G +V+ + L+ V LL +D + G + ++ + ++++ Sbjct: 61 TPGI------HKPLHRLGEYMVK--AAVQALKNVDLLLFTVDAKEGFETPEEYIIEYVNQ 112 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V+ KID + +E ++ + ++R EV+ TS+V +G++ L + I+ Sbjct: 113 SKTPVIGVINKIDLVD----RERIDSIEEIMRKKVENLKEVVKTSAVTGEGLDKLLEVIV 168 Query: 208 ETI 210 E + Sbjct: 169 ENL 171 >gi|323703070|ref|ZP_08114725.1| ribosome-associated GTPase EngA [Desulfotomaculum nigrificans DSM 574] gi|323531964|gb|EGB21848.1| ribosome-associated GTPase EngA [Desulfotomaculum nigrificans DSM 574] Length = 442 Score = 42.4 bits (98), Expect = 0.043, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 20/149 (13%) Query: 21 IGLLPKAG----PPE---IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LLP+ PP+ IA GR NVGKSSL+N ++ + + SN PG T+ Sbjct: 161 VKLLPEQEEDPYPPDTIRIAVIGRPNVGKSSLVNAILGEERVI-VSNIPGTTRDAI---- 215 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCR 131 S + N + +VD G R + ++ + +VR L R+ RC +L+D Sbjct: 216 --DSPFERNGKSYVIVDTA--GMRRRNRIDLPAERYSVVRAL--RAIDRCDVALMLLDAT 269 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 GV + D+ + + +K + +V+ K D Sbjct: 270 EGVTEQDKRIVGYAHEKGKAIILVVNKWD 298 >gi|256823051|ref|YP_003147014.1| small GTP-binding protein [Kangiella koreensis DSM 16069] gi|256796590|gb|ACV27246.1| small GTP-binding protein [Kangiella koreensis DSM 16069] Length = 467 Score = 42.4 bits (98), Expect = 0.044, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 21/182 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A +N PG T+ + + LK +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKSRD-ALVANLPGLTRDRQY----GQATLKGQ--KFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ +D G + + L + V L+D R G+ D+ V L ++ Sbjct: 56 DTGGIA---GDEEGID--GLMAGQSLLAITEANIVLFLVDARTGMTAADEFVADHLRRQN 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +++ K+D + A L Y + V+P ++ +G+ L I + Sbjct: 111 KPIIVLVNKVDGIHADAA---------LSDYYSLGYQTVLPLAAAHGRGVNTLVDTIFDE 161 Query: 210 IN 211 ++ Sbjct: 162 LH 163 >gi|217076882|ref|YP_002334598.1| GTP-binding protein [Thermosipho africanus TCF52B] gi|217036735|gb|ACJ75257.1| GTP-binding protein [Thermosipho africanus TCF52B] Length = 258 Score = 42.4 bits (98), Expect = 0.044, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 11/73 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I +G NVGKSS+IN + RK LA+T APG T+ L + NL + L+D Sbjct: 106 ILIAGVPNVGKSSIINKVSGRK-LAKTGMAPGITRGLQWI----------NLGKVKLLDT 154 Query: 92 PGYGYARAPKKNV 104 PG Y++ K+V Sbjct: 155 PGILYSKLFNKDV 167 >gi|110802047|ref|YP_699296.1| GTP-binding protein Era [Clostridium perfringens SM101] gi|168204746|ref|ZP_02630751.1| GTP-binding protein Era [Clostridium perfringens E str. JGS1987] gi|168208717|ref|ZP_02634342.1| GTP-binding protein Era [Clostridium perfringens B str. ATCC 3626] gi|168212948|ref|ZP_02638573.1| GTP-binding protein Era [Clostridium perfringens CPE str. F4969] gi|168215642|ref|ZP_02641267.1| GTP-binding protein Era [Clostridium perfringens NCTC 8239] gi|169343587|ref|ZP_02864586.1| GTP-binding protein Era [Clostridium perfringens C str. JGS1495] gi|182624448|ref|ZP_02952232.1| GTP-binding protein Era [Clostridium perfringens D str. JGS1721] gi|122956577|sp|Q0SRG1|ERA_CLOPS RecName: Full=GTPase Era gi|110682548|gb|ABG85918.1| GTP-binding protein Era [Clostridium perfringens SM101] gi|169298147|gb|EDS80237.1| GTP-binding protein Era [Clostridium perfringens C str. JGS1495] gi|170663559|gb|EDT16242.1| GTP-binding protein Era [Clostridium perfringens E str. JGS1987] gi|170713142|gb|EDT25324.1| GTP-binding protein Era [Clostridium perfringens B str. ATCC 3626] gi|170715652|gb|EDT27834.1| GTP-binding protein Era [Clostridium perfringens CPE str. F4969] gi|177910451|gb|EDT72828.1| GTP-binding protein Era [Clostridium perfringens D str. JGS1721] gi|182382082|gb|EDT79561.1| GTP-binding protein Era [Clostridium perfringens NCTC 8239] Length = 296 Score = 42.4 bits (98), Expect = 0.044, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 I GR NVGKS+L N+L+ K L+ SN P T++ D+ M V Sbjct: 7 ITIVGRPNVGKSTLTNLLMGEK-LSIVSNKPQTTRNNIQTILTGDDYQ--------MIFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG PK + + ++ + V L + V + D+ + L + Sbjct: 58 DTPG---IHKPKHKLGEY--MVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIIEQLKNQK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 VL K+D+ SP +TLE + Y A E+IP S++K K + L Sbjct: 113 APVIFVLNKVDESSPEKVAKTLE---LFSKEYDFA--EMIPISAMKAKNTDKL 160 >gi|269960404|ref|ZP_06174777.1| GTP-binding protein [Vibrio harveyi 1DA3] gi|269834831|gb|EEZ88917.1| GTP-binding protein [Vibrio harveyi 1DA3] Length = 320 Score = 42.4 bits (98), Expect = 0.044, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 18/176 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D + A+ VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD-----GDYQAI-YVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H K D+ V + L K Sbjct: 82 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTKD-DEMVLTKLQKSNF 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D + E + + + +V+P S+ + K I+VLRK + Sbjct: 136 PVVLCVNKVDNVQDRN--EVMMHMADMSKKMDFV--DVVPISAKQGKNIDVLRKHV 187 >gi|229592437|ref|YP_002874556.1| GTP-binding protein EngA [Pseudomonas fluorescens SBW25] gi|229364303|emb|CAY52040.1| GTP-binding protein [Pseudomonas fluorescens SBW25] Length = 493 Score = 42.4 bits (98), Expect = 0.044, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 192 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDEPGTTRD-SIYIP-----FERN 244 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 245 DEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 302 Query: 143 SFLDKKAVSYQIVLTKIDKLSPT 165 F + + I + K D ++P+ Sbjct: 303 GFALEAGRALVIAINKWDGMTPS 325 Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 75/194 (38%), Gaps = 49/194 (25%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L RT +A + D S L + Sbjct: 7 PVIALVGRPNVGKSTLFN------RLTRTRDA----------IVGDLSGLTRDRQ----- 45 Query: 90 DMPGYGYARAPKKN---VDSWGGL------IVRYLSERSTL-----RCVYLLIDCRHGVK 135 YG A+ ++ VD+ GG+ + ++E+S L V L+D R G Sbjct: 46 ----YGEAKWQGRSYIIVDT-GGISGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYT 100 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 DQ + L K+ +V KID + P A+ P + IP + Sbjct: 101 AADQMIGEHLRKRNKRSYLVANKIDNIDPEQARAEFS---------PMGLGDAIPVAGAH 151 Query: 196 RKGIEVLRKAILET 209 +GI + + L T Sbjct: 152 GRGITQMLEIALST 165 >gi|167587055|ref|ZP_02379443.1| GTP-binding protein EngA [Burkholderia ubonensis Bu] Length = 445 Score = 42.4 bits (98), Expect = 0.044, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V DF +N P L+D Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV--DFE--RNGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L + V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSIADANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 292 ALVVGVNKWDGLDPHVRERT 311 >gi|222151466|ref|YP_002560622.1| hypothetical protein MCCL_1219 [Macrococcus caseolyticus JCSC5402] gi|222120591|dbj|BAH17926.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 300 Score = 42.4 bits (98), Expect = 0.046, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 23/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ +N ++ +K +A S+ T++ K L + +D Sbjct: 10 VAIIGRPNVGKSTFMNKVLGQK-VAIMSDKAQTTRN------KVQGVLTTEQSQIIFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG PK + + + + +TLR + +++ + + D+ + L Sbjct: 63 PG---IHKPKHMLGDYMMKVAK-----NTLREVDAILFMVNVEESIGRGDEFIIELLKNN 114 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +VL KIDK+ P + +EK K L+ P A E++P S+++ ++ L K I Sbjct: 115 RTPIFLVLNKIDKIHPDELIKEIEKYKDLL---PFA--EIVPISALQGNNVDHLVKVI 167 >gi|221482844|gb|EEE21175.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 1054 Score = 42.4 bits (98), Expect = 0.046, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 10/84 (11%) Query: 16 RGVPEIGLLPKAGPPEI-AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +G E L + PP I G NVGKSS+IN L+ K ++ S PG+T+HL V Sbjct: 642 KGSAEDSALLASPPPFIVGLVGFPNVGKSSVINALLGSKKVS-VSRTPGKTRHLQTLVVG 700 Query: 75 DFSNLKNNLPAMALVDMPGYGYAR 98 D + L D PG + R Sbjct: 701 D--------TGLTLCDCPGLVFPR 716 >gi|331002901|ref|ZP_08326414.1| GTP-binding protein Era [Lachnospiraceae oral taxon 107 str. F0167] gi|330413194|gb|EGG92568.1| GTP-binding protein Era [Lachnospiraceae oral taxon 107 str. F0167] Length = 298 Score = 42.4 bits (98), Expect = 0.046, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 26/169 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TSN P T++ + F++ + + +D Sbjct: 6 VALIGRPNVGKSTLMNTLIGQK-IAITSNKPQTTRNR---IQTVFTDERGQI---VFLDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG A+ + G +V+ +S R TLR V + LI+ + + D+ +F L Sbjct: 59 PGIHKAK------NKLGEYMVK-VSTR-TLRDVDMVLWLIEPNTFIGEGDEHIFEILSNL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVK 195 V + + K+D L E +I Y + EV+P S++K Sbjct: 111 EVPVILAINKMDSLKQK------EDMLAVIAKYSSKMKFAEVVPVSALK 153 >gi|320335804|ref|YP_004172515.1| GTP-binding protein engA [Deinococcus maricopensis DSM 21211] gi|319757093|gb|ADV68850.1| GTP-binding protein engA [Deinococcus maricopensis DSM 21211] Length = 441 Score = 42.4 bits (98), Expect = 0.046, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 26/182 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL N LV R+ A ++ PG T+ K+ L N + L+D Sbjct: 3 KVAIVGRPNVGKSSLFNRLVGRRE-AVVADFPGVTRD-----AKEGVMLYQN-HRIVLID 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G D W I R +E + +CV ++D R + D +V +L + Sbjct: 56 TGGLWSG-------DEWEEAI-RQKAEWAMEGAQCVIFVLDPRDDLSAADYEVAEWLRRL 107 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V KID +P + YL + E +P S+ +G++ L +L+ Sbjct: 108 GKPVIVVANKID--NP-------KHDAYLAELWGLGFGEPLPVSAEHARGLDDLMDRVLD 158 Query: 209 TI 210 + Sbjct: 159 YL 160 Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 +P+ P I+ GR NVGKSSL+N + + + S+ PG T+ Sbjct: 167 VPEVAPIRISLIGRPNVGKSSLLNAITGSERVI-VSDVPGTTR 208 >gi|301115166|ref|XP_002905312.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262110101|gb|EEY68153.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 435 Score = 42.4 bits (98), Expect = 0.046, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 I F G NVGKSSL+N L +RK L S PG T+HL ++F + +++ + LV Sbjct: 264 IGFVGEPNVGKSSLLNSLFDRK-LVSVSATPGHTKHLQTHYFERVEMLKRSDDVFSRVLV 322 Query: 90 -DMPGYGYAR 98 D PG + R Sbjct: 323 CDCPGVVFPR 332 >gi|312962901|ref|ZP_07777388.1| GTP-binding protein EngA [Pseudomonas fluorescens WH6] gi|311282928|gb|EFQ61522.1| GTP-binding protein EngA [Pseudomonas fluorescens WH6] Length = 489 Score = 42.4 bits (98), Expect = 0.047, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 188 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDQPGTTRD-SIYIP-----FERN 240 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 241 DEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 298 Query: 143 SFLDKKAVSYQIVLTKIDKLSPT 165 F + + I + K D ++P+ Sbjct: 299 GFALEAGRALVIAINKWDGMTPS 321 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 49/184 (26%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L RT +A + D S L + Sbjct: 3 PVIALVGRPNVGKSTLFN------RLTRTRDA----------IVGDLSGLTRDRQ----- 41 Query: 90 DMPGYGYARAPKKN---VDSWGGL------IVRYLSERSTL-----RCVYLLIDCRHGVK 135 YG A+ ++ VD+ GG+ + ++E+S L V L+D R G Sbjct: 42 ----YGEAKWQGRSYIIVDT-GGISGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYT 96 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 DQ + L K+ ++ KID + P A+ P + IP + Sbjct: 97 AADQMIGEHLRKRNKRSYLIANKIDNIDPEQARAEFS---------PMGLGDAIPIAGAH 147 Query: 196 RKGI 199 +GI Sbjct: 148 GRGI 151 >gi|268680372|ref|YP_003304803.1| ribosome-associated GTPase EngA [Sulfurospirillum deleyianum DSM 6946] gi|268618403|gb|ACZ12768.1| ribosome-associated GTPase EngA [Sulfurospirillum deleyianum DSM 6946] Length = 477 Score = 42.4 bits (98), Expect = 0.047, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 15/149 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N LV ++ A SN G T P D S ++ N + VD Sbjct: 210 VAIIGRVNVGKSSLLNALVGKQR-AVVSNVAGTT-----IDPVDES-IEYNEKVINFVDT 262 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + ++ + + + + ER+ + L++D ++D+ + +++ ++ Sbjct: 263 AGL-RRRGKIEGIEKFALMRTKEMLERANI--ALLVLDASEPFLELDERIAGLVEENNLA 319 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 IVL K D+ A + EK +R+ Sbjct: 320 CIIVLNKWDE-----AMDDFEKVTAEVRH 343 >gi|288575053|ref|ZP_06393410.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570794|gb|EFC92351.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 444 Score = 42.4 bits (98), Expect = 0.047, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 19/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N L+ + A + PG T+ + + ++ + LVD Sbjct: 4 VTIVGRPNVGKSSLFNRLIGERR-AIVDDVPGVTRD------RLYGQVEWRGNSFYLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R ++ G IV+ + E + L +D R G+ +D+D+ + K A Sbjct: 57 GGL-LLRDEDPIMEGMKGQIVQAMEESD---VILLSVDGREGLTWMDEDIAMVIRKSAPK 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 IV+ ++KL E + + Y +V+ S++ +GI+ L + E + Sbjct: 113 PVIVV--VNKLDDMKFDELVYEA------YGLGFQDVVGISAIHARGIDDLLDRVCELL 163 >gi|18310737|ref|NP_562671.1| GTP-binding protein EngA [Clostridium perfringens str. 13] gi|110798819|ref|YP_696441.1| GTP-binding protein EngA [Clostridium perfringens ATCC 13124] gi|110803315|ref|YP_699041.1| GTP-binding protein EngA [Clostridium perfringens SM101] gi|168207282|ref|ZP_02633287.1| putative GTP-binding protein Era [Clostridium perfringens E str. JGS1987] gi|168210612|ref|ZP_02636237.1| putative GTP-binding protein Era [Clostridium perfringens B str. ATCC 3626] gi|168214232|ref|ZP_02639857.1| putative GTP-binding protein Era [Clostridium perfringens CPE str. F4969] gi|168217042|ref|ZP_02642667.1| putative GTP-binding protein Era [Clostridium perfringens NCTC 8239] gi|169342731|ref|ZP_02863772.1| putative GTP-binding protein Era [Clostridium perfringens C str. JGS1495] gi|182625851|ref|ZP_02953617.1| putative GTP-binding protein Era [Clostridium perfringens D str. JGS1721] gi|26006720|sp|Q8XJK1|DER_CLOPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123148666|sp|Q0TPJ9|DER_CLOP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123341699|sp|Q0SS66|DER_CLOPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|18145418|dbj|BAB81461.1| probable GTP binding protein [Clostridium perfringens str. 13] gi|110673466|gb|ABG82453.1| ribosome-associated GTPase EngA [Clostridium perfringens ATCC 13124] gi|110683816|gb|ABG87186.1| ribosome-associated GTPase EngA [Clostridium perfringens SM101] gi|169299237|gb|EDS81307.1| putative GTP-binding protein Era [Clostridium perfringens C str. JGS1495] gi|170661368|gb|EDT14051.1| putative GTP-binding protein Era [Clostridium perfringens E str. JGS1987] gi|170711316|gb|EDT23498.1| putative GTP-binding protein Era [Clostridium perfringens B str. ATCC 3626] gi|170714259|gb|EDT26441.1| putative GTP-binding protein Era [Clostridium perfringens CPE str. F4969] gi|177908885|gb|EDT71377.1| putative GTP-binding protein Era [Clostridium perfringens D str. JGS1721] gi|182380862|gb|EDT78341.1| putative GTP-binding protein Era [Clostridium perfringens NCTC 8239] Length = 438 Score = 42.4 bits (98), Expect = 0.047, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 9/129 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSLIN L+ + + SN PG T+ S L+ LVD Sbjct: 179 IAMIGKPNVGKSSLINRLLGEERVI-VSNVPGTTRD------SIDSYLETEDGKFILVDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + ++R + L+ID G+ + D+ + + + + Sbjct: 232 AGLRRKSKVKEEIERYS--VIRTYAAIEKADVAILVIDAEQGITEQDEKIIGYAHEMNKA 289 Query: 152 YQIVLTKID 160 +V+ K D Sbjct: 290 IMVVVNKWD 298 Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 28/169 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ ++ + PG T+ + ++ N K ++ Sbjct: 4 PIVAMVGRPNVGKSTLFNKLAGKR-ISIVQDTPGVTRD-RVYAESEWLNRK-----FTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G P+ + +IV+ + ++ + + ++D + G+ DQ+V Sbjct: 57 DTGGI----EPESS-----DIIVKQMRRQAQIAIEMADVIVFVVDGKEGLTAADQEVAQM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K +V+ KID+L+ LE+ Y N P I S Sbjct: 108 LRKSKKPVVLVVNKIDRLA-------LEENSYEFYNLGIGDPITISASQ 149 >gi|297617642|ref|YP_003702801.1| ribosome-associated GTPase EngA [Syntrophothermus lipocalidus DSM 12680] gi|297145479|gb|ADI02236.1| ribosome-associated GTPase EngA [Syntrophothermus lipocalidus DSM 12680] Length = 442 Score = 42.4 bits (98), Expect = 0.047, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 18/167 (10%) Query: 21 IGLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 I LLP A E IA GR NVGKSSL+N L+ + + S PG T+ + Sbjct: 161 IALLPPAEEEEKDELAVRIALVGRPNVGKSSLLNRLIGEERVI-VSEIPGTTRDA---ID 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F N L+D G K+ + + L ERS V +++D Sbjct: 217 TPFRYGGNR---YVLIDTAGIRRKSRIKEPTERYSVLRALRAVERSD--VVLIILDATER 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 V + D+ + F+ + S I++ K D + T + T+++ LIR Sbjct: 272 VTEQDKKIAGFVHEAGKSNIIIVNKWDLVKKT--ERTMKEFDDLIRE 316 >gi|206895297|ref|YP_002247145.1| ribosome-associated GTPase EngA [Coprothermobacter proteolyticus DSM 5265] gi|206737914|gb|ACI16992.1| ribosome-associated GTPase EngA [Coprothermobacter proteolyticus DSM 5265] Length = 425 Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 13/166 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR+N GKS+L+N L+ ++ + S PG T L+F + N+K+ + + + D Sbjct: 175 VSVIGRTNAGKSTLMNRLLGKERVL-VSEMPGTT--LDFIT--ETINVKDMV--VEVTDT 227 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL-LIDCRHGVKQIDQDVFSFLDKKAV 150 PG + +V L V+ L R + V + +ID G+ +D+ V +++ + Sbjct: 228 PGLRKGDLRRLSVPEM--LAVKRLENRLRKQQVLIHVIDASVGLTSLDESVIRIAEEEGI 285 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 Y VL KID P A+ L T+ + +P + + +S + Sbjct: 286 GYIAVLNKIDLAEDPRKAESIL--TEAFLDKFPWVDRKAVIAASAE 329 >gi|298490946|ref|YP_003721123.1| tRNA modification GTPase TrmE ['Nostoc azollae' 0708] gi|298232864|gb|ADI64000.1| tRNA modification GTPase TrmE ['Nostoc azollae' 0708] Length = 464 Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 22/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N ++ + A ++ PG T+ + + + +P L D Sbjct: 227 KVAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-D 279 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G + R S V ID G Q DQ+++ + + V Sbjct: 280 TAGI---RETADQVEKIG--VERSRRASSAADLVLFTIDASAGWTQADQEIYEQVKHRPV 334 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID +S Q K + P + I T++ + +GI+ L A+LE + Sbjct: 335 I--LVINKIDLISIAEKQTLQSKIQ-----SPKSK---IVTAAAQNQGIDSLETAVLEIV 384 >gi|239917900|ref|YP_002957458.1| GTP-binding protein Era [Micrococcus luteus NCTC 2665] gi|281413599|ref|ZP_06245341.1| GTP-binding protein EngA [Micrococcus luteus NCTC 2665] gi|239839107|gb|ACS30904.1| GTP-binding protein Era [Micrococcus luteus NCTC 2665] Length = 512 Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 31/187 (16%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP +A GR NVGKS+L+N ++ R+ A + PG T+ + + + N + Sbjct: 74 PPVLAIVGRPNVGKSTLVNRIIGRRE-AVVEDVPGVTRDRVSY------DAEWNGREFTV 126 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH-----GVKQIDQDVFS 143 VD G+ + D+ G I R ++E++ L G+ D+ V S Sbjct: 127 VDTGGWEH--------DAKG--IHRRVAEQAELAVDVADAVVFVVDATVGMTATDEAVVS 176 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L +K + K+D + TL + YP P S+V +G+ L Sbjct: 177 MLRRKDRPVIVAANKVDDMVQEADAATLWSLGF---GYP------YPVSAVHGRGVADLL 227 Query: 204 KAILETI 210 A LE + Sbjct: 228 DAALEAL 234 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 5/46 (10%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNR-----KNLARTSNAP 62 GL+P+ GP IA GR NVGKSSL+N L +LA T+ P Sbjct: 242 GLVPRGGPRRIALVGRPNVGKSSLLNKLAGSDRVVVDDLAGTTRDP 287 >gi|257470080|ref|ZP_05634172.1| GTP-binding protein Era [Fusobacterium ulcerans ATCC 49185] gi|317064304|ref|ZP_07928789.1| GTP binding protein [Fusobacterium ulcerans ATCC 49185] gi|313689980|gb|EFS26815.1| GTP binding protein [Fusobacterium ulcerans ATCC 49185] Length = 297 Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 66/150 (44%), Gaps = 23/150 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN LV+ K +A S+ G T+ N K NL NN +D Sbjct: 6 IAVVGRPNVGKSTLINKLVSEK-VAIVSDKAGTTRD-NI---KGILNLNNN--QYIFIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFS-FL 145 PG A+ L+ Y++ + + + L+D + DQ V + Sbjct: 59 PGIHKAKH----------LLGEYMTNSAIRVLKDVDVILFLLDGSQEISTGDQFVMERVM 108 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + K +V+ KIDKLS E+ K Sbjct: 109 EAKKTPRILVINKIDKLSDEQLAAKREEVK 138 >gi|325192377|emb|CCA26818.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 554 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA----MA 87 + F G NVGKS+L+N L +K L +S PG T+HL D +++ L A + Sbjct: 272 LGFLGEPNVGKSTLLNTLFEKK-LVSSSQTPGHTKHLQSHYFPDVTSVLQGLDAKVEKLQ 330 Query: 88 LVDMPGYGYAR 98 + D PG + R Sbjct: 331 VFDCPGIVFPR 341 >gi|254417083|ref|ZP_05030829.1| GTPase, putative [Microcoleus chthonoplastes PCC 7420] gi|196176061|gb|EDX71079.1| GTPase, putative [Microcoleus chthonoplastes PCC 7420] Length = 461 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 14/166 (8%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +P +G+LP +A GR NVGKSSL+N L K A S+ G T+ + + Sbjct: 165 LPTVGMLPDTSEINVAIVGRPNVGKSSLLNALTGEKR-AIVSSVSGTTRDAIDMIVERPG 223 Query: 78 NLKNNLPAM--ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 N + + L+D G + + + +G I R V ++D GV Sbjct: 224 NPETETESQLYRLIDTAGIRRKKNVEYGPEFFG--INRAFKAIRRADVVLFVVDALDGVT 281 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + DQ + + + + I++ K D +EK Y I Y Sbjct: 282 EQDQKLAGRIAEDGRAAVILVNKWD---------AIEKDTYTIYEY 318 >gi|187934969|ref|YP_001885107.1| GTP-binding protein Era [Clostridium botulinum B str. Eklund 17B] gi|226741198|sp|B2TMB9|ERA_CLOBB RecName: Full=GTPase Era gi|187723122|gb|ACD24343.1| GTP-binding protein Era [Clostridium botulinum B str. Eklund 17B] Length = 295 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 + GR NVGKS+L+N ++ K L+ SN P T++ +D+ + V Sbjct: 7 VTIVGRPNVGKSTLLNYIMGEK-LSIVSNKPQTTRNNIQTILTGEDYQ--------IVFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG PK + + ++ + + V L + + + D+ + L K Sbjct: 58 DTPG---IHKPKHKLGEY--MVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDKK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +VL KID+ +P ++LE + + E++P +++K K ++ L Sbjct: 113 CPVYLVLNKIDESTPERVAKSLE-----MYSSEFNFKEIVPIAAIKGKNVDTL 160 >gi|156603663|ref|XP_001618879.1| hypothetical protein NEMVEDRAFT_v1g153067 [Nematostella vectensis] gi|156200746|gb|EDO26779.1| predicted protein [Nematostella vectensis] Length = 304 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 29/192 (15%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVP 73 PE L + P A GR N GKSS IN L+ N+A T+ T++ F Sbjct: 34 PEEIDLEQEALPRFAVVGRPNAGKSSFINALIGEDRNIVTNIAGTTRDSIDTKYNRFGF- 92 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 DF+ LVD G K++++ + ++R + + L++D G Sbjct: 93 -DFN----------LVDTAGIRKKSKVKEDLEFYS--VMRAVRTIEYSDVIILMVDATRG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPTS 192 + DQ++F +K I++ K D +EK +R+Y A ++ P + Sbjct: 140 FEGQDQNIFWLAEKNKKGVVILINKWD---------LVEKETNTMRDYEAAVRKQIAPFT 190 Query: 193 SVKRKGIEVLRK 204 V + VL K Sbjct: 191 DVPVIFVSVLTK 202 >gi|332971197|gb|EGK10160.1| tRNA modification GTPase TrmE [Desmospora sp. 8437] Length = 458 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 23/173 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L R+N A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 227 GRPNVGKSSLLNALA-RENKAIVTDIPGTTRD----VIEEYVNVR-GIP-LRLVDTAGI- 278 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + R + LL++ HG + + +D L K V Q V Sbjct: 279 --RETEDVVERIG--VERSHQALEGADLILLLLN--HG-ESLSEDDRKLL--KMVRNQTV 329 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + ++K+ + L++ + LI P +I TS ++ +GI+ L +AI++ Sbjct: 330 IVVVNKMDLPRRLD-LQEVRNLIGEAP-----LITTSMIREQGIDPLEEAIVD 376 >gi|289548080|ref|YP_003473068.1| tRNA modification GTPase TrmE [Thermocrinis albus DSM 14484] gi|289181697|gb|ADC88941.1| tRNA modification GTPase TrmE [Thermocrinis albus DSM 14484] Length = 450 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA--LV 89 +A G+ NVGKSSL N L+ + A ++ PG T +DF + N+ + LV Sbjct: 221 LAIVGKPNVGKSSLFNALLGSQR-AIVTDIPGTT--------RDFLQEQWNIGGIPINLV 271 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R V+ G + R + + + V L++D +++ D ++S + K Sbjct: 272 DTAGI---RTTTDPVEQMG--VQRSIEKLGSAHIVLLVVDGSKPLEEEDLSIYSMVKDK- 325 Query: 150 VSYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +VL K D + TA+ A PE + S+ G+E LRK IL Sbjct: 326 -DHIVVLNKKDLGVCEDTAK---------------AFPEFVMVSAKTGDGLEDLRKEILR 369 Query: 209 TINY 212 + Sbjct: 370 RAGF 373 >gi|241117502|ref|XP_002401929.1| cell division protein, putative [Ixodes scapularis] gi|215493243|gb|EEC02884.1| cell division protein, putative [Ixodes scapularis] Length = 250 Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust. Identities = 54/202 (26%), Positives = 81/202 (40%), Gaps = 44/202 (21%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP---------KDFSNL- 79 P + +GRS +GKS+LIN L RTS+ G Q + FVP K S++ Sbjct: 13 PLFSRAGRSGLGKSTLINTLFKANISRRTSSKKG--QEASEFVPYVVPKTTEVKSISHVI 70 Query: 80 --KNNLPAMALVDMPGYGYARA--PKKNVDSWGGLI-------VRYLSERSTLR------ 122 K + + D PG+G P SW ++ +YLSE ++ Sbjct: 71 EEKGTRLRLTVTDTPGFGDQECMFPC----SWLPILEYINEQYEKYLSEEQSVTRKKHIP 126 Query: 123 ------CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 C+Y + H + +D + LD K V+ V+ K D L+ +K K Sbjct: 127 DTRVHCCLYFVPPSGHSLTPLDVEFMKRLD-KCVNIVPVIAKADTLTIEERNNFKQKAKD 185 Query: 177 LIRN----YPTAHPEVIPTSSV 194 L RN YP E P ++ Sbjct: 186 LARNGICVYPVQEFEDDPEETI 207 >gi|319943736|ref|ZP_08018017.1| GTP-binding protein EngA [Lautropia mirabilis ATCC 51599] gi|319742969|gb|EFV95375.1| GTP-binding protein EngA [Lautropia mirabilis ATCC 51599] Length = 504 Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR N GKS+LIN L+ + L N PG T+ + DF + L Sbjct: 237 PVRVAVVGRPNGGKSTLINALLGEERLI-AFNQPGTTRD---SITVDFRYRNRD---YQL 289 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +V+ L L+ID G+ + D + ++ + Sbjct: 290 IDTAGLRRRGKVHETVEKFS--VVKTLQAIEDCNVAVLMIDAADGISEQDSAIAGYILEA 347 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + I L K D + + L++ + R Y ++ S++K + ++ L KA+ E Sbjct: 348 GRALVIALNKWDAVPADERRNVLQECQR--RLYFLDWAPMLTISALKNRALDKLMKAVDE 405 Query: 209 T 209 Sbjct: 406 A 406 >gi|320109421|ref|YP_004185011.1| tRNA modification GTPase TrmE [Terriglobus saanensis SP1PR4] gi|319927942|gb|ADV85017.1| tRNA modification GTPase TrmE [Terriglobus saanensis SP1PR4] Length = 449 Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 31/179 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR N GKSSL N L R+ T A G T+ + V + S +P + L+D Sbjct: 223 IAVIGRPNAGKSSLFNALAERERAIVTPIA-GTTRDV---VTERVS--IGGIP-VELMDT 275 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + V+ G I R + V ++D +HG+ + +++ + L+ + Sbjct: 276 AGL---RESEDFVEQLG--IARSREALAEADLVLFIVDLQHGISEEERETIASLEGR--P 328 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + +V KID L+P A + +IPTS+ +G++ LR+A+L+ + Sbjct: 329 HLVVANKID-LAPLLASDF----------------ALIPTSANTGEGLDRLREALLQQL 370 >gi|289706512|ref|ZP_06502865.1| ribosome-associated GTPase EngA [Micrococcus luteus SK58] gi|289556770|gb|EFD50108.1| ribosome-associated GTPase EngA [Micrococcus luteus SK58] Length = 512 Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 31/187 (16%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP +A GR NVGKS+L+N ++ R+ A + PG T+ + + + N + Sbjct: 74 PPVLAIVGRPNVGKSTLVNRIIGRRE-AVVEDVPGVTRDRVSY------DAEWNGREFTV 126 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH-----GVKQIDQDVFS 143 VD G+ + D+ G I R ++E++ L G+ D+ V S Sbjct: 127 VDTGGWEH--------DAKG--IHRRVAEQAELAVDVADAVVFVVDATVGMTATDEAVVS 176 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L +K + K+D + TL + YP P S+V +G+ L Sbjct: 177 MLRRKDRPVIVAANKVDDMVQEADAATLWSLGF---GYP------YPVSAVHGRGVADLL 227 Query: 204 KAILETI 210 A LE + Sbjct: 228 DAALEAL 234 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 5/46 (10%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNR-----KNLARTSNAP 62 GL+P+ GP IA GR NVGKSSL+N L +LA T+ P Sbjct: 242 GLVPRGGPRRIALVGRPNVGKSSLLNKLAGSDRVVVDDLAGTTRDP 287 >gi|255037605|ref|YP_003088226.1| small GTP-binding protein [Dyadobacter fermentans DSM 18053] gi|254950361|gb|ACT95061.1| small GTP-binding protein [Dyadobacter fermentans DSM 18053] Length = 436 Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 14/185 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G P IA GR NVGKSS +N+L + + ++ G T +D + N Sbjct: 172 PEEGIPRIAIMGRPNVGKSSFLNVLTG-TDRSIVTDIAGTT--------RDAIHTHYNAF 222 Query: 85 AM--ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 M L D G K++++ + L E S + C+ LL D G++ D ++ Sbjct: 223 GMNFILTDTAGIRRKSRVKEDIEFYSTLRSVKAMEESDV-CIVLL-DATLGLEGQDMNII 280 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EV 201 DK I++ K D + + K L + P + +I S V+++ I +V Sbjct: 281 GQADKAKKGIVIMVNKWDLVEKDSKTADQYKKALLEKLAPMNYMPIIFASVVEKQRIHQV 340 Query: 202 LRKAI 206 + KA+ Sbjct: 341 MEKAM 345 >gi|77460818|ref|YP_350325.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf0-1] gi|123603396|sp|Q3K7C0|DER_PSEPF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|77384821|gb|ABA76334.1| GTP-binding protein [Pseudomonas fluorescens Pf0-1] Length = 490 Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + PG T+ + ++P + N Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVI-VYDQPGTTRD-SIYIP-----FERN 241 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 242 DEKYTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSPT 165 F + + I + K D ++P+ Sbjct: 300 GFALEAGRALVIAINKWDGMTPS 322 Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D + G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K+ +V K+D + P A+ P IP + +GI L + Sbjct: 106 LRKRNKRSHVVANKVDNIDPEMARAEFA---------PLGMGHAIPIAGAHGRGITQLLE 156 Query: 205 AIL 207 A L Sbjct: 157 AAL 159 >gi|18310997|ref|NP_562931.1| GTP-binding protein Era [Clostridium perfringens str. 13] gi|21263575|sp|Q8XIU8|ERA_CLOPE RecName: Full=GTPase Era gi|18145679|dbj|BAB81721.1| GTP-binding protein [Clostridium perfringens str. 13] Length = 296 Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 I GR NVGKS+L N+L+ K L+ SN P T++ D+ M V Sbjct: 7 ITIVGRPNVGKSTLTNLLMGEK-LSIVSNKPQTTRNNIQTILTGDDYQ--------MIFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG PK + + ++ + V L + V + D+ + L + Sbjct: 58 DTPG---IHKPKHKLGEY--MVNSATDSIKDVDLVLFLSNPCEEVGRGDKFIVEQLKNQK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 VL K+D+ SP +TLE + Y A E+IP S++K K + L Sbjct: 113 APVIFVLNKVDESSPEKVAKTLE---LFSKEYDFA--EMIPISAMKAKNTDKL 160 >gi|212212370|ref|YP_002303306.1| GTP-binding protein EngA [Coxiella burnetii CbuG_Q212] gi|238058972|sp|B6IZN3|DER_COXB2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|212010780|gb|ACJ18161.1| GTP-binding protein [Coxiella burnetii CbuG_Q212] Length = 443 Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 20/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ PG V +D + + + L+ Sbjct: 3 PVIAIVGRPNVGKSTLFNYL-TKSRAALVADVPG--------VTRDRQYGETTIDSQRLL 53 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 + G K V V + S C+ L+D + G+ D+ + L KK Sbjct: 54 LVDTGGLVDTENKEVAPLAETQVEQAIDESD--CILFLVDAKAGLVPADEIIAERLHKKG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K D+ Q K + P VI +S +G++ L +LE Sbjct: 112 KKIFLAVNKADRARAAVVQSDFYKLGF-------GEPYVIAAAS--GRGVKDLMTQVLEN 162 Query: 210 I 210 + Sbjct: 163 L 163 Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN L+ + + + PG T+ + ++P N L+D Sbjct: 177 KIAMIGRPNVGKSTLINRLLGEERVI-VYDQPGTTRD-SIYIP-----FARNDENYTLID 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + +++ L V L+D R GV + D + + + + V Sbjct: 230 TAGIRRRAKIQDYVEKFS--MIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGV 287 Query: 151 SYQIVLTKIDKLS 163 S I + K D L+ Sbjct: 288 SLIIAVNKWDGLN 300 >gi|325186692|emb|CCA21240.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1963 Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++L+D R G+ +DQ+ FL++ YQI+LTKID + T + LI Sbjct: 36 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAVRAEWPMLTFDTMPLLI 89 >gi|325114269|emb|CBZ49826.1| GTP-binding protein, related [Neospora caninum Liverpool] Length = 1058 Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 10/75 (13%) Query: 25 PKAGPPEI-AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P A PP I G NVGKSS+IN L+ K ++ S PG+T+HL + D Sbjct: 648 PHAPPPFIIGLIGFPNVGKSSVINALLGSKKVS-VSRQPGKTRHLQTLLVGD-------- 698 Query: 84 PAMALVDMPGYGYAR 98 + L D PG + R Sbjct: 699 TGLTLCDCPGLVFPR 713 >gi|145627915|ref|ZP_01783716.1| GTPase EngB [Haemophilus influenzae 22.1-21] gi|144979690|gb|EDJ89349.1| GTPase EngB [Haemophilus influenzae 22.1-21] Length = 67 Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 27/43 (62%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLA 56 FL P I +P+ EIAF+GRSN GKS+ +N L N+K + Sbjct: 13 FLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKKFS 55 >gi|160903293|ref|YP_001568874.1| small GTP-binding protein [Petrotoga mobilis SJ95] gi|160360937|gb|ABX32551.1| small GTP-binding protein [Petrotoga mobilis SJ95] Length = 398 Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 28/139 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA +GR NVGKSSLIN +VN++ +A SN G T P S + + L+D Sbjct: 11 IAIAGRRNVGKSSLINAIVNQE-IALVSNVAGTTTD-----PVYKSMELQPIGPVTLIDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY------LLIDCR-HGVKQIDQDVFSF 144 PG +D G L + + ER+ R Y L++D +G + D+F Sbjct: 65 PG----------IDDEGELGKKRI-ERAK-RAFYKADVGVLVVDSEPNGFEHSICDLF-- 110 Query: 145 LDKKAVSYQIVLTKIDKLS 163 +K + + IVL KID+L+ Sbjct: 111 -EKMNIPFIIVLNKIDQLN 128 >gi|261749630|ref|YP_003257316.1| putative cell growth GTP-binding protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497723|gb|ACX84173.1| putative GTP-binding protein (cell growth-related) [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 305 Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 23/191 (12%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 L+ K+G I G NVGKS+L+N LV ++L+ ++ P T+H + ++ Sbjct: 6 LIHKSGFVNII--GFPNVGKSTLMNSLVG-EDLSIITHKPQTTRHRILGIVDKYN----- 57 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + D PG+ A ++++Y+ ERS +L G I F Sbjct: 58 -AQIIFSDTPGFMIKTAF-----FMQRIMMKYI-ERSLEDADIVLFTTEIGKFSISDKYF 110 Query: 143 SFLD-----KKAVSYQIVLTKIDKLSPTTAQETL-EKTKYLIRNYPTAHPEVIPTSSVKR 196 S L+ K + I++ KIDK+ ++ L E Y R +P H E++P S++K Sbjct: 111 SILNSLKNIKNNKPFLILINKIDKIGIECDEKILYETINYWHRIFP--HSEILPISALKN 168 Query: 197 KGIEVLRKAIL 207 ++L IL Sbjct: 169 INQDLLMDKIL 179 >gi|325846391|ref|ZP_08169360.1| tRNA modification GTPase TrmE [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481575|gb|EGC84615.1| tRNA modification GTPase TrmE [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 454 Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 27/187 (14%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G L K G E G+ NVGKSSL+N+L+N +N A ++ PG T+ ++ NL N Sbjct: 214 GKLVKDGI-ETTIIGKPNVGKSSLLNVLLN-ENRAIVTDIPGTTRD----SITEYINLGN 267 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + + D G R V+ G + L++ + L + + D + + D+ + Sbjct: 268 --LTLKINDTAGI---RETHDEVEKIGVQRSKELAKGADL--IIAIFDRSREIDEEDKII 320 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L K + I+L KID L ++E +K +I TS V R GI+ Sbjct: 321 LDLL--KGKNAIIILNKID-LDSKISKEDFDK-----------DFTIIETSMVSRDGIDK 366 Query: 202 LRKAILE 208 L AI + Sbjct: 367 LEGAIFD 373 >gi|271501567|ref|YP_003334593.1| ribosome-associated GTPase EngA [Dickeya dadantii Ech586] gi|270345122|gb|ACZ77887.1| ribosome-associated GTPase EngA [Dickeya dadantii Ech586] Length = 498 Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + L Sbjct: 210 PIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRD-SIYIP-----MERDGRDYVL 262 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G V+ + +++ L V L+ID R G+ D + F+ Sbjct: 263 IDTAGVRKRGKITDTVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGFILNS 320 Query: 149 AVSYQIVLTKIDKLSPTTAQETLE 172 S IV+ K D L+ + E Sbjct: 321 GRSLVIVVNKWDGLTQEVKDQVKE 344 >gi|221502541|gb|EEE28268.1| translation initiation factor IF-2, putative [Toxoplasma gondii VEG] Length = 1140 Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 24/142 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVP-------KDFSNLK 80 P + G + GK+ L++ + R + + A G TQ + +F P + FS + Sbjct: 546 PIVCILGHVDTGKTKLLDKI--RHTNVQDNEAGGITQQIGATYFPPEALVEQCRKFSKAE 603 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LP + ++D PG+ S+ L R S +++D HG++Q ++ Sbjct: 604 LRLPGLLIIDTPGHS----------SFTNLRARG---SSLCDLAIVVVDIMHGMEQQTRE 650 Query: 141 VFSFLDKKAVSYQIVLTKIDKL 162 L +K + I L KID+L Sbjct: 651 SLELLKQKKCPFIIALNKIDRL 672 >gi|315637972|ref|ZP_07893157.1| ribosome-associated GTPase EngA [Campylobacter upsaliensis JV21] gi|315481820|gb|EFU72439.1| ribosome-associated GTPase EngA [Campylobacter upsaliensis JV21] Length = 459 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 20/183 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I GR NVGKSSL+N LV + +S A +N V K+ L + +D Sbjct: 198 KIGIVGRVNVGKSSLLNALVKEQRSVVSSIAGTTIDPVNESVM-----YKDKL--LEFID 250 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + E S + L++D G ++D+ + + K + Sbjct: 251 TAGI-RKRGKIQGLERFALNRTEKMLENS--QIALLVLDANEGFNELDERIAGLISKHYL 307 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK + L++ K+L AH +I S++ K + +L I Sbjct: 308 GVIIVLNKWDKTRYEFDKVVKELRLDRFKFL------AHAPIISVSALSGKRVHILMDKI 361 Query: 207 LET 209 LE Sbjct: 362 LEV 364 >gi|325180042|emb|CCA14444.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1944 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++L+D R G+ +DQ+ FL++ YQI+LTKID + T + LI Sbjct: 36 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAVRAEWPMLTFDTMPLLI 89 >gi|256825342|ref|YP_003149302.1| small GTP-binding domain-containing protein [Kytococcus sedentarius DSM 20547] gi|256688735|gb|ACV06537.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Kytococcus sedentarius DSM 20547] Length = 527 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 22/138 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L+N + R+ A + PG T+ + P ++ N +P M + Sbjct: 92 PVVAIVGRPNVGKSTLVNRFLGRRE-AVVQDEPGVTRDRVTY-PAEW----NGVPFMVM- 144 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G+ +D+ G I +++++++ + V ++D G D+DV Sbjct: 145 DTGGW--------EIDAKG--IQKHVAQQAEVAVELADVVIFVVDATVGATDADEDVVKL 194 Query: 145 LDKKAVSYQIVLTKIDKL 162 L + +V K+D L Sbjct: 195 LRRSRKPVLLVANKVDDL 212 >gi|193212055|ref|YP_001998008.1| ribosome small subunit-dependent GTPase A [Chlorobaculum parvum NCIB 8327] gi|254766356|sp|B3QL20|RSGA_CHLP8 RecName: Full=Putative ribosome biogenesis GTPase RsgA gi|193085532|gb|ACF10808.1| ribosome small subunit-dependent GTPase A [Chlorobaculum parvum NCIB 8327] Length = 311 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 15/107 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA-LVDM 91 AFSG S VGKS+LIN+LV R+ L RT+ G+T V S+ LP ++D Sbjct: 185 AFSGHSGVGKSTLINLLVGREEL-RTAETSGKTGK---GVHTTTSSAMFQLPGGGYVIDT 240 Query: 92 PG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 PG + A ++N+ + +R++ E C + C H V+ Sbjct: 241 PGIREFNLAGITRENLRFYYTEFLRFMPE-----CAF--SSCSHTVE 280 >gi|28211008|ref|NP_781952.1| GTP-binding protein [Clostridium tetani E88] gi|28203447|gb|AAO35889.1| GTP-binding protein [Clostridium tetani E88] Length = 396 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 29/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK IAF GR N GKSS+IN + N++ ++ SN G T + + F + Sbjct: 5 PKGNRIHIAFLGRRNAGKSSIINAISNQQ-VSIVSNVAGTTTDPVYKAMELFP-----IG 58 Query: 85 AMALVDMPGY---GYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQD 140 + L+D G GY G L + E + + IDC++ + + Sbjct: 59 PIMLIDTAGLDDEGY----------IGNLRIEKTKEIMNKTDIAVIAIDCKNENFEYEMY 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + L K+ + I L KIDK++ E + + + N ++ S+++R+ I+ Sbjct: 109 LKEKLSKRKIPTIIALNKIDKVA--NLDEAIVRARKQFDN-------IVSISALRRENID 159 Query: 201 VLRKAILETI 210 L++ I+E + Sbjct: 160 KLKEKIIEQV 169 >gi|325180052|emb|CCA14454.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1937 Score = 42.0 bits (97), Expect = 0.055, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++L+D R G+ +DQ+ FL++ YQI+LTKID + T + LI Sbjct: 18 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAVRAEWPMLTFDTMPLLI 71 >gi|327478835|gb|AEA82145.1| selenocysteine-specific elongation factor [Pseudomonas stutzeri DSM 4166] Length = 638 Score = 42.0 bits (97), Expect = 0.055, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 1/95 (1%) Query: 115 LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV-LTKIDKLSPTTAQETLEK 173 L+ S + CV L++ GV ++ + ++ + +V LTKID++ P E ++ Sbjct: 69 LAGASGIDCVLLVVAADDGVMPQTREHLAIVELLGIRRALVALTKIDRVEPARIAEVEQQ 128 Query: 174 TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + L+ A + P SS++ GI+ LR A+++ Sbjct: 129 IENLLAAGALAGTPIFPVSSIRGDGIDALRAALID 163 >gi|325180044|emb|CCA14446.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1952 Score = 42.0 bits (97), Expect = 0.055, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++L+D R G+ +DQ+ FL++ YQI+LTKID + T + LI Sbjct: 36 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAVRAEWPMLTFDTMPLLI 89 >gi|171473922|gb|AAX24378.3| SJCHGC03456 protein [Schistosoma japonicum] Length = 221 Score = 42.0 bits (97), Expect = 0.055, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 7/72 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMA 87 P I F G NVGKSS +N ++ K +A S PG+T+H +V D + + P + Sbjct: 138 PLTIGFIGYPNVGKSSTLNAILGHKKVA-VSVTPGKTKHFQTIYVRSDL--ILCDCPGLV 194 Query: 88 LVDMPGYGYARA 99 MP + Y+RA Sbjct: 195 ---MPSFAYSRA 203 >gi|74316616|ref|YP_314356.1| GTP-binding protein EngA [Thiobacillus denitrificans ATCC 25259] gi|123773049|sp|Q3SL66|DER_THIDA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|74056111|gb|AAZ96551.1| GTP-binding protein [Thiobacillus denitrificans ATCC 25259] Length = 469 Score = 42.0 bits (97), Expect = 0.055, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 11/179 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P+IA GR NVGKS+L+N LV + + + PG T+ + +V DF + P + Sbjct: 174 GVPKIALVGRPNVGKSTLVNALVGAERVI-AFDQPGTTRD-SIYV--DFE--RGGKPYV- 226 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G + V+ + +++ L V L++D R + + D + F+ + Sbjct: 227 LIDTAGVRRRGKVFETVEKFS--VIKTLQAIEDANVVVLVLDARENISEQDAHLAGFVLE 284 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K D LS + + A I S++K KG+E L K I Sbjct: 285 TGRALVVAINKWDGLSAEQRDDVKRDIGRKLAFLDFARFNYI--SALKAKGLENLLKDI 341 >gi|325180051|emb|CCA14453.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1953 Score = 42.0 bits (97), Expect = 0.056, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++L+D R G+ +DQ+ FL++ YQI+LTKID + T + LI Sbjct: 18 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAVRAEWPMLTFDTMPLLI 71 >gi|213418595|ref|ZP_03351661.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 320 Score = 42.0 bits (97), Expect = 0.056, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 9/138 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++P Sbjct: 192 PEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP----- 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 245 MERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 302 Query: 139 QDVFSFLDKKAVSYQIVL 156 + F+ S IV+ Sbjct: 303 LSLLGFILNSGRSLVIVV 320 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|332703981|ref|ZP_08424069.1| GTP-binding protein engA [Desulfovibrio africanus str. Walvis Bay] gi|332554130|gb|EGJ51174.1| GTP-binding protein engA [Desulfovibrio africanus str. Walvis Bay] Length = 443 Score = 42.0 bits (97), Expect = 0.056, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 13/158 (8%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 T+ + A L VPE L IAF G+ N GKSSL+N L + S G Sbjct: 155 TLREQIADFLLADVPEEEDLTAEQGLRIAFLGKPNAGKSSLVNSLTGSDRVI-VSPVAGT 213 Query: 65 TQHLNFFVPKDFSNLKNNLPA--MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 T +D ++ + VD G + N++ + ++R L + Sbjct: 214 T--------RDSVDVTFEVEGKRYTFVDTAGVRKRTKIEDNLEQFS--VLRALKASKKAQ 263 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 L++D + G+ D+ + SFL+K+ + V+ K+D Sbjct: 264 ITVLVLDAQAGMTTQDKKLLSFLEKEKTPFIAVINKMD 301 Score = 42.0 bits (97), Expect = 0.058, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 10/132 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L+ R+ A T + PG T+ + D K +A Sbjct: 2 PATVAIIGRPNVGKSTLFNRLL-RREAAITHDRPGVTRD-RIYAETDLGGRK-----VAF 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ D + + + L++D R G+ +D+ V +F+ Sbjct: 55 VDTGGL---EMEEQVEDIQAAIFAQAREAVKESHGILLVMDGREGLTALDERVAAFIRTS 111 Query: 149 AVSYQIVLTKID 160 + + KID Sbjct: 112 NKPVLLAVNKID 123 >gi|317484901|ref|ZP_07943790.1| ribosome-associated GTPase EngA [Bilophila wadsworthia 3_1_6] gi|316923839|gb|EFV45036.1| ribosome-associated GTPase EngA [Bilophila wadsworthia 3_1_6] Length = 452 Score = 42.0 bits (97), Expect = 0.056, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 2/135 (1%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA GR NVGKS+L N L+ R N A T + PG T+ V + S L V Sbjct: 3 PKIALLGRPNVGKSTLFNRLI-RSNRAITHDRPGVTRDRMEGVVRSRSGRSFTLIDTGGV 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY-LLIDCRHGVKQIDQDVFSFLDKK 148 + + + + + I++ V+ L++D R G+ D+ + SF+ + Sbjct: 62 TLDSHHSVADGPEGLRGFEAEILQQTQAAMDEASVFCLVVDGRDGLMPFDEHLASFVRRA 121 Query: 149 AVSYQIVLTKIDKLS 163 +V+ K+D + Sbjct: 122 GKPTLLVVNKVDGME 136 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 24/190 (12%) Query: 21 IGLLPKAGP-----PE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + LLP P PE +A GR N GKSSL+N ++ + S+ G T+ + Sbjct: 171 VDLLPVEDPDAEAKPENVLRLAMLGRPNAGKSSLVNAMIGEDRMI-VSDVAGTTRD-SVD 228 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL-LIDC 130 +P ++ A VD G R + D+ V + +T V L +ID Sbjct: 229 IP-----FVSDGRACEFVDTAG---VRRRTRITDTVERFSVNSSLKTTTKADVTLYVIDA 280 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVI 189 GV D+ + LD++ + I++ KID L Q LEK K +++ P H V+ Sbjct: 281 LEGVTAQDKRLIDLLDERKTPFMILVNKID-LVGRKEQAALEKNFKEVLQFCP--HVPVL 337 Query: 190 PTSSVKRKGI 199 S++K+ G+ Sbjct: 338 MVSAMKQVGL 347 >gi|237842925|ref|XP_002370760.1| translation initiation factor IF-2, putative [Toxoplasma gondii ME49] gi|211968424|gb|EEB03620.1| translation initiation factor IF-2, putative [Toxoplasma gondii ME49] Length = 1144 Score = 42.0 bits (97), Expect = 0.056, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 24/142 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVP-------KDFSNLK 80 P + G + GK+ L++ + R + + A G TQ + +F P + FS + Sbjct: 550 PIVCILGHVDTGKTKLLDKI--RHTNVQDNEAGGITQQIGATYFPPEALVEQCRKFSKAE 607 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LP + ++D PG+ S+ L R S +++D HG++Q ++ Sbjct: 608 LRLPGLLIIDTPGHS----------SFTNLRARG---SSLCDLAIVVVDIMHGMEQQTRE 654 Query: 141 VFSFLDKKAVSYQIVLTKIDKL 162 L +K + I L KID+L Sbjct: 655 SLELLKQKKCPFIIALNKIDRL 676 >gi|152987216|ref|YP_001350847.1| selenocysteine-specific elongation factor [Pseudomonas aeruginosa PA7] gi|150962374|gb|ABR84399.1| selenocysteine-specific translation elongation factor [Pseudomonas aeruginosa PA7] Length = 641 Score = 42.0 bits (97), Expect = 0.056, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +G + GK+SL+ L + R + G T L + +++L + P +D Sbjct: 3 VGTAGHIDHGKTSLLRALTGIEGDRRPAERQRGITIDLGYL----YADLGDGSPT-GFID 57 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ + L+ S + CV L++ G+ ++ S ++ + Sbjct: 58 VPGHER-------------FVHNMLAGASGIDCVLLVVAADDGLMPQTREHLSIVELLGI 104 Query: 151 SYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V LTKID++ P Q+ + ++L+ + P A + P SS +G+ LR+A+ Sbjct: 105 RRALVALTKIDRVEPQRVQQVQIQVEHLLASGPLARSPIFPLSSSSGEGVAALREAL 161 >gi|325180048|emb|CCA14450.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1934 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++L+D R G+ +DQ+ FL++ YQI+LTKID + T + LI Sbjct: 18 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAVRAEWPMLTFDTMPLLI 71 >gi|255320779|ref|ZP_05361954.1| GTP-binding protein Era [Acinetobacter radioresistens SK82] gi|262379445|ref|ZP_06072601.1| GTP-binding protein Era [Acinetobacter radioresistens SH164] gi|255302156|gb|EET81398.1| GTP-binding protein Era [Acinetobacter radioresistens SK82] gi|262298902|gb|EEY86815.1| GTP-binding protein Era [Acinetobacter radioresistens SH164] Length = 342 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 24/179 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRH-------KIIGIDSREKSQAVYVD 93 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDK 147 PG KK V + ++ R + S LR V L ++D H Q D V L Sbjct: 94 TPGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVVDA-HKWTQNDDLVLEKLKN 145 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V+ KID + L + + + N+ E++P S+++ +E LR I Sbjct: 146 AEMPVILVINKIDTIEEKRTLLPLIQERTKLMNF----VEIVPVSALRGANLEHLRDTI 200 >gi|220929546|ref|YP_002506455.1| GTP-binding protein EngA [Clostridium cellulolyticum H10] gi|254783147|sp|B8I442|DER_CLOCE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219999874|gb|ACL76475.1| small GTP-binding protein [Clostridium cellulolyticum H10] Length = 441 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 13/149 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 ++A G+ N GKSSLIN ++ +N SN PG T+ ++ V KD + Sbjct: 179 KVAVVGKPNAGKSSLINSILG-ENRVIVSNIPGTTRDAIDTHVEKDGQKY-------TFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G +N++ + + ER+ + C+ ++ID GV + D + + ++ Sbjct: 231 DTAGIRRRSKISENIEKYSTIRSWTAVERADV-CL-IMIDAEDGVTEQDTKIAGYAHQQG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + IV+ K D + T TLE+ + ++ Sbjct: 289 KASIIVINKWDLIEKQTG--TLEEYRKVV 315 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 23/142 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+ N L + ++ + PG T+ + ++ N K Sbjct: 2 GKPVVAVVGRPNVGKSTFFNYLAGSR-ISIVEDTPGVTRD-RIYTEIEWRNTK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSER------STLRCVYLLIDCRHGVKQIDQDV 141 L+D G ++ + I+ +R T + ++D + G+ D++V Sbjct: 55 LIDTGG----------IEPYSEDIIMQQMKRQAEIAIETADVIIFMVDAKDGMTATDKEV 104 Query: 142 FSFLDKKAVSYQIVLTKIDKLS 163 + L K + + K+D++ Sbjct: 105 ATMLRKSQKPVVLCVNKVDRVG 126 >gi|325180050|emb|CCA14452.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1926 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++L+D R G+ +DQ+ FL++ YQI+LTKID + T + LI Sbjct: 18 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAVRAEWPMLTFDTMPLLI 71 >gi|325180047|emb|CCA14449.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1945 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 30/54 (55%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 ++L+D R G+ +DQ+ FL++ YQI+LTKID + T + LI Sbjct: 18 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAVRAEWPMLTFDTMPLLI 71 >gi|238924644|ref|YP_002938160.1| GTP-binding protein EngA [Eubacterium rectale ATCC 33656] gi|259645876|sp|C4ZD63|DER_EUBR3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238876319|gb|ACR76026.1| GTP-binding protein EngA [Eubacterium rectale ATCC 33656] gi|291525305|emb|CBK90892.1| ribosome-associated GTPase EngA [Eubacterium rectale DSM 17629] gi|291529236|emb|CBK94822.1| ribosome-associated GTPase EngA [Eubacterium rectale M104/1] Length = 441 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 11/169 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G+ NVGKSSLIN L R++ S+ G T+ + +K + + Sbjct: 178 PRVAIVGKPNVGKSSLINKLA-REDRVIVSDIAGTTRDAI------DTAIKYDGKEYIFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + I+R +S V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKNKIKEDIERYS--IIRAVSAVERADVVIVVIDATEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 I + K D + T ++ EK + ++ P A I S +R Sbjct: 289 KGIIIAVNKWDAIEKDNNTVKQHTEKIRQILSFIPYAEILFISAKSGQR 337 >gi|149277444|ref|ZP_01883585.1| GTP-binding protein EngA [Pedobacter sp. BAL39] gi|149231677|gb|EDM37055.1| GTP-binding protein EngA [Pedobacter sp. BAL39] Length = 433 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 15/134 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAM 86 P+I GR NVGKSSLIN L+ ++ T A G T+ H+++ F + Sbjct: 174 PKITIVGRPNVGKSSLINALIGKERNIVTPIA-GTTRDSIHIHY---NQFGH------EF 223 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D G K+N++ + ++R + V L+ID G++ D ++F + Sbjct: 224 MFIDTAGLRKKTKVKENIEFYS--VMRTIKALEEADVVVLMIDAMEGLESQDVNIFHLAE 281 Query: 147 KKAVSYQIVLTKID 160 K I++ K D Sbjct: 282 KNKKGIVILVNKWD 295 >gi|297822517|ref|XP_002879141.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297324980|gb|EFH55400.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 460 Score = 42.0 bits (97), Expect = 0.058, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 25/143 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVPKDF--------SNL 79 P G + GK+ +++ ++ R + A G TQ + + ++ S+ Sbjct: 17 PICCIMGHIDTGKTKMLDYIIGRN--VQEGEAGGTTQKIGATYLSARNILEKTMELKSDA 74 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K N+P + +D PGY + N+ S G + + L++D HG + Sbjct: 75 KLNVPGLLFIDTPGYEFFM----NLRSRGLSLCDF---------AILVVDIMHGFEPQTI 121 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 + + L K+ + + I LTK+D+L Sbjct: 122 ECLNLLKKRNIEFIIALTKVDRL 144 >gi|221482075|gb|EEE20436.1| translation initiation factor IF-2, putative [Toxoplasma gondii GT1] Length = 1146 Score = 42.0 bits (97), Expect = 0.058, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 24/142 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVP-------KDFSNLK 80 P + G + GK+ L++ + R + + A G TQ + +F P + FS + Sbjct: 552 PIVCILGHVDTGKTKLLDKI--RHTNVQDNEAGGITQQIGATYFPPEALVEQCRKFSKAE 609 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LP + ++D PG+ S+ L R S +++D HG++Q ++ Sbjct: 610 LRLPGLLIIDTPGHS----------SFTNLRARG---SSLCDLAIVVVDIMHGMEQQTRE 656 Query: 141 VFSFLDKKAVSYQIVLTKIDKL 162 L +K + I L KID+L Sbjct: 657 SLELLKQKKCPFIIALNKIDRL 678 >gi|94676730|ref|YP_588490.1| GTP-binding protein EngA [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|166224308|sp|Q1LU74|DER_BAUCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|94219880|gb|ABF14039.1| GTP-binding protein EngA [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 472 Score = 42.0 bits (97), Expect = 0.058, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 47/191 (24%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + H N + D+S L + Sbjct: 3 PIIALVGRPNVGKSTLFN----------------KLTHTNDAIVADYSGLTRD------- 39 Query: 90 DMPGYGYARAPKKN---VDSWG------GLIVRYLSER----STLRCVYLLIDCRHGVKQ 136 YG+A+ N +D+ G GL + + + ++ ++D G+ Sbjct: 40 --RKYGHAKWKNYNFIVIDTGGIGISKKGLAIHIIKQSLLAIKEADVIFFVVDAITGLMI 97 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 DQ + +L K I++ KID + T + ++ Y ++ P ++++ Sbjct: 98 EDQSIAKYLRKLQKPTFIIINKIDGIDITQVK---------LQFYAINIGQIFPIAALQG 148 Query: 197 KGIEVLRKAIL 207 +GI +L KA+ Sbjct: 149 RGINILLKAVF 159 >gi|289434744|ref|YP_003464616.1| GTP-binding protein Era [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170988|emb|CBH27530.1| GTP-binding protein Era [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313633219|gb|EFS00091.1| GTP-binding protein Era [Listeria seeligeri FSL N1-067] Length = 301 Score = 42.0 bits (97), Expect = 0.058, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ L+ + +Y +ID G + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +++ KID +SP + +E+ + L+ E+IP S+++ Sbjct: 117 PVFLLINKIDLISPEELFKLIEQYRELL-----DFEEIIPISALQ 156 >gi|194246477|ref|YP_002004116.1| hypothetical protein ATP_00076 [Candidatus Phytoplasma mali] gi|193806834|emb|CAP18263.1| conserved hypothetical protein [Candidatus Phytoplasma mali] Length = 289 Score = 42.0 bits (97), Expect = 0.058, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 10/66 (15%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P ++ G NVGKS+LIN L+NRK + +T+N PG T++ + N KN Sbjct: 114 NPLKMMVVGIPNVGKSTLINKLINRK-VVKTANIPGLTKNFQWL------NYKN---VFK 163 Query: 88 LVDMPG 93 L+D PG Sbjct: 164 LLDTPG 169 >gi|312880030|ref|ZP_07739830.1| GTP-binding protein Era [Aminomonas paucivorans DSM 12260] gi|310783321|gb|EFQ23719.1| GTP-binding protein Era [Aminomonas paucivorans DSM 12260] Length = 308 Score = 42.0 bits (97), Expect = 0.059, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 23/175 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N LV K A + A Q + V + + LVD Sbjct: 14 VALLGRPNVGKSSLANALVGVKIAAVSPKAQTTRQVVRGIVQTPEAQI-------VLVDT 66 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG R G ++R + E + +L+ + +D+ + ++ + Sbjct: 67 PGVHEPR------HELGRFMIRQIREALEEVVGICFLVEATDQRLSSLDRRILEWIREAK 120 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVL 202 +V+ K+D L + E L K L Y A+P E+IP S+ + ++VL Sbjct: 121 RPTALVVNKVDLLK---SPEALWKVVAL---YQDAYPFEEIIPLSATRGSNLDVL 169 >gi|332883522|gb|EGK03805.1| GTP-binding protein engA [Dysgonomonas mossii DSM 22836] Length = 468 Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 11/132 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVN-RKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR N GKSSL+N L++ +N+ +N G T+ + + D NL L Sbjct: 207 PRIAIVGRPNAGKSSLVNALMDEERNIV--TNIAGTTRD-SIYTRFDKFNLD-----FYL 258 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++++ + ++R + L+ID G++ D ++FS + K Sbjct: 259 VDTAGIRKKGKVTEDLEYYS--VIRSIKAIENSDVCVLMIDATQGIESQDMNIFSLIQKN 316 Query: 149 AVSYQIVLTKID 160 + + K D Sbjct: 317 RKGLVVCVNKWD 328 >gi|315303200|ref|ZP_07873857.1| GTP-binding protein Era [Listeria ivanovii FSL F6-596] gi|313628427|gb|EFR96903.1| GTP-binding protein Era [Listeria ivanovii FSL F6-596] Length = 301 Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ L+ + +Y +ID G + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +++ KID +SP + +E+ + L+ E+IP S+++ Sbjct: 117 PVFLLINKIDLISPEELFKLIEQYRELL-----DFEEIIPISALQ 156 >gi|307609736|emb|CBW99247.1| hypothetical protein LPW_10281 [Legionella pneumophila 130b] Length = 295 Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKS+L+N ++ +K L+ TS P T+H L +F V Sbjct: 8 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTEDEFQ--------FVYV 58 Query: 90 DMPG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D PG G A+A + ++ ++R + + L+D H K D+ V + + + Sbjct: 59 DTPGIHQGNAKAINRMMNKTAISVLR------DVDVIAFLVDGTHW-KDEDEYVLNLIKQ 111 Query: 148 KAVSYQIVLTKIDKLSPTT 166 V +V+ K+DK++ T Sbjct: 112 AKVPCILVVNKVDKITDKT 130 >gi|182418397|ref|ZP_02949691.1| GTP-binding protein Era [Clostridium butyricum 5521] gi|237666582|ref|ZP_04526567.1| GTP-binding protein Era [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377779|gb|EDT75323.1| GTP-binding protein Era [Clostridium butyricum 5521] gi|237657781|gb|EEP55336.1| GTP-binding protein Era [Clostridium butyricum E4 str. BoNT E BL5262] Length = 296 Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 23/174 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 + GR NVGKS+L+N ++ K L+ SN P T++ DF M V Sbjct: 7 VTIVGRPNVGKSTLLNYIMGEK-LSIVSNKPQTTRNNIQTILTGDDFQ--------MVFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG PK + G +V E + + V L + + + D+ + L K Sbjct: 58 DTPG---IHKPKHKL---GEFMVNSAKESTKDVDLVLFLTNPCEEIGKGDRFILETLKGK 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 VL K+D+ + +TLE + + A E++P S++K K ++ L Sbjct: 112 KCPVFFVLNKVDENTQDRVAKTLE---MFSKEFEFA--EIVPISAIKGKNVDAL 160 >gi|119964121|ref|YP_947439.1| GTP-binding protein EngA [Arthrobacter aurescens TC1] gi|254783134|sp|A1R5C7|DER_ARTAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|119950980|gb|ABM09891.1| putative GTP-binding protein Era [Arthrobacter aurescens TC1] Length = 491 Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 23/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L+N ++ R+ A + PG T+ + + N +N LV Sbjct: 54 PVLAIIGRPNVGKSTLVNRILGRRE-AVVEDTPGVTRDRVMYSAR--WNGRN----FTLV 106 Query: 90 DMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G+ + A+ V + V V ++D G D+ V L K Sbjct: 107 DTGGWEHDAKGIHARVAEQAEMAVELAD------AVLFVVDSAVGATATDEGVMKMLRKS 160 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D + TL + E P S++ +G+ L +++ Sbjct: 161 KKPVIMVANKVDDFAQEADSATL---------WGLGFGEPYPVSALHGRGVADLLDHVMD 211 Query: 209 TI 210 T+ Sbjct: 212 TL 213 >gi|54293917|ref|YP_126332.1| GTP-binding protein Era [Legionella pneumophila str. Lens] gi|53753749|emb|CAH15207.1| hypothetical protein lpl0973 [Legionella pneumophila str. Lens] Length = 311 Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKS+L+N ++ +K L+ TS P T+H L +F V Sbjct: 24 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTEDEFQ--------FVYV 74 Query: 90 DMPG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D PG G A+A + ++ ++R + + L+D H K D+ V + + + Sbjct: 75 DTPGIHQGNAKAINRMMNKTAISVLR------DVDVIAFLVDGTHW-KDEDEYVLNLIKQ 127 Query: 148 KAVSYQIVLTKIDKLSPTT 166 V +V+ K+DK++ T Sbjct: 128 AKVPCILVVNKVDKITDKT 146 >gi|16800567|ref|NP_470835.1| GTP-binding protein Era [Listeria innocua Clip11262] gi|21263591|sp|Q92BP8|ERA_LISIN RecName: Full=GTPase Era gi|16413972|emb|CAC96730.1| lin1499 [Listeria innocua Clip11262] gi|313618893|gb|EFR90758.1| GTP-binding protein Era [Listeria innocua FSL S4-378] gi|313623743|gb|EFR93885.1| GTP-binding protein Era [Listeria innocua FSL J1-023] Length = 301 Score = 42.0 bits (97), Expect = 0.060, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ L+ + +Y +ID G + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +++ KID +SP + +E+ + L+ E+IP S+++ Sbjct: 117 PVFLLINKIDLISPEDLIKLIEQYRELM-----DFEEIIPISALE 156 >gi|325981901|ref|YP_004294303.1| ribosome-associated GTPase EngA [Nitrosomonas sp. AL212] gi|325531420|gb|ADZ26141.1| ribosome-associated GTPase EngA [Nitrosomonas sp. AL212] Length = 464 Score = 42.0 bits (97), Expect = 0.062, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 9/153 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A + L PE+ + P+IA GR NVGKS+LIN L+ + + + PG T+ + Sbjct: 156 ADLALADFPEVVEESASKHPKIAIVGRPNVGKSTLINTLLGEERVI-AFDQPGTTRD-SI 213 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 +V DF++ L+D G + ++ + ++ L V L++D Sbjct: 214 YV--DFTHKDKQ---YTLIDTAGLRRRGQVHETIEKFSA--IKTLQAIEDANVVVLILDA 266 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 R+ + D + F+ + + I + K D L Sbjct: 267 RNEISDQDAHIAGFILETGRALVIAINKWDGLD 299 >gi|148360408|ref|YP_001251615.1| GTP-binding protein Era [Legionella pneumophila str. Corby] gi|148282181|gb|ABQ56269.1| GTP-binding protein Era [Legionella pneumophila str. Corby] Length = 311 Score = 42.0 bits (97), Expect = 0.062, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKS+L+N ++ +K L+ TS P T+H L +F V Sbjct: 24 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTEDEFQ--------FVYV 74 Query: 90 DMPG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D PG G A+A + ++ ++R + + L+D H K D+ V + + + Sbjct: 75 DTPGIHQGNAKAINRMMNKTAISVLR------DVDVIAFLVDGTHW-KDEDEYVLNLIKQ 127 Query: 148 KAVSYQIVLTKIDKLSPTT 166 V +V+ K+DK++ T Sbjct: 128 AKVPCILVVNKVDKITDKT 146 >gi|260893107|ref|YP_003239204.1| small GTP-binding protein [Ammonifex degensii KC4] gi|260865248|gb|ACX52354.1| small GTP-binding protein [Ammonifex degensii KC4] Length = 425 Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 28/187 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR N GKSSLIN L ++ +A S+ PG T V K L L Sbjct: 7 PRGQRLHIALFGRRNAGKSSLINALTGQE-VAIVSDVPGTTTD---PVAKAMEILP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDV 141 + ++D G +V G L V+ E R+ L L+ID G +++V Sbjct: 61 PVMIIDTAGI-------DDVGELGALRVKKSFEVLNRTDL--ALLVIDPGRGFGPYEEEV 111 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ V V+ KID L P + L A P+V S++ R+GIE Sbjct: 112 LKRCEEYKVPVVTVINKID-LYPEVVRNGL--------GVELASPKVF-VSALTRQGIEE 161 Query: 202 LRKAILE 208 L++ I++ Sbjct: 162 LKQVIIQ 168 >gi|254785338|ref|YP_003072767.1| GTP-binding protein Era [Teredinibacter turnerae T7901] gi|237686443|gb|ACR13707.1| GTP-binding protein Era [Teredinibacter turnerae T7901] Length = 296 Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 28/181 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ +K LA TS P T++ N K +++ M VD Sbjct: 9 IAIVGRPNVGKSTLLNHLIEQK-LAITSRKPQTTRN-NMLGIKTVGDVQ-----MIFVDT 61 Query: 92 PGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI----DQDVFSFL 145 PG G+ +A I RY+++ ++ + + K I D+ V L Sbjct: 62 PGIHKGHGKA-----------INRYMNKSASSAIKDVDVVVFVVDKNIWTDEDEWVLEQL 110 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K+D+L + L K L P A E++P S+++ + +E L + Sbjct: 111 QRCESPIIVAVNKVDQLDDKSV--LLPHLKQLETALPKA--ELVPVSALRHQNLERLEQL 166 Query: 206 I 206 + Sbjct: 167 V 167 >gi|116872893|ref|YP_849674.1| GTP-binding protein Era [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461073|sp|A0AIR3|ERA_LISW6 RecName: Full=GTPase Era gi|116741771|emb|CAK20895.1| GTP-binding protein Era [Listeria welshimeri serovar 6b str. SLCC5334] Length = 301 Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ L+ + +Y +ID G + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +++ KID +SP + +E+ + L+ E+IP S+++ Sbjct: 117 PVFLLINKIDLISPEDLFKLIEQYRELL-----DFEEIIPISALQ 156 >gi|297517162|ref|ZP_06935548.1| GTP-binding protein EngA [Escherichia coli OP50] Length = 194 Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 11/142 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKS+L N ++ + + + PG T+ + ++P ++ + L+D G Sbjct: 1 GRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MERDGREYVLIDTAG-- 51 Query: 96 YARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 R K D+ +++ L V L+ID R G+ D + F+ S I Sbjct: 52 -VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVI 110 Query: 155 VLTKIDKLSPTTAQETLEKTKY 176 V+ K D LS ++ E + Sbjct: 111 VVNKWDGLSQEVKEQVRETLDF 132 >gi|303248222|ref|ZP_07334485.1| ribosome-associated GTPase EngA [Desulfovibrio fructosovorans JJ] gi|302490360|gb|EFL50271.1| ribosome-associated GTPase EngA [Desulfovibrio fructosovorans JJ] Length = 443 Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 22/180 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+AG +A GR N GKSSL+N L+ ++ L S+ G T+ D + +KN Sbjct: 177 PEAGI-RLAVLGRPNAGKSSLVNELLGQERLI-VSDVAGTTRD-----AVDVALVKNGR- 228 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 VD G +K GL + + L ++ID GV D+ Sbjct: 229 RYVFVDTAGV------RKRTRITDGLERYSVGKALGSAKRANVAVVVIDATGGVGVQDKR 282 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPTSSVKRKGI 199 + S+LDK+ + I + KID L P L K + +R H V+ S+ +RKGI Sbjct: 283 LISYLDKERTPFLIAVNKID-LVPQKDMIALRKDIQDELRM--CGHVPVLYISAAQRKGI 339 >gi|167569736|ref|ZP_02362610.1| GTP-binding protein EngA [Burkholderia oklahomensis C6786] Length = 445 Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKRYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSP 164 + + + K D L P Sbjct: 292 ALVVGVNKWDGLDP 305 >gi|323698496|ref|ZP_08110408.1| GTP-binding proten HflX [Desulfovibrio sp. ND132] gi|323458428|gb|EGB14293.1| GTP-binding proten HflX [Desulfovibrio desulfuricans ND132] Length = 557 Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 33/194 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP- 84 KAG P ++ G +N GKS+L+N L + + LA F D ++ + P Sbjct: 385 KAGLPVVSLVGYTNAGKSTLLNTLTSSRVLAED----------KLFATLDPTSRRIRFPE 434 Query: 85 --AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH-GVKQIDQDV 141 + L D G+ R P +++ L E + + L+ D H V++ + V Sbjct: 435 EREVVLTDTVGF-IRRLPPDLKEAFRA----TLEELDSADLLVLVCDASHPEVEEQVEAV 489 Query: 142 FSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + LD+ +S +VL K DKL E+ + +RN +PE IP +V R Sbjct: 490 RAILDEMELSSIPSILVLNKWDKLD--------EEGRAAMRNV---YPEGIPAVAVDRPT 538 Query: 199 IEVLRKAILETINY 212 +E + +AIL + + Sbjct: 539 LEPVVQAILANLPW 552 >gi|218282475|ref|ZP_03488734.1| hypothetical protein EUBIFOR_01316 [Eubacterium biforme DSM 3989] gi|218216571|gb|EEC90109.1| hypothetical protein EUBIFOR_01316 [Eubacterium biforme DSM 3989] Length = 435 Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 14/189 (7%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 I L +PE L P G GR NVGKSSL+N ++ +++ SN G T+ Sbjct: 158 IVLEKLPEKNLSPYEGITSFCVIGRPNVGKSSLVNSIL-KEDRVIVSNVEGTTRDA-IDT 215 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 P + ++D G +N++ + I+R LS V LID Sbjct: 216 PFHVDD-----KEYMIIDTAGIRKKGKIYENIEKYS--ILRALSAIDRSNVVLFLIDGEK 268 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTK---IDKLSPTTAQETLE-KTKYLIRNY-PTAHPE 187 G++ D+ V IV K ++K T A+ E + ++L NY P A Sbjct: 269 GIRDQDKHVAGLAHDAGKGVIIVYNKWDTVEKDEKTMAKIEKEIRAQFLYLNYAPIAFTS 328 Query: 188 VIPTSSVKR 196 + S V + Sbjct: 329 ALTGSKVNQ 337 >gi|119357805|ref|YP_912449.1| GTP-binding protein EngA [Chlorobium phaeobacteroides DSM 266] gi|166224325|sp|A1BHZ8|DER_CHLPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|119355154|gb|ABL66025.1| small GTP-binding protein [Chlorobium phaeobacteroides DSM 266] Length = 437 Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 16/156 (10%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V E L+ K P +A GR NVGKSS +N L+ L S+ PG T+ + F+ Sbjct: 166 VQEKQLVEKDLPTNLAVVGRPNVGKSSFVNALLGANRLI-VSDIPGTTRDA---IDSRFT 221 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVK 135 K + L+D G ++ + L ++++ RC ++ID R G++ Sbjct: 222 RKKQDF---VLIDTAGLRKRTKIDAGIEYYSSL----RTDKAIERCDVALVMIDARTGIE 274 Query: 136 QIDQDVFSFLDKKAVSYQIVLTK---IDKLSPTTAQ 168 D + + ++ +++ K ++K S T+A Sbjct: 275 NQDMKIINMAVERKRGVLLLINKWDLVEKDSKTSAH 310 >gi|261337358|ref|ZP_05965242.1| GTP-binding protein Era [Bifidobacterium gallicum DSM 20093] gi|270277736|gb|EFA23590.1| GTP-binding protein Era [Bifidobacterium gallicum DSM 20093] Length = 337 Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 33/191 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ + +A S+ P T+ + L N M LVD Sbjct: 32 VAVVGRPNVGKSTLINALLGTQ-IAIASSRPETTRKAIRGI------LTTNDAQMVLVDT 84 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFL---- 145 PG R + G + + + S C + L+ + D+ + S L Sbjct: 85 PGIHRPR-------TLLGQRLNDIVDESLADCDAIAFLLPADQEIGPGDKRILSRLRAEF 137 Query: 146 ----DKKAVSYQI----VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + S+++ VLTKID+L T K + N +++P S++K Sbjct: 138 AHKRDDGSFSWKVPLIGVLTKIDELDRGTL-----INKLIEINEFADFTDIVPVSALKDD 192 Query: 198 GIEVLRKAILE 208 IE +R ++E Sbjct: 193 NIEEVRNVLIE 203 >gi|56459917|ref|YP_155198.1| GTPase Era [Idiomarina loihiensis L2TR] gi|56178927|gb|AAV81649.1| GTPase Era [Idiomarina loihiensis L2TR] Length = 305 Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 24/179 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ +K ++ TSN P T+H V D + A+ VD Sbjct: 16 VAIVGRPNVGKSTLINRLLGQK-ISITSNKPQTTRHRILGVDTD-----DGCQAI-YVDT 68 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQIDQD--VFSFLDK 147 PG + + P+ I R +++ S L+ V L++ +K ++ D V + + Sbjct: 69 PGM-HKQEPRA--------INRVMNQTASSALKDVDLVLFVVENLKWLEDDKMVLEKIQR 119 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V +++ K+D+L + L ++L N ++P S+ ++ LRK + Sbjct: 120 SKVPVVLLVNKVDQLKD--KERLLPHLQWL--NEQHKFDAILPISATHGDNVDELRKIV 174 >gi|29654548|ref|NP_820240.1| GTP-binding protein EngA [Coxiella burnetii RSA 493] gi|153208833|ref|ZP_01947057.1| GTP-binding protein EngA [Coxiella burnetii 'MSU Goat Q177'] gi|154706295|ref|YP_001424682.1| GTP-binding protein EngA [Coxiella burnetii Dugway 5J108-111] gi|161830868|ref|YP_001597096.1| GTP-binding protein EngA [Coxiella burnetii RSA 331] gi|165921454|ref|ZP_02219642.1| GTP-binding protein EngA [Coxiella burnetii RSA 334] gi|212218660|ref|YP_002305447.1| GTP-binding protein EngA [Coxiella burnetii CbuK_Q154] gi|41017032|sp|Q83C83|DER_COXBU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189037144|sp|A9KFU3|DER_COXBN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189037145|sp|A9NDV6|DER_COXBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238058971|sp|B6J7Q3|DER_COXB1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|29541815|gb|AAO90754.1| GTP-binding protein [Coxiella burnetii RSA 493] gi|120575684|gb|EAX32308.1| GTP-binding protein EngA [Coxiella burnetii 'MSU Goat Q177'] gi|154355581|gb|ABS77043.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111] gi|161762735|gb|ABX78377.1| GTP-binding protein EngA [Coxiella burnetii RSA 331] gi|165916769|gb|EDR35373.1| GTP-binding protein EngA [Coxiella burnetii RSA 334] gi|212012922|gb|ACJ20302.1| GTP-binding protein [Coxiella burnetii CbuK_Q154] Length = 443 Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 20/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ PG V +D + + + L+ Sbjct: 3 PVIAIVGRPNVGKSTLFNYL-TKSRAALVADVPG--------VTRDRQYGETTIDSQRLL 53 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 + G K V V + S C+ L+D + G+ D+ + L KK Sbjct: 54 LVDTGGLVDTENKEVAPLAETQVEQAIDESD--CILFLVDAKAGLVPADEIIAERLRKKG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K D+ Q K + P VI +S +G++ L +LE Sbjct: 112 KKIFLAVNKADRARAAVVQSDFYKLGF-------GEPYVIAAAS--GRGVKDLMTQVLEN 162 Query: 210 I 210 + Sbjct: 163 L 163 Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 9/133 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN L+ + + + PG T+ + ++P N L+D Sbjct: 177 KIAMIGRPNVGKSTLINRLLGEERVI-VYDQPGTTRD-SIYIP-----FARNDENYTLID 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + +++ L V L+D R GV + D + + + + V Sbjct: 230 TAGIRRRAKIQDYVEKFS--MIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGV 287 Query: 151 SYQIVLTKIDKLS 163 S I + K D L+ Sbjct: 288 SLIIAVNKWDGLN 300 >gi|299530502|ref|ZP_07043922.1| GTP-binding protein EngA [Comamonas testosteroni S44] gi|298721478|gb|EFI62415.1| GTP-binding protein EngA [Comamonas testosteroni S44] Length = 446 Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 15/183 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A +GR N GKS+LIN + + L + PG T+ VP + N L Sbjct: 180 PVRLAVAGRPNAGKSTLINTWLGEERLV-AFDMPGTTRD-AITVP-----FERNGQKFEL 232 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L V LLID GV D + ++ + Sbjct: 233 IDTAGLRRKGKVFEAIEKFS--VVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILES 290 Query: 149 AVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S + + K D + Q E +T+ + H S+ KR+G+E L K+I Sbjct: 291 GRSVVLGINKWDAVDDYQRQMLERSIETRLSFLKFAPLH----FISAQKRQGLEPLWKSI 346 Query: 207 LET 209 ++ Sbjct: 347 IQA 349 >gi|77919006|ref|YP_356821.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380] gi|77545089|gb|ABA88651.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380] Length = 303 Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 35/186 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N ++ +K +A TSN P T++ L + D L + Sbjct: 16 VAIIGRPNVGKSTLLNSVLGQK-IAITSNKPQTTRNRILGIYNQPDAQVL--------FL 66 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFSF 144 D PG A+ G++ RY+ +++ C V +L++ + D V Sbjct: 67 DTPGVHKAK----------GMLNRYMVDQALSTCGDVDVVLMLVEANDRLGGGDDYVLEQ 116 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEK--TKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + V +V+ K+D + +E KY A E+IP S++ +G E L Sbjct: 117 VSRSNVPVILVINKVDLIHRPELLPLIEAYTGKY-------AFSEIIPVSALTGEGTEQL 169 Query: 203 RKAILE 208 ++++ Sbjct: 170 VSSLVK 175 >gi|254519865|ref|ZP_05131921.1| GTP-binding protein Era [Clostridium sp. 7_2_43FAA] gi|226913614|gb|EEH98815.1| GTP-binding protein Era [Clostridium sp. 7_2_43FAA] Length = 296 Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 + GR NVGKS+L+N ++ K L+ SN P T++ KD + V Sbjct: 7 VTIVGRPNVGKSTLLNHIMGEK-LSIVSNKPQTTRNNIQTILTGKDHQ--------LVFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG PK + + ++ + V LI+ + + D+ + L + Sbjct: 58 DTPGI---HKPKHKLGEY--MVNSAKDSIKEVDLVLFLINPEEEIGRGDKFIIETLKNQK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KID+ + +TL+ + + E+IP S+++ K ++ L + ++ET Sbjct: 113 APVFLVVNKIDEFTQERVAKTLQ-----MYSSELEFKEIIPISALRGKNVDKLVELMIET 167 Query: 210 I 210 + Sbjct: 168 M 168 >gi|307132056|ref|YP_003884072.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Dickeya dadantii 3937] gi|306529585|gb|ADM99515.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Dickeya dadantii 3937] Length = 495 Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 11/145 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + L Sbjct: 207 PIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRD-SIYIP-----MERDGRDYVL 259 Query: 89 VDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G R K D+ +++ L V L+ID R G+ D + F+ Sbjct: 260 IDTAG---VRKRGKITDAVEKFSVIKTLQAIEDANVVLLVIDAREGISDQDLSLLGFILN 316 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLE 172 S IV+ K D L+ + E Sbjct: 317 SGRSLVIVVNKWDGLTQEIKDQVKE 341 >gi|303240051|ref|ZP_07326572.1| tRNA modification GTPase TrmE [Acetivibrio cellulolyticus CD2] gi|302592320|gb|EFL62047.1| tRNA modification GTPase TrmE [Acetivibrio cellulolyticus CD2] Length = 460 Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 12/108 (11%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L K+ A ++ PG T+ + +D+ NL N +P + ++D G Sbjct: 229 GRPNVGKSSLLNELTG-KSRAIVTDIPGTTRD----IIEDYINL-NGVP-VRIIDTAGI- 280 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 R + V+ G + + E + + ++ID GV Q D D+ + Sbjct: 281 --RETEDVVEKIG--VEKTHKEVDSADLIIMMIDADQGVNQEDIDILN 324 >gi|264679419|ref|YP_003279326.1| small GTP-binding protein [Comamonas testosteroni CNB-2] gi|262209932|gb|ACY34030.1| small GTP-binding protein [Comamonas testosteroni CNB-2] Length = 446 Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 15/183 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A +GR N GKS+LIN + + L + PG T+ VP + N L Sbjct: 180 PVRLAVAGRPNAGKSTLINTWLGEERLV-AFDMPGTTRDA-ITVP-----FERNGQKFEL 232 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L V LLID GV D + ++ + Sbjct: 233 IDTAGLRRKGKVFEAIEKFS--VVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYILES 290 Query: 149 AVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S + + K D + Q E +T+ + H S+ KR+G+E L K+I Sbjct: 291 GRSVVLGINKWDAVDDYQRQMLERSIETRLSFLKFAPLH----FISAQKRQGLEPLWKSI 346 Query: 207 LET 209 ++ Sbjct: 347 IQA 349 >gi|150016018|ref|YP_001308272.1| GTP-binding protein EngA [Clostridium beijerinckii NCIMB 8052] gi|189037141|sp|A6LSI6|DER_CLOB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|149902483|gb|ABR33316.1| small GTP-binding protein [Clostridium beijerinckii NCIMB 8052] Length = 438 Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 11/144 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSLIN L+ + + S+ PG T+ S+L+ LVD Sbjct: 179 IAMIGKPNVGKSSLINKLLGEERVI-VSDIPGTTRD------SIDSHLETEEGKFILVDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + + ER+ + C+ L+ID G+ + D+ + + + + Sbjct: 232 AGLRRKSKVKEEIERYSVIRTYAAIERADV-CI-LMIDATEGITEQDEKIIGYAHELRKA 289 Query: 152 YQIVLTKIDKLSPTTAQETLEKTK 175 +++ K D + +TL+K K Sbjct: 290 IMVIVNKWDLVEKD--DKTLDKFK 311 Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 21/140 (15%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L ++ ++ + PG T+ V + L+ N Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-ISIVQDTPGVTRDR---VYAEAEWLRYNF---T 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVF 142 ++D G P+ N +I++ + ++ T + ++D + G+ D +V Sbjct: 55 MIDTGGI----EPENN-----DIIIKQMRRQANIAIETADVIIFIVDGKEGLTAADNEVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKL 162 + L K +V+ K+D L Sbjct: 106 TMLRKSKKPVVLVVNKVDNL 125 >gi|319941433|ref|ZP_08015761.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein Era [Sutterella wadsworthensis 3_1_45B] gi|319805053|gb|EFW01883.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein Era [Sutterella wadsworthensis 3_1_45B] Length = 360 Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust. Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 32/204 (15%) Query: 14 FLRGVPEIGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 F R + + G L A PE +A GR NVGKS+LIN +V K ++ TS P T++ Sbjct: 45 FERMLAQAGALSSAKVPEGFRCGYVAVVGRPNVGKSTLINAIVGEK-VSITSKKPQTTRN 103 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL--SERSTLR--- 122 V L + VD PG+ + KN + R + S RSTL Sbjct: 104 RVLGV------LTTDQAQFIFVDTPGF---QTKVKN------QLTRRMNRSVRSTLSEVD 148 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 V ++I+ +G K D +V L +A + + ++K D A L +R YP Sbjct: 149 AVVMVIES-NGWKPGDLEVLRLLPTEASNVILAVSKTDLSKDRNA--LLPLMADSMRRYP 205 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAI 206 A ++P S+ K + ++ L + I Sbjct: 206 FAA--IVPVSAEKHRQLDDLLREI 227 >gi|167562554|ref|ZP_02355470.1| GTP-binding protein EngA [Burkholderia oklahomensis EO147] Length = 445 Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKRYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSP 164 + + + K D L P Sbjct: 292 ALVVGVNKWDGLDP 305 >gi|154249512|ref|YP_001410337.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1] gi|154153448|gb|ABS60680.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1] Length = 266 Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 11/118 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G NVGKS++IN ++ R + A+T + PG T+ + + ++ + ++ Sbjct: 109 PHLAVVGVPNVGKSTIINKIIGR-HRAKTGSQPGITRGVQWV----------SIDGIVVL 157 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D PG Y+ K + + LI E + + V +ID+D ++FL++ Sbjct: 158 DSPGILYSEIYSKEIAAKLLLIGSIPVENLNDEIYEIAFNIYKNVAEIDKDFYTFLEE 215 >gi|255764471|ref|YP_003064835.2| GTP-binding protein EngA [Candidatus Liberibacter asiaticus str. psy62] gi|254547822|gb|ACT56895.2| GTP-binding protein EngA [Candidatus Liberibacter asiaticus str. psy62] Length = 470 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 21/134 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G NVGKS+L N LV +K +A N PG T+ + + N +VD Sbjct: 5 IAIVGAPNVGKSTLFNRLVKKK-MAVVGNHPGITRD------RLYGQAIINGVIFNIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSFLD 146 G A KN I + +++++ L + LID + G+ D + SFL Sbjct: 58 AGI----ADGKNCS-----IAKQMNDQTELAINEAHLILFLIDSKAGITPYDHAITSFLR 108 Query: 147 KKAVSYQIVLTKID 160 KK + IV K+D Sbjct: 109 KKNIPIIIVSNKMD 122 >gi|253581093|ref|ZP_04858353.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847629|gb|EES75599.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 474 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 26/172 (15%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ N GKSSL+N+L+ +N A ++ G T+ + +++ L ++ ++D G Sbjct: 244 GKPNAGKSSLLNLLIG-ENRAIVTDIAGTTRD----ILEEYITLHG--ISLKIIDTAGI- 295 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R K V+ G R +++++ L + ++D + + D+++ L KKA+ I Sbjct: 296 --RETKDIVEKIGVDRAREMAQKADL--ILYVVDSSVPLDENDEEIMEMLTGKKAI---I 348 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D L P E L++ T HP VIP S+ + KGI L + I Sbjct: 349 LYNKTD-LQPEIQPEILKE--------KTGHP-VIPISAKEEKGITELEEQI 390 >gi|186476174|ref|YP_001857644.1| GTP-binding protein EngA [Burkholderia phymatum STM815] gi|238691310|sp|B2JIU7|DER_BURP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|184192633|gb|ACC70598.1| small GTP-binding protein [Burkholderia phymatum STM815] Length = 446 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V DF L+D Sbjct: 182 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV--DFERQGKK---YTLID 234 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 235 TAGLRKRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 292 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 293 ALVVGVNKWDGLDPHVRERT 312 >gi|307823640|ref|ZP_07653869.1| GTP-binding protein Era [Methylobacter tundripaludum SV96] gi|307735625|gb|EFO06473.1| GTP-binding protein Era [Methylobacter tundripaludum SV96] Length = 293 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 24/180 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H + N A + M Sbjct: 6 VALIGRPNVGKSTLMNHLLKQK-ISITSRKPQTTRHRILGI--------NTTDAGQAIYM 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVK--QIDQDVFSFLDK 147 G + K+ ++ RYL + +TL V +++ G+ + D+ +F L++ Sbjct: 57 DTPGMHNSEKRALN-------RYLNRTAETTLLGVDVIVWLIDGLSWHEYDEVIFKKLEQ 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K+DK++ A T +P H ++P S++KR ++ L I+ Sbjct: 110 AGLPVILAVNKVDKVADKEAILTFFNDAQ--HRFPFKH--LVPISALKRTNLDQLEDLIM 165 >gi|282890013|ref|ZP_06298547.1| hypothetical protein pah_c009o032 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500105|gb|EFB42390.1| hypothetical protein pah_c009o032 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 493 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 13/143 (9%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 EIG P IA GR NVGKSSLIN L++ + S PG T+ D S Sbjct: 173 EIGEEETDKPLAIAIIGRPNVGKSSLINYLLDEQRCI-VSPIPGTTRD-----SVDVS-F 225 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQI 137 +N A L+D G + + VD + + +ER+ R L++D + G+ Sbjct: 226 THNEHAYTLIDTAGIRRKHSEHEVVDKFAAI----RTERAIARADICLLVLDSQQGITVQ 281 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 ++ + + +++ ++ K D Sbjct: 282 EKRIANLIEEAGKGCILLFNKWD 304 >gi|228911324|ref|ZP_04075128.1| tRNA modification GTPase mnmE [Bacillus thuringiensis IBL 200] gi|228848342|gb|EEM93192.1| tRNA modification GTPase mnmE [Bacillus thuringiensis IBL 200] Length = 458 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFHAIQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D L E + K A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTD-LPQAIDMERVTKL--------AAGNRVITTSLIEEQGIDELEKAI 374 >gi|125973539|ref|YP_001037449.1| small GTP-binding protein [Clostridium thermocellum ATCC 27405] gi|256003357|ref|ZP_05428348.1| small GTP-binding protein [Clostridium thermocellum DSM 2360] gi|281417743|ref|ZP_06248763.1| ribosome-associated GTPase EngA [Clostridium thermocellum JW20] gi|166224331|sp|A3DE77|DER_CLOTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|125713764|gb|ABN52256.1| small GTP-binding protein [Clostridium thermocellum ATCC 27405] gi|255992647|gb|EEU02738.1| small GTP-binding protein [Clostridium thermocellum DSM 2360] gi|281409145|gb|EFB39403.1| ribosome-associated GTPase EngA [Clostridium thermocellum JW20] gi|316940220|gb|ADU74254.1| ribosome-associated GTPase EngA [Clostridium thermocellum DSM 1313] Length = 440 Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 13/144 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 ++A G+ NVGKSSLIN ++ + + S+ PG T+ ++ FV +N + Sbjct: 179 KVAVVGKPNVGKSSLINRILGEERVI-VSDIPGTTRDAIDTFV-------ENEHGKFVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + ++ + I+R + +LID + GV + D + + ++ Sbjct: 231 DTAGIRRQSKINEKIEKYS--IIRSWTAIERADVCLILIDAKEGVTEQDTKIAGYAHEQG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEK 173 + IV+ K D + T TLE+ Sbjct: 289 KASIIVVNKWDLIEKQTG--TLEE 310 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 24/149 (16%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +PK P +A GR NVGKS+ N LV K ++ + PG T+ + ++ N K Sbjct: 1 MPK---PVVAVVGRPNVGKSTFFNYLVG-KRISIVEDTPGVTRD-RIYAEVEWRNKK--- 52 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQID 138 L+D G K I++ + ++ T + ++D + GV D Sbjct: 53 --FTLIDTGGIEPYSEDK---------IMQQMKRQAEIAIETADIIIFMVDVKDGVTASD 101 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTA 167 ++V + L K + + K+DK+ A Sbjct: 102 KEVATLLRKTKKPVIVAVNKVDKIGELPA 130 >gi|290968707|ref|ZP_06560245.1| ribosome-associated GTPase EngA [Megasphaera genomosp. type_1 str. 28L] gi|290781360|gb|EFD93950.1| ribosome-associated GTPase EngA [Megasphaera genomosp. type_1 str. 28L] Length = 443 Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 24/175 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAM--- 86 IA GR NVGKSS+ N L+ ++ + SN PG T+ ++ D S + + M Sbjct: 180 IALVGRPNVGKSSMTNALLGQERVI-VSNVPGTTRDSIDTYWTYNDTSFVLIDTAGMRRK 238 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 A VD+P Y+ +VR L L++D + GV + D+ + ++ Sbjct: 239 AKVDIPVERYS-------------VVRALRAVDRSDVAVLVLDAQDGVTEQDKKIAGYIH 285 Query: 147 KKAVSYQIVLTK---IDKLSPTTA--QETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + IV+ K IDK S T+ +E + + ++ P + V R Sbjct: 286 EAGKGCIIVVNKWDLIDKDSKTSQAFEEDIRRELAFLQYAPILFASALTKQRVNR 340 >gi|226951499|ref|ZP_03821963.1| GTP-binding protein, 16S rRNA-binding, ribosome-associated GTPase [Acinetobacter sp. ATCC 27244] gi|226837792|gb|EEH70175.1| GTP-binding protein, 16S rRNA-binding, ribosome-associated GTPase [Acinetobacter sp. ATCC 27244] Length = 341 Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + A+ VD Sbjct: 41 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRH-------KIVGIDSREKSQAVFVD 92 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK--QIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L++ K Q D+ V L Sbjct: 93 TPGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVVDAQKWTQNDELVLEKLKNA 145 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K+D L + + + N+ E++P S+++ +E LR I + Sbjct: 146 DMPVILVINKLDTFENKNEALPLIQERAKLMNF----AEIVPVSALRGANLEHLRDTIEK 201 Query: 209 TINY 212 + Y Sbjct: 202 YLPY 205 >gi|167041019|ref|YP_001664004.1| tRNA modification GTPase TrmE [Thermoanaerobacter sp. X514] gi|205829185|sp|B0K5N4|MNME_THEPX RecName: Full=tRNA modification GTPase mnmE gi|166855259|gb|ABY93668.1| tRNA modification GTPase TrmE [Thermoanaerobacter sp. X514] Length = 460 Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 226 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 279 GI---RDTDELVEKIG--VTKSKEVLAEADLILFVLDASRELTKEDYEIFDILTGKNIIF 333 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E + TK I +I S+V++ G+E L I Sbjct: 334 --VLNKIDLPKKIDEKELKDLTKDGI---------IIEVSTVEKIGLEELENTI 376 >gi|298384325|ref|ZP_06993885.1| tRNA modification GTPase TrmE [Bacteroides sp. 1_1_14] gi|298262604|gb|EFI05468.1| tRNA modification GTPase TrmE [Bacteroides sp. 1_1_14] Length = 465 Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 88/190 (46%), Gaps = 22/190 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTINIS 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG---VKQI 137 +D G R ++S G I R + V ++D +KQ+ Sbjct: 267 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDSSDASSQIKQL 319 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + + ++K + +V K D + ++ E+ L++N+P + + I S+ +RK Sbjct: 320 SEKIIPRCEEKQLI--VVFNKADLIE----EKQKEELSALLKNFPKEYTKSIFISAKERK 373 Query: 198 GIEVLRKAIL 207 + L+K ++ Sbjct: 374 QTDELQKMLI 383 >gi|294651021|ref|ZP_06728361.1| GTP-binding protein era family protein [Acinetobacter haemolyticus ATCC 19194] gi|292823122|gb|EFF81985.1| GTP-binding protein era family protein [Acinetobacter haemolyticus ATCC 19194] Length = 341 Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + A+ VD Sbjct: 41 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRH-------KIVGIDSREKSQAVFVD 92 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK--QIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L++ K Q D+ V L Sbjct: 93 TPGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVVDAQKWTQNDELVLEKLKNA 145 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K+D L + + + N+ E++P S+++ +E LR I + Sbjct: 146 DMPVILVINKLDTFENKNEALPLIQERAKLMNF----AEIVPVSALRGANLEHLRDTIEK 201 Query: 209 TINY 212 + Y Sbjct: 202 YLPY 205 >gi|300913770|ref|ZP_07131087.1| tRNA modification GTPase TrmE [Thermoanaerobacter sp. X561] gi|307725544|ref|YP_003905295.1| tRNA modification GTPase TrmE [Thermoanaerobacter sp. X513] gi|300890455|gb|EFK85600.1| tRNA modification GTPase TrmE [Thermoanaerobacter sp. X561] gi|307582605|gb|ADN56004.1| tRNA modification GTPase TrmE [Thermoanaerobacter sp. X513] Length = 462 Score = 41.6 bits (96), Expect = 0.071, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 228 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 280 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 281 GI---RDTDELVEKIG--VTKSKEVLAEADLILFVLDASRELTKEDYEIFDILTGKNIIF 335 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E + TK I +I S+V++ G+E L I Sbjct: 336 --VLNKIDLPKKIDEKELKDLTKDGI---------IIEVSTVEKIGLEELENTI 378 >gi|260775207|ref|ZP_05884105.1| GTP-binding protein Era [Vibrio coralliilyticus ATCC BAA-450] gi|260608908|gb|EEX35070.1| GTP-binding protein Era [Vibrio coralliilyticus ATCC BAA-450] Length = 324 Score = 41.6 bits (96), Expect = 0.072, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H V + + + A+ VD Sbjct: 33 VAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGV-----DTEGDYQAI-YVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H K D+ V + L K Sbjct: 86 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTKD-DEMVLTKLQKSNF 139 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D + ++ +K + +V+P S+ + K I+VLRK + E Sbjct: 140 PVVLCVNKVDNVQDRNDVMLHMMDMSKKM------EFVDVVPISAKQGKNIDVLRKHVRE 193 Query: 209 TI 210 + Sbjct: 194 HL 195 >gi|323451733|gb|EGB07609.1| hypothetical protein AURANDRAFT_27328 [Aureococcus anophagefferens] Length = 389 Score = 41.6 bits (96), Expect = 0.073, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 5/72 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G++P+A +A G NVGKS+LIN L RK A++ N G T+ LN+ K + K Sbjct: 165 GIMPRAA--RVAVIGYPNVGKSALINKLAGRK-AAKSENKAGVTRSLNWVRSKPSTQGK- 220 Query: 82 NLPAMALVDMPG 93 LP L+D PG Sbjct: 221 GLP-FELLDSPG 231 >gi|309389060|gb|ADO76940.1| ribosome-associated GTPase EngA [Halanaerobium praevalens DSM 2228] Length = 438 Score = 41.6 bits (96), Expect = 0.073, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 13/138 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 IA G+ NVGKSSL+N L+ +K + S+ PG T+ KD S + Sbjct: 180 IAVIGKPNVGKSSLVNHLIGKKRVI-VSDMPGTTRDAVDTMIKWKDIS--------FNFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++V+ + L R L V ++ID + GV D+ + + + Sbjct: 231 DTAGLRRKSRVKEDVEYYSNL--RALRSVDRADAVLMMIDAQEGVTDQDKKIAGYAHDEG 288 Query: 150 VSYQIVLTKIDKLSPTTA 167 + I + K D + + Sbjct: 289 KAMVIAINKWDLMEKDSG 306 >gi|291520563|emb|CBK75784.1| GTP-binding protein Era [Butyrivibrio fibrisolvens 16/4] Length = 302 Score = 41.6 bits (96), Expect = 0.073, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ +K +A TSN P T++ V D N+ + +D Sbjct: 9 VTIVGRPNVGKSTLMNHIIGQK-IAITSNKPQTTRNRIQTVYTD-----ENVGQIVFLDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG A+ + G ++ + +ST+ V L LI+ V D+ + L Sbjct: 63 PGMHQAK------NKLGEYMMS--AAKSTINDVDLILWLIEPDTKVGAGDKKIAELLATA 114 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ KID ET++ K L EV+P S++ +G + L I + Sbjct: 115 EAPVILVINKIDMADGAKVGETIQAFKDLCD-----FIEVVPVSALHGEGCDDLLATIFK 169 >gi|119716729|ref|YP_923694.1| GTP-binding protein EngA [Nocardioides sp. JS614] gi|119537390|gb|ABL82007.1| small GTP-binding protein [Nocardioides sp. JS614] Length = 461 Score = 41.6 bits (96), Expect = 0.073, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 27/199 (13%) Query: 17 GVPEIGL--LPKA-GP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 G PE +P+A GP P +A GR NVGKS+L+N ++ R+ A + PG T+ + Sbjct: 10 GAPETAAETVPEAAGPVPVLAVVGRPNVGKSTLVNRIIGRRE-AVVEDVPGVTRDRVSY- 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYG-YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + N A +VD G+ AR + + + V S V ++D Sbjct: 68 -----DASWNGRAFTVVDTGGWDPDARGLAERIAGQAEVAV------SLADAVLFVVDAT 116 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G+ D+ V L K A + K+D + E Y + N P + Sbjct: 117 VGITDADEAVVRILRKSAKPVVLAANKVD-------DQRTEAEAYGLWNLGLGEPYAV-- 167 Query: 192 SSVKRKGIEVLRKAILETI 210 S++ +G L A+L + Sbjct: 168 SALHGRGSGDLLDAVLAAL 186 >gi|282860196|ref|ZP_06269270.1| ribosome-associated GTPase EngA [Prevotella bivia JCVIHMP010] gi|282587017|gb|EFB92248.1| ribosome-associated GTPase EngA [Prevotella bivia JCVIHMP010] Length = 437 Score = 41.6 bits (96), Expect = 0.074, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 25/195 (12%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVP 73 PE GL + P A GR N GKSSLIN + +A T+ T++ F Sbjct: 167 PEEGL--EEDIPRFAVVGRPNAGKSSLINAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF- 223 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 DF LVD G ++++ + ++R + L+ID G Sbjct: 224 -DF----------YLVDTAGIRRKNKVSEDLEFYS--VMRSIRSIENSDVCILMIDATRG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIP 190 ++ D ++F + + S +V+ K D L P Q+ ++ IRN P + Sbjct: 271 IEAQDMNIFQLIQRNNKSLVVVVNKWD-LVPDKDQKVIDTFTNAIRNRMAPFVDFPIIFA 329 Query: 191 TSSVKRKGIEVLRKA 205 ++ K++ +VL A Sbjct: 330 SALTKQRIFKVLETA 344 >gi|118369583|ref|XP_001017995.1| hypothetical protein TTHERM_01046810 [Tetrahymena thermophila] gi|89299762|gb|EAR97750.1| hypothetical protein TTHERM_01046810 [Tetrahymena thermophila SB210] Length = 1232 Score = 41.6 bits (96), Expect = 0.074, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 16/137 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNL-ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 I G S VGKSSLI L K L ++N+ R + P ++N++ N +D Sbjct: 319 IIIIGESQVGKSSLIEQLTEYKGLVGDSTNSKSRFCEI---FPVIYNNVRYN-----FID 370 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL-----IDCRHGVKQIDQDVFSFL 145 PGYG + D++ LI +L L L IDCR QI + F+ Sbjct: 371 TPGYGGTESRSSYFDNF-KLIADFLRRNKILEFKILFVRNADIDCRENSGQIIKQFVLFI 429 Query: 146 DKKAVSYQIVLTKIDKL 162 ++ +I L DKL Sbjct: 430 -QELFDQEITLVDSDKL 445 >gi|325180045|emb|CCA14447.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1957 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 26/38 (68%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 ++L+D R G+ +DQ+ FL++ YQI+LTKID + Sbjct: 18 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAV 55 >gi|299148912|ref|ZP_07041974.1| tRNA modification GTPase TrmE [Bacteroides sp. 3_1_23] gi|298513673|gb|EFI37560.1| tRNA modification GTPase TrmE [Bacteroides sp. 3_1_23] Length = 465 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 28/194 (14%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTVNIG 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V ++D + QI+Q Sbjct: 267 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDAVNAASQIEQ- 318 Query: 141 VFSFLDKKAV------SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 L +K + +V K D + + L L++++P E I S+ Sbjct: 319 ----LSEKIIPRCEGKHLIVVFNKTDLIEDKQKENVLS----LLKDFPKESTESIFISAK 370 Query: 195 KRKGIEVLRKAILE 208 +RK L+K +++ Sbjct: 371 QRKNTSELQKMLID 384 >gi|320117061|ref|YP_004187220.1| tRNA modification GTPase TrmE [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319930152|gb|ADV80837.1| tRNA modification GTPase TrmE [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 462 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 228 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 280 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 281 GI---RDTDELVEKIG--VTKSKEVLAEADLILFVLDASRELTKEDYEIFDILTGKNIIF 335 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E + TK I +I S+V++ G+E L I Sbjct: 336 --VLNKIDLPKKIDEKELKDLTKDGI---------IIEVSTVEKIGLEELENTI 378 >gi|188590271|ref|YP_001920268.1| GTP-binding protein Era [Clostridium botulinum E3 str. Alaska E43] gi|251778596|ref|ZP_04821516.1| GTP-binding protein Era [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|226741197|sp|B2V2K0|ERA_CLOBA RecName: Full=GTPase Era gi|188500552|gb|ACD53688.1| GTP-binding protein Era [Clostridium botulinum E3 str. Alaska E43] gi|243082911|gb|EES48801.1| GTP-binding protein Era [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 295 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 + GR NVGKS+L+N ++ K L+ SN P T++ D+ + V Sbjct: 7 VTIVGRPNVGKSTLLNYIMGEK-LSIVSNKPQTTRNNIQTILTGDDYQ--------IVFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG PK + + ++ + + V L + + + D+ + L K Sbjct: 58 DTPG---IHKPKHKLGEY--MVNSAKDSTNDVDLVLFLTNPDEEIGKGDKFILESLKDKK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +VL KID+ +P ++LE + + E++P +++K K ++ L Sbjct: 113 CPVYLVLNKIDESTPERVAKSLE-----MYSSEFNFKEIVPIAAIKGKNVDTL 160 >gi|52082648|ref|YP_081439.1| tRNA modification GTPase TrmE [Bacillus licheniformis ATCC 14580] gi|52788047|ref|YP_093876.1| tRNA modification GTPase TrmE [Bacillus licheniformis ATCC 14580] gi|319648514|ref|ZP_08002730.1| tRNA modification GTPase mnmE [Bacillus sp. BT1B_CT2] gi|81384063|sp|Q65CN1|MNME_BACLD RecName: Full=tRNA modification GTPase mnmE gi|52005859|gb|AAU25801.1| ThdF protein - tRNA modification [Bacillus licheniformis ATCC 14580] gi|52350549|gb|AAU43183.1| ThdF [Bacillus licheniformis ATCC 14580] gi|317389593|gb|EFV70404.1| tRNA modification GTPase mnmE [Bacillus sp. BT1B_CT2] Length = 459 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 228 GRPNVGKSSLLNSLVHETK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L + L+++ + D+D+ F K + ++ Sbjct: 280 --RETEDIVERIGVERSRQVLKEADL--ILLVLNYSESLS--DEDIKLFEATKGMDIIVI 333 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D + L++ + L N P V+ TS +K +GI+ L +AI Sbjct: 334 VNKTD----LEQKLDLDRVRELAGNQP-----VVTTSLLKEEGIDELEEAI 375 >gi|325180041|emb|CCA14443.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1994 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 26/38 (68%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 ++L+D R G+ +DQ+ FL++ YQI+LTKID + Sbjct: 36 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAV 73 >gi|300868767|ref|ZP_07113378.1| tRNA modification GTPase mnmE [Oscillatoria sp. PCC 6506] gi|300333328|emb|CBN58570.1| tRNA modification GTPase mnmE [Oscillatoria sp. PCC 6506] Length = 464 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 228 VAIVGRPNVGKSSLLNAW-SRCDRAIVTDLPGTTRDV-----VESQLVVGGIP-IQVLDT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + V+ G R +E + L V L ID G + D++++ + + V Sbjct: 281 AGI---RETEDRVEKIGVARSRQAAESADL--VLLAIDAAAGWTEGDREIYQQVKHRPVI 335 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +++ K+D +S ++ LE + I N P A + ++ +GIE L +AIL +N Sbjct: 336 --LIVNKVDLVS----EKDLEILQSKIEN-PQAK---VLAAAAYNQGIEDLEQAILTAVN 385 >gi|256827122|ref|YP_003151081.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Cryptobacterium curtum DSM 15641] gi|256583265|gb|ACU94399.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Cryptobacterium curtum DSM 15641] Length = 444 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 11/141 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 +A GR N GKSSL N+L +R + + S+ G T+ ++ V + A LVD Sbjct: 184 VAIIGRPNAGKSSLTNML-SRNDRSIVSDVAGTTRDAIDTLVAHEGR-------AYRLVD 235 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++V+ +G VR + V L++D G+ DQ + F ++ Sbjct: 236 TAGLRRKSKIDEDVEYYG--FVRSMRAIDRADVVLLMVDGTLGLTDQDQRIAGFAHERGC 293 Query: 151 SYQIVLTKIDKLSPTTAQETL 171 + IVL K D + +E + Sbjct: 294 AMVIVLNKWDIVEGADRKEAV 314 >gi|210621260|ref|ZP_03292566.1| hypothetical protein CLOHIR_00509 [Clostridium hiranonis DSM 13275] gi|210154871|gb|EEA85877.1| hypothetical protein CLOHIR_00509 [Clostridium hiranonis DSM 13275] Length = 412 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 29/194 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+A I GR N GKSSLIN + + N++ S+ G T P S + + Sbjct: 8 PRAERLHIGIYGRRNNGKSSLINAITGQ-NISLVSDFAGTTTD-----PVYKSMELHGIG 61 Query: 85 AMALVDMPGY------GYARAPKKNVDSWG--GLIVRYLSERSTL---RCVYLLIDCRHG 133 + +D G+ G R ++ +D+ + + LS+ + L ++ +D Sbjct: 62 PVVFIDTAGFDDEGELGQMRV-ERTLDAVNKTDIAIVVLSDENILIKEEKMFKGLDI--- 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +I+++ S L K V Y +V+ KIDK+S ++ E ++ P I TS+ Sbjct: 118 --EIEKEWISNLKKAKVPYLVVINKIDKISDLNLEKATENISDELKIKP------ILTSA 169 Query: 194 VKRKGIEVLRKAIL 207 V +KG+ ++R+ ++ Sbjct: 170 VDKKGVALIREELI 183 >gi|325180043|emb|CCA14445.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1964 Score = 41.6 bits (96), Expect = 0.076, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 26/38 (68%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 ++L+D R G+ +DQ+ FL++ YQI+LTKID + Sbjct: 36 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAV 73 >gi|325180053|emb|CCA14455.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1943 Score = 41.6 bits (96), Expect = 0.076, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 26/38 (68%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 ++L+D R G+ +DQ+ FL++ YQI+LTKID + Sbjct: 18 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAV 55 >gi|325180049|emb|CCA14451.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1935 Score = 41.6 bits (96), Expect = 0.076, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 26/38 (68%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 ++L+D R G+ +DQ+ FL++ YQI+LTKID + Sbjct: 18 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAV 55 >gi|39935764|ref|NP_948040.1| GTP-binding protein Era [Rhodopseudomonas palustris CGA009] gi|39649617|emb|CAE28139.1| possible GTP-binding protein Era [Rhodopseudomonas palustris CGA009] Length = 308 Score = 41.6 bits (96), Expect = 0.076, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V + S + LVD Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIESGSQI-------ILVDT 70 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG APK+ +D +W G + + + CV L+D R G+ + +D+ + L Sbjct: 71 PGI---FAPKRRLDRAMVKTAWSG------AHDADIVCV--LLDARAGINEQAEDILANL 119 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR--NYPTAHPEVIPTSSVKRKGIEVLR 203 +VL KID ++ EK L + N A + S++ G++ LR Sbjct: 120 ANVDRPKLLVLNKIDLIAR-------EKLLALAQAANQRLAFDQTFMVSALTGDGVDDLR 172 Query: 204 KAI 206 KA+ Sbjct: 173 KAL 175 >gi|325180046|emb|CCA14448.1| APS kinase/ATP sulfurlyase/pyrophosphatase fusion protein putative [Albugo laibachii Nc14] Length = 1954 Score = 41.6 bits (96), Expect = 0.077, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 26/38 (68%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 ++L+D R G+ +DQ+ FL++ YQI+LTKID + Sbjct: 18 FVLLDARRGITTLDQEFLDFLEEMESFYQIILTKIDAV 55 >gi|297618522|ref|YP_003703681.1| tRNA modification GTPase TrmE [Syntrophothermus lipocalidus DSM 12680] gi|297146359|gb|ADI03116.1| tRNA modification GTPase TrmE [Syntrophothermus lipocalidus DSM 12680] Length = 460 Score = 41.6 bits (96), Expect = 0.077, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 34/185 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + +G+ NVGKSSL+N L+ RK A ++ PG T+ + +D+ N+K +P + ++D Sbjct: 224 VVIAGKPNVGKSSLLNALL-RKKKAIVTDIPGTTRD----IVEDYINVK-GIP-VNIMDT 276 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-----STLRCVYLLIDCRHGVKQIDQDVFSFLD 146 G + G L+ R ER S + ++D G+ + D+ V Sbjct: 277 AG----------IRETGDLVERIGVERSEEVISEADIILAVLDAGAGISEEDERV----- 321 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK-GIEVLRKA 205 K V+ + V+ ++K + TLE+ + L +P + + SVK + G+E L A Sbjct: 322 AKMVAGRRVIVLVNKEDLEEKRVTLEEVERL---FP---GQTVVRGSVKEEIGLEELESA 375 Query: 206 ILETI 210 I E + Sbjct: 376 IEEAV 380 >gi|322383675|ref|ZP_08057426.1| Era-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151887|gb|EFX44830.1| Era-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 300 Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 21/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ K + +D Sbjct: 12 VALIGRPNVGKSTLMNQVIGQK-IAIMSDKPQTTRN------KIHGVYTTEHAQIVFLDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P+ + + + S + + + L+D G+ D+ + L Sbjct: 65 PGI---HKPQSKLGDYMMKVAH--STLAEVDAILFLVDVAEGIGGGDRFIIEQLKSVQTP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 +VL KIDK+ P E +I Y +P E++P S+++ + + + I Sbjct: 120 VILVLNKIDKVHP-------EDLLPVISTYKELYPFTEIVPVSALQGNNVTTMLEQI 169 >gi|256751460|ref|ZP_05492338.1| tRNA modification GTPase TrmE [Thermoanaerobacter ethanolicus CCSD1] gi|256749679|gb|EEU62705.1| tRNA modification GTPase TrmE [Thermoanaerobacter ethanolicus CCSD1] Length = 462 Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 228 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 280 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 281 GI---RDTDELVEKIG--VTKSKEVLAEADLILFVLDASRELTKEDYEIFDILTGKNIIF 335 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E + TK I +I S+V++ G+E L I Sbjct: 336 --VLNKIDLPKKIDEKELKDLTKDGI---------IIEVSTVEKIGLEELENTI 378 >gi|192291351|ref|YP_001991956.1| GTP-binding protein Era [Rhodopseudomonas palustris TIE-1] gi|192285100|gb|ACF01481.1| GTP-binding protein Era [Rhodopseudomonas palustris TIE-1] Length = 307 Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 33/183 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V + S + LVD Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIESGSQI-------ILVDT 69 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG APK+ +D +W G + + + CV L+D R G+ + +D+ + L Sbjct: 70 PGI---FAPKRRLDRAMVKTAWSG------AHDADIVCV--LLDARAGINEQAEDILANL 118 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR--NYPTAHPEVIPTSSVKRKGIEVLR 203 +VL KID ++ EK L + N A + S++ G++ LR Sbjct: 119 ANVDRPKLLVLNKIDLIAR-------EKLLALAQAANQRLAFDQTFMVSALTGDGVDDLR 171 Query: 204 KAI 206 KA+ Sbjct: 172 KAL 174 >gi|167038669|ref|YP_001666247.1| tRNA modification GTPase TrmE [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|205829184|sp|B0K8H9|MNME_THEP3 RecName: Full=tRNA modification GTPase mnmE gi|166857503|gb|ABY95911.1| tRNA modification GTPase TrmE [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 460 Score = 41.6 bits (96), Expect = 0.078, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 226 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 279 GI---RDTDELVEKIG--VTKSKEVLAEADLILFVLDASRELTKEDYEIFDILTGKNIIF 333 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E + TK I +I S+V++ G+E L I Sbjct: 334 --VLNKIDLPKKIDEKELKDLTKDGI---------IIEVSTVEKIGLEELENTI 376 >gi|220931895|ref|YP_002508803.1| small GTP-binding protein [Halothermothrix orenii H 168] gi|254783157|sp|B8CWY9|DER_HALOH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219993205|gb|ACL69808.1| small GTP-binding protein [Halothermothrix orenii H 168] Length = 438 Score = 41.6 bits (96), Expect = 0.079, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 20/163 (12%) Query: 21 IGLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFV 72 + +LP+ GP + +A G+ NVGKSSL+N +V ++ + S+ PG T+ ++ V Sbjct: 162 VNMLPEKGPEDSDDDAIDVAIIGKPNVGKSSLVNYIVGQERVI-VSDIPGTTRDAIDTLV 220 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K N L+D G K+ + + L +RS V ++ID Sbjct: 221 EK-------NGHRYNLIDTAGLRKKSRVKEATEYYSALRTIKAIDRSD--GVIMMIDALE 271 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 GV + D+ + + + + + + K D + T T+E K Sbjct: 272 GVTEQDKKIAGYAHEAGKAIVLAVNKWDLVEKDT--HTMENYK 312 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 17/136 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + ++ P T+ + ++++ + +V Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGYR-ISIVEGEPNVTRD------RIYADVNWLDRSFIIV 56 Query: 90 DMPGYG-YARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLD 146 D G Y R KN +V+Y ++ + + ++D R+G+ D++V +FL Sbjct: 57 DTGGIDPYDRDQIKN-------MVKYQAQMAIDEASLILFVVDGRNGLTATDEEVAAFLR 109 Query: 147 KKAVSYQIVLTKIDKL 162 K +V+ K+D Sbjct: 110 KSNKKVILVVNKVDDF 125 >gi|304403961|ref|ZP_07385623.1| GTP-binding protein Era [Paenibacillus curdlanolyticus YK9] gi|304346939|gb|EFM12771.1| GTP-binding protein Era [Paenibacillus curdlanolyticus YK9] Length = 306 Score = 41.6 bits (96), Expect = 0.080, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 20/173 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 +A GR NVGKS+L+N ++ +K +A S+ P T++ ++ KD + +D Sbjct: 17 VAIVGRPNVGKSTLMNHIIGQK-IAIMSDKPQTTRNKIHGVYTKDDKQI-------VFLD 68 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK-KA 149 PG P+ + ++ ++ ++ + LID G+ D+ + L K Sbjct: 69 TPGI---HKPQSKLGNF--MVKSAVNALDEVEAALFLIDVSEGIGGGDRFIIEQLKNVKN 123 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ KIDK+ P + + + K L Y A E+IP S+++ +E L Sbjct: 124 TPVFLVMNKIDKVKPEELLKIITQYKDL---YDFA--EIIPISALQGNNVETL 171 >gi|262038602|ref|ZP_06011971.1| selenocysteine-specific translation elongation factor [Leptotrichia goodfellowii F0264] gi|261747471|gb|EEY34941.1| selenocysteine-specific translation elongation factor [Leptotrichia goodfellowii F0264] Length = 625 Score = 41.6 bits (96), Expect = 0.080, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 18/123 (14%) Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV---KQIDQDVFS 143 +VD+PG+ I L+ S + V LL+D R G+ + D+ S Sbjct: 57 GVVDVPGHEK-------------FIKNMLAGVSGINLVLLLVDSREGIMPQTKEHADILS 103 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + +Y IV+TKID + E+ + I+ P +I SV +KGI+ L Sbjct: 104 LLGVE--NYIIVMTKIDLAEKEYREMVKEEIESYIKGTPLEGSPIIEVDSVSKKGIDTLL 161 Query: 204 KAI 206 K I Sbjct: 162 KEI 164 >gi|293370767|ref|ZP_06617313.1| tRNA modification GTPase TrmE [Bacteroides ovatus SD CMC 3f] gi|292634127|gb|EFF52670.1| tRNA modification GTPase TrmE [Bacteroides ovatus SD CMC 3f] Length = 473 Score = 41.6 bits (96), Expect = 0.081, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 28/194 (14%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 221 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTVNIG 274 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V ++D + QI+Q Sbjct: 275 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDAVNAASQIEQ- 326 Query: 141 VFSFLDKKAV------SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 L +K + +V K D + + L L++++P E I S+ Sbjct: 327 ----LSEKIIPRCEGKHLIVVFNKADLIEDKQKENVLS----LLKDFPKESTESIFISAK 378 Query: 195 KRKGIEVLRKAILE 208 +RK L+K +++ Sbjct: 379 QRKNTSELQKMLID 392 >gi|166712110|ref|ZP_02243317.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzicola BLS256] Length = 465 Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ A + PG T+ ++ V + L P + +V Sbjct: 3 PLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRHYGVCR----LDEQQPFI-VV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + R + + L V ++D R G +D ++ ++L K A Sbjct: 57 DTGGIA---GDEDGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKLA 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ KID T + + + V+ S+ R+GI+ L Sbjct: 112 RQTVLVINKIDGTDEETVRSEFARYGFC---------NVVALSAAHRQGIDEL 155 >gi|71909809|ref|YP_287396.1| tRNA modification GTPase TrmE [Dechloromonas aromatica RCB] gi|123626188|sp|Q477Q5|MNME_DECAR RecName: Full=tRNA modification GTPase mnmE gi|71849430|gb|AAZ48926.1| tRNA modification GTPase trmE [Dechloromonas aromatica RCB] Length = 448 Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 25/181 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + +G+ NVGKSSL+N L +LA + G T+ S ++ + ++D Sbjct: 217 VVLAGQPNVGKSSLLNRLAG-DDLAIVTPIAGTTRD------ALRSTIQIEGIPLHIIDT 269 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G I R E V LL+D R GV + D+++ + L Sbjct: 270 AGL---RETDDEVEKIG--IERSWKEIERSDVVLLLVDARTGVSESDREILARLP----- 319 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 D+L T ++ T + A+ I S+ +GIE+LR+ +L Sbjct: 320 --------DRLQRITVYNKIDLTHRAAERHDEANGTAISLSAKANQGIELLRQELLRIAG 371 Query: 212 Y 212 + Sbjct: 372 W 372 >gi|15838838|ref|NP_299526.1| GTP-binding protein Era [Xylella fastidiosa 9a5c] gi|13959361|sp|Q9PB97|ERA_XYLFA RecName: Full=GTPase Era gi|9107401|gb|AAF85046.1|AE004037_7 GTP binding protein [Xylella fastidiosa 9a5c] Length = 298 Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 30/183 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 IA GR NVGKS+L N LV K ++ SN P T+H + P + LV Sbjct: 12 IAVIGRPNVGKSTLTNALVGTK-ISIVSNRPQTTRHRLLGIA--------TFPEGQIVLV 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV---YLLIDCRHGVKQIDQDVFSFLD 146 D PG + N L+ R + R +L V L+ + H ++ D ++ L+ Sbjct: 63 DTPGLHREQKHPMN-----RLMNR--TARGSLEDVDAALLVTESTHWNEE-DTLAYNLLN 114 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRK 204 + +V+ KID+ +A L ++ N + T HP S++KRKG+E L Sbjct: 115 DTGIPVVLVINKIDRFKDKSA--LLPFLTHINENHTFTTIHP----VSALKRKGLETLVS 168 Query: 205 AIL 207 +L Sbjct: 169 DLL 171 >gi|161723167|ref|YP_442759.2| GTP-binding protein EngA [Burkholderia thailandensis E264] gi|167581710|ref|ZP_02374584.1| GTP-binding protein EngA [Burkholderia thailandensis TXDOH] gi|167619826|ref|ZP_02388457.1| GTP-binding protein EngA [Burkholderia thailandensis Bt4] gi|257138969|ref|ZP_05587231.1| GTP-binding protein EngA [Burkholderia thailandensis E264] Length = 445 Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKQYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 292 ALVVGVNKWDGLDPHVRERT 311 >gi|93005486|ref|YP_579923.1| GTP-binding protein EngA [Psychrobacter cryohalolentis K5] gi|122415786|sp|Q1QD14|DER_PSYCK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|92393164|gb|ABE74439.1| Small GTP-binding protein domain [Psychrobacter cryohalolentis K5] Length = 480 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 19/145 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + A ++ G T+ + + + A +V Sbjct: 5 PVVALIGRPNVGKSTLFNQFTKSRQ-ALVADLSGLTRD------RQYGDATYEDKAFIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G G A + ++D Y+SE+S + ++D R G+ D ++ F Sbjct: 58 DTGGIGEADDGRGDIDD-------YMSEQSYTAIHEADIIVFVVDARAGMIGADAEIGKF 110 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQE 169 L +V K+D + + E Sbjct: 111 LHTLGKPVYVVANKVDGVHDSAPAE 135 >gi|295402127|ref|ZP_06812086.1| tRNA modification GTPase TrmE [Geobacillus thermoglucosidasius C56-YS93] gi|294975810|gb|EFG51429.1| tRNA modification GTPase TrmE [Geobacillus thermoglucosidasius C56-YS93] Length = 461 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ +N A ++ PG T+ V +++ N++ +P + L+D G Sbjct: 230 GRPNVGKSSLLNALVH-ENKAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLIDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L + L+++ + D+ +F + K + + ++ Sbjct: 282 --RETEDIVERIGVERSRQMLKEADL--ILLVLNYHEPLTAEDEKLFDMV--KGMDFIVI 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D +++ K L P +I TS + KGIE L AI Sbjct: 336 VNKTD----LPQHIDMDRVKQLAGGRP-----IITTSLLHEKGIEDLETAI 377 >gi|229072949|ref|ZP_04206145.1| tRNA modification GTPase mnmE [Bacillus cereus F65185] gi|228710195|gb|EEL62173.1| tRNA modification GTPase mnmE [Bacillus cereus F65185] Length = 458 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P +E+ L A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDL--PQAID--MERVTEL-----AAGNRVITTSLIEEQGIDELEKAI 374 >gi|153852706|ref|ZP_01994143.1| hypothetical protein DORLON_00125 [Dorea longicatena DSM 13814] gi|149754348|gb|EDM64279.1| hypothetical protein DORLON_00125 [Dorea longicatena DSM 13814] Length = 410 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 48/165 (29%), Positives = 67/165 (40%), Gaps = 21/165 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + I GR N GKSSLIN L +NLA S+ G T F K L L Sbjct: 7 PSSERIHIGIFGRRNAGKSSLINALTG-QNLAIVSDVRGTTTDPVF---KSMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + ++D PG +D G L I + + L+ID G+ D Sbjct: 61 PIVMIDTPG----------LDDEGELGKLRIQKAYQVLNKTDIAVLVIDGTSGITPQDNA 110 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 + + + K + +VL K D +S T QE + T +L P H Sbjct: 111 ILTRIQDKNIPLLLVLNKADLVSEHTHQEMIVST-HLKYKIPLEH 154 >gi|52841177|ref|YP_094976.1| GTP-binding protein Era [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628288|gb|AAU27029.1| GTP-binding protein Era [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 311 Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKS+L+N ++ +K L+ TS P T+H L +F V Sbjct: 24 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTEGEFQ--------FVYV 74 Query: 90 DMPG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D PG G A+A + ++ ++R + + L+D H K D+ V + + + Sbjct: 75 DTPGIHQGNAKAINRMMNKTAISVLR------DVDVIAFLVDGTHW-KDEDEYVLNLIKQ 127 Query: 148 KAVSYQIVLTKIDKLSPTT 166 V +V+ K+DK++ T Sbjct: 128 AKVPCILVVNKVDKITDKT 146 >gi|313203779|ref|YP_004042436.1| ribosome-associated GTPase enga [Paludibacter propionicigenes WB4] gi|312443095|gb|ADQ79451.1| ribosome-associated GTPase EngA [Paludibacter propionicigenes WB4] Length = 437 Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 13/180 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P A GR N GKSS+IN V + T A G T+ + F + LV Sbjct: 176 PRFAVVGRPNAGKSSIINAFVGEERTIVTDIA-GTTRDSIYTRFNKFGH------DFYLV 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + K N D +VR + L+ID G++ D ++FS + K Sbjct: 229 DTA--GIRKKAKVNEDLEYYSVVRSIRAIENCDVCILMIDATRGIESQDLNIFSLIQKNR 286 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEVLRKAI 206 + + + K D + + + ++K + IR P + +++ K++ ++VL A+ Sbjct: 287 KGFIVCVNKWDLIENKESND-IKKYEATIRERLAPFVDFPIIFTSATTKQRILKVLETAV 345 >gi|229181730|ref|ZP_04309053.1| tRNA modification GTPase mnmE [Bacillus cereus 172560W] gi|228601763|gb|EEK59261.1| tRNA modification GTPase mnmE [Bacillus cereus 172560W] Length = 458 Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--EF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P +E+ L A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDL--PQAID--MERVTEL-----AAGNRVITTSLIEEQGIDELEKAI 374 >gi|298482641|ref|ZP_07000825.1| tRNA modification GTPase TrmE [Bacteroides sp. D22] gi|298271104|gb|EFI12681.1| tRNA modification GTPase TrmE [Bacteroides sp. D22] Length = 465 Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 28/194 (14%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTVNIG 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V ++D + QI+Q Sbjct: 267 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDAVNAASQIEQ- 318 Query: 141 VFSFLDKKAV------SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 L +K + +V K D + + L L++++P E I S+ Sbjct: 319 ----LSEKIIPRCEGKHLIVVFNKADLIEDKQKENVLS----LLKDFPKESTESIFISAK 370 Query: 195 KRKGIEVLRKAILE 208 +RK L+K +++ Sbjct: 371 QRKNTSELQKMLID 384 >gi|225156498|ref|ZP_03724833.1| small GTP-binding protein [Opitutaceae bacterium TAV2] gi|224802927|gb|EEG21174.1| small GTP-binding protein [Opitutaceae bacterium TAV2] Length = 526 Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A P + F GR NVGKSSL N L+ L SN PG T+ +P F ++ Sbjct: 197 ADPLCVCFIGRPNVGKSSLGNRLLQSDRLI-VSNVPGTTRDA-VELPFTFRGREHKEHPF 254 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D+ G A V+ + L R L V+L++D GV Q D+ + Sbjct: 255 LLIDIGGIKAATKLASPVEYFSRL--RSLDAIQRADVVFLVLDALDGVTQQDKAIAGEAV 312 Query: 147 KKAVSYQIVLTKIDKLSPTTAQ 168 K+ +V+ K D + + A+ Sbjct: 313 KERKPIIVVVNKWDLVHESFAK 334 >gi|71746988|ref|XP_822549.1| GTP-binding protein [Trypanosoma brucei TREU927] gi|122123949|sp|Q38BU9|GUF1_TRYBB RecName: Full=Translation factor GUF1 homolog, mitochondrial; AltName: Full=Elongation factor 4 homolog; Short=EF-4; AltName: Full=GTPase GUF1 homolog; AltName: Full=Ribosomal back-translocase; Flags: Precursor gi|70832217|gb|EAN77721.1| GTP-binding protein, putative [Trypanosoma brucei] Length = 768 Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 20/187 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTS-NAPGRTQHLNFFVPKDFS-NLKNNLPAMALV 89 +A + GK++L ++L+ R + + S NA T L V ++ +K+ +M L Sbjct: 115 VAVVAHVDHGKTTLSDVLLRRTGVLKGSVNAGAYTDRL--LVERERGITVKSQTCSMFL- 171 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 YG + +D+ G + +Y RS + V LL+D G++ F Sbjct: 172 ---KYGGSEFLLNLIDTPGHVDFQYEVSRSVRAAQAVLLLVDVAQGIEAQTMSHFHMALD 228 Query: 148 KAVSYQIVLTKIDK-LSPTT---AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ V TK+D L+ TT A + LE + L+R+ EV+ TS+ ++ G+E L Sbjct: 229 QGLAIIPVFTKMDCVLNDTTVDAALQQLEDSTGLLRS------EVVFTSAKEQLGVEALL 282 Query: 204 KAILETI 210 +AI+E + Sbjct: 283 QAIIERV 289 >gi|323342077|ref|ZP_08082310.1| ribosome-associated GTPase EngA [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464502|gb|EFY09695.1| ribosome-associated GTPase EngA [Erysipelothrix rhusiopathiae ATCC 19414] Length = 436 Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 21/188 (11%) Query: 24 LPKAG----PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 LP+ G E++F GR NVGKSSL+N ++N+ + SN G T+ + F Sbjct: 163 LPQDGITMYEDELSFCAIGRPNVGKSSLVNAMLNQDRVI-VSNIEGTTRDA---IDTPF- 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + N ++D G ++V+ + ++R +S V LID G++ Sbjct: 218 --RMNERDYVIIDTAGIRKRGKVYEDVEKYS--VLRAMSAIDRSDVVLFLIDGEAGIRAQ 273 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN---YPTAHPEVIPTSSV 194 D+ V F + IV K D + + +E K +IR+ Y + P ++ S++ Sbjct: 274 DKHVVGFAHEAGKPIIIVYNKWDVVD--KEETAMEDVKKVIRSEFMYLSYAP-IVFVSAL 330 Query: 195 KRKGIEVL 202 RK + L Sbjct: 331 TRKRVHTL 338 >gi|54296963|ref|YP_123332.1| GTP-binding protein Era [Legionella pneumophila str. Paris] gi|53750748|emb|CAH12155.1| hypothetical protein lpp1004 [Legionella pneumophila str. Paris] Length = 311 Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKS+L+N ++ +K L+ TS P T+H L +F V Sbjct: 24 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTEGEFQ--------FVYV 74 Query: 90 DMPG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D PG G A+A + ++ ++R + + L+D H K D+ V + + + Sbjct: 75 DTPGIHQGNAKAINRMMNKTAISVLR------DVDVIAFLVDGTHW-KDEDEYVLNLIKQ 127 Query: 148 KAVSYQIVLTKIDKLSPTT 166 V +V+ K+DK++ T Sbjct: 128 AKVPCILVVNKVDKITDKT 146 >gi|89095338|ref|ZP_01168256.1| GTP-binding protein EngA [Oceanospirillum sp. MED92] gi|89080413|gb|EAR59667.1| GTP-binding protein EngA [Oceanospirillum sp. MED92] Length = 479 Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 10/135 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + L N +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRDRKYGEGR----LANEEQDYIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ +D + + L V ++D R G+ D+ + ++L + Sbjct: 58 DTGGI---TGDEQGIDYE--MAKQSLQAVDEADVVLFIVDGRAGINPADEMIANYLRRSE 112 Query: 150 VSYQIVLTKIDKLSP 164 + +V+ K D L+P Sbjct: 113 KPFYLVVNKTDGLNP 127 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 13/135 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP--KDFSNLKNNLPAMAL 88 +IA GR NVGKS+L+N ++ + A T + ++P +D N L Sbjct: 183 KIAVVGRPNVGKSTLVNRMLGEDRVVVFDKAG--TTRDSVYIPYVRDDKNY-------TL 233 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + + IV+ L + V +ID R GV + D + SF+ Sbjct: 234 IDTAGVRRRKNITEAAEKFS--IVKTLQAVNDAHVVVFVIDAREGVTEQDMHMLSFVIDT 291 Query: 149 AVSYQIVLTKIDKLS 163 S I L K D ++ Sbjct: 292 GRSLVIALNKWDGMN 306 >gi|295087115|emb|CBK68638.1| tRNA modification GTPase trmE [Bacteroides xylanisolvens XB1A] Length = 465 Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 28/194 (14%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTVNIG 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V ++D + QI+Q Sbjct: 267 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDAVNAASQIEQ- 318 Query: 141 VFSFLDKKAV------SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 L +K + +V K D + + L L++++P E I S+ Sbjct: 319 ----LSEKIIPRCEGKHLIVVFNKADLIEDKQKENVLS----LLKDFPKESTESIFISAK 370 Query: 195 KRKGIEVLRKAILE 208 +RK L+K +++ Sbjct: 371 QRKNTSELQKMLID 384 >gi|332140453|ref|YP_004426191.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] gi|332141960|ref|YP_004427698.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] gi|238693251|sp|B4RV85|DER_ALTMD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|327550475|gb|AEA97193.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] gi|327551982|gb|AEA98700.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] Length = 481 Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ + L Sbjct: 193 PIKLAIVGKPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SVYIP-----MERDEREYIL 245 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + IV+ L V L+ID R G+ D + F+ Sbjct: 246 IDTAGVRKRKKISEAVEKFS--IVKTLQAIEEANVVLLVIDAREGITDQDLSLLGFVLNS 303 Query: 149 AVSYQIVLTKIDKLS 163 S + + K D LS Sbjct: 304 GRSLVVAVNKWDGLS 318 >gi|114568076|ref|YP_755230.1| GTPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317083|sp|Q0ATU5|MNME_SYNWW RecName: Full=tRNA modification GTPase mnmE gi|114339011|gb|ABI69859.1| tRNA modification GTPase trmE [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 459 Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 15/139 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKSSL+N L+ RK A ++ PG T+ + +D+ N++ +P + L D Sbjct: 224 VAICGKPNVGKSSLLNALL-RKEKAIVTSIPGTTRD----IIEDYINIR-GIP-VKLKDT 276 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R+ + V+ G I R S V ++D G+ Q D+ ++ ++KK Sbjct: 277 AGI---RSTEDLVERIG--IERSQEVISEADLVLFILDVGTGIDQEDRKIYEKIEKK--- 328 Query: 152 YQIVLTKIDKLSPTTAQET 170 +IVL + L E Sbjct: 329 NKIVLVNKEDLEEKNISEA 347 >gi|258511948|ref|YP_003185382.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478674|gb|ACV58993.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 298 Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A SN P T++ V ++ M +D Sbjct: 8 VALIGRPNVGKSTLLNALVGQK-VAIMSNRPQTTRNRIRGVRTTETS------QMIFIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ L + + + L++D V +Q++ L++ Sbjct: 61 PGI---HKPKHRLGEY--MVDAALKTLNEVDVIVLVVDASSPVHPTEQEIAKQLERVRTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 + L K+D L L++ I Y P E +P S+++ + +++L + I Sbjct: 116 VILALNKVDALEDRAL--VLKR----IEEYQALRPFEEYVPISALRGEQVDLLAEII 166 >gi|256851187|ref|ZP_05556576.1| GTP-binding protein Era [Lactobacillus jensenii 27-2-CHN] gi|260660611|ref|ZP_05861526.1| GTP-binding protein Era [Lactobacillus jensenii 115-3-CHN] gi|282934653|ref|ZP_06339896.1| GTP-binding protein Era [Lactobacillus jensenii 208-1] gi|297206052|ref|ZP_06923447.1| GTP-binding protein Era [Lactobacillus jensenii JV-V16] gi|256616249|gb|EEU21437.1| GTP-binding protein Era [Lactobacillus jensenii 27-2-CHN] gi|260548333|gb|EEX24308.1| GTP-binding protein Era [Lactobacillus jensenii 115-3-CHN] gi|281301228|gb|EFA93529.1| GTP-binding protein Era [Lactobacillus jensenii 208-1] gi|297149178|gb|EFH29476.1| GTP-binding protein Era [Lactobacillus jensenii JV-V16] Length = 302 Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 18/171 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K + TSN T++ + F+ NL A+ VD Sbjct: 12 VALIGRPNVGKSTLMNHLIGQK-VVITSNKSQTTRNK---ISGIFTT--ENLQAV-FVDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P+ +D + + LS + + V+ +++ V + D+ + L K V Sbjct: 65 PG---IHKPQNKLDDY--MDKASLSSLNDVDLVFFMVEPEK-VGKGDEYIADLLSKVKVP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ KID++ P + +E + L + E++P S+ +E L Sbjct: 119 IFLIINKIDQVHPDSLLPVIESYQKLGK-----FAEIVPISATNGNNMEDL 164 >gi|145589468|ref|YP_001156065.1| small GTP-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189037153|sp|A4SYD7|DER_POLSQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145047874|gb|ABP34501.1| small GTP-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 454 Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 15/162 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +IA GR NVGKS+LIN L+ + + + PG T+ VP + +N P + L Sbjct: 180 PMKIAVVGRPNVGKSTLINKLIGEERVI-AFDMPGTTRDA-IEVPFE----RNGKPYI-L 232 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + ++ + +V+ L + V L++D + + + D + F+ + Sbjct: 233 VDTAGLRRRGKVFEAIEKFS--VVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFIVEA 290 Query: 149 AVSYQIVLTKIDKLSPTTAQ----ETLEKTKYLIRNYPTAHP 186 + + + K D L + E +K ++L ++ HP Sbjct: 291 GRALVVAVNKWDGLDAYVKERARLEIAQKLRFL--DFANVHP 330 >gi|261332291|emb|CBH15285.1| GTP-binding protein, putative [Trypanosoma brucei gambiense DAL972] Length = 768 Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 20/187 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTS-NAPGRTQHLNFFVPKDFS-NLKNNLPAMALV 89 +A + GK++L ++L+ R + + S NA T L V ++ +K+ +M L Sbjct: 115 VAVVAHVDHGKTTLSDVLLRRTGVLKGSVNAGAYTDRL--LVERERGITVKSQTCSMFL- 171 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 YG + +D+ G + +Y RS + V LL+D G++ F Sbjct: 172 ---KYGGSEFLLNLIDTPGHVDFQYEVSRSVRAAQAVLLLVDVAQGIEAQTMSHFHMALD 228 Query: 148 KAVSYQIVLTKIDK-LSPTT---AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ V TK+D L+ TT A + LE + L+R+ EV+ TS+ ++ G+E L Sbjct: 229 QGLAIIPVFTKMDCVLNDTTVDAALQQLEDSTGLLRS------EVVFTSAKEQLGVEALL 282 Query: 204 KAILETI 210 +AI+E + Sbjct: 283 QAIIERV 289 >gi|225572013|ref|ZP_03780877.1| hypothetical protein RUMHYD_00307 [Blautia hydrogenotrophica DSM 10507] gi|225040546|gb|EEG50792.1| hypothetical protein RUMHYD_00307 [Blautia hydrogenotrophica DSM 10507] Length = 441 Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L +N++ + PG T+ + ++ + + ++ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAG-ENISIVKDTPGVTRD------RIYAEVTWLDKSFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P N +I+ + E++ T + L+D R G+ D V Sbjct: 57 DTGGI----EPDSN-----DIILSQMREQAQIAIDTADVIVFLVDVRQGMVDADAKVADM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + +V+ K+D E Y N P IP S+ R G+ Sbjct: 108 LRRSTKPVVLVVNKVDSF------EKFMMDVYEFYNLGIGEP--IPVSASSRLGL 154 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 17/184 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA G+ NVGKSSLIN LV + + + A ++ + +K + Sbjct: 178 PKIAVVGKPNVGKSSLINKLVGEERVIVSDIAGTTRDAID-------TKVKWQGREYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + ++R ++ V ++ID GV + D + +K Sbjct: 231 DTAGLRRKGKIKEEIERYS--VIRTVTAVERANVVVIMIDGVEGVTEQDAKIAGIAHEKG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAIL 207 I + K D + +T+ + IRN P E+I S+ + G+ + R + Sbjct: 289 KGVIIAVNKWDAVEKN--DKTIYRYTDKIRNTLAYMPYAELIFISA--KTGLRLQR--LF 342 Query: 208 ETIN 211 ETI+ Sbjct: 343 ETID 346 >gi|71065252|ref|YP_263979.1| GTP-binding protein EngA [Psychrobacter arcticus 273-4] gi|123649239|sp|Q4FTW3|DER_PSYA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71038237|gb|AAZ18545.1| putative GTP-binding protein, HSR1-related [Psychrobacter arcticus 273-4] Length = 473 Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 19/145 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + A ++ G T+ + + + A +V Sbjct: 5 PVVALIGRPNVGKSTLFNQFTKSRQ-ALVADLSGLTRD------RQYGDATYEDKAFIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G G A + ++D Y+SE+S + ++D R G+ D ++ F Sbjct: 58 DTGGIGEADDGRGDIDD-------YMSEQSYTAIHEADIIVFVVDARAGMIGADAEIGKF 110 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQE 169 L +V K+D + + E Sbjct: 111 LHTLGKPVYVVANKVDGVHDSAPAE 135 >gi|30023508|ref|NP_835139.1| tRNA modification GTPase TrmE [Bacillus cereus ATCC 14579] gi|218234443|ref|YP_002370259.1| tRNA modification GTPase TrmE [Bacillus cereus B4264] gi|228924229|ref|ZP_04087500.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228961748|ref|ZP_04123351.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar pakistani str. T13001] gi|229112897|ref|ZP_04242428.1| tRNA modification GTPase mnmE [Bacillus cereus Rock1-15] gi|229130730|ref|ZP_04259683.1| tRNA modification GTPase mnmE [Bacillus cereus BDRD-Cer4] gi|229148034|ref|ZP_04276373.1| tRNA modification GTPase mnmE [Bacillus cereus BDRD-ST24] gi|296505912|ref|YP_003667612.1| tRNA modification GTPase TrmE [Bacillus thuringiensis BMB171] gi|46577419|sp|Q814F6|MNME_BACCR RecName: Full=tRNA modification GTPase mnmE gi|29899069|gb|AAP12340.1| Thiophene and furan oxidation protein ThdF [Bacillus cereus ATCC 14579] gi|218162400|gb|ACK62392.1| tRNA modification GTPase TrmE [Bacillus cereus B4264] gi|228635459|gb|EEK91950.1| tRNA modification GTPase mnmE [Bacillus cereus BDRD-ST24] gi|228652747|gb|EEL08632.1| tRNA modification GTPase mnmE [Bacillus cereus BDRD-Cer4] gi|228670576|gb|EEL25889.1| tRNA modification GTPase mnmE [Bacillus cereus Rock1-15] gi|228797942|gb|EEM44952.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar pakistani str. T13001] gi|228835447|gb|EEM80817.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326964|gb|ADH09892.1| tRNA modification GTPase TrmE [Bacillus thuringiensis BMB171] Length = 458 Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P +E+ L A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDL--PQAID--MERVTEL-----AAGNRVITTSLIEEQGIDELEKAI 374 >gi|71028302|ref|XP_763794.1| hypothetical protein [Theileria parva strain Muguga] gi|68350748|gb|EAN31511.1| hypothetical protein TP04_0159 [Theileria parva] Length = 538 Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIA--FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 K + R V E L P EI G NVGKSSL+N L+ RK + ++ N PG T+ Sbjct: 291 KHIFRMCRRVNERRLRKGLNPREIRVILMGMPNVGKSSLVNRLLGRK-VTKSYNVPGLTK 349 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPG 93 ++N + SN N + L+D PG Sbjct: 350 NINIYKSTTKSNTIKN-KRLLLIDTPG 375 >gi|148380897|ref|YP_001255438.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 3502] gi|153932263|ref|YP_001385205.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 19397] gi|153936986|ref|YP_001388674.1| GTP-binding protein Era [Clostridium botulinum A str. Hall] gi|226741172|sp|A7FXK1|ERA_CLOB1 RecName: Full=GTPase Era gi|226741199|sp|A5I626|ERA_CLOBH RecName: Full=GTPase Era gi|148290381|emb|CAL84508.1| GTP-binding protein [Clostridium botulinum A str. ATCC 3502] gi|152928307|gb|ABS33807.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 19397] gi|152932900|gb|ABS38399.1| GTP-binding protein Era [Clostridium botulinum A str. Hall] Length = 296 Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 + GR NVGKS+L+N ++ K L+ S P T+ ++ + +D L VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTEDNYQL-------VFVD 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG PK + G +V+ SE + V LI+ + D + L + Sbjct: 59 TPG---IHKPKHKL---GEYMVKSASEAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + Sbjct: 113 VPVFLVLNKIDENPQEKVAETLKTYSELME-----FEEIIPISALKGKNIDLLKELMFKY 167 Query: 210 I 210 I Sbjct: 168 I 168 >gi|253576082|ref|ZP_04853414.1| GTP-binding protein Era [Paenibacillus sp. oral taxon 786 str. D14] gi|251844425|gb|EES72441.1| GTP-binding protein Era [Paenibacillus sp. oral taxon 786 str. D14] Length = 300 Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 21/165 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ K + + +D Sbjct: 11 VAIVGRPNVGKSTLMNHIIGQK-IAIMSDKPQTTRN------KIHGVYTSEEMQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + R K D + L E + V L+D G+ D+ + L Sbjct: 64 PGI-HKRQSKLG-DYMNTTALNTLGE---VEAVLFLVDAAEGLGGGDRFIIERLKDVRTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSV 194 +VL KID++ P E+ LI Y +P E++P S++ Sbjct: 119 VILVLNKIDRVEP-------EQLLPLIEEYSKLYPFSEIVPISAM 156 >gi|164659368|ref|XP_001730808.1| hypothetical protein MGL_1807 [Malassezia globosa CBS 7966] gi|159104706|gb|EDP43594.1| hypothetical protein MGL_1807 [Malassezia globosa CBS 7966] Length = 645 Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 11/67 (16%) Query: 13 IFLRGVPEIGL-------LPKAGPPE---IAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +FL P++ L LP G PE + F G NVGKSS IN L+ K ++ S P Sbjct: 369 LFLHCAPDLTLFRRPGTDLPNDGVPEKLTVGFVGYPNVGKSSTINALLGEKKVS-VSATP 427 Query: 63 GRTQHLN 69 G+T+H Sbjct: 428 GKTKHFQ 434 >gi|302393075|ref|YP_003828895.1| tRNA modification GTPase trmE [Acetohalobium arabaticum DSM 5501] gi|302205152|gb|ADL13830.1| tRNA modification GTPase trmE [Acetohalobium arabaticum DSM 5501] Length = 463 Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ R+N A + PG T+ V ++ N+ + +P + ++D Sbjct: 229 AIIGKPNVGKSSLLNALL-RENRAIVTEVPGTTRD----VIEEVINI-DGIP-LKIIDTA 281 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G +R+ L V L++D G+ D+ + + K Sbjct: 282 GI---REAENEVEKIGIEKSEKFLKRADL--VLLVLDAHCGITDEDRKIIGLAEGK--DT 334 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IV+ K D L P A E L++ + V+ TS+ + GI+ L + I Sbjct: 335 IIVVNKTD-LEPKLAVEELKEELDM--------EAVVETSATEGIGIKELEELI 379 >gi|187928024|ref|YP_001898511.1| GTP-binding protein Era [Ralstonia pickettii 12J] gi|241662606|ref|YP_002980966.1| GTP-binding protein Era [Ralstonia pickettii 12D] gi|187724914|gb|ACD26079.1| GTP-binding protein Era [Ralstonia pickettii 12J] gi|240864633|gb|ACS62294.1| GTP-binding protein Era [Ralstonia pickettii 12D] Length = 312 Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 26/187 (13%) Query: 25 PKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P++G PE +A GR NVGKS+L+N LV +K ++ TS T+H + Sbjct: 11 PESGVPEGFRCGMVAIVGRPNVGKSTLMNALVGQK-VSITSRKAQTTRHR-------ITG 62 Query: 79 LKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC-RHGVKQ 136 ++ A VD PG+ A N L S +++ V +++ R+G Sbjct: 63 IQTTDDAQFVFVDTPGFQTRHATALN----RSLNRAVTSTLTSVDAVLFVVEAGRYGPD- 117 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVK 195 D+ V S L ++ +++ K+D+L T E + + + + +P A E++P S+ Sbjct: 118 -DEKVLSLLPRET-PVILIVNKVDRLDAYTRAEMVAVFLQDMAQVFPFA--EIVPMSAKN 173 Query: 196 RKGIEVL 202 R I+ L Sbjct: 174 RDDIDRL 180 >gi|167836401|ref|ZP_02463284.1| GTP-binding protein EngA [Burkholderia thailandensis MSMB43] Length = 445 Score = 41.2 bits (95), Expect = 0.093, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKQYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 292 ALVVGVNKWDGLDPHVRERT 311 >gi|328955535|ref|YP_004372868.1| iron-only hydrogenase maturation protein HydF [Coriobacterium glomerans PW2] gi|328455859|gb|AEB07053.1| iron-only hydrogenase maturation protein HydF [Coriobacterium glomerans PW2] Length = 422 Score = 41.2 bits (95), Expect = 0.093, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+A I F GR N GKSSL+N V ++LA S+ PG T V K L L Sbjct: 9 PRANRVHIGFFGRRNAGKSSLVNA-VTGQDLAVVSDTPGTTTD---PVYKSMELLP--LG 62 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTL-RC--VYLLIDCRHGVKQIDQD 140 + ++D PG+ D G L +R R L +C L+ D GV D+ Sbjct: 63 PVVIIDTPGF----------DDTGELGELRVKKTRQVLNKCDIAILVYDAASGVTAADRQ 112 Query: 141 VFSFLDKKAVSYQIVLTKIDK 161 + + + + + I+ K D+ Sbjct: 113 LLELIRDRGLPHLIIANKSDR 133 >gi|206970179|ref|ZP_03231132.1| tRNA modification GTPase TrmE [Bacillus cereus AH1134] gi|228955734|ref|ZP_04117729.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229082698|ref|ZP_04215145.1| tRNA modification GTPase mnmE [Bacillus cereus Rock4-2] gi|229193735|ref|ZP_04320676.1| tRNA modification GTPase mnmE [Bacillus cereus ATCC 10876] gi|206734756|gb|EDZ51925.1| tRNA modification GTPase TrmE [Bacillus cereus AH1134] gi|228589760|gb|EEK47638.1| tRNA modification GTPase mnmE [Bacillus cereus ATCC 10876] gi|228700610|gb|EEL53149.1| tRNA modification GTPase mnmE [Bacillus cereus Rock4-2] gi|228803962|gb|EEM50586.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 458 Score = 41.2 bits (95), Expect = 0.093, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P +E+ L A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDL--PQAID--MERVTEL-----AAGNRVITTSLIEEQGIDELEKAI 374 >gi|260171369|ref|ZP_05757781.1| tRNA modification GTPase TrmE [Bacteroides sp. D2] gi|315919680|ref|ZP_07915920.1| tRNA modification GTPase TrmE [Bacteroides sp. D2] gi|313693555|gb|EFS30390.1| tRNA modification GTPase TrmE [Bacteroides sp. D2] Length = 465 Score = 41.2 bits (95), Expect = 0.094, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 16/188 (8%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTVNIG 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V ++D + QI+Q Sbjct: 267 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDAVNAASQIEQL 319 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + + IV+ L +E L L++++P E I S+ +RK Sbjct: 320 SEKIIPRCEGKHLIVVFNKADLIEDKQKENL---LSLLKDFPKESTESIFISAKQRKNTS 376 Query: 201 VLRKAILE 208 L+K +++ Sbjct: 377 ELQKMLID 384 >gi|255533659|ref|YP_003094031.1| small GTP-binding protein [Pedobacter heparinus DSM 2366] gi|255346643|gb|ACU05969.1| small GTP-binding protein [Pedobacter heparinus DSM 2366] Length = 433 Score = 41.2 bits (95), Expect = 0.095, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 15/134 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAM 86 P+I GR NVGKSSLIN L+ ++ T A G T+ H+++ F + Sbjct: 174 PKITIVGRPNVGKSSLINALMGKERNIVTPIA-GTTRDSIHIHY---NQFGH------EF 223 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D G K+N++ + ++R + V L+ID G++ D ++F + Sbjct: 224 MFIDTAGLRKKTKVKENIEFYS--VMRTIKALEEADVVILMIDAMEGLESQDVNIFHLAE 281 Query: 147 KKAVSYQIVLTKID 160 K I++ K D Sbjct: 282 KNKKGIVILVNKWD 295 >gi|218900625|ref|YP_002449036.1| tRNA modification GTPase TrmE [Bacillus cereus G9842] gi|228905428|ref|ZP_04069383.1| tRNA modification GTPase mnmE [Bacillus thuringiensis IBL 4222] gi|228968636|ref|ZP_04129619.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar sotto str. T04001] gi|218540589|gb|ACK92983.1| tRNA modification GTPase TrmE [Bacillus cereus G9842] gi|228791065|gb|EEM38683.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar sotto str. T04001] gi|228854248|gb|EEM98951.1| tRNA modification GTPase mnmE [Bacillus thuringiensis IBL 4222] Length = 458 Score = 41.2 bits (95), Expect = 0.095, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFHAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P +E+ L A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDL--PQAID--MERVTEL-----AAGNRVITTSLIEEQGIDELEKAI 374 >gi|118594978|ref|ZP_01552325.1| GTP-binding protein EngA [Methylophilales bacterium HTCC2181] gi|118440756|gb|EAV47383.1| GTP-binding protein EngA [Methylophilales bacterium HTCC2181] Length = 474 Score = 41.2 bits (95), Expect = 0.096, Method: Compositional matrix adjust. Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N L ++ A ++ PG T+ + + + LVD Sbjct: 4 VAIVGRPNVGKSSLFNRLTKSRD-ALVADLPGLTR------DRHYGKITIEDAQFILVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ PKK + + ++ L + ++D R G+ IDQ + + K Sbjct: 57 GGF----EPKKKIGIAKKMALQTLLAIDECDVILFVVDGREGLHPIDQHIADVIRKNDKE 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ K + + Q + + Y ++ SS +G+ +L++ +++ Sbjct: 113 KILLINKTEGM-----QHEIVGADF----YSLGFKNILSISSAHGEGVGLLKELLVD 160 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 9/136 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P+I GR NVGKS+L+N LV + A G T+ V DF N Sbjct: 174 GAPKITIVGRPNVGKSTLVNALVGEERFIVFDQA-GTTRDA---VSVDFD---FNGDRFV 226 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L D G + V+ + +++ L+ + + L+ID G+ D + F+ + Sbjct: 227 LTDTAGIRKKGKVFETVEKFS--VLKTLAAVESSDVIILVIDSSGGIATQDMHLIGFILE 284 Query: 148 KAVSYQIVLTKIDKLS 163 S I + K D +S Sbjct: 285 TGKSIVIAINKWDSVS 300 >gi|309781188|ref|ZP_07675925.1| GTP-binding protein Era [Ralstonia sp. 5_7_47FAA] gi|308920009|gb|EFP65669.1| GTP-binding protein Era [Ralstonia sp. 5_7_47FAA] Length = 312 Score = 41.2 bits (95), Expect = 0.097, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 26/187 (13%) Query: 25 PKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P++G PE +A GR NVGKS+L+N LV +K ++ TS T+H + Sbjct: 11 PESGVPEGFRCGMVAIVGRPNVGKSTLMNALVGQK-VSITSRKAQTTRHR-------ITG 62 Query: 79 LKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC-RHGVKQ 136 ++ A VD PG+ A N L S +++ V +++ R+G Sbjct: 63 IQTTDDAQFVFVDTPGFQTRHATALN----RSLNRAVTSTLTSVDAVLFVVEAGRYGPD- 117 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVK 195 D+ V S L ++ +++ K+D+L T E + + + + +P A E++P S+ Sbjct: 118 -DEKVLSLLPRET-PVILIVNKVDRLDAYTRAEMVAVFLQDMAQVFPFA--EIVPMSAKN 173 Query: 196 RKGIEVL 202 R I+ L Sbjct: 174 RDDIDRL 180 >gi|291519504|emb|CBK74725.1| ribosome-associated GTPase EngA [Butyrivibrio fibrisolvens 16/4] Length = 441 Score = 41.2 bits (95), Expect = 0.097, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 17/184 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA G+ NVGKSSLIN L + + S+ G T+ + ++ N + Sbjct: 178 PKIAVIGKPNVGKSSLINKLCGEERVI-VSDIAGTTRDAV------DTRVRYNHKDYIFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + IVR ++ V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKSKIKEDLERYS--IVRAVASVEKADVVIIMIDATEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 I + K D + T +E K + ++ P A I S +R G I Sbjct: 289 KGIIICVNKWDAIEKNDKTMKEHETKIRQILSFMPYASILFISVKSGQRLG------KIY 342 Query: 208 ETIN 211 ETI+ Sbjct: 343 ETID 346 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 29/184 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + ++ + PG T+ + D S L + ++ Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGER-ISIVKDTPGVTRDRIY---ADVSWLNYDF---TMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P N +I+ + E++ T + L+D + G++ D V Sbjct: 57 DTGGI----EPDTN-----DIILSQMREQAQIAIDTADVIIFLVDVKQGLQDSDSKVADM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V+ K+D A Y N P IP S+ R G + Sbjct: 108 LRRSHKPVILVVNKVDSFERDMAD------VYEFYNLGIGDP--IPVSASSRLGFGDMLD 159 Query: 205 AILE 208 ++E Sbjct: 160 KVVE 163 >gi|323704187|ref|ZP_08115766.1| GTP-binding protein Era [Thermoanaerobacterium xylanolyticum LX-11] gi|323536253|gb|EGB26025.1| GTP-binding protein Era [Thermoanaerobacterium xylanolyticum LX-11] Length = 299 Score = 41.2 bits (95), Expect = 0.098, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 21/180 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALVD 90 A GR+NVGKS+L+N L+N K +A TS+ P T++ +D+ + +D Sbjct: 9 ALIGRTNVGKSTLLNALLNEK-VAITSDKPQTTRNTIQGILTGEDYQ--------VIFID 59 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + + +I + + + +++ V D+ + L Sbjct: 60 TPG---IHKPKHKLSEF--MIESVKKTLAEVDLIIYMVEPDVEVGPGDKYIIDHLINIET 114 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID +S T +++ K L N+ +++P S++K I++L+ I+ I Sbjct: 115 PVILVINKIDTVSHETVDMSIQIFKQL-YNF----KDILPISALKNMNIDLLKHTIVSYI 169 >gi|229153643|ref|ZP_04281819.1| tRNA modification GTPase mnmE [Bacillus cereus m1550] gi|228629829|gb|EEK86482.1| tRNA modification GTPase mnmE [Bacillus cereus m1550] Length = 458 Score = 41.2 bits (95), Expect = 0.098, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDIVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P +E+ L A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDL--PQAID--MERVTEL-----AAGNRVITTSLIEEQGIDELEKAI 374 >gi|332830164|gb|EGK02792.1| GTP-binding protein engA [Dysgonomonas gadei ATCC BAA-286] Length = 437 Score = 41.2 bits (95), Expect = 0.099, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 15/180 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVN-RKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR N GKSS +N L++ +N+ +N G T+ + + D N+ L Sbjct: 176 PRIAIVGRPNAGKSSFVNALMDEERNIV--TNIAGTTRD-SIYTRFDRFNMD-----FYL 227 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++++ + ++R + L++D G++ D ++FS + K Sbjct: 228 VDTAGIRKKGKVTEDLEYYS--VIRSIKAIENSDVCVLMLDATQGIESQDLNIFSLIQKN 285 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSVKRKGIEVLRKA 205 + + K D L Q ++ ++ IR T P + ++ K++ ++VL A Sbjct: 286 RKGLVVCVNKWD-LVENKEQIVIKTFEHAIRERLAPFTDFPIIFASAVTKQRVLKVLETA 344 >gi|312890129|ref|ZP_07749672.1| ribosome-associated GTPase EngA [Mucilaginibacter paludis DSM 18603] gi|311297406|gb|EFQ74532.1| ribosome-associated GTPase EngA [Mucilaginibacter paludis DSM 18603] Length = 433 Score = 41.2 bits (95), Expect = 0.099, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 17/135 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNR-KNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPA 85 P+ +GR NVGKSS+IN L+ +N+ R H N F DF Sbjct: 174 PKYTIAGRPNVGKSSIINTLLGHDRNIVTPIAGTTRDSIHIHYNQF-GHDF--------- 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+N++ + ++R + V L+ID G++ D ++F Sbjct: 224 -MLIDTAGMRKKTKVKENIEFYS--VMRTIKAIEESDVVILMIDAVEGIEAQDVNIFHLA 280 Query: 146 DKKAVSYQIVLTKID 160 +K IV+ K D Sbjct: 281 EKNKKGIVIVVNKWD 295 Score = 34.7 bits (78), Expect = 9.1, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 17/143 (11%) Query: 32 IAFSGRSNVGKSSLINILVN-RKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMAL 88 +A GR NVGKS+L N L+ RK + + R +H ++ + DF+ + Sbjct: 5 VAIVGRPNVGKSTLFNRLIEARKAIVDDFSGVTRDRHYGVSEWTGHDFT----------V 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D GY A + + ++ + E S + ++D G+ +D ++ +FL K Sbjct: 55 IDTGGY-VANSDDVFEAAIREQVIIAIEEAS---VILFMVDVTTGITDLDDEIATFLRKS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETL 171 +V K+D S T Sbjct: 111 KKPVFVVSNKVDNNSQQVESATF 133 >gi|229051153|ref|ZP_04194697.1| tRNA modification GTPase mnmE [Bacillus cereus AH676] gi|228722216|gb|EEL73617.1| tRNA modification GTPase mnmE [Bacillus cereus AH676] Length = 458 Score = 41.2 bits (95), Expect = 0.099, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P +E+ L A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDL--PQAID--MERVTEL-----AAGNRVITTSLIEEQGIDELEKAI 374 >gi|83652896|gb|ABC36959.1| GTPase family protein [Burkholderia thailandensis E264] Length = 460 Score = 41.2 bits (95), Expect = 0.099, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 196 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKQYTLID 248 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 249 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 306 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L P + T Sbjct: 307 ALVVGVNKWDGLDPHVRERT 326 >gi|229164435|ref|ZP_04292363.1| tRNA modification GTPase mnmE [Bacillus cereus R309803] gi|228619040|gb|EEK75938.1| tRNA modification GTPase mnmE [Bacillus cereus R309803] Length = 458 Score = 41.2 bits (95), Expect = 0.100, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 23/176 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ K D P +E+ L +A VI TS ++ +GI+ L AI E Sbjct: 330 IVIVNKTDL--PQAID--MERVTEL-----SAGNRVITTSLIEEQGIDELENAIAE 376 >gi|150015731|ref|YP_001307985.1| GTP-binding protein Era [Clostridium beijerinckii NCIMB 8052] gi|189037260|sp|A6LRP9|ERA_CLOB8 RecName: Full=GTPase Era gi|149902196|gb|ABR33029.1| GTP-binding protein Era [Clostridium beijerinckii NCIMB 8052] Length = 298 Score = 41.2 bits (95), Expect = 0.100, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 23/174 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 + GR NVGKS+L+N ++ K L+ SN P T++ D+ M V Sbjct: 7 VTIVGRPNVGKSTLLNYIMGEK-LSIVSNKPQTTRNNIQTILTGDDYQ--------MIFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG PK + G +V E + + V L + + + D+ + L K Sbjct: 58 DTPG---IHKPKHKL---GEYMVNSAKESTKDVDLVLFLTNPDEEIGKGDKFILETLRDK 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +VL K+D+ + ++LE + + E++P S++K K ++VL Sbjct: 112 KCPVFLVLNKVDESTQDRVAKSLE-----MYSKEFKFAEIVPISAIKGKNVDVL 160 >gi|311087490|gb|ADP67570.1| GTP-binding protein EngA [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 453 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 15/151 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++AF GR NVGKS+LIN ++ + + TSN PG T + + +K N L+D Sbjct: 188 KVAFIGRPNVGKSTLINGILKEERMI-TSNTPGTT------LDSISTPIKYNYENYTLID 240 Query: 91 MPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G A KK ++ + I++ L + L+ID D + F+ Sbjct: 241 TAG---ASKKKKKINDFQRFSIIKTLQTIEKSNVILLIIDASLQTCHQDLSLADFIIHSG 297 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 +V+ K D + L+K K LI++ Sbjct: 298 KGIVVVVNKCDLFNSV----ELKKIKELIKS 324 Score = 35.4 bits (80), Expect = 5.1, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I GR+NVGKS+L N+L ++ A +N PG T+ + K SN K + L+ Sbjct: 3 PIIVLIGRTNVGKSTLFNVLTKTRD-ALVANYPGITRDRQYGYCKLQSNKK-----IILI 56 Query: 90 DMPG 93 D G Sbjct: 57 DTAG 60 >gi|241764499|ref|ZP_04762520.1| small GTP-binding protein [Acidovorax delafieldii 2AN] gi|241366083|gb|EER60680.1| small GTP-binding protein [Acidovorax delafieldii 2AN] Length = 462 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ G T+ + + N K ++ Sbjct: 18 PVIALVGRPNVGKSTLFNRLTKSRD-AIVADFAGLTRD------RHYGNGKQGKHEYIVI 70 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + + V ++D R GV D D+ ++L + Sbjct: 71 DTGGF----EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGVSAQDHDIANYLRRLG 126 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K E + + L Y EV P S+ +GI L LE Sbjct: 127 KPCVLVANK---------AEGMLQGGQLAEFYELGLGEVYPVSAAHGQGIRGLVDLALEP 177 Query: 210 IN 211 ++ Sbjct: 178 LH 179 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 15/184 (8%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G ++A +GR NVGKS+LIN + + L + PG T+ VP + N Sbjct: 193 GTIKLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRD-AITVP-----FERNGQRFE 245 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD G + ++ + +V+ L + V LL+D GV D + ++ + Sbjct: 246 LVDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILE 303 Query: 148 KAVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D + Q E +T+ + H S+ KR+G+ L + Sbjct: 304 SGRAVVLAVNKWDAVDEYQRQLLERSIETRLAFLKFAALH----FISAKKRQGLGPLWAS 359 Query: 206 ILET 209 I++ Sbjct: 360 IVQA 363 >gi|229099911|ref|ZP_04230834.1| tRNA modification GTPase mnmE [Bacillus cereus Rock3-29] gi|229118974|ref|ZP_04248319.1| tRNA modification GTPase mnmE [Bacillus cereus Rock1-3] gi|228664499|gb|EEL19995.1| tRNA modification GTPase mnmE [Bacillus cereus Rock1-3] gi|228683526|gb|EEL37481.1| tRNA modification GTPase mnmE [Bacillus cereus Rock3-29] Length = 458 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 23/176 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLIVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ K D P +E+ L A VI TS ++ +GI+ L +AI E Sbjct: 330 IVIVNKTD--LPQGID--MERVAEL-----AAGNRVITTSLIEEQGIDELEQAIAE 376 >gi|23011471|ref|ZP_00051819.1| COG1160: Predicted GTPases [Magnetospirillum magnetotacticum MS-1] Length = 481 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 22/147 (14%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P+A P +A GR NVGKS+L+N ++ R+ A + PG T+ + P D+S + Sbjct: 69 GAAPEAPLPVLAVVGRPNVGKSTLVNRILGRRE-AVVEDKPGVTRDRVSY-PADWSGRR- 125 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQ 136 LVD G+ VD G I ++E++ + V ++D G Sbjct: 126 ----FTLVDTGGW--------EVDVAG--IESKVAEQAEVAISLADAVLFVVDATVGATA 171 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLS 163 D+ V L + + K+D S Sbjct: 172 TDERVVRLLRESGKPVVLCANKVDGQS 198 >gi|320580694|gb|EFW94916.1| Putative GTPase [Pichia angusta DL-1] Length = 690 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 42/96 (43%), Gaps = 13/96 (13%) Query: 13 IFLRGVPEIGLLPKAGPP---EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + LR PE P G P +I G NVGKSS IN LV K ++ S+ PG+T+H Sbjct: 365 LCLRVAPEPLTEPPEGQPRRLQIGLVGYPNVGKSSTINALVGSKRVS-VSSTPGKTKHFQ 423 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVD 105 + D + L D PG + N D Sbjct: 424 TILLSD---------KVILCDCPGLVFPNFAYTNAD 450 >gi|302789061|ref|XP_002976299.1| hypothetical protein SELMODRAFT_228404 [Selaginella moellendorffii] gi|300155929|gb|EFJ22559.1| hypothetical protein SELMODRAFT_228404 [Selaginella moellendorffii] Length = 487 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN+LV K TS PG+T+H + D + L D Sbjct: 193 VGFVGYPNVGKSSTINVLVGEKRTGVTST-PGKTKHFQTLIIND---------KLMLCDC 242 Query: 92 PG 93 PG Sbjct: 243 PG 244 >gi|296270522|ref|YP_003653154.1| putative ABC transporter [Thermobispora bispora DSM 43833] gi|296093309|gb|ADG89261.1| putative ABC transporter [Thermobispora bispora DSM 43833] Length = 542 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 79/202 (39%), Gaps = 32/202 (15%) Query: 32 IAFSGRSNVGKSSLINIL---------VNRKNLARTS------NAPG--------RTQHL 68 +A +G + GKSSL N + V R ART + G + +H Sbjct: 58 VALAGGTGSGKSSLFNAVSKLDLSPTGVRRPTTARTHACVWGMDGAGPLLDWLQIQWRH- 116 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 F + L + L+D+P + RA + L + + L V++L Sbjct: 117 RFARASALDKGEERLHGLILLDLPDHDSIRALTDHE-------AHRLIQAADL-IVWVLD 168 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 ++ I Q + L VL + D+LSP E L + L++ A+P V Sbjct: 169 PQKYADASIHQRYVTELAGHDAVTVFVLNQCDRLSPEEQAECLADLRDLLKREGLANPRV 228 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 I TS+V +GI L + E + Sbjct: 229 IATSAVTGQGIAELTDVLAEAV 250 >gi|317049132|ref|YP_004116780.1| ribosome-associated GTPase EngA [Pantoea sp. At-9b] gi|316950749|gb|ADU70224.1| ribosome-associated GTPase EngA [Pantoea sp. At-9b] Length = 496 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V L+D R GV DQ + + Sbjct: 46 EVEGREFIVIDTGGIDGTEEGVENRMAEQSLLAIEEADVVLFLVDARAGVMPADQQIANH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D L P A Sbjct: 106 LRSRQKATFLVANKTDGLDPEAA 128 >gi|325283649|ref|YP_004256190.1| GTP-binding protein engA [Deinococcus proteolyticus MRP] gi|324315458|gb|ADY26573.1| GTP-binding protein engA [Deinococcus proteolyticus MRP] Length = 441 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 26/182 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL N L+ R+ A ++ PG T+ K+ L +N + LVD Sbjct: 3 KVAIVGRPNVGKSSLFNRLIGRRE-AVVADFPGVTRD-----AKEEIMLYHN-HRITLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G D W ++R +E + V ++D R G+ D +V +L + Sbjct: 56 TGGLWSG-------DEWEA-VIREKAEWALEGADAVIFVLDPRDGLSAADYEVADWLRRL 107 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V KID SP + YL + E + S+ +G++ L I+E Sbjct: 108 GRPVVVVANKID--SP-------KHEPYLAELWALGFGEPVAISAEHARGLDDLMDRIME 158 Query: 209 TI 210 + Sbjct: 159 HL 160 >gi|321249800|ref|XP_003191578.1| GTPase [Cryptococcus gattii WM276] gi|317458045|gb|ADV19791.1| GTPase, putative [Cryptococcus gattii WM276] Length = 636 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 12/71 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVPKDFSNLKNN 82 P P + G+ NVGKSSL+N L+ + + R S PG+T+H F+ PK Sbjct: 365 PSTEPLTLGLIGQPNVGKSSLLNALLGEQKV-RASRTPGKTKHFQTMFWGPKK------- 416 Query: 83 LPAMALVDMPG 93 + +VD PG Sbjct: 417 --EIKIVDCPG 425 >gi|317496611|ref|ZP_07954958.1| tRNA modification GTPase TrmE [Gemella moribillum M424] gi|316913276|gb|EFV34775.1| tRNA modification GTPase TrmE [Gemella moribillum M424] Length = 460 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ ++N A ++ G T+ V ++ N+K +P + L+D Sbjct: 226 AIIGRPNVGKSSLLNNLL-QENKAIVTDIAGTTRD----VLEEHVNIK-GVP-IKLIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + E++ L V L++ + D+++ + K + Sbjct: 279 GI---RETEDVVEKIGVERSKEALEKADL--VLFLLNSSEELTDDDRELLKLTEGK--TT 331 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I+L K+D L E +EK Y N+P +I TS KGI+ L K I Sbjct: 332 IIILNKLD-LETKIDIEEIEKLTY---NHP-----IIKTSMTTYKGIDELEKNI 376 >gi|297619420|ref|YP_003707525.1| small GTP-binding protein [Methanococcus voltae A3] gi|297378397|gb|ADI36552.1| small GTP-binding protein [Methanococcus voltae A3] Length = 354 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 34/205 (16%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L+ +P + LP + +G NVGKS+L+ + N + + P T+ LN Sbjct: 166 LKNIPTVKDLPS-----VVIAGYPNVGKSTLLKTITNAE--PEVNTYPFTTKGLNIGYTD 218 Query: 75 DFSNLKNNLPAMALVDMPGYG----YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + + +VD PG Y R +++ + + YLS+ +Y++ Sbjct: 219 E---------GIQIVDTPGVLDRPIYER---NDIELHAVIAINYLSDA----LIYVVDPT 262 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQI----VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 H ID + S L + ++++ V+TK D + ++ + + + + + + Sbjct: 263 EHCGFTIDAQI-SLLKEVEKTFKVPVIVVMTKSDLENTDMDEDKITRIENMEKELEDFN- 320 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 V+ SS+ ++GIE+LR ILETI Sbjct: 321 -VVKVSSISKEGIELLRLEILETIE 344 >gi|148244763|ref|YP_001219457.1| Era/TrmE family GTP-binding protein [Candidatus Vesicomyosocius okutanii HA] gi|146326590|dbj|BAF61733.1| GTP-binding protein, Era/TrmE family [Candidatus Vesicomyosocius okutanii HA] Length = 465 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 16/158 (10%) Query: 23 LLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 LLPK E IA G+ NVGKS+LIN ++ K + + PG T+ + ++P Sbjct: 164 LLPKVTVNEEVVEGITIAVLGKPNVGKSTLINHILREKRVIAI-DLPGTTRD-SIYIP-- 219 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + L+D G + + ++ + I++ ++ V L++D + GV Sbjct: 220 ---FERKGQQYTLIDTAGIRRKNSTHEKIEIFS--IIKTINALERAHVVILVLDAQTGVT 274 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 + D + + K + IV+ K D L QE K Sbjct: 275 KQDASLLGMILDKDKALLIVINKWDGLDDYQKQEVKRK 312 >gi|260662130|ref|ZP_05863026.1| ribosome-associated GTPase EngA [Lactobacillus fermentum 28-3-CHN] gi|260553513|gb|EEX26405.1| ribosome-associated GTPase EngA [Lactobacillus fermentum 28-3-CHN] Length = 437 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 16/170 (9%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALVD 90 +F GR NVGKSSL+N ++ +N S+ G T+ F KD +VD Sbjct: 178 SFIGRPNVGKSSLVNAILG-ENRVIVSDMAGTTRDAINTQFTAKDGREF-------TMVD 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +N + + ++R + V ++++ G++++D+ + + + Sbjct: 230 TAGIKKKGKLYENTERYA--LMRSMRAIDNSDVVLVVLNAEEGIRELDKHIAGYAHEAGR 287 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN---YPTAHPEVIPTSSVKRK 197 + IV+ K D + P Q T+ LIR+ Y + P V ++ K++ Sbjct: 288 AVIIVVNKWDTI-PDRDQRTMTDFTNLIRHEFQYLSYAPIVFVSAKTKQR 336 >gi|269859334|ref|XP_002649392.1| GTP-binding protein [Enterocytozoon bieneusi H348] gi|220067155|gb|EED44622.1| GTP-binding protein [Enterocytozoon bieneusi H348] Length = 328 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 58/140 (41%), Gaps = 29/140 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G NVGKSS IN ++N+ SN PG+T+H F +K N L D Sbjct: 197 IGFVGYPNVGKSSTIN-MINKMKKVSVSNTPGKTKH--------FQTIKGN--GFVLYDS 245 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + + K + G L ID +K + D+ F+ + +S Sbjct: 246 PGLIFPKHTKIELILMG----------------VLNIDHTMNLKDYENDIIKFIGEDVIS 289 Query: 152 --YQIVLTKIDKLSPTTAQE 169 Y+I L + + AQ+ Sbjct: 290 SYYKIQLYQNTNILELVAQK 309 >gi|300857411|ref|YP_003782395.1| putative tRNA modification GTPase [Clostridium ljungdahlii DSM 13528] gi|300437526|gb|ADK17293.1| predicted tRNA modification GTPase [Clostridium ljungdahlii DSM 13528] Length = 460 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 16/126 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+ R+N A ++ PG T+ V +++ N+ + +P + ++D G Sbjct: 231 GKPNVGKSSLLNSLI-RENRAIVTDVPGTTRD----VIEEYMNI-DGIP-IKVIDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R + V+ G + R + V L++D + D+++ +++ DKK Y I Sbjct: 283 --RETEDLVEKIG--VERSKQKIDEADLVILMLDSSEELDDEDKEIMNYVKDKK---YII 335 Query: 155 VLTKID 160 +L KID Sbjct: 336 LLNKID 341 >gi|94986558|ref|YP_594491.1| GTP-binding protein EngA [Lawsonia intracellularis PHE/MN1-00] gi|166225821|sp|Q1MS56|DER_LAWIP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|94730807|emb|CAJ54169.1| predicted GTPases [Lawsonia intracellularis PHE/MN1-00] Length = 453 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 16/139 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA GR NVGKS+L N L+ RKN A T + PG T+ + + + P+ L+ Sbjct: 3 PKIALVGRPNVGKSTLFNRLI-RKNRAITHDRPGVTRDRMEGLVQSIGH-----PSFILI 56 Query: 90 DMPG--YGYARAPKKNVDSWGGL------IVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 D G + +D G V+ E S C L+++ R G+ D+ + Sbjct: 57 DTGGVILDSHYSTINIIDELHGFEKDIFQQVQLAIEESQAIC--LIVNARDGLLPFDEHL 114 Query: 142 FSFLDKKAVSYQIVLTKID 160 FL K + + K+D Sbjct: 115 ALFLRKTGKPILLAVNKVD 133 Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 13/171 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR N GKSS+IN ++ + L SN G T+ + +P F N VD Sbjct: 191 KLAIIGRPNAGKSSIINAIIGKNKLI-VSNIAGTTRD-SIDIPFIF-----NKTQYLFVD 243 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL-LIDCRHGVKQIDQDVFSFLDKKA 149 G R K D V + +T + L +ID G+ D+ + LD + Sbjct: 244 TAGI---RRRTKITDPVERFSVNASIKSATKANITLYVIDATEGITAQDKRLLDLLDTRK 300 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + +++ K D ++ Q+TL + H ++ S+V G++ Sbjct: 301 IPFILLINKTDLIA--KKQKTLLSKSFKEELQFCPHIPILMVSAVTSSGLD 349 >gi|239997025|ref|ZP_04717549.1| GTP-binding protein EngA [Alteromonas macleodii ATCC 27126] Length = 481 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ + L Sbjct: 193 PIKLAIVGKPNVGKSTLTNRILGEERVV-VFDMPGTTRD-SVYIP-----MERDEREYIL 245 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + IV+ L V L+ID R G+ D + F+ Sbjct: 246 IDTAGVRKRKKISEAVEKFS--IVKTLQAIEEANVVLLVIDAREGITDQDLSLLGFVLNS 303 Query: 149 AVSYQIVLTKIDKLS 163 S + + K D LS Sbjct: 304 GRSLVVAVNKWDGLS 318 >gi|206891076|ref|YP_002248190.1| GTP-binding protein Era [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743014|gb|ACI22071.1| GTP-binding protein Era [Thermodesulfovibrio yellowstonii DSM 11347] Length = 289 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 30/182 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP--AMALV 89 +A GR NVGKS+LIN ++ K ++ + P T++ + +K NLP + + Sbjct: 6 VALIGRPNVGKSTLINTVIGEK-VSIVTEKPQTTRN-------RITGIK-NLPNAQIIFI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL--RCVYLLIDCRHGVKQIDQDVFSFLDK 147 D PG R G +V+ E + V+++ G D S +++ Sbjct: 57 DTPGIHKPR------HKLGEFMVKEAQEAMDMVDLIVFMVEPEAPG-----NDELSIIER 105 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKA 205 + V+ I+K+ Q L LI Y HP E+IP S++K+ GIE L + Sbjct: 106 LKKLNKPVILAINKIDTVAKQNLLP----LIELYNDLHPFQEIIPISALKKDGIERLVER 161 Query: 206 IL 207 I+ Sbjct: 162 II 163 >gi|182679392|ref|YP_001833538.1| GTP-binding protein Era [Beijerinckia indica subsp. indica ATCC 9039] gi|182635275|gb|ACB96049.1| GTP-binding protein Era [Beijerinckia indica subsp. indica ATCC 9039] Length = 316 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 24/139 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+LIN LV A+ S + Q V + + + VD Sbjct: 13 VALIGAPNAGKSTLINRLVG----AKISIVSRKVQTTRCLVRGIATEGASQI---IFVDT 65 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG APK+ +D +WGG V LL+D R G+ + + + + L Sbjct: 66 PGI---FAPKRRLDQAMVTSAWGGA--------GDADVVALLVDARKGIDEEVEAILAKL 114 Query: 146 DKKAVSYQIVLTKIDKLSP 164 + +VL KID + P Sbjct: 115 PQVRAKKLLVLNKIDTIEP 133 >gi|148269225|ref|YP_001243685.1| GTP-binding protein Era [Thermotoga petrophila RKU-1] gi|189037683|sp|A5IIT6|ERA_THEP1 RecName: Full=GTPase Era gi|147734769|gb|ABQ46109.1| GTP-binding protein Era [Thermotoga petrophila RKU-1] Length = 300 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 23/177 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LN-FFVPKDFSNLKNNLPAMALV 89 +A +G+ NVGKS+ IN+++ RK + S+ P T++ +N + +D + V Sbjct: 8 VALAGKPNVGKSTFINVVMGRK-VVIVSDKPQTTRNRINCIYTDRD--------SQIIFV 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG K + G +V+ + + + ++D G + D+ V + + Sbjct: 59 DTPGI------HKPLHRLGEYMVKAAVQALKGVDLILFMLDAADGFTKTDEHVAKIVSES 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLRK 204 I + KID A+ + K ++ N + H S++K +G+ EVL K Sbjct: 113 GTKTIIAVNKIDVAGEEKAKAVGQLAKSMVENVVSVH----YISALKGEGVFEVLEK 165 >gi|114569754|ref|YP_756434.1| small GTP-binding protein [Maricaulis maris MCS10] gi|114340216|gb|ABI65496.1| small GTP-binding protein [Maricaulis maris MCS10] Length = 490 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 74/184 (40%), Gaps = 24/184 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L K LA + PG V +D + L + L+ Sbjct: 6 PRIAVVGRPNVGKSTLFNRLAG-KPLAIVDDRPG--------VTRDRREARGRLGDLPLL 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 + GY + K +D+ +R +E + LLID R GV +D F D Sbjct: 57 LIDTAGYDDSEKDGLDAE----MRTQTEMAIHDADLCLLLIDARAGVTPLD---VVFADV 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 S + VL +K + LI + E I S+ GI L A++ Sbjct: 110 IRRSGKPVLLLANKCEGKAGESG------LIDAFELGMGEPIAFSAAHGAGIGDLYDAVV 163 Query: 208 ETIN 211 T+ Sbjct: 164 HTLG 167 >gi|70916139|ref|XP_732410.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56503256|emb|CAH83098.1| hypothetical protein PC300323.00.0 [Plasmodium chabaudi chabaudi] Length = 135 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 19/124 (15%) Query: 48 ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP------- 100 I VN + S G T+ +N + F N K L DMPG GYA Sbjct: 1 INVNDNTNIKVSKRSGCTRSINLY---SFENAKKK-KLFILTDMPGLGYAEGIGEKKMEY 56 Query: 101 -KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKI 159 KKN+D Y+ R+ + ++LID +++ID + + K + +++ TK Sbjct: 57 LKKNLDD-------YVYLRNQICLFFILIDMSVDIQKIDISLVDAIRKTGIPLRVICTKC 109 Query: 160 DKLS 163 DK + Sbjct: 110 DKFN 113 >gi|329769256|ref|ZP_08260673.1| tRNA modification GTPase TrmE [Gemella sanguinis M325] gi|328839250|gb|EGF88833.1| tRNA modification GTPase TrmE [Gemella sanguinis M325] Length = 460 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ ++N A ++ G T+ V +++ N+K +P + L+D Sbjct: 226 AIIGRPNVGKSSLLNNLL-QENKAIVTDIAGTTRD----VLEEYVNIK-GVP-IKLIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R V+ G + E++ L V L++ + + D+++ K + Sbjct: 279 GI---RETDDIVEQIGVQRSKDALEKADL--VLFLLNSSEELTEDDKELLKL--TKGKTT 331 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L K+D + LE+ + L N+P +I TS KGI+ L K I Sbjct: 332 IVILNKLDLETKI----DLEEVEKLAHNHP-----IIKTSMTTYKGIDELEKNI 376 >gi|323340745|ref|ZP_08080997.1| ribosome-associated GTPase EngA [Lactobacillus ruminis ATCC 25644] gi|323091868|gb|EFZ34488.1| ribosome-associated GTPase EngA [Lactobacillus ruminis ATCC 25644] Length = 436 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 10/148 (6%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 +F GR NVGKSSL+N ++ +N SN G T+ + F+ ++ M +D Sbjct: 178 SFIGRPNVGKSSLVNAILG-ENRVIVSNIEGTTRDA---IDTKFTTEDGSVYTM--IDTA 231 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G +N + + L +RS + CV L + G+++ D+ V + Sbjct: 232 GIRKKGKVYENTEKYSVLRAMQAIDRSDVVCVVL--NAEEGIREQDKHVAGYAHDAGRGI 289 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRN 180 IV+ K D L + T+++ + IRN Sbjct: 290 VIVVNKWDTLKKDSY--TMKEFESHIRN 315 >gi|296106525|ref|YP_003618225.1| GTP-binding protein Era [Legionella pneumophila 2300/99 Alcoy] gi|295648426|gb|ADG24273.1| GTP-binding protein Era [Legionella pneumophila 2300/99 Alcoy] Length = 295 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 20/139 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKS+L+N ++ +K L+ TS P T+H L +F V Sbjct: 8 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTEDEFQ--------FVYV 58 Query: 90 DMPG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D PG G A+A + ++ ++R + + L+D H K D+ V + + Sbjct: 59 DTPGIHQGNAKAINRMMNKTAISVLR------DVDVIAFLVDGTHW-KDEDEYVLNLIKH 111 Query: 148 KAVSYQIVLTKIDKLSPTT 166 V +V+ K+DK++ T Sbjct: 112 AKVPCILVVNKVDKITDKT 130 >gi|167752992|ref|ZP_02425119.1| hypothetical protein ALIPUT_01255 [Alistipes putredinis DSM 17216] gi|167659306|gb|EDS03436.1| hypothetical protein ALIPUT_01255 [Alistipes putredinis DSM 17216] Length = 394 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 29/189 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+A IAF GR N GKSSLIN L +++ A S PG T P + + L Sbjct: 6 PRAERLHIAFYGRRNSGKSSLINALTGQQS-AVVSATPGTTTD-----PVLKTMEIHGLG 59 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHG-VKQIDQ-DV 141 L+D PG+ D G L +R R L L + G V Q D+ + Sbjct: 60 PCVLIDTPGF----------DDEGDLGALRVQQSRKMLDKTDLAVLLLSGAVPQNDEIEW 109 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F L+ + + +V +K D + + E + L P + S+ R G++ Sbjct: 110 FRLLEARHIPIVVVRSKADLFTGMSDAE----AEALFGQRP------LRVSASDRTGLDA 159 Query: 202 LRKAILETI 210 LR+A++ + Sbjct: 160 LREALIRNL 168 >gi|118443488|ref|YP_878327.1| GTP-binding protein EngA [Clostridium novyi NT] gi|166224330|sp|A0Q125|DER_CLONN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|118133944|gb|ABK60988.1| GTP-binding protein engA [Clostridium novyi NT] Length = 438 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 30/186 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L ++ +A + PG T+ + ++ L NN Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-IAIVDDMPGVTRD-RIYAEAEW--LNNNF---T 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G P+ + +IV + ++ L V ++D + G+ D++V Sbjct: 55 IIDTGGI----EPEND-----DIIVAQMRRQAQLAIEMADVVLFIVDGKQGLTDADREVA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L K + S + + KID+ L+ Y N P +P S+ + G+ L Sbjct: 106 HMLRKASKSIVLAVNKIDR-------RQLDDNIYEFYNLGLGDP--MPISASQGLGLGDL 156 Query: 203 RKAILE 208 ++E Sbjct: 157 LDEVIE 162 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 13/131 (9%) Query: 32 IAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKSSLIN IL K++ SN PG T+ ++ +V + L+ Sbjct: 179 IAMIGRPNVGKSSLINKILGEEKHI--VSNIPGTTRDAVDSYVETEEGKF-------VLI 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ V+ + VR L+ L+ID + + D+ + + + Sbjct: 230 DTAGLRRKSKIKEQVERYSA--VRTLASIENADVCILMIDATEDIAEQDERIIGYAHEIN 287 Query: 150 VSYQIVLTKID 160 + +++ K D Sbjct: 288 KAILVIVNKWD 298 >gi|242278632|ref|YP_002990761.1| GTP-binding proten HflX [Desulfovibrio salexigens DSM 2638] gi|242121526|gb|ACS79222.1| GTP-binding proten HflX [Desulfovibrio salexigens DSM 2638] Length = 531 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 37/195 (18%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP- 84 +AG P ++ G +N GKS+L+N L N LA F D ++ + P Sbjct: 359 RAGVPVVSLVGYTNAGKSTLLNTLTNSGVLAED----------KLFATLDPTSRRIRFPR 408 Query: 85 --AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + L D G+ + PK+ +++ L E + + D H ++D+ + Sbjct: 409 EQELILTDTVGF-IRQLPKELKEAFRA----TLEELEAADVLLHVCDSSH--PEVDEQIA 461 Query: 143 S----FLDKK--AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + D K V+ +VL K DKL ++ + L+RN +P+ IP+S+V R Sbjct: 462 AVNNIVADMKLGDVATILVLNKWDKLD--------DEQRELMRN---TYPQGIPSSAVDR 510 Query: 197 KGIEVLRKAILETIN 211 + + +L + IL I+ Sbjct: 511 RSLNLLVEEILNAID 525 >gi|15894988|ref|NP_348337.1| GTP-binding protein EngA [Clostridium acetobutylicum ATCC 824] gi|26006729|sp|Q97ID7|DER_CLOAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|15024676|gb|AAK79677.1|AE007680_10 Predicted GTPase [Clostridium acetobutylicum ATCC 824] gi|325509125|gb|ADZ20761.1| GTP-binding protein EngA [Clostridium acetobutylicum EA 2018] Length = 438 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 11/131 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 +IAF G+ NVGKSSL N ++ + + S+ PG T+ ++ F+ DF L L+ Sbjct: 178 KIAFVGKPNVGKSSLTNRILGEERVI-VSDIPGTTRDAIDSFLETDFGKL-------VLI 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + VR ++ L++D + + D+ + + + Sbjct: 230 DTAGLRRKSRIKEEIERYSA--VRTMAAIERCDVCTLILDATEPISEQDERIIGYAHENN 287 Query: 150 VSYQIVLTKID 160 + +++ K D Sbjct: 288 KAILVIVNKWD 298 >gi|146306508|ref|YP_001186973.1| GTP-binding protein Era [Pseudomonas mendocina ymp] gi|189037659|sp|A4XSC5|ERA_PSEMY RecName: Full=GTPase Era gi|145574709|gb|ABP84241.1| GTP-binding protein Era [Pseudomonas mendocina ymp] Length = 299 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 24/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K LA TS P T+H N K ++ VD Sbjct: 12 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-NMLGIKTEGEIQ-----AVYVDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG N RY+ S S L+ V +++ + D+D + Sbjct: 65 PGLHKHNDKALN---------RYMNRSASSALKDVDVVVFVVDRTRWTDEDQLVLEKVQH 115 Query: 150 VSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V I+L K D+L + E L +L P A E++P S+++ + ++ L K + Sbjct: 116 VKCPILLAVNKADRLEDKS--ELLPHLNWLAEQLPQA--EIVPISALQGQNLDTLEKLVG 171 Query: 208 ETI 210 E + Sbjct: 172 ERL 174 >gi|299783191|gb|ADJ41189.1| GTP-binding protein engA [Lactobacillus fermentum CECT 5716] Length = 370 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 16/170 (9%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALVD 90 +F GR NVGKSSL+N ++ +N S+ G T+ F KD +VD Sbjct: 178 SFIGRPNVGKSSLVNAILG-ENRVIVSDMAGTTRDAINTQFTAKDGREF-------TMVD 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +N + + ++R + V ++++ G++++D+ + + + Sbjct: 230 TAGIKKKGKLYENTERYA--LMRSMRAIDDSDVVLVVLNAEEGIRELDKHIAGYAHEAGR 287 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN---YPTAHPEVIPTSSVKRK 197 + IV+ K D + P Q T+ LIR+ Y + P V ++ K++ Sbjct: 288 AVIIVVNKWDTI-PDRDQRTMTDFTNLIRHEFQYLSYAPIVFVSAKTKQR 336 >gi|257457196|ref|ZP_05622372.1| ribosome-associated GTPase EngA [Treponema vincentii ATCC 35580] gi|257445455|gb|EEV20522.1| ribosome-associated GTPase EngA [Treponema vincentii ATCC 35580] Length = 506 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 7/83 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + +GR NVGKS+L N + RK A T PG T+ P + + N LP + L+ Sbjct: 60 PLVVIAGRPNVGKSTLFNRFL-RKRRAITDPTPGVTRD-----PIEAQAIINGLP-VRLM 112 Query: 90 DMPGYGYARAPKKNVDSWGGLIV 112 D G+ R+ KN D L+V Sbjct: 113 DTGGFKLTRSGDKNDDMMDELVV 135 >gi|116626742|ref|YP_828898.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076] gi|116229904|gb|ABJ88613.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076] Length = 304 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 36/187 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN--NLPAMALV 89 ++ GR N GKS+L+N LV +K +A ++ P T+ ++++ LP +V Sbjct: 10 VSLIGRPNAGKSTLLNALVGQK-VAIVADKPQTTR----------TSIQGVLTLPEAQIV 58 Query: 90 --DMPGYGYARAP--KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 D PG A P K+ +D+ G L ER L V D + D+ Sbjct: 59 FADTPGIHKADTPLNKRLMDTVRG----ALEERDLLLFV---ADATRKFNEDDRRAIDIA 111 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKY--LIRNYPTAHP--EVIPTSSVKRKGIEV 201 + +VL KID L +K LI Y E +P SSVK+ G++ Sbjct: 112 RRHKTPVVLVLNKIDLLK--------DKAHLLPLIEEYKAVFEFTEYVPVSSVKKIGLDQ 163 Query: 202 LRKAILE 208 LR IL+ Sbjct: 164 LRAVILK 170 >gi|15616624|ref|NP_244930.1| tRNA modification GTPase TrmE [Bacillus halodurans C-125] gi|14195295|sp|Q9RCA7|MNME_BACHD RecName: Full=tRNA modification GTPase mnmE gi|5672642|dbj|BAA82680.1| 77%-identity [Bacillus halodurans] gi|10176687|dbj|BAB07781.1| thiophen and furan oxidation [Bacillus halodurans C-125] Length = 458 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ +N A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 227 GRPNVGKSSLLNSLVH-ENKAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 278 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L + L+++ + + D+ +F +A+S Sbjct: 279 --RETEDIVERIGVERSREVLKEAEL--ILLVLNFGEELSKEDEALF-----EAISGMEA 329 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + ++K T ++ ++ T+ +R P VI TS V+ +GI+ L AI Sbjct: 330 IVIVNK---TDVEQKIDLTR--VRELAAGRP-VITTSIVQDQGIDELEAAI 374 >gi|71908594|ref|YP_286181.1| GTP-binding protein EngA [Dechloromonas aromatica RCB] gi|123760409|sp|Q47BS0|DER_DECAR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71848215|gb|AAZ47711.1| Small GTP-binding protein protein domain:GTP-binding protein [Dechloromonas aromatica RCB] Length = 443 Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 22/176 (12%) Query: 15 LRGVPEIGLLPKAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +RG+ E+ L P E +A GR NVGKS+LIN L+ + + +APG T Sbjct: 152 IRGLVEMALESFPEPEEDEWHSDSVRVAIVGRPNVGKSTLINTLLGEERVI-AFDAPGTT 210 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + + DF LVD G ++++ + +V+ L V Sbjct: 211 RDS---IEIDFERGGRKY---VLVDTAGMRKRGKVFESIEKFS--VVKTLQSIEDANVVI 262 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE----KTKYL 177 L++D + V D + F+ + + + + K D L T ++T + K K+L Sbjct: 263 LMVDAQADVSDQDAHIADFILQSGRALVVAVNKWDGLDAYTREQTRQILQRKLKFL 318 >gi|319794354|ref|YP_004155994.1| ribosome-associated GTPase enga [Variovorax paradoxus EPS] gi|315596817|gb|ADU37883.1| ribosome-associated GTPase EngA [Variovorax paradoxus EPS] Length = 447 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 17/184 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A +GR NVGKS+LIN + + L + PG T+ VP + N L Sbjct: 180 PIKLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDA-ISVP-----FERNGQRFEL 232 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L + V LL+D GV D + ++ + Sbjct: 233 IDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILES 290 Query: 149 AVSYQIVLTK---IDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K +D Q +E T+ + + H S++KR+G+ + +A Sbjct: 291 GRAVVIAINKWDAVDSYQREQIQRQIE-TRLPFLKFASLH----FISAIKRQGLGPVWQA 345 Query: 206 ILET 209 I + Sbjct: 346 IAQA 349 >gi|149375007|ref|ZP_01892780.1| predicted GTPase [Marinobacter algicola DG893] gi|149360896|gb|EDM49347.1| predicted GTPase [Marinobacter algicola DG893] Length = 453 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 9/144 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L+N ++ + + PG T+ + ++P F + N L+D Sbjct: 158 IGIVGRPNVGKSTLVNRMLGEDRVI-VYDMPGTTRD-SVYIP--FERMDNQY---TLIDT 210 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + V+ + I++ L V L+ID R G+ D + F+ S Sbjct: 211 AGVRRRKNVSEVVEKFS--IIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRS 268 Query: 152 YQIVLTKIDKLSPTTAQETLEKTK 175 + + K D + P + E+ + Sbjct: 269 LVVAVNKWDGMDPEDRAKVKEQVQ 292 >gi|224373288|ref|YP_002607660.1| GTP-binding protein Era [Nautilia profundicola AmH] gi|223589409|gb|ACM93145.1| GTP-binding protein Era [Nautilia profundicola AmH] Length = 293 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 21/184 (11%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +PK+G + G+ N GKS+L+N L+ K + A + +N V + Sbjct: 1 MPKSGF--VGILGKPNAGKSTLLNWLLGEKIALVSPKANASRKRVNAIV-------MHGD 51 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + L+D PG +K ++ + ++ L S V L D R + + F Sbjct: 52 DQIILLDTPG---LHEKEKLLNKF--MLKEALKALSDSDLVLFLADVRDDLSGYEW--FL 104 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L+ K + + +VLTK D +S ++ +E+ K L + +VIP S+V+ KG + L Sbjct: 105 ELNTKNIPHIVVLTKTDLVSEEEVRKKIEEYKKLGKAL-----DVIPISAVEGKGKDELL 159 Query: 204 KAIL 207 AI+ Sbjct: 160 NAIV 163 >gi|319763709|ref|YP_004127646.1| ribosome-associated gtpase enga [Alicycliphilus denitrificans BC] gi|330824028|ref|YP_004387331.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans K601] gi|317118270|gb|ADV00759.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans BC] gi|329309400|gb|AEB83815.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans K601] Length = 447 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 20/198 (10%) Query: 18 VPEIG---LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +PE G ++ +A +A +GR NVGKS+LIN + + L + PG T+ VP Sbjct: 165 LPEAGEGDVVAEANVIRLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDA-ISVP- 221 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + N L+D G + ++ + +V+ L + V LL+D GV Sbjct: 222 ----FERNGQKFELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGV 275 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK---TKYLIRNYPTAHPEVIPT 191 D + ++ + + I + K D + Q+ LE+ T+ + H Sbjct: 276 TDQDAHIAGYILESGRAVVIAVNKWDAVDDYGRQQ-LERSIETRLSFLKFAPLH----FI 330 Query: 192 SSVKRKGIEVLRKAILET 209 S++KR+GI L +I++ Sbjct: 331 SAMKRQGIGPLWASIVQA 348 >gi|255690242|ref|ZP_05413917.1| GTP-binding protein [Bacteroides finegoldii DSM 17565] gi|260624262|gb|EEX47133.1| GTP-binding protein [Bacteroides finegoldii DSM 17565] Length = 396 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 79/190 (41%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A IA GR N GKSSL+N L ++ A S+ PG T L V K ++ P Sbjct: 7 PNANRLHIALFGRRNSGKSSLVNALTG-QDTALVSDTPGTTTDL---VSKAM-EMQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L + R L LL C +++ Sbjct: 62 CL-FIDTPGF----------DDEGELGELRVSRTLKAIEKTDIALLL--CGDTTFSHEKE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L +K + VL KID + + T + + IR + E I GIE Sbjct: 109 MLALLKEKNIPVIPVLNKIDIRENSDSLATYIEKECKIRPLLVSAKEEI--------GIE 160 Query: 201 VLRKAILETI 210 +R+AILE + Sbjct: 161 QIRQAILEKL 170 >gi|153853314|ref|ZP_01994723.1| hypothetical protein DORLON_00710 [Dorea longicatena DSM 13814] gi|149754100|gb|EDM64031.1| hypothetical protein DORLON_00710 [Dorea longicatena DSM 13814] Length = 442 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 18/152 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G+ NVGKSS+IN L ++ + S+ G T+ +N+K N + Sbjct: 178 PRVAIVGKPNVGKSSIINKLTGKQRVI-VSDVAGTTRDAI------DTNVKYNGKDYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKSKIKEELERYS--IIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 IV+ K D +EK +R Y Sbjct: 289 KGIIIVVNKWD---------AIEKNDKTMREY 311 >gi|120610115|ref|YP_969793.1| GTP-binding protein EngA [Acidovorax citrulli AAC00-1] gi|166224298|sp|A1TM31|DER_ACIAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120588579|gb|ABM32019.1| small GTP-binding protein [Acidovorax citrulli AAC00-1] Length = 447 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ G T+ + + N K ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKSRD-AIVADFAGLTRD------RHYGNGKLGKHEYIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + + V ++D R G+ D D+ ++L + Sbjct: 56 DTGGF----EPDASSGIYREMAKQTQQAVAEADVVIFVVDARAGLSAQDHDIANYLRRLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K E + + L Y EV+P S+ +G+ + ++ L+T Sbjct: 112 KPCLLVGNK---------AEGMREGVQLAEFYELGLGEVLPVSAAHGQGVRSMLESALDT 162 Query: 210 IN 211 + Sbjct: 163 LQ 164 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 10/146 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A +GR NVGKS+LIN + + L + PG T+ VP + N L Sbjct: 179 PIRLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRD-AISVP-----FERNGQQFEL 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L + V LL+D GV D + ++ + Sbjct: 232 IDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILES 289 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKT 174 + + + K D + ++ LE++ Sbjct: 290 GRAVVLAVNKWDAVD-DYGRQMLERS 314 >gi|310827223|ref|YP_003959580.1| hypothetical protein ELI_1631 [Eubacterium limosum KIST612] gi|308738957|gb|ADO36617.1| hypothetical protein ELI_1631 [Eubacterium limosum KIST612] Length = 439 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 11/150 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA G+ N GKS+LIN +V L S+ PG T+ + ++ N L+D Sbjct: 179 KIAVIGKPNAGKSTLINKMVGHDRLI-VSDVPGTTRDAI------DTEVRFNGRDYTLID 231 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++++ + IVR ++ V +LID GV + D + ++ Sbjct: 232 TAGLRKKKKIYEDIERYS--IVRAIAAVDRSDVVLVLIDGEKGVTEQDAKIAGIAHNRSK 289 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 I++ K D + T +T++K K IR+ Sbjct: 290 PSIIIVNKWDIVEKDT--KTMDKMKREIRD 317 >gi|195952865|ref|YP_002121155.1| small GTP-binding protein [Hydrogenobaculum sp. Y04AAS1] gi|195932477|gb|ACG57177.1| small GTP-binding protein [Hydrogenobaculum sp. Y04AAS1] Length = 429 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 27/190 (14%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 L KA +++F G+ N GKSSL+N ++ +++ SN G T+ V +FS + Sbjct: 165 LEEKADFIKLSFVGKPNSGKSSLLNSIL-KQDRVIVSNIAGTTRDA---VDVEFSYEGKD 220 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY------LLIDCRHGVKQ 136 LVD G R P N+D +G V + + +L + L+ID GV + Sbjct: 221 F---ILVDTAG---IRRPS-NID-YG---VEFFAVNRSLEAIEKSDVCALVIDATEGVSR 269 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPT 191 D + S +++K +VL KID + A + LE + R Y +A E I Sbjct: 270 QDMRLASLVNRKGKGLIVVLNKIDLIKDIEALKKHVDKKLEFVYFAPRVYVSAK-EGINV 328 Query: 192 SSVKRKGIEV 201 S+ +K I++ Sbjct: 329 FSILQKAIDI 338 >gi|308273513|emb|CBX30115.1| tRNA modification GTPase mnmE [uncultured Desulfobacterium sp.] Length = 460 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 25/178 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + +GR NVGKSSL+N+L+ ++ TS PG T+ + D + + + +PA+ + D Sbjct: 226 VVIAGRPNVGKSSLMNVLLKKERSIVTS-IPGTTRDI-----IDETIIISGIPAV-IFDT 278 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAV 150 G+ P V+ G I + L + + ++D + + D+ + + DK+ + Sbjct: 279 AGFHNTVDP---VEEIG--IQKALEIINNSDIILFMLDVINPFTEDDRTLLEIVKDKELI 333 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +VL KID L+ + E ++ K +P ++ SS+ GI+VL++ I E Sbjct: 334 ---VVLNKIDLLNENSLIEINKELKC----FP-----IVRVSSLCNTGIDVLKETIKE 379 >gi|297568834|ref|YP_003690178.1| ribosome-associated GTPase EngA [Desulfurivibrio alkaliphilus AHT2] gi|296924749|gb|ADH85559.1| ribosome-associated GTPase EngA [Desulfurivibrio alkaliphilus AHT2] Length = 487 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 17/142 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 +AF GR NVGKSSLIN L+ + + SN PG T+ D L L+ Sbjct: 229 VAFIGRPNVGKSSLINRLLGEERMV-VSNLPGTTRDSVDTLLTRADKKYL--------LI 279 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDK 147 D G + V+ + ++R L R+ RC ++ID GV + D V + + Sbjct: 280 DTAGIRRKGKVHEKVEKFS--VLRAL--RTLERCDLALIVIDALEGVTEQDTKVLGYGLE 335 Query: 148 KAVSYQIVLTKIDKLSPTTAQE 169 + + ++L K D + Q+ Sbjct: 336 RGRACLVLLNKWDLIEHDRKQQ 357 Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 29/175 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKSSL N L + A PG T+ + + + N LV Sbjct: 50 PLVALVGRPNVGKSSLFNRLAGSRK-AIVDPTPGVTRD------RHYEKITWNDRRFILV 102 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERST-----LRCVYLLIDCRHGVKQIDQDVFSF 144 D G + N R + E+++ V L+D R G+ DQ+V Sbjct: 103 DTGGLESDTTTEIN---------RLIQEQTSQAVAEADVVLFLLDGREGILPDDQEVVEI 153 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + ++ KID +P A K L Y E+ P S+ +GI Sbjct: 154 LRRSGKKVFYLINKID--APEQA------AKLLPTFYELGVEELWPVSAEHGQGI 200 >gi|149194255|ref|ZP_01871352.1| GTP-binding protein Era [Caminibacter mediatlanticus TB-2] gi|149135430|gb|EDM23909.1| GTP-binding protein Era [Caminibacter mediatlanticus TB-2] Length = 293 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 21/184 (11%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +PK+G + G+ N GKS+L+N L+ K + A + +N V +N Sbjct: 1 MPKSGF--VGIIGKPNAGKSTLLNWLLGEKIALVSPKANASRKRVNAIV-------MHND 51 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + L+D PG +K ++ + ++ L S V L D R ++ + F Sbjct: 52 DQIILLDTPG---LHEKEKLLNKF--MLKEALKALSDSDLVLFLADVRDDLEGYEW--FL 104 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L+KK + + +VLTK D ++ + +E+ K + + +IP S+++ KG E L Sbjct: 105 ELNKKNIPHIVVLTKTDLVNEEEVKNKIEEYKKIGKALV-----IIPISAIEGKGKEELL 159 Query: 204 KAIL 207 I+ Sbjct: 160 DEIV 163 >gi|163848650|ref|YP_001636694.1| GTP-binding protein EngA [Chloroflexus aurantiacus J-10-fl] gi|222526586|ref|YP_002571057.1| GTP-binding protein EngA [Chloroflexus sp. Y-400-fl] gi|189037140|sp|A9WHH9|DER_CHLAA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783145|sp|B9LBT6|DER_CHLSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|163669939|gb|ABY36305.1| small GTP-binding protein [Chloroflexus aurantiacus J-10-fl] gi|222450465|gb|ACM54731.1| small GTP-binding protein [Chloroflexus sp. Y-400-fl] Length = 449 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 13/134 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N L+ ++ + S+ PG T+ P D + + P + L+D Sbjct: 185 IAIVGRPNVGKSSLLNRLLGQER-SVVSSIPGTTRD-----PIDTTITYHGEP-ITLIDT 237 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDKKA 149 G A ++ ++ + ++R L R+ RC LLID GV D + + + Sbjct: 238 AGIRRAGKIERGIEKYS--VLRTL--RAIERCDVALLLIDATEGVTAQDTHIAGMVVEAK 293 Query: 150 VSYQIVLTKIDKLS 163 +V+ K D + Sbjct: 294 KGLILVVNKWDAIE 307 >gi|205371919|ref|ZP_03224739.1| tRNA modification GTPase TrmE [Bacillus coahuilensis m4-4] Length = 461 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 25/172 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ +N A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 230 GRPNVGKSSLLNSLVH-ENKAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L LL+ HG + ++D F KAV V Sbjct: 282 --RETEDIVERIGVEKSRQVLKEADL----LLLVLNHGDEFTEEDENLF---KAVEGMDV 332 Query: 156 LTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + ++K P +EK + L +N+ ++ TS + +GI+ L +AI Sbjct: 333 IVIVNKTDLPQVI--NMEKVRELSKNH-----RLVTTSLKEEQGIDELEEAI 377 >gi|119713399|gb|ABL97461.1| GTP-binding protein Era [uncultured marine bacterium HF130_81H07] Length = 294 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 24/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ +GR+NVGKS+L+N + +K +A TS P T++ + FS+ KN + +D Sbjct: 8 VSLTGRTNVGKSTLLNSIFQKK-IAITSRKPQTTRNRILGI---FSDEKN---QIVFLDS 60 Query: 92 PGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG G+ RA ++ + + R E L V +ID +++ ++++ L + Sbjct: 61 PGVHSGHRRA----LNKYMNKVARTCYEEVDL--VIFVIDRGRWLRE-EENILKNLKELD 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID+L ++ + + H +IP S++++ +E L +L Sbjct: 114 KPIILVINKIDRLKNRNG------ILPIMNDLNSKHNFEAIIPISALRKDNLEDLLSKVL 167 Query: 208 ETI 210 E I Sbjct: 168 EKI 170 >gi|7208811|emb|CAB76934.1| putative GTP-binding protein [Clostridium thermocellum] Length = 400 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 20/140 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I F G+ N GKSS++N V +NLA S+ G T + V K L L Sbjct: 7 PSANRLHIGFFGKRNAGKSSVVN-AVTGQNLAIVSDVKGTTTNP---VYKAMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLR---CVYLLIDCRHGVKQIDQD 140 + ++D PG +D G L +R R L L+ID G + D+ Sbjct: 61 PVVIIDTPG----------IDDKGTLGEMRVKRSRQVLNKTDIAVLVIDATCGKSEDDEK 110 Query: 141 VFSFLDKKAVSYQIVLTKID 160 + +KK + Y +V K D Sbjct: 111 LIELFEKKDIKYVVVYNKAD 130 >gi|303327492|ref|ZP_07357933.1| ribosome-associated GTPase EngA [Desulfovibrio sp. 3_1_syn3] gi|302862432|gb|EFL85365.1| ribosome-associated GTPase EngA [Desulfovibrio sp. 3_1_syn3] Length = 452 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 12/145 (8%) Query: 18 VPEIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 +PE + P A P +A GR N GKSSLIN L + + + A ++ +D Sbjct: 177 LPEGAVEPPAPPALRLAMLGRPNAGKSSLINALAGEERMIVSDVAGTTRDSVDVRFRRDG 236 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL-IDCRHGVK 135 + VD G R + DS V + ST V LL +D GV Sbjct: 237 QD-------YVFVDTAG---VRRRTRITDSVEKYSVNAAIKSSTKADVTLLTLDATEGVS 286 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKID 160 Q D+ + LD + + +++ K D Sbjct: 287 QQDKRLMDMLDTRKTPFMVLINKCD 311 >gi|295695440|ref|YP_003588678.1| GTP-binding protein Era [Bacillus tusciae DSM 2912] gi|295411042|gb|ADG05534.1| GTP-binding protein Era [Bacillus tusciae DSM 2912] Length = 300 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 17/178 (9%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKS+L+N L+ K +A S+ P T++ + L + +D P Sbjct: 13 ALVGRPNVGKSTLLNRLIGTK-IAIMSDKPQTTRN------RIRGVLTRENGQVIFLDTP 65 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G PK + + + L+ + V +ID +Q + L Sbjct: 66 G---VHRPKHRLGDYMNRLA--LATLQEVDLVLFVIDVTSKFGPGEQVILDHLQGVETPV 120 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID +SP +E L + YP EV+P S+VK ++ L + I T+ Sbjct: 121 FLVINKIDLVSP---EELLPMIDEHRKRYPFR--EVVPVSAVKGTNLDRLEERIFATL 173 >gi|54297453|ref|YP_123822.1| GTP-binding protein EngA [Legionella pneumophila str. Paris] gi|148359075|ref|YP_001250282.1| GTP-binding protein EngA [Legionella pneumophila str. Corby] gi|296107123|ref|YP_003618823.1| GTP-binding protein EngA [Legionella pneumophila 2300/99 Alcoy] gi|81822576|sp|Q5X522|DER_LEGPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225822|sp|A5IC36|DER_LEGPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|53751238|emb|CAH12649.1| hypothetical protein lpp1498 [Legionella pneumophila str. Paris] gi|148280848|gb|ABQ54936.1| GTP-binding protein EngA [Legionella pneumophila str. Corby] gi|295649024|gb|ADG24871.1| GTP-binding protein EngA [Legionella pneumophila 2300/99 Alcoy] Length = 462 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + ++ A ++ PG T+ + + + ++ + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRITKTQD-ALVADFPGLTR------DRQYGHAQHENKSFIIV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G + S + L+E + + L+D R G+ IDQ + L K Sbjct: 56 DTGGIGVDDIEVDTLMSRQSQVA--LNEAN---VILFLVDGRSGLTGIDQQIAQALRKLN 110 Query: 150 VSYQIVLTKIDKLSPTTA 167 +V+ K D ++ A Sbjct: 111 KKVHLVVNKTDGMNEDIA 128 Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 9/133 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IAF+GR NVGKS+LIN ++ + + + PG T+ + +P L+D Sbjct: 176 KIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRD-SISIP-----FTREDKQYVLID 228 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +++ L LL+D G+ D ++ F+ + Sbjct: 229 TAGVRRKSRIDEKIEKFS--VIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGK 286 Query: 151 SYQIVLTKIDKLS 163 + I + K D L Sbjct: 287 ALVIAVNKWDGLE 299 >gi|301608145|ref|XP_002933653.1| PREDICTED: septin-4-like [Xenopus (Silurana) tropicalis] Length = 416 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 31/201 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSN--APGRTQHLNFFVPKDFSNLKNNLPAMAL- 88 + +G S +GKS+LIN L +L R + +P + K +++ + L Sbjct: 85 LMVAGESGLGKSTLINSLF-LTDLYRDRHILSPEERVTQTVEIVKQTVDIQEKGVRLRLT 143 Query: 89 -VDMPGYGYA---------------RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 VD PGYG A + ++ GL R L + C+Y L H Sbjct: 144 VVDTPGYGDAINNEICWKPVADYIDQQFEQYFRDESGLNRRNLQDTRVHCCLYFLSPLGH 203 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-----TKYLIRNYPTAHPE 187 G++ +D + L K V+ +L K D L+PT Q+ ++ KY IR Y PE Sbjct: 204 GMRPMDIEFLQALQDK-VNIVPILGKADSLTPTELQQKKQRIRDEIDKYGIRIY--QFPE 260 Query: 188 VIP--TSSVKRKGIEVLRKAI 206 P K++ IE L+K+I Sbjct: 261 CDPDEDEDFKQQDIE-LKKSI 280 >gi|302808181|ref|XP_002985785.1| hypothetical protein SELMODRAFT_229145 [Selaginella moellendorffii] gi|300146292|gb|EFJ12962.1| hypothetical protein SELMODRAFT_229145 [Selaginella moellendorffii] Length = 487 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN+LV K TS PG+T+H + D + L D Sbjct: 193 VGFVGYPNVGKSSTINVLVGEKRTGVTST-PGKTKHFQTLIIND---------RLMLCDC 242 Query: 92 PG 93 PG Sbjct: 243 PG 244 >gi|302874737|ref|YP_003843370.1| ribosome-associated GTPase EngA [Clostridium cellulovorans 743B] gi|307690648|ref|ZP_07633094.1| GTP-binding protein EngA [Clostridium cellulovorans 743B] gi|302577594|gb|ADL51606.1| ribosome-associated GTPase EngA [Clostridium cellulovorans 743B] Length = 438 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 26/170 (15%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF----FVPKDFSNLKNNL 83 G P +A GR NVGKS+L N L ++ +A + PG T+ + +V ++F+ Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-IAIVEDKPGVTRDRIYASSEWVGQEFT------ 54 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G PK + + + L T + ++D + G+ D++V Sbjct: 55 ----IIDTGGI----EPKSDDIILAQMRRQALIAIETANVIIFIVDGKSGLTDTDREVAQ 106 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 L K S + + K+D + E+ K+ N P I S Sbjct: 107 MLRKSKKSIVLAVNKVDSIKE-------EENKFEFYNLGLGDPVAISASQ 149 Score = 38.1 bits (87), Expect = 0.90, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 11/131 (8%) Query: 31 EIAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 +IA G+ NVGKSSLIN +L +N+ SN PG T+ S L+ + L+ Sbjct: 178 KIAMIGKPNVGKSSLINKLLGEERNI--VSNIPGTTRDAI------DSPLETEIGKFMLI 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + ++R L+ L++D + + D+ + + + Sbjct: 230 DTAGLRRKSKVKEEIERYS--VIRTLTAIERADVCILMLDATEELSEQDEKIIGYAHELN 287 Query: 150 VSYQIVLTKID 160 + +++ K D Sbjct: 288 KAIMVIVNKWD 298 >gi|308234454|ref|ZP_07665191.1| small GTP-binding protein [Atopobium vaginae DSM 15829] gi|328944301|ref|ZP_08241765.1| ribosome-associated GTPase EngA [Atopobium vaginae DSM 15829] gi|327491220|gb|EGF22995.1| ribosome-associated GTPase EngA [Atopobium vaginae DSM 15829] Length = 438 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 9/147 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK IA GR NVGKSSL+N L +R + ++ G T+ + D+ Sbjct: 174 PKDSSVAIAVIGRPNVGKSSLVNKL-SRSQRSLVADYAGTTRDA-IDITFDYKG-----Q 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD G ++V+ + +VR L L+ID G+ + DQ + Sbjct: 227 TIRLVDTAGMRKKTQVHEDVEYYS--MVRGLQAMDKADVCLLVIDAHEGMTEQDQKLAGM 284 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETL 171 + + +VL K D L ++ L Sbjct: 285 AIDRGCALVLVLNKTDLLRDEQDRQKL 311 >gi|270308559|ref|YP_003330617.1| GTP-binding protein [Dehalococcoides sp. VS] gi|270154451|gb|ACZ62289.1| GTP-binding protein [Dehalococcoides sp. VS] Length = 441 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 14/150 (9%) Query: 16 RGVPEIGLLPKAGPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 R + E+ P A P E +A GR+NVGKS+L+N + ++ + SN PG T+ Sbjct: 161 RVLEELPDQPIASPEEDNSVKLALVGRANVGKSTLLNTFLGQER-SIVSNIPGTTRDA-I 218 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 P DF N + L+D G + V+ + ++R L V L++D Sbjct: 219 DTPLDF-----NGTNVLLIDTAGIRRRGKVESGVEKYS--VLRALKAVDRADVVLLVMDT 271 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 V D + ++ A I+L K D Sbjct: 272 EELVTAQDTHIAGYVRDTAKGIIIILNKWD 301 Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P IA GR NVGKS+L+N L + KNLA T + PG T+ F Sbjct: 6 PIIAIVGRQNVGKSTLLNRLAH-KNLAITEDLPGTTRDRLF 45 >gi|95007347|emb|CAJ20567.1| GTP binding protein, putative [Toxoplasma gondii RH] Length = 1060 Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats. Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 10/79 (12%) Query: 16 RGVPEIGLLPKAGPPEI-AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +G E L + PP I G NVGKSS+IN L+ K ++ S PG+T+HL V Sbjct: 642 KGSAEDSALLASPPPFIVGLVGFPNVGKSSVINALLGSKKVS-VSRTPGKTRHLQTLVVG 700 Query: 75 DFSNLKNNLPAMALVDMPG 93 D + L D PG Sbjct: 701 D--------TGLTLCDCPG 711 >gi|227515173|ref|ZP_03945222.1| GTP-binding protein EngA [Lactobacillus fermentum ATCC 14931] gi|227086505|gb|EEI21817.1| GTP-binding protein EngA [Lactobacillus fermentum ATCC 14931] Length = 437 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 16/170 (9%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALVD 90 +F GR NVGKSSL+N ++ +N S+ G T+ F KD +VD Sbjct: 178 SFIGRPNVGKSSLVNAILG-ENRVIVSDMAGTTRDAINTQFTAKDGREF-------TMVD 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +N + + ++R + V ++++ G++++D+ + + + Sbjct: 230 TAGIKKKGKLYENTERYA--LMRSMRAIDDSDVVLVVLNAEEGIRELDKHIAGYAHEAGR 287 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN---YPTAHPEVIPTSSVKRK 197 + IV+ K D + P Q T+ LIR+ Y + P V ++ K++ Sbjct: 288 AVIIVVNKWDTI-PDRDQRTMTDFTNLIRHEFQYLSYAPIVFVSAKTKQR 336 >gi|219129822|ref|XP_002185079.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403574|gb|EEC43526.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 599 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 27/144 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVPKDFS---------- 77 P + G + GK+ L++ + RK + A G TQ + +F K Sbjct: 4 PIVVIMGHVDTGKTKLLDKI--RKTNVQEGEAGGITQQIGATYFEKKTLEQQVSKLNATE 61 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N++ +P M ++D PG+ N+ S G S L++D HG++Q Sbjct: 62 NVELKVPGMLVIDTPGH----ESFTNLRSRGS---------SLCDVAILVVDLMHGLEQQ 108 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDK 161 + + L K+ V + + L K+D+ Sbjct: 109 TIESLTMLRKRGVPFVVALNKVDR 132 >gi|124809006|ref|XP_001348466.1| cytosolic preribosomal GTPase, putative [Plasmodium falciparum 3D7] gi|23497360|gb|AAN36905.1| cytosolic preribosomal GTPase, putative [Plasmodium falciparum 3D7] Length = 833 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 9/62 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G NVGKSS+IN L+ +K ++ S PG+T+H K F +L D Sbjct: 601 IGFIGFPNVGKSSIINCLIGKKKVS-VSRQPGKTKHFQTITLKHF--------PFSLCDC 651 Query: 92 PG 93 PG Sbjct: 652 PG 653 >gi|262273709|ref|ZP_06051522.1| GTP-binding protein Era [Grimontia hollisae CIP 101886] gi|262222124|gb|EEY73436.1| GTP-binding protein Era [Grimontia hollisae CIP 101886] Length = 304 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 28/181 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N LV +K L+ TS P T+H V + ++ A+ VD Sbjct: 13 IAIVGRPNVGKSTLLNRLVGQK-LSITSRKPQTTRHRIMGV-----DTRDGYQAV-YVDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG K+ ++ L+ R S T + V L+D H Q D+ V + L K + Sbjct: 66 PGLHIEE--KRTINR---LMNRAASSSLTDVELVLFLVDGTHWT-QDDEMVLNKLKKAQL 119 Query: 151 SYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +++ K+D + QE +K ++ +V+P S+ I+V+ K Sbjct: 120 PTVLLVNKVDNVKEKGELFPHLQEISQKMDFI---------DVVPVSAKHGTNIDVVEKL 170 Query: 206 I 206 + Sbjct: 171 V 171 >gi|184155357|ref|YP_001843697.1| GTP-binding protein EngA [Lactobacillus fermentum IFO 3956] gi|238692974|sp|B2GC35|DER_LACF3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|183226701|dbj|BAG27217.1| GTP-binding protein [Lactobacillus fermentum IFO 3956] Length = 437 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 16/170 (9%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALVD 90 +F GR NVGKSSL+N ++ +N S+ G T+ F KD +VD Sbjct: 178 SFIGRPNVGKSSLVNAILG-ENRVIVSDMAGTTRDAINTQFTAKDGREF-------TMVD 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +N + + ++R + V ++++ G++++D+ + + + Sbjct: 230 TAGIKKKGKLYENTERYA--LMRSMRAIDDSDVVLVVLNAEEGIRELDKHIAGYAHEAGR 287 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN---YPTAHPEVIPTSSVKRK 197 + IV+ K D + P Q T+ LIR+ Y + P V ++ K++ Sbjct: 288 AVIIVVNKWDTI-PDRDQRTMTDFTNLIRHEFQYLSYAPIVFVSAKTKQR 336 >gi|197117132|ref|YP_002137559.1| GTP-binding protein EngA [Geobacter bemidjiensis Bem] gi|238690874|sp|B5EE25|DER_GEOBB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|197086492|gb|ACH37763.1| GTPase EngA [Geobacter bemidjiensis Bem] Length = 440 Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 25/138 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N LV R+ A + PG T+ N+ F ++P + LV Sbjct: 3 PIIAIVGRPNVGKSTLFNRLVGRRK-AMVDDMPGVTRDRNYAEVNRF-----DVPFI-LV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G+ + + +++ + E+S + ++D R G+ D+DV Sbjct: 56 DTGGFEPETSDR---------LLQQMREQSRFAMDEADLILFIMDARGGLTPADRDVVDM 106 Query: 145 LDK--KAVSYQIVLTKID 160 L + K V Y ++ K+D Sbjct: 107 LRRINKPVFY--IINKVD 122 >gi|87309243|ref|ZP_01091379.1| translation initiation factor [Blastopirellula marina DSM 3645] gi|87287882|gb|EAQ79780.1| translation initiation factor [Blastopirellula marina DSM 3645] Length = 960 Score = 40.8 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 32/187 (17%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMA 87 PP + F G + GK+SL++ ++ N+A + A G TQH+ + V KD + A Sbjct: 452 PPVVTFLGHVDHGKTSLMDRIIGH-NVA-SGEAGGITQHIRAYIVDKDDKKI-------A 502 Query: 88 LVDMPG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD PG + RA NV L+I G+ ++ S Sbjct: 503 FVDTPGHEAFTEMRARGANVTD----------------IAVLIIAADDGIMPQTEEAISH 546 Query: 145 LDKKAVSYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 V + L KID +P A + L + L + EV+ TS+V +GI+ L Sbjct: 547 AKAAEVPIIVALNKIDLPGANPDKAMQQLSQHGLLPTEW-GGDVEVVKTSAVSGEGIDAL 605 Query: 203 RKAILET 209 + IL T Sbjct: 606 LETILLT 612 >gi|288819136|ref|YP_003433484.1| tRNA modification GTPase [Hydrogenobacter thermophilus TK-6] gi|288788536|dbj|BAI70283.1| tRNA modification GTPase [Hydrogenobacter thermophilus TK-6] gi|308752720|gb|ADO46203.1| tRNA modification GTPase TrmE [Hydrogenobacter thermophilus TK-6] Length = 450 Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 34/183 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 +A G+ NVGKSSL N L+ R+ A + PG T +DF + + ++ + L+ Sbjct: 221 LAIVGKPNVGKSSLFNALLGRER-AIVTEVPGTT--------RDFLSEELHMEGVPINLI 271 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R + V+S G + R + ++ V ++D +++ D DV++ + ++ Sbjct: 272 DTAGI---RETEDVVESIG--VKRSIDSINSADMVLFVVDASKPLEKDDWDVYNLVKQR- 325 Query: 150 VSYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + VL K+D L P+ A+ P+ + S+ G++ L+K +LE Sbjct: 326 -DHIKVLNKVDLGLDPSIAK---------------IFPDGVRVSAKMGDGMQDLKKVMLE 369 Query: 209 TIN 211 + Sbjct: 370 KLG 372 >gi|312869092|ref|ZP_07729266.1| ribosome biogenesis GTPase Der [Lactobacillus oris PB013-T2-3] gi|311095338|gb|EFQ53608.1| ribosome biogenesis GTPase Der [Lactobacillus oris PB013-T2-3] Length = 437 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 18/173 (10%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMA 87 I FS GR NVGKSSL+N ++ +N SN G T+ FV KD Sbjct: 175 IRFSLIGRPNVGKSSLVNGILG-ENRVIVSNMAGTTRDAINTRFVAKDGQEF-------T 226 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G +N + + ++R + V ++++ G+++ID+ + + + Sbjct: 227 MIDTAGIRKQGKIYENTERYA--LMRAMRAIDGSDVVLVVLNAEEGIREIDKHIAGYAHE 284 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN---YPTAHPEVIPTSSVKRK 197 IV+ K D L Q T+ LIR+ Y + P + ++ K++ Sbjct: 285 AGCGVIIVVNKWDTLEERD-QRTMTDFTNLIRHEFQYLSYAPIIFVSAKTKQR 336 >gi|229822882|ref|ZP_04448952.1| hypothetical protein GCWU000282_00172 [Catonella morbi ATCC 51271] gi|229787695|gb|EEP23809.1| hypothetical protein GCWU000282_00172 [Catonella morbi ATCC 51271] Length = 437 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 14/153 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + F GR NVGKSSL+N ++ + + SN G T+ V F++ + M +D Sbjct: 177 KFCFIGRPNVGKSSLVNAILKEERVI-VSNIEGTTREA---VDTHFTDEEGTRYTM--ID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +N + + L ERS + C L++D G+++ D+ V + + Sbjct: 231 TAGIRKRGKVYENTEKYSVLRAMSAIERSDIVC--LVLDAETGIREQDKKVAGYAYEAGK 288 Query: 151 SYQIVLT------KIDKLSPTTAQETLEKTKYL 177 I++ K DKL T +E +YL Sbjct: 289 GMVILVNKWDAVDKSDKLFETFTKEIRAHFQYL 321 >gi|218887353|ref|YP_002436674.1| GTP-binding protein EngA [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758307|gb|ACL09206.1| small GTP-binding protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 506 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 21/187 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA GR NVGKS+L N L+ R N A T + PG T+ + + S K A+V Sbjct: 18 PKIALVGRPNVGKSTLFNRLI-RANRAITHDRPGVTR--DRMEGQVRSRGKQTF---AIV 71 Query: 90 DMPG------YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 D G A P+ ++ + + + + L++D R G+ D+ + + Sbjct: 72 DTGGITLDAHAAVAEGPEGIRGFEAEILRQAEAAMAEAAGICLVVDGRDGLTPFDEHLAA 131 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + +V+ K+D +E+ ++ + ++P S+ + VL Sbjct: 132 HLRRAGKPVLVVVNKVD---------GVEREDEMLAEFHALGFPLLPVSAAHGHNVRVLE 182 Query: 204 KAILETI 210 + E + Sbjct: 183 DEMREML 189 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 15/139 (10%) Query: 28 GPP------EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 GPP +A GR N GKSSL+N L ++ + S+ G T+ D S ++ Sbjct: 235 GPPYDPTHLRLAMLGRPNAGKSSLVNALTGQQRMI-VSDMAGTTRD-----SVDVS-FES 287 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD G +V+ + + L + L++D GV Q D+ + Sbjct: 288 GDKTITFVDTAGVRRRSRITDSVERYS--VNASLKSTTKAHVTLLVLDALQGVTQQDKRL 345 Query: 142 FSFLDKKAVSYQIVLTKID 160 LD++ + +++ KID Sbjct: 346 VDLLDERKTPFMVLVNKID 364 >gi|212550616|ref|YP_002308933.1| tRNA modification GTPase TrmE [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548854|dbj|BAG83522.1| tRNA modification GTPase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 464 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 27/192 (14%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P + G +NVGKS+L+N L+N + A S G T+ + +D N+ Sbjct: 215 LGNAIKNGIP-VVIIGETNVGKSTLLNHLLNEEK-AIVSEIHGTTRD----IIEDVINIS 268 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ- 139 A +D G R K ++ G I R + V +ID K+I Sbjct: 269 G--IAFRFIDTAGI---RNTKNEIELLG--IERTYQKIKKASIVIWMIDATKFNKEIKHI 321 Query: 140 -DVFS--FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D S +DKK + ++ KIDKL+ + K +L + P E I S+ + Sbjct: 322 ADRISPLIMDKKLI---VIFNKIDKLNHS-------KQFFLKKKLPHISAEYICLSAKYK 371 Query: 197 KGIEVLRKAILE 208 + ++L K +LE Sbjct: 372 RNTDILEKTLLE 383 >gi|255525312|ref|ZP_05392252.1| GTP-binding protein Era [Clostridium carboxidivorans P7] gi|296188181|ref|ZP_06856573.1| GTP-binding protein Era [Clostridium carboxidivorans P7] gi|255510984|gb|EET87284.1| GTP-binding protein Era [Clostridium carboxidivorans P7] gi|296047307|gb|EFG86749.1| GTP-binding protein Era [Clostridium carboxidivorans P7] Length = 293 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 27/185 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 I GR NVGKS+L+N ++ K L+ S P T++ KDF + V Sbjct: 7 ITIIGRPNVGKSTLLNSIMGEK-LSIVSCKPQTTRNNIQTILTEKDFQ--------LVFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG PK + G +V+ + + + L + + + D + L + Sbjct: 58 DTPG---IHKPKHKL---GEFMVKIAQDSIKEVDLILFLTNPEDEIGKGDMYILEQLKEC 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAI 206 V +VL KID+ QE + KT + NY + E+IP S++K K ++ L++ + Sbjct: 112 NVPVFLVLNKIDE----NTQERVAKT---LDNYSKVFSFAEIIPISALKGKNVDELKELM 164 Query: 207 LETIN 211 ++ ++ Sbjct: 165 VKYMH 169 >gi|121607080|ref|YP_994887.1| GTP-binding protein EngA [Verminephrobacter eiseniae EF01-2] gi|166225932|sp|A1WE12|DER_VEREI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|121551720|gb|ABM55869.1| small GTP-binding protein [Verminephrobacter eiseniae EF01-2] Length = 468 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 15/180 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR NVGKS+LIN + + L + PG T+ VP + + + L A + Sbjct: 201 LAVAGRPNVGKSTLINTWLGEERLV-AFDTPGTTRD-AITVPFERNGQRFELVDTAGLRR 258 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G +A K +V V+ L + V LL+D GV + D + ++ + + Sbjct: 259 KGKVFAAVEKFSV-------VKTLQAIESAHVVLLLLDASQGVTEQDAHIAGYILESGRA 311 Query: 152 YQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K D Q E +T+ + + H S+ KR+G+ L AI++ Sbjct: 312 VVLAVNKWDATDDYQRQLLERSIETRLAFLKFASLH----RISAKKRQGLGPLWTAIVQA 367 >gi|90410730|ref|ZP_01218745.1| Hypothetical selenocysteine-specific translation elongation factor [Photobacterium profundum 3TCK] gi|90328361|gb|EAS44659.1| Hypothetical selenocysteine-specific translation elongation factor [Photobacterium profundum 3TCK] Length = 616 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 23/183 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I +G + GK++LI L G TQ L F F + N + ++D+ Sbjct: 15 IGLAGHVDHGKTALIEALTGIVTARPHEQVLGMTQDLGF---AHFQDDHGN--TIGVIDV 69 Query: 92 PGYG-YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH--GVKQIDQDVFSFLDKK 148 PG+ Y R V LI+ ++ + + H G+++I Sbjct: 70 PGHERYLRNMVAGVWHLNALILVVAADEGWMPMTTSHVQVAHAMGIEEI----------- 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K DK+SP E E+ + PE+I S++++ I LR+ ++E Sbjct: 119 ----ILCINKRDKVSPERLSEVEEQALENVMEMTDLVPELISVSALQQDNISALRRLVIE 174 Query: 209 TIN 211 TI Sbjct: 175 TIT 177 >gi|89897898|ref|YP_515008.1| GTP-binding protein EngA [Chlamydophila felis Fe/C-56] gi|123483923|sp|Q256C5|DER_CHLFF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|89331270|dbj|BAE80863.1| GTP-binding GTPase [Chlamydophila felis Fe/C-56] Length = 475 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 17/136 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL--KNNLPAM 86 P +IA GR NVGKSS+IN L+N + N PG T +D ++ +N + Sbjct: 212 PLKIALIGRPNVGKSSIINGLLNEERCI-IDNIPGTT--------RDNVDILYSHNDRSY 262 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSF 144 +D G ++ K +++ W I +E++ R L+ID H + D+ + S Sbjct: 263 LFIDTAGLRKMKSVKNSIE-W---ISSSRTEKAIARADICLLVIDATHCLSSYDKRILSL 318 Query: 145 LDKKAVSYQIVLTKID 160 + K + I+ K D Sbjct: 319 ISKHKKPHIILANKWD 334 >gi|325915828|ref|ZP_08178127.1| GTP-binding protein Era [Xanthomonas vesicatoria ATCC 35937] gi|325537949|gb|EGD09646.1| GTP-binding protein Era [Xanthomonas vesicatoria ATCC 35937] Length = 299 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 24/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 +A GR NVGKS+L N LV K ++ SN P T+H + P +ALV Sbjct: 12 VAVIGRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIA--------TFPEGQLALV 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF--LDK 147 D PG R K+ ++ V + R +L V + + ++D +F L Sbjct: 63 DTPGL--HREQKRAMNR-----VMNRAARGSLEGVDAAVLVIEAGRWDEEDTLAFRVLSD 115 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V +V+ K+D+L TA R + HP S++KRKG+E L +L Sbjct: 116 AEVPVVLVVNKVDRLKDKTALFPFLAQVSEGRTFAAVHP----VSALKRKGLEALVSDLL 171 Query: 208 ETI 210 + + Sbjct: 172 KLV 174 >gi|218288620|ref|ZP_03492897.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1] gi|218241277|gb|EED08452.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1] Length = 298 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A SN P T++ V ++ M +D Sbjct: 8 VALIGRPNVGKSTLLNALVGQK-VAIMSNRPQTTRNRIRGVRTTETS------QMIFIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ L + + + L++D V ++++ L++ Sbjct: 61 PGI---HKPKHRLGEY--MVDAALKTLNEVDVIVLVVDASSPVHPTEEEIAKQLERVRTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 + L K+D L L++ I Y P E +P S++K + +++L + I Sbjct: 116 VILALNKVDALDDRAL--VLKR----IEEYQALRPFEEYVPISALKGEQVDLLAELI 166 >gi|207109543|ref|ZP_03243705.1| GTPase EngB [Helicobacter pylori HPKX_438_CA4C1] Length = 63 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Query: 53 KNLARTSNAPGRTQHLNFFVPKDFSNLKNNL-PAMALVDMPGYGYARAPKKNVDSW 107 KNLA++S PG+T+ NFF + + +N L ++D+PG+GYA+ K W Sbjct: 1 KNLAKSSATPGKTRLANFFSTT-WEDKENALTTTFNVIDLPGFGYAKVSKSLKKEW 55 >gi|111221687|ref|YP_712481.1| GTP-binding protein EngA [Frankia alni ACN14a] gi|111149219|emb|CAJ60904.1| GTP-binding protein [Frankia alni ACN14a] Length = 502 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 23/152 (15%) Query: 17 GVPEIG---LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 G E+G L P G P +A GR NVGKS+L+N ++ R+ A + PG T+ + Sbjct: 46 GADELGADELGPVTGQPVVAVVGRPNVGKSTLVNRILGRR-AAVVEDVPGVTRDRIAY-- 102 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS----TLRCVYLLID 129 + N LVD G+ P + GL + + S T V ++D Sbjct: 103 ----DAVWNGRRFTLVDTGGW----EPDAS-----GLAAQVSEQASAALDTADAVLFIVD 149 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 G D+ V L + + +V K+D Sbjct: 150 VTTGATDADEAVARVLHRSGLPVILVANKVDD 181 >gi|125972566|ref|YP_001036476.1| small GTP-binding protein [Clostridium thermocellum ATCC 27405] gi|256005128|ref|ZP_05430097.1| small GTP-binding protein [Clostridium thermocellum DSM 2360] gi|281416754|ref|ZP_06247774.1| small GTP-binding protein [Clostridium thermocellum JW20] gi|125712791|gb|ABN51283.1| iron-only hydrogenase maturation protein HydF [Clostridium thermocellum ATCC 27405] gi|255990875|gb|EEU00988.1| small GTP-binding protein [Clostridium thermocellum DSM 2360] gi|281408156|gb|EFB38414.1| small GTP-binding protein [Clostridium thermocellum JW20] gi|316941196|gb|ADU75230.1| small GTP-binding protein [Clostridium thermocellum DSM 1313] Length = 400 Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 59/140 (42%), Gaps = 20/140 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I F G+ N GKSS++N V +NLA S+ G T V K L L Sbjct: 7 PSANRLHIGFFGKRNAGKSSVVN-AVTGQNLAIVSDVKGTTTDP---VYKAMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLR---CVYLLIDCRHGVKQIDQD 140 + ++D PG +D G L +R R L L+ID G + D+ Sbjct: 61 PVVIIDTPG----------IDDEGTLGEMRVKRSRQVLNKTDIAVLVIDATCGKSEDDEK 110 Query: 141 VFSFLDKKAVSYQIVLTKID 160 + +KK + Y +V K D Sbjct: 111 LIELFEKKDIKYVVVYNKAD 130 >gi|156383854|ref|XP_001633047.1| predicted protein [Nematostella vectensis] gi|156220112|gb|EDO40984.1| predicted protein [Nematostella vectensis] Length = 624 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + LP+ I G NVGKSS IN ++ K +A S+ PGRT+H F L+ Sbjct: 361 VADLPEDALTTIGLVGYPNVGKSSTINTILQSKKVA-VSSTPGRTKH--------FQTLQ 411 Query: 81 NNLPAMALVDMPG 93 + P + L D PG Sbjct: 412 LS-PTVCLCDCPG 423 >gi|156378015|ref|XP_001630940.1| predicted protein [Nematostella vectensis] gi|156217971|gb|EDO38877.1| predicted protein [Nematostella vectensis] Length = 429 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 12/81 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + F G +NVGKSSL+N LV +K + S PG T+H F+ P++ L D Sbjct: 182 LGFVGHTNVGKSSLLNGLVGKK-VVSVSRTPGHTKHFQTIFL----------TPSVRLCD 230 Query: 91 MPGYGYARAPKKNVDSWGGLI 111 PG + K + GL Sbjct: 231 CPGLVFPSLVDKQLQILSGLF 251 >gi|149913922|ref|ZP_01902454.1| Small GTP-binding protein domain [Roseobacter sp. AzwK-3b] gi|149812206|gb|EDM72037.1| Small GTP-binding protein domain [Roseobacter sp. AzwK-3b] Length = 495 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 17/121 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV K LA + PG T+ L K +L+ ++D Sbjct: 5 LAIVGRPNVGKSTLFNRLVG-KRLALVDDQPGVTRDLREGEAK-LGDLR-----FTVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDKK 148 G A +S G + R L+ER+ C++L ID R GV D+ + L K+ Sbjct: 58 AGLEEA-----TDESLQGRM-RKLTERAVDMADVCLFL-IDARAGVTPTDEVLAEILRKR 110 Query: 149 A 149 A Sbjct: 111 A 111 >gi|307610240|emb|CBW99801.1| hypothetical protein LPW_15641 [Legionella pneumophila 130b] Length = 462 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + ++ A ++ PG T+ + + + ++ + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRITKTQD-ALVADFPGLTR------DRQYGHAQHENKSFIIV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G + S + L+E + + L+D R G+ IDQ + L K Sbjct: 56 DTGGIGVDDIEVDTLMSRQSQVA--LNEAN---VILFLVDGRSGLTGIDQQIAQALRKLN 110 Query: 150 VSYQIVLTKIDKLSPTTA 167 +V+ K D ++ A Sbjct: 111 KKVHLVVNKTDGINEDIA 128 Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 13/145 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IAF+GR NVGKS+LIN ++ + + + PG T+ + +P L+D Sbjct: 176 KIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRD-SISIP-----FTREDKQYVLID 228 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +++ L LL+D G+ D ++ F+ + Sbjct: 229 TAGVRRKSRIDEKIEKFS--VIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGK 286 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTK 175 + I + K D L +E EK K Sbjct: 287 ALVIAVNKWDGLE----EEHKEKIK 307 >gi|315282359|ref|ZP_07870786.1| GTP-binding protein Era [Listeria marthii FSL S4-120] gi|313613991|gb|EFR87708.1| GTP-binding protein Era [Listeria marthii FSL S4-120] Length = 301 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ L+ + +Y +ID G + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +++ KID ++P + +E+ + L+ E+IP S+++ Sbjct: 117 PVFLLINKIDLIAPEDLFKLIEQYRELM-----DFEEIIPISALQ 156 >gi|302380500|ref|ZP_07268965.1| GTP-binding protein Era [Finegoldia magna ACS-171-V-Col3] gi|302311443|gb|EFK93459.1| GTP-binding protein Era [Finegoldia magna ACS-171-V-Col3] Length = 294 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 23/172 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GRSNVGKS+L+N ++ K L S+ P T++ + D N+ A+ L D Sbjct: 7 VSVIGRSNVGKSTLLNRVLGEK-LTIISDKPQTTRNKIQLIYTD-----ENMQAIFL-DT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + PK + + ++ +S + + + ++D + ++D ++ L + V+ Sbjct: 60 PG---IQTPKNKLGDY--MLKVSMSTLNEVDVITYIVDTTEEIGKLDSEIIEKL--RLVN 112 Query: 152 YQIVL--TKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIE 200 +I+L KIDK++ E +E TK I ++IP S++ IE Sbjct: 113 TKIILLINKIDKIASDKVNELVEMYTKVGI------FEQIIPISALNGDNIE 158 >gi|326791151|ref|YP_004308972.1| GTP-binding protein Era [Clostridium lentocellum DSM 5427] gi|326541915|gb|ADZ83774.1| GTP-binding protein Era [Clostridium lentocellum DSM 5427] Length = 302 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 21/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N L+ K +A SN P T++ + + L +D Sbjct: 10 VSIIGRPNVGKSTLMNKLIGEK-VAIMSNKPQTTRN------RIQTVLTTKHYQAVFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ ++ + + ++ L++ + + DQ++ L Sbjct: 63 PG---IHTPKNKLGEF--MVKSAMTTLNEVDAIFYLVEAEPFIGKTDQEIIERLKGIQTP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 + + KID + +ET+ KT I Y A+ E+IP S+ + ++ + K + Sbjct: 118 VFLCINKID----SVPRETVLKT---IETYREAYDFKEIIPISAYENTNVDAILKCM 167 >gi|217977174|ref|YP_002361321.1| GTP-binding protein Era [Methylocella silvestris BL2] gi|217502550|gb|ACK49959.1| GTP-binding protein Era [Methylocella silvestris BL2] Length = 310 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 32/143 (22%) Query: 32 IAFSGRSNVGKSSLINILVNRK-NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +A G N GKS+LIN LV K ++ R Q + D + VD Sbjct: 21 VALIGAPNAGKSTLINQLVGAKVSIVSRKAQTTRAQVRGIAIEGDAQ--------IIFVD 72 Query: 91 MPGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 PG AP++ +D +WGG V LL+D R G +D+DV + Sbjct: 73 TPGI---FAPRRRLDRAMVTSAWGGA--------GDADAVALLVDARKG---LDEDVEAI 118 Query: 145 LDKKA---VSYQIVLTKIDKLSP 164 L + A + +V+ KID + P Sbjct: 119 LARLADVRAAKILVINKIDTVEP 141 >gi|52841771|ref|YP_095570.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81823403|sp|Q5ZV99|DER_LEGPH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|52628882|gb|AAU27623.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 462 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + ++ A ++ PG T+ + + + ++ + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRITKTQD-ALVADFPGLTR------DRQYGHAQHENKSFIIV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G + S + L+E + + L+D R G+ IDQ + L K Sbjct: 56 DTGGIGVDDIEVDTLMSRQSQVA--LNEAN---VILFLVDGRSGLTGIDQQIAQALRKFN 110 Query: 150 VSYQIVLTKIDKLSPTTA 167 +V+ K D ++ A Sbjct: 111 KKVHLVVNKTDGMNEDIA 128 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 9/133 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IAF+GR NVGKS+LIN ++ + + + PG T+ + +P L+D Sbjct: 176 KIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRD-SISIP-----FTREDKQYVLID 228 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +++ L LL+D G+ D ++ F+ + Sbjct: 229 TAGVRRKSRIDEKIEKFS--VIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGK 286 Query: 151 SYQIVLTKIDKLS 163 + I + K D L Sbjct: 287 ALVIAVNKWDGLE 299 >gi|86134521|ref|ZP_01053103.1| GTP-binding protein EngA [Polaribacter sp. MED152] gi|85821384|gb|EAQ42531.1| GTP-binding protein EngA [Polaribacter sp. MED152] Length = 436 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 28/176 (15%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVP 73 PE L K P A GR N GKSS IN L+ N+A T+ T++ F Sbjct: 166 PEEVDLEKKELPRFAVVGRPNAGKSSFINALIGEDRNIVTNIAGTTRDSIDTKYNRFGF- 224 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 DF+ LVD G K++++ + ++R + + L+ID G Sbjct: 225 -DFN----------LVDTAGIRKKSRVKEDLEFYS--VMRAVRSIEYSDVIILVIDATRG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + DQ++F +K I++ K D +EK +R+Y E I Sbjct: 272 FEGQDQNIFWLAEKNRKGVVILINKWD---------LVEKETNTMRDYEAKVKEQI 318 >gi|332886080|gb|EGK06324.1| tRNA modification GTPase TrmE [Dysgonomonas mossii DSM 22836] Length = 463 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 27/195 (13%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 IG K+G P +A G +N GKS+L+N+L++ + A S+ G T+ V +D N++ Sbjct: 214 IGNAVKSGIP-VAIIGETNAGKSTLLNLLLHEEK-AIVSDIHGTTRD----VIEDTINIQ 267 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR---HGVKQI 137 L+D G R ++S G I R + V + DC ++++ Sbjct: 268 G--LTFRLIDTAGI---RDTHDEIESLG--IERTFKKIEQANIVLWVADCETINEHIEEL 320 Query: 138 DQDVFSFL-DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 Q + + D+K V +V K+D +S A+ EK K L+ PE + S+ Sbjct: 321 SQKILPVVGDRKLV---LVFNKVDIIS---AERKAEKEKLLLDKI----PERVFISAKYE 370 Query: 197 KGIEVLRKAILETIN 211 +G L +++T N Sbjct: 371 QGTNQLEDLLVKTAN 385 >gi|296391635|ref|ZP_06881110.1| selenocysteine-specific elongation factor [Pseudomonas aeruginosa PAb1] Length = 641 Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +G + GK+SL+ L + R + G T L + +++L + P +D Sbjct: 3 VGTAGHIDHGKTSLLRALTGIEGDRRPAERQRGITIDLGYL----YADLGDGSPT-GFID 57 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ + L+ S + CV L++ G+ ++ + ++ + Sbjct: 58 VPGHER-------------FVHNMLAGASGIDCVLLVVAADDGLMPQTREHLAIVELLGI 104 Query: 151 SYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V LTKID++ P Q+ + ++L+ + P A + P SS +G+ LR+A+ Sbjct: 105 RRALVALTKIDRVEPQRVQQVQTQVEHLLASGPLARSPIFPLSSSTGEGVAALREAL 161 >gi|325678850|ref|ZP_08158448.1| hydrogenase maturation GTPase HydF [Ruminococcus albus 8] gi|324109354|gb|EGC03572.1| hydrogenase maturation GTPase HydF [Ruminococcus albus 8] Length = 396 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 70/181 (38%), Gaps = 40/181 (22%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GR N GKSS++N N++ LA S+ PG T + K L P M ++D Sbjct: 14 IGFFGRRNAGKSSVVNAFTNQE-LAIVSDTPGTTTDPVY---KAMELLPMG-PVM-IIDT 67 Query: 92 PGY------GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PGY G R KK V G C L+ DC + ++ + Sbjct: 68 PGYDDEGELGELRV-KKTVQVLG-----------KTDCAVLVTDCTRELDDSEKQLTELF 115 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K + Y I K D L+ + P A I S++ + I LR+ Sbjct: 116 VQKKIPYIIAKNKSD----------------LLESVPQAGSNEIYVSALNKTNINELREL 159 Query: 206 I 206 + Sbjct: 160 V 160 >gi|317131054|ref|YP_004090368.1| small GTP-binding protein [Ethanoligenens harbinense YUAN-3] gi|315469033|gb|ADU25637.1| small GTP-binding protein [Ethanoligenens harbinense YUAN-3] Length = 414 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 62/146 (42%), Gaps = 16/146 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A IAF GR N GKSSL+N + + +A TS+ PG T V K L L Sbjct: 5 PIANRTHIAFFGRRNAGKSSLLNAIAGQP-VAVTSDVPGTTTDP---VHKTMEILP--LG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + L D G + GGL V Y R T V L+ D GV + Sbjct: 59 PVLLTDTAGL-------DDTGELGGLRVEKAYEELRRTDLAV-LVADAADGVGNFETAFI 110 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQ 168 L K+ V + +VL K D + +T + Sbjct: 111 GELRKRRVPFVVVLNKCDTHAVSTDE 136 >gi|222099201|ref|YP_002533769.1| Small GTP-binding protein [Thermotoga neapolitana DSM 4359] gi|221571591|gb|ACM22403.1| Small GTP-binding protein [Thermotoga neapolitana DSM 4359] Length = 439 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 36/195 (18%) Query: 24 LPKAGPPE-IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 LP AG I +GR NVGKSS +N LV +N++ S+ G T P S + Sbjct: 38 LPDAGFRRYIVVAGRRNVGKSSFMNALVG-QNVSIVSDYAGTTTD-----PVYKSMELHP 91 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID---- 138 + + LVD PG +V G L V R V+ DC G+ D Sbjct: 92 IGPVTLVDTPGL-------DDVGELGRLRV------EKARRVFYRADC--GILVTDSAPT 136 Query: 139 ---QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 DV + + + + +V+ KID L E E+ K L + A +V+ S+++ Sbjct: 137 PYEDDVVNLFKEMEIPFVVVVNKIDVLG-----EKAEELKGLYESRYEA--KVLLVSALQ 189 Query: 196 RKGIEVLRKAILETI 210 +KG + + K I E + Sbjct: 190 KKGFDDIGKTISEIL 204 >gi|54294416|ref|YP_126831.1| GTP-binding protein EngA [Legionella pneumophila str. Lens] gi|81822385|sp|Q5WWG8|DER_LEGPL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|53754248|emb|CAH15725.1| hypothetical protein lpl1485 [Legionella pneumophila str. Lens] Length = 462 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + ++ A ++ PG T+ + + + ++ + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRITKTQD-ALVADFPGLTR------DRQYGHAQHENKSFIIV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G G VD+ +S++S + + L+D R G+ IDQ + Sbjct: 56 DTGGIG---VDDIEVDTL-------MSKQSQVALNEANVILFLVDGRSGLTGIDQQIAQA 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L K +V+ K D ++ A Sbjct: 106 LRKLNKKVHLVVNKTDGINEDIA 128 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 13/145 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IAF+GR NVGKS+LIN ++ + + + PG T+ + +P L+D Sbjct: 176 KIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRD-SISIP-----FTREDKQYVLID 228 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +++ L LL+D G+ D ++ F+ + Sbjct: 229 TAGVRRKSRIDEKIEKFS--VIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFIIESGK 286 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTK 175 + I + K D L +E EK K Sbjct: 287 ALVIAVNKWDGLE----EEHKEKIK 307 >gi|217964392|ref|YP_002350070.1| GTP-binding protein Era [Listeria monocytogenes HCC23] gi|290894223|ref|ZP_06557192.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-071] gi|254783659|sp|B8DE49|ERA_LISMH RecName: Full=GTPase Era gi|217333662|gb|ACK39456.1| GTP-binding protein Era [Listeria monocytogenes HCC23] gi|290556220|gb|EFD89765.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-071] gi|307571043|emb|CAR84222.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L99] Length = 301 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ L+ + +Y +ID G + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +++ KID ++P + +E+ + L+ E+IP S+++ Sbjct: 117 PVFLLINKIDLIAPEDLFKLIEQYRDLME-----FDEIIPISALQ 156 >gi|169824433|ref|YP_001692044.1| GTP-binding protein [Finegoldia magna ATCC 29328] gi|167831238|dbj|BAG08154.1| GTP-binding protein [Finegoldia magna ATCC 29328] Length = 294 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 23/172 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GRSNVGKS+L+N ++ K L S+ P T++ + D N+ A+ L D Sbjct: 7 VSVIGRSNVGKSTLLNRVLGEK-LTIISDKPQTTRNKIQLIYTD-----ENMQAIFL-DT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + PK + + ++ +S + + + ++D + ++D ++ L + V+ Sbjct: 60 PG---IQTPKNKLGDY--MLKVSMSTLNEVDVITYIVDTTEEIGKLDSEIIEKL--RLVN 112 Query: 152 YQIVL--TKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIE 200 +I+L KIDK++ E +E TK I ++IP S++ IE Sbjct: 113 TKIILLINKIDKIASDKVNELVEMYTKVGI------FEQIIPISALNGDNIE 158 >gi|33863726|ref|NP_895286.1| hypothetical protein PMT1459 [Prochlorococcus marinus str. MIT 9313] gi|33635309|emb|CAE21634.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT 9313] Length = 441 Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 4/62 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR VGKSSL+N L+ +N+ T A G T+H D+ NNL ++ LVD Sbjct: 54 IAVFGRVGVGKSSLLNALLG-QNIFATDVAHGCTRHQQAV---DWCQPINNLDSVELVDT 109 Query: 92 PG 93 PG Sbjct: 110 PG 111 >gi|325068743|ref|ZP_08127416.1| GTP-binding protein Der [Actinomyces oris K20] Length = 533 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 21/183 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L+N ++ R+ A + PG T+ + P +++ + Sbjct: 95 GLPVLAVVGRPNVGKSTLVNRVLGRRE-AVVQDTPGVTRDRVSY-PAEWAGRR-----FT 147 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G+ A + I +++ V L++D + G+ + D V L + Sbjct: 148 IVDTGGWEVDVAGLDAAVATQAEIAVEMAD-----AVLLVVDAQVGITETDARVVRMLRR 202 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + K+D SP AQE T + N P P S++ +G + A++ Sbjct: 203 SGKPVVLAANKVD--SP--AQEGDAATLW---NLGLGEP--FPVSALHGRGSGEVLDAVM 253 Query: 208 ETI 210 E + Sbjct: 254 EVL 256 >gi|291571683|dbj|BAI93955.1| tRNA modification GTPase [Arthrospira platensis NIES-39] Length = 469 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 19/181 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ + + + +P L D Sbjct: 228 VAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-DT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G + R + V +DC G + + +++ + + + Sbjct: 281 AGI---RKSDDKVEQIG--VERSQIAAQSADLVLFTLDCEKGWTEGENEIYQQVKNRPII 335 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVKRKGIEVLRKAILETI 210 +V+ K D+LS +AQ LE + I N P +I T++ +GI L +IL + Sbjct: 336 --VVMNKSDRLS--SAQ--LENLRQAIINQLDIKPSLIIATAATLNQGITDLETSILNAV 389 Query: 211 N 211 + Sbjct: 390 H 390 >gi|170725905|ref|YP_001759931.1| GTP-binding protein EngA [Shewanella woodyi ATCC 51908] gi|238688689|sp|B1KLB1|DER_SHEWM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169811252|gb|ACA85836.1| small GTP-binding protein [Shewanella woodyi ATCC 51908] Length = 488 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADYPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 + GY + +D I +++E+S V L D R G+ DQ + Sbjct: 46 HLSGYEFIVVDTGGIDGTEEGIETHMAEQSMAAIEEADVVLFLTDARAGLTAADQAISEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L ++ + +V K+D + +A Sbjct: 106 LRRREKTTFVVANKVDGIDADSA 128 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 30/135 (22%), Positives = 61/135 (45%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + +APG T+ + ++P ++ + L Sbjct: 199 PIKLAVIGKPNVGKSTLTNRILGEERVV-VYDAPGTTRD-SIYIP-----MERDGREYVL 251 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L++D R G+ + D + F Sbjct: 252 IDTAGVRRRSKVNETVEKFS--VIKTLKAVEDCNVVLLIVDAREGIAEQDLGLLGFALNA 309 Query: 149 AVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 310 GRALVIAVNKWDGID 324 >gi|320539280|ref|ZP_08038950.1| ribosome-associated GTPase [Serratia symbiotica str. Tucson] gi|320030672|gb|EFW12681.1| ribosome-associated GTPase [Serratia symbiotica str. Tucson] Length = 495 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 12/151 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ ++A GR NVGKS+L N ++ + + + PG T+ + ++P + + Sbjct: 203 PQDLAIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MVRDER 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 256 EYVLIDTAGVRKHGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDRDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSP---TTAQETLE 172 + S IV+ K D +S T +E L+ Sbjct: 314 ILNSGRSLVIVVNKWDGMSEEERTHVKEMLD 344 >gi|239815182|ref|YP_002944092.1| GTP-binding protein EngA [Variovorax paradoxus S110] gi|259645888|sp|C5CXH0|DER_VARPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|239801759|gb|ACS18826.1| small GTP-binding protein [Variovorax paradoxus S110] Length = 447 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 17/184 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A +GR NVGKS+LIN + + L + PG T+ VP + N L Sbjct: 180 PIKLAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRDA-ISVP-----FERNGQRFEL 232 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L + V LL+D GV D + ++ + Sbjct: 233 IDTAGLRRKGKVFEAIEKFS--VVKTLQAIESASVVLLLLDATQGVTDQDAHIAGYILES 290 Query: 149 AVSYQIVLTK---IDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K +D Q +E T+ + + H S++KR+G+ + +A Sbjct: 291 GRAVVIAINKWDAVDSYQREQIQRQIE-TRLPFLKFASLH----FISAIKRQGLGPVWQA 345 Query: 206 ILET 209 I + Sbjct: 346 IAQA 349 >gi|124022202|ref|YP_001016509.1| GTPase SAR1 [Prochlorococcus marinus str. MIT 9303] gi|123962488|gb|ABM77244.1| GTPase SAR1 [Prochlorococcus marinus str. MIT 9303] Length = 441 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 4/62 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR VGKSSL+N L+ +N+ T A G T+H D+ NNL ++ LVD Sbjct: 54 IAVFGRVGVGKSSLLNALLG-QNVFATDVAHGCTRHQQAV---DWCQPINNLDSIELVDT 109 Query: 92 PG 93 PG Sbjct: 110 PG 111 >gi|72161614|ref|YP_289271.1| GTP-binding protein EngA [Thermobifida fusca YX] gi|71915346|gb|AAZ55248.1| Small GTP-binding protein domain:GTP-binding [Thermobifida fusca YX] Length = 463 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 27/184 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKSSL+N ++ R+ A + PG T+ + +N + LV Sbjct: 22 PVVAVVGRPNVGKSSLVNRIIGRRE-AVVEDVPGVTRDRVAY----DANWQGR--EFTLV 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVR---YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + N ++ R Y +E T + ++D G+ D+ V L Sbjct: 75 DTGGW------ETNAKGLAAMVARQAEYAAE--TADVILFVVDATVGITDEDEAVTRVL- 125 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +A +VL P + +E + N P P S++ +GI L A+ Sbjct: 126 -RATKRPVVLAANKVDGPLGDADAME-----LWNLGVGEP--YPVSALHGRGIGDLLDAV 177 Query: 207 LETI 210 L+ + Sbjct: 178 LDAM 181 >gi|21674392|ref|NP_662457.1| hypothetical protein CT1574 [Chlorobium tepidum TLS] gi|38257653|sp|Q8KC52|RSGA_CHLTE RecName: Full=Putative ribosome biogenesis GTPase RsgA gi|21647573|gb|AAM72799.1| conserved hypothetical protein [Chlorobium tepidum TLS] Length = 311 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 15/107 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA-LVDM 91 AFSG S VGKS+LIN+LV + L RT+ G+T V S+ LP ++D Sbjct: 185 AFSGHSGVGKSTLINLLVGCEEL-RTAETSGKTGK---GVHTTTSSAMFQLPGGGYVIDT 240 Query: 92 PG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 PG + A ++N+ + +RY+ E C + C H V+ Sbjct: 241 PGIREFNLAGITRENLRFYYTEFLRYMPE-----CTF--SSCSHTVE 280 >gi|16330488|ref|NP_441216.1| tRNA modification GTPase TrmE [Synechocystis sp. PCC 6803] gi|2495120|sp|P73839|MNME_SYNY3 RecName: Full=tRNA modification GTPase mnmE gi|1652979|dbj|BAA17896.1| thiophen and furan oxidation protein [Synechocystis sp. PCC 6803] Length = 456 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 224 VAIVGQPNVGKSSLLNAW-SRTDRAIVTDLPGTTRDV-----VESQLVVEGIP-IQVLDT 276 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G R ++++ L V L +D G + DQ ++ + + + Sbjct: 277 AGI---RETADQVEQIGVERSRKAAQQADL--VLLTVDAHQGWTEADQLIYEQVKDRPLI 331 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID L + + +YP + T++ GIE L AI+E +N Sbjct: 332 --LVINKID----------LGRADLV--SYPPEITNTVLTAAAANLGIEALENAIIEQVN 377 >gi|52145292|ref|YP_086749.1| tRNA modification GTPase TrmE [Bacillus cereus E33L] gi|196041935|ref|ZP_03109222.1| tRNA modification GTPase TrmE [Bacillus cereus NVH0597-99] gi|225867465|ref|YP_002752843.1| tRNA modification GTPase TrmE [Bacillus cereus 03BB102] gi|229187713|ref|ZP_04314849.1| tRNA modification GTPase mnmE [Bacillus cereus BGSC 6E1] gi|81685202|sp|Q630B8|MNME_BACCZ RecName: Full=tRNA modification GTPase mnmE gi|51978761|gb|AAU20311.1| tRNA modification GTPase [Bacillus cereus E33L] gi|196027190|gb|EDX65810.1| tRNA modification GTPase TrmE [Bacillus cereus NVH0597-99] gi|225785903|gb|ACO26120.1| tRNA modification GTPase TrmE [Bacillus cereus 03BB102] gi|228595781|gb|EEK53465.1| tRNA modification GTPase mnmE [Bacillus cereus BGSC 6E1] Length = 458 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+++F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEELFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D + +E A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDLPQAIDMERVIE---------LAAGNRVITTSLIEEQGIDELEKAI 374 >gi|120554059|ref|YP_958410.1| GTP-binding protein EngA [Marinobacter aquaeolei VT8] gi|166225823|sp|A1TZQ4|DER_MARAV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120323908|gb|ABM18223.1| small GTP-binding protein [Marinobacter aquaeolei VT8] Length = 473 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 21/163 (12%) Query: 23 LLPKAGPPE------------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 LLP+ PE I GR NVGKS+L+N ++ + + PG T+ + Sbjct: 158 LLPEPENPEDQDRADRYPGIRIGVVGRPNVGKSTLVNRMLGEDRVV-VYDMPGTTRD-SV 215 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 ++P + + L+D G + ++ V+ + I++ L V L+ID Sbjct: 216 YIPYERQGHE-----YTLIDTAGVRRRKNVREAVEKFS--IIKTLQAIDDAHVVILVIDA 268 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 R G+ D + F+ S I + K D + P E+ Sbjct: 269 REGLVDQDLHLIGFVLDAGRSLVIAINKWDGMDPEDRDRVKEQ 311 >gi|262373077|ref|ZP_06066356.1| GTP-binding protein Era [Acinetobacter junii SH205] gi|262313102|gb|EEY94187.1| GTP-binding protein Era [Acinetobacter junii SH205] Length = 341 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + A+ VD Sbjct: 41 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRH-------KIVGIDSREKSQAVFVD 92 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK--QIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L++ K Q D+ V L Sbjct: 93 TPGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVVDAQKWTQNDELVLEKLKNA 145 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K+D L + + + ++ E++P S+++ +E LR I + Sbjct: 146 EMPVILVINKLDTFENKNEALPLIRERAKLMDF----AEIVPVSALRGANLEHLRDTIEK 201 Query: 209 TINY 212 + Y Sbjct: 202 YLPY 205 >gi|118480511|ref|YP_897662.1| tRNA modification GTPase TrmE [Bacillus thuringiensis str. Al Hakam] gi|166200468|sp|A0RLR2|MNME_BACAH RecName: Full=tRNA modification GTPase mnmE gi|118419736|gb|ABK88155.1| tRNA modification GTPase trmE [Bacillus thuringiensis str. Al Hakam] Length = 458 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+++F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEELFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D + +E A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDLPQAIDMERVIE---------LAAGNRVITTSLIEEQGIDELEKAI 374 >gi|308069928|ref|YP_003871533.1| GTP-binding protein [Paenibacillus polymyxa E681] gi|305859207|gb|ADM70995.1| GTP-binding protein, era-like (Bex protein) [Paenibacillus polymyxa E681] Length = 300 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 21/164 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N ++ +K +A S+ P T++ F +D + + Sbjct: 11 VAIVGRPNVGKSTLMNHVIGQK-IAIMSDKPQTTRNKIHGVFTTED--------TQIVFL 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG + R K D L E + V LID G+ D+ + L + Sbjct: 62 DTPGI-HKRQSKLG-DYMNQTAFNTLGE---VEAVLFLIDAAEGLGGGDRFIAEQLKQVK 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +VL KID++ P +E+ + L Y A E+IP S+ Sbjct: 117 TPVILVLNKIDRIEPEALLPLIEQYRKL---YDFA--EIIPISA 155 >gi|193214522|ref|YP_001995721.1| tRNA modification GTPase TrmE [Chloroherpeton thalassium ATCC 35110] gi|193087999|gb|ACF13274.1| tRNA modification GTPase TrmE [Chloroherpeton thalassium ATCC 35110] Length = 483 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 26/176 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR N GKS+L+N L+ ++ A S+ PG T+ ++ + F + + +P L+D Sbjct: 244 AIVGRPNAGKSTLLNALLGKER-AIVSHVPGTTRD---YIEESF--VLDGVP-FRLIDTA 296 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA--V 150 G R ++S G I R + + V + D + + ++ L KK+ Sbjct: 297 GL---RLSDDALESEG--IRRSYEKITEADLVIFVHDATEKITEAERTEILALRKKSAHA 351 Query: 151 SYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + IV KID + +P A E+ H EV+P S+++R+G+ LR+ Sbjct: 352 KFFIVANKIDCVTGAPNFANAPDEQE----------HIEVVPISALRREGLSELRQ 397 >gi|253699395|ref|YP_003020584.1| GTP-binding protein EngA [Geobacter sp. M21] gi|259645878|sp|C6E0Y6|DER_GEOSM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|251774245|gb|ACT16826.1| small GTP-binding protein [Geobacter sp. M21] Length = 440 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 25/138 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N LV R+ A + PG T+ N+ F ++P + LV Sbjct: 3 PIIAIVGRPNVGKSTLFNRLVGRRK-AMVDDMPGVTRDRNYAEVNRF-----DVPFI-LV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G+ + + +++ + E+S + ++D R G+ D+DV Sbjct: 56 DTGGFEPETSDR---------LLQQMREQSRFAMDEADLILFVMDARGGLTPADRDVVDM 106 Query: 145 LDK--KAVSYQIVLTKID 160 L + K V Y ++ K+D Sbjct: 107 LRRINKPVFY--IINKVD 122 >gi|299135101|ref|ZP_07028292.1| GTP-binding protein Era [Afipia sp. 1NLS2] gi|298590078|gb|EFI50282.1| GTP-binding protein Era [Afipia sp. 1NLS2] Length = 306 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 29/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V +D + + LVD Sbjct: 16 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEDNAQI-------VLVDT 68 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG PK+ +D +W G + + + CV L+D R G+ + +F+ L Sbjct: 69 PGIF---TPKRRLDRAMVSTAWSG------AHDADMVCV--LLDARAGLDEEADAIFAKL 117 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V+ KID ++ +K N A + +++ G++ LR+A Sbjct: 118 EAVKHPKFLVINKIDLVAREKLLALAQKA-----NERIAFKQTFMIAAISGDGVDDLRRA 172 Query: 206 ILETI 210 + E + Sbjct: 173 LAEAM 177 >gi|88802177|ref|ZP_01117705.1| GTP-binding protein EngA [Polaribacter irgensii 23-P] gi|88782835|gb|EAR14012.1| GTP-binding protein EngA [Polaribacter irgensii 23-P] Length = 436 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 23/188 (12%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVP 73 PE L + P A GR N GKSS IN L+ + N+A T+ T++ F Sbjct: 166 PEAVDLEQVELPRFAVVGRPNAGKSSFINALIGKDRNIVTNIAGTTRDSIDTKYNRFGF- 224 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 DF+ LVD G K++++ + ++R + + L++D G Sbjct: 225 -DFN----------LVDTAGIRKKSKVKEDLEFYS--VMRAVRSIEYADVIILVVDATRG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPT 191 + DQ +F +K I++ K D + T T+ + ++R P +I T Sbjct: 272 FEGQDQSIFWLAEKNRKGVIILINKWDLVEKET--NTMRDFEAMVRKQVAPFTDIPIIFT 329 Query: 192 SSVKRKGI 199 S + ++ I Sbjct: 330 SVLTKQRI 337 >gi|307729253|ref|YP_003906477.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003] gi|307583788|gb|ADN57186.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003] Length = 445 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + +V DF + P L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVI-AFDMPGTTRD-SIYV--DFE--RQGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L + T Sbjct: 292 ALVVGVNKWDGLDSHVRERT 311 >gi|261253899|ref|ZP_05946472.1| GTP-binding protein Era [Vibrio orientalis CIP 102891] gi|260937290|gb|EEX93279.1| GTP-binding protein Era [Vibrio orientalis CIP 102891] Length = 325 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 28/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H V + + + A+ VD Sbjct: 34 VAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGV-----DTEGDYQAI-YVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H D+ V + L K Sbjct: 87 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTAD-DEMVLTKLQKSNF 140 Query: 151 SYQIVLTKIDKLSPTT-----AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D + QE K ++ +V+P S+ K I+VLRK Sbjct: 141 PVVLCVNKVDVVQDRNDVMMHMQEMSSKMDFV---------DVVPISAKHGKNIDVLRKH 191 Query: 206 ILETI 210 + E + Sbjct: 192 VREHL 196 >gi|160887320|ref|ZP_02068323.1| hypothetical protein BACOVA_05338 [Bacteroides ovatus ATCC 8483] gi|156107731|gb|EDO09476.1| hypothetical protein BACOVA_05338 [Bacteroides ovatus ATCC 8483] Length = 465 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 28/194 (14%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTVNIG 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V ++D + QI+Q Sbjct: 267 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDAVNAASQIEQ- 318 Query: 141 VFSFLDKKAV------SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 L +K + +V K D + ++ L L++++P E I S+ Sbjct: 319 ----LSEKIIPRCEGKHLIVVFNKADLIEGKQKEDLLS----LLKDFPKESTESIFISAK 370 Query: 195 KRKGIEVLRKAILE 208 +R+ L+K +++ Sbjct: 371 QRENTSELQKMLID 384 >gi|1524359|emb|CAA66716.1| GTPase [Synechocystis sp. PCC 6803] Length = 456 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 224 VAIVGQPNVGKSSLLNAW-SRTDRAIVTDLPGTTRDV-----VESQLVVEGIP-IQVLDT 276 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G R ++++ L V L +D G + DQ ++ + + + Sbjct: 277 AGI---RETADQVEQIGVERSRKAAQQADL--VLLTVDAHQGWTEADQLIYEQVKDRPLI 331 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID L + + +YP + T++ GIE L AI+E +N Sbjct: 332 --LVINKID----------LGRADLV--SYPPEITNTVLTAAAANLGIEALENAIIEQVN 377 >gi|325119172|emb|CBZ54724.1| GM14051, related [Neospora caninum Liverpool] Length = 1170 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVP-------KDFSNLK 80 P + G + GK+ L++ + R + + A G TQ + +F P + FS Sbjct: 576 PIVCILGHVDTGKTKLLDKI--RHTNVQDNEAGGITQQIGATYFPPEALIEQCRKFSKQD 633 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LP + ++D PG+ S+ L R S +++D HG++Q ++ Sbjct: 634 LRLPGLLIIDTPGHS----------SFTNLRARG---SSLCDLAIVVVDIMHGMEQQTRE 680 Query: 141 VFSFLDKKAVSYQIVLTKIDKL 162 L +K + I L KID+L Sbjct: 681 SLELLKQKKCPFIIALNKIDRL 702 >gi|300087240|ref|YP_003757762.1| ribosome-associated GTPase EngA [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526973|gb|ADJ25441.1| ribosome-associated GTPase EngA [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 439 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 19/181 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L+N L R+ A T + PG T+ +VP S + LV Sbjct: 5 PSVAIVGRQNVGKSTLLNRLTGRRQ-AITQDLPGTTRD-RMYVPVSHSGRE-----FLLV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + + E S + L + R G+ D+++ + + + Sbjct: 58 DTGGMAGGDTGDVFTPAVNEQVRIAMREAS---VIVFLTEARFGLTPQDEEIAEEVRRSS 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + + I + E +P S+ +G + L ++E Sbjct: 115 KPVILVVNKVDN---------DRQGHHAIEFHALGMGEPVPVSAYHGRGTDALLDRVVEL 165 Query: 210 I 210 + Sbjct: 166 L 166 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 9/138 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA +GR+NVGKSSL+N LV ++ A S PG T+ P DF + L+D Sbjct: 181 IAIAGRANVGKSSLLNTLVG-EDRAIVSPVPGTTRDA-VDTPIDFGT-----GGVVLIDT 233 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ V+ + ++R L V +++D D + + +K Sbjct: 234 AGIRRRGRIERGVEEYS--VIRSLHAIDRADVVLIVLDAGEPATAQDTHIAGYAREKCRG 291 Query: 152 YQIVLTKIDKLSPTTAQE 169 +V+ K D L E Sbjct: 292 LILVVNKSDLLKEVDMAE 309 >gi|229020710|ref|ZP_04177436.1| tRNA modification GTPase mnmE [Bacillus cereus AH1273] gi|229026925|ref|ZP_04183248.1| tRNA modification GTPase mnmE [Bacillus cereus AH1272] gi|228734383|gb|EEL85054.1| tRNA modification GTPase mnmE [Bacillus cereus AH1272] gi|228740586|gb|EEL90858.1| tRNA modification GTPase mnmE [Bacillus cereus AH1273] Length = 458 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 25/175 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+++F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEELFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I++ K D QE +E+ L A VI TS ++ +GI+ L KAI Sbjct: 330 IIIVNKTD-----LPQEIDMERVTEL-----AAGNRVITTSLIEEQGIDELEKAI 374 >gi|284166816|ref|YP_003405095.1| small GTP-binding protein [Haloterrigena turkmenica DSM 5511] gi|284016471|gb|ADB62422.1| small GTP-binding protein [Haloterrigena turkmenica DSM 5511] Length = 205 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 27/148 (18%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMAL 88 E+ GRSNVGKS+L+ + K T PG T+ N + +DF + Sbjct: 11 EVVLVGRSNVGKSTLMREITGHK--FDTGGKPGVTRQPNHYDWAAEDF----------VV 58 Query: 89 VDMPGYGYARAPKKNV-DSWGGLIVRYLSERS----------TLRCVYLLIDCRHGVKQI 137 D+PG+G+ + + IV+Y+ E + + V +ID G +I Sbjct: 59 TDLPGFGFMSGVDEEYREEIKTDIVQYVEEYADNILVGVLVVDGKSVIDIIDRHSGPDEI 118 Query: 138 --DQDVFSFLDKKAVSYQIVLTKIDKLS 163 D ++F FL V + + K+DK+ Sbjct: 119 PYDVEMFHFLRDVDVPTVVAVNKMDKVD 146 >gi|220906981|ref|YP_002482292.1| GTP-binding protein EngA [Cyanothece sp. PCC 7425] gi|254783149|sp|B8HQE1|DER_CYAP4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219863592|gb|ACL43931.1| small GTP-binding protein [Cyanothece sp. PCC 7425] Length = 453 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 19/143 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG----RTQHLNFFVPKDFSNLKNNLPA 85 P +A GR NVGKS+L+N L + +A + PG RT +F+ +DF Sbjct: 4 PVVAIVGRPNVGKSTLVNRLTGER-VAIVHDQPGVTRDRTYRPSFWQDRDF--------- 53 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G +A + + + + ++ S R L++D + G+ D+++ +L Sbjct: 54 -LVVDTGGLVFA----DDTEFLPLIRQQVVTALSEARVAILVVDGQQGITAADEEIAQWL 108 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQ 168 ++++ + + K + AQ Sbjct: 109 RQQSLPVLVAVNKCESPQQGLAQ 131 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 24/153 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 +A GR NVGKSSL+N +V + A S G T+ ++ V +D + L+D Sbjct: 180 VAIVGRPNVGKSSLLNAVVGEQR-AIVSPISGTTRDAIDTLVERDGQRYR-------LID 231 Query: 91 MPGYGYARAPKKNVDSWGGL--IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G +KNVD I R V L++D GV + DQ + + + Sbjct: 232 TAGI----RKQKNVDYGPEFFGINRAFKAIQRAEVVLLVLDALDGVTEQDQKLAGRIVDE 287 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D +EK Y I +Y Sbjct: 288 GCACVIVVNKWD---------AVEKDSYTIYDY 311 >gi|323491197|ref|ZP_08096383.1| GTPase Era [Vibrio brasiliensis LMG 20546] gi|323314565|gb|EGA67643.1| GTPase Era [Vibrio brasiliensis LMG 20546] Length = 325 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 28/194 (14%) Query: 26 KAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 +A PE +A GR NVGKS+L+N ++ +K ++ TS P T+H V + Sbjct: 22 QASSPENQHCGFVAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGV-----DT 75 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQID 138 + + A+ VD PG N L+ R S S + V+ L+D H D Sbjct: 76 EGDYQAI-YVDTPGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTSD-D 128 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + V + L K + + K+D + +E +K + +V+P S+ Sbjct: 129 EMVLTKLQKSNFPVVLCVNKVDNVQDRNDVMLHMMEMSKKM------EFVDVVPISAKHG 182 Query: 197 KGIEVLRKAILETI 210 K I+VLRK + E + Sbjct: 183 KNIDVLRKHVREHL 196 >gi|170694783|ref|ZP_02885934.1| small GTP-binding protein [Burkholderia graminis C4D1M] gi|170140414|gb|EDT08591.1| small GTP-binding protein [Burkholderia graminis C4D1M] Length = 445 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + +V DF + P L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVI-AFDMPGTTRD-SIYV--DFE--RQGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L + T Sbjct: 292 ALVVGVNKWDGLDSHVRERT 311 >gi|311747167|ref|ZP_07720952.1| tRNA modification GTPase TrmE [Algoriphagus sp. PR1] gi|126578876|gb|EAZ83040.1| tRNA modification GTPase TrmE [Algoriphagus sp. PR1] Length = 460 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 26/193 (13%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 ++G + K G P + +G+ N GKS+L+N L+N + A S+ G T+ L +D N+ Sbjct: 215 DLGNVIKNGVPTV-IAGKPNAGKSTLLNALLNEEK-AIVSDIAGTTRDL----IEDEINI 268 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH-GVKQID 138 + +D G R +++ G + R + T + L D + +I+ Sbjct: 269 GGVI--FRFIDTAGL---RETTDTIEAIG--VSRTQEKMKTASLILYLFDLGDTDLVEIN 321 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +DV + L+ V + + K+DK +P E K+KY P+ I S+ ++ Sbjct: 322 RDV-NKLENLGVPFLKIANKLDKANPELVSEL--KSKY---------PDTIFISAGNKEN 369 Query: 199 IEVLRKAILETIN 211 +E L+ ILE +N Sbjct: 370 LEGLKVKILELVN 382 >gi|110737138|dbj|BAF00519.1| hypothetical protein [Arabidopsis thaliana] Length = 377 Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV +K TS PG+T+H + D + L D Sbjct: 311 VGFVGYPNVGKSSTINALVGQKRTGVTS-TPGKTKHFQTLIISD---------ELMLCDC 360 Query: 92 PG 93 PG Sbjct: 361 PG 362 >gi|323703263|ref|ZP_08114914.1| tRNA modification GTPase TrmE [Desulfotomaculum nigrificans DSM 574] gi|323531728|gb|EGB21616.1| tRNA modification GTPase TrmE [Desulfotomaculum nigrificans DSM 574] Length = 461 Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 24/176 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+ + A ++ PG T+ + ++F N++ +P + ++D G Sbjct: 229 GKPNVGKSSLLNALLKEQR-AIVTDIPGTTRD----IIEEFLNIQ-GVP-LKIIDTAGL- 280 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R V+ G R L ++ L V L++D G+ + D + S + DKK + + Sbjct: 281 --RETDDLVEKLGVARSRQLINQADL--VLLVLDATTGITEDDLKIISLVKDKKTL---V 333 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++ KID + + ++ +YL ++ + S+ + G++ L +AILE + Sbjct: 334 LINKIDIAANRINSDKIK--RYLGDSFT------LEISAKQEIGLDKLEQAILELV 381 >gi|22298504|ref|NP_681751.1| tRNA modification GTPase TrmE [Thermosynechococcus elongatus BP-1] gi|223635295|sp|P0C8N9|MNME_SYNEL RecName: Full=tRNA modification GTPase mnmE gi|223635296|sp|P0C8P1|MNME_THEEB RecName: Full=tRNA modification GTPase mnmE gi|5420315|emb|CAB46651.1| possible thiophene and furan oxidation protein [Synechococcus elongatus] gi|22294684|dbj|BAC08513.1| thiophen and furan oxidation protein [Thermosynechococcus elongatus BP-1] Length = 469 Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust. Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 27/198 (13%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G L + G ++A GR NVGKSSL+N +R + A ++ PG T+ + + + Sbjct: 214 ERGALIRTGL-KVAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDI-----VESQLV 266 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 +P + ++D G R V+ G + R + + L+ID G DQ Sbjct: 267 VGGIP-IQVLDTAGI---RETDNLVEQIG--VQRSRQAALSADLILLVIDASQGWTAADQ 320 Query: 140 DVFSFLDKKAV------SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ L K S +VL K D LS TT + + P A + S+ Sbjct: 321 AIYDQLQLKQRRQQAPQSVLVVLNKADLLSETTEVKDIP--------LPIAPIPTVLLSA 372 Query: 194 VKRKGIEVLRKAILETIN 211 + ++GIE L AIL + Sbjct: 373 LSQRGIEQLEDAILHLVQ 390 >gi|251778692|ref|ZP_04821612.1| ribosome-associated GTPase EngA [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083007|gb|EES48897.1| ribosome-associated GTPase EngA [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 438 Score = 40.4 bits (93), Expect = 0.18, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 11/144 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSLIN L+ + L S+ G T+ S L+ L+D Sbjct: 179 IAMIGKPNVGKSSLINKLLGEERLI-VSDVAGTTRDAI------DSYLETEQGKFILIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + +I Y S C+ L+ID + GV + D+ + + + + Sbjct: 232 AGLRRKSKVKEEIERY-SVIRTYASIEKADVCI-LMIDAQDGVTEQDEKIIGYAHELNKA 289 Query: 152 YQIVLTKIDKLSPTTAQETLEKTK 175 +++ K D + +T+EK K Sbjct: 290 IMVLVNKWDLVEKD--DKTMEKFK 311 >gi|329297578|ref|ZP_08254914.1| GTP-binding protein Der [Plautia stali symbiont] Length = 496 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V L+D R GV DQ + + Sbjct: 46 EVEGREFIVIDTGGIDGTEEGVENRMAEQSLLAIEEADVVLFLVDARAGVMPADQQIANH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSRDKATFFVANKTDGLDPDAA---------VLDFYALGLGEIHPIAASHGRGVTSLLE 156 Query: 205 AIL 207 L Sbjct: 157 TAL 159 >gi|271968594|ref|YP_003342790.1| ABC transporter [Streptosporangium roseum DSM 43021] gi|270511769|gb|ACZ90047.1| putative ABC transporter [Streptosporangium roseum DSM 43021] Length = 547 Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 32/56 (57%) Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 VL ++D+L P E + + L+R +P ++ TS++ KG++ LR + ET+ Sbjct: 196 VLNQVDRLDPEELAECVADLEDLLRREGVENPVIVTTSAISGKGVDGLRAVLAETV 251 >gi|188586247|ref|YP_001917792.1| small GTP-binding protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|226741142|sp|B2A4M9|DER_NATTJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|179350934|gb|ACB85204.1| small GTP-binding protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 440 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 9/128 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSLIN ++N++ L SN PG T+ V ++ +D G Sbjct: 184 GRPNVGKSSLINKILNKERLI-VSNMPGTTRDAIDTV------IEREDQKYVFIDTAGLR 236 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 + ++ + ++R + LLID G+ + D+ + ++K I+ Sbjct: 237 KKSKIDERLEKYS--VIRSIKGMERSNIALLLIDVTKGILEQDKKIAGLAEEKGKGLIIL 294 Query: 156 LTKIDKLS 163 L K D + Sbjct: 295 LNKWDAIE 302 >gi|304440203|ref|ZP_07400093.1| ribosome-associated GTPase EngA [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371252|gb|EFM24868.1| ribosome-associated GTPase EngA [Peptoniphilus duerdenii ATCC BAA-1640] Length = 442 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 + G+ NVGKSSLIN ++ + + ++ PG T+ + F+ KD + LV Sbjct: 182 VTLIGKPNVGKSSLINFILGEER-SIVTDIPGTTRDSIDSHFIYKD--------TELTLV 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D G + + V+ + ++R L+ ERS + C+ LLID GV + D + + Sbjct: 233 DTAGLRKKKKINEAVERYS--VIRTLTAIERSNV-CI-LLIDAEEGVSEQDSKIVGYAHD 288 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + + + K D + T ++++K + IR Sbjct: 289 NNKAIVVAVNKWDAV--TKDNDSIKKYEKSIR 318 >gi|188587902|ref|YP_001920548.1| GTP-binding protein EngA [Clostridium botulinum E3 str. Alaska E43] gi|238689667|sp|B2V3Z1|DER_CLOBA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|188498183|gb|ACD51319.1| ribosome-associated GTPase EngA [Clostridium botulinum E3 str. Alaska E43] Length = 438 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 11/144 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSLIN L+ + L S+ G T+ S L+ L+D Sbjct: 179 IAMIGKPNVGKSSLINKLLGEERLI-VSDVAGTTRDAI------DSYLETEQGKFILIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + +I Y S C+ L+ID + GV + D+ + + + + Sbjct: 232 AGLRRKSKVKEEIERY-SVIRTYASIEKADVCI-LMIDAQDGVTEQDEKIIGYAHELNKA 289 Query: 152 YQIVLTKIDKLSPTTAQETLEKTK 175 +++ K D + +T+EK K Sbjct: 290 IMVLVNKWDLVEKD--DKTMEKFK 311 >gi|182418977|ref|ZP_02950233.1| GTP-binding protein EngA [Clostridium butyricum 5521] gi|237668464|ref|ZP_04528448.1| ribosome-associated GTPase EngA [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377260|gb|EDT74828.1| GTP-binding protein EngA [Clostridium butyricum 5521] gi|237656812|gb|EEP54368.1| ribosome-associated GTPase EngA [Clostridium butyricum E4 str. BoNT E BL5262] Length = 438 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 9/129 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSLIN L+ + + A ++ S L+ L+D Sbjct: 179 IAMIGKPNVGKSSLINKLLGEDRVIVSEVAGTTRDAID-------SELETEEGKFILIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + + ERS + C+ L+ID + G+ + D+ + + + + Sbjct: 232 AGLRRKSKVKEEIERYSVVRTYAAIERSDV-CI-LMIDAQEGITEQDEKIIGYAHEMRKA 289 Query: 152 YQIVLTKID 160 I++ K D Sbjct: 290 IMIIVNKWD 298 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 21/138 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K ++ + PG T+ + + ++ ++ Sbjct: 4 PIVAMVGRPNVGKSTLFNRLAG-KRISIVQDTPGVTRDRVYAEAEWLTH------TFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P++N +IV+ + ++ T + ++D + G+ D +V + Sbjct: 57 DTGGI----EPERN-----DIIVQQMRRQANIAIETADVIVFIVDGKEGLTAADHEVATM 107 Query: 145 LDKKAVSYQIVLTKIDKL 162 L K +V+ K+D L Sbjct: 108 LRKSKKPVVLVVNKVDSL 125 >gi|88810613|ref|ZP_01125870.1| GTP-binding protein EngA [Nitrococcus mobilis Nb-231] gi|88792243|gb|EAR23353.1| GTP-binding protein EngA [Nitrococcus mobilis Nb-231] Length = 476 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 9/138 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ + + + PG T+ + F+P + A L+D Sbjct: 185 VAIVGRPNVGKSTLINRLLGEERVL-VHDQPGTTRD-SIFIPFERDGF-----AYTLIDT 237 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + ++ L + + V LL+D + + D + ++ + Sbjct: 238 AGMRRRSRVYEAVEKFSA--IKTLQAVTAAQVVILLLDAHESITEQDVRIIGYVLDAGRA 295 Query: 152 YQIVLTKIDKLSPTTAQE 169 + + K D L P+ ++ Sbjct: 296 LVLAVNKWDGLEPSRREQ 313 >gi|328874499|gb|EGG22864.1| guanine nucleotide binding protein 1 [Dictyostelium fasciculatum] Length = 1097 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 24/116 (20%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNL 83 PK I G NVGKSSLIN L+ +K + TS PG T+H F+ K Sbjct: 424 PKENCITIGTVGHPNVGKSSLINGLMGKK-VVSTSRTPGHTKHFQTIFLTK--------- 473 Query: 84 PAMALVDMPGYGYARAPK-KNVDSWGGLI-----------VRYLSERSTLRCVYLL 127 + L D PG + + K++ GL +RYL++R + VY L Sbjct: 474 -GIVLCDCPGLVFPALDRPKSLQVLCGLYPIAQVREPYSAIRYLADRVPIEKVYGL 528 >gi|323486971|ref|ZP_08092286.1| hypothetical protein HMPREF9474_04037 [Clostridium symbiosum WAL-14163] gi|323692018|ref|ZP_08106266.1| GTP-binding protein engA [Clostridium symbiosum WAL-14673] gi|323399743|gb|EGA92126.1| hypothetical protein HMPREF9474_04037 [Clostridium symbiosum WAL-14163] gi|323503941|gb|EGB19755.1| GTP-binding protein engA [Clostridium symbiosum WAL-14673] Length = 444 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 11/169 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L+ +N S+ G T+ D + + +N + Sbjct: 180 PRIAIVGKPNVGKSSIINKLLG-ENRVIVSDIAGTTRD-----AVD-TEIIHNGTEYVFI 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 233 DTAGLRRKSKIKEELERYS--IIRTVTAVERADVVLVVIDAVEGVTEQDAKIAGIAHERG 290 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 IV+ K D + T T E K K + P A I ++ +R Sbjct: 291 KGIIIVVNKWDAIEKTDKTIYEYTNKIKMTLSFIPYAEFIFISAATGQR 339 >gi|297531687|ref|YP_003672962.1| tRNA modification GTPase TrmE [Geobacillus sp. C56-T3] gi|297254939|gb|ADI28385.1| tRNA modification GTPase TrmE [Geobacillus sp. C56-T3] Length = 462 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L + +N A ++ PG T+ V +++ N++ +P + L+D G Sbjct: 231 GRPNVGKSSLLNALAH-ENRAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLIDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + + +R+ L + L+++ + + D+ +F+ ++ + ++ Sbjct: 283 --RETEDVVERIGVERSQQMLKRADL--ILLVLNYHEPLTEEDERLFAMIE--GMDAIVI 336 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D + +E+ K L P V+ TS + +GI+ L KAI Sbjct: 337 VNKTD----LPRRIDMERVKELAAGRP-----VVATSLLHEQGIDELEKAI 378 >gi|218282653|ref|ZP_03488868.1| hypothetical protein EUBIFOR_01454 [Eubacterium biforme DSM 3989] gi|218216416|gb|EEC89954.1| hypothetical protein EUBIFOR_01454 [Eubacterium biforme DSM 3989] Length = 404 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 20/138 (14%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A I F G N GKSS++N + N+ +++ SN G T V K L + + Sbjct: 24 ANRTHIGFFGLRNAGKSSVVNAITNQ-SMSLVSNIKGTTTDP---VKKSMEILP--IGPV 77 Query: 87 ALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +VD PG +D G L I R L T+ L++D G+++ID D+ Sbjct: 78 VIVDTPG----------MDDEGTLGELRIKRTLEVLKTIDMAVLVVDANVGLQKIDLDLI 127 Query: 143 SFLDKKAVSYQIVLTKID 160 + + Y I K D Sbjct: 128 GMFKENKLPYFIAFNKCD 145 >gi|226328000|ref|ZP_03803518.1| hypothetical protein PROPEN_01891 [Proteus penneri ATCC 35198] gi|225203704|gb|EEG86058.1| hypothetical protein PROPEN_01891 [Proteus penneri ATCC 35198] Length = 343 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 13/154 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + PG T+ + ++P ++ + Sbjct: 51 PSTLPVKLAIVGRPNVGKSTLTNRMLGEDRVV-VYDMPGTTRD-SIYIP-----MERDDK 103 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 ++D G K+ V+ + +++ L L+ID R G+ D + + Sbjct: 104 DYIIIDTAGVRKRGKVKETVEKFS--VIKTLQAIEDANVALLVIDAREGISDQDLSLLGY 161 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + S I + K D ++ Q+ E+ K ++ Sbjct: 162 ILNAGRSLVIAVNKWDGMT----QDDREQVKAML 191 >gi|194016355|ref|ZP_03054969.1| tRNA modification GTPase TrmE [Bacillus pumilus ATCC 7061] gi|194011828|gb|EDW21396.1| tRNA modification GTPase TrmE [Bacillus pumilus ATCC 7061] Length = 459 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 228 GRPNVGKSSLLNSLVQETK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L +L+ + + ++D+ F + ++ Sbjct: 280 --RETEDIVERIGVERSRQVLKEADL----ILLVLNYSEELSEEDIKLFEAVSGMDIIVI 333 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D L P +EK K L ++ P V+ TS ++ KGI+ L AI Sbjct: 334 VNKTD-LEPKL---DVEKVKQLAKDRP-----VVTTSLLQEKGIDELEMAI 375 >gi|254507481|ref|ZP_05119615.1| GTP-binding protein Era [Vibrio parahaemolyticus 16] gi|219549551|gb|EED26542.1| GTP-binding protein Era [Vibrio parahaemolyticus 16] Length = 325 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H V + + + A+ VD Sbjct: 34 VAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGV-----DTEGDYQAI-YVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H D+ V + L K Sbjct: 87 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTAD-DEMVLTKLQKSNF 140 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D + +E +K + +V+P S+ K I+VLRK + E Sbjct: 141 PVVLCVNKVDNVQDRNDVMLHMMEMSKKM------EFVDVVPISAKHGKNIDVLRKHVRE 194 Query: 209 TI 210 + Sbjct: 195 HL 196 >gi|157694475|ref|YP_001488937.1| tRNA modification GTPase TrmE [Bacillus pumilus SAFR-032] gi|205829058|sp|A8FJG0|MNME_BACP2 RecName: Full=tRNA modification GTPase mnmE gi|157683233|gb|ABV64377.1| tRNA modification GTP-binding protein TrmE [Bacillus pumilus SAFR-032] Length = 459 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 228 GRPNVGKSSLLNSLVQETK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L +L+ + + ++D+ F + ++ Sbjct: 280 --RETEDIVERIGVERSRQVLKEADL----ILLVLNYSEELSEEDIKLFEAVSGMDIIVI 333 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D L P +EK K L ++ P V+ TS ++ KGI+ L AI Sbjct: 334 VNKTD-LEPKL---DVEKVKQLAKDRP-----VVTTSLLQEKGIDELEMAI 375 >gi|161524640|ref|YP_001579652.1| GTP-binding protein EngA [Burkholderia multivorans ATCC 17616] gi|189350604|ref|YP_001946232.1| GTP-binding protein EngA [Burkholderia multivorans ATCC 17616] gi|238687037|sp|A9AH00|DER_BURM1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|160342069|gb|ABX15155.1| small GTP-binding protein [Burkholderia multivorans ATCC 17616] gi|189334626|dbj|BAG43696.1| GTP-binding protein [Burkholderia multivorans ATCC 17616] Length = 445 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRSGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQ----ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGLDEHARERAKADLTRKLKFL--DFAKSH----FISAAKKTGIGALMRSV 345 >gi|23098994|ref|NP_692460.1| hypothetical protein OB1539 [Oceanobacillus iheyensis HTE831] gi|22777222|dbj|BAC13495.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 285 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 14/73 (19%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT-QHLNFFVPKDFSNLK 80 G+ P+ P G NVGKS+LIN L N+K +A+T + PG T Q L V KDF Sbjct: 115 GIQPR--PARAMIVGIPNVGKSTLINRLANKK-IAKTGDRPGITKQQLWIKVKKDFE--- 168 Query: 81 NNLPAMALVDMPG 93 L+D PG Sbjct: 169 -------LLDTPG 174 >gi|253571982|ref|ZP_04849387.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838579|gb|EES66665.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 405 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 19/189 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A IA G+ N GKSSLIN L ++ A S+ PG T P + + + Sbjct: 7 PNANRLHIALFGKRNSGKSSLINALTG-QDTALVSDTPGTTTD-----PVQKAMEIHGIG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQIDQDVF 142 +D PG+ D G L R + ++ + L+ C G + Sbjct: 61 PCLFIDTPGF----------DDEGELGNRRIERTWKAVEKTDIALLLCAGGSSAEETGEP 110 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVIPTSSVKRKGIEV 201 F ++ Q+ I + + + T L IR T + IP S+ ++ GIE+ Sbjct: 111 DFTEELHWLEQLKAKNIPTILLINKADIRKNTASLAIRIKETFGSQPIPVSAKEKTGIEL 170 Query: 202 LRKAILETI 210 +R+AILE + Sbjct: 171 IRQAILEKL 179 >gi|153872876|ref|ZP_02001641.1| Small GTP-binding protein domain [Beggiatoa sp. PS] gi|152070659|gb|EDN68360.1| Small GTP-binding protein domain [Beggiatoa sp. PS] Length = 515 Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 9/139 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L+N ++ + + T + PG T+ + F+P + + L+D Sbjct: 230 KVAIIGRPNVGKSTLVNRMLGYERVI-TFDQPGTTRD-SIFIP-----FERDGQLYTLID 282 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +++ L T V +L+D R G+ D ++ + Sbjct: 283 TAGVRRRARVSEKIEKFS--VIKSLQAIETGNVVIMLLDGREGITDQDANLLGIVIDSGC 340 Query: 151 SYQIVLTKIDKLSPTTAQE 169 + I + K D L + ++ Sbjct: 341 ALIIAVNKWDGLEKSHREQ 359 >gi|330502446|ref|YP_004379315.1| GTP-binding protein Era [Pseudomonas mendocina NK-01] gi|328916732|gb|AEB57563.1| GTP-binding protein Era [Pseudomonas mendocina NK-01] Length = 299 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 26/184 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 12 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGEVQAVYVD 63 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG N RY+ S + L+ V +++ ++ D+D + Sbjct: 64 TPGLHKHNDKALN---------RYMNRSASTALKDVDVVVFVVDRMRWTDEDQLVLEKVQ 114 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V I+L K D+L + E L +L P A E++P S+++ + ++ L K + Sbjct: 115 HVKCPILLAVNKADRLEDKS--ELLPHLNWLAEQLPQA--EIVPISALQGQNLDTLEKLV 170 Query: 207 LETI 210 E + Sbjct: 171 GERL 174 >gi|237756936|ref|ZP_04585406.1| GTP-binding protein EngA [Sulfurihydrogenibium yellowstonense SS-5] gi|237690908|gb|EEP60046.1| GTP-binding protein EngA [Sulfurihydrogenibium yellowstonense SS-5] Length = 209 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N ++ ++ A + PG T+ ++ +K +VD Sbjct: 4 VAIVGRPNVGKSSLFNRIIGQRK-AIVEDVPGVTRD-RIVSTAEWRGVK-----FEVVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL-LIDCRHGVKQIDQDVFSFLDKKAV 150 GY + D + I + + + L +++ ++D + G+ +D+++ + L + Sbjct: 57 GGYITG-----DEDKFAPYIRKQVEKELELSDLFIFVVDGKQGLTPLDKEIANILHRTEK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KID EK K Y +I S++++ G+ L ++E I Sbjct: 112 PVIVAVNKID---------DTEKEKLAYEFYELGFENIISISTIQKLGLAELLDKVVEYI 162 >gi|257068697|ref|YP_003154952.1| cytidylate kinase [Brachybacterium faecium DSM 4810] gi|256559515|gb|ACU85362.1| cytidylate kinase [Brachybacterium faecium DSM 4810] Length = 755 Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats. Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 28/139 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF----VPKDFSNLKNNLPA 85 P +A GR NVGKS+L+N ++ R+ A + PG T+ F+ KDF Sbjct: 322 PVVAVVGRPNVGKSTLVNRILGRRE-AVVEDRPGVTRDRVFYEAEWTGKDF--------- 371 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSER----STLRCVYLLIDCRHGVKQIDQDV 141 LVD G+ D G+ R + S V ++D GV D+ + Sbjct: 372 -WLVDTGGWE---------DRVQGIAYRVAEQAEVAVSLADVVLFIVDANVGVTTTDEQL 421 Query: 142 FSFLDKKAVSYQIVLTKID 160 L K V +V K+D Sbjct: 422 LKVLRKANVPIVLVANKVD 440 >gi|29349959|ref|NP_813462.1| tRNA modification GTPase TrmE [Bacteroides thetaiotaomicron VPI-5482] gi|32171810|sp|Q89Z26|MNME_BACTN RecName: Full=tRNA modification GTPase mnmE gi|29341870|gb|AAO79656.1| putative GTPase, ThdF family [Bacteroides thetaiotaomicron VPI-5482] Length = 465 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 22/190 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTINIG 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG---VKQI 137 +D G R ++S G I R + V ++D +KQ+ Sbjct: 267 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDSSDASSQIKQL 319 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + + ++K + +V K D + +E L++N+P + + I S+ +R+ Sbjct: 320 SEKIIPRCEEKQLI--VVFNKADLIEEMQKEE----LSALLKNFPKEYTKSIFISAKERR 373 Query: 198 GIEVLRKAIL 207 + L+K ++ Sbjct: 374 QTDELQKMLI 383 >gi|27905016|ref|NP_778142.1| putative GTP-binding protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46395803|sp|Q89A14|DER_BUCBP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|27904414|gb|AAO27247.1| putative GTP-binding protein [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 462 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 12/134 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPG--RTQHLNFFVPKDFSNLKNNLPAMALV 89 IA GR+NVGKS+L N L +N A SN R + F + N + L+ Sbjct: 5 IALIGRTNVGKSTLFNKLTGNRNDALASNHASLTRDRKHGFIIV--------NNTKIVLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG K ++D V++ +++ L C L++ R+ + D ++ L K Sbjct: 57 DTPGINEDSKKKISLDKEIFEQVKFSIKQADLVC--LVVSARNKLMHKDVEIIEMLRKFQ 114 Query: 150 VSYQIVLTKIDKLS 163 +++ KI+ L+ Sbjct: 115 KKIFLLVNKIEGLN 128 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 21/140 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA G+ NVGKS+LIN+L+N K + SN PG T+ N+ + ++N + M D Sbjct: 202 KIAIIGKPNVGKSTLINVLLNEKRVIVDSN-PGTTRDSNWSLI-----IRNKINYM-FFD 254 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC------VYLLIDCRHGVKQIDQDVFSF 144 G K + ++ + +S TL+ V L+ID G D + + Sbjct: 255 TAGI----RKKNKISTY----IEKISVHKTLKILNLVHVVLLVIDAMDGFSDQDFYLLNL 306 Query: 145 LDKKAVSYQIVLTKIDKLSP 164 + K S I+L K DKLS Sbjct: 307 IIKNGCSVIIILNKNDKLSE 326 >gi|307822499|ref|ZP_07652730.1| ribosome-associated GTPase EngA [Methylobacter tundripaludum SV96] gi|307736103|gb|EFO06949.1| ribosome-associated GTPase EngA [Methylobacter tundripaludum SV96] Length = 465 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 26/163 (15%) Query: 16 RGVPEIGLLPKAG---PPE------------IAFSGRSNVGKSSLINILVNRKNLARTSN 60 +G+PE LL K PP+ IA GR NVGKS+L+N L+ + + + Sbjct: 149 KGIPE--LLEKVNQLLPPDKGEVEEAHSGIGIAVVGRPNVGKSTLVNRLLGEERVI-VFD 205 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG T+ + ++P + N L+D G + ++ + +++ L Sbjct: 206 EPGTTRD-SIYIP-----FERNGKKFTLIDTAGMRRRSKIAETIEKFS--VIKSLQAIEK 257 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 V LID R G+ D + + + + I L K D +S Sbjct: 258 ANVVIYLIDAREGITDQDAHLLGLVLEAGRALIIGLNKWDGIS 300 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 22/176 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ G T+ + + +K +V Sbjct: 3 PVIALVGRPNVGKSTLFNYLTRSRD-ALVADFSGLTRD------RQYGRVKLGDRPCLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + ++S+ V+ E + + V+ ++D R G+ D+ + L K Sbjct: 56 DTGGIA---DDAEGIESFARKQVQVALEEADI--VFFMVDAREGLSASDKVIADTLRKLQ 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLRK 204 +V K+D L +TA Y A E + ++ KGI E+L K Sbjct: 111 KPVILVTNKVDGLDASTAASDF---------YSLALGEPVKIAASHGKGIPELLEK 157 >gi|297843620|ref|XP_002889691.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata] gi|297335533|gb|EFH65950.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata] Length = 583 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV +K TS PG+T+H + D + L D Sbjct: 305 VGFVGYPNVGKSSTINALVGQKRTGVTS-TPGKTKHFQTLIISD---------ELMLCDC 354 Query: 92 PG 93 PG Sbjct: 355 PG 356 >gi|163736771|ref|ZP_02144190.1| Small GTP-binding protein domain [Phaeobacter gallaeciensis BS107] gi|161390641|gb|EDQ14991.1| Small GTP-binding protein domain [Phaeobacter gallaeciensis BS107] Length = 508 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 17/132 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV K LA + PG T+ L + +L+ +VD Sbjct: 27 LAIVGRPNVGKSTLFNRLVG-KRLALVDDQPGVTRDLREGEAR-LGDLR-----FTVVDT 79 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDKK 148 G A +S G + R L+ER+ C+++ ID R GV IDQ L KK Sbjct: 80 AGLEDA-----TDNSLEGRM-RRLTERAVDMADVCLFM-IDARVGVTPIDQMFAEILRKK 132 Query: 149 AVSYQIVLTKID 160 + + K + Sbjct: 133 SAHVILAANKAE 144 >gi|163743210|ref|ZP_02150592.1| GTP-binding protein EngA [Phaeobacter gallaeciensis 2.10] gi|161383627|gb|EDQ08014.1| GTP-binding protein EngA [Phaeobacter gallaeciensis 2.10] Length = 508 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 17/132 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV K LA + PG T+ L + +L+ +VD Sbjct: 27 LAIVGRPNVGKSTLFNRLVG-KRLALVDDQPGVTRDLREGEAR-LGDLR-----FTVVDT 79 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDKK 148 G A +S G + R L+ER+ C+++ ID R GV IDQ L KK Sbjct: 80 AGLEDA-----TDNSLEGRM-RRLTERAVDMADVCLFM-IDARVGVTPIDQMFAEILRKK 132 Query: 149 AVSYQIVLTKID 160 + + K + Sbjct: 133 SAHVILAANKAE 144 >gi|39972447|ref|XP_367614.1| hypothetical protein MGG_07525 [Magnaporthe oryzae 70-15] gi|145016722|gb|EDK01152.1| hypothetical protein MGG_07525 [Magnaporthe oryzae 70-15] Length = 650 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 IFL+ PE PK ++ G NVGKSS IN L+ K ++ S+ PG+T+H Sbjct: 328 IFLKHAPESSADPKQ-KMQVGLVGYPNVGKSSTINALIGAKKVS-VSSTPGKTKHFQ 382 >gi|327310750|ref|YP_004337647.1| small GTP-binding protein [Thermoproteus uzoniensis 768-20] gi|326947229|gb|AEA12335.1| small GTP-binding protein [Thermoproteus uzoniensis 768-20] Length = 565 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 36/178 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IAF G NVGKS+L L R +T+N PG+T +N ++ + LVD+ Sbjct: 5 IAFVGPPNVGKSTLFYALTGRY--VKTANYPGKTLEMN------VGKIRGT--EVELVDL 54 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY---LLIDCRHGVKQIDQDVFSFLDKK 148 PG ++PK ++ L+ R L Y +++ H +K+ + + Sbjct: 55 PGVFNPQSPKDEDEA--------LALREALEGPYDGVVVVGAPHAIKE----ALALAEHI 102 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 S +VL +D +P E L + Y TS+VK G+ LR+ Sbjct: 103 GRSRPVVLVVNMVDLGAPEMPSEELSAKMGIPVFY---------TSAVKGLGVLQLRR 151 >gi|323490387|ref|ZP_08095602.1| hypothetical protein GPDM_13581 [Planococcus donghaensis MPA1U2] gi|323396057|gb|EGA88888.1| hypothetical protein GPDM_13581 [Planococcus donghaensis MPA1U2] Length = 337 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 26/178 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ G N GKS+ +N ++ ++A T+ PG T ++ + + N+K +D Sbjct: 34 ISLIGEVNAGKSTTVNKIIGE-DIASTNPMPGETVSVDPYNIRGLENIK-------FMDT 85 Query: 92 PGYG--YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG PKK ++ ++S + ++ L + +++ F+ ++K Sbjct: 86 PGLNDPNDENPKKTLE---------FVQKSDV-VLFFLNAAGTVFSESEKEKFNEIEKHN 135 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 IVL KID A E + I+ + + +VIP SS + +++L+K IL Sbjct: 136 KDILIVLNKID------AAEDVPSIVKFIKRHTASKYKVIPISSKTEENLDLLKKEIL 187 >gi|229815385|ref|ZP_04445720.1| hypothetical protein COLINT_02432 [Collinsella intestinalis DSM 13280] gi|229809165|gb|EEP44932.1| hypothetical protein COLINT_02432 [Collinsella intestinalis DSM 13280] Length = 445 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 19/163 (11%) Query: 21 IGLLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFF 71 + LLP+ E +A GR N GKSSL N ++ + + SN G T+ ++ Sbjct: 163 VSLLPEDAGDEDDEPDTLRVAIIGRPNAGKSSLFNKMIG-NDRSIVSNIAGTTRDAIDTV 221 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 V +D + +VD G +N++ + +VR L L++D Sbjct: 222 VERDGKRYR-------MVDTAGIRKKSTVYENIEYYS--MVRGLRAIDRADVALLVVDAS 272 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT 174 GV + DQ V + ++ + ++L K D L +E + +T Sbjct: 273 AGVTEQDQKVANLAIERGCALVVLLNKWDLLKDDYEREAVMET 315 >gi|206975796|ref|ZP_03236707.1| tRNA modification GTPase TrmE [Bacillus cereus H3081.97] gi|217962976|ref|YP_002341554.1| tRNA modification GTPase TrmE [Bacillus cereus AH187] gi|222098961|ref|YP_002533019.1| tRNA modification gtpase trme [Bacillus cereus Q1] gi|229142233|ref|ZP_04270757.1| tRNA modification GTPase mnmE [Bacillus cereus BDRD-ST26] gi|229199692|ref|ZP_04326335.1| tRNA modification GTPase mnmE [Bacillus cereus m1293] gi|206745890|gb|EDZ57286.1| tRNA modification GTPase TrmE [Bacillus cereus H3081.97] gi|217065834|gb|ACJ80084.1| tRNA modification GTPase TrmE [Bacillus cereus AH187] gi|221243020|gb|ACM15730.1| tRNA modification GTPase TrmE [Bacillus cereus Q1] gi|228583787|gb|EEK41962.1| tRNA modification GTPase mnmE [Bacillus cereus m1293] gi|228641251|gb|EEK97558.1| tRNA modification GTPase mnmE [Bacillus cereus BDRD-ST26] Length = 458 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D + +E A VI TS ++ +GI+ L AI Sbjct: 330 IVIVNKTDLPQAIDMERVIE---------LAAGNRVITTSLIEEQGIDELETAI 374 >gi|162606364|ref|XP_001713212.1| hypothetical protein GTHECHR2139 [Guillardia theta] gi|12580678|emb|CAC26996.1| hypothetical protein [Guillardia theta] Length = 496 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 7/154 (4%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +P L ++ +++ G+ NVGKS+ +N L+ + + S+ PG T V S Sbjct: 223 LPNSKKLSESYTTKVSIIGKPNVGKSTFVNKLLGQYR-SIVSDTPGTTSDS---VDSYIS 278 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 KN +D G ++ + ++ + ++ R L CV +ID +G+ Sbjct: 279 GGKN-CNVYNFIDTAGIKRKKSIEFGIEYF--MVNRTLKSVQKSECVLFMIDINNGITDQ 335 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL 171 D + + K+ I+L K DK+ +++TL Sbjct: 336 DVKISDIIVKENKCCVILLNKWDKIKKKMSKQTL 369 >gi|329766983|ref|ZP_08258511.1| GTP-binding protein Era [Gemella haemolysans M341] gi|328837708|gb|EGF87333.1| GTP-binding protein Era [Gemella haemolysans M341] Length = 302 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 17/171 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR N GKS+L+N ++ +K +A S+ P T+++ V D N + +D Sbjct: 11 VTIIGRPNAGKSTLLNNILQQK-IAIMSDKPQTTRNIINGVYTD------NDSQIVFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + + + S + VYL+I+ DQ + + + + V Sbjct: 64 PG---IHKPKHRLGDYMMKLASSAIQESEI--VYLIINASEKFGPGDQHLINIVKELKVP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ KID +SP + +E K L E++P S++K ++ L Sbjct: 119 TFLLINKIDLISPEQLIQIIEFYKDL-----YDFVEIVPISALKSINVDNL 164 >gi|284053846|ref|ZP_06384056.1| tRNA modification GTPase TrmE [Arthrospira platensis str. Paraca] Length = 469 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 19/181 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ + + + +P L D Sbjct: 228 VAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-DT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G + R + V +DC G + + +++ + + + Sbjct: 281 AGI---RKSDDKVEQIG--VERSQIAAQSADLVLFTLDCEKGWTEGENEIYQQVKNRPII 335 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVKRKGIEVLRKAILETI 210 +V+ K D+LS +AQ LE + I N P +I T++ +GI L +IL + Sbjct: 336 --VVMNKSDRLS--SAQ--LENLRQAIINKLDIKPSLIIATAATLNQGITDLETSILNAV 389 Query: 211 N 211 + Sbjct: 390 H 390 >gi|157804058|ref|YP_001492607.1| GTP-binding protein EngA [Rickettsia canadensis str. McKiel] gi|166225851|sp|A8EZN9|DER_RICCK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157785321|gb|ABV73822.1| GTP-binding protein EngA [Rickettsia canadensis str. McKiel] Length = 447 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 24/136 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N L RK A N PG T+ + +++ K L+D Sbjct: 6 IALVGRPNVGKSTLFNRLSIRKK-AIVHNLPGVTRD------RKYTDGKIGSCEFLLIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE------RSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG ++N +S + VR + + + L C ++DCR G+ D+ + SF+ Sbjct: 59 PGL------EENPNS---MSVRLMEQTTKAILEADLIC--FMVDCRSGILPDDKLLSSFI 107 Query: 146 DKKAVSYQIVLTKIDK 161 K +V+ K +K Sbjct: 108 RKYNKPAILVVNKCEK 123 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I SGR N GKS+ IN L+N + L T G T+ + D+ KNN + L+D Sbjct: 181 QIVISGRPNAGKSTFINALINDERLL-TGPEAGITRE---SIEIDWQ-YKNN--HIKLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +++D ++ V L+ID +KQ D ++ S++ + Sbjct: 234 TAGLRKKSTITESLDKLSA--SDAINSIKFANTVILIIDALSPLKQQDLNIASYVANEGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLRKAIL 207 S IV+ K D + + + E+ Y I + V+ S++ ++ IE + A L Sbjct: 292 SIVIVVNKWDLVKESEKEAFQEEFYYQINTHLPQIKGVSVLFISAINKQNIEQVLDACL 350 >gi|319941508|ref|ZP_08015835.1| GTP-binding protein engA [Sutterella wadsworthensis 3_1_45B] gi|319804982|gb|EFW01821.1| GTP-binding protein engA [Sutterella wadsworthensis 3_1_45B] Length = 451 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 17/182 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ +GR N GKS+LIN LV + + + PG T+ + DF + P LVD Sbjct: 184 KVTLAGRPNAGKSTLINALVGEERVI-AFDMPGTTRDA---IKIDFEY--DGRP-YELVD 236 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + +V+ L V L++D + GV + D + ++ + Sbjct: 237 TAGLRKKGRVFEAVEKFS--VVKTLQAIEDANVVILVVDAKEGVSEGDAHIAGYVLEAGR 294 Query: 151 SYQIVLTKIDKLSPTTAQE---TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K D L + LE+ + +R +I S++KR G+ L +A+ Sbjct: 295 ALVVAVNKWDLLDSYERERFNLDLERKLHFLR-----WARMIRISALKRNGLNHLMRAVD 349 Query: 208 ET 209 E Sbjct: 350 EA 351 >gi|325272131|ref|ZP_08138563.1| GTP-binding protein Der [Pseudomonas sp. TJI-51] gi|324102727|gb|EGC00142.1| GTP-binding protein Der [Pseudomonas sp. TJI-51] Length = 487 Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + + PG T+ + ++P + + Sbjct: 186 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDQPGTTRD-SIYIP-----FERD 238 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 296 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + + I L K D + P Sbjct: 297 GFALEAGRAIVIALNKWDGMQP 318 >gi|330719101|ref|ZP_08313701.1| GTP-binding protein Der [Leuconostoc fallax KCTC 3537] Length = 436 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 12/150 (8%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSS++N ++ + + S+ G T+ D + + +V Sbjct: 175 IRFSIIGRPNVGKSSIVNAILGEERVI-VSDIEGTTRD-----AIDSRFMTADGDEFVMV 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G +N + + ++R L + ++ID G+++ D+ V F + Sbjct: 229 DTAGMRKRGKVYENTEKYS--VLRALKAVDESNVILMVIDAEAGIREQDKHVAGFAHEAG 286 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 S IV+ K D + T +T+++ + IR Sbjct: 287 RSMIIVVNKWDAIDKNT--KTMQEFEETIR 314 >gi|171463406|ref|YP_001797519.1| small GTP-binding protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238689056|sp|B1XU78|DER_POLNS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|171192944|gb|ACB43905.1| small GTP-binding protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 454 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 15/162 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +IA GR NVGKS+LIN L+ + + + PG T+ VP + +N P + L Sbjct: 180 PMKIAVVGRPNVGKSTLINKLIGEERVI-AFDMPGTTRDA-IEVPFE----RNGKPYI-L 232 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + ++ + +V+ L + V L++D + + + D + F+ + Sbjct: 233 VDTAGLRRRGKVFEAIEKFS--VVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFIVEA 290 Query: 149 AVSYQIVLTKIDKLSPTTAQ----ETLEKTKYLIRNYPTAHP 186 + + + K D + + E +K ++L ++ HP Sbjct: 291 GRALVVAVNKWDGIDTYVKERARLEIAQKLRFL--DFANVHP 330 >gi|58337483|ref|YP_194068.1| GTP-binding protein Era [Lactobacillus acidophilus NCFM] gi|81311455|sp|Q5FJT7|ERA_LACAC RecName: Full=GTPase Era gi|58254800|gb|AAV43037.1| GTP-binding protein [Lactobacillus acidophilus NCFM] Length = 301 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 18/175 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRN------RISGIYTSDRMQVIFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + + LS + + V +++ K DQ + L + V Sbjct: 64 PG---IFKPHSKLDDY--MDKASLSSLNDVDLVLFMVEPEDMGKG-DQYIADLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+D++ P ++ L E++P S+ + GI+ L I Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----DGFKEILPISATQGIGIDDLLNTI 167 >gi|15223206|ref|NP_172317.1| GTP-binding family protein [Arabidopsis thaliana] gi|6664306|gb|AAF22888.1|AC006932_5 T27G7.9 [Arabidopsis thaliana] gi|66792666|gb|AAY56435.1| At1g08410 [Arabidopsis thaliana] gi|133778880|gb|ABO38780.1| At1g08410 [Arabidopsis thaliana] gi|332190165|gb|AEE28286.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] Length = 589 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV +K TS PG+T+H + D + L D Sbjct: 311 VGFVGYPNVGKSSTINALVGQKRTGVTS-TPGKTKHFQTLIISD---------ELMLCDC 360 Query: 92 PG 93 PG Sbjct: 361 PG 362 >gi|226946062|ref|YP_002801135.1| GTP-binding protein EngA [Azotobacter vinelandii DJ] gi|259645867|sp|C1DE52|DER_AZOVD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226720989|gb|ACO80160.1| Small GTP-binding protein EngA [Azotobacter vinelandii DJ] Length = 491 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + A T + ++P + K Sbjct: 189 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAG--TTRDSIYIPFERDEDKYT 246 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L A V G + K +V V+ L V ++D R GV + D ++ Sbjct: 247 LIDTAGVRRRGKIFEAVEKFSV-------VKTLQAIQDANVVIFVMDAREGVVEHDLNLL 299 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F+ + + I L K D + P Sbjct: 300 GFVLETGRALVIALNKWDGMEP 321 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A + G T+ + + K ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKTRD-AIVAEYAGLTRD------RQYGEAKWQGRTYIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ +D+ + + L V ++D R G+ DQ + L K+ Sbjct: 56 DTGGIS---GDEEGIDA--KMAEQSLQAIEEADAVLFMVDSRAGMTAADQLIAEHLRKRN 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K+D + P A+ P + +P ++ +GI + +A L Sbjct: 111 KRSFLVANKVDTVDPDIARAEFS---------PLGLGDALPIAAAHGRGINAMLEAAL 159 >gi|313496860|gb|ADR58226.1| SelB [Pseudomonas putida BIRD-1] Length = 640 Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 19/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSN-APGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +G + GK++L+ L + R A G T L + + L P +D Sbjct: 3 VGTAGHIDHGKTALLLALTGQAGDQRQEERARGMTIDLGY----RYVALSEGAPLTGFID 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ I L+ + V L++ GV ++ + ++ + Sbjct: 59 VPGHER-------------FIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGI 105 Query: 151 SYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V ++K D++ P+ E + L+ P A P SS+ +G+E LR+A+LE Sbjct: 106 PQALVAISKCDRVEPSRLAEVQMQVSELLAPGPYAGARQFPLSSISGEGVEALRQALLE 164 >gi|282857683|ref|ZP_06266893.1| small GTP-binding protein [Pyramidobacter piscolens W5455] gi|282584468|gb|EFB89826.1| small GTP-binding protein [Pyramidobacter piscolens W5455] Length = 403 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 26/189 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ I GR N GKSSL+N L + + S+ PG T + L+ P Sbjct: 7 PRSERLHIGIFGRRNSGKSSLVNALAGQAA-SIVSDVPGTTADPVY----KAMELRGVGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTL-RCVYLLIDCRHGVKQIDQDVF 142 A+ L+D G+ D GGL +R R R L+ + D + Sbjct: 62 AV-LIDTAGF----------DDEGGLGALRVAKTREAADRTDVALMVFAGAARPEDLEWV 110 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTSSVKRKGIEV 201 L K V VL KID++S ++ +R+ TA + +P S+ +G+ Sbjct: 111 GLLKSKGVPVIAVLNKIDRMSE-------DERGAALRSVKTATGLDAVPVSAANGEGVAA 163 Query: 202 LRKAILETI 210 LR+ +L + Sbjct: 164 LRETLLTAL 172 >gi|156975791|ref|YP_001446698.1| GTP-binding protein Era [Vibrio harveyi ATCC BAA-1116] gi|156527385|gb|ABU72471.1| hypothetical protein VIBHAR_03535 [Vibrio harveyi ATCC BAA-1116] Length = 320 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V + + + A+ VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGV-----DTEGDYQAI-YVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H D+ V + L K Sbjct: 82 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTND-DEMVLTKLQKSNF 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D + Q+ E +++ + +V+P S+ K IEVLRK + Sbjct: 136 PVVLCVNKVDNV-----QDRNEVMLHMMDMSKKMDFVDVVPISAKHGKNIEVLRKHV 187 >gi|118369585|ref|XP_001017996.1| hypothetical protein TTHERM_01046820 [Tetrahymena thermophila] gi|89299763|gb|EAR97751.1| hypothetical protein TTHERM_01046820 [Tetrahymena thermophila SB210] Length = 1175 Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 14/136 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G S VGKSSLI L K L R + +++ F P +++++ N +D Sbjct: 315 IIIIGESQVGKSSLIEQLTEYKGL-RGDSTNSKSRFCEIF-PVIYNDVRYN-----FIDT 367 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL-----IDCRHGVKQIDQDVFSFLD 146 PGYG + D++ LI +L L L I CR QI + F+ Sbjct: 368 PGYGGTESRSSYFDNF-KLIADFLRRNKILEFKILFVSNAEIQCRDNTDQIVKQFLLFI- 425 Query: 147 KKAVSYQIVLTKIDKL 162 ++ +I L DKL Sbjct: 426 QELFDQEITLVDSDKL 441 >gi|88807391|ref|ZP_01122903.1| possible GTPase [Synechococcus sp. WH 7805] gi|88788605|gb|EAR19760.1| possible GTPase [Synechococcus sp. WH 7805] Length = 438 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 29/176 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT-QHLNFFVPKDFSNLKNNLPAMALVD 90 IA GR VGKSSL+N LV ++L T A G T Q + P L+ A+ LVD Sbjct: 52 IAVFGRVGVGKSSLVNALVG-QSLMATDVAHGCTRQQQSTPWPTPVPGLQ----AVDLVD 106 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG P + L+ R L +L+ + Q++ D + L K Sbjct: 107 TPGIDEVNGPARA----------RLAGRVALNADLVLLVLDGDITQVELDALTVLQNKGK 156 Query: 151 SYQIVLTKID-----KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 VL + D +L+P A + R P P + ++ R+ +++ Sbjct: 157 PVITVLNRSDCWPEEELAPLLA--------SIKRRLPNGLPGPVVAAAAPRQAVQL 204 >gi|283955141|ref|ZP_06372643.1| GTPase family protein [Campylobacter jejuni subsp. jejuni 414] gi|283793354|gb|EFC32121.1| GTPase family protein [Campylobacter jejuni subsp. jejuni 414] Length = 460 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 198 VGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESIVHKD--------KVIEFVD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + + K + Sbjct: 250 TAGI-RKRGKIQGLERFA--LNRTEKILSHSQIALLVLDAHEGFNELDERIAGLVAKHYL 306 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK T + L++ K+L A+ VI S++ K + VL I Sbjct: 307 GVIIVLNKWDKSKMDFDKTVKELRLDRFKFL------AYAPVISVSALNGKRVHVLLDKI 360 Query: 207 LE 208 L+ Sbjct: 361 LQ 362 >gi|326203513|ref|ZP_08193377.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782] gi|325986333|gb|EGD47165.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782] Length = 298 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 23/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N + +K +A S+ P T++ V + N + L+D Sbjct: 8 VSVIGRPNVGKSTLLNTITGQK-IAIMSDKPQTTRNTIRGV------ITNKECQLILIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V SE + V L++ D ++ L + Sbjct: 61 PGI---HKPKTKL---GEYMVNVASETIKEVDLVLFLVEANAQPGAQDINIIQQLKQVKT 114 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K+D +S EK +I +Y +IP S++K GI+++ K L+ Sbjct: 115 PVFLILNKVDLVSK-------EKLLAIIDSYSKLMNFKAIIPISALKNDGIDIILKEALD 167 Query: 209 TI 210 I Sbjct: 168 LI 169 >gi|239616622|ref|YP_002939944.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1] gi|259645881|sp|C5CIV1|DER_KOSOT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|239505453|gb|ACR78940.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1] Length = 442 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 23/184 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ N GKSSL N +V + + + PG T +D + + M + Sbjct: 183 KVAIIGKPNAGKSSLFNSIVG-SDRSLVTEIPGTT--------RDMVDETIEIDGMPVTF 233 Query: 91 MPGYGYARAPK---KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 + G R K KNV+ + + ERS + C+ L+ID G+ DQ + ++K Sbjct: 234 IDTAGMRRKSKVGVKNVEYYSVMRAVDAIERSDI-CI-LVIDATLGISNQDQRIAGLVEK 291 Query: 148 KAVSYQIVLTKIDKLSPTTAQETL---EKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 + V K D L+ + L E+ Y I P V+ TS+ + GI E+L Sbjct: 292 RGKGIITVFNKSDLLNEKHKESLLSSFERELYFIDYSP-----VVFTSATEGFGIDELLD 346 Query: 204 KAIL 207 K L Sbjct: 347 KLFL 350 >gi|254932647|ref|ZP_05266006.1| GTP-binding protein Era [Listeria monocytogenes HPB2262] gi|293584206|gb|EFF96238.1| GTP-binding protein Era [Listeria monocytogenes HPB2262] gi|328474974|gb|EGF45768.1| GTPase Era [Listeria monocytogenes 220] gi|332311903|gb|EGJ24998.1| GTP-binding protein Era [Listeria monocytogenes str. Scott A] Length = 301 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ L+ + +Y +ID G + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +++ KID ++P + +E+ + L+ E+IP S+++ Sbjct: 117 PVFLLINKIDLIAPEDLFKLIEQYRDLM-----DFDEIIPISALQ 156 >gi|253581692|ref|ZP_04858916.1| GTP binding protein [Fusobacterium varium ATCC 27725] gi|251836041|gb|EES64578.1| GTP binding protein [Fusobacterium varium ATCC 27725] Length = 297 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 23/150 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN LV+ K +A S+ G T+ N K NL +N +D Sbjct: 6 IAVVGRPNVGKSTLINKLVSEK-VAIVSDKAGTTRD-NI---KGILNLNDN--QYIFIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFS-FL 145 PG A+ L+ Y++ + + + L+D + DQ V + Sbjct: 59 PGIHKAKH----------LLGEYMTNSAIRVLKDVDVILFLLDGSQEISTGDQFVMERVM 108 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + K +V+ KIDKLS E+ K Sbjct: 109 EAKKTPRILVINKIDKLSDEQLVAKREEVK 138 >gi|295114611|emb|CBL35458.1| iron-only hydrogenase maturation protein HydF [butyrate-producing bacterium SM4/1] Length = 432 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 14/137 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I+F G N GKSSL+N ++LA S+ G T V K L L Sbjct: 7 PSAERVHISFFGCRNAGKSSLLNAFTG-QDLAVVSDVKGTTTDP---VKKSMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI-DCRHGVKQIDQDVFS 143 ++D PG + S GG VR + + + +L+ D + G+++ D+++ + Sbjct: 61 PAVIIDTPGI-------DDEGSLGGRRVRKTRQILNMTDIAVLVADSQTGIRKEDRELAA 113 Query: 144 FLDKKAVSYQIVLTKID 160 +K V Y + K D Sbjct: 114 LFQEKEVPYVVAFNKCD 130 >gi|304317178|ref|YP_003852323.1| ribosome-associated GTPase EngA [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778680|gb|ADL69239.1| ribosome-associated GTPase EngA [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 439 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 11/133 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N + ++ ++ + PG T+ ++ + LV Sbjct: 4 PMVGIVGRPNVGKSTLFNKITGQR-ISIVEDKPGVTRDRIYYETEWLGR------KFILV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + ++ + T+ + +ID + G+ +D+D+ + L K Sbjct: 57 DTGGL----EPDSEDEFFSKIRMQVEAALKTVDLILFVIDAKDGLSPVDEDIANMLRKSH 112 Query: 150 VSYQIVLTKIDKL 162 +VL K+D Sbjct: 113 KKVILVLNKVDSF 125 Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 17/125 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 +I F G+ NVGKSSL+N ++ + A S+ PG T+ L+ + KD N K ++ Sbjct: 178 KICFIGKPNVGKSSLVNKILGEER-AIVSDIPGTTRDALDTYFEKD--NKK-----YVII 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDV--FSFL 145 D G + ++ + ++R LS +RS + C+ L+ID G + D + ++F Sbjct: 230 DTAGMRKKGRIEDKIERYS--VLRALSAIDRSDI-CI-LVIDATEGPTEQDTKIAGYAFE 285 Query: 146 DKKAV 150 KA+ Sbjct: 286 QNKAI 290 >gi|237713435|ref|ZP_04543916.1| tRNA modification GTPase TrmE [Bacteroides sp. D1] gi|262407222|ref|ZP_06083770.1| tRNA modification GTPase TrmE [Bacteroides sp. 2_1_22] gi|294647342|ref|ZP_06724935.1| tRNA modification GTPase TrmE [Bacteroides ovatus SD CC 2a] gi|294809037|ref|ZP_06767759.1| tRNA modification GTPase TrmE [Bacteroides xylanisolvens SD CC 1b] gi|229446417|gb|EEO52208.1| tRNA modification GTPase TrmE [Bacteroides sp. D1] gi|262354030|gb|EEZ03122.1| tRNA modification GTPase TrmE [Bacteroides sp. 2_1_22] gi|292637301|gb|EFF55726.1| tRNA modification GTPase TrmE [Bacteroides ovatus SD CC 2a] gi|294443762|gb|EFG12507.1| tRNA modification GTPase TrmE [Bacteroides xylanisolvens SD CC 1b] Length = 465 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 16/188 (8%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDVHGTTRD----VIEDTINIG 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V ++D + QI+Q Sbjct: 267 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDAVNAASQIEQL 319 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + + IV+ L +E L L++++P E I S+ +R+ Sbjct: 320 SEKIIPRCEGKHLIVVFNKADLIEDKQKENL---LSLLKDFPKESTESIFISAKQRENTS 376 Query: 201 VLRKAILE 208 L+K +++ Sbjct: 377 ELQKMLID 384 >gi|288871688|ref|ZP_06118601.2| GTP-binding protein [Clostridium hathewayi DSM 13479] gi|288862428|gb|EFC94726.1| GTP-binding protein [Clostridium hathewayi DSM 13479] Length = 407 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 27/165 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GR N GKSS++N V + L+ S+ G T V K L + + ++D Sbjct: 15 IGFFGRRNAGKSSIVNA-VTGQELSVVSDIKGTTTDP---VYKSMELLP--MGPVVIIDT 68 Query: 92 PGYGYARAPKKNVDSWGGL-IVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDK 147 PG+ D G L +R R L C L++D G + D+++ S + Sbjct: 69 PGF----------DDEGALGELRVKKTREILNRADCAVLVVDSLQGKTKADEELLSLFKE 118 Query: 148 KAVSYQIVLTKIDKL-------SPTTAQETLEKTKYLIRNYPTAH 185 K + + I K D L TA+E E+ + + H Sbjct: 119 KEIPFLIAYNKWDLLEKNESHGGQCTAEELTEENGITVSAETSYH 163 >gi|56965874|ref|YP_177608.1| tRNA modification GTPase TrmE [Bacillus clausii KSM-K16] gi|81821939|sp|Q5WAG3|MNME_BACSK RecName: Full=tRNA modification GTPase mnmE gi|56912120|dbj|BAD66648.1| tRNA modification GTPase [Bacillus clausii KSM-K16] Length = 458 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV+ A ++ PG T+ +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLMNSLVHEAK-AIVTDIPGTTRD----TLEEYVNVR-GVP-LRLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R + L+++ + + D+ +F + K + Sbjct: 277 GI---RETEDIVERIG--VERSRQALKEADLILLVLNYAEKLSKEDEALFEAV--KGLDV 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ KID+ T + +E+ + L P V+ TS ++ +G++ L +AI Sbjct: 330 VVIVNKIDQ----TGRIDMERVRQLAGENP-----VVATSFLQEEGVDQLEEAI 374 >gi|303233733|ref|ZP_07320387.1| GTP-binding protein Era [Finegoldia magna BVS033A4] gi|302495167|gb|EFL54919.1| GTP-binding protein Era [Finegoldia magna BVS033A4] Length = 294 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 23/172 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GRSNVGKS+L+N ++ K L S+ P T++ + D N+ A+ L D Sbjct: 7 VSVIGRSNVGKSTLLNRVLGEK-LTIISDKPQTTRNKIQLIYTD-----ENMQAIFL-DT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + PK + + ++ +S + + + ++D + ++D ++ L + V+ Sbjct: 60 PG---IQTPKNKLGDY--MLKVSMSTLNEVDVITYIVDTTEEIGKLDSEIIEKL--RLVN 112 Query: 152 YQIVL--TKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIE 200 +I+L KIDK++ E +E TK I ++IP S++ +E Sbjct: 113 TKIILLINKIDKIASDKVDELVEMYTKVGI------FEQIIPISALNGDNVE 158 >gi|301312102|ref|ZP_07218024.1| ribosome-associated GTPase EngA [Bacteroides sp. 20_3] gi|300830204|gb|EFK60852.1| ribosome-associated GTPase EngA [Bacteroides sp. 20_3] Length = 437 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 35/167 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQH----LNFFVPKDFSNLK 80 P IA GR N GKSSLIN + ++A T+ T++ LNF+ Sbjct: 176 PRIAIIGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFY--------- 226 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVD G + K N D ++R + L++D G++ D + Sbjct: 227 -------LVDTA--GIRKKGKVNEDLEYYSVIRSIRAIENSDVCVLMLDATRGIESQDMN 277 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +FS + K + + K D + +K++ +I +Y TA E Sbjct: 278 IFSLVQKNKKGLVVCVNKWDLIE--------DKSQKVIDSYTTAIRE 316 >gi|224500518|ref|ZP_03668867.1| GTP-binding protein Era [Listeria monocytogenes Finland 1988] Length = 299 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ L+ + +Y +ID G + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +++ KID ++P + +E+ + L+ E+IP S+++ Sbjct: 117 PVFLLINKIDLIAPEDLFKLIEQYRDLM-----DFDEIIPISALQ 156 >gi|116328637|ref|YP_798357.1| GTP-binding protein EngA [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330706|ref|YP_800424.1| GTP-binding protein EngA [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281540|sp|Q04TV4|DER_LEPBJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|122283577|sp|Q04ZS1|DER_LEPBL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|116121381|gb|ABJ79424.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124395|gb|ABJ75666.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 487 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 33/193 (17%) Query: 25 PKAGP----PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNL 79 P+ P P ++ GR NVGKS+L N L+ +K LA T + PG T+ L+ V ++ +L Sbjct: 19 PRKAPGEKIPVVSIVGRQNVGKSTLFNSLL-KKKLAITEDYPGVTRDVLSARVYQEEKDL 77 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIV----RYLSERSTLRCVYLLIDCRHGVK 135 L D PG +N DS I+ R L+E + L+D ++ V Sbjct: 78 D-----FYLCDTPGLDI-----ENPDSLSQSILEAAYRQLNESD---VIIFLLD-KNLVT 123 Query: 136 QIDQDVFSFLDKK--AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + +L KK V I+ ++K + LE+ Y PEV+P S+ Sbjct: 124 VADHTLLDYLRKKYGPVDKPIIYC-VNKADKELDEFDLEEF------YRMGLPEVLPISA 176 Query: 194 VKRKGIEVLRKAI 206 RK + +L + I Sbjct: 177 TGRKNLGLLLEKI 189 >gi|16803502|ref|NP_464987.1| GTP-binding protein Era [Listeria monocytogenes EGD-e] gi|46907690|ref|YP_014079.1| GTP-binding protein Era [Listeria monocytogenes serotype 4b str. F2365] gi|47093486|ref|ZP_00231249.1| GTP-binding protein Era [Listeria monocytogenes str. 4b H7858] gi|47095413|ref|ZP_00233023.1| GTP-binding protein Era [Listeria monocytogenes str. 1/2a F6854] gi|224501598|ref|ZP_03669905.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-561] gi|226224063|ref|YP_002758170.1| GTP binding protein [Listeria monocytogenes Clip81459] gi|254824479|ref|ZP_05229480.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-194] gi|254827750|ref|ZP_05232437.1| GTP-binding protein Era [Listeria monocytogenes FSL N3-165] gi|254829779|ref|ZP_05234434.1| GTP-binding protein Era [Listeria monocytogenes 10403S] gi|254852087|ref|ZP_05241435.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-503] gi|254898372|ref|ZP_05258296.1| GTP-binding protein Era [Listeria monocytogenes J0161] gi|254912136|ref|ZP_05262148.1| GTP-binding protein Era [Listeria monocytogenes J2818] gi|254936464|ref|ZP_05268161.1| GTP-binding protein Era [Listeria monocytogenes F6900] gi|255521277|ref|ZP_05388514.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-175] gi|284801849|ref|YP_003413714.1| GTP-binding protein Era [Listeria monocytogenes 08-5578] gi|284994991|ref|YP_003416759.1| GTP-binding protein Era [Listeria monocytogenes 08-5923] gi|300765605|ref|ZP_07075584.1| GTP-binding protein Era [Listeria monocytogenes FSL N1-017] gi|21263579|sp|Q8Y750|ERA_LISMO RecName: Full=GTPase Era gi|67460115|sp|Q71ZK8|ERA_LISMF RecName: Full=GTPase Era gi|259645949|sp|C1KVA9|ERA_LISMC RecName: Full=GTPase Era gi|16410891|emb|CAC99540.1| lmo1462 [Listeria monocytogenes EGD-e] gi|46880959|gb|AAT04256.1| GTP-binding protein Era [Listeria monocytogenes serotype 4b str. F2365] gi|47016234|gb|EAL07157.1| GTP-binding protein Era [Listeria monocytogenes str. 1/2a F6854] gi|47018162|gb|EAL08932.1| GTP-binding protein Era [Listeria monocytogenes str. 4b H7858] gi|225876525|emb|CAS05234.1| Putative GTP binding protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600129|gb|EEW13454.1| GTP-binding protein Era [Listeria monocytogenes FSL N3-165] gi|258605386|gb|EEW17994.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-503] gi|258609056|gb|EEW21664.1| GTP-binding protein Era [Listeria monocytogenes F6900] gi|284057411|gb|ADB68352.1| GTP-binding protein Era [Listeria monocytogenes 08-5578] gi|284060458|gb|ADB71397.1| GTP-binding protein Era [Listeria monocytogenes 08-5923] gi|293590107|gb|EFF98441.1| GTP-binding protein Era [Listeria monocytogenes J2818] gi|293593717|gb|EFG01478.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-194] gi|300513706|gb|EFK40774.1| GTP-binding protein Era [Listeria monocytogenes FSL N1-017] gi|328465505|gb|EGF36734.1| GTPase Era [Listeria monocytogenes 1816] Length = 301 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ L+ + +Y +ID G + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +++ KID ++P + +E+ + L+ E+IP S+++ Sbjct: 117 PVFLLINKIDLIAPEDLFKLIEQYRDLM-----DFDEIIPISALQ 156 >gi|313235763|emb|CBY11213.1| unnamed protein product [Oikopleura dioica] Length = 538 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 21/108 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ F G +NVGKSS++N LV K+ + S PG T+ L + N + LVD Sbjct: 313 KVGFVGHTNVGKSSIMNALVGEKHFS-MSIRPGHTKELQTW---------NVSEHVQLVD 362 Query: 91 MPGYGYARAPKKNVDSWGGL-----------IVRYLSERSTLRCVYLL 127 PG + + + GL ++ YL+ER L + L Sbjct: 363 SPGIIFPSTVSRQLQILSGLFPVDQVREPYSVIGYLAERVNLVAAFHL 410 >gi|302878421|ref|YP_003846985.1| GTP-binding protein Era [Gallionella capsiferriformans ES-2] gi|302581210|gb|ADL55221.1| GTP-binding protein Era [Gallionella capsiferriformans ES-2] Length = 303 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 29/181 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IA GR NVGKS+L+N L+ +K ++ TS T+H +N D S VD Sbjct: 18 IAIVGRPNVGKSTLLNHLIGQK-ISITSRKAQTTRHRINGIYTDDHSQF-------VFVD 69 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV----YLLIDCRHGVKQIDQDVFSFL- 145 PG+ K++++ + R ++ S+LR V Y+L R+ + DQ+V L Sbjct: 70 TPGFQL-----KHLNALNRGMNRVVT--SSLRDVQVVMYVLEALRYDER--DQEVLKLLP 120 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 D + V +V+ KID+++ + + + + +++ A +++P S+ K IE LR Sbjct: 121 DNRPV--LLVINKIDEVADKG--QLFDFAERIAKDFKFA--DIVPVSAKFGKKIEELRDT 174 Query: 206 I 206 + Sbjct: 175 L 175 >gi|77165915|ref|YP_344440.1| GTP-binding protein Era [Nitrosococcus oceani ATCC 19707] gi|76884229|gb|ABA58910.1| GTP-binding protein Era [Nitrosococcus oceani ATCC 19707] Length = 306 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 32/187 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N ++ +K ++ TS P T+H K + ++ VD Sbjct: 18 IAIIGRPNVGKSSLLNRILGQK-ISITSRRPQTTRH-RILGIKTLAGIQ-----AIYVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVK--QIDQDVFSFLDK 147 PG+ D L+ RYL+ STL V L++ + + D+ + L + Sbjct: 71 PGFQ---------DKERRLMNRYLNRAIDSTLEEVDLILFVIEAFQFTKDDEWILQRLRR 121 Query: 148 KAVSYQIVLTKIDKL----SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 AV +VL K+D++ S A TL K + +IP S+ K + VL Sbjct: 122 CAVPIVLVLNKVDRIIDKKSLLPAIATLSKKR--------EFAAIIPVSAWKGDNVAVLE 173 Query: 204 KAILETI 210 + E + Sbjct: 174 SKVAELL 180 >gi|320353154|ref|YP_004194493.1| ribosome-associated GTPase EngA [Desulfobulbus propionicus DSM 2032] gi|320121656|gb|ADW17202.1| ribosome-associated GTPase EngA [Desulfobulbus propionicus DSM 2032] Length = 445 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD-FSNLKNNLPAMALVD 90 IAF GR NVGKSS++N ++ ++ + + A ++ V +D ++ L L+D Sbjct: 183 IAFLGRPNVGKSSMVNAIIGQERMVVSDIAGTTRDSVDTLVTRDPYTYL--------LID 234 Query: 91 MPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G R K D +++ L +LID G+ + D V + + Sbjct: 235 TAGI---RRKGKTTDKLEKFSVLKALKALGRCDIALVLIDAEEGITEQDTKVIGYTQDQG 291 Query: 150 VSYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +++ K D K ++ +++ + I+ P A V+ S++ GI+ L Sbjct: 292 RALIVLINKWDLIKDDKKRQEQLMQEVEIAIKFIPFA--PVLKVSALTGTGIKRL 344 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 22/134 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N +V R++ A PG T+ + ++ + LVD Sbjct: 9 VALIGRPNVGKSTLFNRMVKRRD-ALVDPTPGVTRD------RHYARVSWEEHPFILVDT 61 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSFLD 146 G +D I ++ ++ L ++ L+D R G+ D ++ L Sbjct: 62 GG----------IDDEDDTITNHIRHQALLAIEEADVIFFLMDGREGLTPSDIEIVDLLR 111 Query: 147 KKAVSYQIVLTKID 160 + ++ KID Sbjct: 112 RTEKKVFFIVNKID 125 >gi|237722682|ref|ZP_04553163.1| tRNA modification GTPase TrmE [Bacteroides sp. 2_2_4] gi|229448492|gb|EEO54283.1| tRNA modification GTPase TrmE [Bacteroides sp. 2_2_4] Length = 465 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 16/188 (8%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDVHGTTRD----VIEDTINIG 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V ++D + QI+Q Sbjct: 267 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDAVNAASQIEQL 319 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + + IV+ L +E L L++++P E I S+ +R+ Sbjct: 320 SEKIIPRCEGKHLIVVFNKADLIEDKQKENL---LSLLKDFPKESTESIFISAKQRENTS 376 Query: 201 VLRKAILE 208 L+K +++ Sbjct: 377 ELQKMLID 384 >gi|239616804|ref|YP_002940126.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1] gi|239505635|gb|ACR79122.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1] Length = 409 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 27/180 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +AF G+ NVGKSSLIN LV ++++ S+ PG T P S + + + +VD Sbjct: 11 LAFFGKRNVGKSSLINALVG-QDVSIVSDVPGTTTD-----PVYKSLEIHPIGPVTVVDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIV-RYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG +V G L V R L L++D R + D + F+ K + Sbjct: 65 PGV-------DDVGELGELRVKRALKAMYKADIAILVVDQRWNEYE-DWLIEQFI-KMDL 115 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + I + KID+ T+ E + YP S +K+ GIE LR+ I E + Sbjct: 116 PFVIAVNKIDQSWNTSEIEP------KVSPYPHCF-----VSGLKKTGIEDLRRLISENL 164 >gi|255014874|ref|ZP_05287000.1| GTP-binding protein EngA [Bacteroides sp. 2_1_7] gi|256840958|ref|ZP_05546465.1| ribosome-associated GTPase EngA [Parabacteroides sp. D13] gi|298375727|ref|ZP_06985683.1| ribosome-associated GTPase EngA [Bacteroides sp. 3_1_19] gi|256736801|gb|EEU50128.1| ribosome-associated GTPase EngA [Parabacteroides sp. D13] gi|298266764|gb|EFI08421.1| ribosome-associated GTPase EngA [Bacteroides sp. 3_1_19] Length = 437 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 35/167 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQH----LNFFVPKDFSNLK 80 P IA GR N GKSSLIN + ++A T+ T++ LNF+ Sbjct: 176 PRIAIIGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFY--------- 226 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVD G + K N D ++R + L++D G++ D + Sbjct: 227 -------LVDTA--GIRKKGKVNEDLEYYSVIRSIRAIENSDVCVLMLDATRGIESQDMN 277 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +FS + K + + K D + +K++ +I +Y TA E Sbjct: 278 IFSLVQKNKKGLVVCVNKWDLIE--------DKSQKVIDSYTTAIRE 316 >gi|239501067|ref|ZP_04660377.1| GTP-binding protein Era [Acinetobacter baumannii AB900] Length = 342 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L +ID H Q D V L Sbjct: 95 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDA-HKWTQNDDLVLEKLKNA 146 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K D L + + + N+ E+IP S+++ +E L + I + Sbjct: 147 DMPVILVINKADTFGDKREILPLIQERAKLMNF----AEIIPVSALRGANLEHLSETIEK 202 Query: 209 TINY 212 + Y Sbjct: 203 YLPY 206 >gi|254433531|ref|ZP_05047039.1| GTP-binding protein Era [Nitrosococcus oceani AFC27] gi|207089864|gb|EDZ67135.1| GTP-binding protein Era [Nitrosococcus oceani AFC27] Length = 303 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 32/187 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N ++ +K ++ TS P T+H K + ++ VD Sbjct: 15 IAIIGRPNVGKSSLLNRILGQK-ISITSRRPQTTRH-RILGIKTLAGIQ-----AIYVDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVK--QIDQDVFSFLDK 147 PG+ D L+ RYL+ STL V L++ + + D+ + L + Sbjct: 68 PGFQ---------DKERRLMNRYLNRAIDSTLEEVDLILFVIEAFQFTKDDEWILQRLRR 118 Query: 148 KAVSYQIVLTKIDKL----SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 AV +VL K+D++ S A TL K + +IP S+ K + VL Sbjct: 119 CAVPIVLVLNKVDRIIDKKSLLPAIATLSKKR--------EFAAIIPVSAWKGDNVAVLE 170 Query: 204 KAILETI 210 + E + Sbjct: 171 SKVAELL 177 >gi|83815424|ref|YP_444485.1| Era/ThdF family GTP-binding protein [Salinibacter ruber DSM 13855] gi|83756818|gb|ABC44931.1| GTP-binding protein, Era/ThdF family [Salinibacter ruber DSM 13855] Length = 505 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 30/184 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A + PG T+ + + + + LVD Sbjct: 76 VAIVGRPNVGKSTLFNRLTGSRQ-AIVEDTPGVTRD------RVYGEAEWKGHTIPLVDT 128 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSFLD 146 GY P+ + D + R + E++ + + ++D G+ ++D+++ + L Sbjct: 129 GGY----VPRSD-DPYE----RAIREQAEIALEDADVILFVVDVTTGITEMDKEIATVLR 179 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V K D + + +++ Y EV P SS ++G++ + A+ Sbjct: 180 PTETPVMVVANKADN-----EEREWDASEF----YQLGLGEVYPVSSTNKRGVDDMMAAL 230 Query: 207 LETI 210 +E + Sbjct: 231 VEEL 234 >gi|241889088|ref|ZP_04776392.1| tRNA modification GTPase TrmE [Gemella haemolysans ATCC 10379] gi|241864337|gb|EER68715.1| tRNA modification GTPase TrmE [Gemella haemolysans ATCC 10379] Length = 460 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ ++N A ++ G T+ V +++ N+K +P + L+D Sbjct: 226 AIIGRPNVGKSSLLNNLL-QENKAIVTDIAGTTRD----VLEEYVNIK-GVP-IKLIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R V+ G + E++ L V L++ + + D+++ + K + Sbjct: 279 GI---RETDDIVEQIGVKRSKEALEKADL--VLFLLNSSEELTEDDKELLKLTEGK--TT 331 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L K+D + E +EK Y N+P +I TS KGI+ L K I Sbjct: 332 IVILNKLDLETKIDIAE-VEKLAY---NHP-----IIKTSMTTYKGIDELEKNI 376 >gi|227904119|ref|ZP_04021924.1| GTP-binding protein Era [Lactobacillus acidophilus ATCC 4796] gi|227868138|gb|EEJ75559.1| GTP-binding protein Era [Lactobacillus acidophilus ATCC 4796] Length = 308 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 18/175 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 18 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRN------RISGIYTSDRMQVIFVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + + LS + + V +++ K DQ + L + V Sbjct: 71 PG---IFKPHSKLDDY--MDKASLSSLNDVDLVLFMVEPEDMGKG-DQYIADLLKEVKVP 124 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+D++ P ++ L E++P S+ + GI+ L I Sbjct: 125 VFLVINKVDQIHPNKLLPIMDSYHKL-----DGFKEILPISATQGIGIDDLLNTI 174 >gi|254428300|ref|ZP_05042007.1| GTP-binding protein Era [Alcanivorax sp. DG881] gi|196194469|gb|EDX89428.1| GTP-binding protein Era [Alcanivorax sp. DG881] Length = 292 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 27/185 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKS+L+N L+ +K ++ TS P T+H ++ + +D + D Sbjct: 2 VSIVGRPNVGKSTLMNHLIGQK-VSITSRKPQTTRHRIHGILSRDNYQI-------IFAD 53 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSER--STLRCVYLLIDCRHGVKQI--DQDVFSFL- 145 PG + N R ++E STL V ++ +K D+ V S L Sbjct: 54 TPGIHTGQEKALN---------RAMNEAAVSTLFGVDVICMMVDAMKWTPADEHVLSLLP 104 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K V +++ K+D + A L + L YP VIP S+++ + + L KA Sbjct: 105 EKDQVPVLLIINKVDNVDDKAA--LLPHIQTLSERYP--FDAVIPVSALREQNLVELEKA 160 Query: 206 ILETI 210 +++ + Sbjct: 161 LVQRL 165 >gi|86145598|ref|ZP_01063928.1| GTP-binding protein EngA [Vibrio sp. MED222] gi|85836569|gb|EAQ54695.1| GTP-binding protein EngA [Vibrio sp. MED222] Length = 493 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + L Sbjct: 205 PIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MQRDEREYVL 257 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + +V+ L V LLID R + D + F Sbjct: 258 IDTAGVRRRKNINETVEKFS--VVKTLKAIEDANVVLLLIDARENISDQDLSLLGFALNA 315 Query: 149 AVSYQIVLTKIDKLS 163 S I + K D L Sbjct: 316 GRSIVIAVNKWDGLD 330 >gi|116670099|ref|YP_831032.1| GTP-binding protein EngA [Arthrobacter sp. FB24] gi|116610208|gb|ABK02932.1| small GTP-binding protein [Arthrobacter sp. FB24] Length = 516 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 23/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L+N ++ R+ A + PG T+ + N +N +V Sbjct: 79 PVLAIIGRPNVGKSTLVNRILGRRE-AVVEDTPGVTRDRVMYSAT--WNGRN----FTVV 131 Query: 90 DMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G+ + AR V + V V ++D G D+ V L K Sbjct: 132 DTGGWEHDARGIHARVAEQAEMAVELAD------AVLFVVDSAVGATATDEAVVKMLRKS 185 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D + TL + E P S++ +G+ L +++ Sbjct: 186 KKPVIMVANKVDDFAQEADSATL---------WGLGFGEPYPVSALHGRGVADLLDHVMD 236 Query: 209 TI 210 T+ Sbjct: 237 TL 238 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD-FSNLK 80 GL GP IA GR NVGKSSL+N L + + N G T+ P D F L Sbjct: 246 GLERSGGPRRIALIGRPNVGKSSLLNKLAGSERVV-VDNTAGTTRD-----PVDEFIELG 299 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 VD G + + D + L + E++ + V L +D Sbjct: 300 GR--TWRFVDTAGIRRRQHMAQGADFYASLRTQSALEKAEVAVVLLAVD 346 >gi|241890023|ref|ZP_04777321.1| GTP-binding protein Era [Gemella haemolysans ATCC 10379] gi|241863645|gb|EER68029.1| GTP-binding protein Era [Gemella haemolysans ATCC 10379] Length = 302 Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 17/171 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR N GKS+L+N ++ +K +A S+ P T+++ V D N + +D Sbjct: 11 VTIIGRPNAGKSTLLNNILKQK-IAIMSDKPQTTRNIINGVYTD------NDSQIVFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + + + S + VYL+I+ DQ + + + + V Sbjct: 64 PG---IHKPKHRLGDYMMKLASSAIQESEI--VYLIINASEKFGPGDQHLINIVKELKVP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ KID +SP + +E K L E++P S++K ++ L Sbjct: 119 TFLLINKIDLISPEQLIQIIEFYKDL-----YDFVEIVPISALKSINVDNL 164 >gi|51597153|ref|YP_071344.1| GTP-binding protein EngA [Yersinia pseudotuberculosis IP 32953] gi|186896248|ref|YP_001873360.1| GTP-binding protein EngA [Yersinia pseudotuberculosis PB1/+] gi|81825749|sp|Q668A3|DER_YERPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238691441|sp|B2K9P6|DER_YERPB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|51590435|emb|CAH22075.1| putative GTP-binding protein [Yersinia pseudotuberculosis IP 32953] gi|186699274|gb|ACC89903.1| small GTP-binding protein [Yersinia pseudotuberculosis PB1/+] Length = 495 Score = 40.0 bits (92), Expect = 0.24, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + ++ A ++ PG T+ + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G+ + +D + ++ +S L V ++D R G+ DQ + Sbjct: 46 EVEGHEFIVVDTGGIDGTEDGVETKMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P TA Sbjct: 106 LRSREKATFLVANKTDGIDPDTA 128 >gi|332975861|gb|EGK12739.1| GTP-binding protein Era [Desmospora sp. 8437] Length = 300 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 17/163 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ +K +A S+ P T++ K + +D Sbjct: 11 VTLIGRPNVGKSTLLNQVLGQK-VAIMSDKPQTTRN------KIRGVYTTEAEQIIFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + W R E + + L+D + G+ D+ + L Sbjct: 64 PG---IHKPKSRLGDWMVQTARETFEE--VDVILFLVDAKEGMGPGDRFIMEQLKAVKTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 +V+ KID++ P T +++ + + EV+P S++ Sbjct: 119 VFLVVNKIDQVHPDTLLPLIDRYRKTF-----SFKEVVPVSAL 156 >gi|329768091|ref|ZP_08259600.1| tRNA modification GTPase mnmE [Gemella haemolysans M341] gi|328838246|gb|EGF87858.1| tRNA modification GTPase mnmE [Gemella haemolysans M341] Length = 460 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ ++N A ++ G T+ V +++ N+K +P + L+D Sbjct: 226 AIIGRPNVGKSSLLNNLL-QENKAIVTDIAGTTRD----VLEEYVNIK-GVP-IKLIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R V+ G + E++ L V L++ + + D+++ + K + Sbjct: 279 GI---RETDDIVEQIGVKRSKEALEKADL--VLFLLNSSEELTEDDKELLKLTEGK--TT 331 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L K+D + E +EK Y N+P +I TS KGI+ L K I Sbjct: 332 IVILNKLDLETKIDIAE-VEKLAY---NHP-----IIKTSMTTYKGIDELEKNI 376 >gi|325276573|ref|ZP_08142317.1| selenocysteine-specific elongation factor [Pseudomonas sp. TJI-51] gi|324098300|gb|EGB96402.1| selenocysteine-specific elongation factor [Pseudomonas sp. TJI-51] Length = 433 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 34/176 (19%), Positives = 72/176 (40%), Gaps = 17/176 (9%) Query: 35 SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGY 94 +G + GK++L+ L + R R + + + ++ L P +D+PG+ Sbjct: 20 AGHIDHGKTALLKALTGQAGDLRQEE---RERGMTIDLGYRYAVLAEGAPLTGFIDVPGH 76 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 I L+ + V L++ GV ++ + ++ + + Sbjct: 77 ER-------------FIHNMLAGAHGIDVVLLVVAADDGVMPQTREHLAIIELLGIPQAL 123 Query: 155 V-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V ++K D++ P + + L+ P A P SS+ +GI+ LR+A+L+ Sbjct: 124 VAISKCDRVEPARLAQVQAQVSELLAPGPYAGARQFPVSSLGGEGIDALRQALLKA 179 >gi|288818281|ref|YP_003432629.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|288787681|dbj|BAI69428.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|308751878|gb|ADO45361.1| GTP-binding protein Era [Hydrogenobacter thermophilus TK-6] Length = 302 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 25/184 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA---L 88 +A G+ NVGKS+L+N ++ K ++ S PG T+ V N+P A Sbjct: 6 VAIVGKPNVGKSTLLNQIIGTK-VSIVSPKPGTTRIRILGV--------KNIPDEAQIVF 56 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D PG PK D+ G +V+ S + +ID G + D+ VFS K Sbjct: 57 LDTPGI---YRPK---DALGEAMVQVASASLQDADIILFMIDAEDGWLEDDELVFSNYIK 110 Query: 148 KAVSYQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + +V+ K+D++ + + L + +I+ + EV+P S++K I+ L K Sbjct: 111 PLAQEKHIFLVINKVDRVGHVS--QVLPLAEEIIKKH-GEFKEVLPISALKGYNIDELLK 167 Query: 205 AILE 208 IL+ Sbjct: 168 TILK 171 >gi|150009038|ref|YP_001303781.1| GTP-binding protein EngA [Parabacteroides distasonis ATCC 8503] gi|166225833|sp|A6LEP5|DER_PARD8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|149937462|gb|ABR44159.1| GTP-binding protein, Era/ThdF family [Parabacteroides distasonis ATCC 8503] Length = 437 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 35/167 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQH----LNFFVPKDFSNLK 80 P IA GR N GKSSLIN + ++A T+ T++ LNF+ Sbjct: 176 PRIAIIGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFY--------- 226 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVD G + K N D ++R + L++D G++ D + Sbjct: 227 -------LVDTA--GIRKKGKVNEDLEYYSVIRSIRTIENSDVCVLMLDATRGIESQDMN 277 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +FS + K + + K D + +K++ +I +Y TA E Sbjct: 278 IFSLVQKNKKGLVVCVNKWDLIE--------DKSQKVIDSYTTAIRE 316 >gi|189500937|ref|YP_001960407.1| GTP-binding protein EngA [Chlorobium phaeobacteroides BS1] gi|238692267|sp|B3EMI7|DER_CHLPB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189496378|gb|ACE04926.1| small GTP-binding protein [Chlorobium phaeobacteroides BS1] Length = 435 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 13/138 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSS +N L+ N S+ PG T+ S LK N + L+D Sbjct: 177 KLAIIGRPNVGKSSFVNALLG-TNRHIVSDIPGTTRDAI------DSRLKRNGKEVLLID 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDKK 148 G + ++ + + +++S RC LLID G+++ D + +K Sbjct: 230 TAGLRKRTKIDRGIEFYSSV----RTDKSIERCDVALLLIDAEQGLEKQDIKIIQMAAEK 285 Query: 149 AVSYQIVLTKIDKLSPTT 166 I++ K D + T Sbjct: 286 RKGIVILVNKWDLIEKET 303 >gi|325107065|ref|YP_004268133.1| ribosome-associated GTPase EngA [Planctomyces brasiliensis DSM 5305] gi|324967333|gb|ADY58111.1| ribosome-associated GTPase EngA [Planctomyces brasiliensis DSM 5305] Length = 450 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 16/178 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV- 89 +IA GR NVGKSS IN L + + S G T +D +++ L A V Sbjct: 185 KIAIVGRRNVGKSSFINALAQTERMI-VSEIAGTT--------RDSVDVRFELDDKAFVA 235 Query: 90 -DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG ++ +++ +G +VR V + D + ++D+ + ++K Sbjct: 236 IDTPGVRKKKSLANDIEFYG--LVRAQKSIRRANLVLMFFDATKTISKVDKQLVEEIEKY 293 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ K D L ET + +YLI+ + + +P + + K + +RK I Sbjct: 294 YKPSIFVVNKWD-LGLEGRMETEKWAEYLIKTFASMRH--VPIAFITAKDGKNIRKLI 348 >gi|254561470|ref|YP_003068565.1| GTP-binding protein [Methylobacterium extorquens DM4] gi|254268748|emb|CAX24709.1| GTP-binding protein [Methylobacterium extorquens DM4] Length = 326 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N LV A+ S + Q V + + LVD Sbjct: 36 VALIGVPNAGKSTLLNALVG----AKVSIVSRKVQTTRALV---RGIVMEGHAQIVLVDT 88 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ +D ++ S + + LLID R GV + + + L + Sbjct: 89 PGIF---APKRRLDR--AMVHSAWSGAADADAICLLIDARKGVDEEVETILRRLPEVKRP 143 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L KID ++ E + K ++ + S++K GI LRKA+ Sbjct: 144 KILILNKIDLIARERLLELVAKLNAMV-----PFEDTFLISALKGDGIADLRKAL 193 >gi|302866909|ref|YP_003835546.1| ribosome-associated GTPase EngA [Micromonospora aurantiaca ATCC 27029] gi|315506749|ref|YP_004085636.1| ribosome-associated gtpase enga [Micromonospora sp. L5] gi|302569768|gb|ADL45970.1| ribosome-associated GTPase EngA [Micromonospora aurantiaca ATCC 27029] gi|315413368|gb|ADU11485.1| ribosome-associated GTPase EngA [Micromonospora sp. L5] Length = 468 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 23/202 (11%) Query: 10 SAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 W+ LR PE GP P +A GR NVGKS+L+N ++ R+ A + PG T+ Sbjct: 6 EGWVELR-EPEADSGEPTGPQPVVAVVGRPNVGKSTLVNRIIGRRQ-AVVEDIPGVTRDR 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 VP D + N A +VD G+ P D + + T V ++ Sbjct: 64 ---VPYD---AQWNGRAFTVVDTGGW----EPDAK-DRAAAIAAQAEIAVVTADVVLFVV 112 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D G +D+ L + A +V K D TT + +E T + E Sbjct: 113 DAMVGSTDVDEAAVKMLRRSAKPVILVANKADN---TTIE--MEATSL----WSLGLGEP 163 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 P S++ +G L AIL+ + Sbjct: 164 FPVSALHGRGSGDLLDAILDAL 185 >gi|315652502|ref|ZP_07905486.1| GTP-binding protein Era [Eubacterium saburreum DSM 3986] gi|315485218|gb|EFU75616.1| GTP-binding protein Era [Eubacterium saburreum DSM 3986] Length = 304 Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 26/182 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TS+ P T++ + F++ + + +D Sbjct: 11 VALIGRPNVGKSTLMNTLIGQK-IAITSSKPQTTRNR---IQTVFTDERGQI---VFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG A+ + G +V+ +S R TLR V L L++ + + D+ +F L Sbjct: 64 PGIHKAK------NKLGEYMVK-VSTR-TLRDVDLVLWLVEPGTFIGEGDEHIFEILSDV 115 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRKAI 206 V + + K+D L + LE +I Y + +++P S++K + L K I Sbjct: 116 EVPVILAVNKVDSLK--QKDDILE----VIAKYSSKMNFADIVPVSALKGTNTDELLKVI 169 Query: 207 LE 208 + Sbjct: 170 FK 171 >gi|319900091|ref|YP_004159819.1| ribosome-associated GTPase EngA [Bacteroides helcogenes P 36-108] gi|319415122|gb|ADV42233.1| ribosome-associated GTPase EngA [Bacteroides helcogenes P 36-108] Length = 437 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DFY------- 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++FS Sbjct: 227 ---LVDTAGIRKKNKVNEDLEYYS--VIRSIRSIENSDVCILMLDATRGIESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEV 201 + K A +V+ K D + TA+ ++ + IRN P + ++ K++ ++V Sbjct: 282 IQKNAKGLVVVVNKWDLVEDKTAK-VMKTFEDAIRNRFAPFVDFPIIFASALTKQRILKV 340 Query: 202 LRKA 205 L +A Sbjct: 341 LEQA 344 >gi|303390162|ref|XP_003073312.1| GTP binding protein [Encephalitozoon intestinalis ATCC 50506] gi|303302458|gb|ADM11952.1| GTP binding protein [Encephalitozoon intestinalis ATCC 50506] Length = 376 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 10/70 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN ++N K + + S PG+T+H+ +D L+D Sbjct: 208 VGFVGYPNVGKSSTINSIMNSKRV-KVSQTPGKTRHIQTIYIED---------GPCLLDC 257 Query: 92 PGYGYARAPK 101 PG + R K Sbjct: 258 PGLVFPRHRK 267 >gi|224370723|ref|YP_002604887.1| GTP-binding protein EngA [Desulfobacterium autotrophicum HRM2] gi|259645871|sp|C0QA05|DER_DESAH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|223693440|gb|ACN16723.1| EngA2 [Desulfobacterium autotrophicum HRM2] Length = 492 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 20/156 (12%) Query: 19 PEIGLLPKAGPPE-----------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 PE + P+AG + IA +GR NVGKSSLIN L + + S+ PG T+ Sbjct: 166 PEPVVEPQAGSEQGEPDASEQEICIAVAGRPNVGKSSLINRLFGKSRVV-VSHVPGTTRD 224 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 D S ++ N L+D G ++ ++ + I++ L +L Sbjct: 225 -----SVDLS-IERNGRRFRLIDTAGIRRKGKVRERIEKYS--ILKSLKSLDQCDVALIL 276 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 ID GV D + + + ++ K D L Sbjct: 277 IDADEGVTDQDITIAGYAQDRGCGALFLINKWDLLD 312 >gi|167389832|ref|XP_001739103.1| hypothetical protein [Entamoeba dispar SAW760] gi|165897320|gb|EDR24511.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 539 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 10/78 (12%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 R V +I L I F G NVGKSS IN L+ K + TS PG+T+H + D Sbjct: 334 RLVSDIPLRDNKQRKVIGFCGFPNVGKSSTINSLIGIKKVGVTS-TPGKTKHFQTLILND 392 Query: 76 FSNLKNNLPAMALVDMPG 93 + L D PG Sbjct: 393 ---------ELMLCDCPG 401 >gi|119508848|ref|ZP_01628000.1| tRNA modification GTPase [Nodularia spumigena CCY9414] gi|119466377|gb|EAW47262.1| tRNA modification GTPase [Nodularia spumigena CCY9414] Length = 463 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 23/181 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N ++ + A ++ PG T+ + + + +P L D Sbjct: 227 KVAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-D 279 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G + R + V L ID G + DQ+++ + + + Sbjct: 280 TAGI---RETVDQVEKIG--VERSRRAANAADLVLLTIDASAGWTESDQEIYDQVQHRPL 334 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID +E YP +++ T + K +GI+ L AIL + Sbjct: 335 I--LVINKID---------LVETASIDSGKYPHNIHQIVTTIAAKNQGIDALETAILNIV 383 Query: 211 N 211 Sbjct: 384 Q 384 >gi|22125256|ref|NP_668679.1| GTP-binding protein EngA [Yersinia pestis KIM 10] gi|45442513|ref|NP_994052.1| GTP-binding protein EngA [Yersinia pestis biovar Microtus str. 91001] gi|108808309|ref|YP_652225.1| GTP-binding protein EngA [Yersinia pestis Antiqua] gi|108811426|ref|YP_647193.1| GTP-binding protein EngA [Yersinia pestis Nepal516] gi|145599492|ref|YP_001163568.1| GTP-binding protein EngA [Yersinia pestis Pestoides F] gi|149365335|ref|ZP_01887370.1| putative GTP-binding protein [Yersinia pestis CA88-4125] gi|153948065|ref|YP_001400171.1| GTP-binding protein EngA [Yersinia pseudotuberculosis IP 31758] gi|162419655|ref|YP_001605020.1| GTP-binding protein EngA [Yersinia pestis Angola] gi|165925991|ref|ZP_02221823.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. F1991016] gi|165937070|ref|ZP_02225635.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. IP275] gi|166008076|ref|ZP_02228974.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. E1979001] gi|166212264|ref|ZP_02238299.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. B42003004] gi|167398998|ref|ZP_02304522.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421200|ref|ZP_02312953.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423353|ref|ZP_02315106.1| GTP-binding protein EngA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170023543|ref|YP_001720048.1| GTP-binding protein EngA [Yersinia pseudotuberculosis YPIII] gi|218929935|ref|YP_002347810.1| GTP-binding protein EngA [Yersinia pestis CO92] gi|229838454|ref|ZP_04458613.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895156|ref|ZP_04510332.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Pestoides A] gi|229899021|ref|ZP_04514165.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. India 195] gi|229901683|ref|ZP_04516805.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Nepal516] gi|270489878|ref|ZP_06206952.1| ribosome-associated GTPase EngA [Yersinia pestis KIM D27] gi|294504563|ref|YP_003568625.1| GTP-binding protein EngA [Yersinia pestis Z176003] gi|26006726|sp|Q8ZCT9|DER_YERPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123246587|sp|Q1CK87|DER_YERPN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123372277|sp|Q1C5J2|DER_YERPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225935|sp|A4TMT3|DER_YERPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166920105|sp|A7FFZ3|DER_YERP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238687331|sp|A9R7Z8|DER_YERPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238688573|sp|B1JSA4|DER_YERPY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|21958127|gb|AAM84930.1|AE013738_7 putative GTP-binding factor [Yersinia pestis KIM 10] gi|45437378|gb|AAS62929.1| putative GTP-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|108775074|gb|ABG17593.1| GTP-binding protein [Yersinia pestis Nepal516] gi|108780222|gb|ABG14280.1| putative GTP-binding protein [Yersinia pestis Antiqua] gi|115348546|emb|CAL21486.1| putative GTP-binding protein [Yersinia pestis CO92] gi|145211188|gb|ABP40595.1| GTP-binding protein [Yersinia pestis Pestoides F] gi|149291748|gb|EDM41822.1| putative GTP-binding protein [Yersinia pestis CA88-4125] gi|152959560|gb|ABS47021.1| GTP-binding protein EngA [Yersinia pseudotuberculosis IP 31758] gi|162352470|gb|ABX86418.1| GTP-binding protein EngA [Yersinia pestis Angola] gi|165914933|gb|EDR33545.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. IP275] gi|165922195|gb|EDR39372.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. F1991016] gi|165992458|gb|EDR44759.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. E1979001] gi|166206195|gb|EDR50675.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. B42003004] gi|166960689|gb|EDR56710.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051502|gb|EDR62910.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057523|gb|EDR67269.1| GTP-binding protein EngA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750077|gb|ACA67595.1| small GTP-binding protein [Yersinia pseudotuberculosis YPIII] gi|229681612|gb|EEO77706.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Nepal516] gi|229687966|gb|EEO80038.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. India 195] gi|229694820|gb|EEO84867.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701918|gb|EEO89941.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Pestoides A] gi|262362442|gb|ACY59163.1| GTP-binding protein EngA [Yersinia pestis D106004] gi|262366551|gb|ACY63108.1| GTP-binding protein EngA [Yersinia pestis D182038] gi|270338382|gb|EFA49159.1| ribosome-associated GTPase EngA [Yersinia pestis KIM D27] gi|294355022|gb|ADE65363.1| GTP-binding protein EngA [Yersinia pestis Z176003] gi|320016011|gb|ADV99582.1| ferrous iron transport protein B [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 495 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + ++ A ++ PG T+ + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G+ + +D + ++ +S L V ++D R G+ DQ + Sbjct: 46 EVEGHEFIVVDTGGIDGTEDGVETKMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P TA Sbjct: 106 LRSREKATFLVANKTDGIDPDTA 128 >gi|283955809|ref|ZP_06373300.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792764|gb|EFC31542.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni 1336] Length = 460 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 198 VGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVHKD--------KVIEFVD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + + K + Sbjct: 250 TAGI-RKRGKIQGLERFA--LNRTEKILSHSQIALLVLDAHEGFNELDERIAGLVAKHYL 306 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK T + L++ K+L A+ VI S++ K + VL I Sbjct: 307 GVIIVLNKWDKSEMDFDKTVKELRLDRFKFL------AYAPVISVSALSGKRVHVLLDKI 360 Query: 207 LE 208 L+ Sbjct: 361 LQ 362 >gi|119025629|ref|YP_909474.1| ferrous iron transport protein B [Bifidobacterium adolescentis ATCC 15703] gi|118765213|dbj|BAF39392.1| ferrous iron transport protein B [Bifidobacterium adolescentis ATCC 15703] Length = 655 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 12/74 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL-----NFFVPKDFSNLKNNLPAM 86 + F G NVGKSS+ N L+ + RT NAPG T + ++ PK N +N Sbjct: 5 VVFVGNPNVGKSSMFNALLGAR--TRTMNAPGTTVSITCGQYHYEKPKTAGNAQN----W 58 Query: 87 ALVDMPGYGYARAP 100 VD PG Y+ AP Sbjct: 59 QFVDTPG-TYSLAP 71 >gi|168181631|ref|ZP_02616295.1| GTP-binding protein Era [Clostridium botulinum Bf] gi|237796398|ref|YP_002863950.1| GTP-binding protein Era [Clostridium botulinum Ba4 str. 657] gi|259645941|sp|C3L3F3|ERA_CLOB6 RecName: Full=GTPase Era gi|182675144|gb|EDT87105.1| GTP-binding protein Era [Clostridium botulinum Bf] gi|229262668|gb|ACQ53701.1| GTP-binding protein Era [Clostridium botulinum Ba4 str. 657] Length = 296 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 + GR NVGKS+L+N ++ K L+ S P T+ ++ + +D L VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTEDNYQL-------VFVD 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG PK + G +V+ S+ + V LI+ + D + L + Sbjct: 59 TPG---IHKPKHKL---GEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + Sbjct: 113 VPVFLVLNKIDENPQEKVAETLKTYSELME-----FEEIIPISALKGKNIDLLKELMFKY 167 Query: 210 I 210 I Sbjct: 168 I 168 >gi|90961863|ref|YP_535779.1| GTP-binding protein EngA [Lactobacillus salivarius UCC118] gi|227890889|ref|ZP_04008694.1| GTP-binding protein EngA [Lactobacillus salivarius ATCC 11741] gi|122448999|sp|Q1WTQ4|DER_LACS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|90821057|gb|ABD99696.1| GTP-binding protein [Lactobacillus salivarius UCC118] gi|227867298|gb|EEJ74719.1| GTP-binding protein EngA [Lactobacillus salivarius ATCC 11741] gi|300214593|gb|ADJ79009.1| GTP-binding protein engA [Lactobacillus salivarius CECT 5713] Length = 436 Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 17/170 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALVD 90 +F GR NVGKSSL+N ++ +N SN G T+ F +D + ++D Sbjct: 178 SFIGRPNVGKSSLVNAILG-ENRVIVSNIEGTTRDAIDTRFETEDGTKY-------TMID 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +N + + L +RS + CV L + G+++ D+ V + + Sbjct: 230 TAGIRKKGKVYENTEKYSVLRAMRAIDRSDVVCVVL--NAEEGIREQDKHVAGYAHEAGR 287 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSSVKRK 197 + IV+ K D L +T+ + LIR Y + P V ++ K++ Sbjct: 288 AIVIVVNKWDTLKKD--NKTMSDFENLIRQEFQYLSYAPIVFVSAKTKQR 335 >gi|26987234|ref|NP_742659.1| selenocysteine-specific translation elongation factor [Pseudomonas putida KT2440] gi|24981874|gb|AAN66123.1|AE016240_8 selenocysteine-specific translation elongation factor [Pseudomonas putida KT2440] Length = 640 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 19/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSN-APGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +G + GK++L+ L + R A G T L + ++ L P +D Sbjct: 3 VGTAGHIDHGKTALLLALTGQAGDQRQEERARGMTIDLGY----RYAALSEGAPLTGFID 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ I L+ + V L++ GV ++ + ++ + Sbjct: 59 VPGHER-------------FIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGI 105 Query: 151 SYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V ++K D++ P+ E + L+ P A P SS+ +G++ LR+A+LE Sbjct: 106 PQALVAISKCDRVEPSRLAEVQMQVSELLAPGPYAGARQFPLSSISGEGVDALRQALLE 164 >gi|148545780|ref|YP_001265882.1| selenocysteine-specific translation elongation factor [Pseudomonas putida F1] gi|148509838|gb|ABQ76698.1| selenocysteine-specific translation elongation factor SelB [Pseudomonas putida F1] Length = 640 Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 19/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSN-APGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +G + GK++L+ L + R A G T L + ++ L P +D Sbjct: 3 VGTAGHIDHGKTALLLALTGQAGDQRQEERARGMTIDLGY----RYAALSEGAPLTGFID 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ I L+ + V L++ GV ++ + ++ + Sbjct: 59 VPGHER-------------FIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGI 105 Query: 151 SYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V ++K D++ P+ E + L+ P A P SS+ +G++ LR+A+LE Sbjct: 106 PQALVAISKCDRVEPSRLAEVQMQVSELLAPGPYAGARQFPLSSISGEGVDALRQALLE 164 >gi|168179376|ref|ZP_02614040.1| GTP-binding protein Era [Clostridium botulinum NCTC 2916] gi|182669495|gb|EDT81471.1| GTP-binding protein Era [Clostridium botulinum NCTC 2916] Length = 296 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 + GR NVGKS+L+N ++ K L+ S P T+ ++ + +D L VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTEDNYQL-------VFVD 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG PK + G +V+ S+ + V LI+ + D + L + Sbjct: 59 TPG---IHKPKHKL---GEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + Sbjct: 113 VPVFLVLNKIDENPQEKVAETLKAYSELME-----FEEIIPISALKGKNIDLLKELMFKY 167 Query: 210 I 210 I Sbjct: 168 I 168 >gi|330793175|ref|XP_003284661.1| hypothetical protein DICPUDRAFT_148454 [Dictyostelium purpureum] gi|325085460|gb|EGC38867.1| hypothetical protein DICPUDRAFT_148454 [Dictyostelium purpureum] Length = 770 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 22/108 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G NVGKSSLIN L+ +K + TS PG T+H V FS KN + L+D Sbjct: 438 IGMVGHPNVGKSSLINGLMGKK-VVSTSRTPGHTKHFQTIV---FS--KN----IQLLDC 487 Query: 92 PGYGYARAPK-KNVDSWGGLI-----------VRYLSERSTLRCVYLL 127 PG + + K + GL ++YL+ER + +Y L Sbjct: 488 PGLVFPALDRPKQLQILCGLFPIAQVREPFSAIQYLAERVPVEKIYRL 535 >gi|313206833|ref|YP_004046010.1| ribosome-associated GTPase enga [Riemerella anatipestifer DSM 15868] gi|312446149|gb|ADQ82504.1| ribosome-associated GTPase EngA [Riemerella anatipestifer DSM 15868] gi|315023907|gb|EFT36909.1| GTP-binding protein EngA [Riemerella anatipestifer RA-YM] gi|325335727|gb|ADZ12001.1| Predicted GTPase [Riemerella anatipestifer RA-GD] Length = 435 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 11/143 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILV-NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P G P I +GR NVGKS+L N L+ N++N+ ++ G T+ + F + Sbjct: 171 PFDGLPRITIAGRPNVGKSTLTNALLDNKRNIV--TDIAGTTRDSIETIYNKFGH----- 223 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD G +N++ + ++R + V +++D G + D ++F Sbjct: 224 -EFVLVDTAGMRKKSKVSENLEFYS--VMRSVRAIEHSDVVVIMVDATQGWESQDMNIFG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSPTT 166 K I++ K D + T Sbjct: 281 IAQKNRKGIVILVNKWDLVEKET 303 >gi|229170187|ref|ZP_04297873.1| tRNA modification GTPase mnmE [Bacillus cereus AH621] gi|228613288|gb|EEK70427.1| tRNA modification GTPase mnmE [Bacillus cereus AH621] Length = 458 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 25/175 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDIVERIG--VERSKEMMSQADLVLIVVNYSEALTNEDEDLFHAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D QE +E+ L VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTD-----LPQEIDMERVTDL-----AVGNRVITTSLIEEQGIDELEKAI 374 >gi|224533510|ref|ZP_03674099.1| ribosome-associated GTPase EngA [Borrelia burgdorferi CA-11.2a] gi|224513183|gb|EEF83545.1| ribosome-associated GTPase EngA [Borrelia burgdorferi CA-11.2a] Length = 433 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 10/143 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V E+G+ ++ G+ N GKS+LIN L + +A S+ PG T+ F+ F+ Sbjct: 163 VGEVGI-ESGADIKVGIIGKPNSGKSTLINYLSGNE-IAIVSDQPGTTRD---FIKTKFT 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD G + V+ + + R L + V+LLID + + Sbjct: 218 R---NGKVFEVVDTAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVQEKLTSQ 272 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ + ++ KK IV +K D Sbjct: 273 DKKIAHYVTKKGKGIVIVFSKWD 295 >gi|170761539|ref|YP_001788258.1| GTP-binding protein Era [Clostridium botulinum A3 str. Loch Maree] gi|226741201|sp|B1KZM3|ERA_CLOBM RecName: Full=GTPase Era gi|169408528|gb|ACA56939.1| GTP-binding protein Era [Clostridium botulinum A3 str. Loch Maree] Length = 296 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 + GR NVGKS+L+N ++ K L+ S P T+ ++ + +D L VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTEDNYQL-------VFVD 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG PK + G +V+ S+ + V LI+ + D + L + Sbjct: 59 TPG---IHKPKHKL---GEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + Sbjct: 113 VPVFLVLNKIDENPQEKVAETLKTYSELME-----FEEIIPISALKGKNIDLLKELMFKY 167 Query: 210 I 210 I Sbjct: 168 I 168 >gi|114328959|ref|YP_746116.1| GTP-binding protein EngA [Granulibacter bethesdensis CGDNIH1] gi|114317133|gb|ABI63193.1| GTP-binding protein [Granulibacter bethesdensis CGDNIH1] Length = 483 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 15/121 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A +GR NVGKS+L N LV R+ +A ++ PG T+ + + L+ L + L+ Sbjct: 20 PIVAIAGRPNVGKSTLFNRLVGRR-MALVADTPGVTRDRK----EAEAMLRGRL--VKLI 72 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER--STLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D G AP+ D+ G + R SE S V ++D R G+ D S+L + Sbjct: 73 DT--AGLEEAPQ---DTIAGRM-RQSSETAVSQADLVVFVVDARSGITPADTHFASWLRR 126 Query: 148 K 148 + Sbjct: 127 Q 127 >gi|17227979|ref|NP_484527.1| GTP-binding protein EngA [Nostoc sp. PCC 7120] gi|26006724|sp|Q8YZH7|DER_NOSS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|17129828|dbj|BAB72441.1| GTP binding protein [Nostoc sp. PCC 7120] Length = 453 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 22/170 (12%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ +P + L + +IA GR NVGKSSL+N + + + + ++ F+ Sbjct: 161 LIKHLPPVTELEENNEIKIAIIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIE 220 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL--IVRYLSERSTLRCVYLLIDCR 131 +D N + L+D G KK++D I R V L+ID Sbjct: 221 RDGQNYR-------LIDTAGI----RKKKSIDYGTEFFSINRAFKAIRRADVVLLVIDAL 269 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 GV + DQ + + + + +V+ K D +EK Y I +Y Sbjct: 270 DGVTEQDQKLAGRILDEGKACVVVVNKWD---------AVEKDSYTIYDY 310 >gi|114332120|ref|YP_748342.1| tRNA modification GTPase TrmE [Nitrosomonas eutropha C91] gi|114309134|gb|ABI60377.1| tRNA modification GTPase trmE [Nitrosomonas eutropha C91] Length = 459 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 33/185 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA----MA 87 + +G+ NVGKSSL+N L + +A + PG T+ ++ ++ + Sbjct: 226 VVLTGQPNVGKSSLLNRLAGDE-IAIVTEIPGTTR----------DTIRQSIEIEGIPLH 274 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G R V+ G I R + V LL+D R+GV + D V + L K Sbjct: 275 LIDTAGL---RETSDIVEQHG--IARAYAAIEQADLVLLLVDGRYGVTKEDHSVLARLPK 329 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +L T ++ + L R I S +GIE+LR +L Sbjct: 330 -------------ELPVLTVHNKIDLSGQLSRIEEDTSGTAIYLSVKSGEGIELLRTVLL 376 Query: 208 ETINY 212 +T+ + Sbjct: 377 KTVGW 381 >gi|303257594|ref|ZP_07343606.1| ribosome-associated GTPase EngA [Burkholderiales bacterium 1_1_47] gi|330999635|ref|ZP_08323344.1| ribosome biogenesis GTPase Der [Parasutterella excrementihominis YIT 11859] gi|302859564|gb|EFL82643.1| ribosome-associated GTPase EngA [Burkholderiales bacterium 1_1_47] gi|329574141|gb|EGG55717.1| ribosome biogenesis GTPase Der [Parasutterella excrementihominis YIT 11859] Length = 443 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/183 (20%), Positives = 84/183 (45%), Gaps = 25/183 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNF-FVPKDFSNLKNNLPAM 86 ++A +GR N GKS+LIN L+ L + PG T+ + F + +D++ Sbjct: 179 KVAIAGRPNAGKSTLINALIGEDRLI-AFDMPGTTRDAIEVEFQYKDRDYT--------- 228 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ + +++ L + V LL+D G+ + D ++ ++ Sbjct: 229 -LIDTAGLRRKGKVFEAIEKFS--VIKTLQAIESSNVVVLLLDAHAGIAEQDANIAGYIL 285 Query: 147 KKAVSYQIVLTKIDKLSPTT---AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + + + K D L +E LE+ + +R +++ S+++++G+ L Sbjct: 286 ESGRALVVGVNKWDSLDDYERRRVKEELERKLHFLR-----WAKIVYISALEKRGLHHLL 340 Query: 204 KAI 206 A+ Sbjct: 341 NAV 343 >gi|170754569|ref|YP_001782578.1| GTP-binding protein Era [Clostridium botulinum B1 str. Okra] gi|226741200|sp|B1ILK9|ERA_CLOBK RecName: Full=GTPase Era gi|169119781|gb|ACA43617.1| GTP-binding protein Era [Clostridium botulinum B1 str. Okra] gi|322807262|emb|CBZ04836.1| GTP-binding protein Era [Clostridium botulinum H04402 065] Length = 296 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 + GR NVGKS+L+N ++ K L+ S P T+ ++ + +D L VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTEDNYQL-------VFVD 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG PK + G +V+ S+ + V LI+ + D + L + Sbjct: 59 TPG---IHKPKHKL---GEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + Sbjct: 113 VPVFLVLNKIDENPQEKVAETLKTYSELME-----FEEIIPISALKGKNIDLLKELMFKY 167 Query: 210 I 210 I Sbjct: 168 I 168 >gi|325295030|ref|YP_004281544.1| GTP-binding protein Era-like-protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065478|gb|ADY73485.1| GTP-binding protein Era-like-protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 306 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 23/169 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N + K +A ++ P T+H V +LK+ + +D Sbjct: 13 VAILGRPNVGKSTLLNSFLGTK-VAIVTDKPQTTRHRIIGV----KHLKD--AQIVFLDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSFLD 146 PG + + RY++E + + LID R G ++D+ + + Sbjct: 66 PGIHKEKFE----------LNRYMNEIAFGVIPDADIILFLIDARSGFTEVDKKILQKIG 115 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 ++ V+ I+K+ +E L + + +P +++P S+ + Sbjct: 116 EEKRKDTKVIVVINKIDGVPKEELLPLIDEIHKEFPFV-SDIVPLSATR 163 >gi|315604206|ref|ZP_07879272.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 180 str. F0310] gi|315313912|gb|EFU61963.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 180 str. F0310] Length = 512 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 31/189 (16%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 AG P +A GR NVGKS+L+N ++ R+ A + PG T+ + P +++ +N Sbjct: 74 AGLPVLAVVGRPNVGKSTLVNRILGRRE-AVVQDTPGVTRDRVSY-PAEWAG-RN----F 126 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDV 141 LVD G+ +D G + R ++E++ + V L++D GV D+ + Sbjct: 127 TLVDTGGW--------EIDVKG--LDRSVAEQAEIAVDLADAVVLVLDATVGVTASDERI 176 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L K + K+D + QE YL + E P S++ +G Sbjct: 177 VEMLRSKDKPIILAANKVD----SALQEA--DAAYL---WSLGLGEPHPISALHGRGTGD 227 Query: 202 LRKAILETI 210 L ++ET+ Sbjct: 228 LLDVVMETL 236 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/28 (57%), Positives = 18/28 (64%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVN 51 LP GP +A GR NVGKSSL+N L Sbjct: 246 LPVGGPRRVALVGRPNVGKSSLLNALAG 273 >gi|295092645|emb|CBK78752.1| iron-only hydrogenase maturation protein HydF [Clostridium cf. saccharolyticum K10] Length = 432 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 14/137 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I+F G N GKSSL+N ++LA S+ G T V K L L Sbjct: 7 PSAERVHISFFGCRNAGKSSLLNAFTG-QDLAVVSDVKGTTTDP---VKKSMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI-DCRHGVKQIDQDVFS 143 ++D PG + S GG VR + + + +L+ D + G+++ D+++ + Sbjct: 61 PAVIIDTPGI-------DDEGSLGGRRVRKTRQILNMTDIAVLVADSQTGIRKEDRELAA 113 Query: 144 FLDKKAVSYQIVLTKID 160 +K V Y + K D Sbjct: 114 LFQEKEVPYVVAFNKCD 130 >gi|262383937|ref|ZP_06077073.1| ribosome-associated GTPase EngA [Bacteroides sp. 2_1_33B] gi|262294835|gb|EEY82767.1| ribosome-associated GTPase EngA [Bacteroides sp. 2_1_33B] Length = 437 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 68/167 (40%), Gaps = 35/167 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQH----LNFFVPKDFSNLK 80 P IA GR N GKSSLIN + ++A T+ T++ LNF+ Sbjct: 176 PRIAIIGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFY--------- 226 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVD G + K N D ++R + L++D G++ D + Sbjct: 227 -------LVDTA--GIRKKGKVNEDLEYYSVIRSIRAIENSDVCVLMLDATRGIESQDMN 277 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +FS + K + + K D + +K++ +I +Y TA E Sbjct: 278 IFSLVQKNKKGLVVCVNKWDLVE--------DKSQKVIDSYTTAIRE 316 >gi|318042122|ref|ZP_07974078.1| GTP-binding protein Era-like protein [Synechococcus sp. CB0101] Length = 330 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 21/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV K +A TS T++ + + L + LVD Sbjct: 42 VALVGRPNVGKSTLLNQLVGEK-VAITSPIAQTTRN------RLRAILTTPEAQLVLVDT 94 Query: 92 PGYG--YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG + ++ V + G I + V LL+D + D + L Sbjct: 95 PGIHKPHHLLGERLVQTARGAI-------GEVDLVLLLVDGSQPAGRGDGFIVELLSHAR 147 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + L K D + P A E + L+ ++P + P S++ G E L A+ Sbjct: 148 APVHVALNKHDLVDPAQAIELEASYRELVPDWP-----LHPVSALNGDGTEALVSAL 199 >gi|315926702|gb|EFV06081.1| small GTP-binding domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 460 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 198 VGIVGRVNVGKSSLLNTLVKQERSVVSSIAGTTIDPVNESIVYKD--------KVIEFVD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + + K + Sbjct: 250 TAGI-RKRGKIQGLERFA--LNRTEKILSHSQIALLVLDAHEGFNELDERIAGLVAKHYL 306 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK T + L++ K+L A+ VI S++ K + VL I Sbjct: 307 GVIIVLNKWDKSEMDFDKTVKELRLDRFKFL------AYAPVISVSALSGKRVHVLLDKI 360 Query: 207 LE 208 L+ Sbjct: 361 LQ 362 >gi|307292854|ref|ZP_07572700.1| GTP-binding protein Era [Sphingobium chlorophenolicum L-1] gi|306880920|gb|EFN12136.1| GTP-binding protein Era [Sphingobium chlorophenolicum L-1] Length = 302 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 26/136 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVD 90 IA G N GKS+L+N LV +K + A RT+ + + D M LVD Sbjct: 13 IAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQ--------MVLVD 64 Query: 91 MPGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 PG APK+ +D +WGG ++ + L + L++D + G+ + + S Sbjct: 65 TPGI---FAPKRRLDRAMVQAAWGG------AQGADL--IALVVDGKAGLGAKMEPIVSA 113 Query: 145 LDKKAVSYQIVLTKID 160 L + ++L K+D Sbjct: 114 LAARPEKKWLILNKVD 129 >gi|323526574|ref|YP_004228727.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001] gi|323383576|gb|ADX55667.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001] Length = 445 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + +V DF + P L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERVI-AFDMPGTTRD-SIYV--DFE--RQGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L + T Sbjct: 292 ALVVGVNKWDGLDSHVRERT 311 >gi|218708645|ref|YP_002416266.1| GTP-binding protein EngA [Vibrio splendidus LGP32] gi|254783178|sp|B7VJU2|DER_VIBSL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218321664|emb|CAV17618.1| GTP-binding protein engA [Vibrio splendidus LGP32] Length = 493 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + L Sbjct: 205 PIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MQRDEREYVL 257 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + +V+ L V LLID R + D + F Sbjct: 258 IDTAGVRRRKNINETVEKFS--VVKTLKAIEDANVVLLLIDARENISDQDLSLLGFALNA 315 Query: 149 AVSYQIVLTKIDKLS 163 S I + K D L Sbjct: 316 GRSIVIAVNKWDGLD 330 >gi|157374575|ref|YP_001473175.1| GTP-binding protein EngA [Shewanella sediminis HAW-EB3] gi|189037163|sp|A8FT74|DER_SHESH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157316949|gb|ABV36047.1| small GTP-binding protein [Shewanella sediminis HAW-EB3] Length = 488 Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + F Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY--GRAF------------- 46 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 + GY + +D I +++E+S V L D R G+ DQ + Sbjct: 47 -LSGYEFIVVDTGGIDGTEEGIETHMAEQSLAAIEEADVVLFLTDARAGLTAADQAICEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L ++ + +V K+D + +A Sbjct: 106 LRRREKTTFVVANKVDGIDADSA 128 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + ++PG T+ + ++P ++ + + Sbjct: 199 PIKMAIIGKPNVGKSTLTNRILGEERVV-VYDSPGTTRD-SIYIP-----MERDGREYVM 251 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L+ID R G+ + D + F Sbjct: 252 IDTAGVRRRSKVHETVEKFS--VIKTLKAVEDCNVVLLIIDAREGIAEQDLGLLGFALNA 309 Query: 149 AVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 310 GRALVIAVNKWDGID 324 >gi|294501987|ref|YP_003565687.1| tRNA modification GTPase TrmE [Bacillus megaterium QM B1551] gi|294351924|gb|ADE72253.1| tRNA modification GTPase TrmE [Bacillus megaterium QM B1551] Length = 462 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 25/172 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 231 GRPNVGKSSLLNSLVQDAK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 R + V+ G R YL E + L+++ + D+ +F + K + + Sbjct: 283 --RETEDIVERIGVERSRQYLKEAD---LILLVLNFNEELTDEDKKLFEAV--KGMDVIV 335 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ K D +E ++ + HP V+ TS ++ +GI+ L +AI Sbjct: 336 IVNKTDLEQKINLEE--------VQQFAGDHP-VVTTSLLQEQGIDQLEEAI 378 >gi|225181110|ref|ZP_03734557.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1] gi|225168307|gb|EEG77111.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1] Length = 440 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 11/133 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 +A GR NVGKSSL N L + + S+ PG T+ ++ + +D N K VD Sbjct: 176 VAIIGRPNVGKSSLTNKLSGTERVI-VSDMPGTTRDAIDLLIERD--NRK-----YLFVD 227 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + ++R + + V +LID GV + D+ + + Sbjct: 228 TAGIRRKSKVDEAVEYYS--VLRSIRAAESADVVLMLIDAAEGVTEQDKRIAGIAHEAGR 285 Query: 151 SYQIVLTKIDKLS 163 + IV+ K DK+ Sbjct: 286 ALVIVVNKWDKVE 298 >gi|205422392|sp|Q0AE55|MNME_NITEC RecName: Full=tRNA modification GTPase mnmE Length = 451 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 33/185 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA----MA 87 + +G+ NVGKSSL+N L + +A + PG T+ ++ ++ + Sbjct: 218 VVLTGQPNVGKSSLLNRLAGDE-IAIVTEIPGTTR----------DTIRQSIEIEGIPLH 266 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G R V+ G I R + V LL+D R+GV + D V + L K Sbjct: 267 LIDTAGL---RETSDIVEQHG--IARAYAAIEQADLVLLLVDGRYGVTKEDHSVLARLPK 321 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +L T ++ + L R I S +GIE+LR +L Sbjct: 322 -------------ELPVLTVHNKIDLSGQLSRIEEDTSGTAIYLSVKSGEGIELLRTVLL 368 Query: 208 ETINY 212 +T+ + Sbjct: 369 KTVGW 373 >gi|153807730|ref|ZP_01960398.1| hypothetical protein BACCAC_02012 [Bacteroides caccae ATCC 43185] gi|149129339|gb|EDM20553.1| hypothetical protein BACCAC_02012 [Bacteroides caccae ATCC 43185] Length = 465 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 18/188 (9%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N + A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLNEER-AIVSDIHGTTRD----VIEDTINIG 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V +ID + QI+Q Sbjct: 267 G--VTFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMIDSVNAASQIEQL 319 Query: 141 VFSFLDKKAVSYQI-VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + + I V K D + ++ L L++++ + E I S+ +R Sbjct: 320 SEKIIPRCEGKHLIAVFNKADLIEEKQKEDLL----TLLKDFSKEYTESIFISAKQRGNT 375 Query: 200 EVLRKAIL 207 E L+K ++ Sbjct: 376 EELQKMLI 383 >gi|116074031|ref|ZP_01471293.1| tRNA modification GTPase [Synechococcus sp. RS9916] gi|116069336|gb|EAU75088.1| tRNA modification GTPase [Synechococcus sp. RS9916] Length = 463 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 13/137 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N L +R+ A ++ PG T+ L + + +P + L+D Sbjct: 233 VALVGRPNVGKSSLLNRL-SRRERAIVTDLPGTTRDL-----LESEIVLEGVP-ITLLDT 285 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G I R ++ V LL D G DQ + + + + V Sbjct: 286 AGI---RVTTDAVEQLG--IARSHDALASADLVLLLFDLSEGWTAEDQALLARI-PEGVE 339 Query: 152 YQIVLTKIDKLSPTTAQ 168 + +V K D +P A+ Sbjct: 340 HLLVGNKADLAAPVQAE 356 >gi|113865923|ref|NP_001039005.1| hypothetical protein LOC620913 [Mus musculus] gi|56800253|emb|CAI35119.1| novel interferon-inducible GTPase (IIGP) family member [Mus musculus] gi|148701835|gb|EDL33782.1| similar to T-cell specific GTPase [Mus musculus] Length = 835 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 22/138 (15%) Query: 28 GPPEIAFSGRSNVGKSSLINIL----VNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P IA +G + GKSS IN L K+ A T + + PK L Sbjct: 471 APLNIAVTGETGTGKSSFINALRGISSEEKDAAPTGVIETTMKRTPYPHPK--------L 522 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + + D+PG G P +N YL+E + +I K+ID + Sbjct: 523 PNVTIWDLPGIGSTNFPPQN----------YLTEMKFGEYDFFIIISATRFKEIDAHLAK 572 Query: 144 FLDKKAVSYQIVLTKIDK 161 + K + + V TKID+ Sbjct: 573 AIAKMNIKFYFVRTKIDQ 590 >gi|86151224|ref|ZP_01069439.1| GTPase family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|86153811|ref|ZP_01072014.1| GTP-binding protein engA [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612239|ref|YP_001000097.1| GTP-binding protein EngA [Campylobacter jejuni subsp. jejuni 81-176] gi|167005055|ref|ZP_02270813.1| GTP-binding protein EngA [Campylobacter jejuni subsp. jejuni 81-176] gi|315123946|ref|YP_004065950.1| GTPase family protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|166224324|sp|A1VYA6|DER_CAMJJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|85841571|gb|EAQ58818.1| GTPase family protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85842772|gb|EAQ59984.1| GTP-binding protein engA [Campylobacter jejuni subsp. jejuni HB93-13] gi|87250505|gb|EAQ73463.1| GTPase family protein [Campylobacter jejuni subsp. jejuni 81-176] gi|315017668|gb|ADT65761.1| GTPase family protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 460 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 198 VGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVHKD--------KVIEFVD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + + K + Sbjct: 250 TAGI-RKRGKIQGLERFA--LNRTEKILSHSQIALLVLDAHEGFNELDERIAGLVAKHYL 306 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK T + L++ K+L A+ VI S++ K + VL I Sbjct: 307 GVIIVLNKWDKSEMDFDKTVKELRLDRFKFL------AYAPVISVSALSGKRVHVLLDKI 360 Query: 207 LE 208 L+ Sbjct: 361 LQ 362 >gi|67477221|ref|XP_654115.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|56471137|gb|EAL48729.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS] Length = 541 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 10/78 (12%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 R V +I L I F G NVGKSS IN L+ K + TS PG+T+H + D Sbjct: 336 RLVSDIPLRDNKQRKVIGFCGFPNVGKSSTINSLIGIKKVGVTS-TPGKTKHFQTLILND 394 Query: 76 FSNLKNNLPAMALVDMPG 93 + L D PG Sbjct: 395 ---------ELMLCDCPG 403 >gi|319760649|ref|YP_004124587.1| GTP-binding protein engA [Candidatus Blochmannia vafer str. BVAF] gi|318039363|gb|ADV33913.1| GTP-binding protein engA [Candidatus Blochmannia vafer str. BVAF] Length = 478 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 23/201 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + L+ + ++A GR N GKS+ IN +V + TS+ PG T+ + ++P N K Sbjct: 195 VSLVSENNSIKLAVVGRPNSGKSTFINYVVQESRVI-TSSIPGTTRD-SVYIPIICYNQK 252 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLI--VRYLSERSTLRCVYLLIDCRHGVKQID 138 L+D G R K +D+ I ++ + L+ID G+ D Sbjct: 253 -----YMLIDTAGI--RRGNNKYIDNLPERISVLKTFQVIKDAHVILLIIDINEGIVDQD 305 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSP-------TTAQETLEKTKYLIRNYPTAHPEVIPT 191 + +F+ + S I L K D SP Q K +L + T I Sbjct: 306 LSLLNFIIRHGRSLVIALNKWDNFSPLIKNSKSIILQSLTRKLNFL--GFSTVKMHFI-- 361 Query: 192 SSVKRKGIEVLRKAILETINY 212 SS+ G+++L K+I E I++ Sbjct: 362 SSLYGYGVKLLFKSI-EKIHF 381 >gi|313214452|emb|CBY40824.1| unnamed protein product [Oikopleura dioica] Length = 306 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 21/108 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ F G +NVGKSS++N LV K+ + S PG T+ L + N + LVD Sbjct: 85 KVGFVGHTNVGKSSIMNALVGEKHFS-MSIRPGHTKELQTW---------NVSEHVQLVD 134 Query: 91 MPGYGYARAPKKNVDSWGGL-----------IVRYLSERSTLRCVYLL 127 PG + + + GL ++ YL+ER L + L Sbjct: 135 SPGIIFPSTVSRQLQILSGLFPVDQVREPYSVIGYLAERVNLVAAFHL 182 >gi|293400643|ref|ZP_06644788.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305669|gb|EFE46913.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 438 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 15/170 (8%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L+N++ + SN G T+ P K ++D G Sbjct: 183 GRPNVGKSSLVNALLNQERVI-VSNIEGTTRDA-IDTP-----FKREGKEYVVIDTAGIR 235 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 +N++ + L ERS + V ++ID G++ D+ V F + IV Sbjct: 236 KRGKVYENIEKYSVLRAMSAIERSDV--VLVVIDGESGIRDQDKHVAGFAHEAGKGVIIV 293 Query: 156 LTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSSVKRKGIEVL 202 K D + ++T+ + + IR Y + P ++ S++K++ I+ + Sbjct: 294 YNKWDAVEKD--EKTMNRIEKEIRTQFQYLSYAP-ILFVSALKKQRIQTI 340 >gi|160901780|ref|YP_001567361.1| GTP-binding protein Era [Petrotoga mobilis SJ95] gi|160359424|gb|ABX31038.1| GTP-binding protein Era [Petrotoga mobilis SJ95] Length = 306 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 28/129 (21%), Positives = 59/129 (45%), Gaps = 12/129 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +G+ NVGKS+LIN L+ +K + + +N + +D + VD Sbjct: 11 VALAGKPNVGKSTLINALLGQKVVIVSDKTQTTRNRVNCILTEDHYQI-------VFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P + + + ++ ++ + + +ID + G++ D V +DK + Sbjct: 64 PG---IHKPIRKIGEY--MVNIAINALKGVDLILFIIDAKDGLRNSDLRVTEIVDKSKIP 118 Query: 152 YQIVLTKID 160 +++ K+D Sbjct: 119 TILLVNKVD 127 >gi|56422029|ref|YP_149347.1| tRNA modification GTPase TrmE [Geobacillus kaustophilus HTA426] gi|261420902|ref|YP_003254584.1| tRNA modification GTPase TrmE [Geobacillus sp. Y412MC61] gi|319768573|ref|YP_004134074.1| tRNA modification GTPase TrmE [Geobacillus sp. Y412MC52] gi|81346199|sp|Q5KU57|MNME_GEOKA RecName: Full=tRNA modification GTPase mnmE gi|56381871|dbj|BAD77779.1| thiophen/furan oxidation protein [Geobacillus kaustophilus HTA426] gi|261377359|gb|ACX80102.1| tRNA modification GTPase TrmE [Geobacillus sp. Y412MC61] gi|317113439|gb|ADU95931.1| tRNA modification GTPase TrmE [Geobacillus sp. Y412MC52] Length = 462 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L + +N A ++ PG T+ V +++ N++ +P + L+D G Sbjct: 231 GRPNVGKSSLLNALAH-ENRAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLIDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + + +R+ L + L+++ + + D+ +F+ ++ + ++ Sbjct: 283 --RETEDVVERIGVERSQQMLKRADL--ILLVLNYHEPLTEEDERLFAMIE--GMDAIVI 336 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D + +E+ K L P V+ TS + +GI+ L KAI Sbjct: 337 VNKTD----LPRRIDMERVKELAAGRP-----VVGTSLLHEQGIDELEKAI 378 >gi|332800542|ref|YP_004462041.1| tRNA modification GTPase mnmE [Tepidanaerobacter sp. Re1] gi|332698277|gb|AEE92734.1| tRNA modification GTPase mnmE [Tepidanaerobacter sp. Re1] Length = 462 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 23/175 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G +NVGKSSL+N L+ + A ++ PG T+ + +++ +++ +P + ++D G Sbjct: 231 GNTNVGKSSLLNALLQEER-AIVTDIPGTTRD----IIEEYIDIQ-GIP-IKIIDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R V+ G I R + V L+ID + D+ + + K Sbjct: 283 --RQTTDEVEKIG--INRAMKHLQEAELVLLMIDVSRKLTDDDKRLIELVGDKT-----T 333 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +T I+K+ A + E K + P A ++ S++K++GI+ L+ I +TI Sbjct: 334 ITVINKVDLPVAVDEYEIKKLV----PEAK--IVKVSALKQEGIDELKTVIYDTI 382 >gi|294140150|ref|YP_003556128.1| GTP-binding protein EngA [Shewanella violacea DSS12] gi|293326619|dbj|BAJ01350.1| GTP-binding protein EngA [Shewanella violacea DSS12] Length = 490 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 13/147 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+LIN ++ + + ++PG T+ + ++P ++ L Sbjct: 199 PIKLAIIGKPNVGKSTLINRILGEERVV-VYDSPGTTRD-SIYIP-----MEREGREYVL 251 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L+ID R G+ + D + F Sbjct: 252 IDTAGVRRRSKVHETVEKFS--VIKTLKAIEDCNVVLLIIDAREGIAEQDLGLLGFALNA 309 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I + K D ++ QE ++ K Sbjct: 310 GRALVIAVNKWDGIN----QEIKDRVK 332 Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 + GY + +D I +++E+S V L D R G+ D + Sbjct: 46 SLSGYEFIVVDTGGIDGTEEGIEVHMAEQSLAAIEEADVVLFLTDARAGLTAADHAIADH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L ++ + +V K+D + +A Sbjct: 106 LRRRDKTTFVVANKVDGIDADSA 128 >gi|255027717|ref|ZP_05299703.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-003] Length = 301 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ L+ + +Y +ID G + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIALNTFQEVDLIYFVIDASTGFGRGDEFIVEKLKNVQT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +++ KID ++P + +E+ + L+ E+IP S+++ Sbjct: 117 PVFLLINKIDLIAPEDLFKLIEQYRDLM-----DFDEIIPISALQ 156 >gi|157414681|ref|YP_001481937.1| GTP-binding protein EngA [Campylobacter jejuni subsp. jejuni 81116] gi|172047057|sp|A8FKH3|DER_CAMJ8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157385645|gb|ABV51960.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747321|gb|ADN90591.1| GTP-binding protein engA [Campylobacter jejuni subsp. jejuni M1] gi|315932681|gb|EFV11611.1| small GTP-binding domain protein [Campylobacter jejuni subsp. jejuni 327] Length = 460 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 198 VGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVHKD--------KVIEFVD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + + K + Sbjct: 250 TAGI-RKRGKIQGLERFA--LNRTEKILSHSQIALLVLDAHEGFNELDERIAGLVAKHYL 306 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK T + L++ K+L A+ VI S++ K + VL I Sbjct: 307 GVIIVLNKWDKSEMDFDKTVKELHLDRFKFL------AYAPVISVSALSGKRVHVLLDKI 360 Query: 207 LE 208 L+ Sbjct: 361 LQ 362 >gi|87198885|ref|YP_496142.1| GTP-binding protein EngA [Novosphingobium aromaticivorans DSM 12444] gi|123490336|sp|Q2GA15|DER_NOVAD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|87134566|gb|ABD25308.1| Small GTP-binding protein domain [Novosphingobium aromaticivorans DSM 12444] Length = 461 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 15/133 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++ GR NVGKS+L N LV +K LA + PG T+ F D S L + +V Sbjct: 3 PQVIIIGRPNVGKSTLFNRLVGKK-LALVDDQPGVTRDRRF---GDASLLGLDF---TIV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDK 147 D G+ ++ + G + R +E S + +ID R GV +D+++ +L + Sbjct: 56 DTAGW-----EDEDPSTLPGRM-RKQTEASLVGADVALFVIDARAGVTPLDEEIARYLRQ 109 Query: 148 KAVSYQIVLTKID 160 V ++ K + Sbjct: 110 STVPIVLMANKAE 122 >gi|310658154|ref|YP_003935875.1| iron-only hydrogenase maturation protein [Clostridium sticklandii DSM 519] gi|308824932|emb|CBH20970.1| Iron-only hydrogenase maturation protein [Clostridium sticklandii] Length = 398 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 41/196 (20%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P I G+ N GKSSL+N + +K ++ S+ G T P Sbjct: 5 PSGNRTHIGIFGKRNAGKSSLLNAITEQK-VSLVSDIGGTTTD----------------P 47 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCR---HGVKQIDQ 139 +++ YG P +D+ G V L E ++ + ++ ID H + ID+ Sbjct: 48 VKKAMELLPYG----PVLFIDTAGLDDVGVLGELRKNRAKEMFTQIDFALIVHDINDIDK 103 Query: 140 DVFSFLDKK----AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + S L ++ +VSY IV+ K+D T Q+ E +PE S+ K Sbjct: 104 EFESELLREFKRFSVSYMIVINKLDSADEETKQQIQE-----------TYPEAFFLSTSK 152 Query: 196 RKGIEVLRKAILETIN 211 R+ + +KA+++ ++ Sbjct: 153 REDVLDFKKALIDKLS 168 >gi|301632619|ref|XP_002945379.1| PREDICTED: hypothetical protein LOC100487340 [Xenopus (Silurana) tropicalis] Length = 937 Score = 39.7 bits (91), Expect = 0.27, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 11/181 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 GP ++A +GR NVGKS+LIN + + L + PG T+ VP + K L A Sbjct: 187 GPVKLAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRDA-ISVPFERQGQKFELIDTA 244 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 + G + K +V V+ L + V LL+D GV D + ++ + Sbjct: 245 GLRRKGRVFEAIEKFSV-------VKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILE 297 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + I + K D + Q + + A+ I S+ KR+G+ L +I+ Sbjct: 298 SGRAVVIAVNKWDAVDDYQRQMLGRSIEARLSFLKFANLHFI--SAQKRQGLGPLWTSIM 355 Query: 208 E 208 + Sbjct: 356 Q 356 >gi|295396781|ref|ZP_06806916.1| ribosome-associated GTPase EngA [Brevibacterium mcbrellneri ATCC 49030] gi|294970365|gb|EFG46305.1| ribosome-associated GTPase EngA [Brevibacterium mcbrellneri ATCC 49030] Length = 503 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 41/191 (21%) Query: 27 AGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG----RTQHLNFFVPKDFSNLKN 81 +GP P +A GR NVGKS+L+N ++ R+ A + PG R + + +D + Sbjct: 64 SGPSPILAIVGRPNVGKSTLVNRILGRRE-AVVEDVPGVTRDRVSYTAHWAGRDIT---- 118 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQ 136 LVD G+ ++DS G + ++E++ + V ++D G+ Sbjct: 119 ------LVDTGGW--------DIDSKG--MASRIAEQAEIAVELADAVVFVLDVHTGITS 162 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + L K + K+D E E + + N P P S++ Sbjct: 163 TDEHIVRMLRKTGKPVIVAANKVD-------DERSELAAFELWNLGLGEPS--PVSAMHG 213 Query: 197 KGI-EVLRKAI 206 +G+ ++L +A+ Sbjct: 214 RGVADLLDRAV 224 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 9/54 (16%) Query: 18 VPEIG----LLPKAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAP 62 +PE+ ++ + GP +A GR NVGKSSL+N LV + N+A T+ P Sbjct: 227 LPEVSGVDQMVEEGGPRRVALIGRPNVGKSSLLNRLVGSERVMVDNVAGTTRDP 280 >gi|302874334|ref|YP_003842967.1| GTP-binding protein Era [Clostridium cellulovorans 743B] gi|307689399|ref|ZP_07631845.1| GTP-binding protein Era [Clostridium cellulovorans 743B] gi|302577191|gb|ADL51203.1| GTP-binding protein Era [Clostridium cellulovorans 743B] Length = 296 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 27/182 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N L+ K L+ S P T++ KDF + V Sbjct: 7 VAIIGRPNVGKSTLMNNLMGEK-LSIVSPRPQTTRNNIQTILTKKDFQ--------IIFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI---DQDVFSFLD 146 D PG PK + G +++ +S+ +L+ V L++ ++ D+ + L Sbjct: 58 DTPGM---HKPKHKL---GEFMMKSVSD--SLKDVDLVVFMTTADGELGPGDKHILEDLK 109 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K +V+ KID+ T ETL+ L+ E+IP S++ K + L + + Sbjct: 110 KVNSKKFLVVNKIDETKAETVAETLQVVGELVE-----FDEIIPISALNGKNTDKLLELM 164 Query: 207 LE 208 ++ Sbjct: 165 VD 166 >gi|1813480|gb|AAB41682.1| putative GTPase [Campylobacter jejuni] Length = 383 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 198 VGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVHKD--------KVIEFVD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + + K + Sbjct: 250 TAGI-RKRGKIQGLERFA--LNRTEKILSHSQIALLVLDAHEGFNELDERIAGLVAKHYL 306 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK T + L++ K+L A+ VI S++ K + VL I Sbjct: 307 GVIIVLNKWDKSEMDFDKTVKELHLDRFKFL------AYAPVISVSALSGKRVHVLLDKI 360 Query: 207 LE 208 L+ Sbjct: 361 LQ 362 >gi|253569670|ref|ZP_04847079.1| tRNA modification GTPase mnmE [Bacteroides sp. 1_1_6] gi|251840051|gb|EES68133.1| tRNA modification GTPase mnmE [Bacteroides sp. 1_1_6] Length = 465 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 45/190 (23%), Positives = 88/190 (46%), Gaps = 22/190 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D N+ Sbjct: 213 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTINIG 266 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG---VKQI 137 +D G R ++S G I R + V ++D +KQ+ Sbjct: 267 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMVDSSDASSQIKQL 319 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + + ++K + +V K D + ++ E+ L++++P + + I S+ +RK Sbjct: 320 SEKIIPRCEEKQLI--VVFNKADLIE----EKQKEELSALLKDFPKEYTKSIFISAKERK 373 Query: 198 GIEVLRKAIL 207 + L+K ++ Sbjct: 374 QTDELQKMLI 383 >gi|126668584|ref|ZP_01739538.1| GTP-binding protein EngA [Marinobacter sp. ELB17] gi|126626989|gb|EAZ97632.1| GTP-binding protein EngA [Marinobacter sp. ELB17] Length = 474 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 13/148 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L+N ++ + + + PG T+ + ++P + L L+D Sbjct: 179 IGIVGRPNVGKSTLVNRMLGEERVV-VYDLPGTTRD-SIYIP--YERLGQEY---TLIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ V+ + I++ L V L+ID R G+ D + F+ S Sbjct: 232 AGVRRRKNVREVVEKFS--IIKTLQAIDDAHVVILVIDAREGLVDQDMHLMGFVLSAGRS 289 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIR 179 I + K D ++ E +K K IR Sbjct: 290 LVIAINKWDGMNG----EDRDKVKEQIR 313 >gi|163943164|ref|YP_001648048.1| tRNA modification GTPase TrmE [Bacillus weihenstephanensis KBAB4] gi|229136309|ref|ZP_04265056.1| tRNA modification GTPase mnmE [Bacillus cereus BDRD-ST196] gi|205829111|sp|A9VTM0|MNME_BACWK RecName: Full=tRNA modification GTPase mnmE gi|163865361|gb|ABY46420.1| tRNA modification GTPase TrmE [Bacillus weihenstephanensis KBAB4] gi|228647181|gb|EEL03269.1| tRNA modification GTPase mnmE [Bacillus cereus BDRD-ST196] Length = 458 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 25/175 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDIVERIG--VERSKEMMSQADLVLIVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D QE +E+ L VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTD-----LPQEIDMERVTDL-----AVGNRVITTSLIEEQGIDELEKAI 374 >gi|57237441|ref|YP_178454.1| GTP-binding protein EngA [Campylobacter jejuni RM1221] gi|86149131|ref|ZP_01067363.1| GTPase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597436|ref|ZP_01100671.1| GTPase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562044|ref|YP_002343823.1| GTP-binding protein EngA [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|26006744|sp|Q9PIB6|DER_CAMJE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|81819560|sp|Q5HW81|DER_CAMJR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|57166245|gb|AAW35024.1| GTPase family protein [Campylobacter jejuni RM1221] gi|85840489|gb|EAQ57746.1| GTPase family protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190497|gb|EAQ94471.1| GTPase family protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112359750|emb|CAL34536.1| putative GTP-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925657|gb|ADC28009.1| GTP-binding protein EngA [Campylobacter jejuni subsp. jejuni IA3902] gi|315057809|gb|ADT72138.1| GTP-binding protein EngA [Campylobacter jejuni subsp. jejuni S3] Length = 460 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 198 VGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVHKD--------KVIEFVD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + + K + Sbjct: 250 TAGI-RKRGKIQGLERFA--LNRTEKILSHSQIALLVLDAHEGFNELDERIAGLVAKHYL 306 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK T + L++ K+L A+ VI S++ K + VL I Sbjct: 307 GVIIVLNKWDKSEMDFDKTVKELRLDRFKFL------AYAPVISVSALSGKRVHVLLDKI 360 Query: 207 LE 208 L+ Sbjct: 361 LQ 362 >gi|324329435|gb|ADY24695.1| tRNA modification GTPase TrmE [Bacillus thuringiensis serovar finitimus YBT-020] Length = 458 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D + +E A +I TS ++ +GI+ L AI Sbjct: 330 IVIVNKTDLPQAIDMERVIE---------LAAGNRIITTSLIEEQGIDELETAI 374 >gi|268592767|ref|ZP_06126988.1| putative GTP-binding protein [Providencia rettgeri DSM 1131] gi|291311544|gb|EFE51997.1| putative GTP-binding protein [Providencia rettgeri DSM 1131] Length = 287 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 19/140 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G++ GKSSLIN L + L+ SN G T+ F N+ N + + Sbjct: 31 PTIGLMGKTGAGKSSLINALF-QSALSPVSNVSGCTRQAQLF------NMTINNHTLTFI 83 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PG G + K + L L E L + ++ D+ + FL ++ Sbjct: 84 DLPGVGESLERDK---EYHQLYRNLLPE---LDLIIWVLKADDRAWSSDEQCYRFLTEQC 137 Query: 150 VSYQ-----IVLTKIDKLSP 164 YQ VL + DK+ P Sbjct: 138 -GYQSERFLFVLNQADKIEP 156 >gi|205355964|ref|ZP_03222732.1| putative GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346088|gb|EDZ32723.1| putative GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 460 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 198 VGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVHKD--------KVIEFVD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + + K + Sbjct: 250 TAGI-RKRGKIQGLERFA--LNRTEKILSHSQIALLVLDAHEGFNELDERIAGLVAKHYL 306 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK T + L++ K+L A+ VI S++ K + VL I Sbjct: 307 GVIIVLNKWDKSEMDFDKTVKELRLDRFKFL------AYAPVISVSALSGKRVHVLLDKI 360 Query: 207 LE 208 L+ Sbjct: 361 LQ 362 >gi|15594853|ref|NP_212642.1| GTP-binding protein EngA [Borrelia burgdorferi B31] gi|218249913|ref|YP_002375018.1| ribosome-associated GTPase EngA [Borrelia burgdorferi ZS7] gi|221218131|ref|ZP_03589597.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 72a] gi|224532891|ref|ZP_03673503.1| ribosome-associated GTPase EngA [Borrelia burgdorferi WI91-23] gi|225548736|ref|ZP_03769783.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 94a] gi|225549607|ref|ZP_03770573.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 118a] gi|226321818|ref|ZP_03797344.1| ribosome-associated GTPase EngA [Borrelia burgdorferi Bol26] gi|8134424|sp|O51461|DER_BORBU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|2688422|gb|AAC66872.1| GTP-binding protein [Borrelia burgdorferi B31] gi|218165101|gb|ACK75162.1| ribosome-associated GTPase EngA [Borrelia burgdorferi ZS7] gi|221192079|gb|EEE18300.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 72a] gi|224512167|gb|EEF82556.1| ribosome-associated GTPase EngA [Borrelia burgdorferi WI91-23] gi|225369884|gb|EEG99331.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 118a] gi|225370766|gb|EEH00202.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 94a] gi|226233007|gb|EEH31760.1| ribosome-associated GTPase EngA [Borrelia burgdorferi Bol26] Length = 433 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 10/143 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V E+G+ ++ G+ N GKS+LIN L + +A S+ PG T+ F+ F+ Sbjct: 163 VGEVGI-ESGADIKVGIIGKPNSGKSTLINYLSGNE-IAIVSDQPGTTRD---FIKTKFT 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD G + V+ + + R L + V+LLID + + Sbjct: 218 R---NGKVFEVVDTAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVQEKLTSQ 272 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ + ++ KK IV +K D Sbjct: 273 DKKIAHYVTKKGKGIVIVFSKWD 295 >gi|210633108|ref|ZP_03297675.1| hypothetical protein COLSTE_01584 [Collinsella stercoris DSM 13279] gi|210159262|gb|EEA90233.1| hypothetical protein COLSTE_01584 [Collinsella stercoris DSM 13279] Length = 444 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 18/162 (11%) Query: 21 IGLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFV 72 + LLP+ E +A GR N GKSSL N ++ + + SN G T+ ++ V Sbjct: 163 VALLPEDAGEEDEPDTLRVAIIGRPNAGKSSLFNKMIG-NDRSIVSNIAGTTRDAIDTVV 221 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +D + +VD G +N++ + +VR L L++D Sbjct: 222 ERDGKRYR-------MVDTAGIRKKSTVYENIEYYS--MVRGLRAIDRADVALLVVDAST 272 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT 174 GV + DQ V + ++ + ++L K D L ++ + +T Sbjct: 273 GVTEQDQKVANLAIERGCALVVLLNKWDLLKDDYERDAVMET 314 >gi|170723482|ref|YP_001751170.1| GTP-binding protein EngA [Pseudomonas putida W619] gi|229784138|sp|B1JDV4|DER_PSEPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169761485|gb|ACA74801.1| small GTP-binding protein [Pseudomonas putida W619] Length = 487 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 14/141 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + + PG T+ + ++P + N K Sbjct: 186 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDQPGTTRD-SIYIPFERDNEKYT 243 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 A V G + K +V V+ L V ++D R GV D ++ Sbjct: 244 FIDTAGVRKRGKIHEEVEKFSV-------VKTLQAIKDANVVIFVMDAREGVVDHDLNLL 296 Query: 143 SFLDKKAVSYQIVLTKIDKLS 163 F + + I L K D + Sbjct: 297 GFALEAGRAIVIALNKWDGME 317 >gi|42784680|ref|NP_981927.1| tRNA modification GTPase TrmE [Bacillus cereus ATCC 10987] gi|81408275|sp|Q72WU3|MNME_BACC1 RecName: Full=tRNA modification GTPase mnmE gi|42740612|gb|AAS44535.1| tRNA modification GTPase TrmE [Bacillus cereus ATCC 10987] Length = 458 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D + +E A +I TS ++ +GI+ L AI Sbjct: 330 IVIVNKTDLPQAIDMERVIE---------LAAGNRIITTSLIEEQGIDELETAI 374 >gi|315929258|gb|EFV08474.1| small GTP-binding domain protein [Campylobacter jejuni subsp. jejuni 305] Length = 394 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 132 VGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESVVHKD--------KVIEFVD 183 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + + K + Sbjct: 184 TAGI-RKRGKIQGLERFA--LNRTEKILSHSQIALLVLDAHEGFNELDERIAGLVAKHYL 240 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK T + L++ K+L A+ VI S++ K + VL I Sbjct: 241 GVIIVLNKWDKSEMDFDKTVKELRLDRFKFL------AYAPVISVSALSGKRVHVLLDKI 294 Query: 207 LE 208 L+ Sbjct: 295 LQ 296 >gi|228942633|ref|ZP_04105165.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975563|ref|ZP_04136115.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982199|ref|ZP_04142488.1| tRNA modification GTPase mnmE [Bacillus thuringiensis Bt407] gi|228777551|gb|EEM25829.1| tRNA modification GTPase mnmE [Bacillus thuringiensis Bt407] gi|228784173|gb|EEM32200.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817059|gb|EEM63152.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943282|gb|AEA19178.1| tRNA modification GTPase TrmE [Bacillus thuringiensis serovar chinensis CT-43] Length = 458 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFHAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P +E+ L VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDL--PQAID--MERVTELAEG-----NRVITTSLIEEQGIDELEKAI 374 >gi|195941645|ref|ZP_03087027.1| GTP-binding protein EngA [Borrelia burgdorferi 80a] gi|312149483|gb|ADQ29554.1| ribosome-associated GTPase EngA [Borrelia burgdorferi N40] Length = 433 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 10/143 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V E+G+ ++ G+ N GKS+LIN L + +A S+ PG T+ F+ F+ Sbjct: 163 VGEVGI-ESGADIKVGIIGKPNSGKSTLINYLSGNE-IAIVSDQPGTTRD---FIKTKFA 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD G + V+ + + R L + V+LLID + + Sbjct: 218 R---NGKVFEVVDTAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVQEKLTSQ 272 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ + ++ KK IV +K D Sbjct: 273 DKKIAHYVTKKGKGIVIVFSKWD 295 >gi|312148299|gb|ADQ30958.1| ribosome-associated GTPase EngA [Borrelia burgdorferi JD1] Length = 433 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 10/143 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V E+G+ ++ G+ N GKS+LIN L + +A S+ PG T+ F+ F+ Sbjct: 163 VGEVGI-ESGADIKVGIIGKPNSGKSTLINYLSGNE-IAIVSDQPGTTRD---FIKTKFT 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD G + V+ + + R L + V+LLID + + Sbjct: 218 R---NGKVFEVVDTAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVQEKLTSQ 272 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ + ++ KK IV +K D Sbjct: 273 DKKIAHYVTKKGKGIVIVFSKWD 295 >gi|74208202|dbj|BAE26317.1| unnamed protein product [Mus musculus] Length = 835 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 22/138 (15%) Query: 28 GPPEIAFSGRSNVGKSSLINIL----VNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P IA +G + GKSS IN L K+ A T + + PK L Sbjct: 471 APLNIAVTGETGTGKSSFINALRGISSEEKDAAPTGVIETTMKRTPYPHPK--------L 522 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + + D+PG G P +N YL+E + +I K+ID + Sbjct: 523 PNVTIWDLPGIGSTNFPPQN----------YLTEMKFGEYDFFIIISATRFKEIDAHLAK 572 Query: 144 FLDKKAVSYQIVLTKIDK 161 + K + + V TKID+ Sbjct: 573 AIAKMNIKFYFVRTKIDQ 590 >gi|121604778|ref|YP_982107.1| GTP-binding protein EngA [Polaromonas naphthalenivorans CJ2] gi|166225835|sp|A1VNF8|DER_POLNA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120593747|gb|ABM37186.1| small GTP-binding protein [Polaromonas naphthalenivorans CJ2] Length = 445 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 17/182 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A +GR NVGKS+LIN + + L + PG T+ VP + + K L+D Sbjct: 181 KLAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRD-AISVPFEHAGQK-----FELID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L V LL+D GV D + ++ + Sbjct: 234 TAGLRRKGKVFEAIEKFS--VVKTLQAIENANVVLLLLDATQGVTDQDAHIAGYILESGR 291 Query: 151 SYQIVLTK---IDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K +D Q ++E T+ + + H S++KR+G+ + K+I+ Sbjct: 292 AVVLAVNKWDAVDAYQRELLQRSIE-TRLGFLKFASIH----HISAIKRQGLGPVWKSII 346 Query: 208 ET 209 + Sbjct: 347 QA 348 >gi|30265502|ref|NP_847879.1| tRNA modification GTPase TrmE [Bacillus anthracis str. Ames] gi|49188321|ref|YP_031574.1| tRNA modification GTPase TrmE [Bacillus anthracis str. Sterne] gi|49480475|ref|YP_039474.1| tRNA modification GTPase TrmE [Bacillus thuringiensis serovar konkukian str. 97-27] gi|50196974|ref|YP_052661.1| tRNA modification GTPase TrmE [Bacillus anthracis str. 'Ames Ancestor'] gi|65317465|ref|ZP_00390424.1| COG0486: Predicted GTPase [Bacillus anthracis str. A2012] gi|165873022|ref|ZP_02217643.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0488] gi|167635055|ref|ZP_02393372.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0442] gi|167641744|ref|ZP_02399987.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0193] gi|170689483|ref|ZP_02880673.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0465] gi|170707531|ref|ZP_02897984.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0389] gi|177655270|ref|ZP_02936824.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0174] gi|190569290|ref|ZP_03022184.1| tRNA modification GTPase TrmE [Bacillus anthracis Tsiankovskii-I] gi|196036118|ref|ZP_03103518.1| tRNA modification GTPase TrmE [Bacillus cereus W] gi|196045402|ref|ZP_03112633.1| tRNA modification GTPase TrmE [Bacillus cereus 03BB108] gi|218906676|ref|YP_002454510.1| tRNA modification GTPase TrmE [Bacillus cereus AH820] gi|227818253|ref|YP_002818262.1| tRNA modification GTPase TrmE [Bacillus anthracis str. CDC 684] gi|228918096|ref|ZP_04081624.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930490|ref|ZP_04093490.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936764|ref|ZP_04099555.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228949206|ref|ZP_04111474.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229094595|ref|ZP_04225662.1| tRNA modification GTPase mnmE [Bacillus cereus Rock3-42] gi|229124987|ref|ZP_04254161.1| tRNA modification GTPase mnmE [Bacillus cereus 95/8201] gi|229600776|ref|YP_002869693.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0248] gi|254687075|ref|ZP_05150933.1| tRNA modification GTPase TrmE [Bacillus anthracis str. CNEVA-9066] gi|254724142|ref|ZP_05185927.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A1055] gi|254735159|ref|ZP_05192869.1| tRNA modification GTPase TrmE [Bacillus anthracis str. Western North America USA6153] gi|254742132|ref|ZP_05199819.1| tRNA modification GTPase TrmE [Bacillus anthracis str. Kruger B] gi|254755958|ref|ZP_05207990.1| tRNA modification GTPase TrmE [Bacillus anthracis str. Vollum] gi|254761362|ref|ZP_05213384.1| tRNA modification GTPase TrmE [Bacillus anthracis str. Australia 94] gi|301056958|ref|YP_003795169.1| tRNA modification GTPase TrmE [Bacillus anthracis CI] gi|46577421|sp|Q81JD9|MNME_BACAN RecName: Full=tRNA modification GTPase mnmE gi|81394076|sp|Q6HAF2|MNME_BACHK RecName: Full=tRNA modification GTPase mnmE gi|30260180|gb|AAP29365.1| tRNA modification GTPase TrmE [Bacillus anthracis str. Ames] gi|49182248|gb|AAT57624.1| tRNA modification GTPase TrmE [Bacillus anthracis str. Sterne] gi|49332031|gb|AAT62677.1| tRNA modification GTPase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|50083036|gb|AAT70169.1| tRNA modification GTPase TrmE [Bacillus anthracis str. 'Ames Ancestor'] gi|164711234|gb|EDR16790.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0488] gi|167510298|gb|EDR85701.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0193] gi|167529529|gb|EDR92279.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0442] gi|170127527|gb|EDS96401.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0389] gi|170666585|gb|EDT17358.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0465] gi|172080197|gb|EDT65289.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0174] gi|190559597|gb|EDV13588.1| tRNA modification GTPase TrmE [Bacillus anthracis Tsiankovskii-I] gi|195991285|gb|EDX55253.1| tRNA modification GTPase TrmE [Bacillus cereus W] gi|196023609|gb|EDX62285.1| tRNA modification GTPase TrmE [Bacillus cereus 03BB108] gi|218538645|gb|ACK91043.1| tRNA modification GTPase TrmE [Bacillus cereus AH820] gi|227004482|gb|ACP14225.1| tRNA modification GTPase TrmE [Bacillus anthracis str. CDC 684] gi|228658488|gb|EEL14154.1| tRNA modification GTPase mnmE [Bacillus cereus 95/8201] gi|228688842|gb|EEL42673.1| tRNA modification GTPase mnmE [Bacillus cereus Rock3-42] gi|228810489|gb|EEM56842.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228822973|gb|EEM68814.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829209|gb|EEM74846.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841576|gb|EEM86692.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265184|gb|ACQ46821.1| tRNA modification GTPase TrmE [Bacillus anthracis str. A0248] gi|300379127|gb|ADK08031.1| tRNA modification GTPase TrmE [Bacillus cereus biovar anthracis str. CI] Length = 458 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+++F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSETLTNEDEELFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D + +E A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDLPQAIDMERVIE---------LAAGNRVITTSLIEEQGIDELEKAI 374 >gi|294673439|ref|YP_003574055.1| tRNA modification GTPase TrmE [Prevotella ruminicola 23] gi|294472346|gb|ADE81735.1| tRNA modification GTPase TrmE [Prevotella ruminicola 23] Length = 448 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 30/192 (15%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G K G P +A G++NVGKS+L+N L+ + + A S+ G T+ +D ++ Sbjct: 208 ETGQALKQGIP-VAIVGKTNVGKSTLLNRLL-KDDRAIVSDVHGTTRD----TIEDTIDI 261 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 N +D G R + V+ G I R + R V LID ++I+ Sbjct: 262 --NGITFRFIDTAGI---RQTQDEVEQIG--ITRTYAAIDKARIVLWLIDAEPSTEEIN- 313 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 D+ + K + ++ K DK + Y + NYP I S+ GI Sbjct: 314 DILQHTENKKLI--VIKNKADK---------ADNNSYNLLNYP-----FITISAKFGTGI 357 Query: 200 EVLRKAILETIN 211 E L +AI E N Sbjct: 358 EELEQAIYEAAN 369 >gi|223888990|ref|ZP_03623581.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 64b] gi|223885806|gb|EEF56905.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 64b] Length = 433 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 10/143 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V E+G+ ++ G+ N GKS+LIN L + +A S+ PG T+ F+ F+ Sbjct: 163 VGEVGI-ESGADIKVGIIGKPNSGKSTLINYLSGNE-IAIVSDQPGTTRD---FIKTKFT 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD G + V+ + + R L + V+LLID + + Sbjct: 218 R---NGKVFEVVDTAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVQEKLTSQ 272 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ + ++ KK IV +K D Sbjct: 273 DKKIAHYVTKKGKGIVIVFSKWD 295 >gi|325962917|ref|YP_004240823.1| GTP-binding protein Era [Arthrobacter phenanthrenivorans Sphe3] gi|323469004|gb|ADX72689.1| GTP-binding protein Era [Arthrobacter phenanthrenivorans Sphe3] Length = 516 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 49/202 (24%), Positives = 78/202 (38%), Gaps = 29/202 (14%) Query: 14 FLRGVPEIGLLPKAGP----PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 LRG E G GP P +A GR NVGKS+L+N ++ R+ A + PG T+ Sbjct: 61 LLRG--EYGDEDFEGPVKLDPVLAIIGRPNVGKSTLVNRILGRRE-AVVEDTPGVTRDRV 117 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 + N +N LVD G+ + AR V + V V ++ Sbjct: 118 MYSAN--WNGRN----FTLVDTGGWEHDARGIHARVAEQAEMAVELAD------AVLFVV 165 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D G D+ V L + +V K+D + TL + E Sbjct: 166 DSAVGATATDEGVMKMLRRSKKPVIMVANKVDDFAQEADSATL---------WGLGFGEP 216 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 P S++ +G+ L +++ + Sbjct: 217 YPVSALHGRGVADLLDHVMDVL 238 >gi|289522946|ref|ZP_06439800.1| ribosome-associated GTPase EngA [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503489|gb|EFD24653.1| ribosome-associated GTPase EngA [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 443 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 12/130 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L N L+ +K +A + PG T+ + ++ ++ + LVD Sbjct: 8 VAIIGRANVGKSTLFNRLI-QKRMAIVDDIPGVTRD------RLYAQVEWAGKSFYLVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ P D G I R + E S + ++D R G+ +D + L + Sbjct: 61 GGFPNEDEPL--FDLVGKQIDRAIEEAS---VIIFVVDGREGILPLDFRIAEILRRSNRR 115 Query: 152 YQIVLTKIDK 161 + + KID+ Sbjct: 116 VIVAVNKIDE 125 >gi|229065143|ref|ZP_04200436.1| tRNA modification GTPase mnmE [Bacillus cereus AH603] gi|228716172|gb|EEL67891.1| tRNA modification GTPase mnmE [Bacillus cereus AH603] Length = 458 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 25/175 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDIVERIG--VERSKEMMSQADLVLIVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D QE +E+ L VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTD-----LPQEIDMERVTDL-----AVGNRVITTSLIEEQGIDELEKAI 374 >gi|330997747|ref|ZP_08321586.1| ribosome biogenesis GTPase Der [Paraprevotella xylaniphila YIT 11841] gi|329569846|gb|EGG51604.1| ribosome biogenesis GTPase Der [Paraprevotella xylaniphila YIT 11841] Length = 437 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR NVGKSSLIN + + ++A T+ T++ F DF Sbjct: 176 PRFAVVGRPNVGKSSLINAFIGEERNIVTDIAGTTRDSIYTRYTKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++F Sbjct: 226 --YLVDTAGIRRKNKVTEDLEYYS--VMRSIRAIENSDVCILMLDAERGIEAQDLNIFQL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEV 201 + + S +V+ K D L + + +Y IRN P + ++ K++ +V Sbjct: 282 IQRNNKSLVVVVNKWD-LVEEKNTVVMNEYEYAIRNRMAPFDDFPIIFASALTKQRIFKV 340 Query: 202 LRKA 205 L A Sbjct: 341 LETA 344 >gi|331654128|ref|ZP_08355128.1| putative histone [Escherichia coli M718] gi|331047510|gb|EGI19587.1| putative histone [Escherichia coli M718] Length = 290 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L LSE L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRNILSE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|321479416|gb|EFX90372.1| hypothetical protein DAPPUDRAFT_220043 [Daphnia pulex] Length = 279 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 27/190 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL--VDMPG 93 GRS +GKS+LIN L L RT + G + + + N + L D PG Sbjct: 4 GRSGLGKSTLINTLFRSSVLPRTCSVSGSEPAKTAEIRTTQTAIHENGIRLDLTVTDTPG 63 Query: 94 YG----------------YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 YG + K ++ G R++ + C+Y + HG++ + Sbjct: 64 YGDRIDNTNCWEPALEYINEQYEKYLIEEQGAERTRWIHDTRVHCCLYFIPPTGHGLRPL 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-----TLEKTKYLIRNYPTA---HPEVI 189 D +V L V+ V+ K D L+ QE + ++ I YP A HP+ Sbjct: 124 DLEVLQRL-HNVVNIIPVIAKADTLTLDERQEFKKNIQQDLARHRIGVYPLAKYDHPDDY 182 Query: 190 PTSSVKRKGI 199 + RK + Sbjct: 183 GVNESYRKMV 192 >gi|197302999|ref|ZP_03168047.1| hypothetical protein RUMLAC_01725 [Ruminococcus lactaris ATCC 29176] gi|197297854|gb|EDY32406.1| hypothetical protein RUMLAC_01725 [Ruminococcus lactaris ATCC 29176] Length = 442 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 11/158 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G+ NVGKSS+IN L+ +N S+ G T+ + + +N + Sbjct: 178 PRVAIVGKPNVGKSSIINRLLG-ENRVIVSDIAGTTRDAI------DTEIVHNGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R +S V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKNKIKEELERYS--IIRTVSAVERADVVLMVIDATEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAH 185 IV+ K D + T +E K + ++ P A Sbjct: 289 KGVIIVVNKWDAIEKNDKTMREYEAKIRQVLSYMPYAE 326 >gi|86142085|ref|ZP_01060609.1| GTP-binding protein EngA [Leeuwenhoekiella blandensis MED217] gi|85831648|gb|EAQ50104.1| GTP-binding protein EngA [Leeuwenhoekiella blandensis MED217] Length = 433 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 15/131 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ N L+ R+ A + G T+ + + N +++D Sbjct: 4 VAIVGRPNVGKSTFFNRLIQRRE-AIVDSVSGVTRD------RHYGKTDWNGKEFSVIDT 56 Query: 92 PGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 GY G ++ +D L + + ++D GV +D+DV + L +++ Sbjct: 57 GGYVRGSDDIFEEQIDKQVELAI------DEADAIIFMVDVEAGVTGMDEDVATLLRRQS 110 Query: 150 VSYQIVLTKID 160 +V+ K+D Sbjct: 111 KPVFLVVNKVD 121 >gi|294506233|ref|YP_003570291.1| GTPases [Salinibacter ruber M8] gi|294342561|emb|CBH23339.1| putative GTPases [Salinibacter ruber M8] Length = 505 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 30/184 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A + PG T+ + + + + LVD Sbjct: 76 VAIVGRPNVGKSTLFNRLTGSRQ-AIVEDTPGVTRD------RVYGEAEWKGHTIPLVDT 128 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSFLD 146 GY P+ + D + R + E++ + + ++D G+ ++D+++ + L Sbjct: 129 GGY----VPRSD-DPYE----RAIREQAEIALEDADVILFVVDVTTGITEMDKEIATVLR 179 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V K D + + +++ Y EV P SS ++G++ + A+ Sbjct: 180 PTETPVMVVANKADN-----EEREWDASEF----YQLGLGEVYPVSSTNKRGVDDMMAAL 230 Query: 207 LETI 210 +E + Sbjct: 231 VEEL 234 >gi|312112752|ref|YP_003991068.1| tRNA modification GTPase TrmE [Geobacillus sp. Y4.1MC1] gi|311217853|gb|ADP76457.1| tRNA modification GTPase TrmE [Geobacillus sp. Y4.1MC1] Length = 461 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ +N A ++ PG T+ V +++ N++ +P + L+D G Sbjct: 230 GRPNVGKSSLLNALVH-ENKAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLIDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + R + L+++ + D+ +F + K + + ++ Sbjct: 282 --RETEDIVERIG--VERSWQMLKEADLILLVLNYHEPLTAEDEKLFDMV--KGMDFIVI 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D +++ K L P +I TS + KGIE L AI Sbjct: 336 VNKTD----LPQHIDMDRVKQLAGGRP-----IITTSLLHEKGIEDLETAI 377 >gi|229159044|ref|ZP_04287100.1| tRNA modification GTPase mnmE [Bacillus cereus ATCC 4342] gi|228624463|gb|EEK81234.1| tRNA modification GTPase mnmE [Bacillus cereus ATCC 4342] Length = 458 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D + +E + VI TS ++ +GI+ L AI Sbjct: 330 IVIVNKTDLPQAIDMERVIELAE---------ENRVITTSLIEEQGIDELETAI 374 >gi|228473598|ref|ZP_04058350.1| ribosome-associated GTPase EngA [Capnocytophaga gingivalis ATCC 33624] gi|228274970|gb|EEK13780.1| ribosome-associated GTPase EngA [Capnocytophaga gingivalis ATCC 33624] Length = 434 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKN-LARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +A GR NVGKS+ N LV R+ + + + R +H + N +++D Sbjct: 5 VAIVGRPNVGKSTFFNRLVQRREAIVDSISGVTRDRH--------YGKTDWNGRDFSVID 56 Query: 91 MPGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 GY G +K +D L + + L D G+ ID+++ L + Sbjct: 57 TGGYVAGGDDIFQKEIDKQVNLAIEEAD------AIIFLTDVESGIMGIDEEIAQLLRRS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D + ++ ++ Y E+ P SSV G L A+++ Sbjct: 111 KKPTFLAVNKVD-----NTKRAIDANEF----YALGFEEIFPISSVNGSGTGELLDAVVK 161 >gi|238064002|ref|ZP_04608711.1| small GTP-binding protein [Micromonospora sp. ATCC 39149] gi|237885813|gb|EEP74641.1| small GTP-binding protein [Micromonospora sp. ATCC 39149] Length = 466 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 14/155 (9%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 T W+ LR P + GP P +A GR NVGKS+L+N ++ R+ A + PG T Sbjct: 1 MTDEGWVELR-EPAVDTEEPTGPMPVVAVVGRPNVGKSTLVNRIIGRRQ-AVVEDIPGVT 58 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + VP D + + A +VD G+ P D + + +T V Sbjct: 59 RDR---VPYD---AQWSGRAFTVVDTGGW----EPDAK-DRAAAIAAQAEIAVATADVVL 107 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 ++D G +D+ L + A +V K D Sbjct: 108 FVVDAMVGSTDVDEAAVKMLRRSAKPVILVANKAD 142 >gi|216264686|ref|ZP_03436678.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 156a] gi|215981159|gb|EEC21966.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 156a] Length = 433 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 10/143 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V E+G+ ++ G+ N GKS+LIN L + +A S+ PG T+ F+ F+ Sbjct: 163 VGEVGI-ESGADIKVGIIGKPNSGKSTLINYLSGNE-IAIVSDQPGTTRD---FIKTKFT 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD G + V+ + + R L + V+LLID + + Sbjct: 218 R---NGKVFEVVDTAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVQEKLTSQ 272 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ + ++ KK IV +K D Sbjct: 273 DKKIAHYVTKKGKGIVIVFSKWD 295 >gi|310659078|ref|YP_003936799.1| GTP-binding protein era [Clostridium sticklandii DSM 519] gi|308825856|emb|CBH21894.1| GTP-binding protein Era [Clostridium sticklandii] Length = 305 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 21/166 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N LV K +A S+ P T++ + D + + +D Sbjct: 16 VSIIGRPNVGKSTLMNSLVGEK-IAIMSDKPQTTRNQIRAIYND------DEMQIVFMDT 68 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + P+ + + L V + S R T + ++D + + D D+ L Sbjct: 69 PG---IQKPQNRLGDY-MLKVSHSSMRDT-DVILFVVDDSKSIGKKDSDIIETLKTNKSK 123 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVK 195 + + KIDKLS E+ LI Y E++P S++K Sbjct: 124 KILAINKIDKLSK-------EELMDLINMYSKIGIFDEIVPVSALK 162 >gi|256545944|ref|ZP_05473299.1| tRNA modification GTPase TrmE [Anaerococcus vaginalis ATCC 51170] gi|256398366|gb|EEU11988.1| tRNA modification GTPase TrmE [Anaerococcus vaginalis ATCC 51170] Length = 454 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 33/193 (17%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G L K G E G+ NVGKSSL+N+L+N +N A ++ PG T+ ++ NL N Sbjct: 214 GKLVKDGI-ETTIIGKPNVGKSSLLNVLLN-ENRAIVTDIPGTTRD----SITEYINLGN 267 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + + D G R V+ G + L+E + L + + D + D+ + Sbjct: 268 --LTLKINDTAGI---RETHDEVEKIGVQRSKELAEDADL--IIAIFDRSRKLDHEDKMI 320 Query: 142 FSFLDKKAVSYQIVLTKID---KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 L K + I+L KID K+S ++ ++I TS V R G Sbjct: 321 LDML--KGKNAIIILNKIDLDSKISKIDFDDSF---------------KIIETSMVSRDG 363 Query: 199 IEVLRKAILETIN 211 ++ L AI + + Sbjct: 364 VDKLEGAIFDIFD 376 >gi|170077787|ref|YP_001734425.1| tRNA modification GTPase TrmE [Synechococcus sp. PCC 7002] gi|205829178|sp|B1XKC3|MNME_SYNP2 RecName: Full=tRNA modification GTPase mnmE gi|169885456|gb|ACA99169.1| tRNA modification GTPase TrmE [Synechococcus sp. PCC 7002] Length = 460 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 26/178 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N +R + A ++ PG T+ + + + +P L D Sbjct: 223 KVAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLVVQGIPVQVL-D 275 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--DKK 148 G R + V+ G + R L+ + ID G DQ++F + K Sbjct: 276 TAGI---RDTEDAVEKIG--VARSLAASQQADLILFTIDAAVGWTAADQEIFQRIVATKA 330 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L KID P E +E P V+ T++ + +G++ L AI Sbjct: 331 NQPLILILNKIDIGQP----EAIE--------IPPQVQGVVKTAAAQHQGVDELETAI 376 >gi|84387629|ref|ZP_00990646.1| GTP-binding protein EngA [Vibrio splendidus 12B01] gi|84377474|gb|EAP94340.1| GTP-binding protein EngA [Vibrio splendidus 12B01] Length = 493 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+L N ++ + + + PG T+ + ++P ++ + L Sbjct: 205 PIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIP-----MQRDEREYVL 257 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + +V+ L V LLID R + D + F Sbjct: 258 IDTAGVRRRKNINETVEKFS--VVKTLKAIEDANVVLLLIDARDNISDQDLSLLGFALNA 315 Query: 149 AVSYQIVLTKIDKLS 163 S I + K D L Sbjct: 316 GRSIVIAVNKWDGLD 330 >gi|291087651|ref|ZP_06347028.2| ribosome-associated GTPase EngA [Clostridium sp. M62/1] gi|291074566|gb|EFE11930.1| ribosome-associated GTPase EngA [Clostridium sp. M62/1] Length = 446 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 11/158 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS++N L+ +N SN G T+ + + +N + Sbjct: 182 PRIAIVGKPNVGKSSIVNKLLG-ENRVIVSNIAGTTRDAV------DTEIVHNGTEYVFI 234 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + + Sbjct: 235 DTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHDRG 292 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAH 185 IV+ K D + T E K K ++ P A Sbjct: 293 KGIIIVVNKWDAIEKNDKTIYEYTNKIKTILSFVPYAE 330 >gi|104780244|ref|YP_606742.1| GTP-binding protein EngA [Pseudomonas entomophila L48] gi|166225841|sp|Q1IEH7|DER_PSEE4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|95109231|emb|CAK13928.1| GTP-binding protein EngA [Pseudomonas entomophila L48] Length = 488 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 14/142 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + + PG T+ + ++P + + Sbjct: 186 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDQPGTTRD-SIYIP-----FERD 238 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +D G + V+ + +V+ L V ++D R GV D ++ Sbjct: 239 GEKYTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLL 296 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 F + I L K D + P Sbjct: 297 GFALDAGRAVVIALNKWDGMEP 318 >gi|331002253|ref|ZP_08325772.1| GTP-binding protein engA [Lachnospiraceae oral taxon 107 str. F0167] gi|330411347|gb|EGG90763.1| GTP-binding protein engA [Lachnospiraceae oral taxon 107 str. F0167] Length = 443 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 9/109 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L +N S+ G T+ V + NN + Sbjct: 179 PRIAIVGKPNVGKSSIINRLTG-QNRVIVSDIAGTTRDAIDTV------VVNNKQEYVFI 231 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 D G K++++ + I+R ++ V L+ID GV + D Sbjct: 232 DTAGLRRKSKVKEDIERYS--IIRTVTAVERADVVILVIDANEGVTEQD 278 >gi|323700635|ref|ZP_08112547.1| tRNA modification GTPase TrmE [Desulfovibrio sp. ND132] gi|323460567|gb|EGB16432.1| tRNA modification GTPase TrmE [Desulfovibrio desulfuricans ND132] Length = 463 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 16/100 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA--LV 89 + +GR N GKSSL+N L+ R N A ++ PG T +D+ NL ++ L Sbjct: 228 VVLAGRVNAGKSSLMNALLGR-NRAIVTDRPGTT--------RDYLEETLNLDGLSIRLA 278 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 D G RA V++ G + R L +R+ L V LL+D Sbjct: 279 DTAGM---RATDDAVEAAGLEMGRELRDRAAL--VLLLLD 313 >gi|312898938|ref|ZP_07758326.1| ribosome-associated GTPase EngA [Megasphaera micronuciformis F0359] gi|310620100|gb|EFQ03672.1| ribosome-associated GTPase EngA [Megasphaera micronuciformis F0359] Length = 442 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 14/136 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +V +K ++ + PG T+ +F D L L+ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIV-KKRISIVEDLPGVTRDRIYF---DAEWLGREF---TLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL--IDCRHGVKQIDQDVFSFLDK 147 D G + + S +RY +E + +L +D + G++ DQ++ + L Sbjct: 57 DTGGIEFVDSDNNIFTS-----MRYQAELAIHEADVILYVVDGKTGIQPQDQEIAAMLRA 111 Query: 148 KAVSYQIVLTKIDKLS 163 +V+ KID + Sbjct: 112 SGKPVILVVNKIDSVE 127 >gi|296444864|ref|ZP_06886826.1| GTP-binding protein Era [Methylosinus trichosporium OB3b] gi|296257532|gb|EFH04597.1| GTP-binding protein Era [Methylosinus trichosporium OB3b] Length = 312 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 12/129 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N LV A+ S + Q V + ++ + LVD Sbjct: 22 VALVGAPNAGKSTLLNQLVG----AKVSIVSRKAQTTRALVRGIAISGESQI---ILVDT 74 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ ++ ++ LS V LLID R G+ +++ + L++ + Sbjct: 75 PGI---FAPKRRLER--AMVASALSGAGDADAVVLLIDARRGLDAEVEEIIAKLNELSAP 129 Query: 152 YQIVLTKID 160 +VL K+D Sbjct: 130 KILVLNKVD 138 >gi|270156684|ref|ZP_06185341.1| putative GTP-binding protein EngA [Legionella longbeachae D-4968] gi|289164869|ref|YP_003455007.1| GTPase involved in ribosome synthesis and maintenance [Legionella longbeachae NSW150] gi|269988709|gb|EEZ94963.1| putative GTP-binding protein EngA [Legionella longbeachae D-4968] gi|288858042|emb|CBJ11902.1| GTPase involved in ribosome synthesis and maintenance [Legionella longbeachae NSW150] Length = 466 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + +++ +V Sbjct: 3 PVIALVGRPNVGKSTLFNKLTKTQD-ALVADYPGLTR------DRQYGQAQHDDKHYIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G ++ S I + ++ V L+D R G+ ID+ + + L K Sbjct: 56 DTGGIGIDDIAVDSLMSKQSEIALHEAD-----IVLFLVDGRDGLTGIDEKIATNLRKLN 110 Query: 150 VSYQIVLTKIDKLSPTTA 167 +V+ K + L A Sbjct: 111 KKVHLVVNKTEGLDDDIA 128 Score = 38.9 bits (89), Expect = 0.48, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 13/158 (8%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 VP+ + + +IAF+GR NVGKS+LIN ++ + + + PG T+ + +P Sbjct: 163 VPQCEKVEEMHAIKIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRD-SIAIPFARD 220 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N + L+D G + ++ + + E S + C+ LL D G+ Sbjct: 221 NQQ-----YVLIDTAGVRRKSRIDEKIEKFSVIKTLKAIEESNV-CLQLL-DANEGITDQ 273 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 D ++ F+ + + I + K D L +E EK K Sbjct: 274 DMNLLGFIIESGKALVIAVNKWDGLD----EEHKEKIK 307 >gi|218530504|ref|YP_002421320.1| GTP-binding protein Era [Methylobacterium chloromethanicum CM4] gi|240138863|ref|YP_002963338.1| GTP-binding protein [Methylobacterium extorquens AM1] gi|218522807|gb|ACK83392.1| GTP-binding protein Era [Methylobacterium chloromethanicum CM4] gi|240008835|gb|ACS40061.1| GTP-binding protein [Methylobacterium extorquens AM1] Length = 326 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N LV A+ S + Q V + + LVD Sbjct: 36 VALIGVPNAGKSTLLNALVG----AKVSIVSRKVQTTRALV---RGIVMEGNAQIVLVDT 88 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ +D ++ S + + LLID R GV + + + L + Sbjct: 89 PGIF---APKRRLDR--AMVHSAWSGAADADAICLLIDARKGVDEEVETILRRLPEVKRP 143 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L KID ++ E + K ++ + S++K GI LRKA+ Sbjct: 144 KILILNKIDLIARERLLELVAKLNAMV-----PFEDTFLISALKGDGIADLRKAL 193 >gi|148984151|ref|ZP_01817446.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP3-BS71] gi|147923440|gb|EDK74553.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP3-BS71] gi|301800517|emb|CBW33156.1| GTP-binding protein EngA [Streptococcus pneumoniae OXC141] Length = 436 Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 19/158 (12%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 169 EENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDGQ- 223 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G + +N + + + +RS + V ++I+ G+++ D+ + Sbjct: 224 -EFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVINAEEGIREYDKRIAG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++N+ Sbjct: 281 FAHEAGKGMIIVVNKWD---------TLEKDNHTMKNW 309 >gi|295091914|emb|CBK78021.1| ribosome-associated GTPase EngA [Clostridium cf. saccharolyticum K10] Length = 444 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 11/158 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS++N L+ +N SN G T+ + + +N + Sbjct: 180 PRIAIVGKPNVGKSSIVNKLLG-ENRVIVSNIAGTTRDAV------DTEIVHNGTEYVFI 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + + Sbjct: 233 DTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHDRG 290 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAH 185 IV+ K D + T E K K ++ P A Sbjct: 291 KGIIIVVNKWDAIEKNDKTIYEYTNKIKTILSFVPYAE 328 Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 29/183 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L + ++ + PG T+ + +++ A L+ Sbjct: 6 PVVAVVGRPNVGKSTLFNVLAG-EMISIVKDTPGVTRD------RIYADCTWLDKAFTLI 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-----STLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P +I+ + E+ +T + ++D R G+ D V Sbjct: 59 DTGGI----EPDSR-----DIILAQMREQAEIAIATADVIIFIVDVRQGLTDSDSKVADM 109 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K + + K+D + Y N P IP S+ R G+ L Sbjct: 110 LRKSRKPVILAVNKVDSFAK------FGNDVYEFYNLGIGDP--IPISAASRLGLGELLD 161 Query: 205 AIL 207 A++ Sbjct: 162 AVV 164 >gi|148994026|ref|ZP_01823382.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP9-BS68] gi|168484900|ref|ZP_02709845.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1873-00] gi|168488574|ref|ZP_02712773.1| GTP-binding protein EngA [Streptococcus pneumoniae SP195] gi|307127923|ref|YP_003879954.1| GTP-binding protein EngA [Streptococcus pneumoniae 670-6B] gi|147927493|gb|EDK78521.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP9-BS68] gi|172041949|gb|EDT49995.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1873-00] gi|183572668|gb|EDT93196.1| GTP-binding protein EngA [Streptococcus pneumoniae SP195] gi|306484985|gb|ADM91854.1| GTP-binding protein EngA [Streptococcus pneumoniae 670-6B] gi|332072538|gb|EGI83021.1| GTP-binding protein engA [Streptococcus pneumoniae GA17570] gi|332072881|gb|EGI83362.1| GTP-binding protein engA [Streptococcus pneumoniae GA17545] Length = 436 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 19/158 (12%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 169 EENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDGQ- 223 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G + +N + + ++R + V ++I+ G+++ D+ + Sbjct: 224 -EFTMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVINAEEGIREYDKRIAG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++N+ Sbjct: 281 FAHEAGKGMIIVVNKWD---------TLEKDNHTMKNW 309 >gi|332201131|gb|EGJ15202.1| GTP-binding protein engA [Streptococcus pneumoniae GA47901] Length = 436 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 19/158 (12%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 169 EENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDGQ- 223 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G + +N + + ++R + V ++I+ G+++ D+ + Sbjct: 224 -EFTMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVINAEEGIREYDKRIAG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++N+ Sbjct: 281 FAHEAGKGMIIVVNKWD---------TLEKDNHTMKNW 309 >gi|291550925|emb|CBL27187.1| ribosome-associated GTPase EngA [Ruminococcus torques L2-14] Length = 442 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 11/158 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L+ +N SN G T+ + + ++ + Sbjct: 178 PRIAIVGKPNVGKSSIINRLLG-ENRVIVSNIAGTTRDAI------DTEIVHDGKEYIFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R +S V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKNKIKEELERYS--IIRTVSAVERADVVLMVIDATEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAH 185 IV+ K D + T +E K + ++ P A Sbjct: 289 KGVIIVVNKWDAIEKNDKTMKEYEGKIRQVLSYMPYAE 326 >gi|149006625|ref|ZP_01830324.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP18-BS74] gi|147761923|gb|EDK68886.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP18-BS74] Length = 358 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 172 PDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++I+ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVINAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++N+ Sbjct: 284 EAGKGMIIVVNKWD---------TLEKDNHTMKNW 309 >gi|91792618|ref|YP_562269.1| GTP-binding protein EngA [Shewanella denitrificans OS217] gi|122968866|sp|Q12PT0|DER_SHEDO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|91714620|gb|ABE54546.1| Small GTP-binding protein domain [Shewanella denitrificans OS217] Length = 491 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 9/137 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+LIN ++ + + +APG T+ + ++P ++ L Sbjct: 199 PIKLAIIGKPNVGKSTLINRILGEERVV-VYDAPGTTRD-SIYIP-----MEREGREYVL 251 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +++ L V L++D R G+ + D + F Sbjct: 252 IDTAGVRRRSKVHEVIEKFS--VIKTLKAVEDANVVLLVVDAREGIAEQDLGLLGFTLNA 309 Query: 149 AVSYQIVLTKIDKLSPT 165 + I + K D + T Sbjct: 310 GRALVIAVNKWDGIDQT 326 >gi|289433056|ref|YP_003462929.1| ribosome-associated GTPase EngA [Dehalococcoides sp. GT] gi|288946776|gb|ADC74473.1| ribosome-associated GTPase EngA [Dehalococcoides sp. GT] Length = 442 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 14/141 (9%) Query: 25 PKAGPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 P A P E +A GR+NVGKS+L+N + + + SN PG T+ P DF Sbjct: 171 PIATPEEDTSVKLALVGRTNVGKSTLLNTFLGEER-SVVSNIPGTTRD-AIDTPLDFDGT 228 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + L+D G + V+ + ++R L V L++D V D Sbjct: 229 N-----VLLIDTAGIRRRGKVESGVEKYS--VLRALKAIDRADVVLLVMDTEELVTAQDT 281 Query: 140 DVFSFLDKKAVSYQIVLTKID 160 + ++ A I+L K D Sbjct: 282 HIAGYVRDTAKGIIIILNKWD 302 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P IA GR NVGKS+L+N L + KNLA T + PG T+ F Sbjct: 7 PIIAIVGRQNVGKSTLLNRLAH-KNLAITEDLPGTTRDRLF 46 >gi|255534810|ref|YP_003095181.1| GTP-binding protein EngA [Flavobacteriaceae bacterium 3519-10] gi|255341006|gb|ACU07119.1| GTP-binding protein EngA [Flavobacteriaceae bacterium 3519-10] Length = 436 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 11/137 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G P+I +GR NVGKS+L N L++++ T A G T+ L N Sbjct: 171 PFEGLPKITIAGRPNVGKSTLTNALLDKQQNIVTDVA-GTTRD-------SIQTLYNKFG 222 Query: 85 -AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD G K++++ + ++R + V +++D G + D ++F Sbjct: 223 HEFVLVDTAGMRRKAKVKEDLEFYS--VMRSIRSIEYSDVVIIMVDATLGWESQDMNIFG 280 Query: 144 FLDKKAVSYQIVLTKID 160 K IV+ K D Sbjct: 281 LAQKNRKGIVIVVNKWD 297 >gi|15901543|ref|NP_346147.1| GTP-binding protein EngA [Streptococcus pneumoniae TIGR4] gi|15903596|ref|NP_359146.1| GTP-binding protein EngA [Streptococcus pneumoniae R6] gi|111657418|ref|ZP_01408170.1| hypothetical protein SpneT_02001366 [Streptococcus pneumoniae TIGR4] gi|116515879|ref|YP_816974.1| GTP-binding protein EngA [Streptococcus pneumoniae D39] gi|148989364|ref|ZP_01820732.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP6-BS73] gi|148997762|ref|ZP_01825326.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP11-BS70] gi|149011426|ref|ZP_01832673.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP19-BS75] gi|149020788|ref|ZP_01835317.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP23-BS72] gi|168487543|ref|ZP_02712051.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1087-00] gi|168491409|ref|ZP_02715552.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC0288-04] gi|168493616|ref|ZP_02717759.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC3059-06] gi|168575101|ref|ZP_02721064.1| GTP-binding protein EngA [Streptococcus pneumoniae MLV-016] gi|169832823|ref|YP_001695085.1| GTP-binding protein EngA [Streptococcus pneumoniae Hungary19A-6] gi|182684651|ref|YP_001836398.1| GTP-binding protein EngA [Streptococcus pneumoniae CGSP14] gi|194398265|ref|YP_002038320.1| GTP-binding protein EngA [Streptococcus pneumoniae G54] gi|221232445|ref|YP_002511598.1| GTP-binding protein EngA [Streptococcus pneumoniae ATCC 700669] gi|225855139|ref|YP_002736651.1| GTP-binding protein EngA [Streptococcus pneumoniae JJA] gi|225857322|ref|YP_002738833.1| GTP-binding protein EngA [Streptococcus pneumoniae P1031] gi|225859462|ref|YP_002740972.1| GTP-binding protein EngA [Streptococcus pneumoniae 70585] gi|225861533|ref|YP_002743042.1| GTP-binding protein EngA [Streptococcus pneumoniae Taiwan19F-14] gi|237649250|ref|ZP_04523502.1| GTP-binding protein EngA [Streptococcus pneumoniae CCRI 1974] gi|237822010|ref|ZP_04597855.1| GTP-binding protein EngA [Streptococcus pneumoniae CCRI 1974M2] gi|289167434|ref|YP_003445703.1| phosphoglycerate dehydrogenase-related protein, GTP-binding protein [Streptococcus mitis B6] gi|298229308|ref|ZP_06962989.1| GTP-binding protein EngA [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255748|ref|ZP_06979334.1| GTP-binding protein EngA [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503453|ref|YP_003725393.1| GTP-binding protein EngA [Streptococcus pneumoniae TCH8431/19A] gi|303254319|ref|ZP_07340427.1| GTP-binding protein EngA [Streptococcus pneumoniae BS455] gi|303258643|ref|ZP_07344623.1| GTP-binding protein EngA [Streptococcus pneumoniae SP-BS293] gi|303261806|ref|ZP_07347752.1| GTP-binding protein EngA [Streptococcus pneumoniae SP14-BS292] gi|303263670|ref|ZP_07349592.1| GTP-binding protein EngA [Streptococcus pneumoniae BS397] gi|303266846|ref|ZP_07352725.1| GTP-binding protein EngA [Streptococcus pneumoniae BS457] gi|303269910|ref|ZP_07355651.1| GTP-binding protein EngA [Streptococcus pneumoniae BS458] gi|307068334|ref|YP_003877300.1| putative GTPase [Streptococcus pneumoniae AP200] gi|307705427|ref|ZP_07642284.1| small GTP-binding domain protein [Streptococcus mitis SK597] gi|307707485|ref|ZP_07643967.1| GTP-binding protein EngA [Streptococcus mitis NCTC 12261] gi|307709642|ref|ZP_07646094.1| small GTP-binding domain protein [Streptococcus mitis SK564] gi|322377454|ref|ZP_08051945.1| ribosome-associated GTPase EngA [Streptococcus sp. M334] gi|54037053|sp|P64063|DER_STRR6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|54040976|sp|P64062|DER_STRPN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|122278180|sp|Q04J64|DER_STRP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238688353|sp|B1I766|DER_STRPI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238690849|sp|B5E756|DER_STRP4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238691183|sp|B2IRW4|DER_STRPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783168|sp|C1C8U6|DER_STRP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783169|sp|B8ZMH4|DER_STRPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783171|sp|C1CFT0|DER_STRZJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783172|sp|C1CM45|DER_STRZP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783173|sp|C1CSX0|DER_STRZT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|14973204|gb|AAK75787.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae TIGR4] gi|15459218|gb|AAL00357.1| Phosphoglycerate dehydrogenase [Streptococcus pneumoniae R6] gi|116076455|gb|ABJ54175.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae D39] gi|147756261|gb|EDK63303.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP11-BS70] gi|147764416|gb|EDK71347.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP19-BS75] gi|147925114|gb|EDK76194.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP6-BS73] gi|147930429|gb|EDK81412.1| phosphoglycerate dehydrogenase-related protein [Streptococcus pneumoniae SP23-BS72] gi|168995325|gb|ACA35937.1| GTP-binding protein EngA [Streptococcus pneumoniae Hungary19A-6] gi|182629985|gb|ACB90933.1| GTP-binding protein EngA [Streptococcus pneumoniae CGSP14] gi|183569654|gb|EDT90182.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC1087-00] gi|183574158|gb|EDT94686.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC0288-04] gi|183576280|gb|EDT96808.1| GTP-binding protein EngA [Streptococcus pneumoniae CDC3059-06] gi|183578800|gb|EDT99328.1| GTP-binding protein EngA [Streptococcus pneumoniae MLV-016] gi|194357932|gb|ACF56380.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae G54] gi|220674906|emb|CAR69481.1| GTP-binding protein EngA [Streptococcus pneumoniae ATCC 700669] gi|225721482|gb|ACO17336.1| GTP-binding protein EngA [Streptococcus pneumoniae 70585] gi|225723540|gb|ACO19393.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae JJA] gi|225724777|gb|ACO20629.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae P1031] gi|225727275|gb|ACO23126.1| ribosome-associated GTPase EngA [Streptococcus pneumoniae Taiwan19F-14] gi|288907001|emb|CBJ21835.1| phosphoglycerate dehydrogenase-related protein, GTP-binding protein [Streptococcus mitis B6] gi|298239048|gb|ADI70179.1| GTP-binding protein EngA [Streptococcus pneumoniae TCH8431/19A] gi|301794686|emb|CBW37137.1| GTP-binding protein EngA [Streptococcus pneumoniae INV104] gi|301802409|emb|CBW35163.1| GTP-binding protein EngA [Streptococcus pneumoniae INV200] gi|302598670|gb|EFL65708.1| GTP-binding protein EngA [Streptococcus pneumoniae BS455] gi|302636889|gb|EFL67378.1| GTP-binding protein EngA [Streptococcus pneumoniae SP14-BS292] gi|302640144|gb|EFL70599.1| GTP-binding protein EngA [Streptococcus pneumoniae SP-BS293] gi|302640564|gb|EFL70970.1| GTP-binding protein EngA [Streptococcus pneumoniae BS458] gi|302643614|gb|EFL73882.1| GTP-binding protein EngA [Streptococcus pneumoniae BS457] gi|302646708|gb|EFL76933.1| GTP-binding protein EngA [Streptococcus pneumoniae BS397] gi|306409871|gb|ADM85298.1| Predicted GTPase [Streptococcus pneumoniae AP200] gi|307616437|gb|EFN95628.1| GTP-binding protein EngA [Streptococcus mitis NCTC 12261] gi|307619540|gb|EFN98664.1| small GTP-binding domain protein [Streptococcus mitis SK564] gi|307621026|gb|EFO00106.1| small GTP-binding domain protein [Streptococcus mitis SK597] gi|321281654|gb|EFX58663.1| ribosome-associated GTPase EngA [Streptococcus sp. M334] gi|327389894|gb|EGE88239.1| GTP-binding protein engA [Streptococcus pneumoniae GA04375] gi|332074047|gb|EGI84525.1| GTP-binding protein engA [Streptococcus pneumoniae GA41301] gi|332199734|gb|EGJ13809.1| GTP-binding protein engA [Streptococcus pneumoniae GA41317] gi|332200267|gb|EGJ14340.1| GTP-binding protein engA [Streptococcus pneumoniae GA47368] Length = 436 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 19/158 (12%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 169 EENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDGQ- 223 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G + +N + + ++R + V ++I+ G+++ D+ + Sbjct: 224 -EFTMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVINAEEGIREYDKRIAG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++N+ Sbjct: 281 FAHEAGKGMIIVVNKWD---------TLEKDNHTMKNW 309 >gi|198283717|ref|YP_002220038.1| GTP-binding protein EngA [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667499|ref|YP_002426346.1| ribosome-associated GTPase EngA [Acidithiobacillus ferrooxidans ATCC 23270] gi|226741127|sp|B7JC34|DER_ACIF2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238690897|sp|B5EJF7|DER_ACIF5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|198248238|gb|ACH83831.1| small GTP-binding protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519712|gb|ACK80298.1| ribosome-associated GTPase EngA [Acidithiobacillus ferrooxidans ATCC 23270] Length = 449 Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 25/184 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L+N ++ K + + PG T+ + +P + + P + ++ Sbjct: 178 PRIAMLGRPNVGKSTLVNTMLGEKRVL-VFDEPGTTRD-SIRIPYE----RQGKPYV-MI 230 Query: 90 DMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 D G ++ GL +++ LS V L++D R G+ + D + Sbjct: 231 DTAGM------RRRARVGEGLEKLSVLKTLSALREADVVLLVLDARLGIAEQDAHLVGVA 284 Query: 146 DKKAVSYQIVLTKIDKLSPT---TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V+ K D ++P ++ LE+ IR P V S++ G+ L Sbjct: 285 VELGRPIVVVVNKWDGMTPEERKAVKQELERRLDFIRYAP-----VYTISALHGTGVGDL 339 Query: 203 RKAI 206 K+I Sbjct: 340 YKSI 343 >gi|183597426|ref|ZP_02958919.1| hypothetical protein PROSTU_00690 [Providencia stuartii ATCC 25827] gi|183601093|ref|ZP_02962586.1| hypothetical protein PROSTU_04720 [Providencia stuartii ATCC 25827] gi|188019435|gb|EDU57475.1| hypothetical protein PROSTU_04720 [Providencia stuartii ATCC 25827] gi|188023258|gb|EDU61298.1| hypothetical protein PROSTU_00690 [Providencia stuartii ATCC 25827] Length = 290 Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust. Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 33/199 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G++ GKSSL+N L + L+ S+ G T+ + FS NN + + Sbjct: 34 PTIGLMGKTGAGKSSLLNALF-QSQLSPVSDVSGCTRQ-----AQRFSMTMNN-HTLTFI 86 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PG G + K + L L E L + ++ D+ + FL KK Sbjct: 87 DLPGVGESLERDK---EYHQLYRNLLPE---LDLIIWVLKADDRAWSSDEQCYRFLTKKC 140 Query: 150 VSYQ-----IVLTKIDKLSPT----------TAQETLE---KTKYLIRNYPTAHPEVIPT 191 YQ VL + DK+ P ++++T K + +I + HP VI Sbjct: 141 -GYQPNQFLFVLNQADKIEPCRQWDEYKHQPSSEQTYNLKLKQQAVITAFKPHHP-VITV 198 Query: 192 SSVKRKGIEVLRKAILETI 210 S+V+ + L + +++ + Sbjct: 199 SAVENYQLTELAEQLIQAL 217 >gi|82658250|ref|NP_001032456.1| septin 4a [Danio rerio] gi|81097782|gb|AAI09429.1| Septin 4a [Danio rerio] Length = 476 Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 44/188 (23%) Query: 32 IAFSGRSNVGKSSLIN--ILVNRKNLARTSNAPGR-------TQHLNFFVPKDFSNLKNN 82 + +G S +GKS+L+N L + + NA R T+H V + +K Sbjct: 139 LMVAGESGLGKSTLVNSLFLTDLYKDRKMPNAEERIAQTVEITKHT---VAIEEKGVKLR 195 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLI-------VRYLSERSTLR-----------CV 124 L +VD PG+G A N +SW ++ +Y + S L C+ Sbjct: 196 L---TIVDTPGFGDA---VNNTESWRAIVDYIDQQFEQYFRDESGLNRKNIQDNRVHCCL 249 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-------QETLEKTKYL 177 Y + HG++ ID + L +K V+ VL K D L+P +E +E+ + Sbjct: 250 YFISPFGHGLRPIDVEFMKILHEK-VNIVPVLAKTDSLTPEDVRKMKMKIREEIERFDIM 308 Query: 178 IRNYPTAH 185 I +P Sbjct: 309 IYQFPECE 316 >gi|170758742|ref|YP_001788985.1| tRNA modification GTPase TrmE [Clostridium botulinum A3 str. Loch Maree] gi|205829144|sp|B1KUB2|MNME_CLOBM RecName: Full=tRNA modification GTPase mnmE gi|169405731|gb|ACA54142.1| tRNA modification GTPase TrmE [Clostridium botulinum A3 str. Loch Maree] Length = 461 Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 22/171 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+N +N A + PG T+ V +++ N+ + +P + +VD G Sbjct: 230 GKPNVGKSSLLNALIN-ENKAIVTEIPGTTRD----VIEEYINI-DGIP-IKIVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + + + V ++D + + D ++ F+ K Y ++ Sbjct: 282 --RETEDVVEKIG--VEKSKEKIDEADLVIFMLDLSRKIDEEDIEIMDFIKNK--KYIVL 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L K+D + L + + I+ + + +I TS G+ L++ I Sbjct: 336 LNKLD------LNKDLNEENHFIKELDSKY--IIKTSVKNNSGLNELKECI 378 >gi|104779829|ref|YP_606327.1| selenocysteinyl-tRNA-specific translation factor [Pseudomonas entomophila L48] gi|95108816|emb|CAK13512.1| selenocysteinyl-tRNA-specific translation factor [Pseudomonas entomophila L48] Length = 640 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 19/178 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSN-APGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +G + GK++L+ L + R A G T L + ++ L P +D Sbjct: 3 VGTAGHIDHGKTALLQALTGQAGDTRQEERARGMTIDLGY----RYAALAEGAPLTGFID 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ I L+ + V L++ GV ++ S ++ + Sbjct: 59 VPGHER-------------FIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLSIIELLGI 105 Query: 151 SYQ-IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V++K D++ P E + L+ P A P SS+ +GI LR+A+L Sbjct: 106 PQALVVISKCDRVEPARLSEVQAQVTELLAPGPYAGARQFPVSSLSGEGIGALREALL 163 >gi|324501293|gb|ADY40578.1| Eukaryotic translation initiation factor 5B [Ascaris suum] Length = 1182 Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 31/147 (21%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFS 77 P I G + GK+ +++ + R+ + A G TQ + VP ++F Sbjct: 594 PVICVLGHVDTGKTKMLDTI--RRTNVQDGEAGGITQQIGATQVPAAAIKERTKMVREFD 651 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY--LLIDCRHGVK 135 K +P ++D PG+ +S+ L R + C Y L++D HG++ Sbjct: 652 GDKMKIPGFLIIDTPGH----------ESFSNL-----RSRGSSLCDYAILVVDLMHGLE 696 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKL 162 Q + L K+ + I L KID+L Sbjct: 697 QQTLESLKLLRKRETPFVIALNKIDRL 723 >gi|300118814|ref|ZP_07056534.1| tRNA modification GTPase TrmE [Bacillus cereus SJ1] gi|298723782|gb|EFI64504.1| tRNA modification GTPase TrmE [Bacillus cereus SJ1] Length = 458 Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+++F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSETLTNEDEELFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D + +E A VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTDLPQSIDMERVIE---------LAAGNRVITTSLIEEQGIDELEKAI 374 >gi|184201166|ref|YP_001855373.1| GTP-binding protein EngA [Kocuria rhizophila DC2201] gi|183581396|dbj|BAG29867.1| GTP-binding protein EngA [Kocuria rhizophila DC2201] Length = 499 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 72/170 (42%), Gaps = 23/170 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L+N ++ R+ A + PG T+ + K N KN LV Sbjct: 62 PVVAVVGRPNVGKSTLVNRVIGRRE-AVVEDTPGVTRDRVSY--KAEWNGKN----FTLV 114 Query: 90 DMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G+ A+ K V L V+ V L++D GV D+ V + L + Sbjct: 115 DTGGWEQDAKGINKRVADQAELAVQNAD------AVLLVLDVTVGVTATDEGVVNMLRRV 168 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +V K D SP Q +E T + E P S++ KG Sbjct: 169 KKPIIVVANKAD--SP---QLEIEATAL----WSLGMGEPFPVSALHGKG 209 >gi|168183721|ref|ZP_02618385.1| tRNA modification GTPase TrmE [Clostridium botulinum Bf] gi|237797100|ref|YP_002864652.1| tRNA modification GTPase TrmE [Clostridium botulinum Ba4 str. 657] gi|182673145|gb|EDT85106.1| tRNA modification GTPase TrmE [Clostridium botulinum Bf] gi|229263227|gb|ACQ54260.1| tRNA modification GTPase TrmE [Clostridium botulinum Ba4 str. 657] Length = 461 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 22/171 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+N +N A + PG T+ V +++ N+ + +P + +VD G Sbjct: 230 GKPNVGKSSLLNALIN-ENKAIVTEIPGTTRD----VIEEYINI-DGIP-IKIVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + + + V ++D + + D ++ F+ K Y ++ Sbjct: 282 --RETEDVVEKIG--VEKSKEKIDEADLVIFMLDLSREIDEEDIEIMDFIKNK--KYIVL 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L K+D + L + + I+ + + +I TS G+ L++ I Sbjct: 336 LNKLD------LNKDLNEENHFIKELDSKY--IIKTSVKNNSGLNELKECI 378 >gi|148381580|ref|YP_001256121.1| tRNA modification GTPase TrmE [Clostridium botulinum A str. ATCC 3502] gi|153931640|ref|YP_001385957.1| tRNA modification GTPase TrmE [Clostridium botulinum A str. ATCC 19397] gi|153937169|ref|YP_001389364.1| tRNA modification GTPase TrmE [Clostridium botulinum A str. Hall] gi|168181110|ref|ZP_02615774.1| tRNA modification GTPase TrmE [Clostridium botulinum NCTC 2916] gi|170756593|ref|YP_001783278.1| tRNA modification GTPase TrmE [Clostridium botulinum B1 str. Okra] gi|226951095|ref|YP_002806186.1| tRNA modification GTPase TrmE [Clostridium botulinum A2 str. Kyoto] gi|166200473|sp|A7FPM0|MNME_CLOB1 RecName: Full=tRNA modification GTPase mnmE gi|166200474|sp|A5I816|MNME_CLOBH RecName: Full=tRNA modification GTPase mnmE gi|205829143|sp|B1IHR9|MNME_CLOBK RecName: Full=tRNA modification GTPase mnmE gi|148291064|emb|CAL85201.1| probable tRNA modification GTPase [Clostridium botulinum A str. ATCC 3502] gi|152927684|gb|ABS33184.1| tRNA modification GTPase TrmE [Clostridium botulinum A str. ATCC 19397] gi|152933083|gb|ABS38582.1| tRNA modification GTPase TrmE [Clostridium botulinum A str. Hall] gi|169121805|gb|ACA45641.1| tRNA modification GTPase TrmE [Clostridium botulinum B1 str. Okra] gi|182668135|gb|EDT80114.1| tRNA modification GTPase TrmE [Clostridium botulinum NCTC 2916] gi|226841162|gb|ACO83828.1| tRNA modification GTPase TrmE [Clostridium botulinum A2 str. Kyoto] gi|322807967|emb|CBZ05542.1| GTPase and tRNA-U34 5-formylation enzyme TrmE [Clostridium botulinum H04402 065] Length = 461 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 22/171 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+N +N A + PG T+ V +++ N+ + +P + +VD G Sbjct: 230 GKPNVGKSSLLNALIN-ENKAIVTEIPGTTRD----VIEEYINI-DGIP-IKIVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + + + V ++D + + D ++ F+ K Y ++ Sbjct: 282 --RETEDVVEKIG--VEKSKEKIDEADLVIFMLDLSRKIDEEDIEIMDFIKNK--KYIVL 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L K+D + L + + I+ + + +I TS G+ L++ I Sbjct: 336 LNKLD------LNKDLNEENHFIKELDSKY--IIKTSVKNNSGLNELKECI 378 >gi|330817163|ref|YP_004360868.1| GTPase family protein [Burkholderia gladioli BSR3] gi|327369556|gb|AEA60912.1| GTPase family protein [Burkholderia gladioli BSR3] Length = 448 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V DF +N P L+D Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV--DFE--RNGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L T T Sbjct: 292 ALVVGVNKWDGLDAHTRDRT 311 >gi|296084048|emb|CBI24436.3| unnamed protein product [Vitis vinifera] Length = 503 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K TS PG+T+H + D + L D Sbjct: 264 VGFVGYPNVGKSSTINALVGEKRTGVTS-TPGKTKHFQTLIISD---------ELTLCDC 313 Query: 92 PG 93 PG Sbjct: 314 PG 315 >gi|169795097|ref|YP_001712890.1| GTP-binding protein Era [Acinetobacter baumannii AYE] gi|213158241|ref|YP_002320292.1| GTP-binding protein Era [Acinetobacter baumannii AB0057] gi|301345823|ref|ZP_07226564.1| GTP-binding protein Era [Acinetobacter baumannii AB056] gi|301594765|ref|ZP_07239773.1| GTP-binding protein Era [Acinetobacter baumannii AB059] gi|169148024|emb|CAM85887.1| GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase [Acinetobacter baumannii AYE] gi|193078015|gb|ABO12935.2| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase [Acinetobacter baumannii ATCC 17978] gi|213057401|gb|ACJ42303.1| GTP-binding protein Era [Acinetobacter baumannii AB0057] Length = 342 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L +ID H Q D V L Sbjct: 95 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDA-HKWTQNDDLVLEKLKNA 146 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 147 DMPVILVINKADTFGDKREILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEK 202 Query: 209 TINY 212 + Y Sbjct: 203 YLPY 206 >gi|149197591|ref|ZP_01874641.1| hypothetical protein LNTAR_20198 [Lentisphaera araneosa HTCC2155] gi|149139161|gb|EDM27564.1| hypothetical protein LNTAR_20198 [Lentisphaera araneosa HTCC2155] Length = 318 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + +G NVGKSSLIN L NRK ART PG T+ + D M L Sbjct: 131 PIRLMIAGVPNVGKSSLINAL-NRKKSARTGPRPGVTRSQQWITLAD---------DMEL 180 Query: 89 VDMPG 93 +D PG Sbjct: 181 LDTPG 185 >gi|121593586|ref|YP_985482.1| GTP-binding protein EngA [Acidovorax sp. JS42] gi|166224299|sp|A1W581|DER_ACISJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120605666|gb|ABM41406.1| small GTP-binding protein [Acidovorax sp. JS42] Length = 447 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR NVGKS+LIN + + L + PG T+ VP + N L+D Sbjct: 182 LAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDA-ISVP-----FERNGQKFELIDT 234 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D GV D + ++ + + Sbjct: 235 AGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRA 292 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I + K D + Q+ LE++ ++ P + S+ KR+GI L +I++ Sbjct: 293 VVIAVNKWDAVDDYGRQQ-LERSIETCLSFLKFAP-LHFISAKKRQGIGPLWSSIIQA 348 >gi|302039510|ref|YP_003799832.1| GTP-binding protein EngA [Candidatus Nitrospira defluvii] gi|300607574|emb|CBK43907.1| GTP-binding protein EngA [Candidatus Nitrospira defluvii] Length = 464 Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 14/155 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD-FSNLKNNLPAMAL 88 P IA GR NVGKS+L+N ++ + SN PG T+ P D + K+ L Sbjct: 202 PRIAIVGRPNVGKSTLVNSVLGEARVV-VSNVPGTTRD-----PVDSVATFKDR--QYVL 253 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G ++ ++ + + R L LL+D GV + D + + K+ Sbjct: 254 TDTAGIRRRGRVERGIEGYS--VARSLRAIGRSDIAVLLLDAEEGVTEQDTKIAGLVLKQ 311 Query: 149 AVSYQIVLTKID-KLSPTTAQETLEKTKYLIRNYP 182 + +++ K D K A+E ++ L R +P Sbjct: 312 GRACILIVNKWDLKTDDVHAREAYKQD--LERRFP 344 >gi|254490819|ref|ZP_05104002.1| GTP-binding protein Era [Methylophaga thiooxidans DMS010] gi|224463991|gb|EEF80257.1| GTP-binding protein Era [Methylophaga thiooxydans DMS010] Length = 301 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 25/180 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN ++ +K L TS P T+H + N+ VD Sbjct: 11 VAIIGRPNVGKSTLINRILGQK-LCITSRRPQTTRHRILGIK------TNDSGQFIYVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQD--VFSFLDK 147 PG N RY+ + S++ V +++ G+K D+D V L + Sbjct: 64 PGMHSDNKKAMN---------RYMNRAAASSIEDVDVILFVVEGLKWTDEDKRVLKRLQQ 114 Query: 148 KA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +VL K DKL A L + + L + A V+P S+ K ++L + I Sbjct: 115 DARCPVILVLNKADKLDDKAA--LLPQIQELAAQFDFAA--VVPVSARKGMNTDLLEQEI 170 >gi|169632754|ref|YP_001706490.1| GTP-binding protein Era [Acinetobacter baumannii SDF] gi|260556583|ref|ZP_05828801.1| GTP-binding protein Era [Acinetobacter baumannii ATCC 19606] gi|169151546|emb|CAP00313.1| GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase [Acinetobacter baumannii] gi|260409842|gb|EEX03142.1| GTP-binding protein Era [Acinetobacter baumannii ATCC 19606] Length = 342 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L +ID H Q D V L Sbjct: 95 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDA-HKWTQNDDLVLDKLKNA 146 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 147 DMPVILVINKADTFGDKREILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEK 202 Query: 209 TINY 212 + Y Sbjct: 203 YLPY 206 >gi|94676810|ref|YP_588730.1| GTP-binding protein Era [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219960|gb|ABF14119.1| GTP-binding protein Era [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 301 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 16/134 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GRSNVGKS+L+N L+ +K ++ TS P T+H + D ++ + +D Sbjct: 11 VAIVGRSNVGKSTLLNKLLGQK-VSITSRKPQTTRHRILGIKTD------DIYQIIYIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK--QIDQDVFSFLDKKA 149 PG K ++ L+ R S S++ V L+I G+K + D+ V S L + Sbjct: 64 PGLHLRVKNKLSI-----LMNRRAS--SSMNDVDLIIFVVEGIKWTKDDELVLSQLYDRH 116 Query: 150 VSYQIVLTKIDKLS 163 +V+ +IDK++ Sbjct: 117 CRVVLVINQIDKVA 130 >gi|78213545|ref|YP_382324.1| GTP-binding protein EngA [Synechococcus sp. CC9605] gi|123577697|sp|Q3AI13|DER_SYNSC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78198004|gb|ABB35769.1| Small GTP-binding protein domain [Synechococcus sp. CC9605] Length = 455 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 13/137 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + + R +P R + D S ++ N P L Sbjct: 177 PIQMAIIGRPNVGKSSLLNAICGEQ---RAIVSPIRGTTRDTI---DTSIIRENRP-WRL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R+ + +G I R ERS + CV L+ID GV + DQ + ++ Sbjct: 230 VDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLS 163 + + +V+ K D L Sbjct: 286 EDGRACVVVVNKWDALE 302 >gi|24214003|ref|NP_711484.1| GTP-binding protein EngA [Leptospira interrogans serovar Lai str. 56601] gi|73919334|sp|Q8F6K1|DER_LEPIN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|24194868|gb|AAN48502.1| GTP-binding protein EngA [Leptospira interrogans serovar Lai str. 56601] Length = 489 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 23/186 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNL 83 P P ++ GR NVGKS+L N L+ +K LA T + PG T+ L+ + ++ +L Sbjct: 25 PGKKIPVVSIVGRQNVGKSTLFNSLL-KKKLAITEDYPGVTRDVLSARIYQEEKDLD--- 80 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L D PG +N DS I+ Y R + V+LL ++ + D + Sbjct: 81 --FYLCDTPGLDI-----ENPDSLSQTILETAYRQLRESDVIVFLL--DKNLITTADHGL 131 Query: 142 FSFLDKK-AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++L ++ V+ + ++ ++K + LE+ Y EV+P S++ RK + Sbjct: 132 LNYLRREDKVANKPIIYCVNKADKELDEFDLEEF------YRMGLSEVLPISAIGRKNLG 185 Query: 201 VLRKAI 206 +L + I Sbjct: 186 LLLEKI 191 >gi|326390368|ref|ZP_08211927.1| tRNA modification GTPase TrmE [Thermoanaerobacter ethanolicus JW 200] gi|325993645|gb|EGD52078.1| tRNA modification GTPase TrmE [Thermoanaerobacter ethanolicus JW 200] Length = 462 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 24/187 (12%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G++ + G + A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+ Sbjct: 216 ESGMIIREGL-KTAIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNV 269 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K +P + L+D G R + V+ G + + + + ++D + + D Sbjct: 270 K-GIP-IKLIDTAGI---RDTDELVEKIG--VAKSKEVLAEADLILFVLDASRELTKEDY 322 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 ++F L K + + VL KID +E TK I +I S+V++ G+ Sbjct: 323 EIFDILVGKNIVF--VLNKIDLPKKIDEKELKNLTKDGI---------IIEVSTVEKIGL 371 Query: 200 EVLRKAI 206 + L I Sbjct: 372 QELEDTI 378 >gi|300869581|ref|ZP_07114162.1| GTP-binding protein engA [Oscillatoria sp. PCC 6506] gi|300332449|emb|CBN59362.1| GTP-binding protein engA [Oscillatoria sp. PCC 6506] Length = 454 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 13/148 (8%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +P +G LP+ ++A GR NVGKSSL+N + + A S G T+ V Sbjct: 165 LPAVGELPEIEETKVAIVGRPNVGKSSLLNAFLG-ETRAIVSPISGTTRDAIDTV----- 218 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL--IVRYLSERSTLRCVYLLIDCRHGVK 135 ++ N L+D G KKNV+ I R V L+ID GV Sbjct: 219 -VERNGTTYRLIDTAGI----RKKKNVEYGPEFFGINRAFKAIRRADVVLLVIDAVDGVT 273 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 DQ + + ++ + IV+ K D + Sbjct: 274 DQDQKLADRISEEGRACVIVVNKWDAIE 301 >gi|300691971|ref|YP_003752966.1| 30S ribosomal subunit_binding GTPase [Ralstonia solanacearum PSI07] gi|299079031|emb|CBJ51693.1| 30S ribosomal subunit_binding GTPase [Ralstonia solanacearum PSI07] Length = 312 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 28/185 (15%) Query: 25 PKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P++G PE +A GR NVGKS+L+N LV +K ++ TS T+H + Sbjct: 11 PESGAPEGFRCGMVAIVGRPNVGKSTLMNALVGQK-VSITSRKAQTTRH-------RITG 62 Query: 79 LKNNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC-RHGVKQ 136 ++ A VD PG+ A N L S +++ V +++ R+G Sbjct: 63 IQTTDDAQFVFVDTPGFQTRHATALN----RSLNRAVTSTLTSVDAVLFVVEAGRYGPD- 117 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSV 194 D V S L ++ +++ K+D+L T E + +++ P E++P S+ Sbjct: 118 -DAKVLSLLPRE-TPVILIVNKVDRLDAYTRAEMV---AVFLQDMAQVFPFKEIVPMSAK 172 Query: 195 KRKGI 199 R I Sbjct: 173 NRDDI 177 >gi|294776607|ref|ZP_06742076.1| small GTP-binding protein domain protein [Bacteroides vulgatus PC510] gi|294449522|gb|EFG18053.1| small GTP-binding protein domain protein [Bacteroides vulgatus PC510] Length = 396 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I G+ N GKSSLIN L ++ A S+ PG T V K +++ P Sbjct: 7 PAANRLHIVLFGKRNSGKSSLINALTG-QDTALVSDIPGTTTD---AVSKAME-IQHIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I R L ++ R L+ C G + ++ Sbjct: 62 CL-FIDTPGF----------DDEGELGEMRITRTL--KAIERTDIALLLCEDGNCEDEKQ 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L+K+ + ++L K D ++ + T+ I +P +I S+ ++ GIE Sbjct: 109 WMEQLNKRNIPVILILNKAD------IRKDIASTRDCIEKECGQNPLII--SAKEQTGIE 160 Query: 201 VLRKAILETI 210 + +AILE + Sbjct: 161 KILQAILEKL 170 >gi|223985795|ref|ZP_03635838.1| hypothetical protein HOLDEFILI_03144 [Holdemania filiformis DSM 12042] gi|223962243|gb|EEF66712.1| hypothetical protein HOLDEFILI_03144 [Holdemania filiformis DSM 12042] Length = 434 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 16/164 (9%) Query: 21 IGLLPKAGPPEI-----AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 +G P+ PE+ A GR NVGKSSL+N L+ + + S+ G T+ V Sbjct: 160 VGAFPEKQQPELEGIRFAIIGRPNVGKSSLVNALLKEERVI-VSDIEGTTRDA---VDTP 215 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 F +++ +VD G +N++ + ++R +S V +ID G++ Sbjct: 216 F---EHDGKQYVVVDTAGIRKRGKVYENIEKYS--VLRAMSAIERCDVVLFVIDGESGIR 270 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + D+ V + + IV K D + ++T+ + IR Sbjct: 271 EQDKHVAGYAHEAGKPIIIVYNKWDAVEKD--EKTMNRVTEQIR 312 >gi|189189228|ref|XP_001930953.1| nucleolar GTP-binding protein 2 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972559|gb|EDU40058.1| nucleolar GTP-binding protein 2 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 673 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 13 IFLRGVPEIGLLPKAGPPE--IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +FL P+I P P + I G NVGKSS IN L+ K ++ S PG+T+H Sbjct: 349 LFLEHAPDIDTGPNGEPRKTSIGLVGYPNVGKSSTINALIGAKKVS-VSATPGKTKHF 405 >gi|186684424|ref|YP_001867620.1| tRNA modification GTPase TrmE [Nostoc punctiforme PCC 73102] gi|186466876|gb|ACC82677.1| tRNA modification GTPase TrmE [Nostoc punctiforme PCC 73102] Length = 464 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 22/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ + + + +P L D Sbjct: 228 VAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLVVGGIPVQVL-DT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G + R + V L ID G + D++++ + + + Sbjct: 281 AGI---RETTDQVEKIG--VERSRRAANAADLVLLTIDASAGWTEGDREIYEQVQHRPLI 335 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + + K L P + + I T++ + +GI+ L AILE + Sbjct: 336 --LVINKIDLVEE-------RQRKTLQSQIPNPNSK-IATAAAQNQGIDALEVAILEIV 384 >gi|300816620|ref|ZP_07096841.1| small GTP-binding protein [Escherichia coli MS 107-1] gi|300530850|gb|EFK51912.1| small GTP-binding protein [Escherichia coli MS 107-1] Length = 290 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L LSE L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILSE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|183220801|ref|YP_001838797.1| GTP-binding protein EngA [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910901|ref|YP_001962456.1| GTP-binding protein EngA [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775577|gb|ABZ93878.1| GTPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779223|gb|ABZ97521.1| GTP-binding protein EngA [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 450 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 17/180 (9%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P + GR NVGKS+L N ++ R A T N G T+ + + K + +P Sbjct: 3 GLPVVTIVGRQNVGKSTLFNAIL-RAQSAITENTAGVTRDV---LQKTVERAEFKIP-FT 57 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L D PG +N+D I+ E + L + +++ D + + K Sbjct: 58 LSDTPGLDI-----ENIDEISKEIIEIAFEHLRHSDLILHVIDHKDLRKYDYKLIDYFKK 112 Query: 148 KAV-SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + VLT I+K+ + LE Y E++P S++ R+ ++L + I Sbjct: 113 DEILKEKNVLTLINKVDTEQDEYDLEPF------YTLGLNELLPISALGRRNFDLLYQKI 166 >gi|149923268|ref|ZP_01911678.1| GTP-binding protein EngA [Plesiocystis pacifica SIR-1] gi|149815865|gb|EDM75385.1| GTP-binding protein EngA [Plesiocystis pacifica SIR-1] Length = 487 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 17/161 (10%) Query: 29 PP--EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 PP IAF GR N GKS+L+N L+ + + S+ PG T+ ++P + + + Sbjct: 200 PPGTRIAFIGRPNAGKSTLVNTLLEEQRVI-VSDTPGTTRD-PVYLPFRYKDRD-----L 252 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L D G + + ++ + ER+ + V L+ID GV DQ + Sbjct: 253 VLTDTAGLRRRKQIARAMEKLAAIKSIRTMERT--QVVVLVIDASQGVTDQDQRLARMAF 310 Query: 147 KKAVSYQIVLTKID------KLSPTTAQETLEKTKYLIRNY 181 ++ + L K D KL+ T T E +L Y Sbjct: 311 ERGKGVVVALHKWDLIRRDGKLAKDTLAYTQEALGFLENPY 351 >gi|153951852|ref|YP_001398571.1| GTP-binding protein EngA [Campylobacter jejuni subsp. doylei 269.97] gi|166224323|sp|A7H4Z1|DER_CAMJD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|152939298|gb|ABS44039.1| GTPase family protein [Campylobacter jejuni subsp. doylei 269.97] Length = 460 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 198 VGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESIVHKD--------KVIEFVD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + + K + Sbjct: 250 TAGI-RKRGKIQGLERFA--LNRTEKILSHSQIALLVLDTHEGFNELDERIAGLVVKHYL 306 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK T + L++ K+L A+ VI S++ K + VL I Sbjct: 307 GVIIVLNKWDKSEMDFDKTVKELRLDRFKFL------AYAPVISVSALSGKRVHVLLDKI 360 Query: 207 LE 208 L+ Sbjct: 361 LQ 362 >gi|323137543|ref|ZP_08072620.1| GTP-binding protein Era [Methylocystis sp. ATCC 49242] gi|322397169|gb|EFX99693.1| GTP-binding protein Era [Methylocystis sp. ATCC 49242] Length = 307 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 14/132 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA-MALVDM 91 A G N GKS+L+N LV A+ S + Q V + + PA + LVD Sbjct: 17 ALVGAPNAGKSTLLNQLVG----AKVSIVSRKAQTTRALV----RGIAIDGPAQIILVDT 68 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK+ +D ++ LS + V LL+D R G+ + + + + L + Sbjct: 69 PGI---FKPKRRLDR--AMVASALSGATDADVVALLVDARRGLDEEVESILTQLAEVKAP 123 Query: 152 YQIVLTKIDKLS 163 +VL KID ++ Sbjct: 124 KILVLNKIDVIA 135 >gi|332851054|ref|ZP_08433163.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013150] gi|332869697|ref|ZP_08438885.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013113] gi|332730218|gb|EGJ61543.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013150] gi|332732599|gb|EGJ63832.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013113] Length = 340 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 40 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 92 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L +ID H Q D V L Sbjct: 93 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDA-HKWTQNDDLVLEKLKNA 144 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 145 DMPVILVINKADTFGDKREILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEK 200 Query: 209 TINY 212 + Y Sbjct: 201 YLPY 204 >gi|187935025|ref|YP_001885401.1| GTP-binding protein EngA [Clostridium botulinum B str. Eklund 17B] gi|238691598|sp|B2THQ9|DER_CLOBB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|187723178|gb|ACD24399.1| ribosome-associated GTPase EngA [Clostridium botulinum B str. Eklund 17B] Length = 438 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 11/144 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSLIN L+ + L S+ G T+ S L+ L+D Sbjct: 179 IAMIGKPNVGKSSLINKLLGEERLI-VSDVAGTTRDAI------DSYLETEQGKFILIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + +I Y S C+ L+ID + GV + D+ + + + + Sbjct: 232 AGLRRKSKVKEEIERY-SVIRTYASIEKADVCI-LMIDAQDGVTEQDEKIIGYAHELNKA 289 Query: 152 YQIVLTKIDKLSPTTAQETLEKTK 175 +++ K D + +T+EK K Sbjct: 290 IIVLVNKWDLVEKD--DKTMEKFK 311 >gi|312796097|ref|YP_004029019.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454] gi|312167872|emb|CBW74875.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454] Length = 444 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + + PG T+ + DF + P L+D Sbjct: 180 KIAIVGRPNVGKSTLVNALLGEERVI-AFDLPGTTRDSIYI---DFE--RQGRP-YTLID 232 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + +V+ L + V LL+D R + + D + F+ ++ Sbjct: 233 TAGLRKRGKVFEAVEKFS--VVKTLQSIADANVVILLLDARQDISEQDAHIAGFVVEQGR 290 Query: 151 SYQIVLTKIDKLSPTTAQET----LEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + T K K+L ++ +H S+ ++ GI L +++ Sbjct: 291 ALVIGVNKWDGLDEHVRERTKADLARKLKFL--DFAKSH----YISAAEKTGIGALLRSV 344 >gi|229106078|ref|ZP_04236691.1| tRNA modification GTPase mnmE [Bacillus cereus Rock3-28] gi|228677344|gb|EEL31608.1| tRNA modification GTPase mnmE [Bacillus cereus Rock3-28] Length = 326 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 92 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 144 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+++F + K + Sbjct: 145 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEELFRAVQGK--DF 197 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P +E+ L A VI TS ++ +GI+ L KAI Sbjct: 198 IVIVNKTD--LPQVID--MERVTEL-----AAGNRVITTSLIEEQGIDELEKAI 242 >gi|332992354|gb|AEF02409.1| GTPase Era [Alteromonas sp. SN2] Length = 303 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 28/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N L+ +K ++ TS P T+H L D+ + V Sbjct: 13 VAIVGRPNVGKSTLLNRLLGQK-VSITSRKPQTTRHRILGIDTEGDYQAI--------YV 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQD--VFSFL 145 D PG N RY+ + S+L V L++ G + D D V S + Sbjct: 64 DTPGLHSEEKSAMN---------RYMNRAASSSLAEVGLVLFVIEGTRWNDDDEMVLSKV 114 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +++ K+DK+ A + + L Y H +IP S+ + K ++ +R+ Sbjct: 115 KASGLPCYLIVNKMDKVDDKEA--FMVHLQGLSEKYKFEH--IIPISAKQGKMVDDIREL 170 Query: 206 ILETI 210 + +++ Sbjct: 171 VAKSL 175 >gi|288555745|ref|YP_003427680.1| Era/ThdF family GTP-binding protein [Bacillus pseudofirmus OF4] gi|288546905|gb|ADC50788.1| Era/ThdF family GTP-binding protein [Bacillus pseudofirmus OF4] Length = 303 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 27/182 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ +K +A S+ P T++ K +N + +D Sbjct: 13 VSIIGRPNVGKSTLLNYVIGQK-IAIMSDKPQTTRN------KIQGVYTSNESQVVFIDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL---IDCRHGVKQIDQDVFSFLDKK 148 PG PK + G +++ ++TLR V L+ +D ++ + L + Sbjct: 66 PG---IHKPKHKL---GDFMMKVA--QNTLREVDLILYVVDAGEAFGSGEEFIIERLKET 117 Query: 149 AVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KIDK+ P +E +TK+ EVIP S+++ + L + I Sbjct: 118 KTPVFLVINKIDKVQPDDLLGIIETYRTKF-------DFTEVIPVSALQGSNVPTLMEQI 170 Query: 207 LE 208 ++ Sbjct: 171 VD 172 >gi|312881717|ref|ZP_07741494.1| GTP-binding protein Era [Vibrio caribbenthicus ATCC BAA-2122] gi|309370607|gb|EFP98082.1| GTP-binding protein Era [Vibrio caribbenthicus ATCC BAA-2122] Length = 325 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKS+L+N ++ +K ++ TS P T+H + DF + V Sbjct: 34 IAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGVDTQGDFQAI--------YV 84 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG N L+ R S S + V+ L+D H D+ V + L K Sbjct: 85 DTPGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTDD-DEMVLTKLQKS 138 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D + P Q + + + +V+P S+ K I+VLR+ + Sbjct: 139 NFPVVLCVNKVDNV-PDRNQVMMH---MMDMSKKMEFVDVVPISAKHGKNIDVLREHV 192 >gi|237745515|ref|ZP_04575995.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS] gi|229376866|gb|EEO26957.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS] Length = 445 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 9/150 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G+ + P +A GR NVGKS++IN L+ + + + PG T+ +P Sbjct: 171 EDGIAGEQRPVRLAVVGRPNVGKSTMINALLGEERVI-AFDLPGTTRD-AIEIP-----F 223 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + + LVD G + ++ + +V+ L S V LL+D + + + D Sbjct: 224 ERDGKHYTLVDTAGLRKRGKVFQAIEKFS--VVKTLQAISEANVVLLLLDAQQDISEQDA 281 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 + F+ + + + + K D L P +E Sbjct: 282 HIAGFVLESGRALVVGINKWDGLPPDKRRE 311 >gi|73749080|ref|YP_308319.1| GTP-binding protein EngA [Dehalococcoides sp. CBDB1] gi|73660796|emb|CAI83403.1| GTP-binding protein EngA [Dehalococcoides sp. CBDB1] Length = 442 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 14/141 (9%) Query: 25 PKAGPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 P A P E +A GR+NVGKS+L+N + + + SN PG T+ P DF Sbjct: 171 PIATPEEDTSVKLALVGRTNVGKSTLLNTFLGEER-SIVSNIPGTTRD-AIDTPLDFDGT 228 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + L+D G + V+ + ++R L V L++D V D Sbjct: 229 N-----VLLIDTAGIRRRGKVESGVEKYS--VLRALKAIDRADVVLLVMDTEELVTAQDT 281 Query: 140 DVFSFLDKKAVSYQIVLTKID 160 + ++ A I+L K D Sbjct: 282 HIAGYVRDTAKGIIIILNKWD 302 Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P IA GR NVGKS+L+N L + KNLA T + PG T+ F Sbjct: 7 PIIAIVGRQNVGKSTLLNRLAH-KNLAITEDLPGTTRDRLF 46 >gi|312143875|ref|YP_003995321.1| ribosome-associated GTPase EngA [Halanaerobium sp. 'sapolanicus'] gi|311904526|gb|ADQ14967.1| ribosome-associated GTPase EngA [Halanaerobium sp. 'sapolanicus'] Length = 438 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 11/130 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IA G+ NVGKSSLIN LV +N S+ PG T+ ++ + ++ ++K N +D Sbjct: 180 IAVIGKPNVGKSSLINHLVG-ENRVIVSDMPGTTRDAVDTLI--EWKDIKFN-----FID 231 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K++++ + L R L V ++ID GV D+ + + + Sbjct: 232 TAGLRRKSRVKESIEYYSNL--RALKSVDRSDAVLMMIDATKGVSDQDKKIAGYAHDEGK 289 Query: 151 SYQIVLTKID 160 + I + K D Sbjct: 290 AMVIAINKWD 299 >gi|225462438|ref|XP_002264570.1| PREDICTED: similar to GTP-binding family protein [Vitis vinifera] Length = 597 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K TS PG+T+H + D + L D Sbjct: 318 VGFVGYPNVGKSSTINALVGEKRTGVTS-TPGKTKHFQTLIISD---------ELTLCDC 367 Query: 92 PG 93 PG Sbjct: 368 PG 369 >gi|313242005|emb|CBY34189.1| unnamed protein product [Oikopleura dioica] Length = 761 Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 21/102 (20%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ F G +NVGKSS++N LV K+ + S PG T+ L + N + LVD Sbjct: 313 KVGFVGHTNVGKSSIMNALVGEKHFS-MSIRPGHTKELQTW---------NVSEHVQLVD 362 Query: 91 MPGYGYARAPKKNVDSWGGL-----------IVRYLSERSTL 121 PG + + + GL ++ YL+ER L Sbjct: 363 SPGIIFPSTVSRQLQILSGLFPVDQVREPYSVIGYLAERVNL 404 >gi|255021269|ref|ZP_05293318.1| GTP-binding protein EngA [Acidithiobacillus caldus ATCC 51756] gi|254969280|gb|EET26793.1| GTP-binding protein EngA [Acidithiobacillus caldus ATCC 51756] Length = 447 Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust. Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 11/129 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N L R A ++ PG T+ ++ V + + ++D Sbjct: 5 IALVGRPNVGKSTLFNRL-TRSREALVADLPGLTRDRHYGVAQ------HGTQRFLVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ P++ + + + V L+D + G+ D+++ + L + + Sbjct: 58 GGF----EPEEREGLVAAMAAQTRQAIAEADAVCFLVDAKEGLSAQDEEIAAELRRSGKT 113 Query: 152 YQIVLTKID 160 +V+ K+D Sbjct: 114 VYLVVNKMD 122 >gi|154508812|ref|ZP_02044454.1| hypothetical protein ACTODO_01321 [Actinomyces odontolyticus ATCC 17982] gi|153798446|gb|EDN80866.1| hypothetical protein ACTODO_01321 [Actinomyces odontolyticus ATCC 17982] Length = 517 Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 39/193 (20%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG----RTQHLNFFVPKDFSNLKNN 82 AG P +A GR NVGKS+L+N ++ R+ A + PG R + + +DF+ Sbjct: 79 AGLPVLAVVGRPNVGKSTLVNRILGRRE-AVVQDTPGVTRDRVSYPAEWAGRDFT----- 132 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQI 137 LVD G+ +D G + R ++E++ + V L++D GV Sbjct: 133 -----LVDTGGW--------EIDVKG--LDRSVAEQAEIAVDLADAVVLVLDATVGVTAS 177 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + L K + K+D SP QE YL + E P S++ + Sbjct: 178 DERIVEMLRAKKKPIILAANKVD--SPL--QEA--DAAYL---WSLGLGEPHPISALHGR 228 Query: 198 GIEVLRKAILETI 210 G L +LE + Sbjct: 229 GTGDLLDVVLEVL 241 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 16/28 (57%), Positives = 18/28 (64%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVN 51 LP GP +A GR NVGKSSL+N L Sbjct: 251 LPSGGPRRVALVGRPNVGKSSLLNALAG 278 >gi|147669843|ref|YP_001214661.1| GTP-binding protein EngA [Dehalococcoides sp. BAV1] gi|146270791|gb|ABQ17783.1| small GTP-binding protein [Dehalococcoides sp. BAV1] Length = 442 Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 14/141 (9%) Query: 25 PKAGPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 P A P E +A GR+NVGKS+L+N + ++ + SN PG T+ P DF Sbjct: 171 PIATPEEDTSVKLALVGRTNVGKSTLLNTFLG-EDRSIVSNIPGTTRDA-IDTPLDFDGT 228 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + L+D G + V+ + ++R L V L++D V D Sbjct: 229 N-----VLLIDTAGIRRRGKVESGVEKYS--VLRALKAIDRADVVLLVMDTEELVTAQDT 281 Query: 140 DVFSFLDKKAVSYQIVLTKID 160 + ++ A I+L K D Sbjct: 282 HIAGYVRDTAKGIIIILNKWD 302 Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P IA GR NVGKS+L+N L + KNLA T + PG T+ F Sbjct: 7 PIIAIVGRQNVGKSTLLNRLAH-KNLAITEDLPGTTRDRLF 46 >gi|71004100|ref|XP_756716.1| hypothetical protein UM00569.1 [Ustilago maydis 521] gi|46095985|gb|EAK81218.1| hypothetical protein UM00569.1 [Ustilago maydis 521] Length = 818 Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 7/66 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 I G+ NVGKSSL+N L K + R S PG+T+H +F VP + ++ P A Sbjct: 505 IGLIGQPNVGKSSLLNALFGSK-VVRASKTPGKTKHFQTHFLVP--LRSSSSSTPVQA-- 559 Query: 90 DMPGYG 95 D P G Sbjct: 560 DQPKAG 565 >gi|258511668|ref|YP_003185102.1| ribosome-associated GTPase EngA [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478394|gb|ACV58713.1| ribosome-associated GTPase EngA [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 444 Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N LV R+ ++ + PG T+ + + + N ++ Sbjct: 4 PVVAIVGRANVGKSTLFNRLVGRR-VSIVEDTPGVTRD------RIYGKSEWNGVPFRVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLI-VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G D G LI V+ + ++D R GV Q D+ V L + Sbjct: 57 DTGGI-----EMDEEDEMGNLIRVQAQIAIDEADVILFVVDGRQGVTQADEHVAQVLRR- 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ V+ ++KL + +E+ Y E IP S+ +G L A++ Sbjct: 111 --AHKPVVLGVNKL------DHVEQHALSYEFYRLGFGEPIPFSAEHGQGTGDLLDAVVA 162 Query: 209 TI 210 + Sbjct: 163 AL 164 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 18/164 (10%) Query: 21 IGLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LPKA + IAF GR NVGKSSL+N L+ + + + A ++ Sbjct: 161 VAALPKASEEDEDEDAIRIAFIGRPNVGKSSLVNRLLGEERVMVSPVAGTTRDAVD---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L+ + LVD G + ++ + ++R L ++++D + G Sbjct: 217 ---TPLERDGQTYMLVDTAGMRRKGKVYERIEKYS--VLRALRALDRADVAFVVLDAQTG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT--TAQETLEKTK 175 + + D+ V + + V+ K D + TA EK + Sbjct: 272 IVEQDKRVAGYALDAGCAIAFVVNKWDAIEKDDKTAHRFEEKIR 315 >gi|168186800|ref|ZP_02621435.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund] gi|169295122|gb|EDS77255.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund] Length = 438 Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L ++ +A + PG T+ + ++ L NN Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAGKR-IAIVDDMPGVTRD-RIYAEAEW--LNNNF---T 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 ++D G P+ + +IV + ++ L V ++D + G+ D++V Sbjct: 55 IIDTGGI----EPEND-----DIIVAQMRRQAQLAIEMADVVLFIVDGKQGLTDADREVA 105 Query: 143 SFLDKKAVSYQIVLTKIDK 161 L K S + + KID+ Sbjct: 106 HMLRKANKSIVLAVNKIDR 124 Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 11/130 (8%) Query: 32 IAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 IA GR NVGKSSLIN IL K++ SN PG T+ S ++ L+D Sbjct: 179 IAMIGRPNVGKSSLINRILGEEKHI--VSNIPGTTRDAV------DSYIETEEGKFVLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ V+ + VR L+ L+ID + + D+ + + + Sbjct: 231 TAGLRRKSKIKEQVERYSA--VRTLASIENADVCILMIDATEDIAEQDERIIGYAHEINK 288 Query: 151 SYQIVLTKID 160 + +++ K D Sbjct: 289 AIVVIVNKWD 298 >gi|325524779|gb|EGD02753.1| GTP-binding protein Der [Burkholderia sp. TJI49] Length = 445 Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQ----ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGLDEHARERAKADLTRKLKFL--DFAKSH----FISAAKKTGIGALMRSV 345 >gi|238752471|ref|ZP_04613947.1| GTP-binding protein engA [Yersinia rohdei ATCC 43380] gi|238709320|gb|EEQ01562.1| GTP-binding protein engA [Yersinia rohdei ATCC 43380] Length = 494 Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + ++ A ++ PG T+ + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G+ + +D + ++ +S L V ++D R G+ DQ + Sbjct: 46 EVEGHEFIVIDTGGIDGTEDGVETKMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P TA Sbjct: 106 LRSREKATFLVANKTDGIDPDTA 128 >gi|197294186|ref|YP_001798727.1| tRNA modification GTPase TrmE [Candidatus Phytoplasma australiense] gi|171853513|emb|CAM11355.1| tRNA modification GTPase [Candidatus Phytoplasma australiense] Length = 453 Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 31/175 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA--LVDMPG 93 GR NVGKSSL+N L+N A S+ G T +DF + N + L+D G Sbjct: 226 GRPNVGKSSLLNALLNEPK-AIVSDIAGTT--------RDFVDASFNCQGITLNLIDTAG 276 Query: 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 P ++ G I R S+ + L++D +K+ D+ + K Sbjct: 277 IHQTTNP---IEKIG--ISRTKKILSSAELILLVLDQSEPLKEDDEKLLELTRLKP--RI 329 Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 I+ K D + T T + I+N+ I SS+K+ G++ L+KAIL+ Sbjct: 330 IIGNKADLSNEKTV------TSFPIKNF-------ISISSLKKTGLDELQKAILQ 371 >gi|123441422|ref|YP_001005409.1| GTP-binding protein EngA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166225934|sp|A1JKS6|DER_YERE8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|122088383|emb|CAL11174.1| putative GTP-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 494 Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + ++ A ++ PG T+ + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G+ + +D + ++ +S L V ++D R G+ DQ + Sbjct: 46 EVEGHEFIVIDTGGIDGTEDGVETKMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P TA Sbjct: 106 LRSREKATFLVANKTDGIDPDTA 128 >gi|266624277|ref|ZP_06117212.1| GTP-binding protein EngA [Clostridium hathewayi DSM 13479] gi|288863885|gb|EFC96183.1| GTP-binding protein EngA [Clostridium hathewayi DSM 13479] Length = 189 Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 30/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + D + L N L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAG-DTISIVKDTPGVTRDRIY---ADCTWLDKNF---TLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-----STLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P + +I+ + E+ +T + ++D R G+ D V Sbjct: 57 DTGGI----EPDSS-----DIILSQMREQAEIAIATADVIVFIVDVRQGLVDADSKVADM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K + + K+D E Y N P +P S+ R G+ E+L Sbjct: 108 LRKSKKPVVLAVNKVDSF------EKFGNDVYEFYNLGIGDP--VPVSAASRLGLGELLD 159 Query: 204 KAI 206 + I Sbjct: 160 EVI 162 >gi|149002004|ref|ZP_01826958.1| GTP-binding protein EngA [Streptococcus pneumoniae SP14-BS69] gi|147759813|gb|EDK66803.1| GTP-binding protein EngA [Streptococcus pneumoniae SP14-BS69] Length = 353 Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 19/158 (12%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 86 EENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDGQ- 140 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G + +N + + + +RS + V ++I+ G+++ D+ + Sbjct: 141 -EFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVINAEEGIREYDKRIAG 197 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++N+ Sbjct: 198 FAHEAGKGMIIVVNKWD---------TLEKDNHTMKNW 226 >gi|238794826|ref|ZP_04638427.1| GTP-binding protein engA [Yersinia intermedia ATCC 29909] gi|238725839|gb|EEQ17392.1| GTP-binding protein engA [Yersinia intermedia ATCC 29909] Length = 495 Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + ++ A ++ PG T+ + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G+ + +D + ++ +S L V ++D R G+ DQ + Sbjct: 46 EVEGHEFIVIDTGGIDGTEDGVETKMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P TA Sbjct: 106 LRSREKATFLVANKTDGIDPDTA 128 >gi|57505514|ref|ZP_00371441.1| GTP-binding protein, Era/ThdF family [Campylobacter upsaliensis RM3195] gi|57016061|gb|EAL52848.1| GTP-binding protein, Era/ThdF family [Campylobacter upsaliensis RM3195] Length = 457 Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 22/184 (11%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP-KDFSNLKNNLPAMALV 89 +I GR NVGKSSL+N LV + +S A +N V KD + + Sbjct: 198 KIGIVGRVNVGKSSLLNALVKEQRSVVSSIAGTTIDPVNESVMYKD--------KVLEFI 249 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R + ++ + + + S + L++D G ++D+ + + K Sbjct: 250 DTAGI-RKRGKIQGIERFALNRTEKMLQNS--QIALLVLDANEGFNELDERIAGLISKHY 306 Query: 150 VSYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + IVL K DK + L++ K+L +H +I S++ K + ++ Sbjct: 307 LGVIIVLNKWDKTRYEFDKVVKELRLDRFKFL------SHAPIISVSALSGKRVHIVMDK 360 Query: 206 ILET 209 ILE Sbjct: 361 ILEV 364 >gi|288801362|ref|ZP_06406816.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 299 str. F0039] gi|288331745|gb|EFC70229.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 299 str. F0039] Length = 437 Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust. Identities = 42/182 (23%), Positives = 72/182 (39%), Gaps = 15/182 (8%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNR-KNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 G P A GR N GKSS+IN + +N+ R F F Sbjct: 174 GIPRFAVVGRPNAGKSSIINAFMGEDRNIVTEIAGTTRDSIYTRFDKFGFD--------F 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G ++++ + ++R + L+ID G++ D ++F + Sbjct: 226 YLVDTAGIRRKNKVTEDLEFYS--VMRSIRAIENSDVCILMIDATRGIETQDMNIFQLIQ 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSVKRKGIEVLR 203 + S +V+ K D L P Q+ + + IR T P + ++ K++ +VL Sbjct: 284 RNNKSLVVVVNKWD-LVPDKDQKVITTFETAIRKRMAPFTDFPIIFASALTKQRIFKVLE 342 Query: 204 KA 205 A Sbjct: 343 TA 344 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 17/133 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A S+ G T+ + + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRS-AIVSDTAGTTRD------RQYGKVDWNGREFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL---SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G+ + D + I R + +E + L V ++D + G+ D+DV L K Sbjct: 58 GGWVV-----NSEDIFEDAIRRQVLIATEEANL--VLFVVDVQTGLTDWDEDVAQILRKS 110 Query: 149 AVSYQIVLTKIDK 161 V +V+ K+DK Sbjct: 111 KVPIILVVNKVDK 123 >gi|23099406|ref|NP_692872.1| GTP-binding protein [Oceanobacillus iheyensis HTE831] gi|81746143|sp|Q8EPY0|ERA_OCEIH RecName: Full=GTPase Era gi|22777635|dbj|BAC13907.1| GTP-binding protein (Era/TrmE family) [Oceanobacillus iheyensis HTE831] Length = 300 Score = 39.3 bits (90), Expect = 0.39, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 19/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+ +N ++ +K +A S+ T++ K N M +D Sbjct: 10 LSIIGRPNVGKSTFMNKVIGQK-IAIMSDKAQTTRN------KIQGVFTTNDAQMIFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ + + + + +I+ G + DQ + L K Sbjct: 63 PG---IHKPKHRL---GDFMVQIAEDTLNEVDSILFMINADEGYGRGDQYIIDLLQKVNS 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ KID + P +EK K L E+IP S+++ ++ L + E + Sbjct: 117 PVFLIINKIDLIHPDQLLPLIEKYKSL-----YDFEEIIPISALEGNNVDHLVDVLKEHL 171 >gi|221198076|ref|ZP_03571122.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2M] gi|221204366|ref|ZP_03577383.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2] gi|221212773|ref|ZP_03585749.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD1] gi|221166986|gb|EED99456.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD1] gi|221175223|gb|EEE07653.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2] gi|221182008|gb|EEE14409.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2M] Length = 445 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQ----ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGLDEHARERAKADLTRKLKFL--DFAKSH----FISAAKKTGIGALMRSV 345 >gi|167538288|ref|XP_001750809.1| hypothetical protein [Monosiga brevicollis MX1] gi|163770726|gb|EDQ84408.1| predicted protein [Monosiga brevicollis MX1] Length = 708 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 11/64 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G NVGKSS IN + K ++ S PG+T+H + LP M L Sbjct: 453 PVIGLVGYPNVGKSSTINAICRSKRVS-VSATPGKTKHFQTIL----------LPEMTLC 501 Query: 90 DMPG 93 D PG Sbjct: 502 DCPG 505 >gi|238797968|ref|ZP_04641458.1| GTP-binding protein engA [Yersinia mollaretii ATCC 43969] gi|238718173|gb|EEQ09999.1| GTP-binding protein engA [Yersinia mollaretii ATCC 43969] Length = 495 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + ++ A ++ PG T+ + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G+ + +D + ++ +S L V ++D R G+ DQ + Sbjct: 46 EVEGHEFIVIDTGGIDGTEDGVETKMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P TA Sbjct: 106 LRSREKATFLVANKTDGIDPDTA 128 >gi|238785325|ref|ZP_04629314.1| GTP-binding protein engA [Yersinia bercovieri ATCC 43970] gi|238713778|gb|EEQ05801.1| GTP-binding protein engA [Yersinia bercovieri ATCC 43970] Length = 494 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + ++ A ++ PG T+ + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G+ + +D + ++ +S L V ++D R G+ DQ + Sbjct: 46 EVEGHEFIVIDTGGIDGTEDGVETKMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P TA Sbjct: 106 LRSREKATFLVANKTDGIDPDTA 128 >gi|291618407|ref|YP_003521149.1| EngA [Pantoea ananatis LMG 20103] gi|291153437|gb|ADD78021.1| EngA [Pantoea ananatis LMG 20103] gi|327394799|dbj|BAK12221.1| GTP-binding protein EngA [Pantoea ananatis AJ13355] Length = 494 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ DQ + Sbjct: 46 EVEGREFIVIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D L P A Sbjct: 106 LRSRQKATFLVANKTDGLDPDQA 128 >gi|218290942|ref|ZP_03494999.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1] gi|218239107|gb|EED06310.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1] Length = 442 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N LV R+ ++ + PG T+ + + + N ++ Sbjct: 4 PVVAIVGRANVGKSTLFNRLVGRR-VSIVEDTPGVTRD------RIYGKSEWNGVPFRVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLI-VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G D G LI V+ + ++D R GV Q D+ V L + Sbjct: 57 DTGGI-----EMDEEDEIGNLIRVQAQIAIDEADVILFVVDGRQGVTQADEHVAQVLRR- 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ V+ ++KL + +E+ Y E IP S+ +G L A++ Sbjct: 111 --AHKPVVLGVNKL------DHVEQHALSYEFYRLGFGEPIPFSAEHGRGTGDLLDAVVA 162 Query: 209 TI 210 + Sbjct: 163 AL 164 >gi|297585588|ref|YP_003701368.1| tRNA modification GTPase TrmE [Bacillus selenitireducens MLS10] gi|297144045|gb|ADI00803.1| tRNA modification GTPase TrmE [Bacillus selenitireducens MLS10] Length = 458 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 47/183 (25%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG-- 93 GR NVGKSSL+N LV+ +N A + PG T+ V +++ N++ +P + L+D G Sbjct: 227 GRPNVGKSSLLNSLVH-ENKAIVTEIPGTTRD----VIEEYVNIR-GVP-LKLLDTAGIR 279 Query: 94 --------YGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQIDQDVFS 143 G R+ + +D+ L V +E + R ++ L+ DQD Sbjct: 280 ETEDVVERLGVERSRQVMIDAELILFVVNYNEPLTDSDRELFELVK--------DQDTIV 331 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++K+ + QI + ++++L+ HP V+ TS +K +G++ L Sbjct: 332 IVNKRDLDGQIDMKEVNQLAG-------------------QHP-VVTTSLLKDEGVDELE 371 Query: 204 KAI 206 +AI Sbjct: 372 EAI 374 >gi|290968112|ref|ZP_06559657.1| small GTP-binding protein domain protein [Megasphaera genomosp. type_1 str. 28L] gi|290781787|gb|EFD94370.1| small GTP-binding protein domain protein [Megasphaera genomosp. type_1 str. 28L] Length = 400 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 36/177 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G N GKSSL+N V ++L+ S+ G T V K L L + ++D Sbjct: 14 IGFFGYRNAGKSSLVNA-VTGQDLSIVSDTEGTTTD---PVSKAMELLP--LGPVLIIDT 67 Query: 92 PGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 PG +D G L + R + L+ D G++ +D +V + + Sbjct: 68 PG----------LDDTGTLGEKRVARTRRVLNKTDIAVLVADAAAGLRPLDMEVLQLIQQ 117 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 K + Y IV K D ++ N P A + S++K++GI L++ Sbjct: 118 KGLPYLIVYNKRD----------------MLENVPPAGEHEMYVSALKKQGIYELKE 158 >gi|152984162|ref|YP_001350090.1| GTP-binding protein Era [Pseudomonas aeruginosa PA7] gi|150959320|gb|ABR81345.1| GTP-binding protein Era [Pseudomonas aeruginosa PA7] Length = 302 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 14 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGEVQAVYVD 65 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 P G ++ +K ++ + + R S V + + R + DQ V + + Sbjct: 66 TP--GLHKSGEKALNRY---MNRTASAALKDVDVVIFVVDRSRWTEEDQMVLERVQYVSC 120 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I + K D++ + L ++L + P A EV+P S+ +EVL K + E + Sbjct: 121 PVLIAVNKTDRIEEKA--DLLPHLEWLTQQLPKA--EVVPISAQNGTNLEVLEKLVAERL 176 >gi|89901081|ref|YP_523552.1| GTP-binding protein EngA [Rhodoferax ferrireducens T118] gi|122479081|sp|Q21W32|DER_RHOFD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|89345818|gb|ABD70021.1| Small GTP-binding protein domain [Rhodoferax ferrireducens T118] Length = 447 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 17/185 (9%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G ++A +GR NVGKS+LIN + + L + PG T+ VP + N Sbjct: 178 GIIKLAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRD-AISVP-----FERNGQKFE 230 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD G + ++ + +V+ L + V LLID GV D + ++ + Sbjct: 231 LVDTAGLRRRGKVFEAIEKFS--VVKTLQAIESSNVVLLLIDATQGVTDQDAHIAGYILE 288 Query: 148 KAVSYQIVLTK---IDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + I + K +D+ + ++E T+ + T H S+ KR+G+ L Sbjct: 289 NGRAVVIAVNKWDAVDEYQRELVKRSIE-TRLPFLKFATMH----LISATKRQGLGPLWA 343 Query: 205 AILET 209 +I + Sbjct: 344 SIAQA 348 >gi|187778474|ref|ZP_02994947.1| hypothetical protein CLOSPO_02068 [Clostridium sporogenes ATCC 15579] gi|226950371|ref|YP_002805462.1| GTP-binding protein Era [Clostridium botulinum A2 str. Kyoto] gi|254783292|sp|C1FVS6|ERA_CLOBJ RecName: Full=GTPase Era gi|187772099|gb|EDU35901.1| hypothetical protein CLOSPO_02068 [Clostridium sporogenes ATCC 15579] gi|226842790|gb|ACO85456.1| GTP-binding protein Era [Clostridium botulinum A2 str. Kyoto] Length = 296 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 + GR NVGKS+L+N ++ K L+ S P T+ ++ + +D L VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTEDNYQL-------VFVD 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG PK + G +V+ S+ + V LI+ + D + L + Sbjct: 59 TPG---IHKPKHKL---GEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +VL KID+ ETL+ L+ E+IP S++K K +++L++ + + Sbjct: 113 VPVFLVLNKIDENPQEKVAETLKTYSELME-----FQEIIPISALKGKNVDLLKELMFKY 167 Query: 210 I 210 I Sbjct: 168 I 168 >gi|85000519|ref|XP_954978.1| ORF1-related protein [Theileria annulata strain Ankara] gi|65303124|emb|CAI75502.1| ORF1-related protein, putative [Theileria annulata] Length = 651 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 31/190 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLART------SNAPGRT---QHLNFFVPKDFSNLKNN 82 ++ GRSNVGKSSL N ++ + A S PG T + F+ LK N Sbjct: 3 VSLIGRSNVGKSSLFNSILAQAGKASNILKSIVSEKPGTTRNSKQAQFY-------LKGN 55 Query: 83 LPAMALVDMPGYG--YARAPKKNVDSWGGLIVRYLS---ERSTLRCVYLLIDCRHGVKQI 137 + LVD G+ + PK+ S +I + E S L ++ ++D GV Q+ Sbjct: 56 --KITLVDTGGFEAFLTKTPKREDSSIFKIIEKETHKAVESSNL--IFFVLDGNEGVTQL 111 Query: 138 D----QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 D + + +++D+ + ++ L I+KL ++E E + L Y E + S Sbjct: 112 DIHLAEKLKNWVDQAHIKPEVKLV-INKLENKGSEEYYEVLSDCLSDCYTLYMGEPLFVS 170 Query: 193 SVKRKGIEVL 202 + +R GIE L Sbjct: 171 AQERTGIEKL 180 >gi|222823547|ref|YP_002575121.1| predicted GTP-binding protein [Campylobacter lari RM2100] gi|254783143|sp|B9KFN5|DER_CAMLR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|222538769|gb|ACM63870.1| conserved hypothetical protein, predicted GTP-binding protein [Campylobacter lari RM2100] Length = 461 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 12/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N LV ++ + S+ G T P + S + + + VD Sbjct: 198 KVGIIGRVNVGKSSLLNALV-KEERSVVSDIAGTT-----IDPVNESIMHKD-KIIEFVD 250 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R + + L++D G ++D+ + K + Sbjct: 251 TAGI-RKRGKIQGLERYA--LNRTEYALTNAQIALLVLDAAEGFNELDERIAGLAAKHCL 307 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 IVL K DK S +TL++ K L R A+ VI S++ K + VL ILE Sbjct: 308 GVIIVLNKWDK-SELDFDKTLKELK-LDRFKFLAYAPVISVSALSGKRVHVLLDKILEV 364 >gi|313897444|ref|ZP_07830987.1| ribosome biogenesis GTPase Der [Clostridium sp. HGF2] gi|312957814|gb|EFR39439.1| ribosome biogenesis GTPase Der [Clostridium sp. HGF2] Length = 436 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 17/189 (8%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G + GR NVGKSSL+N ++N++ + SN G T+ P K Sbjct: 173 GMTKFCVIGRPNVGKSSLVNAILNQERVI-VSNIEGTTRDA-IDTP-----FKREGKEYV 225 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G +N++ + L ERS + V ++ID G++ D+ V + + Sbjct: 226 VIDTAGIRKRGKVYENIEKYSVLRAMSAIERSDV--VLVVIDGEKGIRDQDKHVAGYAHE 283 Query: 148 KAVSYQIVLTKIDKLS-PTTAQETLEK---TKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 IV K D + T+EK ++L +Y V+ S++K++ I + Sbjct: 284 AGKGVVIVYNKWDAVEKDEQTMHTIEKEIRAQFLYLSYAP----VLFVSALKKQRIHTIL 339 Query: 204 KAILETINY 212 I E +Y Sbjct: 340 PVIDEVHDY 348 >gi|300708104|ref|XP_002996239.1| hypothetical protein NCER_100699 [Nosema ceranae BRL01] gi|239605522|gb|EEQ82568.1| hypothetical protein NCER_100699 [Nosema ceranae BRL01] Length = 393 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 10/84 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 I L I F G NVGKSS IN ++NRK + + S PG+T+ + + Sbjct: 226 IHFLENITEKNIGFIGYPNVGKSSTINAIINRKKV-KVSQTPGKTKFIQTILYG------ 278 Query: 81 NNLPAMALVDMPGYGYARAPKKNV 104 L+D PG + + K N+ Sbjct: 279 ---QDKILLDCPGLVFPKHSKTNL 299 >gi|238758839|ref|ZP_04620012.1| GTP-binding protein engA [Yersinia aldovae ATCC 35236] gi|238702947|gb|EEP95491.1| GTP-binding protein engA [Yersinia aldovae ATCC 35236] Length = 494 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + ++ A ++ PG T+ + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G+ + +D + ++ +S L V ++D R G+ DQ + Sbjct: 46 EVEGHEFIVIDTGGIDGTEDGVETKMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P TA Sbjct: 106 LRSREKATFLVANKTDGIDPDTA 128 >gi|118580146|ref|YP_901396.1| GTP-binding protein Era [Pelobacter propionicus DSM 2379] gi|259645964|sp|A1APR8|ERA_PELPD RecName: Full=GTPase Era gi|118502856|gb|ABK99338.1| GTP-binding protein Era [Pelobacter propionicus DSM 2379] Length = 296 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 26/181 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ K +A TS+ P T++ + N+ N + +D Sbjct: 11 VSIVGRPNVGKSTLLNRIIGEK-IAITSDKPQTTRNR----IQGIHNIANG--QIVFIDT 63 Query: 92 PGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG ++R K VD+ L+ + + L++D + D+ V L Sbjct: 64 PGIHACHSRLNKGMVDA-------ALAALRGVDLLLLVVDAGGAID--DRLVRDVLGGTG 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +VL K+D L+ LE+ + YP E++P S+ +G++ ++ET Sbjct: 115 TPVMLVLNKVDLLADKRV--LLERMAAWSQLYP--FREILPISAGSGEGVD----GLIET 166 Query: 210 I 210 + Sbjct: 167 V 167 >gi|312144699|ref|YP_003996145.1| tRNA modification GTPase TrmE [Halanaerobium sp. 'sapolanicus'] gi|311905350|gb|ADQ15791.1| tRNA modification GTPase TrmE [Halanaerobium sp. 'sapolanicus'] Length = 464 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 12/115 (10%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N + K A ++ PG T+ V +++ NLK +P + ++D G Sbjct: 233 GKPNVGKSSLLNYFLEEKR-AIVTDIPGTTRD----VIEEYVNLK-GIP-LKIIDTAGI- 284 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 R V+ G R +E++ L V ++D G+ + D ++ + K V Sbjct: 285 --RETADKVEKIGVERTRKSAEKADL--VLFMLDISQGLTEEDLQIYKLIKDKPV 335 >gi|330933554|ref|XP_003304212.1| hypothetical protein PTT_16708 [Pyrenophora teres f. teres 0-1] gi|311319295|gb|EFQ87669.1| hypothetical protein PTT_16708 [Pyrenophora teres f. teres 0-1] Length = 673 Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%) Query: 13 IFLRGVPEIGLLPKAGPPE--IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +FL P+I P P + I G NVGKSS IN L+ K ++ S PG+T+H Sbjct: 349 LFLEHAPDIDTGPNGEPRKTSIGLVGYPNVGKSSTINALIGAKKVS-VSATPGKTKHF 405 >gi|309791331|ref|ZP_07685854.1| GTP-binding protein Obg/CgtA [Oscillochloris trichoides DG6] gi|308226641|gb|EFO80346.1| GTP-binding protein Obg/CgtA [Oscillochloris trichoides DG6] Length = 438 Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust. Identities = 40/187 (21%), Positives = 82/187 (43%), Gaps = 22/187 (11%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G N GKS+L++++ + + +N P F+ L+ NL + + D Sbjct: 164 DVGLVGFPNAGKSTLLSVISAAQ--PKIANYP-------------FTTLQPNLGMVTVGD 208 Query: 91 MPGYGYARAPK--KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ-DVFSFLDK 147 + A P + + GL +L R + ++DC GV D D ++ ++ Sbjct: 209 YERFVVADIPGLIEGAHAGVGLGHDFLRHIERTRVIIHVVDC-AGVDGRDPLDDYAQINA 267 Query: 148 KAVSYQIVLTKIDKLSPTTAQ---ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + Y+ L K ++ Q E E + L R P A +++P ++ R+G++ L + Sbjct: 268 ELRQYRPELAKRPQVVALNKQDLPEAAENLERLQRELPVAPEDLVPIAAATREGLDALLR 327 Query: 205 AILETIN 211 + E ++ Sbjct: 328 RVTEVLH 334 >gi|326791376|ref|YP_004309197.1| ribosome-associated GTPase EngA [Clostridium lentocellum DSM 5427] gi|326542140|gb|ADZ83999.1| ribosome-associated GTPase EngA [Clostridium lentocellum DSM 5427] Length = 441 Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 13/134 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM--ALV 89 +A G+ NVGKSSL+N +V + + SN G T +D + + + L+ Sbjct: 180 VAIIGKPNVGKSSLVNKIVGEERVI-VSNIAGTT--------RDSVDTEVTIEGQEYVLI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+N++ + I+R ++ V +LID G+ + D + + Sbjct: 231 DTAGIRRRSKIKENIEKYS--IIRTIAAIDRADVVLILIDAEEGITEQDTKIAGMAHEAG 288 Query: 150 VSYQIVLTKIDKLS 163 IV+ K D + Sbjct: 289 KGCIIVVNKWDAIE 302 >gi|229014650|ref|ZP_04171764.1| tRNA modification GTPase mnmE [Bacillus mycoides DSM 2048] gi|228746661|gb|EEL96550.1| tRNA modification GTPase mnmE [Bacillus mycoides DSM 2048] Length = 458 Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust. Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDIVERIG--VERSKEMMSQADLVLIVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D L E + T + N VI TS ++ +GI+ L KAI Sbjct: 330 IVIVNKTD-LPQGIDMERV--TDLAVGN------RVITTSLIEEQGIDELEKAI 374 >gi|227498827|ref|ZP_03928967.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904279|gb|EEH90197.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 401 Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 67/173 (38%), Gaps = 26/173 (15%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + H ++ + A+ FL E K I G+ GKSSLIN L+ K A+ Sbjct: 44 IPHDVYGELAFRFL----EAWQKEKEQKVRICLFGQPGAGKSSLINELIGEKK-AKVGTG 98 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 T+ ++ VD+PGY AR PKK Y S L Sbjct: 99 TDTTKEAQVI----------ESGSVVYVDLPGYDTARFPKKG----------YFSHFDPL 138 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL-SPTTAQETLEK 173 + L + + D + FS L + V KID L +P + ++LE+ Sbjct: 139 QYDLFLCIFSGKLTEADTEFFSRLQRLGRVCLFVRNKIDGLYAPFRSLKSLEE 191 >gi|153941135|ref|YP_001392222.1| GTP-binding protein Era [Clostridium botulinum F str. Langeland] gi|189037261|sp|A7GHG2|ERA_CLOBL RecName: Full=GTPase Era gi|152937031|gb|ABS42529.1| GTP-binding protein Era [Clostridium botulinum F str. Langeland] gi|295320220|gb|ADG00598.1| GTP-binding protein Era [Clostridium botulinum F str. 230613] Length = 296 Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 + GR NVGKS+L+N ++ K L+ S P T+ ++ + +D L VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTEDNYQL-------VFVD 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG PK + G +V+ S+ + V LI+ + D + L + Sbjct: 59 TPG---IHKPKHKL---GEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + Sbjct: 113 VPVFLVLNKIDENPQEKVAETLKIYSELME-----FEEIIPISALKGKNIDLLKELMFKY 167 Query: 210 I 210 I Sbjct: 168 I 168 >gi|56207202|emb|CAI24815.1| novel interferon-inducible GTPase (IIGP) family member [Mus musculus] gi|126540999|emb|CAM46253.1| novel protein [Mus musculus] Length = 844 Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 14/134 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P IA +G + GKSS IN L ++ + G + P + + K LP + Sbjct: 480 APLNIAVTGETGTGKSSFINALRGVRDEEEGAAPTGVVETTMKRTP--YPHPK--LPNVT 535 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 + D+PG G P +N YL+E + +I K+ID + ++K Sbjct: 536 IWDLPGIGSTTFPPQN----------YLTEMKFGEYDFFIIISATCFKEIDAHLAKTIEK 585 Query: 148 KAVSYQIVLTKIDK 161 + V TKID+ Sbjct: 586 MNTKFYFVRTKIDQ 599 >gi|28493018|ref|NP_787179.1| bifunctional cytidylate kinase/GTP-binding protein [Tropheryma whipplei str. Twist] gi|28572231|ref|NP_789011.1| bifunctional cytidylate kinase/GTP-binding protein [Tropheryma whipplei TW08/27] gi|28410362|emb|CAD66748.1| putative GTP-binding protein [Tropheryma whipplei TW08/27] gi|28476058|gb|AAO44148.1| cytidylate kinase/GTP-binding protein fusion [Tropheryma whipplei str. Twist] Length = 686 Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 15/139 (10%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 +G P +A GR NVGKSSLIN L N + A + G T+ P D + + + Sbjct: 423 SGAPRVALIGRPNVGKSSLINQLTNSRR-AIVDDLAGTTRD-----PLDALAVIGD-KSW 475 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFS 143 VD G +K D + YL + LR LL+D H + + D + Sbjct: 476 LFVDTAGLRRKFKSQKGADFYA-----YLRATTVLRRTEIALLLLDASHAITEQDVRIAE 530 Query: 144 FLDKKAVSYQIVLTKIDKL 162 + + + I + K D L Sbjct: 531 MVVESGRALVIAINKWDLL 549 >gi|73662580|ref|YP_301361.1| GTP-binding protein EngA [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123642627|sp|Q49XS9|DER_STAS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|72495095|dbj|BAE18416.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 436 Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 11/144 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + SN G T+ V ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEDRVI-VSNVAGTTRDA---VDTEYSYDDQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 +N + + L ERS + + ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYENTEKYSVLRALKAIERSNV--ILIVIDAEQGIIEQDKRVAGYAHEEGKAIVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIR 179 + K D + T T++K K +R Sbjct: 293 VNKWDTVDKET--NTMKKFKDEVR 314 >gi|332162632|ref|YP_004299209.1| GTP-binding protein EngA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606735|emb|CBY28233.1| GTP-binding protein EngA [Yersinia enterocolitica subsp. palearctica Y11] gi|325666862|gb|ADZ43506.1| GTP-binding protein EngA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859281|emb|CBX69631.1| GTP-binding protein engA [Yersinia enterocolitica W22703] Length = 494 Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + ++ A ++ PG T+ + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G+ + +D + ++ +S L V ++D R G+ DQ + Sbjct: 46 EVEGHEFIVIDTGGIDGTEDGVETKMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P TA Sbjct: 106 LRSREKATFLVANKTDGIDPDTA 128 >gi|160892719|ref|ZP_02073509.1| hypothetical protein CLOL250_00249 [Clostridium sp. L2-50] gi|156865760|gb|EDO59191.1| hypothetical protein CLOL250_00249 [Clostridium sp. L2-50] Length = 440 Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 15/154 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L+ +N S+ G T+ + + N + Sbjct: 178 PRIAIIGKPNVGKSSIINKLLG-ENRVIVSDIAGTTRDAI------DTEIVRNGTEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + I+R +S L+ID GV D + ++ Sbjct: 231 DTAGLRRKSKIKEDIERYS--IIRTVSAVERCNVAVLVIDATEGVTDQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPTT------AQETLEKTKYL 177 IV+ K D + +E EK Y+ Sbjct: 289 KGMIIVVNKWDAVEKDDKTIYKFTKEIREKLSYM 322 Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 29/175 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K ++ + PG T+ + D S L N ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEK-ISIVKDTPGVTRDRIY---ADVSWLDYNF---TII 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P+ + +I++ + E++ T + + D R G+ D V Sbjct: 57 DTGGI----EPESD-----NIILKSMREQAEIAIETADVIIFMTDVRQGLVDDDHKVVQM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L K +V+ K+D E Y N P +P S R GI Sbjct: 108 LRKSKKPVILVVNKVDSF------EKYMNDVYEFYNLGLGDP--VPISGASRLGI 154 >gi|220928031|ref|YP_002504940.1| GTP-binding protein Era [Clostridium cellulolyticum H10] gi|254783293|sp|B8I736|ERA_CLOCE RecName: Full=GTPase Era gi|219998359|gb|ACL74960.1| GTP-binding protein Era [Clostridium cellulolyticum H10] Length = 298 Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 23/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N + +K +A SN P T++ V + N + L+D Sbjct: 8 VSVIGRPNVGKSTLLNTITGQK-IAIMSNKPQTTRNTIRGV------ITNKECQLILIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V SE + + L++ D ++ L + Sbjct: 61 PGI---HKPKTKL---GEYMVNVASETIKEVDLILFLVEANTQPGAQDVNIIQQLKQIKT 114 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K+D +S +K +I +Y +IP S++K GI+++ K L+ Sbjct: 115 PVFLILNKVDLISK-------DKLLAIIDSYSKLMDFKAIIPISALKNDGIDLILKEALD 167 Query: 209 TI 210 I Sbjct: 168 YI 169 >gi|293192791|ref|ZP_06609686.1| ribosome-associated GTPase EngA [Actinomyces odontolyticus F0309] gi|292820038|gb|EFF79036.1| ribosome-associated GTPase EngA [Actinomyces odontolyticus F0309] Length = 517 Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 30/143 (20%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG----RTQHLNFFVPKDFSNLKNN 82 AG P +A GR NVGKS+L+N ++ R+ A + PG R + + +DF+ Sbjct: 79 AGLPVLAVVGRPNVGKSTLVNRILGRRE-AVVQDTPGVTRDRVSYPAEWAGRDFT----- 132 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQI 137 LVD G+ +D G + R ++E++ + V L++D GV Sbjct: 133 -----LVDTGGW--------EIDVKG--LDRSVAEQAEIAVDLADAVVLVLDATVGVTAS 177 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ + L K + K+D Sbjct: 178 DERIVEMLRAKKKPIILAANKVD 200 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 16/28 (57%), Positives = 18/28 (64%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVN 51 LP GP +A GR NVGKSSL+N L Sbjct: 251 LPSGGPRRVALVGRPNVGKSSLLNALAG 278 >gi|291563224|emb|CBL42040.1| ribosome-associated GTPase EngA [butyrate-producing bacterium SS3/4] Length = 441 Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 11/158 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L+ +N SN G T+ D ++N + + Sbjct: 178 PRIAIVGKPNVGKSSIINKLLG-ENRVIVSNIAGTTRD-----AVDTEIVRNGTEYI-FI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + I+R ++ V ++ID G+ + D + + Sbjct: 231 DTAGLRRKSKIKEDIERYS--IIRTVTAVERADVVLMVIDAVEGITEQDAKIAGIAHDRG 288 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAH 185 +V+ K D + T E K K + P A Sbjct: 289 KGVIVVVNKWDAIEKNDKTIYEYTRKLKETLSYMPYAE 326 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 29/175 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + D + L NN L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAG-STISIVKDTPGVTRDRIY---ADCTWLNNNF---TLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P +I+ + E++ T + ++D R G+ D V Sbjct: 57 DTGGI----EPDSK-----DIILAQMREQAQIAIDTADVIIFIVDVRQGLVDADSKVADM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L K + + K+D ++ Y N P +P S+ R G+ Sbjct: 108 LRKSKKPVVLAVNKVDSMAK------FGNDVYEFYNLGIGDP--VPVSAASRLGL 154 >gi|206901698|ref|YP_002251036.1| GTP-binding protein Era [Dictyoglomus thermophilum H-6-12] gi|206740801|gb|ACI19859.1| GTP-binding protein Era [Dictyoglomus thermophilum H-6-12] Length = 297 Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 16/140 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 I G+ N GKS+LIN+LV K ++ ++ P T+ L +D + Sbjct: 9 IGIVGKPNAGKSTLINLLVGEK-VSIVADKPQTTRQRILGVLTLED--------AQFIFL 59 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG+ PK + + ++ E S + V +ID + + ++ + F+ + Sbjct: 60 DTPGWF---PPKHLLGEYMQKTIKKTIEDSDI--VLYVIDSSVELDEDNRTLLKFVKDQG 114 Query: 150 VSYQIVLTKIDKLSPTTAQE 169 Y ++L KID +SP +E Sbjct: 115 KPYLVLLNKIDMVSPKVLEE 134 >gi|281425284|ref|ZP_06256197.1| hypothetical protein HMPREF0971_02256 [Prevotella oris F0302] gi|299141484|ref|ZP_07034620.1| ribosome-associated GTPase EngA [Prevotella oris C735] gi|281400577|gb|EFB31408.1| ribosome-associated GTPase EngA [Prevotella oris F0302] gi|298576820|gb|EFI48690.1| ribosome-associated GTPase EngA [Prevotella oris C735] Length = 437 Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust. Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 19/165 (11%) Query: 24 LPKAGP-------PEIAFSGRSNVGKSSLINILVNR-KNLARTSNAPGRTQHLNFFVPKD 75 LP+ P P A GR N GKSS+IN + +N+ R F Sbjct: 163 LPQENPETIEDEIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFDKFG 222 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 F LVD G ++++ + ++R + L++D GV+ Sbjct: 223 FD--------FYLVDTAGIRRKNKVSEDLEFYS--VMRSIRAIENSDVCILMLDATRGVE 272 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 D ++F + K S +V+ K D L +Q+ ++ + IRN Sbjct: 273 AQDMNIFQLIQKNNKSLVVVVNKWD-LVEEKSQKVIDTFEAAIRN 316 Score = 38.5 bits (88), Expect = 0.67, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 17/135 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRR-AIVSDTAGTTRD------RQYGKCSWNAKEFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL---SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G+ K+ D + I R + +E + L V L+D GV D+DV + L + Sbjct: 58 GGWVV-----KSDDIFEDAIRRQVLVATEEADL--VLFLVDVTTGVTDWDEDVATILRRA 110 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D S Sbjct: 111 KLPVILVANKVDNSS 125 >gi|256372122|ref|YP_003109946.1| small GTP-binding protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008706|gb|ACU54273.1| small GTP-binding protein [Acidimicrobium ferrooxidans DSM 10331] Length = 429 Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 12/139 (8%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRT-QHLNFFVPKDFSNLKNNLPAMALVDMPGY 94 GR NVGKSSL N LV A + PG T L+ V D ++ VD G Sbjct: 183 GRPNVGKSSLFNRLVGEPR-AIVYDQPGTTVDTLDTVVETDEGRIR-------FVDTAGL 234 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 + + + +VR L+ L+ID GV DQ + +D + Sbjct: 235 RRRSRYESGTEYFS--MVRTLAAIDAADVSLLVIDATEGVTGWDQRLVERIDAAGSPVVV 292 Query: 155 VLTKIDKLSPTTAQETLEK 173 VL K D+L A++ +E+ Sbjct: 293 VLNKWDQLD-AEAKDRIER 310 >gi|269127039|ref|YP_003300409.1| small GTP-binding protein [Thermomonospora curvata DSM 43183] gi|268311997|gb|ACY98371.1| small GTP-binding protein [Thermomonospora curvata DSM 43183] Length = 463 Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 22/140 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP +A GR NVGKS+L+N ++ R+ A + PG T+ + D+S + + + Sbjct: 24 PPVVAVVGRPNVGKSTLVNRVLGRRE-AVVEDVPGVTRDRVSY-EADWSGRR-----LTI 76 Query: 89 VDMPGY-----GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 VD G+ G A A + R E + + V ++D G +D+ V Sbjct: 77 VDTGGWLPDATGLAAAVAEQ--------ARLAVELADV--VLFVVDATVGATDVDEAVVD 126 Query: 144 FLDKKAVSYQIVLTKIDKLS 163 L + +V K+D + Sbjct: 127 ILRRSGKPVLLVANKVDDAA 146 >gi|109947730|ref|YP_664958.1| GTP-binding protein EngA [Helicobacter acinonychis str. Sheeba] gi|123362586|sp|Q17WL7|DER_HELAH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|109714951|emb|CAJ99959.1| GTP-binding protein [Helicobacter acinonychis str. Sheeba] Length = 462 Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N+L +K + S+ G T P D + L N + VD Sbjct: 202 QVGIIGRVNVGKSSLLNVLT-QKERSIVSSVAGTT-----IDPIDETILVKN-QKICFVD 254 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + + ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 255 TAGIRH-KGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 311 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + IE ++ I+E Sbjct: 312 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKTRHIEEIKHKIIE 366 >gi|152977683|ref|YP_001377200.1| tRNA modification GTPase TrmE [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189036194|sp|A7GVP7|MNME_BACCN RecName: Full=tRNA modification GTPase mnmE gi|152026435|gb|ABS24205.1| tRNA modification GTPase TrmE [Bacillus cytotoxicus NVH 391-98] Length = 458 Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LRLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+++F + K + Sbjct: 277 GI---RETEDIVEQIG--VERSKEMMSQADLVLIVVNYSEPLTNEDEELFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D P + +E+ L + VI TS ++ KG++ L KAI Sbjct: 330 IVIVNKTD--LPQKIE--MERVTEL-----ASEKRVITTSLIEEKGVDELEKAI 374 >gi|238788166|ref|ZP_04631961.1| GTP-binding protein engA [Yersinia frederiksenii ATCC 33641] gi|238723753|gb|EEQ15398.1| GTP-binding protein engA [Yersinia frederiksenii ATCC 33641] Length = 494 Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + ++ A ++ PG T+ + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G+ + +D + ++ +S L V ++D R G+ DQ + Sbjct: 46 EVEGHEFIVIDTGGIDGTEDGVETKMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P TA Sbjct: 106 LRSREKATFLVANKTDGIDPDTA 128 >gi|310828164|ref|YP_003960521.1| Uncharacterized protein/domain associated with GTPase-like protein [Eubacterium limosum KIST612] gi|308739898|gb|ADO37558.1| Uncharacterized protein/domain associated with GTPase-like protein [Eubacterium limosum KIST612] Length = 380 Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 13/146 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G + GKSS++N V KN+A T T+ + + KD S + L Sbjct: 25 PNILICGATGAGKSSVVN-WVFGKNVATTGTGRPLTRGITEYSSKDIS--------VNLF 75 Query: 90 DMPGYGYAR----APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 D GY A + NV+ W G Y + V +D V L Sbjct: 76 DTEGYEIGEEKISAYRDNVEKWIGERREGALAGQIHEAWYCISAANKRVTDMDLSVVQTL 135 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETL 171 +K + +VLT++D + QE L Sbjct: 136 QEKNIPTAVVLTQLDCVDYDEYQELL 161 >gi|170719735|ref|YP_001747423.1| selenocysteine-specific translation elongation factor [Pseudomonas putida W619] gi|169757738|gb|ACA71054.1| selenocysteine-specific translation elongation factor [Pseudomonas putida W619] Length = 640 Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 17/177 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I +G + GK++L+ L + R R + + + ++ L P +D+ Sbjct: 3 IGTAGHIDHGKTALLQALTGQAGDHRQEE---RERGMTIDLGYRYAALAEGAPLTGFIDV 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG+ I L+ + V L++ GV ++ + ++ + Sbjct: 60 PGHER-------------FIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGIP 106 Query: 152 YQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V ++K D+++P E + L+ P A P SSV +G+E LR A+L Sbjct: 107 LALVAISKCDRVAPVRVAEVQVQIAQLLAPGPYAGAAQFPLSSVTGEGVEALRHALL 163 >gi|288930105|ref|ZP_06423943.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 317 str. F0108] gi|288328578|gb|EFC67171.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 317 str. F0108] Length = 437 Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 15/182 (8%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNR-KNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 G P A GR N GKSS++N + +N+ R F F Sbjct: 174 GIPRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRFDKFGFD--------F 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G ++++ + + E S + C+ L+ID G++ D ++F + Sbjct: 226 YLVDTAGIRRKNKVTEDLEFYSVMRSIRAIEHSDV-CI-LMIDATRGIESQDMNIFQLIQ 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEVLR 203 K S +V+ K D L P Q+ ++ + IR P + ++ K++ +VL Sbjct: 284 KNQKSLVVVVNKWD-LVPDKDQKVIKTFENAIRERMAPFVDFPIIFASALTKQRIFKVLE 342 Query: 204 KA 205 A Sbjct: 343 TA 344 >gi|317132122|ref|YP_004091436.1| ribosome-associated GTPase EngA [Ethanoligenens harbinense YUAN-3] gi|315470101|gb|ADU26705.1| ribosome-associated GTPase EngA [Ethanoligenens harbinense YUAN-3] Length = 441 Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 19/181 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N LV R+ ++ + PG T+ + P ++ L Sbjct: 2 GRPIVAIVGRPNVGKSTLFNKLVGRR-ISIVEDTPGVTRD-RIYAPCEWCGHTFLLADTG 59 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++M K + G+ + + T + + D R GV D ++ L + Sbjct: 60 GIEM---------KSDDVFLSGIREQAKAAIDTADVIIFMTDLRSGVTAQDNEIADMLRR 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K D L T ++ Y N P P SSV G L ++ Sbjct: 111 SHRPVVLCVNKADTLGNTPSE------VYEFYNLGLGDP--FPVSSVHGHGTGDLLDHVV 162 Query: 208 E 208 E Sbjct: 163 E 163 >gi|17509405|ref|NP_493388.1| UNCoordinated family member (unc-59) [Caenorhabditis elegans] gi|6580259|emb|CAB63329.1| C. elegans protein W09C5.2, confirmed by transcript evidence [Caenorhabditis elegans] Length = 459 Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 81/201 (40%), Gaps = 39/201 (19%) Query: 36 GRSNVGKSSLIN--ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALVDM 91 GRS +GKS+ IN L NL +AP V + L N + + LVD Sbjct: 54 GRSGLGKSTFINTLFLAEINNLNEKESAPTHPHPSTVRVEEKLVKLVENSVSLNLTLVDT 113 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLS--------------------ERSTLRCVYLLIDCR 131 PG+G A N W IV Y+ ++ C+Y + Sbjct: 114 PGFGDA---VNNSKCWEP-IVNYVESKFFEQFCEETRIDRGEKIVDKCVHLCLYFIEPSG 169 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH------ 185 HG+K ID ++ L + V+ V++K D L T E L K ++++ TA Sbjct: 170 HGLKPIDIELMKHLHGR-VNIVPVISKADCL---TRDELLRFKKQIVKDAETAEIKLYKF 225 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 PE + + IE LRKA+ Sbjct: 226 PE-LEDPYTDKVAIEKLRKAL 245 >gi|195125988|ref|XP_002007456.1| GI12960 [Drosophila mojavensis] gi|193919065|gb|EDW17932.1| GI12960 [Drosophila mojavensis] Length = 1175 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 27/139 (19%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFSNLKNNL 83 G + GK+ +++ L R+ + S A G TQ + VP K+ +N ++ L Sbjct: 593 GHVDTGKTKILDKL--RRTHVQDSEAGGITQQIGATNVPIDAIKEQTKYVKNAANFEHRL 650 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + ++D PG+ +S+ L R S L++D HG++ + Sbjct: 651 PGLLIIDTPGH----------ESFSNLRNRG---SSLCDIAILVVDIMHGLEPQTIESIQ 697 Query: 144 FLDKKAVSYQIVLTKIDKL 162 L KK + + L KID+L Sbjct: 698 LLKKKKCPFIVALNKIDRL 716 >gi|158320502|ref|YP_001513009.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs] gi|158140701|gb|ABW19013.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs] Length = 280 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 10/76 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P I G NVGKSSLIN L RK+ +T + PG T+ K + LK N M L Sbjct: 120 PARIMIVGIPNVGKSSLINKLAGRKS-TQTGDRPGVTKS------KQWIRLKGN---MEL 169 Query: 89 VDMPGYGYARAPKKNV 104 +D PG + + + V Sbjct: 170 LDTPGILWPKFEDEEV 185 >gi|45658262|ref|YP_002348.1| GTP-binding protein EngA [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|73919333|sp|Q72PQ1|DER_LEPIC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|45601504|gb|AAS70985.1| GTP-binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 489 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 23/186 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNL 83 P P ++ GR NVGKS+L N L+ +K LA T + PG T+ L+ + ++ +L Sbjct: 25 PGKKIPVVSIVGRQNVGKSTLFNSLL-KKKLAITEDYPGVTRDVLSARIYQEEKDLD--- 80 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L D PG +N DS I+ Y R + V+LL ++ + D + Sbjct: 81 --FYLCDTPGLDI-----ENPDSLSQTILETAYGQLRESDVIVFLL--DKNLITTADHGL 131 Query: 142 FSFLDKK-AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++L ++ V+ + ++ ++K + LE+ Y EV+P S++ RK + Sbjct: 132 LNYLRREDKVANKPIIYCVNKADKELDEFDLEEF------YRMGLSEVLPISAIGRKNLG 185 Query: 201 VLRKAI 206 +L + I Sbjct: 186 LLLEKI 191 >gi|300113379|ref|YP_003759954.1| GTP-binding protein Era [Nitrosococcus watsonii C-113] gi|299539316|gb|ADJ27633.1| GTP-binding protein Era [Nitrosococcus watsonii C-113] Length = 307 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 40/191 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA--LV 89 IA GR NVGKSSL+N ++++K ++ TS P T+H + LP + V Sbjct: 19 IAIIGRPNVGKSSLLNRILDQK-ISITSRRPQTTRHRILGI--------KTLPGIQAIYV 69 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVK--QIDQDVFSFL 145 D PG+ D L+ RYL+ STL V L++ + + D+ + L Sbjct: 70 DTPGFQ---------DKERRLMNRYLNRAIDSTLEEVDLILFVIEAFQFSKDDEWILQRL 120 Query: 146 DKKAVSYQIVLTKIDK------LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + A +VL K+D+ L P A TL K +IP S+ K + Sbjct: 121 RRCAAPIVLVLNKVDRIIDKKSLLPVIA--TLSKK--------IEFAAIIPVSAWKGDNV 170 Query: 200 EVLRKAILETI 210 VL + E + Sbjct: 171 AVLESKVAELL 181 >gi|301123827|ref|XP_002909640.1| ras family GTPase, putative [Phytophthora infestans T30-4] gi|262100402|gb|EEY58454.1| ras family GTPase, putative [Phytophthora infestans T30-4] Length = 503 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 11/117 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR+NVGKS+L N L ++ A N PG T +D + L + L + Sbjct: 44 IALVGRTNVGKSTLFNRLTKTRS-AIVHNVPGTT--------RDRRYKRATLAGLELDVV 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G AP ++ G++ + V+ L+D R G+ +D+ +L K+ Sbjct: 95 DTGGLEDAPSGTLEE--GMLEQTRLAVHEADLVFFLVDGRQGITPVDKHFARWLRKE 149 >gi|206895221|ref|YP_002246509.1| small GTP-binding protein domain [Coprothermobacter proteolyticus DSM 5265] gi|206737838|gb|ACI16916.1| small GTP-binding protein domain [Coprothermobacter proteolyticus DSM 5265] Length = 424 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 36/188 (19%) Query: 22 GLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 GL+P A IA GR NVGKSSLIN + + ++A S+ PG T P + Sbjct: 7 GLIPHTAFRKHIAIVGRRNVGKSSLINAIAGQ-DIALVSDVPGTTTD-----PVYKTLEV 60 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY------LLIDCRHGV 134 L + L+D PG GL+ + ER+ R +Y L++D + G Sbjct: 61 KPLGPVTLIDTPGLDDE-----------GLLGQKRVERAK-RALYKADAAILVVDDKPGA 108 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + + S L ++ + I + K D E TK L+++Y + V+ ++ Sbjct: 109 --FEDFIVSLLRNLSIPFVIAVNKSD---------VTEDTKTLVKDYEPFNVPVVKVAAA 157 Query: 195 KRKGIEVL 202 + K I L Sbjct: 158 QGKNISEL 165 >gi|15639676|ref|NP_219126.1| GTP-binding protein EngA [Treponema pallidum subsp. pallidum str. Nichols] gi|189025914|ref|YP_001933686.1| GTP-binding protein EngA [Treponema pallidum subsp. pallidum SS14] gi|8134438|sp|P96128|DER_TREPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238689339|sp|B2S3S8|DER_TREPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|1732241|gb|AAB38705.1| GTP-binding protein [Treponema pallidum] gi|3322993|gb|AAC65658.1| GTP-binding protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018489|gb|ACD71107.1| GTP-binding protein [Treponema pallidum subsp. pallidum SS14] gi|291060055|gb|ADD72790.1| ribosome-associated GTPase EngA [Treponema pallidum subsp. pallidum str. Chicago] Length = 460 Score = 38.9 bits (89), Expect = 0.47, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 19/158 (12%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-----HLN 69 L V E LPK +A G+ N GKS+L+N L+ R+ ++ + G T+ H+ Sbjct: 183 LFSVDERRELPKDDVVRLAIVGKPNTGKSTLMNYLM-RRTVSLVCDRAGTTRDVVTGHVE 241 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K + D G + ++++ + ++R +S + + V ++D Sbjct: 242 FKQYK-----------FIIADTAGIRKRQKVYESIEYYS--VIRAISILNAVDIVLYIVD 288 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA 167 R G + D+ + S + K+ + +L K D L +T+ Sbjct: 289 ARDGFSEQDKKIVSQISKRNLGVIFLLNKWDLLEGSTS 326 >gi|258516219|ref|YP_003192441.1| GTP-binding protein Era [Desulfotomaculum acetoxidans DSM 771] gi|257779924|gb|ACV63818.1| GTP-binding protein Era [Desulfotomaculum acetoxidans DSM 771] Length = 300 Score = 38.9 bits (89), Expect = 0.48, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ RK +A S+ P T+H K + L + + +D Sbjct: 12 VAIIGRPNVGKSTLMNRMIGRK-IAIMSDKPQTTRH------KIYCVLTRDNYQVIFLDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + L+ LS + + L++ D+ + L K Sbjct: 65 PG---IHKPKHKLGQH--LVDTSLSTFGEVDLILFLVEANSFCGAGDRYILEHLAKIKTP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+D L P ++ L L Y EVIP S++ ++ L + I Sbjct: 120 VFLVINKVD-LVP--KEQLLPLIDELHSKY--KFQEVIPVSALNGDNVDRLERLI 169 >gi|325920676|ref|ZP_08182586.1| GTP-binding protein Era [Xanthomonas gardneri ATCC 19865] gi|325548866|gb|EGD19810.1| GTP-binding protein Era [Xanthomonas gardneri ATCC 19865] Length = 285 Score = 38.9 bits (89), Expect = 0.49, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 24/179 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALVDMPG 93 GR NVGKS+L N LV K ++ SN P T+H + P +ALVD PG Sbjct: 3 GRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIA--------TFPEGQLALVDTPG 53 Query: 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF--LDKKAVS 151 R K+ ++ V + R +L V + + ++D +F L V Sbjct: 54 L--HREQKRAMNR-----VMNRAARGSLEGVDAAVLVIEAGRWDEEDTLAFKVLSDSKVP 106 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D+L TA R + HP S++KRKG+E L +L+ + Sbjct: 107 VVLVVNKVDRLKDKTALFPFLAQVSEGRTFAAVHP----VSALKRKGLEALVGDLLKLV 161 >gi|315651881|ref|ZP_07904884.1| ribosome-associated GTPase EngA [Eubacterium saburreum DSM 3986] gi|315485883|gb|EFU76262.1| ribosome-associated GTPase EngA [Eubacterium saburreum DSM 3986] Length = 443 Score = 38.9 bits (89), Expect = 0.49, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 9/109 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L +N S+ G T+ V + NN + Sbjct: 179 PRIAIVGKPNVGKSSIINRLTG-QNRVIVSDIAGTTRDAIDTV------VVNNKQEYIFI 231 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 D G K++++ + I+R ++ V L+ID GV + D Sbjct: 232 DTAGLRRKSKVKEDIERYS--IIRTVTAVERADVVILVIDASEGVTEQD 278 >gi|302380979|ref|ZP_07269440.1| tRNA modification GTPase TrmE [Finegoldia magna ACS-171-V-Col3] gi|303234699|ref|ZP_07321327.1| tRNA modification GTPase TrmE [Finegoldia magna BVS033A4] gi|302311200|gb|EFK93220.1| tRNA modification GTPase TrmE [Finegoldia magna ACS-171-V-Col3] gi|302494182|gb|EFL53960.1| tRNA modification GTPase TrmE [Finegoldia magna BVS033A4] Length = 452 Score = 38.9 bits (89), Expect = 0.49, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 30/178 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVDMPGY 94 G+ NVGKSSL+N L+ ++N A ++ PG T+ + ++ D +LK N D G Sbjct: 224 GKPNVGKSSLLNALL-KENRAIVTDIPGTTRDVIEEYIDLDGISLKIN-------DTAGI 275 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQ 153 R + V+ G + + +S S + + D D+ + + DKK++ Sbjct: 276 ---RDTEDIVEKIG--VEKSVSFISDSDLIIAIFDSSREFDDEDRKILDLIRDKKSI--- 327 Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++L KID E LE EVI TS +GIE L I+E N Sbjct: 328 VLLNKIDLDGEFDVDENLEGI------------EVIHTSIKNNEGIEDLENKIIEMFN 373 >gi|294675621|ref|YP_003576236.1| tRNA modification GTPase TrmE [Rhodobacter capsulatus SB 1003] gi|294474441|gb|ADE83829.1| tRNA modification GTPase TrmE [Rhodobacter capsulatus SB 1003] Length = 427 Score = 38.9 bits (89), Expect = 0.49, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 15/101 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+A GR N GKS+L+N L R+ A TS G T+ + V D S L A+ L+D Sbjct: 214 EVAIVGRPNAGKSTLLNALAGREA-AITSEVAGTTRDV-IEVRMDLSGL-----AVTLLD 266 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLID 129 G R + V++ G + R + ++R+ LR V+LL D Sbjct: 267 TAGL---RDTEDQVEAIG--VARAIERAKRADLR-VFLLDD 301 >gi|292490850|ref|YP_003526289.1| GTP-binding protein Era [Nitrosococcus halophilus Nc4] gi|291579445|gb|ADE13902.1| GTP-binding protein Era [Nitrosococcus halophilus Nc4] Length = 303 Score = 38.9 bits (89), Expect = 0.49, Method: Compositional matrix adjust. Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 26/194 (13%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +PE L A +A GR NVGKSSL+N ++ +K ++ T+ P T+H Sbjct: 1 MPEKMLTQGARCGYVAIIGRPNVGKSSLLNCILGQK-ISITARRPQTTRH-------RIL 52 Query: 78 NLKNNLPAMAL-VDMPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGV 134 +K + A A+ VD PG D L+ RYL + S + V L++ Sbjct: 53 GIKTSPDAQAIYVDTPGLQ---------DKERRLMNRYLNRAADSAIEDVDLILFIVEAY 103 Query: 135 K--QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + + D+ + L ++ V +VL K+D+++ + L + L + A ++P S Sbjct: 104 RFTEEDERILQRLRRRGVPIVLVLNKVDRVA--DKKTLLPIMEQLSKKMEFAA--IVPVS 159 Query: 193 SVKRKGIEVLRKAI 206 + K + VL K + Sbjct: 160 AWKGDNVAVLEKKV 173 >gi|238916971|ref|YP_002930488.1| GTP-binding protein [Eubacterium eligens ATCC 27750] gi|259645875|sp|C4Z0C8|DER_EUBE2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238872331|gb|ACR72041.1| GTP-binding protein [Eubacterium eligens ATCC 27750] Length = 441 Score = 38.9 bits (89), Expect = 0.49, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 15/151 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A G+ NVGKSS+IN LV KN S+ G T+ + +K N + Sbjct: 178 PKVAIIGKPNVGKSSIINKLVG-KNRVIVSDIAGTTRDAI------DTAIKYNGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + I+R ++ L+ID GV + D + ++ Sbjct: 231 DTAGLRRKSKIKEDLERFS--IIRTVAAVERADIAILVIDATEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 I + K D + E +KT Y N Sbjct: 289 KGIIIAVNKWDDI------EKNDKTIYEFTN 313 >gi|221060130|ref|XP_002260710.1| GTPase [Plasmodium knowlesi strain H] gi|193810784|emb|CAQ42682.1| GTPase, putative [Plasmodium knowlesi strain H] Length = 788 Score = 38.9 bits (89), Expect = 0.49, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 9/62 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS+IN LV K ++ S PG+T+H F + N L D Sbjct: 535 VGFIGFPNVGKSSIINSLVGLKKVS-VSRQPGKTKH--------FQTIPLNRHGFCLCDC 585 Query: 92 PG 93 PG Sbjct: 586 PG 587 >gi|119713602|gb|ABL97653.1| GTP-binding protein Era [uncultured marine bacterium EB0_39H12] Length = 297 Score = 38.9 bits (89), Expect = 0.49, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 45/193 (23%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN-NLPAMALVD 90 ++ G++N GKS+L+N ++ +K +A TS P T+H F +K + VD Sbjct: 9 VSIVGKTNAGKSTLLNNILGQK-IAITSRKPQTTRH-------RFQGIKTKGQNQIIFVD 60 Query: 91 MPGY--GYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLD 146 PG+ G RA + RY+++ ++ +R V +++ ++ ++D+ Sbjct: 61 TPGFHSGQKRA-----------LNRYMNKVASNAMRGVDIVLYMVDNLRWSEEDLKRL-- 107 Query: 147 KKAVSYQ----IVLTKIDKLSPTTAQETLEKTKYLI-----RNYPTAHPEVIPTSSVKRK 197 K +S + +V+ KIDK LE L+ R+ +IP S++K Sbjct: 108 -KTISDETFVILVINKIDK---------LENKNLLLPYIEERSKENLFSNIIPISALKGN 157 Query: 198 GIEVLRKAILETI 210 G+E L K+I E + Sbjct: 158 GVEDLVKSISEKL 170 >gi|260887478|ref|ZP_05898741.1| tRNA modification GTPase TrmE [Selenomonas sputigena ATCC 35185] gi|330840116|ref|YP_004414696.1| tRNA modification GTPase mnmE [Selenomonas sputigena ATCC 35185] gi|260862765|gb|EEX77265.1| tRNA modification GTPase TrmE [Selenomonas sputigena ATCC 35185] gi|329747880|gb|AEC01237.1| tRNA modification GTPase mnmE [Selenomonas sputigena ATCC 35185] Length = 459 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 28/182 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E A GR NVGKSSL+N L+ R++ A ++ PG T+ ++++++ +P + ++D Sbjct: 224 ETAIVGRPNVGKSSLLNALL-REDRAIVTDVPGTTRD----TIEEYADI-GGVP-LRIID 276 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + V+ G R + + L V L D ++ D+++ + L+ K Sbjct: 277 TAGI---RTTEDAVERIGVEKARAHVKSAAL--VLALFDGSRPLEAEDEEILALLEGK-- 329 Query: 151 SYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 IV+TK D ++ T E+ + L+ H +I ++ + +GI L AILE Sbjct: 330 DALIVVTKSDLPRVLDT------ERLQNLV------HLPLIEITTKEEEGISPLAAAILE 377 Query: 209 TI 210 + Sbjct: 378 KV 379 >gi|258626728|ref|ZP_05721550.1| GTP-binding protein [Vibrio mimicus VM603] gi|258580984|gb|EEW05911.1| GTP-binding protein [Vibrio mimicus VM603] Length = 324 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V D N A+ VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETD-----GNYQAI-YVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D++ LE +K + +++P S+ + K +VL+K + E Sbjct: 140 PVVLCVNKVDQVKDRNEVMLHMLELSKRM------QFVDIVPISAKQGKNTDVLKKHVRE 193 Query: 209 TI 210 + Sbjct: 194 HL 195 >gi|304318133|ref|YP_003853278.1| tRNA modification GTPase TrmE [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779635|gb|ADL70194.1| tRNA modification GTPase TrmE [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 458 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 24/171 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+N +N A ++ PG T+ + +++ N+K +P + L+D G Sbjct: 229 GKPNVGKSSLLNALLN-ENRAIVTDIPGTTRD----IIEEYLNIK-GIP-IKLIDTAGI- 280 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + R + + + D +++ D ++ +D K V Y V Sbjct: 281 --RDTDELVEKIG--VERSKEAINKADLIIFVFDNSRPLEKEDYEILRIIDDKNVLY--V 334 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L KID S E IR ++ I SSV ++G + L + Sbjct: 335 LNKIDLPSMIDLDE--------IR--RISNENYISLSSVTKEGFDALENTV 375 >gi|253682642|ref|ZP_04863439.1| GTP-binding protein Era [Clostridium botulinum D str. 1873] gi|253562354|gb|EES91806.1| GTP-binding protein Era [Clostridium botulinum D str. 1873] Length = 294 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 I+ GR NVGKS+LIN ++ K L+ S P T+ ++ + KD L +D Sbjct: 7 ISIIGRPNVGKSTLINEILGEK-LSIVSCRPQTTRNNIRAILTKDDYQL-------VFLD 58 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG P+ + + ++ S + + + + ++ + + D+ + + Sbjct: 59 TPG---IHKPRHKLGEY--MVKAAESSKDEVDLIVFITTPQNEIGKGDELILENIKNSKK 113 Query: 151 SYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ KID+ P ETL+K ++Y+ E+IP S+ K K +++L Sbjct: 114 PVFLIVNKIDENPPELVAETLKKYSEYM------EFKEIIPISAQKNKNVDIL 160 >gi|223557988|gb|ACM90994.1| GTPase [uncultured bacterium URE4] Length = 424 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 26/172 (15%) Query: 21 IGLLPKAGP--------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 + +LPK P P IA GR NVGKSSL N L+ + T A ++ + Sbjct: 148 VKVLPKDVPEEEDHSDIPHIAIVGRPNVGKSSLTNALLGEERNIVTPVAGTTRDSISTYY 207 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K F + LVD G ++++ + L E S + C+ L+ID Sbjct: 208 NK-FGH------EFMLVDTAGMRKRAKVTEDLEFYSVLRAMRTIEHSDV-CI-LMIDATL 258 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 G++ D ++F+ + K IV+ K D EK +R+Y A Sbjct: 259 GMEAQDMNIFNIIQKNRKGCVIVVNKWD---------LFEKESNTMRDYTEA 301 >gi|167931392|ref|NP_001108151.1| interferon-inducible GTPase family member [Mus musculus] gi|56207204|emb|CAI24817.1| novel interferon-inducible GTPase (IIGP) family member [Mus musculus] Length = 844 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 14/134 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P IA +G + GKSS IN L ++ + G + P + + K LP + Sbjct: 480 APLNIAVTGETGTGKSSFINALRGVRDEEEGAAPTGVVETTMKRTP--YPHPK--LPNVT 535 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 + D+PG G P +N YL+E + +I K+ID + ++K Sbjct: 536 IWDLPGIGSTTFPPQN----------YLTEMKFGEYDFFIIISATRFKEIDAHLAKTIEK 585 Query: 148 KAVSYQIVLTKIDK 161 + V TKID+ Sbjct: 586 MNTKFYFVRTKIDQ 599 >gi|116051824|ref|YP_789333.1| GTP-binding protein EngA [Pseudomonas aeruginosa UCBPP-PA14] gi|122260971|sp|Q02RV3|DER_PSEAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|115587045|gb|ABJ13060.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa UCBPP-PA14] Length = 493 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 16/187 (8%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + A T + ++P + N Sbjct: 191 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAG--TTRDSIYIP-----FERN 243 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV + D ++ Sbjct: 244 EEMYTLIDTAGVRRRGKIFEAVEKFS--VVKTLQAIQDANVVIFVMDAREGVVEHDLNLL 301 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 F+ + + I L K D + A+ KT+ R ++ S++ G+ L Sbjct: 302 GFVLETGRALVIALNKWDGME--AAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359 Query: 203 RKAILET 209 K++ E+ Sbjct: 360 YKSVQES 366 >gi|156082555|ref|XP_001608762.1| tRNA modification GTPase TrmE [Babesia bovis T2Bo] gi|154796011|gb|EDO05194.1| tRNA modification GTPase TrmE , putative [Babesia bovis] Length = 529 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 20/169 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAMAL 88 +A G N GKSSLIN + +R N+A ++ PG T+ H + D + +K L A Sbjct: 276 VAIVGPPNAGKSSLINTICDR-NVAIVADLPGTTRDPVHAKY----DLNGIKITLVDTAG 330 Query: 89 VDMPGYGYARAPKKNVDSWG-GLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 + + + V+ G + + Y+ + + V L D H + + + Sbjct: 331 IRIVESETTENSHQKVEMQGIEMALEYIKD---AKVVLFLYD--HDNDDMSKYALTMTMN 385 Query: 148 KAVSYQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K ++ + ++K D L Q + K K +NYP ++ EVIP S+ Sbjct: 386 KMSTHSKLIVCISKTDLLENKKTQAIIRKLK---KNYPLSNAEVIPLST 431 >gi|197334668|ref|YP_002156885.1| GTP-binding protein Era [Vibrio fischeri MJ11] gi|197316158|gb|ACH65605.1| GTP-binding protein Era [Vibrio fischeri MJ11] Length = 322 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 28/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D + A+ VD Sbjct: 31 IAIVGRPNVGKSTLLNQILGQK-ISITSRKPQTTRHRIMGVDTD-----GDYQAI-YVDT 83 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V L+D H D+ V + L K Sbjct: 84 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVLFLVDGTHWTPD-DEMVLNKLKKSEF 137 Query: 151 SYQIVLTKIDKLSP-----TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +++ K+D + T QE EK ++ +V+P S+ ++V+ K Sbjct: 138 PTVLLVNKVDNVKDKKDVMTHLQEMTEKMDFV---------DVVPISAKTGSNVDVVHKL 188 Query: 206 ILETI 210 + E + Sbjct: 189 VREHL 193 >gi|47568683|ref|ZP_00239380.1| tRNA modification GTPase TrmE [Bacillus cereus G9241] gi|228988713|ref|ZP_04148798.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|47554671|gb|EAL13025.1| tRNA modification GTPase TrmE [Bacillus cereus G9241] gi|228771025|gb|EEM19506.1| tRNA modification GTPase mnmE [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 458 Score = 38.9 bits (89), Expect = 0.50, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDVVERIG--VERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D + +E + VI TS ++ +GI+ L AI Sbjct: 330 IVIVNKTDLPQAIDMERVIELAE---------GNRVITTSLIEEQGIDELETAI 374 >gi|269216965|ref|ZP_06160819.1| GTP-binding protein [Slackia exigua ATCC 700122] gi|269129772|gb|EEZ60856.1| GTP-binding protein [Slackia exigua ATCC 700122] Length = 403 Score = 38.9 bits (89), Expect = 0.51, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 14/142 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G N GKSSL+N +V ++LA S G T P + L + ++D Sbjct: 14 IGFFGACNAGKSSLVNAVVG-QDLAVVSEVAGTTTD-----PVRKAMELAPLGPVLIIDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + G L VR + L+ D G+ D+ + +++ V Sbjct: 68 PGM-------DDEGELGALRVRKARRVLDSTDAAVLVADSVTGLSDADRTLVGLFEERGV 120 Query: 151 SYQIVLTKIDKLSPTTAQETLE 172 Y IV+ K D + + +LE Sbjct: 121 PYAIVMGKCDLVGEQEPKMSLE 142 >gi|15598994|ref|NP_252488.1| GTP-binding protein EngA [Pseudomonas aeruginosa PAO1] gi|107103319|ref|ZP_01367237.1| hypothetical protein PaerPA_01004388 [Pseudomonas aeruginosa PACS2] gi|152985588|ref|YP_001346699.1| GTP-binding protein EngA [Pseudomonas aeruginosa PA7] gi|254236703|ref|ZP_04930026.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254242490|ref|ZP_04935812.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|313109217|ref|ZP_07795185.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa 39016] gi|26006739|sp|Q9HXJ8|DER_PSEAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225840|sp|A6V0W4|DER_PSEA7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|9949972|gb|AAG07186.1|AE004798_9 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126168634|gb|EAZ54145.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126195868|gb|EAZ59931.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|150960746|gb|ABR82771.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] gi|310881687|gb|EFQ40281.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa 39016] Length = 493 Score = 38.9 bits (89), Expect = 0.51, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 16/187 (8%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + A T + ++P + N Sbjct: 191 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAG--TTRDSIYIP-----FERN 243 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV + D ++ Sbjct: 244 EEKYTLIDTAGVRRRGKIFEAVEKFS--VVKTLQAIQDANVVIFVMDAREGVVEHDLNLL 301 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 F+ + + I L K D + A+ KT+ R ++ S++ G+ L Sbjct: 302 GFVLETGRALVIALNKWDGME--AAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359 Query: 203 RKAILET 209 K++ E+ Sbjct: 360 YKSVQES 366 >gi|326429422|gb|EGD74992.1| hypothetical protein PTSG_07215 [Salpingoeca sp. ATCC 50818] Length = 412 Score = 38.9 bits (89), Expect = 0.51, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 59/161 (36%), Gaps = 38/161 (23%) Query: 36 GRSNVGKSSLINILVNRK----------NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 GRS +GKS+ +N L + AR + + + + D Sbjct: 31 GRSGLGKSTFVNTLFSTDIYEEDKPYPPPCARIPSTTSVQESVTTLIENDVQ------LT 84 Query: 86 MALVDMPGYGYARAPKKNVDSW-------GGLIVRYLSERSTLR-----------CVYLL 127 + LVD PG+G N D W +Y E S + C+Y L Sbjct: 85 LTLVDTPGFGNG---INNTDCWVPIEEYVDNAFSKYEGEESKISRTDIRDCRVHCCLYFL 141 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 C HGV+ +D +V L K V+ V+ K D L+ Q Sbjct: 142 TPCIHGVRPLDIEVMKRLHTK-VNIIPVIAKADSLTVDECQ 181 >gi|309798864|ref|ZP_07693125.1| GTP-binding protein EngA [Streptococcus infantis SK1302] gi|308117513|gb|EFO54928.1| GTP-binding protein EngA [Streptococcus infantis SK1302] Length = 436 Score = 38.9 bits (89), Expect = 0.51, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 19/160 (11%) Query: 24 LPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 + + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 167 IEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDADG 222 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 ++D G + +N + + ++R + V ++++ G+++ D+ + Sbjct: 223 Q--EFTMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVLNAEEGIREYDKRI 278 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++N+ Sbjct: 279 AGFAHEAGKGMIIVVNKWD---------TLEKDNHTMKNW 309 >gi|281211856|gb|EFA86018.1| guanine nucleotide binding protein 1 [Polysphondylium pallidum PN500] Length = 788 Score = 38.9 bits (89), Expect = 0.51, Method: Compositional matrix adjust. Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 24/111 (21%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + G NVGKSSLIN L+ RK + TS PG T+H F+ + + L D Sbjct: 450 VGMVGHPNVGKSSLINGLMGRK-VVSTSRTPGHTKHFQTIFLTSE----------IRLCD 498 Query: 91 MPGYGYARAPK-KNVDSWGGLI-----------VRYLSERSTLRCVYLLID 129 PG + + K++ GL +RYL+ER + VY L + Sbjct: 499 CPGLVFPALDRPKSLQILCGLFPIAQVREPFSAIRYLAERVAVEKVYGLTN 549 >gi|57168525|ref|ZP_00367658.1| GTPase [Campylobacter coli RM2228] gi|305432942|ref|ZP_07402100.1| ribosome-associated GTPase EngA [Campylobacter coli JV20] gi|57020030|gb|EAL56707.1| GTPase [Campylobacter coli RM2228] gi|304444096|gb|EFM36751.1| ribosome-associated GTPase EngA [Campylobacter coli JV20] Length = 460 Score = 38.9 bits (89), Expect = 0.51, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 22/183 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N LV ++ +S A +N V KD + VD Sbjct: 198 VGIVGRVNVGKSSLLNALVKQERSVVSSIAGTTIDPVNESIVYKD--------KVIEFVD 249 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + ++ + + R S + L++D G ++D+ + K + Sbjct: 250 TAGI-RKRGKIQGLERFA--LNRTEKILSNSQIALLVLDANEGFNELDERIAGLAAKHYL 306 Query: 151 SYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IVL K DK + L++ K+L A+ V+ S++ K + VL + I Sbjct: 307 GVIIVLNKWDKTEFEFDKVVKELKLDRFKFL------AYAPVVSVSALSGKRVHVLLEKI 360 Query: 207 LET 209 LE Sbjct: 361 LEV 363 >gi|317011055|gb|ADU84802.1| GTP-binding protein EngA [Helicobacter pylori SouthAfrica7] Length = 460 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 200 QVGIIGRVNVGKSSLLNAL-TKKERSIVSSVAGTT-----IDPIDETILIGD-QKICFVD 252 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 253 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 309 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P + K K+ Y VI TS +K + IE ++ I+E Sbjct: 310 GIILILNKWDIRYAPYEEIMAVLKRKFRFLEYAP----VITTSCLKTRHIEEIKHKIIE 364 >gi|288941004|ref|YP_003443244.1| ribosome-associated GTPase EngA [Allochromatium vinosum DSM 180] gi|288896376|gb|ADC62212.1| ribosome-associated GTPase EngA [Allochromatium vinosum DSM 180] Length = 467 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 32/148 (21%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV----PKDFSNLKNNLPA 85 P I GR NVGKS+L N L ++ A ++ PG T+ + + P+ + Sbjct: 3 PVITLIGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRQYGIGRIGPRPY--------- 52 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLIDCRHGVKQIDQ 139 +VD G G A + G + L ER R V ++D R G D Sbjct: 53 -VIVDTGGIGTA--------AEG---IEALMERQVQRAVEEADHLLFMVDTRDGCTPEDI 100 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTA 167 D+ L + +V+ K D + PT A Sbjct: 101 DIAQRLRRLGKPITLVVNKSDTMDPTLA 128 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 7/134 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR N GKS+LIN L+ + T ++PG T+ + F+P F ++ L+D Sbjct: 179 KVAVVGRPNAGKSTLINRLLGEERQV-TFDSPGTTRD-SIFIP--FERPGHD-QRYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + +++ L + L+ID G+ + D + + + Sbjct: 234 TAGLRRRARVHDPIEKFS--VIKTLQAIEEANVIILVIDAHEGIGEQDATLAGHIIESGR 291 Query: 151 SYQIVLTKIDKLSP 164 + + + K D L P Sbjct: 292 ALVVAINKWDGLDP 305 >gi|209523770|ref|ZP_03272323.1| GTP-binding protein HSR1-related [Arthrospira maxima CS-328] gi|209495802|gb|EDZ96104.1| GTP-binding protein HSR1-related [Arthrospira maxima CS-328] Length = 639 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 35/162 (21%) Query: 23 LLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAPG--RTQHLNFFV 72 ++ +A PPE I GR+ GKSSLIN L + NLA P R ++ ++ Sbjct: 282 IISQADPPEKVEQKPVSILLVGRTGSGKSSLINTLF-QANLAEVDVLPSTDRIKNYHWST 340 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 P S + L D PGY + ++++ L+V SE T + L+ Sbjct: 341 PTGES--------LNLWDTPGYEQVK--REDLRE---LVV---SEAQTADLLLLVTPALD 384 Query: 133 GVKQIDQDVFSFL-----DKKAVSYQIVLTKIDKLSPTTAQE 169 Q+D+D + D KA++ ++T++D+L P E Sbjct: 385 PALQMDRDFLQDMRVEVPDLKAIA---IVTQVDRLRPVREWE 423 >gi|242091397|ref|XP_002441531.1| hypothetical protein SORBIDRAFT_09g028770 [Sorghum bicolor] gi|241946816|gb|EES19961.1| hypothetical protein SORBIDRAFT_09g028770 [Sorghum bicolor] Length = 459 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 24/184 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G+ NVGKS+LIN +V +K L+ ++ P T+H L ++ + L Sbjct: 123 VAVLGKPNVGKSTLINQMVGQK-LSIVTDKPQTTRHRILGICSEPEYQ--------IILY 173 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG KK + ++++ + S + CV ++ D ++ID+ + + K Sbjct: 174 DTPG-----VIKKEMHKLDSMMMKNVRSAIGSADCVLVVADACKAPEKIDEMLEEGVGNK 228 Query: 149 AVSYQI--VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ + VL K D + P + LE + T +VIP S+ G++ +++ I Sbjct: 229 DIALPVLLVLNKKDLIKPGEIAKKLEWYQKF-----TNVDDVIPISAKFGNGVDDIKEWI 283 Query: 207 LETI 210 L + Sbjct: 284 LSKL 287 >gi|300361843|ref|ZP_07058020.1| GTP-binding protein Era [Lactobacillus gasseri JV-V03] gi|300354462|gb|EFJ70333.1| GTP-binding protein Era [Lactobacillus gasseri JV-V03] Length = 303 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 18/175 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A S P T++ K ++ + +D Sbjct: 13 VALIGRPNVGKSTLLNFLVGQK-VAIMSPQPQTTRN------KISGIYTDDQEQIVFIDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK +D + + S + V +++ K DQ + L K Sbjct: 66 PG---VHKPKNKLDDF--MDKSSYSALDEVDVVLFMVEPEPAGKG-DQYIAELLKKIKKP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KIDK+ P ++ K L E++P S+ + + L K I Sbjct: 120 VFLVINKIDKVHPDKLLSIIDSYKNL-----GDFAEIVPISASQGNNVSELIKTI 169 >gi|53804478|ref|YP_113919.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath] gi|53758239|gb|AAU92530.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath] Length = 293 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 30/183 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ S P T+H + D + VD Sbjct: 6 VALVGRPNVGKSTLLNHLLGQK-LSIVSRRPQTTRHRILGIKTDGRG------QVIYVDT 58 Query: 92 PG-YGYARAPKKNVDSWGGLIVRYLSERST-----LRCVYLLIDCRHGVKQIDQDVFSFL 145 PG +G AR RYL+ + + + L+D R G D+ V + + Sbjct: 59 PGIHGGARRAMN----------RYLNRTAISSLLGVDVILWLVD-RAGWLPDDELVMARI 107 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPTSSVKRKGIEVLRK 204 + + +V+ K+D++ ++TL +L T E++P S++K + VL + Sbjct: 108 KEAKLPVILVINKVDRIE---GKDTL--LPFLAEANATGLFSEIVPISALKGINLAVLEE 162 Query: 205 AIL 207 +L Sbjct: 163 RVL 165 >gi|58581479|ref|YP_200495.1| GTP-binding protein Era [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623409|ref|YP_450781.1| GTP-binding protein Era [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|81311900|sp|Q5H1R1|ERA_XANOR RecName: Full=GTPase Era gi|123522358|sp|Q2P4M0|ERA_XANOM RecName: Full=GTPase Era gi|58426073|gb|AAW75110.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367349|dbj|BAE68507.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 299 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 +A GR NVGKS+L N LV K ++ SN P T+H + P + LV Sbjct: 13 VAVIGRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIA--------TFPEGQLVLV 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF--LDK 147 D PG R K+ ++ V + R +L V + + ++D +F L Sbjct: 64 DTPGL--HREQKRAMNR-----VMNRAARGSLEGVDAAVLVIEAGRWDEEDTLAFRVLSD 116 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V +V+ K+D+L TA R + HP S++KRKG+E L +L Sbjct: 117 AEVPVVLVVNKVDRLKDKTALLPFLAQVSEGRTFAAVHP----VSALKRKGLEALVGDLL 172 Query: 208 ETI 210 + + Sbjct: 173 KLV 175 >gi|323499982|ref|ZP_08104938.1| GTPase Era [Vibrio sinaloensis DSM 21326] gi|323314948|gb|EGA68003.1| GTPase Era [Vibrio sinaloensis DSM 21326] Length = 325 Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H V + + + A+ VD Sbjct: 34 VAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGV-----DTEGDYQAI-YVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V+ L+D H D+ V + L K Sbjct: 87 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVFFLVDGTHWTND-DEMVLTKLQKSNF 140 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D + +E +K + +V+P S+ K I+VLRK + Sbjct: 141 PVVLCVNKVDNVQDRNDVMLHMMEMSKKM------DFVDVVPISAKHGKNIDVLRKHV 192 >gi|296387686|ref|ZP_06877161.1| GTP-binding protein EngA [Pseudomonas aeruginosa PAb1] Length = 493 Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 16/187 (8%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + A T + ++P + N Sbjct: 191 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAG--TTRDSIYIP-----FERN 243 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV + D ++ Sbjct: 244 EEKYTLIDTAGVRRRGKIFEAVEKFS--VVKTLQAIQDANVVIFVMDAREGVVEHDLNLL 301 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 F+ + + I L K D + A+ KT+ R ++ S++ G+ L Sbjct: 302 GFVLETGRALVIALNKWDGME--AAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359 Query: 203 RKAILET 209 K++ E+ Sbjct: 360 YKSVQES 366 >gi|169825321|ref|YP_001692932.1| tRNA modification GTPase [Finegoldia magna ATCC 29328] gi|205829141|sp|B0S3V2|MNME_FINM2 RecName: Full=tRNA modification GTPase mnmE gi|167832126|dbj|BAG09042.1| tRNA modification GTPase [Finegoldia magna ATCC 29328] Length = 452 Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 30/178 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVDMPGY 94 G+ NVGKSSL+N L+ ++N A ++ PG T+ + ++ D +LK N D G Sbjct: 224 GKPNVGKSSLLNALL-KENRAIVTDIPGTTRDVIEEYIDLDGISLKIN-------DTAGI 275 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQ 153 R + V+ G + + +S S + + D D+ + + DKK++ Sbjct: 276 ---RDTEDIVEKIG--VEKSVSFISDSDLIIAIFDSSREFDDEDRKILDLIRDKKSI--- 327 Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++L KID E LE EVI TS +GIE L I+E N Sbjct: 328 VLLNKIDLDGEFDVDENLEGI------------EVIHTSIKNNEGIEDLENKIIEMFN 373 >gi|91977123|ref|YP_569782.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB5] gi|91683579|gb|ABE39881.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB5] Length = 307 Score = 38.9 bits (89), Expect = 0.53, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 74/181 (40%), Gaps = 29/181 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V + S + LVD Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGGSQI-------VLVDT 69 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG APK+ +D +W G + + L CV L+D R G+ + + +F L Sbjct: 70 PGI---FAPKRRLDRAMVKTAWTG------AHDADLVCV--LLDARSGLDEEAETIFGNL 118 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V+ KID L P L +T N E S++ G++ LR+ Sbjct: 119 ANVGHPKVLVINKID-LVPREKLLALTQTA----NQRLHFDETFMVSALSGDGVDDLRRG 173 Query: 206 I 206 + Sbjct: 174 L 174 >gi|242001050|ref|XP_002435168.1| septin, putative [Ixodes scapularis] gi|215498498|gb|EEC07992.1| septin, putative [Ixodes scapularis] Length = 426 Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 22/151 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP-AMALVDMPGY 94 G + VGKS+L+ L NR T+ +P ++ PK F ++N+ + +VD GY Sbjct: 54 GETGVGKSTLMESLFNRS--FETAPSPHNLANV-VLKPKTFELEESNVRLKLTIVDTVGY 110 Query: 95 G----YARAPKKNVDSWGGLIVRYLSERSTLR-------------CVYLLIDCRHGVKQI 137 G + K VD YL E +R C+Y + HG+K I Sbjct: 111 GDQINKEDSFKAIVDYINSQFENYLQEELKIRRCLATYHDTRIHACLYFICPTGHGLKSI 170 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 D LD K V+ ++ K D +S T Q Sbjct: 171 DLVCMKKLDSK-VNIIPIIAKADTISKTELQ 200 >gi|215482646|ref|YP_002324840.1| GTP-binding protein Era [Acinetobacter baumannii AB307-0294] gi|213986558|gb|ACJ56857.1| GTP-binding protein Era [Acinetobacter baumannii AB307-0294] Length = 301 Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 1 MAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 53 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L +ID H Q D V L Sbjct: 54 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDA-HKWTQNDDLVLEKLKNA 105 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 106 DMPVILVINKADTFGDKREILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEK 161 Query: 209 TINY 212 + Y Sbjct: 162 YLPY 165 >gi|18490083|gb|AAH22776.1| OTTMUSG00000005523 protein [Mus musculus] Length = 835 Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 22/138 (15%) Query: 28 GPPEIAFSGRSNVGKSSLINIL----VNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P IA +G + GKSS IN L K+ A T + + PK L Sbjct: 471 APLNIAVTGETGTGKSSFINALRGISSEEKDAAPTGVIETTMKRTPYPHPK--------L 522 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + + D+PG G P +N YL+E + +I K+ID + Sbjct: 523 PNVTIWDLPGIGSTNFPPQN----------YLTEMKFGEYDFFIIISATRFKEIDAHLAK 572 Query: 144 FLDKKAVSYQIVLTKIDK 161 + K + V TKID+ Sbjct: 573 AIAKMNTKFYFVRTKIDQ 590 >gi|295100047|emb|CBK89136.1| Predicted GTPase [Eubacterium cylindroides T2-87] Length = 446 Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 20/147 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP I GR+ VGKSSLIN L +A S+ T+ + KD + M + Sbjct: 63 PPRIFLIGRTGVGKSSLINALCG-AYVAGVSDTKSCTEGAQIYECKDGDRV-----LMEI 116 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V + +++ ++E S +++L +C H ++ DV FL K Sbjct: 117 LDTRGIAESESLDDKV-TAEEMLIEQINEFSPDVAIFML-NCTHR-DDVNTDV-EFLKKV 172 Query: 149 AVSYQ----------IVLTKIDKLSPT 165 + Y +V+ K D+++P+ Sbjct: 173 SKEYAKVNKLQLPIVVVINKCDEMAPS 199 >gi|224826993|ref|ZP_03700091.1| GTP-binding protein HSR1-related [Lutiella nitroferrum 2002] gi|224600826|gb|EEG07011.1| GTP-binding protein HSR1-related [Lutiella nitroferrum 2002] Length = 311 Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 17/92 (18%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P G L K P + G NVGKS+LIN L R+ +A+T N PG T+ + DF Sbjct: 105 APNRGGLEK--PLRVLICGIPNVGKSTLINSLAGRR-IAKTGNEPGITKGQQRILLADDF 161 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWG 108 LVD PG + PK V+ G Sbjct: 162 E----------LVDTPGMLW---PKIEVEEGG 180 >gi|16081154|ref|NP_391982.1| tRNA modification GTPase TrmE [Bacillus subtilis subsp. subtilis str. 168] gi|221312085|ref|ZP_03593932.1| tRNA modification GTPase TrmE [Bacillus subtilis subsp. subtilis str. 168] gi|221316410|ref|ZP_03598215.1| tRNA modification GTPase TrmE [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321323|ref|ZP_03602617.1| tRNA modification GTPase TrmE [Bacillus subtilis subsp. subtilis str. JH642] gi|221325606|ref|ZP_03606900.1| tRNA modification GTPase TrmE [Bacillus subtilis subsp. subtilis str. SMY] gi|135725|sp|P25811|MNME_BACSU RecName: Full=tRNA modification GTPase mnmE gi|40025|emb|CAA44403.1| unnamed protein product [Bacillus subtilis] gi|467386|dbj|BAA05232.1| thiophen and furan oxidation [Bacillus subtilis] gi|2636649|emb|CAB16139.1| tRNA modification GTPase [Bacillus subtilis subsp. subtilis str. 168] Length = 459 Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 228 GRPNVGKSSLLNSLVHEAK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L +L+ + + ++DV F + + ++ Sbjct: 280 --RETEDIVERIGVERSRQVLKEADL----ILLVLNYSEELSEEDVKLFEAVEGMDVIVI 333 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L K D L P E +R P V+ TS +K +GI L +AI Sbjct: 334 LNKTD-LEPKIDTER-------VRELANGRP-VVTTSLLKEEGINDLEEAI 375 >gi|260221255|emb|CBA29636.1| GTP-binding protein engA [Curvibacter putative symbiont of Hydra magnipapillata] Length = 445 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 17/182 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A +GR NVGKS+LIN + + L + PG T+ VP + K LVD Sbjct: 181 KLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDA-ISVPFEREGQK-----FELVD 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L + V LLID GV D + ++ + Sbjct: 234 TAGLRKKGKVFEAIEKFS--VVKTLQAIESASVVLLLIDAEQGVTDQDAHIAGYILESGR 291 Query: 151 SYQIVLTK---IDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K ID+ + +LE T+ + H S+ KR+G+ L AI Sbjct: 292 AVVVAVNKWDAIDEYQRELVKRSLE-TRLGFLKFAALH----LISAKKRQGLGPLWGAIA 346 Query: 208 ET 209 + Sbjct: 347 QA 348 >gi|255690104|ref|ZP_05413779.1| tRNA modification GTPase TrmE [Bacteroides finegoldii DSM 17565] gi|260624386|gb|EEX47257.1| tRNA modification GTPase TrmE [Bacteroides finegoldii DSM 17565] Length = 466 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 32/195 (16%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K+G P +A G +N GKS+L+N+L+N ++ A S+ G T+ V +D ++ Sbjct: 214 VGNAIKSGVP-VAIIGETNAGKSTLLNVLLN-EDKAIVSDIHGTTRD----VIEDTISIG 267 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V ++D + QI+Q Sbjct: 268 G--VTFRFIDTAGI---RETNDKIESLG--IERTFQKLEQAEIVLWMVDSVNAASQIEQ- 319 Query: 141 VFSFLDKKAV------SYQIVLTKIDKLSPTTAQETLEKTKY--LIRNYPTAHPEVIPTS 192 L KK + +V K D + E ++K+ L+ N+P E I S Sbjct: 320 ----LSKKIIPRCEGKHLIVVFNKADLI------EDVQKSNLSALLENFPQESTEHIYIS 369 Query: 193 SVKRKGIEVLRKAIL 207 + +R+ L+K ++ Sbjct: 370 AKRRENTNELQKMLI 384 >gi|149926362|ref|ZP_01914623.1| GTP-binding protein EngA [Limnobacter sp. MED105] gi|149824725|gb|EDM83939.1| GTP-binding protein EngA [Limnobacter sp. MED105] Length = 441 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 19/183 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A +GR NVGKS+++N L+ + + + PG T+ + DF +N+ P L+D Sbjct: 177 KVAIAGRPNVGKSTMVNTLLGEERVI-AFDLPGTTRDSIYI---DFE--RNDKP-YTLID 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++V+ + +++ L V L++D + + D + F+ + Sbjct: 230 TAGLRKRGKVFESVEKFS--VIKTLQAIEDANVVILMLDAQQDISDQDASIAGFIVEAGR 287 Query: 151 SYQIVLTKIDKLSPTTAQ----ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S + + K D L + E K +L NY H S+ K GI + K++ Sbjct: 288 SLVLAVNKWDSLDDYRKERIKAEVGRKLTFL--NYAKFH----YVSATKPFGIAAMMKSV 341 Query: 207 LET 209 E Sbjct: 342 DEA 344 >gi|328869018|gb|EGG17396.1| GTP-binding protein engA [Dictyostelium fasciculatum] Length = 770 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 12/174 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P IA G+ NVGKS+L N +V + A + PG T+ + + Sbjct: 116 GKPLIALVGKPNVGKSTLFNRIVESQRQALVEDIPGTTRDRYYGEAIVYGK------QFQ 169 Query: 88 LVDMPGYGYARAPKKNVDSWGGLI-VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VD G ++ D + +I + + ++D R G+ Q+D+D+ L Sbjct: 170 VVDTGGMVGDSTTQQ--DQFSQMIKTQATIAMDEADVIVFVVDYRTGITQVDRDLARMLR 227 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLE-KTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + Q VL +K E E K + + P P SS+ G+ Sbjct: 228 NRQQKGQHVLVVANKADSHMMIEGFETDMKTTLTRFGLGEP--FPMSSIHGHGV 279 >gi|326794518|ref|YP_004312338.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1] gi|326545282|gb|ADZ90502.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1] Length = 445 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 12/138 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + K ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKSRD-ALVADYPGLTR------DRKYGDGKLGEHDFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ +D + + L V L+D RHG+ D+ + + L + + Sbjct: 56 DTGGI---TGDEQGIDEK--MASQSLQAIEEADAVLFLVDGRHGLNPADEMIANHLRRSS 110 Query: 150 VSYQIVLTKIDKLSPTTA 167 +V+ K D ++ A Sbjct: 111 KPTYLVVNKTDGINEDIA 128 >gi|182414655|ref|YP_001819721.1| small GTP-binding protein [Opitutus terrae PB90-1] gi|177841869|gb|ACB76121.1| small GTP-binding protein [Opitutus terrae PB90-1] Length = 501 Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 55/132 (41%), Gaps = 4/132 (3%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + F GR NVGKSSL N L+ L S PG T+ +P +F L Sbjct: 179 PLGVCFIGRPNVGKSSLSNRLLQSDRLI-VSEVPGTTRDA-IELPFEFIGRDGKSYPFRL 236 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G A V+ + L R L V+L++D GV Q D+ + K+ Sbjct: 237 IDTAGIKAATKLASPVEYFSRL--RSLDAIKETDVVFLVLDALEGVTQQDKAIAGEAVKE 294 Query: 149 AVSYQIVLTKID 160 +V+ K D Sbjct: 295 HKPIVLVVNKWD 306 >gi|307265442|ref|ZP_07546998.1| tRNA modification GTPase TrmE [Thermoanaerobacter wiegelii Rt8.B1] gi|306919556|gb|EFN49774.1| tRNA modification GTPase TrmE [Thermoanaerobacter wiegelii Rt8.B1] Length = 462 Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 228 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 280 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 281 GI---RDTDELVEKIG--VAKSKEVLAEADLILFVLDASRELTKEDYEIFDILVGKNIVF 335 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E TK I +I S+V++ G++ L I Sbjct: 336 --VLNKIDLPKKIDEKELKNLTKDGI---------IIEVSTVEKIGLQELEDTI 378 >gi|303232238|ref|ZP_07318937.1| GTP-binding protein Era [Atopobium vaginae PB189-T1-4] gi|302481648|gb|EFL44709.1| GTP-binding protein Era [Atopobium vaginae PB189-T1-4] Length = 306 Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust. Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 15/148 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR +VGKS+L+N K + A + L + D S + LVD Sbjct: 17 VALVGRPSVGKSTLLNACYGGKIAITSKVAQTTRKRLRAVITSDTSQI-------ILVDT 69 Query: 92 PGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG K D+ G + + L E + + V LL+D + + D V + + Sbjct: 70 PGL------HKPQDALGKTLNQTALLELNDVEVVALLVDATAPIGRGDMWVAKHVHASSA 123 Query: 151 SYQI-VLTKIDKLSPTTAQETLEKTKYL 177 +Y+I VLTK DK + + LE + L Sbjct: 124 AYKILVLTKADKATQAQVKAQLEASSML 151 >gi|209694322|ref|YP_002262250.1| GTP-binding protein EngA [Aliivibrio salmonicida LFI1238] gi|238058970|sp|B6EGZ1|DER_ALISL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|208008273|emb|CAQ78418.1| GTP-binding protein [Aliivibrio salmonicida LFI1238] Length = 500 Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 13/147 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+LIN ++ + + + PG T+ + ++P ++ L Sbjct: 210 PIKLAIIGRPNVGKSTLINRILGEERVV-VYDMPGTTRD-SIYIP-----MEREGQEYVL 262 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L+ID R + D + F Sbjct: 263 IDTAGVRRRGRINETVEKFS--VIKTLKAIEDANVVLLVIDARENISDQDLSLLGFALNA 320 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTK 175 S I + K D L+ E EK K Sbjct: 321 GRSLVIAVNKWDGLN----NEVKEKVK 343 >gi|167036672|ref|YP_001664250.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115099|ref|YP_004185258.1| small GTP-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855506|gb|ABY93914.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928190|gb|ADV78875.1| small GTP-binding protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 408 Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 34/188 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 IA GR N GKSSLIN L N++ +A S+ G T S LP + ++ Sbjct: 12 IAIFGRRNAGKSSLINALTNQE-VALVSDVAGTTTD-------PVSKAMEILPIGPVVII 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G + G L V+ E R+ L L+ID G+ + +++V + Sbjct: 64 DTAGL-------DDTGELGELRVKKTYEVLNRTDL--AILVIDGTIGLSEFEENVLKIIR 114 Query: 147 KKAVSYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 K + V+ K D + S ++ EK K E+I S++K+ GIE L+ Sbjct: 115 DKNIPVVGVINKKDLSQYSEEDKRKWEEKLKL----------ELIEVSALKKHGIEALKM 164 Query: 205 AILETINY 212 +++ Y Sbjct: 165 MLIKKAPY 172 >gi|218248879|ref|YP_002374250.1| tRNA modification GTPase TrmE [Cyanothece sp. PCC 8801] gi|218169357|gb|ACK68094.1| tRNA modification GTPase TrmE [Cyanothece sp. PCC 8801] Length = 460 Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ + + + +P + ++D Sbjct: 228 VAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDV-----VESQLIVGGIP-IQVLDT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G R+++ ++ L V L ID + G D+ ++ + + + Sbjct: 281 AGI---RETADRVEKLGVERSRHVASQADL--VLLTIDAQMGWTTEDEAIYQQVQHRPLI 335 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID L + + + K +++ T + + +GIE L KAIL ++ Sbjct: 336 --LVINKID-LGLADSLSFIPQIK-----------QIVKTVAAQNQGIEQLEKAILASVE 381 >gi|167039341|ref|YP_001662326.1| small GTP-binding protein [Thermoanaerobacter sp. X514] gi|256752341|ref|ZP_05493202.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1] gi|300913981|ref|ZP_07131298.1| small GTP-binding protein [Thermoanaerobacter sp. X561] gi|307725336|ref|YP_003905087.1| small GTP-binding protein [Thermoanaerobacter sp. X513] gi|166853581|gb|ABY91990.1| small GTP-binding protein [Thermoanaerobacter sp. X514] gi|256748752|gb|EEU61795.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1] gi|300890666|gb|EFK85811.1| small GTP-binding protein [Thermoanaerobacter sp. X561] gi|307582397|gb|ADN55796.1| small GTP-binding protein [Thermoanaerobacter sp. X513] Length = 408 Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust. Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 34/188 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 IA GR N GKSSLIN L N++ +A S+ G T S LP + ++ Sbjct: 12 IAIFGRRNAGKSSLINALTNQE-VALVSDVAGTTTD-------PVSKAMEILPIGPVVII 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G + G L V+ E R+ L L+ID G+ + +++V + Sbjct: 64 DTAGL-------DDTGELGELRVKKTYEVLNRTDL--AILVIDGTIGLSEFEENVLKIIR 114 Query: 147 KKAVSYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 K + V+ K D + S ++ EK K E+I S++K+ GIE L+ Sbjct: 115 DKNIPVVGVINKKDLSQYSEEDKRKWEEKLKL----------ELIEVSALKKHGIEALKM 164 Query: 205 AILETINY 212 +++ Y Sbjct: 165 MLIKKAPY 172 >gi|153937917|ref|YP_001392999.1| tRNA modification GTPase TrmE [Clostridium botulinum F str. Langeland] gi|166200475|sp|A7GJN9|MNME_CLOBL RecName: Full=tRNA modification GTPase mnmE gi|152933813|gb|ABS39311.1| tRNA modification GTPase TrmE [Clostridium botulinum F str. Langeland] Length = 461 Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 22/171 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+N +N A + PG T+ V +++ N+ + +P +VD G Sbjct: 230 GKPNVGKSSLLNALIN-ENKAIVTEIPGTTRD----VIEEYINI-DGIPT-KIVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + + + V ++D + + D ++ F+ K Y ++ Sbjct: 282 --RETEDVVEKIG--VEKSKEKIDEADLVIFMLDLSKKIDEEDIEIMDFIKNK--KYIVL 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L K+D + L + + I+ + + +I TS G+ L++ I Sbjct: 336 LNKLD------LNKDLNEENHFIKELDSKY--IIKTSVKNNSGLNELKECI 378 >gi|323705843|ref|ZP_08117415.1| tRNA modification GTPase TrmE [Thermoanaerobacterium xylanolyticum LX-11] gi|323534839|gb|EGB24618.1| tRNA modification GTPase TrmE [Thermoanaerobacterium xylanolyticum LX-11] Length = 458 Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 28/176 (15%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+N +N A ++ PG T+ + ++ ++K +P + L+D Sbjct: 226 AIIGKPNVGKSSLLNALLN-ENRAIVTDIPGTTRD----IIEEHLSIK-GIP-INLIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G R +++ L + + D +++ D D+ ++ K V Y Sbjct: 279 GI---RQTDEIVERIGVERSREAIDKADL--IMFIFDSSRPLEKDDYDILKLIENKKVLY 333 Query: 153 QIVLTKIDKLSPTTAQET--LEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +L KID S E L KY + SS ++G+++L + Sbjct: 334 --ILNKIDLPSAIDIDEVDKLSGGKY------------VKLSSFTKEGLDILENTV 375 >gi|138897067|ref|YP_001127520.1| tRNA modification GTPase TrmE [Geobacillus thermodenitrificans NG80-2] gi|196249888|ref|ZP_03148584.1| tRNA modification GTPase TrmE [Geobacillus sp. G11MC16] gi|166200479|sp|A4ITX1|MNME_GEOTN RecName: Full=tRNA modification GTPase mnmE gi|134268580|gb|ABO68775.1| Thiophen and furan oxidation [Geobacillus thermodenitrificans NG80-2] gi|196210764|gb|EDY05527.1| tRNA modification GTPase TrmE [Geobacillus sp. G11MC16] Length = 462 Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L + +N A ++ PG T+ V +++ N++ +P + L+D G Sbjct: 231 GRPNVGKSSLLNALAH-ENRAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLIDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + +++ L + L+++ + + D+ +F+ + + ++ Sbjct: 283 --RETEDIVERIGVERSRQMLKKADL--ILLVLNYHEPLTEEDERLFAM--TEGMDVIVI 336 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D P +E+ K L P ++ TS + +GI+ L KAI Sbjct: 337 VNKTD--LPQNID--IERVKELAAGRP-----IVATSLLCERGIDELEKAI 378 >gi|325661996|ref|ZP_08150615.1| GTP-binding protein engA [Lachnospiraceae bacterium 4_1_37FAA] gi|331085846|ref|ZP_08334929.1| GTP-binding protein engA [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471659|gb|EGC74878.1| GTP-binding protein engA [Lachnospiraceae bacterium 4_1_37FAA] gi|330406769|gb|EGG86274.1| GTP-binding protein engA [Lachnospiraceae bacterium 9_1_43BFAA] Length = 442 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 15/147 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN LV +N SN G T+ + + N + Sbjct: 178 PRIAIVGKPNVGKSSIINKLVG-ENRVIVSNIAGTTRDAI------DTEITWNGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDAVEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKY 176 I++ K D A E +KT Y Sbjct: 289 KGVIIIVNKWD------AIEKNDKTMY 309 >gi|59712693|ref|YP_205469.1| GTP-binding protein Era [Vibrio fischeri ES114] gi|59480794|gb|AAW86581.1| membrane-associated, 16S rRNA-binding GTPase [Vibrio fischeri ES114] Length = 321 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 28/183 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D + A+ VD Sbjct: 30 IAIVGRPNVGKSTLLNQILGQK-ISITSRKPQTTRHRIMGVDTD-----GDYQAI-YVDT 82 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V L+D H D+ V + L K Sbjct: 83 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVLFLVDGTHWTPD-DEMVLNKLKKSEF 136 Query: 151 SYQIVLTKIDKLSP-----TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +++ K+D + T QE EK ++ +V+P S+ ++V+ K Sbjct: 137 PTVLLVNKVDNVKDKKDVMTHLQEMTEKMDFV---------DVVPISAKTGSNVDVVHKL 187 Query: 206 ILE 208 + E Sbjct: 188 VRE 190 >gi|78066578|ref|YP_369347.1| GTP-binding protein EngA [Burkholderia sp. 383] gi|123728977|sp|Q39FR3|DER_BURS3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|77967323|gb|ABB08703.1| Small GTP-binding protein [Burkholderia sp. 383] Length = 445 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSP----TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGLDEHARDRAKADLTRKLKFL--DFAKSH----YISAAKKTGIGALMRSV 345 >gi|281418695|ref|ZP_06249714.1| tRNA modification GTPase TrmE [Clostridium thermocellum JW20] gi|281407779|gb|EFB38038.1| tRNA modification GTPase TrmE [Clostridium thermocellum JW20] Length = 459 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 29/176 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L + K+ A ++ PG T+ + +++ N+ N +P + ++D G Sbjct: 228 GKPNVGKSSLLNEL-SGKSKAIVTDIPGTTRD----IIEEYINI-NGIP-LRIIDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R + V+ G + + L V ++ID + G+ + D + + L DKK + I Sbjct: 280 --RETEDVVEKIGVEKTHRAIDEADL--VIMMIDAKRGMDEDDNRILTMLGDKKLI---I 332 Query: 155 VLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ KID + E+L K + IR TS + GI L AI E Sbjct: 333 LINKIDLVDEKQINEIESLLKGRKCIR-----------TSVKEGTGISELENAITE 377 >gi|92117773|ref|YP_577502.1| GTP-binding protein Era [Nitrobacter hamburgensis X14] gi|91800667|gb|ABE63042.1| GTP-binding protein Era [Nitrobacter hamburgensis X14] Length = 305 Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust. Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 29/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V ++NN + LVD Sbjct: 15 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIV------VENN-AQIILVDT 67 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG APK+ +D +W G + + L C L+D R GV + + L Sbjct: 68 PGI---FAPKRRLDRAMVSTAWSG------AHDADLVCA--LLDARAGVDDEADVILTKL 116 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 A +VL KID L P L N A + S++ G++ LR+A Sbjct: 117 AGVAHPKILVLNKID-LVPREKLLALASAA----NGRMAFEDTFMVSALSGDGVDDLRRA 171 Query: 206 ILETI 210 + E + Sbjct: 172 LAERV 176 >gi|260583467|ref|ZP_05851215.1| ribosome-associated GTPase EngA [Granulicatella elegans ATCC 700633] gi|260158093|gb|EEW93161.1| ribosome-associated GTPase EngA [Granulicatella elegans ATCC 700633] Length = 437 Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 8/131 (6%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 +F GR NVGKSSL+N ++ + + SN G T+ + F++ + + M +D Sbjct: 179 SFIGRPNVGKSSLVNAMLGEERVI-VSNVAGTTRDA---IDTSFTDEEGTIFKM--IDTA 232 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G ++ + + L ERS + CV L + G+++ D+ + + + Sbjct: 233 GIRKKGRVFESTEKYSVLRALRAIERSDIVCVVL--NAEEGIQEQDKKIAGYAHEAGKGV 290 Query: 153 QIVLTKIDKLS 163 I++ K D L Sbjct: 291 IILVNKWDTLE 301 >gi|125974850|ref|YP_001038760.1| tRNA modification GTPase TrmE [Clostridium thermocellum ATCC 27405] gi|256003893|ref|ZP_05428880.1| tRNA modification GTPase TrmE [Clostridium thermocellum DSM 2360] gi|205829145|sp|A3DHY8|MNME_CLOTH RecName: Full=tRNA modification GTPase mnmE gi|125715075|gb|ABN53567.1| tRNA modification GTPase trmE [Clostridium thermocellum ATCC 27405] gi|255992231|gb|EEU02326.1| tRNA modification GTPase TrmE [Clostridium thermocellum DSM 2360] gi|316941972|gb|ADU76006.1| tRNA modification GTPase TrmE [Clostridium thermocellum DSM 1313] Length = 459 Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 29/176 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L + K+ A ++ PG T+ + +++ N+ N +P + ++D G Sbjct: 228 GKPNVGKSSLLNEL-SGKSKAIVTDIPGTTRD----IIEEYINI-NGIP-LRIIDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R + V+ G + + L V ++ID + G+ + D + + L DKK + I Sbjct: 280 --RETEDVVEKIGVEKTHRAIDEADL--VIMMIDAKRGMDEDDNRILTMLGDKKLI---I 332 Query: 155 VLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ KID + E+L K + IR TS + GI L AI E Sbjct: 333 LINKIDLVDEKQINEIESLLKGRKCIR-----------TSVKEGTGISELENAITE 377 >gi|313884154|ref|ZP_07817920.1| ribosome biogenesis GTPase Der [Eremococcus coleocola ACS-139-V-Col8] gi|312620601|gb|EFR32024.1| ribosome biogenesis GTPase Der [Eremococcus coleocola ACS-139-V-Col8] Length = 438 Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 12/134 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + +F GR NVGKSSL+N ++ + + SN G T+ D + M ++D Sbjct: 178 KFSFIGRPNVGKSSLVNAVLKEERVI-VSNIEGTTRE-----AVDSKFISETGKEMTVID 231 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G +N + + ++R L+ +RS + C+ L D G++ D+ V + + Sbjct: 232 TAGIRKKGKVYENTEKYS--VMRSLAAIDRSDVVCIVL--DAETGIRDQDKHVAGYAYEA 287 Query: 149 AVSYQIVLTKIDKL 162 IV+ K D L Sbjct: 288 GKGIIIVVNKWDAL 301 >gi|293115597|ref|ZP_05792245.2| ribosome-associated GTPase EngA [Butyrivibrio crossotus DSM 2876] gi|292809015|gb|EFF68220.1| ribosome-associated GTPase EngA [Butyrivibrio crossotus DSM 2876] Length = 446 Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 11/171 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN +V + S+ G T+ + D + N + Sbjct: 183 PRIAIVGKPNVGKSSIINKIVGESRVI-VSDIAGTTRDA---IDTDITYNGNEY---VFI 235 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 236 DTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHERG 293 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +V+ K D + T E + K ++ P A I + +R G Sbjct: 294 KGIIVVVNKWDAIEKNDKTIYEHTNRIKDILSFMPYAEILFISAKTGQRVG 344 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 29/175 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + ++ + PG T+ + D + L N L+ Sbjct: 9 PVVAIVGRPNVGKSTLFNALAGEQ-ISIVKDTPGVTRDRIY---ADVTWLNYNF---TLI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G P+ +I+ + E++ + + ++D R G+ D V + Sbjct: 62 DTGGI----EPESK-----DIILSQMREQAEIAIASADVIIFMVDVRQGLVDSDSKVANM 112 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L + +V+ K+D + + Y N P +P SSV + GI Sbjct: 113 LRRSGKPVVLVVNKVDSF------QKMMTDVYEFYNLGIGDP--VPVSSVGKLGI 159 >gi|159902929|ref|YP_001550273.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9211] gi|226706248|sp|A9BE09|DER_PROM4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|159888105|gb|ABX08319.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str. MIT 9211] Length = 456 Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + + A S+ G T+ + LK A L Sbjct: 177 PIQLAIIGRPNVGKSSLLNSICG-ETRAIVSSIRGTTRDTIDTL------LKREQQAWKL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D G R+ + +G I R L ERS + C+ L+ID GV + DQ + ++ Sbjct: 230 IDTAGIRRRRSVSYGPEYFG--INRSLKAIERSDV-CL-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLSPTT 166 ++ + +V+ K D + T Sbjct: 286 QEGKACLVVVNKWDAVEKDT 305 >gi|134295839|ref|YP_001119574.1| GTP-binding protein EngA [Burkholderia vietnamiensis G4] gi|166224317|sp|A4JEN6|DER_BURVG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|134138996|gb|ABO54739.1| small GTP-binding protein [Burkholderia vietnamiensis G4] Length = 445 Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGLDDHARDRAKADLTRKLKFL--DFAKSH----YISAAKKTGIGALMRSV 345 >gi|299822890|ref|ZP_07054776.1| GTP-binding protein Era [Listeria grayi DSM 20601] gi|299816419|gb|EFI83657.1| GTP-binding protein Era [Listeria grayi DSM 20601] Length = 301 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 23/167 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + D S + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ + + +Y +ID G+ + D+ + L Sbjct: 63 PG---IHKPKHKL---GDFMVKIAFNTFQEVDLIYFVIDASTGLGRGDEFIIEKLKNVDT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVK 195 +++ KID +SP E LI +Y E+IP S+++ Sbjct: 117 PVFLLINKIDLISPDALLE-------LIASYREKMEFTEIIPISALQ 156 >gi|325299810|ref|YP_004259727.1| GTP-binding protein engA [Bacteroides salanitronis DSM 18170] gi|324319363|gb|ADY37254.1| GTP-binding protein engA [Bacteroides salanitronis DSM 18170] Length = 437 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSSLIN V + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSLINAFVGEERNIVTEIAGTTRDSIYTRYDKFGF--DFY------- 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++FS Sbjct: 227 ---LVDTAGIRKKNKVNEDLEYYS--VIRSIRAIENSDVCILMLDATRGIEGQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSVKRKGIEV 201 + + +V+ K D + +A+ ++ + IRN T P + ++ K++ +V Sbjct: 282 IQRNQKGLVVVVNKWDLVEEKSAK-VMKTYETAIRNRLAPFTDFPIIFASALTKQRIFKV 340 Query: 202 LRKA 205 L A Sbjct: 341 LETA 344 >gi|323508123|emb|CBQ67994.1| related to GTP-binding protein [Sporisorium reilianum] Length = 792 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVP 73 I G+ NVGKSSL+N L K + R S PG+T+H +F +P Sbjct: 493 IGLIGQPNVGKSSLLNALFGSK-VVRASKTPGKTKHFQTHFLIP 535 >gi|306829944|ref|ZP_07463131.1| ribosome-associated GTPase EngA [Streptococcus mitis ATCC 6249] gi|304427955|gb|EFM31048.1| ribosome-associated GTPase EngA [Streptococcus mitis ATCC 6249] Length = 436 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 19/160 (11%) Query: 24 LPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 + + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 167 VEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDADG 222 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 ++D G + +N + + ++R + V ++++ G+++ D+ + Sbjct: 223 Q--EFTMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVLNAEEGIREYDKRI 278 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++N+ Sbjct: 279 AGFAHEAGKGMIIVVNKWD---------TLEKDNHTMKNW 309 >gi|172060768|ref|YP_001808420.1| GTP-binding protein EngA [Burkholderia ambifaria MC40-6] gi|238689149|sp|B1YR40|DER_BURA4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|171993285|gb|ACB64204.1| small GTP-binding protein [Burkholderia ambifaria MC40-6] Length = 445 Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGLDDHARDRAKADLTRKLKFL--DFAKSH----YISAAKKTGIGALMRSV 345 >gi|237737098|ref|ZP_04567579.1| GTPase [Fusobacterium mortiferum ATCC 9817] gi|229420960|gb|EEO36007.1| GTPase [Fusobacterium mortiferum ATCC 9817] Length = 268 Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 7/70 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNL--ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 AF G S VGKSS+IN+L N K L TS R +H KD +NL + ++D Sbjct: 135 AFGGPSGVGKSSIINLLQNEKKLETGETSKRLRRGKH----TTKD-TNLLELIGGGYIID 189 Query: 91 MPGYGYARAP 100 PG+ P Sbjct: 190 TPGFSSVELP 199 >gi|193215037|ref|YP_001996236.1| GTP-binding protein EngA [Chloroherpeton thalassium ATCC 35110] gi|238692727|sp|B3QZ96|DER_CHLT3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|193088514|gb|ACF13789.1| small GTP-binding protein [Chloroherpeton thalassium ATCC 35110] Length = 435 Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 24/158 (15%) Query: 16 RGVPE-----IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 RGV E I +P+ PE + GR NVGKSS +N ++ +N ++ PG Sbjct: 151 RGVAELLDAVIAHIPEDDAPESDDTVKLTVIGRPNVGKSSFVNAILG-QNRQIVTDIPGT 209 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC- 123 T+ S K N L+D G N++ + L +E++ RC Sbjct: 210 TRDAV------DSRFKRNGQDFLLIDTAGLRRKAKVDDNIELFSAL----RTEKAIERCD 259 Query: 124 -VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 +L+D G++ D V + +K I + K D Sbjct: 260 VAIILLDATQGLENQDLKVINAAAQKKRGMVIAVNKWD 297 >gi|108710093|gb|ABF97888.1| expressed protein [Oryza sativa Japonica Group] Length = 473 Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV +K TS PG+T+H V + + L D Sbjct: 195 VGFVGYPNVGKSSTINALVGQKRTGVTST-PGKTKHFQTLVISE---------ELILCDC 244 Query: 92 PG 93 PG Sbjct: 245 PG 246 >gi|323703320|ref|ZP_08114970.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574] gi|323531683|gb|EGB21572.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574] Length = 302 Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A S+ P T+H K S L N + +D Sbjct: 13 VALVGRPNVGKSTLLNKLVGQK-VAIMSDKPQTTRH------KIHSVLSRNDAQIVFLDT 65 Query: 92 PG 93 PG Sbjct: 66 PG 67 >gi|295707338|ref|YP_003600413.1| tRNA modification GTPase TrmE [Bacillus megaterium DSM 319] gi|294804997|gb|ADF42063.1| tRNA modification GTPase TrmE [Bacillus megaterium DSM 319] Length = 462 Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 25/172 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 231 GRPNVGKSSLLNSLVQDAK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 R + V+ G R YL E + L+++ + D+ +F + K + + Sbjct: 283 --RETEDIVERIGVERSRQYLKEAD---LILLVLNFNEELTDEDKKLFEAV--KGMDVIV 335 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ K D +E ++ + HP ++ TS ++ +G++ L +AI Sbjct: 336 IVNKTDLEQKINLEE--------VQQFAGDHP-IVTTSLLQEQGVDQLEEAI 378 >gi|269792400|ref|YP_003317304.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100035|gb|ACZ19022.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 443 Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 11/129 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N L+ RK LA + PG T+ + ++ + + LVD Sbjct: 4 VAIVGRPNVGKSSLFNRLIGRK-LAIVEDIPGVTRD------RLYAETEWDGKRFYLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A +P D + L E V L+D + GV D+ + L + + Sbjct: 57 GGIESA-SPHPFQDVIARQVQMALKE---CDVVIFLLDGKEGVTAGDEAIAEMLRRSSKP 112 Query: 152 YQIVLTKID 160 + + KID Sbjct: 113 VIVAMNKID 121 >gi|219685247|ref|ZP_03540067.1| ribosome-associated GTPase EngA [Borrelia garinii Far04] gi|219673343|gb|EED30362.1| ribosome-associated GTPase EngA [Borrelia garinii Far04] Length = 433 Score = 38.5 bits (88), Expect = 0.61, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF--SNLKNNLPAMAL 88 ++ G+ N GKS+LIN L + ++ S+ PG T +DF + L N + Sbjct: 175 KVGIIGKPNSGKSTLINYLSGNE-ISIVSDQPGTT--------RDFIKTKLTRNGKVFEI 225 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + I R L + V+LLID + + D+ + ++ KK Sbjct: 226 IDTAGIRRRARVNEVVEYYS--INRALKVIDMVDIVFLLIDVKEELTSQDKKIAHYVTKK 283 Query: 149 AVSYQIVLTKIDKLSPTTAQ-ETLE-KTKYLIRNYPTAHPEVIPTSSVKRK-GIEVLRKA 205 IV +K D L + ETL+ + K+ +P + I SV +K G++ L K Sbjct: 284 GKGIIIVFSKWDLLEESKGYFETLKGRVKFF---FPVLNFAPIFRISVHKKMGLDSLFKE 340 Query: 206 ILE 208 L+ Sbjct: 341 ALK 343 >gi|284050988|ref|ZP_06381198.1| small GTP-binding protein domain-containing protein [Arthrospira platensis str. Paraca] gi|291569595|dbj|BAI91867.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 639 Score = 38.5 bits (88), Expect = 0.61, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 35/157 (22%) Query: 23 LLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAPG--RTQHLNFFV 72 ++ +A PPE I GR+ GKSSLIN L + NLA P R ++ ++ Sbjct: 282 IIAQADPPEKVAQKPISILLVGRTGSGKSSLINTLF-QANLAEVDVLPSTDRIKNYHWST 340 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 P S + L D PGY + N + L+V SE T + L+ Sbjct: 341 PTGES--------LNLWDTPGYE-----QVNREDLRELVV---SEAKTADLLLLVTPALD 384 Query: 133 GVKQIDQDVFSFL-----DKKAVSYQIVLTKIDKLSP 164 Q+D+D + D KA++ ++T++D+L P Sbjct: 385 PALQMDRDFLRDMRVEVPDLKAIA---IVTQVDRLRP 418 >gi|150002947|ref|YP_001297691.1| putative GTP-binding protein, putative GTPase [Bacteroides vulgatus ATCC 8482] gi|149931371|gb|ABR38069.1| putative GTP-binding protein, putative GTPase [Bacteroides vulgatus ATCC 8482] Length = 396 Score = 38.5 bits (88), Expect = 0.61, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I G+ N GKSSLIN L ++ A S+ PG T V K +++ P Sbjct: 7 PAANRLHIVLFGKRNSGKSSLINALTG-QDTALVSDIPGTTTD---AVSKAME-IQHIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I R L ++ R L+ C G + ++ Sbjct: 62 CL-FIDTPGF----------DDEGELGEMRITRTL--KAIERTDIALLLCEDGNCEDEKQ 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L+K+ + ++L K D ++ + T+ I +P +I S+ ++ GIE Sbjct: 109 WMEQLNKRNIPVILILNKAD------IRKDIASTRDRIEKECGQNPLII--SAKEQTGIE 160 Query: 201 VLRKAILETI 210 + +AILE + Sbjct: 161 KILQAILEKL 170 >gi|78357319|ref|YP_388768.1| small GTP-binding protein domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219724|gb|ABB39073.1| iron-only hydrogenase maturation protein HydF [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 400 Score = 38.5 bits (88), Expect = 0.61, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 22/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR N GKSSLIN L ++ +A S+ PG T V K + L Sbjct: 13 ITLVGRRNAGKSSLINALAGQQ-IAIVSDVPGTTTD---PVAKPYELLPLG--------- 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 P Y A + G + VR + V LL+ G+++ ++ + + L +S Sbjct: 60 PVTFYDTAGLDDSGELGEMRVRSARKVLARTDVALLVVSEAGMEEAEKRMLADLQAMEIS 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K Q+ + +R A + SSV +KGI L+ AI+E + Sbjct: 120 ALVVFNK---------QDIADVRPEDVRFCHEAGVRHVQVSSVAQKGISELKSAIVEMV 169 >gi|261749359|ref|YP_003257044.1| GTP-binding protein EngA [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497451|gb|ACX83901.1| GTP-binding protein EngA [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 439 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 11/142 (7%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKN 81 ++ K P + GR NVGKS+LIN + KN +N G T+ L+ F K Sbjct: 171 IMEKEVLPRFSVIGRPNVGKSTLINSFL-EKNHHIVTNVSGTTRDSLDVFCKKLGY---- 225 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD PG ++++ + + R + + +L++D G + D+++ Sbjct: 226 ---KCILVDTPGVRKKSKISESLEFYSTM--RTVKSIESTDICFLMVDAVRGWEAQDRNI 280 Query: 142 FSFLDKKAVSYQIVLTKIDKLS 163 F +++ I++ K D L+ Sbjct: 281 FRLVERNQKGIIILINKWDLLN 302 >gi|254884683|ref|ZP_05257393.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319642352|ref|ZP_07997007.1| hypothetical protein HMPREF9011_02607 [Bacteroides sp. 3_1_40A] gi|254837476|gb|EET17785.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317386012|gb|EFV66936.1| hypothetical protein HMPREF9011_02607 [Bacteroides sp. 3_1_40A] Length = 396 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I G+ N GKSSLIN L ++ A S+ PG T V K +++ P Sbjct: 7 PAANRLHIVLFGKRNSGKSSLINALTG-QDTALVSDIPGTTTD---AVSKAME-IQHIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I R L ++ R L+ C G + ++ Sbjct: 62 CL-FIDTPGF----------DDEGELGEMRITRTL--KAIERTDIALLLCEDGNCEDEKQ 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L+K+ + ++L K D ++ + T+ I +P +I S+ ++ GIE Sbjct: 109 WMEQLNKRNIPVILILNKAD------IRKDIASTRDRIEKECGQNPLII--SAKEQTGIE 160 Query: 201 VLRKAILETI 210 + +AILE + Sbjct: 161 KILQAILEKL 170 >gi|302878616|ref|YP_003847180.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans ES-2] gi|302581405|gb|ADL55416.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans ES-2] Length = 470 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 27/135 (20%), Positives = 61/135 (45%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP++A GR NVGKS+L+N ++ + + + PG T+ + + + + + Sbjct: 178 PPKLAIVGRPNVGKSTLVNAILGEQRVI-AFDQPGTTRDSIYI------DFERDGKQYTI 230 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ ++ + +++ + V L++D R + + D V F+ + Sbjct: 231 IDTAGVRRRGKVEEAIEKFS--VIKTMQAIEDANVVVLVVDARDQITEQDAHVADFVLQA 288 Query: 149 AVSYQIVLTKIDKLS 163 + + + K D L Sbjct: 289 GRALVLAVNKWDGLD 303 >gi|168017549|ref|XP_001761310.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687650|gb|EDQ74032.1| predicted protein [Physcomitrella patens subsp. patens] Length = 575 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV +K TS PG+T+H + + + L D Sbjct: 292 VGFVGYPNVGKSSTINALVGQKKTGVTST-PGKTKHFQTLIMSE---------RLTLCDC 341 Query: 92 PG 93 PG Sbjct: 342 PG 343 >gi|332711902|ref|ZP_08431832.1| ribosome-associated GTPase EngA [Lyngbya majuscula 3L] gi|332349230|gb|EGJ28840.1| ribosome-associated GTPase EngA [Lyngbya majuscula 3L] Length = 463 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 22/170 (12%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +P + +P+ ++A GR NVGKSSL+N L +N + S G T+ V + + Sbjct: 165 LPNVDNIPEIPEIKVAIVGRPNVGKSSLLNTLTG-ENRSIVSPISGTTRDAIDMVVQRSA 223 Query: 78 NLKNNLPAMA--LVDMPGYGYARAPKKNVDSWG----GLIVRYLSERSTLRCVYLLIDCR 131 + + A L+D G KKNV ++G G+ + + R + V L+ID Sbjct: 224 DPEKGTEAQTYRLIDTAGI----RKKKNV-TYGPEFFGINRAFKAIRRS-DVVLLVIDAI 277 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 GV + DQ + + + + IV+ K D +EK Y I +Y Sbjct: 278 DGVTEQDQKLAGRIADEGRAAVIVVNKWD---------AIEKDSYTIYDY 318 >gi|308187766|ref|YP_003931897.1| GTP-binding protein engA [Pantoea vagans C9-1] gi|308058276|gb|ADO10448.1| GTP-binding protein engA [Pantoea vagans C9-1] Length = 496 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ DQ + Sbjct: 46 EVEGREFIVIDTGGIDGTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D L P A Sbjct: 106 LRSRQKATFLVANKTDGLDPDQA 128 >gi|298714774|emb|CBJ25673.1| MTIF2, mitochondrial translation initiation factor 2 [Ectocarpus siliculosus] Length = 1028 Score = 38.5 bits (88), Expect = 0.62, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 29/187 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP ++ G + GK++L++ L K + A G TQ + F +++ ++ Sbjct: 448 PPVVSVMGHVDHGKTTLLDALRTSKAKVAGTEAAGITQKIGAF------SVEVKDSSVTF 501 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK- 147 D PG+ ++ +R+ + R T V ++I GVK +VF L + Sbjct: 502 FDTPGHAAFKS------------MRHATSRLT-DIVVVVIAADDGVKSQTVEVFDLLKEF 548 Query: 148 KAVSYQIVLTKIDKLSPTT-------AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 ++ + +TKID+ T +++ LE + L Y P ++P S+V R+G + Sbjct: 549 PNLAPVVAVTKIDQYDVDTEKAVDRISRQLLEHS-ILTEGYGGEVP-IVPVSAVTREGFD 606 Query: 201 VLRKAIL 207 L + +L Sbjct: 607 DLLETLL 613 >gi|292492503|ref|YP_003527942.1| small GTP-binding protein [Nitrosococcus halophilus Nc4] gi|291581098|gb|ADE15555.1| small GTP-binding protein [Nitrosococcus halophilus Nc4] Length = 464 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 13/155 (8%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S + L G E G+ +A + A GR NVGKS+L+N L+ + + + APG T+ + Sbjct: 159 STLLPLEGKEEAGI--QARGLQFAVVGRPNVGKSTLVNRLLGEERVL-SFEAPGTTRD-S 214 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLI 128 +P F + + LVD G R K +D I + L + V L+I Sbjct: 215 IAIP--FCHQGQD---YTLVDTAGI---RRRSKILDMLEKFSIAKTLEAIEAAQVVILVI 266 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 D R GV + D + + + + I + K D LS Sbjct: 267 DAREGVVEQDLHLAGLILESGKAVVIAVNKWDGLS 301 >gi|115351797|ref|YP_773636.1| GTP-binding protein EngA [Burkholderia ambifaria AMMD] gi|170702835|ref|ZP_02893684.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10] gi|171321331|ref|ZP_02910290.1| small GTP-binding protein [Burkholderia ambifaria MEX-5] gi|122323095|sp|Q0BEX1|DER_BURCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|115281785|gb|ABI87302.1| small GTP-binding protein [Burkholderia ambifaria AMMD] gi|170132253|gb|EDT00732.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10] gi|171093388|gb|EDT38576.1| small GTP-binding protein [Burkholderia ambifaria MEX-5] Length = 445 Score = 38.5 bits (88), Expect = 0.62, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGLDDHARDRAKADLTRKLKFL--DFAKSH----YISAAKKTGIGALMRSV 345 >gi|308160158|gb|EFO62662.1| GTP-binding protein [Giardia lamblia P15] Length = 499 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 14/183 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + F G+ +VGKSSLIN + +K + PG T+HL ++P + L D Sbjct: 270 VGFFGQPSVGKSSLINGIYGKK-VVSVKLTPGHTKHLQTHYLPLSGIVTGETDRSFVLCD 328 Query: 91 MPGYGYA-RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG +A + + + G + R L + LL++C G K D+ + L+ + Sbjct: 329 CPGLVFAVKGSPRPLQVITG-VFPLARTREFLTPLRLLVECVPGFK---DDIVARLNLDS 384 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + ++++ P + E LE Y+ + T ++ R G+E+ + + + Sbjct: 385 LYTR--YPELNRKKPDSPGEILELYAYMWSYFSKGL-----TPNINRAGMELFKLVVNGS 437 Query: 210 INY 212 I Y Sbjct: 438 IAY 440 >gi|262375525|ref|ZP_06068758.1| GTP-binding protein Era [Acinetobacter lwoffii SH145] gi|262309779|gb|EEY90909.1| GTP-binding protein Era [Acinetobacter lwoffii SH145] Length = 342 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K L+ TS P T+H + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHILGQK-LSITSRKPQTTRH-------KIVGIDSREKSQAVFVD 93 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD--VFSFLDKK 148 PG KK V + ++ R + S LR V L++ K D V L Sbjct: 94 TPGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVVDAQKWTPNDDLVLEKLKNA 146 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V+ K+D L + + + N+ E++P S+++ +E LR I Sbjct: 147 EMPVILVINKLDTFENKNEALPLIREREKLMNF----AEIVPVSALRGANLEHLRDTI 200 >gi|47214430|emb|CAF95765.1| unnamed protein product [Tetraodon nigroviridis] Length = 1196 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 26/144 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKD--------FSNLK 80 P + G + GK+ +++ L R + A G TQ + VPK+ N K Sbjct: 609 PVVCVLGHVDTGKTKILDKL--RHTHVQDGEAGGITQQIGATNVPKETIVEQTKMVKNFK 666 Query: 81 NNL--PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 NL P M ++D PG+ +S+ L R S L++D HG++ Sbjct: 667 ENLKIPGMLIIDTPGH----------ESFSNLRNRG---SSLCDIAILVVDIMHGLEPQT 713 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKL 162 + + L +K + + L KID+L Sbjct: 714 LESINLLKEKKCPFIVALNKIDRL 737 >gi|218193406|gb|EEC75833.1| hypothetical protein OsI_12814 [Oryza sativa Indica Group] Length = 604 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV +K TS PG+T+H V + + L D Sbjct: 326 VGFVGYPNVGKSSTINALVGQKRTGVTST-PGKTKHFQTLVISE---------ELILCDC 375 Query: 92 PG 93 PG Sbjct: 376 PG 377 >gi|89890093|ref|ZP_01201604.1| GTPase [Flavobacteria bacterium BBFL7] gi|89518366|gb|EAS21022.1| GTPase [Flavobacteria bacterium BBFL7] Length = 433 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 17/143 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L+ R+ A T G T+ + + N +++D Sbjct: 4 VAIVGRPNVGKSTLFNRLIQRRE-AITDAVSGVTRD------RHYGKSDWNGKEFSVIDT 56 Query: 92 PGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 GY G + +D L + + ++D G+ +D+DV L K Sbjct: 57 GGYVVGSDDVFEAEIDHQVELAI------DEADVIVFMVDAESGITGMDEDVAKLLRKVK 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLE 172 + + K+D +P Q+ E Sbjct: 111 KPVILAVNKVD--NPQREQDAYE 131 >gi|56461130|ref|YP_156411.1| GTP-binding protein EngA [Idiomarina loihiensis L2TR] gi|81821723|sp|Q5QYB3|DER_IDILO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|56180140|gb|AAV82862.1| GTPase EngA [Idiomarina loihiensis L2TR] Length = 479 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 9/141 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+LIN ++ + + + PG T+ + ++P ++ N L Sbjct: 191 PLKLAIVGRPNVGKSTLINRILGEERVV-VYDMPGTTRD-SVYIP-----MQRNEREYVL 243 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L V +++D R + D ++ F Sbjct: 244 IDTAGVRRRGRIGEAIEKFS--VVKTLQAIEDANVVLIVVDARETISDQDLNLIGFALNA 301 Query: 149 AVSYQIVLTKIDKLSPTTAQE 169 S I + K D L +E Sbjct: 302 GRSIVIAVNKWDGLQNDHKEE 322 >gi|328949043|ref|YP_004366380.1| GTP-binding protein engA [Treponema succinifaciens DSM 2489] gi|328449367|gb|AEB15083.1| GTP-binding protein engA [Treponema succinifaciens DSM 2489] Length = 517 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 20/185 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I +GR NVGKS+L N L + K A T PG T+ P + + + LP + L+ Sbjct: 63 PLIVIAGRPNVGKSTLFNALTHTKR-AITDPTPGVTRD-----PVEGTCFLSGLP-VHLM 115 Query: 90 DMPGYGYARAPKKNVDSWGGLIV-RYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D GY R K L+V + +S + LL+D + D+++ L Sbjct: 116 DTGGYKLTRNLKSRESEMDDLVVEKTVSMFQKADKILLLLDATE-INSEDEELIHLL--- 171 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVLRKAIL 207 SY DKL + K ++L NY ++ S+ G+ VL++ ++ Sbjct: 172 -RSYS------DKLIVAVNKTEGGKNEHLAYNYMKYGFKDISLISAFHGDGLNVLQEKMI 224 Query: 208 ETINY 212 E +++ Sbjct: 225 EGLDF 229 >gi|322392688|ref|ZP_08066148.1| ribosome-associated GTPase EngA [Streptococcus peroris ATCC 700780] gi|321144680|gb|EFX40081.1| ribosome-associated GTPase EngA [Streptococcus peroris ATCC 700780] Length = 436 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 19/160 (11%) Query: 24 LPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 167 FEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDADG 222 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 ++D G + +N + + + +RS + V ++++ G+++ D+ + Sbjct: 223 Q--EFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRI 278 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++N+ Sbjct: 279 AGFAHEAGKGMIIVVNKWD---------TLEKDNHTMKNW 309 >gi|317496002|ref|ZP_07954364.1| selenocysteine-specific translation elongation factor [Gemella moribillum M424] gi|316913906|gb|EFV35390.1| selenocysteine-specific translation elongation factor [Gemella moribillum M424] Length = 627 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 30/185 (16%) Query: 32 IAFSGRSNVGKSSLINILVN-RKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA---MA 87 I +G + GK++LI L + + G + +L F +LP+ Sbjct: 7 IGTAGHIDHGKTTLIKALSGIETDTTQEEKERGMSINLGFAYF--------DLPSGKRCG 58 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD+PG+ I L+ S + V LL+D R G+ ++ F L Sbjct: 59 VVDVPGHER-------------FIKNMLAGVSGINLVLLLVDSREGIMPQTKEHFDILTL 105 Query: 148 KAV-SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +Y IV+TKID + + E + P +I S+ +KG++ L Sbjct: 106 LGIENYIIVMTKIDLVEEEYRELVKEDIRAFTAGTPLEDAPIIEVDSISKKGLDTL---- 161 Query: 207 LETIN 211 LETI+ Sbjct: 162 LETID 166 >gi|239816200|ref|YP_002945110.1| GTP-binding protein HSR1-related [Variovorax paradoxus S110] gi|239802777|gb|ACS19844.1| GTP-binding protein HSR1-related [Variovorax paradoxus S110] Length = 473 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK-NNLPAMALVD 90 IA G +N GK+SL+ L R N S PG T+H+ +L+ N A+ D Sbjct: 11 IAVVGHTNAGKTSLLRTLTRRANFGEVSQRPGTTRHVESV------DLEVNGQAAVRFFD 64 Query: 91 MPGYGYARAPKKNVDSWGG 109 PG A A ++++ G Sbjct: 65 TPGLEDAVALREHLAGLDG 83 >gi|291297034|ref|YP_003508432.1| small GTP-binding protein [Meiothermus ruber DSM 1279] gi|290471993|gb|ADD29412.1| small GTP-binding protein [Meiothermus ruber DSM 1279] Length = 453 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 73/186 (39%), Gaps = 32/186 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRK-----------NLARTSNAPGRTQHLNFFVPKDFSNLK 80 + GR NVGKSSL N L+ + A ++ PG T+ L V ++ Sbjct: 4 VVIVGRPNVGKSSLFNKLLGLRAAPEKAAKAGSQFAVVADVPGVTRDLKEGV------VE 57 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + LVD G +K + + R +++ V +D R + D + Sbjct: 58 SEQGRFKLVDTGGLWSGDVWEKKIKQ---KVERAIADAD---LVLFAVDGRSDIVTADLE 111 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 V FL ++ +V TKID P + YL Y E +PTS+ +G + Sbjct: 112 VADFLRRQGKPVLLVATKID--DP-------KHEAYLGSFYALGFGEPVPTSAAHSRGFD 162 Query: 201 VLRKAI 206 L + I Sbjct: 163 ELLERI 168 >gi|225374467|ref|ZP_03751688.1| hypothetical protein ROSEINA2194_00082 [Roseburia inulinivorans DSM 16841] gi|225213705|gb|EEG96059.1| hypothetical protein ROSEINA2194_00082 [Roseburia inulinivorans DSM 16841] Length = 449 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 21/144 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + ++ + PG T+ + + S L +N ++ Sbjct: 11 PVVAIVGRPNVGKSTLFNALAGER-ISIVQDTPGVTRDRIY---AEVSWLDHNF---TMI 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P N +I+ + E++ T + ++D R G++ D V Sbjct: 64 DTGGI----EPDSN-----DIILSQMREQAEIAIATADVIMFIVDVRQGLQDSDSKVADM 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 L + +V+ K+D A Sbjct: 115 LRRSGKPVVLVVNKVDSFEKYMAD 138 Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 17/184 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA G+ NVGKSSLIN L + S+ G T+ +++K N + Sbjct: 185 PKIAIIGKPNVGKSSLINKLAQEDRVI-VSDIAGTTRDAI------DTDIKYNGKEYVFI 237 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ ++ID GV + D + + Sbjct: 238 DTAGLRRKNKIKEEIERYS--IIRAVTAVERADVCIIVIDATEGVTEQDAKIAGIAHDRG 295 Query: 150 VSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 I + K D + T EK + ++ P A I S +R L K I Sbjct: 296 KGIIIAVNKWDAIEKDDKTIYRHTEKIRDILSFMPYAEIIFISAKSGQR-----LNK-IF 349 Query: 208 ETIN 211 ETI+ Sbjct: 350 ETID 353 >gi|213966005|ref|ZP_03394195.1| bifunctional cytidylate kinase/GTP-binding protein [Corynebacterium amycolatum SK46] gi|213951419|gb|EEB62811.1| bifunctional cytidylate kinase/GTP-binding protein [Corynebacterium amycolatum SK46] Length = 773 Score = 38.5 bits (88), Expect = 0.64, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 18/196 (9%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 VP LP GP +A G+ NVGKSSL+N L + +N A SN G T P D S Sbjct: 501 VPRAKSLP-TGPRRVALVGKPNVGKSSLLNKL-SGENRAVVSNVAGTTVD-----PVD-S 552 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL---RCVYLLIDCRHGV 134 ++ + VD G KK + G L RST+ V L+D + Sbjct: 553 LVQMDETLWRFVDTAG-----IRKKTKTAKGHEFYASLRTRSTIDNAEVVIFLVDASEQI 607 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + DQ V + + + K D + + + + + P A + S+ Sbjct: 608 TEQDQRVLRMILDSGRALVVAYNKWDLMDEDRRDLLEREIEEQLAHVPWARR--VNISAK 665 Query: 195 KRKGIEVLRKAILETI 210 + ++ L A+LE + Sbjct: 666 TGRAVQKLEPAMLEAV 681 >gi|206890795|ref|YP_002249040.1| tRNA modification GTPase TrmE [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742733|gb|ACI21790.1| tRNA modification GTPase TrmE [Thermodesulfovibrio yellowstonii DSM 11347] Length = 460 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 25/177 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ K+ A + PG T+ + +++ N+K +P + +VD Sbjct: 229 AIVGKPNVGKSSLLNALL-MKDRAIVTEVPGTTRD----IIEEYVNIK-GMP-LKIVDTA 281 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R V++ G I R L V L++D + +D+++ S + +K + Sbjct: 282 GI---RQAHDLVEAEG--IKRTLRAVELAELVLLVLDASRPIDSLDEEIISRITQKRLI- 335 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K D + + +L +N PT + S++K +GIE L++ I +T Sbjct: 336 -VVINKKD-----IKNKEFQLPDFL-KNKPT-----VEISALKGEGIEELKELIFKT 380 >gi|53370697|gb|AAU89192.1| expressed protein [Oryza sativa Japonica Group] gi|222625460|gb|EEE59592.1| hypothetical protein OsJ_11901 [Oryza sativa Japonica Group] Length = 605 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV +K TS PG+T+H V + + L D Sbjct: 327 VGFVGYPNVGKSSTINALVGQKRTGVTST-PGKTKHFQTLVISE---------ELILCDC 376 Query: 92 PG 93 PG Sbjct: 377 PG 378 >gi|116754134|ref|YP_843252.1| GTP-binding protein [Methanosaeta thermophila PT] gi|116665585|gb|ABK14612.1| GTP-binding protein, HSR1-related protein [Methanosaeta thermophila PT] Length = 190 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 15/91 (16%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALV 89 EI GRSNVGKS+L L + P GR + F + +S NL V Sbjct: 3 EIVLVGRSNVGKSTLFRALTGER-------VPIGRRPGVTF---RPYSVRIGNL---TYV 49 Query: 90 DMPGYGYAR-APKKNVDSWGGLIVRYLSERS 119 DMPGYG+ + ++ + LIVRYL + + Sbjct: 50 DMPGYGFMKYRSWRDQERVKDLIVRYLEDHA 80 >gi|311694388|gb|ADP97261.1| GTP-binding protein EngA [marine bacterium HP15] Length = 452 Score = 38.5 bits (88), Expect = 0.65, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 16/160 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L+N ++ + + PG T+ + ++P + + L+D Sbjct: 158 IGVVGRPNVGKSTLVNRMLGEDRVV-VYDMPGTTRD-SVYIPYERQGSQ-----YTLIDT 210 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + V+ + I++ L V L+ID R G+ D + F+ S Sbjct: 211 AGVRRRKNVSEVVEKFS--IIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRS 268 Query: 152 YQIVLTKIDKLSP-------TTAQETLEKTKYLIRNYPTA 184 I + K D + P Q L+ Y ++Y +A Sbjct: 269 LVIAVNKWDGMDPEDRARVKEQVQRRLDFLDYADKHYISA 308 >gi|226357377|ref|YP_002787117.1| GTP-binding protein EngA [Deinococcus deserti VCD115] gi|259645869|sp|C1D094|DER_DEIDV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226319367|gb|ACO47363.1| putative GTP-binding protein [Deinococcus deserti VCD115] Length = 441 Score = 38.5 bits (88), Expect = 0.65, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 17/132 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL N L+ R+ A ++ PG T+ K+ L +N + LVD Sbjct: 3 KVAIVGRPNVGKSSLFNRLIGRRE-AVVADFPGVTRD-----AKEGLMLYHN-HRITLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G D W I R +E + + V ++D R G+ D +V +L + Sbjct: 56 TGGLWSG-------DEWEAAI-REKAEWAMEGAQAVVFVLDPREGLSAADYEVADWLRRV 107 Query: 149 AVSYQIVLTKID 160 +V KID Sbjct: 108 GKPVIVVANKID 119 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P+ P I+ GR NVGKSSL+N + N + A ++ PG T+ + V DF + Sbjct: 167 VPEVAPIRISLIGRPNVGKSSLLNAITN-TDRAIVADQPGTTRD-SLDVEWDFGGQR--- 221 Query: 84 PAMALVDMPG 93 LVD G Sbjct: 222 --FVLVDTAG 229 >gi|218889917|ref|YP_002438781.1| GTP-binding protein EngA [Pseudomonas aeruginosa LESB58] gi|226741143|sp|B7UWJ2|DER_PSEA8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218770140|emb|CAW25902.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa LESB58] Length = 493 Score = 38.5 bits (88), Expect = 0.65, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 16/187 (8%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + A T + ++P + N Sbjct: 191 GPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAG--TTRDSIYIP-----FERN 243 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + V+ + +V+ L V ++D R GV + D ++ Sbjct: 244 EEKYTLIDTAGVRRRGKIFEAVEKFS--VVKTLQAIQDANVVIFVMDAREGVVEHDLNLL 301 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 F+ + + I L K D + A+ KT+ R ++ S++ G+ L Sbjct: 302 GFVLETGRALVIALNKWDGME--AAERDYVKTELERRLLFVDFADIHFISALHGTGVGHL 359 Query: 203 RKAILET 209 K++ E+ Sbjct: 360 YKSVQES 366 >gi|189463677|ref|ZP_03012462.1| hypothetical protein BACINT_00008 [Bacteroides intestinalis DSM 17393] gi|189438627|gb|EDV07612.1| hypothetical protein BACINT_00008 [Bacteroides intestinalis DSM 17393] Length = 437 Score = 38.5 bits (88), Expect = 0.65, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 19/144 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEERNIVTEIAGTTRDSIYTRYNKFGF--DFY------- 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D GV+ D ++FS Sbjct: 227 ---LVDTAGIRKKNKVNEDLEYYS--VIRSIRSIENADVCILMLDATRGVESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 + K A +V+ K D + T + Sbjct: 282 IQKNAKGLVVVVNKWDLVQDKTVK 305 >gi|160890563|ref|ZP_02071566.1| hypothetical protein BACUNI_03006 [Bacteroides uniformis ATCC 8492] gi|270295703|ref|ZP_06201903.1| ribosome-associated GTPase EngA [Bacteroides sp. D20] gi|317479893|ref|ZP_07939009.1| ribosome-associated GTPase EngA [Bacteroides sp. 4_1_36] gi|156859562|gb|EDO52993.1| hypothetical protein BACUNI_03006 [Bacteroides uniformis ATCC 8492] gi|270273107|gb|EFA18969.1| ribosome-associated GTPase EngA [Bacteroides sp. D20] gi|316903940|gb|EFV25778.1| ribosome-associated GTPase EngA [Bacteroides sp. 4_1_36] Length = 437 Score = 38.5 bits (88), Expect = 0.65, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DFY------- 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++FS Sbjct: 227 ---LVDTAGIRKKNKVNEDLEYYS--VIRSIRSIENADVCILMVDATRGIESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEV 201 + K A +V+ K D + T + ++ + IRN P + ++ K++ ++V Sbjct: 282 IQKNAKGLVVVVNKWDLVKDKTVK-VMKTFEDAIRNRFAPFVDFPIIFASALTKQRILKV 340 Query: 202 LRKA 205 L +A Sbjct: 341 LEEA 344 >gi|238027075|ref|YP_002911306.1| GTP-binding protein EngA [Burkholderia glumae BGR1] gi|237876269|gb|ACR28602.1| GTPase family protein [Burkholderia glumae BGR1] Length = 448 Score = 38.5 bits (88), Expect = 0.66, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 9/140 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V DF +N P L+D Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRVI-AFDMPGTTRD-SIYV--DFE--RNGKP-YTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQET 170 + + + K D L + T Sbjct: 292 ALVVGVNKWDGLDSHARERT 311 >gi|332300532|ref|YP_004442453.1| GTP-binding protein engA [Porphyromonas asaccharolytica DSM 20707] gi|332177595|gb|AEE13285.1| GTP-binding protein engA [Porphyromonas asaccharolytica DSM 20707] Length = 436 Score = 38.5 bits (88), Expect = 0.66, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 18/160 (11%) Query: 23 LLPKAGP-------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 LLPK G P A GR N GKSSL+N L+ + T + G T+ F Sbjct: 162 LLPKEGNHEPLLELPRFAIVGRPNAGKSSLLNALIGEERNIVTDRS-GTTRDSIFAEYDK 220 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 F+ LVD G + K N D ++R + +LID G++ Sbjct: 221 FNQ------HFYLVDTA--GIRKKGKVNEDLEYYSVIRAIRAIENADVCIMLIDATRGIE 272 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEK 173 D ++F + + + + K D + + Q T+E+ Sbjct: 273 AQDANIFRVIQRNNKGLVVCVNKWDLVEDKSMPVQRTMEE 312 >gi|189462216|ref|ZP_03011001.1| hypothetical protein BACCOP_02899 [Bacteroides coprocola DSM 17136] gi|189431069|gb|EDV00054.1| hypothetical protein BACCOP_02899 [Bacteroides coprocola DSM 17136] Length = 437 Score = 38.5 bits (88), Expect = 0.67, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEERNIVTEIAGTTRDSIYTRYDKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + +VR + L++D G++ D ++FS Sbjct: 226 --YLVDTAGIRKKNKVSEDLEYYS--VVRSIRSIENSDVCILMLDATRGIEGQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY---PTAHPEVIPTSSVKRKGIEV 201 + + +V+ K D + TA+ ++ + IRN T P + ++ K++ +V Sbjct: 282 IQRNQKGLVVVVNKWDLVEEKTAK-VMKNYEEAIRNRFAPFTDFPIIFASALTKQRIFKV 340 Query: 202 LRKA 205 L A Sbjct: 341 LEAA 344 >gi|329565799|gb|AEB92236.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] gi|329565803|gb|AEB92238.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] gi|329565805|gb|AEB92239.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] Length = 404 Score = 38.5 bits (88), Expect = 0.67, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 191 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 243 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 244 GI---RDTDELVEKIG--VAKSKEVLAEADLILFVLDASRELTKEDYEIFDILVGKNIVF 298 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E TK I +I S+V++ G++ L I Sbjct: 299 --VLNKIDLPKKIDEKELKNLTKDGI---------IIEVSTVEKIGLQELEDTI 341 >gi|313886089|ref|ZP_07819824.1| ribosome biogenesis GTPase Der [Porphyromonas asaccharolytica PR426713P-I] gi|312924435|gb|EFR35209.1| ribosome biogenesis GTPase Der [Porphyromonas asaccharolytica PR426713P-I] Length = 436 Score = 38.5 bits (88), Expect = 0.67, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 18/160 (11%) Query: 23 LLPKAGP-------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 LLPK G P A GR N GKSSL+N L+ + T + G T+ F Sbjct: 162 LLPKEGNHEPLLELPRFAIVGRPNAGKSSLLNALIGEERNIVTDRS-GTTRDSIFAEYDK 220 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 F+ LVD G + K N D ++R + +LID G++ Sbjct: 221 FNQ------HFYLVDTA--GIRKKGKVNEDLEYYSVIRAIRAIENADVCIMLIDATRGIE 272 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEK 173 D ++F + + + + K D + + Q T+E+ Sbjct: 273 AQDANIFRVIQRNNKGLVVCVNKWDLVEDKSMPVQRTMEE 312 >gi|311070643|ref|YP_003975566.1| tRNA modification GTPase TrmE [Bacillus atrophaeus 1942] gi|310871160|gb|ADP34635.1| tRNA modification GTPase TrmE [Bacillus atrophaeus 1942] Length = 459 Score = 38.5 bits (88), Expect = 0.67, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 228 GRPNVGKSSLLNSLVHETK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L +L+ + + ++DV F K + ++ Sbjct: 280 --RETEDIVEKIGVERSRQVLKEADL----ILLVLNYSEELSEEDVKLFEAVKGMDVIVI 333 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L K D L P ++ K L P V+ TS +K +GI L +AI Sbjct: 334 LNKTD-LEPKIDA---DRVKELANGRP-----VVTTSLLKEEGITDLEEAI 375 >gi|310643039|ref|YP_003947797.1| gtp-binding protein era-like protein [Paenibacillus polymyxa SC2] gi|309247989|gb|ADO57556.1| GTP-binding protein era-like protein [Paenibacillus polymyxa SC2] Length = 300 Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 17/162 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ K + +D Sbjct: 11 VAIVGRPNVGKSTLMNHVIGQK-IAIMSDKPQTTRN------KIHGVYTTEDTQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + R K D L E + V LID G+ D+ + L + Sbjct: 64 PGI-HKRQSKLG-DYMNQTAFNSLGE---VEAVLFLIDAAEGLGGGDRFIAEQLKQVKTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +VL KID++ P +E+ + L Y A E++P S+ Sbjct: 119 VILVLNKIDRIEPEALLPLIEQYRKL---YDFA--EIVPISA 155 >gi|222110307|ref|YP_002552571.1| gtp-binding protein enga [Acidovorax ebreus TPSY] gi|254783151|sp|B9MFY0|DER_ACIET RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|221729751|gb|ACM32571.1| Miro domain protein [Acidovorax ebreus TPSY] Length = 447 Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 17/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR NVGKS+LIN + + L + PG T+ VP + N L+D Sbjct: 182 LAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDA-ISVP-----FERNGQKFELIDT 234 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D GV D + ++ + + Sbjct: 235 AGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRA 292 Query: 152 YQIVLTKIDKLSPTTAQETLEK---TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 I + K D + Q+ LE+ T+ + H S+ KR+GI L +I++ Sbjct: 293 VVIAVNKWDAVDDYGRQQ-LERSIETRLSFLKFAPLH----FISAKKRQGIGPLWSSIIQ 347 Query: 209 T 209 Sbjct: 348 A 348 >gi|254248074|ref|ZP_04941395.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184] gi|124872850|gb|EAY64566.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184] Length = 445 Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGLDDHARDRAKADLTRKLKFL--DFAKSH----FISAAKKTGIGALMRSV 345 >gi|53802851|ref|YP_115425.1| tRNA modification GTPase TrmE [Methylococcus capsulatus str. Bath] gi|81823572|sp|Q602M5|MNME_METCA RecName: Full=tRNA modification GTPase mnmE gi|53756612|gb|AAU90903.1| tRNA modification GTPase TrmE [Methylococcus capsulatus str. Bath] Length = 448 Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 35/183 (19%) Query: 34 FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL----V 89 +GR NVGKSSL+N L R +LA + PG T+ L L+ +L L V Sbjct: 222 IAGRPNVGKSSLLNALAGR-DLAIVTEIPGTTRDL----------LRESLQVGGLPLHIV 270 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R + ++ G I R + C+ L+ D RH D + Sbjct: 271 DTAGL---RDSEDPIEREG--IRRARDALANADCILLVCDARHTEA---GDALPADLPET 322 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + KID L+ A T+E+ VI S+ +G+++LR+ I+ Sbjct: 323 IPLIRIFNKID-LTGAPASLTVERETT-----------VIHLSARTGEGVDLLRQEIIRR 370 Query: 210 INY 212 Y Sbjct: 371 AGY 373 >gi|66809101|ref|XP_638273.1| guanine nucleotide binding protein 1 [Dictyostelium discoideum AX4] gi|60466709|gb|EAL64760.1| guanine nucleotide binding protein 1 [Dictyostelium discoideum AX4] Length = 846 Score = 38.5 bits (88), Expect = 0.68, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 22/108 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G NVGKSSLIN ++ +K + TS PG T+H V F+ KN + L+D Sbjct: 486 IGMVGHPNVGKSSLINGMMGKK-VVSTSRTPGHTKHFQTIV---FT--KN----IQLLDC 535 Query: 92 PGYGYARAPK-KNVDSWGGLI-----------VRYLSERSTLRCVYLL 127 PG + + K + GL ++YL+ER + +Y L Sbjct: 536 PGLVFPALDRPKQLQILCGLFPIAQVREPFSAIQYLAERVPIEQIYKL 583 >gi|329565793|gb|AEB92233.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] gi|329565813|gb|AEB92243.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] Length = 404 Score = 38.5 bits (88), Expect = 0.69, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 191 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 243 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 244 GI---RDTDELVEKIG--VAKSKEVLAEADLILFVLDASRELTKEDYEIFDILVGKNIVF 298 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E TK I +I S+V++ G++ L I Sbjct: 299 --VLNKIDLPKKIDEKELKNLTKDGI---------IIEVSTVEKIGLQELEDTI 341 >gi|309810373|ref|ZP_07704208.1| ribosome biogenesis GTPase Der [Dermacoccus sp. Ellin185] gi|308435686|gb|EFP59483.1| ribosome biogenesis GTPase Der [Dermacoccus sp. Ellin185] Length = 506 Score = 38.5 bits (88), Expect = 0.69, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAP 62 G P+ GP +A GR NVGKSSL+N L + N+A T+ P Sbjct: 237 GAYPRGGPRRVALLGRPNVGKSSLLNKLAGEERVVVDNVAGTTRDP 282 >gi|302393066|ref|YP_003828886.1| iron-only hydrogenase maturation protein HydF [Acetohalobium arabaticum DSM 5501] gi|302205143|gb|ADL13821.1| iron-only hydrogenase maturation protein HydF [Acetohalobium arabaticum DSM 5501] Length = 411 Score = 38.5 bits (88), Expect = 0.69, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 28/186 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+A IA GR N GKSSLIN L N ++LA S G T + K L + Sbjct: 5 PQANRLHIAILGRRNAGKSSLINALTN-QDLAVVSKVAGTTTDPVY---KRMEILP--IG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDV 141 + ++D G + G L V+ E R+ L L+ID G+ + +Q++ Sbjct: 59 PVVVIDTAGI-------DDTGELGDLRVKKTKEVLGRTDL--AVLVIDPELGIDEYEQEL 109 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + + + V+ K DK E E+ E+I S+ + IE Sbjct: 110 LQEIKDRDIPVVGVINKEDKFEEIDVAEFNEELGM----------ELIAVSAKEGTNIEK 159 Query: 202 LRKAIL 207 L+K I+ Sbjct: 160 LKKEII 165 >gi|228475961|ref|ZP_04060669.1| ribosome-associated GTPase EngA [Staphylococcus hominis SK119] gi|314936392|ref|ZP_07843739.1| ribosome-associated GTPase EngA [Staphylococcus hominis subsp. hominis C80] gi|228269784|gb|EEK11264.1| ribosome-associated GTPase EngA [Staphylococcus hominis SK119] gi|313655011|gb|EFS18756.1| ribosome-associated GTPase EngA [Staphylococcus hominis subsp. hominis C80] Length = 436 Score = 38.5 bits (88), Expect = 0.69, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ V ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEERVI-VSNVAGTTRDA---VDTEYSYDGQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS + V L+ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERSNV--VLLVIDAEEGIIEQDKRVAGYAHEEGKAMVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRN 180 + K D + T T++K +RN Sbjct: 293 VNKWDAVEKDT--NTMKKFADDVRN 315 >gi|152991112|ref|YP_001356834.1| GTP-binding protein EngA [Nitratiruptor sp. SB155-2] gi|166225831|sp|A6Q4R8|DER_NITSB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|151422973|dbj|BAF70477.1| GTP-binding protein, Era/ThdF family [Nitratiruptor sp. SB155-2] Length = 462 Score = 38.5 bits (88), Expect = 0.69, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 19/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N L+ ++ + S+ G T D S + N+ + +D Sbjct: 197 VAILGRVNVGKSSLLNALL-KEERSIVSDVAGTT-----IDTIDESTIYND-KVITFIDT 249 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R ++ + + + ER+ + L++D G+ + D+ + ++DK ++ Sbjct: 250 AGI-RRRGKIVGIEKYALNRTQKMLERADV--ALLVLDASEGITEQDERIAGYIDKYKLA 306 Query: 152 YQIVLTKID---KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 IVL K D K +E ++ K+L + +I S+ RK ++ L IL Sbjct: 307 CIIVLNKWDIAKKSYEEAVKEVRDRFKFL------SFAPIITLSAKTRKRVDRLYDLIL 359 >gi|86749731|ref|YP_486227.1| GTP-binding protein Era [Rhodopseudomonas palustris HaA2] gi|86572759|gb|ABD07316.1| GTP-binding protein [Rhodopseudomonas palustris HaA2] Length = 307 Score = 38.5 bits (88), Expect = 0.69, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 12/129 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V + S + LVD Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIESGSQI-------VLVDT 69 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ +D ++ + V +L+D R G+ + + +F L+ Sbjct: 70 PGIF---APKRRLDR--AMVRTAWTGAHDADAVCVLLDARAGIDEQAETIFGNLENVGHP 124 Query: 152 YQIVLTKID 160 +VL KID Sbjct: 125 KVLVLNKID 133 >gi|323702013|ref|ZP_08113682.1| small GTP-binding protein [Desulfotomaculum nigrificans DSM 574] gi|323533099|gb|EGB22969.1| small GTP-binding protein [Desulfotomaculum nigrificans DSM 574] Length = 409 Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 18/144 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR N GKSSLIN L N +++A SN G T + K L + Sbjct: 8 PRGNRLHIAIFGRRNAGKSSLINSLTN-QDIAVVSNIAGTTTDPVY---KSMEILP--IG 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDV 141 + ++D G +V G L R + L+ V L+ID G+ +QD+ Sbjct: 62 PVVIIDTAGI-------DDVGLLGEL--RVEKSKEVLKKADLVLLVIDAAEGITIYEQDL 112 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPT 165 ++ + V+ KID+ S T Sbjct: 113 IKECQQRDLPVVTVINKIDQNSVT 136 >gi|319779671|ref|YP_004130584.1| GTP-binding protein EngA [Taylorella equigenitalis MCE9] gi|317109695|gb|ADU92441.1| GTP-binding protein EngA [Taylorella equigenitalis MCE9] Length = 452 Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 83/181 (45%), Gaps = 21/181 (11%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+LIN L+ + + + PG T+ + DF ++N L+D Sbjct: 188 KLAIVGRPNVGKSTLINSLIGEQRVI-AFDLPGTTRDA---IEIDF---EHNNKKYKLID 240 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++++ + +++ L V L++D + + + D + F+ + Sbjct: 241 TAGLRKRGRVFESIEKFS--VIKTLQAIEACNVVVLVLDAQSEISEQDAHIAGFILESGR 298 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-----AHPEVIPTSSVKRKGIEVLRKA 205 + + + K D L +K ++IR + + +V S++K +GI+ L K+ Sbjct: 299 ALVVAINKWDGLDE-------DKRDWVIREFERKLRFLSFAKVHFISALKSQGIKSLLKS 351 Query: 206 I 206 + Sbjct: 352 V 352 >gi|260858460|ref|YP_003232351.1| hypothetical protein ECO26_5485 [Escherichia coli O26:H11 str. 11368] gi|257757109|dbj|BAI28611.1| hypothetical protein ECO26_5485 [Escherichia coli O26:H11 str. 11368] Length = 290 Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF-LDKK 148 D+PG G +R ++ L L E L V LI +D+ + + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRYILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|163851698|ref|YP_001639741.1| GTP-binding protein Era [Methylobacterium extorquens PA1] gi|163663303|gb|ABY30670.1| GTP-binding protein Era [Methylobacterium extorquens PA1] Length = 326 Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N LV A+ S + Q V + + LVD Sbjct: 36 VALIGVPNAGKSTLLNALVG----AKVSIVSRKVQTTRALV---RGIVMEGNAQIVLVDT 88 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ +D ++ S + V LLID R G + + + L + Sbjct: 89 PGIF---APKRRLDR--AMVHSAWSGAADADAVCLLIDARKGADEEVETILRRLPEVKRP 143 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L KID ++ E + K ++ + S++K GI LRKA+ Sbjct: 144 KILILNKIDLIARERLLELVAKLNAMV-----PFEDTFLISALKGDGIADLRKAL 193 >gi|145489801|ref|XP_001430902.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124398003|emb|CAK63504.1| unnamed protein product [Paramecium tetraurelia] Length = 607 Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 20/164 (12%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +++ I+TKS +GV + L + P ++ GR NVGKSSL+N L+ + Sbjct: 272 IANPIYTKSPIQEKQGVSKENLQLR-NPIMLSIMGRQNVGKSSLVNTLLGEDRVI-ADPT 329 Query: 62 PGRTQH--LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 PG T+ F+V K + LVD G PK D +I + RS Sbjct: 330 PGTTRDPISTFWVYKG--------QKIQLVDTA--GIEPKPKIQTDLDLQIIAKT---RS 376 Query: 120 TLR---CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 TLR V LLID +++D ++ + K+ I + K D Sbjct: 377 TLRFSNVVVLLIDSLGAFREVDLELAQEIVKQGRGLIIAVNKWD 420 >gi|283798881|ref|ZP_06348034.1| GTP-binding protein [Clostridium sp. M62/1] gi|291073338|gb|EFE10702.1| GTP-binding protein [Clostridium sp. M62/1] Length = 432 Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 14/137 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I+F G N GKSSL+N ++LA S+ G T V K L L Sbjct: 7 PSAERVHISFFGCRNAGKSSLLNAFTG-QDLAVVSDVKGTTTDP---VKKSMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI-DCRHGVKQIDQDVFS 143 ++D PG + S GG VR + + + +L+ D + G+++ D+++ Sbjct: 61 PAVIIDTPGI-------DDEGSLGGRRVRKTRQILNMTDIAVLVADSQTGIRKEDRELAF 113 Query: 144 FLDKKAVSYQIVLTKID 160 +K V Y + K D Sbjct: 114 LFQEKEVPYVVAFNKCD 130 >gi|121997392|ref|YP_001002179.1| GTP-binding protein EngA [Halorhodospira halophila SL1] gi|166198720|sp|A1WUL5|DER_HALHL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|121588797|gb|ABM61377.1| small GTP-binding protein [Halorhodospira halophila SL1] Length = 472 Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 24/164 (14%) Query: 16 RGVPEI-----GLLPKAGPPEI----------AFSGRSNVGKSSLINILVNRKNLARTSN 60 RGV E+ LLP A P + A GR NVGKS+L+N L+ + + + Sbjct: 149 RGVGELLDAVFALLPPAEPDAVGSDGPGGIPVAMIGRPNVGKSTLVNRLLGEERVV-VYD 207 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG T+ + VP + + L+D G ++ V+ + +V+ L Sbjct: 208 EPGTTRD-SIAVP-----FERDGQHYTLIDTAGVRRRARVQETVEKFS--VVKTLEAIER 259 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 V L+ D + G+ + D + + + + +V+ K D L P Sbjct: 260 ASVVMLVTDAQEGITEQDAHLAGHVLQAGRALVLVINKWDGLDP 303 >gi|329565807|gb|AEB92240.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] gi|329565811|gb|AEB92242.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] Length = 404 Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 191 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 243 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 244 GI---RDTDELVEKIG--VAKSKEVLAEADLILFVLDASRELTKEDYEIFDILVGKNIVF 298 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E TK I +I S+V++ G++ L I Sbjct: 299 --VLNKIDLPKKIDEKELKNLTKDGI---------IIEVSTVEKIGLQELEDTI 341 >gi|329565797|gb|AEB92235.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] Length = 404 Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 191 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 243 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 244 GI---RDTDELVEKIG--VAKSKEVLAEADLILFVLDASRELTKEDYEIFDILVGKNIVF 298 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E TK I +I S+V++ G++ L I Sbjct: 299 --VLNKIDLPKKIDEKELKNLTKDGI---------IIEVSTVEKIGLQELEDTI 341 >gi|238853405|ref|ZP_04643784.1| GTP-binding protein Era [Lactobacillus gasseri 202-4] gi|238833977|gb|EEQ26235.1| GTP-binding protein Era [Lactobacillus gasseri 202-4] Length = 303 Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A S P T++ K ++ + +D Sbjct: 13 VALIGRPNVGKSTLLNFLVGQK-VAIMSPQPQTTRN------KISGIYTDDQEQIVFIDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK +D + + S + V +++ K DQ + L K Sbjct: 66 PGI---HKPKNKLDDF--MDKSSYSALDEVDVVLFMVEPEPAGKG-DQYIAELLKKIKKP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KIDK+ P ++ K L E++P S+ + + L K I + + Sbjct: 120 VFLVINKIDKVHPDKLLSIIDSYKNL-----GDFAEIVPISASQGNNVSELIKTIAKNL 173 >gi|57233850|ref|YP_182104.1| GTP-binding protein EngA [Dehalococcoides ethenogenes 195] gi|57224298|gb|AAW39355.1| GTP-binding protein [Dehalococcoides ethenogenes 195] Length = 441 Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P IA GR NVGKS+L+N L + KNLA T + PG T+ F Sbjct: 6 PIIAIVGRQNVGKSTLLNRLAH-KNLAITEDLPGTTRDRLF 45 Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust. Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 14/141 (9%) Query: 25 PKAGPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 P A P E +A GR+NVGKS+L+N + ++ + SN PG T+ P +F Sbjct: 170 PIATPEEDNSVKLALVGRTNVGKSTLLNTFMGQER-SIVSNIPGTTRDA-IDTPLNF--- 224 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 N + L+D G + V+ + ++R L V L++D V D Sbjct: 225 --NGTNVLLIDTAGIRRRGKVESGVEKYS--VLRALKAVDRADIVLLVMDTEELVTAQDT 280 Query: 140 DVFSFLDKKAVSYQIVLTKID 160 + ++ A I+L K D Sbjct: 281 HIAGYVRDTAKGIIIILNKWD 301 >gi|253743791|gb|EET00093.1| GTP-binding protein [Giardia intestinalis ATCC 50581] Length = 496 Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 18/185 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP--AMAL 88 + F G+ +VGKSSLIN + +K + PG T+HL ++P SN+ + + L Sbjct: 270 VGFFGQPSVGKSSLINGIYGKK-VVSVKLTPGHTKHLQTHYLP--LSNVVDGETDRSFVL 326 Query: 89 VDMPGYGYA-RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D PG +A + + + G + R L + LL++C G K+ + S LD Sbjct: 327 CDCPGLVFAVKGSPRPLQVITG-VFPLARTREFLTPLRLLVECVPGFKEDIVERLS-LDS 384 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 Y ++++ P + E LE Y+ + +V R G+E+ + + Sbjct: 385 LYARY----PELNRKEPNSPGEILELYAYMWSFFSKGL-----NPNVNRAGMELFKLIVN 435 Query: 208 ETINY 212 +I Y Sbjct: 436 GSIAY 440 >gi|257125220|ref|YP_003163334.1| GTP-binding protein EngA [Leptotrichia buccalis C-1013-b] gi|257049159|gb|ACV38343.1| small GTP-binding protein [Leptotrichia buccalis C-1013-b] Length = 441 Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 19/177 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV + L+ + PG T+ + + ++ + LVD Sbjct: 5 VAIVGRPNVGKSTLFNKLVGDR-LSIVKDEPGVTRD------RLYREIEWSGKEFILVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G P+ G + + + L+D + G+ +D+DV + L ++ Sbjct: 58 GGL----EPRTEDFMMGKIKQQAQVAIDEADVIIFLVDGKAGITGLDEDVATVLRRQDKK 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + KID L + + Y EVI S + + L A++E Sbjct: 114 VVVAVNKIDNY--------LRDQENIFEFYGLGFEEVIGISGEHKTNLGDLLDAVIE 162 >gi|294675553|ref|YP_003576169.1| ribosome-associated GTPase EngA [Prevotella ruminicola 23] gi|294472941|gb|ADE82330.1| ribosome-associated GTPase EngA [Prevotella ruminicola 23] Length = 437 Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 20/157 (12%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 G P A GR N GKSS+IN + ++A T+ T++ F DF Sbjct: 174 GIPRFAVVGRPNAGKSSIINAFIGEDRNIVTDIAGTTRDSIYTRYDKFGF--DFY----- 226 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 LVD G ++++ + ++R + L++D G++ D ++F Sbjct: 227 -----LVDTAGIRRKNKVTEDLEFYS--VMRSIRAIENSDVCVLMLDATRGIEAQDMNIF 279 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + K S +V+ K D L +QE ++ + IR Sbjct: 280 QLIQKNNKSLVVVVNKWD-LVEDKSQEVIKTFENAIR 315 >gi|281411667|ref|YP_003345746.1| small GTP-binding protein [Thermotoga naphthophila RKU-10] gi|281372770|gb|ADA66332.1| small GTP-binding protein [Thermotoga naphthophila RKU-10] Length = 404 Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 36/195 (18%) Query: 24 LPKAGPPE-IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 LP AG I +GR NVGKSS +N LV +N++ S G T P S Sbjct: 3 LPDAGFRRYIVVAGRRNVGKSSFMNTLVG-QNVSIVSEYAGTTTD-----PVYKSMELYP 56 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID---- 138 + + LVD PG +V G L V R V+ DC G+ D Sbjct: 57 VGPVTLVDTPGL-------DDVGELGRLRV------EKARRVFYRADC--GILVTDSEPT 101 Query: 139 ---QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 DV + + + + +V+ KID L E E+ K L + A +V+ S+++ Sbjct: 102 PYEDDVVNLFKEMEIPFVVVVNKIDVLG-----EKAEELKGLYESRYEA--KVLLVSALQ 154 Query: 196 RKGIEVLRKAILETI 210 +KG + + K I E + Sbjct: 155 KKGFDDIGKTISEIL 169 >gi|110004378|emb|CAK98716.1| probable gtp-binding protein era [Spiroplasma citri] Length = 294 Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 23/174 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++N K T+ A + S + +D Sbjct: 8 VAIVGRPNVGKSTLLNTILNNKVAIVTAKAQTTRNRIQGIYNDQESQI-------VFMDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG A + G + + LS + L + D+ + L ++A+ Sbjct: 61 PGIHKAH------NEMGKFMNKVALSATKAADVILFLAPANERIGDNDRYIIKALQERAI 114 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVL 202 +V+TKID +S I + H VIP S+VK K +E L Sbjct: 115 PIVLVVTKIDLVSKGDLM-------VKIAEWEKIHQFTAVIPVSAVKHKNLETL 161 >gi|47600617|emb|CAE55738.1| hypothetical protein YeeP [Escherichia coli Nissle 1917] Length = 303 Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust. Identities = 49/195 (25%), Positives = 77/195 (39%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 50 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 102 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 103 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 156 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ L R + HP V+ S+ Sbjct: 157 HQRVLFVVTQADKTEPCHEWDMAGIKPSPAQAQNIREKTEALFRLFRPVHP-VVAVSART 215 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 216 GWELDTLVSALMTAL 230 >gi|253996245|ref|YP_003048309.1| GTP-binding protein EngA [Methylotenera mobilis JLW8] gi|253982924|gb|ACT47782.1| small GTP-binding protein [Methylotenera mobilis JLW8] Length = 484 Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust. Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 15/136 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAM 86 P++A GR NVGKS+L+N L+ + + + PG T+ H+ +L+ N Sbjct: 180 PKVAIVGRPNVGKSTLVNALLGEERVI-AYDEPGTTRDSIHI---------DLEKNGKHY 229 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ + +++ + V L++D + G+ + D V +++ Sbjct: 230 TLIDTAGVRKRGRVFEAIEKFS--VIKTIQAIEEANVVILVVDAQEGITEQDAHVAAYIL 287 Query: 147 KKAVSYQIVLTKIDKL 162 + + + K D L Sbjct: 288 DAGRALVVAINKWDGL 303 >gi|163749553|ref|ZP_02156800.1| GTP-binding protein EngA [Shewanella benthica KT99] gi|161330663|gb|EDQ01600.1| GTP-binding protein EngA [Shewanella benthica KT99] Length = 492 Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+LIN ++ + + ++PG T+ + ++P + L Sbjct: 199 PIKLAIIGKPNVGKSTLINRILGEERVV-VYDSPGTTRD-SIYIP-----MVREGREYVL 251 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L+ID R G+ + D + F Sbjct: 252 IDTAGVRRRSKVNETVEKFS--VIKTLKAVEDCNVVLLIIDAREGITEQDLGLLGFALNA 309 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I + K D + QE ++ K Sbjct: 310 GRALVIAVNKWDGID----QEIKDRVK 332 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 + GY + +D I +++++S V L D R G+ D + Sbjct: 46 SLSGYEFIVVDTGGIDGTEEGIEVHMAQQSLAAIEEADVVLFLTDARAGLTAADHAIAEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L ++ + +V KID + +A Sbjct: 106 LRRRDKTTFVVANKIDGIDADSA 128 >gi|116629756|ref|YP_814928.1| GTP-binding protein Era [Lactobacillus gasseri ATCC 33323] gi|116095338|gb|ABJ60490.1| GTPase [Lactobacillus gasseri ATCC 33323] Length = 303 Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 18/175 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A S P T++ K ++ + +D Sbjct: 13 VALIGRPNVGKSTLLNFLVGQK-VAIMSPQPQTTRN------KISGIYTDDQEQIVFIDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK +D + + S + V +++ K DQ + L K Sbjct: 66 PGI---HKPKNKLDDF--MDKSSYSALDEVDVVLFMVEPEPAGKG-DQYIAELLKKIKKP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KIDK+ P ++ K L E++P S+ + + L K I Sbjct: 120 VFLVINKIDKVHPDKLLSIIDSYKNL-----GDFAEIVPISASQGNNVSELIKTI 169 >gi|71279565|ref|YP_270897.1| GTP-binding protein EngA [Colwellia psychrerythraea 34H] gi|123733686|sp|Q47WC5|DER_COLP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71145305|gb|AAZ25778.1| GTP-binding protein EngA [Colwellia psychrerythraea 34H] Length = 498 Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRSRD-ALVADYPGLTR------DRQYGQAEVEEHPFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G N D G I ++E+S + V L+D R G+ D + Sbjct: 56 DTGGI--------NGDEQG--IDVKMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L K+ +V KID + +A Sbjct: 106 LRKQNKKIFVVANKIDGIHGDSA 128 >gi|260061761|ref|YP_003194841.1| GTP-binding protein Era [Robiginitalea biformata HTCC2501] gi|88785893|gb|EAR17062.1| putative GTP-binding protein (cell growth-related) [Robiginitalea biformata HTCC2501] Length = 295 Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 23/174 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGY 94 G NVGKS+L+N LV + TS A R + L DF + ++ P + P Y Sbjct: 13 GNPNVGKSTLMNALVGERLSIITSKAQTTRHRILGIVNGDDFQIVFSDTPGII---KPAY 69 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 G + VR + + LL G K + + F+ +K S QI Sbjct: 70 GLQESMMD--------FVRL----ALVDADVLLYMVEVGEKGLKDEAFA---EKIRSSQI 114 Query: 155 -VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLRKAI 206 VL I+K+ + + E+ + +P A E+IP S+++R G+ EVL + + Sbjct: 115 PVLLLINKIDTSDQGQLEEQVAFWTEQFPNA--EIIPISALERFGVPEVLDRIL 166 >gi|194334612|ref|YP_002016472.1| GTP-binding protein EngA [Prosthecochloris aestuarii DSM 271] gi|238693304|sp|B4S433|DER_PROA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|194312430|gb|ACF46825.1| small GTP-binding protein [Prosthecochloris aestuarii DSM 271] Length = 436 Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 13/131 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSS +N L+ N SN PG T+ + K N + L+D Sbjct: 179 LAIIGRPNVGKSSFVNALLG-TNRNIVSNKPGTTRDAI------DTRFKRNGREIVLIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDKKA 149 G + +D+ +ER+ RC +LID G+++ D + ++ Sbjct: 232 AGL----RKRARIDAGIEFYSSLRTERAIERCDVALVLIDAEQGLEKQDMKIIEMAAERK 287 Query: 150 VSYQIVLTKID 160 +++ K D Sbjct: 288 KGVLLLVNKWD 298 >gi|107029013|ref|YP_626108.1| GTP-binding protein EngA [Burkholderia cenocepacia AU 1054] gi|116689829|ref|YP_835452.1| GTP-binding protein EngA [Burkholderia cenocepacia HI2424] gi|170733168|ref|YP_001765115.1| GTP-binding protein EngA [Burkholderia cenocepacia MC0-3] gi|123370031|sp|Q1BGX0|DER_BURCA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224312|sp|A0K7T2|DER_BURCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238688579|sp|B1JT88|DER_BURCC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|105898177|gb|ABF81135.1| Small GTP-binding protein domain protein [Burkholderia cenocepacia AU 1054] gi|116647918|gb|ABK08559.1| small GTP-binding protein [Burkholderia cenocepacia HI2424] gi|169816410|gb|ACA90993.1| small GTP-binding protein [Burkholderia cenocepacia MC0-3] Length = 445 Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGLDDHARDRAKADLTRKLKFL--DFAKSH----FISAAKKTGIGALMRSV 345 >gi|66819757|ref|XP_643537.1| hypothetical protein DDB_G0275751 [Dictyostelium discoideum AX4] gi|60471670|gb|EAL69626.1| hypothetical protein DDB_G0275751 [Dictyostelium discoideum AX4] Length = 994 Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 21/137 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR-TQHLNFF--VPKDFSNLKNNLPA 85 PP + G + GK+SL++ L ++ + N PGR TQH+ F + D S+ K A Sbjct: 457 PPVVTVVGHIDHGKTSLLDFL---RSTSVVDNEPGRITQHIGAFEVLINDRSDAKKAKRA 513 Query: 86 MALVDMPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +D PG+ ++ ++ V V L++ GV++ + Sbjct: 514 ITFMDTPGHSAFSTMRERGV--------------GITDIVLLVVAADDGVQEQTIEAIKA 559 Query: 145 LDKKAVSYQIVLTKIDK 161 + K V +V+ K+DK Sbjct: 560 IKKNDVQVIVVINKMDK 576 >gi|269792674|ref|YP_003317578.1| GTP-binding protein Era [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100309|gb|ACZ19296.1| GTP-binding protein Era [Thermanaerovibrio acidaminovorans DSM 6589] Length = 303 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 15/177 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N LV K +A + A + V D + LVD Sbjct: 10 VALLGRPNVGKSSLANALVGEKVMAVSPKAQTTRHAIRGIVQGDGYQI-------VLVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P+ ++ + +R E C +++ G+ +D+ V ++ + Sbjct: 63 PG---VHEPRHDLGRFMISQIRAALEDVCGIC-FVVDATSKGISSLDRRVLEWIQEAGRP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D L+ ++ L ++ V+P S+ + ++VL++A+++ Sbjct: 119 ALLCVNKVDLLA---RKDDFWDVVALYQDQ-YRFDAVVPVSATQGTNLDVLKEAMVK 171 >gi|227529194|ref|ZP_03959243.1| GTP-binding protein EngA [Lactobacillus vaginalis ATCC 49540] gi|227350919|gb|EEJ41210.1| GTP-binding protein EngA [Lactobacillus vaginalis ATCC 49540] Length = 437 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 13/164 (7%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDF 76 PE G + GR NVGKSSL+N ++ +N SN G T+ F KD Sbjct: 164 PETADNEDDGTIHFSLIGRPNVGKSSLVNAILG-ENRVIVSNVAGTTRDAINTRFTAKDG 222 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 ++D G +N + + ++R + V ++++ G+++ Sbjct: 223 REF-------TMIDTAGIRKKGKIYENTERYS--LMRSMRAIDDSDVVLVVLNAEEGIRE 273 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 +D+ + + + IV+ K D + T+ LIRN Sbjct: 274 LDKHIAGYAHEAGCGVIIVVNKWDTIK-NKDHRTMTDFTTLIRN 316 >gi|254481804|ref|ZP_05095047.1| putative GTPase [marine gamma proteobacterium HTCC2148] gi|214037933|gb|EEB78597.1| putative GTPase [marine gamma proteobacterium HTCC2148] Length = 314 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 10/70 (14%) Query: 34 FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 +G NVGKSSLINIL RK +A+T N P T+ L +D + L+D PG Sbjct: 119 ITGIPNVGKSSLINILAGRK-VAKTGNEPAITKGLQRIRIQD---------ELILLDTPG 168 Query: 94 YGYARAPKKN 103 + + +N Sbjct: 169 ILWPKIHNEN 178 >gi|225551948|ref|ZP_03772888.1| ribosome-associated GTPase EngA [Borrelia sp. SV1] gi|225370946|gb|EEH00376.1| ribosome-associated GTPase EngA [Borrelia sp. SV1] Length = 433 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 10/143 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V E G+ + ++ G+ N GKS+LIN L + +A S+ PG T+ F+ F+ Sbjct: 163 VGEAGI-ESSADIKVGIIGKPNSGKSTLINYLSGNE-IAIVSDQPGTTRD---FIKTKFT 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD G + V+ + + R L + V+LLID + + Sbjct: 218 R---NGKVFEVVDTAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVKEELTSQ 272 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ + ++ KK IV +K D Sbjct: 273 DKKIAHYVTKKGKGIIIVFSKWD 295 >gi|15643211|ref|NP_228255.1| hypothetical protein TM0445 [Thermotoga maritima MSB8] gi|4980952|gb|AAD35530.1|AE001722_14 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 404 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 36/195 (18%) Query: 24 LPKAGPPE-IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 LP AG I +GR NVGKSS +N LV +N++ S G T P S Sbjct: 3 LPDAGFRRYIVVAGRRNVGKSSFMNALVG-QNVSIVSEYAGTTTD-----PVYKSMELYP 56 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID---- 138 + + LVD PG +V G L V R V+ DC G+ D Sbjct: 57 VGPVTLVDTPGL-------DDVGELGRLRV------EKARRVFYRADC--GILVTDSEPT 101 Query: 139 ---QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 DV + + + + +V+ KID L E E+ K L + A +V+ S+++ Sbjct: 102 PYEDDVVNLFKEMEIPFVVVVNKIDVLG-----EKAEELKGLYESRYEA--KVLLVSALQ 154 Query: 196 RKGIEVLRKAILETI 210 +KG + + K I E + Sbjct: 155 KKGFDDIGKTISEIL 169 >gi|329565809|gb|AEB92241.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] Length = 404 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 191 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 243 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 244 GI---RDTDELVEKIG--VAKSKEVLAEADLILFVLDASRELTKEDYEIFDILVGKNIVF 298 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 VL KID +E TK I +I S+V++ G++ L I Sbjct: 299 --VLNKIDLPKKIDEKELKNLTKDGI---------IIEVSTVEKIGLQELEDTI 341 >gi|283458469|ref|YP_003363095.1| GTPase [Rothia mucilaginosa DY-18] gi|283134510|dbj|BAI65275.1| GTPase [Rothia mucilaginosa DY-18] Length = 571 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A +G +N GKSSL+N L + L + F D + K P Sbjct: 317 PSVAIAGYTNAGKSSLLNRLTDAGVLVENA----------LFATLDPTVRKAQTP----- 361 Query: 90 DMPGY------GYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH----GVKQID 138 D GY G+ R+ P + V+++ L E + + ++D H G + Sbjct: 362 DGIGYTLSDTVGFVRSLPTQLVEAFRS----TLEEVADADVILHVVDASHPDPEGQIRAV 417 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++V + +D + + IVL K D P +++ PE + S+ +G Sbjct: 418 REVIAEVDARHIPEIIVLNKADAADP-----------FVLERMRQREPEHVIVSARTGEG 466 Query: 199 IEVLRKAILETI 210 IE L++ I +TI Sbjct: 467 IEELKQKIADTI 478 >gi|152993507|ref|YP_001359228.1| GTP-binding protein EngA [Sulfurovum sp. NBC37-1] gi|151425368|dbj|BAF72871.1| GTP-binding protein, Era/ThdF family [Sulfurovum sp. NBC37-1] Length = 467 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 10/144 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKSSL+N L+ + + S+ G T P D +++N + VD Sbjct: 205 VAIIGRVNTGKSSLLNALLGEER-SVVSDVAGTT-----IDPID-ETIEHNDYEITFVDT 257 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R+ ++ + + E++ + L+ID GV ++D+ V ++K +S Sbjct: 258 AGI-RKRSKIVGIEKYALGRTEAMLEKADIAL--LIIDATVGVTELDERVAGLIEKFRLS 314 Query: 152 YQIVLTKIDKLSPTTAQETLEKTK 175 IV+ K D T +E ++ + Sbjct: 315 ALIVINKWDIRGEKTYEEAVDDIR 338 >gi|148240343|ref|YP_001225730.1| GTPase [Synechococcus sp. WH 7803] gi|147848882|emb|CAK24433.1| GTPase [Synechococcus sp. WH 7803] Length = 438 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 16/130 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT-QHLNFFVPKDFSNLKNNLPAMALVD 90 IA GR VGKSSL+N LV ++L T A G T Q + PK L+ + LVD Sbjct: 52 IAVFGRVGVGKSSLVNALVG-QSLMATDVAHGCTRQQQSTPWPKPVPGLQG----VDLVD 106 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG P + L+ R + +L+ + QI+ D + L K Sbjct: 107 TPGIDEVDGPARA----------RLAGRVAMNADLVLLVLDGDITQIELDALATLQTKGK 156 Query: 151 SYQIVLTKID 160 VL + D Sbjct: 157 PVLTVLNRSD 166 >gi|123966856|ref|YP_001011937.1| GTPase SAR1 and related small G proteins [Prochlorococcus marinus str. MIT 9515] gi|123201222|gb|ABM72830.1| GTPase SAR1 and related small G proteins [Prochlorococcus marinus str. MIT 9515] Length = 413 Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 6/73 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G++ VGKSS++N+L+N+ +T G T+++ K++S NL + L+D Sbjct: 51 IGIYGKAGVGKSSILNLLLNKHEF-KTDIINGSTKNIE---KKEWSLKFQNLKTIELIDS 106 Query: 92 PGYGYA--RAPKK 102 PG+ + + P+K Sbjct: 107 PGFDFCDIKDPEK 119 >gi|302823429|ref|XP_002993367.1| hypothetical protein SELMODRAFT_137012 [Selaginella moellendorffii] gi|300138798|gb|EFJ05552.1| hypothetical protein SELMODRAFT_137012 [Selaginella moellendorffii] Length = 597 Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 7/66 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP I G + GK+SL++ L RK+ A G TQHL FV K S ++ Sbjct: 72 PPVITVMGHVDHGKTSLLDAL--RKSSVAAGEAGGITQHLGAFVVKMSSG-----ASLTF 124 Query: 89 VDMPGY 94 +D PG+ Sbjct: 125 LDTPGH 130 >gi|261405616|ref|YP_003241857.1| GTP-binding protein Era [Paenibacillus sp. Y412MC10] gi|261282079|gb|ACX64050.1| GTP-binding protein Era [Paenibacillus sp. Y412MC10] Length = 300 Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust. Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 25/166 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAMAL 88 +A GR NVGKS+L+N ++ +K +A S+ P T+ H + P + Sbjct: 11 VAIIGRPNVGKSTLMNQVIGQK-IAIMSDKPQTTRNKIHGVYTTPDS---------QVVF 60 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D PG K G + + LS + L+D G+ D+ + L K Sbjct: 61 LDTPGI------HKRQSKLGDYMNQTALSTLGEVEAALFLVDASEGIGGGDRYIAEQLQK 114 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +V+ KIDK+ P +E+ + L E++P S+ Sbjct: 115 IKTPIILVMNKIDKIEPPALLPLIEQYRKL-----HDFAEIVPISA 155 >gi|224535653|ref|ZP_03676192.1| hypothetical protein BACCELL_00517 [Bacteroides cellulosilyticus DSM 14838] gi|224522726|gb|EEF91831.1| hypothetical protein BACCELL_00517 [Bacteroides cellulosilyticus DSM 14838] Length = 407 Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 77/190 (40%), Gaps = 31/190 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A IA GR N GKSSL+N L + + S PG T P + + L Sbjct: 19 PNANRLHIALFGRRNSGKSSLVNALTGQDTVI-VSPTPGTTTD-----PVTKAMEIHPLG 72 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV----YLLIDCRHGVKQIDQD 140 L+D PG+ D G L + TL+ + L+ C G Q +Q+ Sbjct: 73 PCLLIDTPGF----------DDEGEL--GEMRVERTLKIIGKTDIALLLCETGDAQ-EQE 119 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L ++ + ++L K D TT E E+ K P +I S+ GIE Sbjct: 120 WLQRLKERGIPVILLLNKADARPNTT--ELAEQIK-----ASCGQPPII-VSAKDGTGIE 171 Query: 201 VLRKAILETI 210 + +AILE + Sbjct: 172 AIHRAILEKL 181 >gi|149200553|ref|ZP_01877562.1| GTP-binding protein [Lentisphaera araneosa HTCC2155] gi|149136350|gb|EDM24794.1| GTP-binding protein [Lentisphaera araneosa HTCC2155] Length = 487 Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 13/137 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKSSL N L+ RK +A G T+ P ++ + LV Sbjct: 11 PVVTIVGRPNVGKSSLFNTLL-RKRIAIVHEQCGVTRD-RVAQPVSWNGYR-----YQLV 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLS---ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G G + +KNV+ I L E S + + +L D + G+ ++D++V +FL Sbjct: 64 DTGGLGVL-SDEKNVEFMDEKIRMQLKVAVESSDI--LIMLTDVKDGITELDREVCAFLR 120 Query: 147 KKAVSYQIVLTKIDKLS 163 K + + K D Sbjct: 121 KHDKPIILAVNKCDNFE 137 >gi|189467139|ref|ZP_03015924.1| hypothetical protein BACINT_03523 [Bacteroides intestinalis DSM 17393] gi|189435403|gb|EDV04388.1| hypothetical protein BACINT_03523 [Bacteroides intestinalis DSM 17393] Length = 393 Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 77/190 (40%), Gaps = 31/190 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A IA GR N GKSSL+N L + + S PG T P + + L Sbjct: 5 PNANRLHIALFGRRNSGKSSLVNALTGQDTVI-VSPTPGTTTD-----PVTKAMEIHPLG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV----YLLIDCRHGVKQIDQD 140 L+D PG+ D G L + TL+ + L+ C G Q +Q+ Sbjct: 59 PCLLIDTPGF----------DDEGEL--GEMRVECTLKIIGKTDIALLLCETGDAQ-EQE 105 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L ++ + ++L K D TT E E+ K P +I S+ GIE Sbjct: 106 WLQRLKERGIPVILLLNKADARPNTT--ELAEQIK-----ASCGQPPII-ISAKDGTGIE 157 Query: 201 VLRKAILETI 210 + +AILE + Sbjct: 158 AIHRAILEKL 167 >gi|170584925|ref|XP_001897241.1| hypothetical protein [Brugia malayi] gi|158595365|gb|EDP33925.1| conserved hypothetical protein [Brugia malayi] Length = 614 Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 10/65 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + G NVGKSS IN L++RK ++ S PG+T+HL V + + L Sbjct: 347 PFVVGMVGYPNVGKSSTINKLLDRKKVS-VSATPGKTRHLQTLVVDE---------ELTL 396 Query: 89 VDMPG 93 D PG Sbjct: 397 CDCPG 401 >gi|82703488|ref|YP_413054.1| GTP-binding protein EngA [Nitrosospira multiformis ATCC 25196] gi|123768150|sp|Q2Y6F9|DER_NITMU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|82411553|gb|ABB75662.1| Small GTP-binding protein domain [Nitrosospira multiformis ATCC 25196] Length = 466 Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA GR NVGKS+L+N L+ + + + PG T+ + + + N L+ Sbjct: 176 PKIAIVGRPNVGKSTLVNTLLGEERVI-AFDQPGTTRDSIYI------DFERNGRTYTLI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + +V+ L V L++D + D + F+ + Sbjct: 229 DTAGLRRRGKVQETVEKFS--VVKTLQAIEDANVVILVLDAASEISDQDAHIGGFILEAG 286 Query: 150 VSYQIVLTKIDKLS 163 + + + K D L Sbjct: 287 RALVLAVNKWDSLD 300 >gi|302781957|ref|XP_002972752.1| hypothetical protein SELMODRAFT_98506 [Selaginella moellendorffii] gi|300159353|gb|EFJ25973.1| hypothetical protein SELMODRAFT_98506 [Selaginella moellendorffii] Length = 597 Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 7/66 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP I G + GK+SL++ L RK+ A G TQHL FV K S ++ Sbjct: 72 PPVITVMGHVDHGKTSLLDAL--RKSSVAAGEAGGITQHLGAFVVKMSSG-----ASLTF 124 Query: 89 VDMPGY 94 +D PG+ Sbjct: 125 LDTPGH 130 >gi|298714676|emb|CBJ27601.1| PYlqF, plastid YlqF/RbgA-like GTPase [Ectocarpus siliculosus] Length = 542 Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 7/74 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF--FVPKDFSNLKNNLPAMALV 89 +A G NVGKS+LIN L+ +K +A++ N PG T+ +N+ KD +N + L+ Sbjct: 301 VAVIGFPNVGKSALINRLIGKK-VAKSMNKPGVTKKMNWVRLGGKDTKPEQN----LELL 355 Query: 90 DMPGYGYARAPKKN 103 D PG AR +N Sbjct: 356 DSPGIIPARQEDQN 369 >gi|197303809|ref|ZP_03168845.1| hypothetical protein RUMLAC_02548 [Ruminococcus lactaris ATCC 29176] gi|197297102|gb|EDY31666.1| hypothetical protein RUMLAC_02548 [Ruminococcus lactaris ATCC 29176] Length = 417 Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 62/149 (41%), Gaps = 22/149 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A P I F G N GKSS++N V +NLA SN G T LP Sbjct: 7 PAAERPHIGFFGCRNAGKSSIVN-AVTGQNLAVVSNVKGTTTD-------PVVKAMELLP 58 Query: 85 A--MALVDMPGYGYARAPKKNVDSWGGLIVR---YLSERSTLRCVYLLIDCRHGVKQIDQ 139 A + ++D PG + G L V + R+ L V +ID G+K+ D Sbjct: 59 AGPVVMIDTPGI-------DDDGELGKLRVEKSYQMLNRTDLAIV--VIDGGTGIKKEDF 109 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 + ++K+ V + I + K D L Q Sbjct: 110 ALLKEIEKRKVPFIIAVNKSDLLKEHRIQ 138 >gi|302386768|ref|YP_003822590.1| small GTP-binding protein [Clostridium saccharolyticum WM1] gi|302197396|gb|ADL04967.1| small GTP-binding protein [Clostridium saccharolyticum WM1] Length = 398 Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 18/143 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GR N GKSS++N V + L+ S G T V K L + + ++D Sbjct: 14 IGFFGRRNAGKSSVVNA-VTGQELSVVSEVKGTTTDP---VYKSMELLP--MGPVVIIDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG+ + + G + VR + RS C L++D G + D+++ +K Sbjct: 68 PGF-------DDEGALGEMRVRKTKQILNRSD--CAVLVVDGAAGKTKTDEELIHLFQEK 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETL 171 + Y + K D T ++ L Sbjct: 119 KIPYVVAYNKCDLTGEQTYEDGL 141 >gi|302889213|ref|XP_003043492.1| hypothetical protein NECHADRAFT_102212 [Nectria haematococca mpVI 77-13-4] gi|256724409|gb|EEU37779.1| hypothetical protein NECHADRAFT_102212 [Nectria haematococca mpVI 77-13-4] Length = 963 Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats. Identities = 18/30 (60%), Positives = 23/30 (76%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + F G S VGKSSL+N L++ K LARTSN+ Sbjct: 198 VGFVGDSGVGKSSLLNSLLDVKGLARTSNS 227 >gi|254252261|ref|ZP_04945579.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158] gi|124894870|gb|EAY68750.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158] Length = 445 Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L + V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSIADANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQ----ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGLDEHARERAKADLTRKLKFL--DFAKSH----FISAAKKTGIGALMRSV 345 >gi|15225856|ref|NP_180288.1| GTP-binding family protein [Arabidopsis thaliana] gi|4646218|gb|AAD26884.1| putative nucleotide-binding protein [Arabidopsis thaliana] gi|63003826|gb|AAY25442.1| At2g27200 [Arabidopsis thaliana] gi|330252858|gb|AEC07952.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] Length = 537 Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV +K TS PG+T+H + + + L D Sbjct: 307 VGFVGYPNVGKSSTINALVGQKRTGVTST-PGKTKHFQTLIISE---------DLMLCDC 356 Query: 92 PG 93 PG Sbjct: 357 PG 358 >gi|322388795|ref|ZP_08062392.1| ribosome-associated GTPase EngA [Streptococcus infantis ATCC 700779] gi|321140414|gb|EFX35922.1| ribosome-associated GTPase EngA [Streptococcus infantis ATCC 700779] Length = 436 Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 172 PDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDADGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++N+ Sbjct: 284 EAGKGMIIVVNKWD---------TLEKDNHTMKNW 309 >gi|300776276|ref|ZP_07086134.1| ribosome-associated GTPase EngA [Chryseobacterium gleum ATCC 35910] gi|300501786|gb|EFK32926.1| ribosome-associated GTPase EngA [Chryseobacterium gleum ATCC 35910] Length = 436 Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 13/138 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVN-RKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P G P+I +GR NVGKS+L N L++ +N+ ++ G T+ L N Sbjct: 171 PFEGLPKITIAGRPNVGKSTLTNALLDVERNIV--TDIAGTTRD-------SIQTLYNKF 221 Query: 84 P-AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 LVD G R K N D ++R + V +++D G + D ++F Sbjct: 222 GHEFVLVDTA--GMRRKSKVNEDLEFYSVMRSIRSIEYSDVVIIMVDATQGWESQDMNIF 279 Query: 143 SFLDKKAVSYQIVLTKID 160 K I++ K D Sbjct: 280 GLAQKNRKGIVILVNKWD 297 >gi|313675601|ref|YP_004053597.1| tRNA modification GTPase trme [Marivirga tractuosa DSM 4126] gi|312942299|gb|ADR21489.1| tRNA modification GTPase trmE [Marivirga tractuosa DSM 4126] Length = 457 Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 91/195 (46%), Gaps = 31/195 (15%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 ++G + K G P + +G+ N GKS+L+N L+N + A S+ G T +DF Sbjct: 213 DLGNVIKNGVPTV-IAGKPNTGKSTLLNALLNEEK-AIVSDIAGTT--------RDFIED 262 Query: 80 KNNLPAMA--LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG-VKQ 136 + NL + +D G R + V++ G + R + + + D ++ + + Sbjct: 263 EINLEGVVFRFIDTAGL---RDTEDKVEAIG--VQRTKDKMKQASLIVYMFDLKNDTLTE 317 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 +++D+ + L+ + + V K+D+ AQ+ L N + S++ + Sbjct: 318 VNRDI-NMLENLGIPFIKVGNKLDE-----AQQDL-------YNEMKKDKNTLFISAINK 364 Query: 197 KGIEVLRKAILETIN 211 +G+E L+ ++ET+N Sbjct: 365 EGLEALKTKLVETVN 379 >gi|257223033|gb|ACV52787.1| GTP-binding protein [Oryza barthii] Length = 301 Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K T + PG+T+H + + + L D Sbjct: 95 VGFVGYPNVGKSSTINALVGEKKTGVT-HTPGKTKHFQTLIISE---------ELTLCDC 144 Query: 92 PG 93 PG Sbjct: 145 PG 146 >gi|219850590|ref|YP_002465023.1| GTP-binding protein EngA [Chloroflexus aggregans DSM 9485] gi|254783144|sp|B8GAY7|DER_CHLAD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219544849|gb|ACL26587.1| small GTP-binding protein [Chloroflexus aggregans DSM 9485] Length = 449 Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 13/134 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N L+ K + S PG T+ P D + P + L+D Sbjct: 185 VAIVGRPNVGKSSLLNRLLG-KERSVVSPIPGTTRD-----PIDTTITYYGEP-ITLIDT 237 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDKKA 149 G A ++ ++ + ++R L R+ RC LL+D GV D + + + Sbjct: 238 AGIRRAGKIERGIEKYS--VLRTL--RAIERCDVAMLLVDATEGVTAQDTHIAGMVIEAK 293 Query: 150 VSYQIVLTKIDKLS 163 +V+ K D ++ Sbjct: 294 KGLILVVNKWDAIT 307 >gi|26247146|ref|NP_753186.1| hypothetical protein c1272 [Escherichia coli CFT073] gi|227888003|ref|ZP_04005808.1| possible GTP-binding protein [Escherichia coli 83972] gi|26107547|gb|AAN79746.1|AE016759_20 Hypothetical protein yeeP [Escherichia coli CFT073] gi|227834999|gb|EEJ45465.1| possible GTP-binding protein [Escherichia coli 83972] gi|307553020|gb|ADN45795.1| conserved hypothetical protein containing GTP-binding domain [Escherichia coli ABU 83972] Length = 290 Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ L R + HP V+ S+ Sbjct: 144 HQRVLFVVTQADKTEPCHEWDMAGIKPSPAQAQNIREKTEALFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|317502138|ref|ZP_07960316.1| GTP-binding protein Era [Lachnospiraceae bacterium 8_1_57FAA] gi|331090350|ref|ZP_08339233.1| GTP-binding protein Era [Lachnospiraceae bacterium 3_1_46FAA] gi|316896455|gb|EFV18548.1| GTP-binding protein Era [Lachnospiraceae bacterium 8_1_57FAA] gi|330401305|gb|EGG80893.1| GTP-binding protein Era [Lachnospiraceae bacterium 3_1_46FAA] Length = 298 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 21/183 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ + + L + VD Sbjct: 10 VTLIGRPNVGKSTLMNHLIGQK-IAITSNKPQTTRN------RIQTVLTTEEGQIVFVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + G +V ++ERS + V L++ + D+ + L K Sbjct: 63 PGIHKAK------NKLGEYMVN-IAERSLNEVDVVLWLVEPSAFIGAGDRHIIEQLKKVK 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KID + +E L + Y A E++P S+ + L K IL+ Sbjct: 116 TPVVLVINKIDMVK---KEEILTFIDAYRKEYDFA--EIVPVSARSGDNTDELIKVILKY 170 Query: 210 INY 212 + Y Sbjct: 171 LPY 173 >gi|254586719|ref|XP_002498927.1| ZYRO0G21824p [Zygosaccharomyces rouxii] gi|238941821|emb|CAR29994.1| ZYRO0G21824p [Zygosaccharomyces rouxii] Length = 637 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 14/85 (16%) Query: 13 IFLRGVPEIGLLPK--AGPP--EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +FL P L P PP +I G NVGKSS IN LV K ++ S+ PG+T+H Sbjct: 314 LFLEKAPNEPLRPPLPGQPPLIQIGMVGYPNVGKSSTINSLVGAKKVS-VSSTPGKTKHF 372 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPG 93 D ++ L D PG Sbjct: 373 QTIKLSD---------SVMLCDCPG 388 >gi|296452686|ref|ZP_06894377.1| tRNA modification GTPase TrmE [Clostridium difficile NAP08] gi|296880062|ref|ZP_06904031.1| tRNA modification GTPase TrmE [Clostridium difficile NAP07] gi|296258468|gb|EFH05372.1| tRNA modification GTPase TrmE [Clostridium difficile NAP08] gi|296428929|gb|EFH14807.1| tRNA modification GTPase TrmE [Clostridium difficile NAP07] Length = 462 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N ++ +N A ++ PG T+ V ++F N+K +P + +VD G Sbjct: 231 GKPNVGKSSLLNSILG-ENRAIVTDIPGTTRD----VIEEFVNIK-GIP-LKIVDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R V+ G + R ++ + +++D + + D ++ L K IV Sbjct: 283 --RDTDDIVEKIG--VERSKESFTSADLIVMVLDASRKLSEEDIEILEKLKDKQT---IV 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L + L +E + KY+ N +I S+++++GIE L+ I Sbjct: 336 LLNKNDLKQEIEEEKI--LKYVENN------SIIKISALQQEGIEELQDKI 378 >gi|253583507|ref|ZP_04860705.1| ferrous iron transporter B [Fusobacterium varium ATCC 27725] gi|251834079|gb|EES62642.1| ferrous iron transporter B [Fusobacterium varium ATCC 27725] Length = 731 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 41/188 (21%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++AF+G NVGKS+LIN + K + N PG T V K + + LVD Sbjct: 3 KLAFTGNPNVGKSALINAIAGSK--LKVGNWPGVT------VEKKEAIFNYKGEEIKLVD 54 Query: 91 MPGYGYARAPKK---------NVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 +PG Y+ +P +D ++V + + R +YL + +K++++ Sbjct: 55 LPGV-YSLSPYTLEEKITRDFILDESPDVVVNVIDSTNLERNLYL----TYLLKELEKPT 109 Query: 142 FSFLDKKAVSYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 A+++ TK++ KL+ QE +E + IP S++K GIE Sbjct: 110 I-----MALNFYDEFTKLNYKLNLEEFQELIEL-------------KAIPVSALKGTGIE 151 Query: 201 VLRKAILE 208 L +I+E Sbjct: 152 ELLDSIIE 159 >gi|269864219|ref|XP_002651496.1| GTPase, predicted [Enterocytozoon bieneusi H348] gi|220064416|gb|EED42560.1| GTPase, predicted [Enterocytozoon bieneusi H348] Length = 377 Score = 38.1 bits (87), Expect = 0.78, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 22/128 (17%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 L + ++ L + I F G N+GKSSLINIL N K + + + PG T+ + Sbjct: 254 LLNVIRQLKTLYRKRTMSIGFVGYPNIGKSSLINILKN-KQVCKVAPIPGETKVWQYITL 312 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLI----------VRYLSERSTLRC 123 + + L+D PG + K+ SW G + R ++ L Sbjct: 313 ---------MKDVYLIDSPGVVHNYLKKQY--SWCGRVNLRSDSCAEFYRLFMNQNVLLI 361 Query: 124 VYLLIDCR 131 Y + DC+ Sbjct: 362 EYHIYDCK 369 >gi|317504953|ref|ZP_07962902.1| ribosome-associated GTPase EngA [Prevotella salivae DSM 15606] gi|315663945|gb|EFV03663.1| ribosome-associated GTPase EngA [Prevotella salivae DSM 15606] Length = 437 Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust. Identities = 47/200 (23%), Positives = 79/200 (39%), Gaps = 30/200 (15%) Query: 21 IGLLPKAGP-------PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHL 68 I LP+ P P A GR N GKSS+IN + +A T+ T++ Sbjct: 160 IDKLPQENPESVEEEIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYD 219 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 F DF LVD G ++++ + ++R + L++ Sbjct: 220 KFGF--DF----------YLVDTAGIRRKNKVSEDLEFYS--VMRSIRAIENSDVCILML 265 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AH 185 D GV+ D ++F + K S +V+ K D L +Q+ + + IRN Sbjct: 266 DATRGVEAQDMNIFQLIQKNKKSLVVVVNKWD-LVEDKSQKAINTFEAAIRNRMAPFVDF 324 Query: 186 PEVIPTSSVKRKGIEVLRKA 205 P + ++ K++ VL A Sbjct: 325 PIIFASALTKQRIFRVLETA 344 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 17/135 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRR-AIVSDTAGTTRD------RQYGKCSWNSKEFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL---SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G+ + D + I R + +E + L V L+D GV D+DV L + Sbjct: 58 GGWVV-----NSDDIFEDAIRRQVLVATEEADL--VLFLVDVSTGVTDWDEDVAMILRRA 110 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D S Sbjct: 111 KLPVILVANKVDNNS 125 >gi|197287292|ref|YP_002153164.1| ATP/GTP-binding protein [Proteus mirabilis HI4320] gi|194684779|emb|CAR46827.1| putative ATP/GTP-binding protein [Proteus mirabilis HI4320] Length = 287 Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 19/147 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G++ GKSSLIN L + L+ S+ G T+ + FS + NN + V Sbjct: 31 PTIGLMGKTGAGKSSLINALF-QSTLSPVSDVSGCTRQ-----AQRFSMVMNN-HTLTFV 83 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PG G + + + L L E L + ++ D+ + FL K+ Sbjct: 84 DLPGVGESLERDR---EYHQLYRNLLPE---LDLIIWVLKADDRAWSSDEQCYRFLTKQC 137 Query: 150 VSYQ-----IVLTKIDKLSPTTAQETL 171 YQ VL + DK+ P + L Sbjct: 138 -GYQSERFLFVLNQADKIEPCRQWDEL 163 >gi|76800944|ref|YP_325952.1| GTP-binding protein [Natronomonas pharaonis DSM 2160] gi|76556809|emb|CAI48383.1| GTP-binding protein [Natronomonas pharaonis DSM 2160] Length = 327 Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 12/79 (15%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L+ +P+I +A P I +G NVGKSS +N + N +N T+ P T +N Sbjct: 152 LKTLPDI----RADEPAIVVAGYPNVGKSSFVNTVTNARN--ETAAYPFTTTEIN----- 200 Query: 75 DFSNLKNNLPAMALVDMPG 93 ++++N L+D PG Sbjct: 201 -VGHVEDNHVRYQLIDTPG 218 >gi|291287434|ref|YP_003504250.1| GTP-binding protein Era [Denitrovibrio acetiphilus DSM 12809] gi|290884594|gb|ADD68294.1| GTP-binding protein Era [Denitrovibrio acetiphilus DSM 12809] Length = 295 Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 18/100 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 I+ GR NVGKS+L+N L+ K +A TS+ P T+ +DF + + Sbjct: 9 ISIMGRPNVGKSTLLNALMGEK-IAITSSKPQTTRANIQGILTGEDFQ--------LIFI 59 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLI 128 D PGY A+ DS ++V+ E + +Y+L+ Sbjct: 60 DTPGYHKAK------DSINKMMVQQAKESLEAVDAIYVLV 93 >gi|255657633|ref|ZP_05403042.1| tRNA modification GTPase TrmE [Clostridium difficile QCD-23m63] Length = 459 Score = 38.1 bits (87), Expect = 0.80, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N ++ +N A ++ PG T+ V ++F N+K +P + +VD G Sbjct: 228 GKPNVGKSSLLNSILG-ENRAIVTDIPGTTRD----VIEEFVNIK-GIP-LKIVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R V+ G + R ++ + +++D + + D ++ L K IV Sbjct: 280 --RDTDDIVEKIG--VERSKESFTSADLIVMVLDASRKLSEEDIEILEKLKDKQT---IV 332 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L + L +E + KY+ N +I S+++++GIE L+ I Sbjct: 333 LLNKNDLKQEIEEEKI--LKYVENN------SIIKISALQQEGIEELQDKI 375 >gi|255326352|ref|ZP_05367436.1| small GTP-binding protein [Rothia mucilaginosa ATCC 25296] gi|255296569|gb|EET75902.1| small GTP-binding protein [Rothia mucilaginosa ATCC 25296] Length = 570 Score = 38.1 bits (87), Expect = 0.81, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 41/192 (21%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A +G +N GKSSL+N L + L + F D + K P Sbjct: 316 PSVAIAGYTNAGKSSLLNRLTDAGVLVENA----------LFATLDPTVRKAQTP----- 360 Query: 90 DMPGY------GYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH----GVKQID 138 D GY G+ R+ P + V+++ L E + + ++D H G + Sbjct: 361 DGIGYTLSDTVGFVRSLPTQLVEAFRS----TLEEVADADVILHVVDASHPDPEGQIRAV 416 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++V + +D + + IVL K D P +++ PE + S+ +G Sbjct: 417 REVIAEVDARHIPEIIVLNKADAADP-----------FVLERMRQREPEHVIVSARTGEG 465 Query: 199 IEVLRKAILETI 210 IE L++ I +TI Sbjct: 466 IEELKQKIADTI 477 >gi|237800048|ref|ZP_04588509.1| GTP-binding protein Der [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022903|gb|EGI02960.1| GTP-binding protein Der [Pseudomonas syringae pv. oryzae str. 1_6] Length = 222 Score = 38.1 bits (87), Expect = 0.81, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 32/185 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A + G T+ + + K + L+ Sbjct: 3 PVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRD------RQYGEAKWQGRSYILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + D G + ++E+S L V L+D R G DQ + Sbjct: 56 DTGGI--------SGDEHG--MDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLR 203 L K+ +V KID + E L + ++ P + IP + +GI ++L Sbjct: 106 LRKRNKRSYVVANKIDNID-----ENLARAEF----SPMGLGDAIPVAGAHGRGISQMLE 156 Query: 204 KAILE 208 A+ E Sbjct: 157 IALRE 161 >gi|115292012|gb|AAI22380.1| LOC563225 protein [Danio rerio] Length = 372 Score = 38.1 bits (87), Expect = 0.81, Method: Compositional matrix adjust. Identities = 15/34 (44%), Positives = 25/34 (73%) Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 LI Y ++ PEVIP S++K++G+E L++ I E + Sbjct: 266 LIEGYESSDPEVIPISALKQRGLEALKEKIEEAV 299 >gi|88799909|ref|ZP_01115481.1| predicted GTPase [Reinekea sp. MED297] gi|88777340|gb|EAR08543.1| predicted GTPase [Reinekea sp. MED297] Length = 458 Score = 38.1 bits (87), Expect = 0.81, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 9/132 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ + + PG T + ++P + + A L+D Sbjct: 179 LAIIGRPNVGKSTLVNRMLGEDRVV-VYDHPGTTMD-SIYIP-----YERHGKAYTLIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + V+ + IV+ L V L+ID + G+ D + F + + Sbjct: 232 AGVRRRKNITEAVEKFS--IVKTLQAIQDANVVVLVIDAQDGLVDQDMHMLGFALESGRA 289 Query: 152 YQIVLTKIDKLS 163 I + K D LS Sbjct: 290 LVIAINKWDGLS 301 >gi|332294983|ref|YP_004436906.1| ribosome-associated GTPase EngA [Thermodesulfobium narugense DSM 14796] gi|332178086|gb|AEE13775.1| ribosome-associated GTPase EngA [Thermodesulfobium narugense DSM 14796] Length = 425 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 10/66 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ--HLNFFVPKDFSNLKNNLPAMA 87 P + +GR+NVGKS+L N L+ +++ + S+ PG T+ H F D + A+ Sbjct: 5 PIVVLAGRANVGKSTLFNRLL-KQSYSMVSSVPGTTRDFHEGIFRYTDST-------AIT 56 Query: 88 LVDMPG 93 LVD+PG Sbjct: 57 LVDLPG 62 >gi|320093654|ref|ZP_08025534.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 178 str. F0338] gi|319979402|gb|EFW10884.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 178 str. F0338] Length = 503 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 39/190 (20%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG----RTQHLNFFVPKDFSNLKN 81 + G P +A GR NVGKS+L+N ++ R+ A + PG R + + +DF+ Sbjct: 64 RPGLPVLAVVGRPNVGKSTLVNRVLGRRE-AVVQDTPGVTRDRVSYPAEWAGRDFT---- 118 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST-----LRCVYLLIDCRHGVKQ 136 LVD G+ VD G + R ++E++ V L++D GV Sbjct: 119 ------LVDTGGW--------EVDVKG--LDRSVAEQAETAVDLADAVVLVLDATVGVTA 162 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + + L K + K+D + QE YL + E P S++ Sbjct: 163 SDERIVTMLRAKRKPVVLAANKVD----SAVQEA--DAAYL---WGLGMGEPHPVSALHG 213 Query: 197 KGIEVLRKAI 206 +G+ L A+ Sbjct: 214 RGVGDLLDAV 223 >gi|229829020|ref|ZP_04455089.1| hypothetical protein GCWU000342_01105 [Shuttleworthia satelles DSM 14600] gi|229792183|gb|EEP28297.1| hypothetical protein GCWU000342_01105 [Shuttleworthia satelles DSM 14600] Length = 441 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 10/146 (6%) Query: 19 PEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE +L + P IA G+ NVGKSSLIN L ++ L S+ G T+ + Sbjct: 166 PEPDILDREDDTPRIAVVGKPNVGKSSLINRLCGKQRLI-VSDIAGTTRDAV------DT 218 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ N VD G + +++ + IVR ++ V L+ID GV + Sbjct: 219 RVRFNKKDYIFVDTAGLRRKSRIQGDIERYS--IVRAVAAVEKADVVVLVIDGAEGVSEQ 276 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLS 163 D + ++ + I + K D + Sbjct: 277 DAKIAGIAHERGKAVIIAVNKWDAVE 302 >gi|224104611|ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|222849908|gb|EEE87455.1| predicted protein [Populus trichocarpa] Length = 603 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV +K TS PG+T+H + + + L D Sbjct: 323 VGFVGYPNVGKSSTINALVGQKRTGVTS-TPGKTKHFQTLIMSE---------KLTLCDC 372 Query: 92 PG 93 PG Sbjct: 373 PG 374 >gi|148269615|ref|YP_001244075.1| small GTP-binding protein [Thermotoga petrophila RKU-1] gi|170288291|ref|YP_001738529.1| small GTP-binding protein [Thermotoga sp. RQ2] gi|147735159|gb|ABQ46499.1| small GTP-binding protein [Thermotoga petrophila RKU-1] gi|170175794|gb|ACB08846.1| small GTP-binding protein [Thermotoga sp. RQ2] Length = 404 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 36/195 (18%) Query: 24 LPKAGPPE-IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 LP AG I +GR NVGKSS +N LV +N++ S G T P S Sbjct: 3 LPDAGFRRYIVVAGRRNVGKSSFMNALVG-QNVSIVSEYAGTTTD-----PVYKSMELYP 56 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID---- 138 + + LVD PG +V G L V R V+ DC G+ D Sbjct: 57 VGPVTLVDTPGL-------DDVGELGRLRV------EKARRVFYRADC--GILVTDSEPT 101 Query: 139 ---QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 DV + + + + +V+ KID L E E+ K L + A +V+ S+++ Sbjct: 102 PYEDDVVNLFKEMEIPFVVVVNKIDVLG-----EKAEELKGLYESRYEA--KVLLVSALQ 154 Query: 196 RKGIEVLRKAILETI 210 +KG + + K I E + Sbjct: 155 KKGFDDIGKTISEIL 169 >gi|260434834|ref|ZP_05788804.1| ribosome-associated GTPase EngA [Synechococcus sp. WH 8109] gi|260412708|gb|EEX06004.1| ribosome-associated GTPase EngA [Synechococcus sp. WH 8109] Length = 455 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 13/137 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + + R +P R + D S ++ N P L Sbjct: 177 PIQMAIIGRPNVGKSSLLNAICGEQ---RAIVSPIRGTTRDTI---DTSIIRENRP-WRL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R+ + +G I R ERS + CV L+ID GV + DQ + ++ Sbjct: 230 VDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLS 163 + + +V+ K D + Sbjct: 286 EDGRACVVVVNKWDAVE 302 >gi|289579295|ref|YP_003477922.1| small GTP-binding protein [Thermoanaerobacter italicus Ab9] gi|289529008|gb|ADD03360.1| small GTP-binding protein [Thermoanaerobacter italicus Ab9] Length = 408 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 30/186 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 IA GR N GKSSLIN L N++ +A S+ G T S LP + ++ Sbjct: 12 IAIFGRRNAGKSSLINALTNQE-VALVSDVAGTTTD-------PVSKAMEILPIGPVVII 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G + G L V+ E R+ L L+ID G+ + +++V + Sbjct: 64 DTAGL-------DDTGELGELRVKKTYEVLNRTDL--AILVIDGTIGLSEFEENVLKVIR 114 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + V+ K D LS + + +K K+ R E+I S++K+ GIE L+ + Sbjct: 115 DKNIPVVGVINKKD-LSQYSEE---DKRKWEER----LKLELIEVSALKKHGIEALKMML 166 Query: 207 LETINY 212 ++ Y Sbjct: 167 IKKAPY 172 >gi|149908865|ref|ZP_01897525.1| GTP-binding protein EngA [Moritella sp. PE36] gi|149808139|gb|EDM68080.1| GTP-binding protein EngA [Moritella sp. PE36] Length = 493 Score = 38.1 bits (87), Expect = 0.82, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 35/180 (19%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MA 87 P IA GR NVGKS+L N L ++ A ++ PG T +D + NL Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLT--------RDRKYGQANLAGREFI 53 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 +VD G N D G I ++++S L V ++D R G+ DQ + Sbjct: 54 VVDTGGI--------NGDEEG--IDAKMADQSLLAIEEADAVLFMVDARAGLMVADQAIA 103 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L K+ +V K+D L A Y A ++ ++ + +GI +L Sbjct: 104 EHLRKQQKKVFLVANKVDGLDGDVAVAEF---------YALALGDIYQIAASQGRGINIL 154 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G NVGKS+L+N ++ + + + PG T+ + ++P + + +N + L Sbjct: 205 PIKLAMIGCPNVGKSTLVNRILGEERVV-VYDMPGTTRD-SIYIPMERAG-RNYM----L 257 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + IV+ L V +++D R GV D + F Sbjct: 258 IDTAGVRRRKNINEAVEKFS--IVKALQAIDDANVVLMVLDARVGVTSQDLTLLGFAINS 315 Query: 149 AVSYQIVLTKIDKLS 163 S I + K D L Sbjct: 316 GRSIVIAINKWDGLD 330 >gi|260434394|ref|ZP_05788364.1| small GTP-binding protein [Synechococcus sp. WH 8109] gi|260412268|gb|EEX05564.1| small GTP-binding protein [Synechococcus sp. WH 8109] Length = 431 Score = 38.1 bits (87), Expect = 0.83, Method: Compositional matrix adjust. Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 14/130 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR VGKSSLIN L+ R+ L T A G T+H D+ L + LVD Sbjct: 57 IALFGRVGVGKSSLINALI-RQPLLATDVAHGSTRHQQAV---DWPVEIAGLTRVELVDT 112 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG +D+ G L+ R + +L+ + + D + L + Sbjct: 113 PGI-------DEIDAAGRA---RLASRVAMGADLVLLVVDSDLTRADLEALRTLLESGKP 162 Query: 152 YQIVLTKIDK 161 Q+VL + D+ Sbjct: 163 LQLVLNRSDR 172 >gi|127512226|ref|YP_001093423.1| GTP-binding protein EngA [Shewanella loihica PV-4] gi|166225856|sp|A3QCG6|DER_SHELP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|126637521|gb|ABO23164.1| small GTP-binding protein [Shewanella loihica PV-4] Length = 489 Score = 38.1 bits (87), Expect = 0.83, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADYPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 + GY + +D I ++E+S V L D R G+ D+ + Sbjct: 46 HLSGYEFIVVDTGGIDGTEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADEAIAEH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L ++ + +V K+D + +A Sbjct: 106 LRRREKTTFVVANKVDGIDADSA 128 >gi|237709649|ref|ZP_04540130.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|265754281|ref|ZP_06089470.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|229456285|gb|EEO62006.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263234990|gb|EEZ20545.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 396 Score = 38.1 bits (87), Expect = 0.84, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A +A GR N GKSSLIN L ++ A S+ PG T V K ++ P Sbjct: 7 PSANRLHVALFGRRNSGKSSLINALTG-QDTALVSDIPGTTTD---TVSKAM-EIQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I+R L ++ R L+ C + ++ Sbjct: 62 CL-FIDTPGF----------DDEGELGEMRIIRTL--KAIERTDIALLLCEDEAHEEEKK 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L++K + ++L K D ++ + T I P VI S+ +R GI+ Sbjct: 109 WMKQLEEKNIPVILLLNKAD------IRKDIASTLLRIEKDCGQKPLVI--SAKERTGIK 160 Query: 201 VLRKAILETI 210 + +AILE + Sbjct: 161 KIHQAILEKL 170 >gi|311110602|ref|ZP_07711999.1| GTP-binding protein Era [Lactobacillus gasseri MV-22] gi|311065756|gb|EFQ46096.1| GTP-binding protein Era [Lactobacillus gasseri MV-22] Length = 302 Score = 38.1 bits (87), Expect = 0.84, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 18/175 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A S P T++ K ++ + +D Sbjct: 12 VALIGRPNVGKSTLLNFLVGQK-VAIMSPQPQTTRN------KISGIYTDDQEQIVFIDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK +D + + S + V +++ K DQ + L K Sbjct: 65 PGI---HKPKNKLDDF--MDKSSYSALDEVDVVLFMVEPEPAGKG-DQYIAELLKKIKKP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KIDK+ P ++ K L E++P S+ + + L K I Sbjct: 119 VFLVINKIDKVHPDKLLSIIDSYKNL-----GDFAEIVPISASQGNNVSELIKTI 168 >gi|89897801|ref|YP_521288.1| hypothetical protein DSY5055 [Desulfitobacterium hafniense Y51] gi|122480417|sp|Q24M98|MNME_DESHY RecName: Full=tRNA modification GTPase mnmE gi|89337249|dbj|BAE86844.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 459 Score = 38.1 bits (87), Expect = 0.84, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 21/171 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+ + A ++ PG T+ ++ + L + LVD G Sbjct: 226 GQPNVGKSSLLNALMGEER-AIVTDIPGTTRD----EIRESVTIGGIL--LQLVDTAGL- 277 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G I R + L+I +K + + S D+ + ++ Sbjct: 278 --RESEDLVEKLG--IERSWKAMEKAELILLIIQAGQELKAEELKILSQYDQSVI---VL 330 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K+D L+ E+ + ++ NYPT IP S + G + L K I Sbjct: 331 INKMDLLAGK------ERGEEVLENYPTQQGVWIPFSVKENLGFKQLEKEI 375 >gi|255660055|ref|ZP_05405464.1| ribosomal biogenesis GTPase [Mycoplasma genitalium G37] Length = 255 Score = 38.1 bits (87), Expect = 0.84, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 10/67 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKSSLIN+L+N+ +L + +N G T+ LN+ P + L D Sbjct: 104 LAVIGMPNVGKSSLINLLINKNHL-KVANRAGITKSLNWIQIS---------PELLLSDT 153 Query: 92 PGYGYAR 98 PG R Sbjct: 154 PGVFLKR 160 >gi|21230731|ref|NP_636648.1| GTP-binding protein Era [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769273|ref|YP_244035.1| GTP-binding protein Era [Xanthomonas campestris pv. campestris str. 8004] gi|188992424|ref|YP_001904434.1| GTP-binding protein Era [Xanthomonas campestris pv. campestris str. B100] gi|25008429|sp|Q8PB51|ERA_XANCP RecName: Full=GTPase Era gi|81304768|sp|Q4USF8|ERA_XANC8 RecName: Full=GTPase Era gi|226741404|sp|B0RX26|ERA_XANCB RecName: Full=GTPase Era gi|21112324|gb|AAM40572.1| GTP binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574605|gb|AAY50015.1| GTP binding protein [Xanthomonas campestris pv. campestris str. 8004] gi|167734184|emb|CAP52392.1| GTP-binding protein [Xanthomonas campestris pv. campestris] Length = 298 Score = 38.1 bits (87), Expect = 0.84, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 +A GR NVGKS+L N LV K ++ SN P T+H + P + LV Sbjct: 12 VAVIGRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIA--------TFPEGQLMLV 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF--LDK 147 D PG R K+ ++ V + R +L V + + ++D +F L Sbjct: 63 DTPGL--HREQKRAMNR-----VMNRAARGSLEGVDAAVLVIEAGRWDEEDTLAFRVLSD 115 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V +V+ K+D+L TA R + HP S++KRKG+E L +L Sbjct: 116 ADVPVVLVVNKVDRLKDKTALFPFLAQVSEGRTFAAVHP----VSALKRKGLEALVSDLL 171 Query: 208 ETI 210 + + Sbjct: 172 KLV 174 >gi|153815591|ref|ZP_01968259.1| hypothetical protein RUMTOR_01827 [Ruminococcus torques ATCC 27756] gi|145847022|gb|EDK23940.1| hypothetical protein RUMTOR_01827 [Ruminococcus torques ATCC 27756] Length = 298 Score = 38.1 bits (87), Expect = 0.85, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 21/183 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ + + L + VD Sbjct: 10 VTLIGRPNVGKSTLMNHLIGQK-IAITSNKPQTTRN------RIQTVLTTEEGQIVFVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + G +V ++ERS + V L++ + D+ + L K Sbjct: 63 PGIHKAK------NKLGEYMVN-IAERSLNEVDVVLWLVEPSAFIGAGDRHIIEQLKKVK 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KID + +E L + Y A E++P S+ + L K IL+ Sbjct: 116 TPVILVINKIDMVK---KEEILTFIDAYRKEYDFA--EIVPVSARSGDNTDELIKVILKY 170 Query: 210 INY 212 + Y Sbjct: 171 LPY 173 >gi|152967059|ref|YP_001362843.1| GTP-binding protein EngA [Kineococcus radiotolerans SRS30216] gi|151361576|gb|ABS04579.1| small GTP-binding protein [Kineococcus radiotolerans SRS30216] Length = 496 Score = 38.1 bits (87), Expect = 0.85, Method: Compositional matrix adjust. Identities = 16/34 (47%), Positives = 23/34 (67%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNL 55 GL+P+ GP +A GR NVGKSS++N L + + Sbjct: 228 GLIPEGGPRRVALLGRPNVGKSSMLNKLAGSERV 261 >gi|239907769|ref|YP_002954510.1| GTP-binding protein EngA [Desulfovibrio magneticus RS-1] gi|259645872|sp|C4XIQ6|DER_DESMR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|239797635|dbj|BAH76624.1| GTP-binding protein EngA [Desulfovibrio magneticus RS-1] Length = 444 Score = 38.1 bits (87), Expect = 0.86, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKSSLIN LV L S+ G T+ V + VD Sbjct: 182 LAVLGRPNAGKSSLINALVGESRLI-VSDIAGTTRDAVDVV------VHQKGKRYLFVDT 234 Query: 92 PGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 G +K GL + + LS ++ID GV D+ + SFLD Sbjct: 235 AGV------RKRTRITDGLERYSVAKALSSAKRADVAVVVIDATGGVGVQDKRLISFLDS 288 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKGI 199 + ++ + + K D L P ++ L K + R +H V+ S+ K KG+ Sbjct: 289 ERKAFLVAVNKTD-LVPQ--KDMLALQKDIARELRMCSHVPVLYMSAAKGKGV 338 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 74/187 (39%), Gaps = 30/187 (16%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP +A GR NVGKS+L N L R A T + PG T+ P + + L Sbjct: 2 PPIVAIVGRPNVGKSTLFNRL-TRGRRAITHDLPGVTRD-RLEAPAEIEGR-----FVTL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFS 143 VD G Y + R + E++ T V L+D + G ++ D+ Sbjct: 55 VDTGGMDYEAEES---------LARQIVEQAEAALVTADVVLFLVDGKAGRTALEDDLAE 105 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + + + K+D LE+ + ++ ++ S+ +G+ L Sbjct: 106 RLRRLGKPVIVAVNKVD---------GLERVAAMTADFHAWGLPLLAISAAHGQGMAELA 156 Query: 204 KAILETI 210 +AI E + Sbjct: 157 EAIAERL 163 >gi|198426295|ref|XP_002128534.1| PREDICTED: similar to guanine nucleotide binding protein-like 1 [Ciona intestinalis] Length = 613 Score = 38.1 bits (87), Expect = 0.86, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I F G NVGKSSL+N L+ RK + TS PG T++ +F+ K + L D Sbjct: 347 IGFVGHPNVGKSSLMNGLIGRK-VVSTSVTPGHTKYFQTYFLTK----------TVKLCD 395 Query: 91 MPG 93 PG Sbjct: 396 SPG 398 >gi|329114596|ref|ZP_08243355.1| GTP-binding protein EngA [Acetobacter pomorum DM001] gi|326696076|gb|EGE47758.1| GTP-binding protein EngA [Acetobacter pomorum DM001] Length = 479 Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 16/150 (10%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP P + +GR NVGKS+L N LV R+ A ++ PG T+ V + ++ Sbjct: 14 LPTGDMPVVVIAGRPNVGKSTLFNRLVGRRQ-ALVADTPGVTRDRKEGV----ALIRGRY 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDV 141 + L+D G A AP DS G + R+ SE + V +D R G+ D+ Sbjct: 69 --VRLIDTAGLEEA-AP----DSLFGRM-RFSSESAVREADLVLFCVDARAGITPADEHF 120 Query: 142 FSFLDKKAVSYQIVLTKID-KLSPTTAQET 170 ++ ++ +V K + +L +A E Sbjct: 121 AQWIRRQNRPVLLVANKTEGRLGTASAMEA 150 >gi|326389849|ref|ZP_08211413.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus JW 200] gi|325994117|gb|EGD52545.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus JW 200] Length = 302 Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 23/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N ++ K +A TS P T++ + L + + VD Sbjct: 8 VALVGRTNVGKSTLLNAILQEK-IAITSPKPQTTRNTIHGI------LTTDEYQVIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIV-RYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + + + R L E + + +I+ V D+ + L + Sbjct: 61 PG---IHKPKSKLSEFMIEVAKRTLKE---VDLILYMIEPDTEVGPGDRYIIEHLKEVDT 114 Query: 151 SYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID + +ET++ K +Y ++ V+ S+++ K I++L++ I+ Sbjct: 115 PVILVVNKIDLVPEERVEETIKIFKEQYEFKD-------VVAISAIENKNIDLLKEKIV 166 >gi|298387730|ref|ZP_06997281.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 1_1_14] gi|298259586|gb|EFI02459.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 1_1_14] Length = 185 Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 33/61 (54%) Query: 102 KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 K D +I Y+ ER + +++LID R ++ID + +L + + + I+ TK DK Sbjct: 70 KGKDQIRTIIEDYILEREQMTNLFVLIDSRLEPQKIDLEFMEWLGENGIPFSIIFTKADK 129 Query: 162 L 162 L Sbjct: 130 L 130 >gi|256848511|ref|ZP_05553953.1| tRNA modification GTPase TrmE [Lactobacillus coleohominis 101-4-CHN] gi|256714778|gb|EEU29757.1| tRNA modification GTPase TrmE [Lactobacillus coleohominis 101-4-CHN] Length = 462 Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L++ ++ A +N G T+ V +++ N+ N++P + L+D Sbjct: 227 AIIGRPNVGKSSLLNSLLH-EDKAIVTNVAGTTRD----VIEEYVNV-NDVP-LKLIDTA 279 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R V+ G + R T + LLID + + DQ + + K Sbjct: 280 GI---RHTDDTVEKIG--VERSRQAIDTADLILLLIDSSQPLTKEDQQLIAQTANK--PR 332 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I+ K D PT + +K + L+ +VI S K +GI+ L AI Sbjct: 333 IIIFNKSD--LPTKVDQ--DKLQALVDG-----DKVITASMTKHEGIDELSAAI 377 >gi|291288774|ref|YP_003505590.1| ribosome-associated GTPase EngA [Denitrovibrio acetiphilus DSM 12809] gi|290885934|gb|ADD69634.1| ribosome-associated GTPase EngA [Denitrovibrio acetiphilus DSM 12809] Length = 450 Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 71/180 (39%), Gaps = 23/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 + GR NVGKS+L N L K LA + PG T+ + F + + +VD Sbjct: 4 VGIIGRPNVGKSTLFNRLAG-KRLAIVDDMPGVTRDRIEFTTEWEGEKFR-------IVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G+ K + ++ S L+ D GV +D+ V L K Sbjct: 56 TAGFDLKEELVKK-----EMQQQFYSALDEADYFILMADGTEGVHPLDEIVIDLLRHKNK 110 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +Q+V+ K+D S K ++ Y +I S+ + +++L I++ I Sbjct: 111 PFQLVVNKVDSDS---------KEDFIYDFYRMGVEHIIAISASHGRNVDMLLDEIIKFI 161 >gi|219684291|ref|ZP_03539235.1| ribosome-associated GTPase EngA [Borrelia garinii PBr] gi|219672280|gb|EED29333.1| ribosome-associated GTPase EngA [Borrelia garinii PBr] Length = 433 Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF--SNLKNNLPAMAL 88 ++ G+ N GKS+LIN L + ++ S+ PG T +DF + L N + Sbjct: 175 KVGIIGKPNSGKSTLINYLSGNE-ISIVSDQPGTT--------RDFIKTKLTRNGKVFEI 225 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + + R L + V+LLID + + D+ + ++ KK Sbjct: 226 IDTAGIRRRARVNEVVEYYS--VNRALKVIDMVDIVFLLIDVKEELTSQDKKIAHYVTKK 283 Query: 149 AVSYQIVLTKIDKLSPTTAQ-ETLE-KTKYLIRNYPTAHPEVIPTSSVKRK-GIEVLRKA 205 IV +K D L + ETL+ + K+ +P + I SV +K G++ L K Sbjct: 284 GKGIIIVFSKWDLLEESKGYFETLKGRVKFF---FPVLNFAPIFRISVHKKIGLDSLFKE 340 Query: 206 ILE 208 L+ Sbjct: 341 ALK 343 >gi|318061403|ref|ZP_07980124.1| GTP-binding protein Der [Streptomyces sp. SA3_actG] gi|318078001|ref|ZP_07985333.1| GTP-binding protein Der [Streptomyces sp. SA3_actF] Length = 488 Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 22/184 (11%) Query: 28 GP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 GP P +A GR NVGKS+L+N ++ R+ A + PG T+ + +++ + Sbjct: 47 GPLPRLAVVGRPNVGKSTLVNRIIGRRE-AVVEDRPGVTRDRVTY-EAEWAGRR-----F 99 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G+ +D+ Y E S V ++D G D+ V L Sbjct: 100 KLVDTGGW---EQDVLGIDASVAAQAEYAIEASD--AVVFVVDATVGATDTDEAVVRLLR 154 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + K+D S TL + E P S++ +G + A+ Sbjct: 155 KAGKPVVLCANKVDGPSGEADAATL---------WSLGLGEPHPVSALHGRGTGDMLDAV 205 Query: 207 LETI 210 LE + Sbjct: 206 LEAL 209 >gi|300741227|ref|ZP_07071248.1| ribosome-associated GTPase EngA [Rothia dentocariosa M567] gi|300380412|gb|EFJ76974.1| ribosome-associated GTPase EngA [Rothia dentocariosa M567] Length = 529 Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 73/186 (39%), Gaps = 31/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG----RTQHLNFFVPKDFSNLKNNLPA 85 P +A GR NVGKS++IN ++ R+ A + PG R + +V K F+ Sbjct: 76 PVVAIVGRPNVGKSTIINRILGRRE-AVVEDKPGVTRDRVSYKAEWVGKRFT-------- 126 Query: 86 MALVDMPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G+ AR V + V V L++D R G+ D+ + Sbjct: 127 --LVDTGGWESDARGIDAQVADQAEIAVEQAD------VVILVVDARVGITASDEQIVRM 178 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + ++ KID LE Y + + P P S + +G+ Sbjct: 179 LRRVKKPIILMANKID-------DSHLEPEIYSLWSLGMGQP--FPVSGLHGRGLADALD 229 Query: 205 AILETI 210 +LE + Sbjct: 230 ELLEVM 235 >gi|206603829|gb|EDZ40309.1| GTP-binding protein (EngA) [Leptospirillum sp. Group II '5-way CG'] Length = 469 Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust. Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 A PP +A GR NVGKS+L+N L+ + L TS PG T+ Sbjct: 197 ADPPRVAVIGRPNVGKSTLVNRLLGEERLV-TSPIPGTTR 235 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 15/134 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP IA GR NVGKS+L N L++R+ A + PG T+ + +S + L Sbjct: 4 PPLIAILGRPNVGKSTLFNRLLSRRE-AIVEDRPGVTRD------RHYSQGTIGRKSFRL 56 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G + D G +R L V ++D R G +D DV + Sbjct: 57 VDTGGILFGD------DHPLGESIRKQALFALEEADAVIYVMDGREGYLPVDADVIGRIR 110 Query: 147 KKAVSYQIVLTKID 160 + + K+D Sbjct: 111 RSGKPSVFAVNKVD 124 >gi|292493916|ref|YP_003529355.1| tRNA modification GTPase TrmE [Nitrosococcus halophilus Nc4] gi|291582511|gb|ADE16968.1| tRNA modification GTPase TrmE [Nitrosococcus halophilus Nc4] Length = 458 Score = 38.1 bits (87), Expect = 0.88, Method: Compositional matrix adjust. Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 26/154 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT-----QHLNF-FVPKDFSNLKNNLPA 85 + GR NVGKSSL N L + A ++ PG T +H+ +P S+ + Sbjct: 227 VVLVGRPNVGKSSLHNRLAGFEA-AIVTDVPGTTRDLLREHITIDGLPIRLSDTAGLHDS 285 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M +++ G R N D V L+ D + G+ +++Q + L Sbjct: 286 MDIIEQEGMRRTREEFTNADH-----------------VLLIADDQVGLTELEQSILGEL 328 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 VS+ ++L KID LS +A+ + + ++R Sbjct: 329 PDN-VSHTLILNKID-LSGASAERREDSQRVVLR 360 >gi|297545446|ref|YP_003677748.1| small GTP-binding protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843221|gb|ADH61737.1| small GTP-binding protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 408 Score = 38.1 bits (87), Expect = 0.88, Method: Compositional matrix adjust. Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 30/186 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 IA GR N GKSSLIN L N++ +A S+ G T S LP + ++ Sbjct: 12 IAIFGRRNAGKSSLINALTNQE-VALVSDVAGTTTD-------PVSKAMEILPIGPVVII 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G + G L V+ E R+ L L+ID G+ + +++V + Sbjct: 64 DTAGL-------DDTGELGELRVKKTYEVLNRTDL--AILVIDGTIGLSEFEENVLKVIR 114 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + V+ K D LS + + +K K+ R E+I S++K+ GIE L+ + Sbjct: 115 DKNIPVVGVINKKD-LSQYSEE---DKRKWEER----LKLELIEVSALKKHGIEALKMML 166 Query: 207 LETINY 212 ++ Y Sbjct: 167 IKKAPY 172 >gi|325963748|ref|YP_004241654.1| hypothetical protein Asphe3_23860 [Arthrobacter phenanthrenivorans Sphe3] gi|323469835|gb|ADX73520.1| GTPase of unknown function [Arthrobacter phenanthrenivorans Sphe3] Length = 540 Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust. Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 21/191 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G + GKSSL N + + + P ++ L ++ + P + +D+ Sbjct: 59 VGFFGATGSGKSSLFNAVSGAEIATAAARRPTTSEPL-----AGVWGVEGSEPLLDWLDV 113 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRC----------------VYLLIDCRHGVK 135 +A A + D GLI+ L + + + V++L ++ Sbjct: 114 RNRHHADAVEGFADEGTGLILLDLPDFDSTKAANREVVERMVGLVDVLVWVLDPQKYADA 173 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D S L +VL ++D+L Q LE + ++ A +V+ S++ Sbjct: 174 AVHNDFLSRLASHGAVTLVVLNQVDRLPERDVQPVLESLRSILARDGLAKVQVLAASALT 233 Query: 196 RKGIEVLRKAI 206 GI+ +R AI Sbjct: 234 GAGIDQVRAAI 244 >gi|317180598|dbj|BAJ58384.1| GTP-binding protein EngA [Helicobacter pylori F32] Length = 459 Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + V L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--VLLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 365 >gi|308069435|ref|YP_003871040.1| hypothetical protein PPE_02674 [Paenibacillus polymyxa E681] gi|305858714|gb|ADM70502.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 417 Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 30/191 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P I GR N GKSS++N L + +A S G T F P + LP Sbjct: 7 PRSNRPHIVLLGRRNAGKSSILNTLTGQP-VAVVSPVGGTTTD-PVFKPMEL------LP 58 Query: 85 A--MALVDMPGY---GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 A + LVD G G ++N + L ++ L+ID GV + Sbjct: 59 AGPIVLVDTAGLDDEGEIGELRRN---------KTLEILNSTDLALLVIDATVGVGPFEH 109 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 ++ L K + VL K+D L+ + T T+ + +IP S+ +G Sbjct: 110 ELLEKLRTKKIPVIGVLNKVDTLTESDKTATKLATELDL--------TLIPFSASLLRGD 161 Query: 200 EVLRKAILETI 210 L+KAI T+ Sbjct: 162 TELKKAITNTL 172 >gi|257222981|gb|ACV52761.1| GTP-binding protein [Oryza sativa Indica Group] gi|257222985|gb|ACV52763.1| GTP-binding protein [Oryza sativa Indica Group] gi|257222991|gb|ACV52766.1| GTP-binding protein [Oryza sativa Indica Group] gi|257222999|gb|ACV52770.1| GTP-binding protein [Oryza sativa Indica Group] gi|257223011|gb|ACV52776.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223023|gb|ACV52782.1| GTP-binding protein [Oryza sativa Japonica Group] Length = 301 Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K T + PG+T+H + + + L D Sbjct: 95 VGFVGYPNVGKSSTINALVGEKKTGVT-HTPGKTKHFQTLIISE---------ELTLCDC 144 Query: 92 PG 93 PG Sbjct: 145 PG 146 >gi|257222977|gb|ACV52759.1| GTP-binding protein [Oryza sativa Indica Group] gi|257222979|gb|ACV52760.1| GTP-binding protein [Oryza sativa Indica Group] gi|257222983|gb|ACV52762.1| GTP-binding protein [Oryza sativa Indica Group] gi|257222987|gb|ACV52764.1| GTP-binding protein [Oryza sativa Indica Group] gi|257222989|gb|ACV52765.1| GTP-binding protein [Oryza sativa Indica Group] gi|257222993|gb|ACV52767.1| GTP-binding protein [Oryza sativa Indica Group] gi|257222995|gb|ACV52768.1| GTP-binding protein [Oryza sativa Indica Group] gi|257222997|gb|ACV52769.1| GTP-binding protein [Oryza sativa Indica Group] gi|257223001|gb|ACV52771.1| GTP-binding protein [Oryza sativa Indica Group] gi|257223003|gb|ACV52772.1| GTP-binding protein [Oryza sativa Indica Group] gi|257223005|gb|ACV52773.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223007|gb|ACV52774.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223009|gb|ACV52775.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223013|gb|ACV52777.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223015|gb|ACV52778.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223017|gb|ACV52779.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223019|gb|ACV52780.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223021|gb|ACV52781.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223025|gb|ACV52783.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223027|gb|ACV52784.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223029|gb|ACV52785.1| GTP-binding protein [Oryza sativa Japonica Group] gi|257223031|gb|ACV52786.1| GTP-binding protein [Oryza sativa Japonica Group] Length = 301 Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K T + PG+T+H + + + L D Sbjct: 95 VGFVGYPNVGKSSTINALVGEKKTGVT-HTPGKTKHFQTLIISE---------ELTLCDC 144 Query: 92 PG 93 PG Sbjct: 145 PG 146 >gi|12045301|ref|NP_073112.1| ribosomal biogenesis GTPase [Mycoplasma genitalium G37] gi|2496446|sp|Q49435|RBGA_MYCGE RecName: Full=Probable ribosome biogenesis GTPase A gi|3845035|gb|AAC72462.1| GTP-binding conserved hypothetical protein [Mycoplasma genitalium G37] gi|166078821|gb|ABY79439.1| GTP-binding conserved hypothetical protein [synthetic Mycoplasma genitalium JCVI-1.0] Length = 270 Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 10/67 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKSSLIN+L+N+ +L + +N G T+ LN+ P + L D Sbjct: 119 LAVIGMPNVGKSSLINLLINKNHL-KVANRAGITKSLNWIQIS---------PELLLSDT 168 Query: 92 PGYGYAR 98 PG R Sbjct: 169 PGVFLKR 175 >gi|304398581|ref|ZP_07380453.1| ribosome-associated GTPase EngA [Pantoea sp. aB] gi|304353792|gb|EFM18167.1| ribosome-associated GTPase EngA [Pantoea sp. aB] Length = 496 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ DQ + Sbjct: 46 EVEGREFIVIDTGGIDGTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + + +V K D + P A Sbjct: 106 LRSRQKATFLVANKTDGMDPDQA 128 >gi|295398145|ref|ZP_06808194.1| tRNA modification GTPase TrmE [Aerococcus viridans ATCC 11563] gi|294973664|gb|EFG49442.1| tRNA modification GTPase TrmE [Aerococcus viridans ATCC 11563] Length = 463 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 32/193 (16%) Query: 22 GLLPKAGPPEI-------AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 GLL A +I A GR NVGKSSL+N L+ R+ A ++ G T+ + Sbjct: 211 GLLSTAKQGKILRDGISTAIVGRPNVGKSSLLNALL-REEKAIVTDIEGTTRD----TVE 265 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 ++ N++ +P + LVD G R + V+ G + R V LL++ + Sbjct: 266 EYINIR-GVP-LKLVDTAGI---RDTEDVVERIG--VERSKKALMEAELVLLLLNQSEAL 318 Query: 135 KQIDQDVFSFL-DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D+++ S D K + I++ KID S + LE + E+I TS Sbjct: 319 TAGDRELLSLTQDHKRI---IIMNKIDLPSQLLKESLLEWVE---------EDEIIATSM 366 Query: 194 VKRKGIEVLRKAI 206 + ++GI+ L + I Sbjct: 367 MTQEGIDALEEKI 379 >gi|269926863|ref|YP_003323486.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798] gi|269790523|gb|ACZ42664.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798] Length = 448 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS L+N ++ ++ A S+ PG T+ P D + ++ + L+D Sbjct: 188 IAIVGRPNVGKSRLLNAILGQER-AIVSDVPGTTRD-----PVD-TEIQWGDQRIVLIDT 240 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + + R L V LLID + G+ D+ + ++ ++ Sbjct: 241 AGIRRRGKVESGIEQYS--VFRTLRAIGRSDVVLLLIDAQEGLTAQDEHIAGYVLEEYKG 298 Query: 152 YQIVLTKID 160 +V+ K D Sbjct: 299 LVLVVNKWD 307 >gi|281412323|ref|YP_003346402.1| tRNA modification GTPase TrmE [Thermotoga naphthophila RKU-10] gi|281373426|gb|ADA66988.1| tRNA modification GTPase TrmE [Thermotoga naphthophila RKU-10] Length = 450 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 23/172 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKS+L+N L+N ++ A ++ PG T+ V + +K L +VD G Sbjct: 218 GKPNVGKSTLLNRLLN-EDRAIVTDIPGTTRD----VISEEIVIKGIL--FRIVDTAG-- 268 Query: 96 YARAPKKN-VDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 R+ + V+ G I R L E V ++D + + D+ + + K Y + Sbjct: 269 -VRSETNDLVERLG--IERTLQEVEKADIVLFVLDASSPLDEEDRKILERIKNK--RYLV 323 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ K+D + +E I+N ++ S++K +G+E L +AI Sbjct: 324 VINKVDVVEKINEEE--------IKNKLGTDRHMVKISALKGEGLEKLEEAI 367 >gi|256079686|ref|XP_002576116.1| GTP-binding protein-related [Schistosoma mansoni] gi|238661377|emb|CAZ32351.1| GTP-binding protein-related [Schistosoma mansoni] Length = 725 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 7/72 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMA 87 P + F G NVGKSS +N ++ K + S PG+T+H +V D + + P + Sbjct: 375 PLTVGFIGYPNVGKSSTLNAILGHKKVP-VSVTPGKTKHFQTIYVRSDL--ILCDCPGLV 431 Query: 88 LVDMPGYGYARA 99 MP + Y+RA Sbjct: 432 ---MPSFAYSRA 440 >gi|206891018|ref|YP_002249510.1| GTP-binding protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742956|gb|ACI22013.1| GTP-binding protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 423 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 14/138 (10%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +PK+ IA GR+N GKSSLIN L + +LA S+ PG T V K L L Sbjct: 3 VPKSQRLHIALFGRTNAGKSSLINALTGQ-SLAIVSDVPGTTTD---PVAKAMEILP--L 56 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVF 142 + L+D G +V G L + E V L+ID G + ++D+ Sbjct: 57 GPVVLIDTAGI-------DDVGKLGELRKKKSYEVLDKTDLVLLVIDPEKGFGEFERDIV 109 Query: 143 SFLDKKAVSYQIVLTKID 160 ++ V+ KID Sbjct: 110 KKAEETGTPLIYVVNKID 127 >gi|170767043|ref|ZP_02901496.1| selenocysteine-specific translation elongation factor [Escherichia albertii TW07627] gi|170124481|gb|EDS93412.1| selenocysteine-specific translation elongation factor [Escherichia albertii TW07627] Length = 614 Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ QE + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDDARVQEVEHQVKAVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFVTAATEGRGIDALREHLLQ 163 >gi|329769201|ref|ZP_08260621.1| selenocysteine-specific translation elongation factor [Gemella sanguinis M325] gi|328839420|gb|EGF88998.1| selenocysteine-specific translation elongation factor [Gemella sanguinis M325] Length = 628 Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 34/187 (18%) Query: 32 IAFSGRSNVGKSSLINILVN-RKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA---MA 87 I +G + GK++LI L + + G + +L F +LP+ Sbjct: 7 IGTAGHIDHGKTTLIKALSGIETDTTQEEKERGMSINLGFAYF--------DLPSGKRCG 58 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK-QIDQ--DVFSF 144 +VD+PG+ I L+ S + V LL+D R G+ Q + D+ + Sbjct: 59 VVDVPGHEK-------------FIKNMLAGVSGINLVLLLVDSREGIMPQTKEHIDILTL 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +Y IV+TKID + + E + + + +I S+ RKGI+VL Sbjct: 106 LGIE--NYIIVMTKIDLVEEEYRELVKEDIREFTKGSALENAPIIEVDSISRKGIDVL-- 161 Query: 205 AILETIN 211 L+TI+ Sbjct: 162 --LDTID 166 >gi|258513539|ref|YP_003189761.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771] gi|257777244|gb|ACV61138.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771] Length = 408 Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust. Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 31/188 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR N GKSSLIN L R+NLA SN G T + K L + Sbjct: 5 PRGTRLHIALFGRRNAGKSSLINAL-TRQNLAIVSNVAGTTTDPVY---KSMEILP--IG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + L+D G +D G L + + ++ + V L+ D + G+ + + + Sbjct: 59 PVVLIDTAG----------LDDEGELGQKRVAKSMAVLAKTDLVLLVADVQKGLGKTELE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + KK + V KID L +E ++P + S++ KGI Sbjct: 109 LIETARKKELPVIGVANKIDLLP--QPEEI---------SFPLPDMTWVKVSALTGKGIN 157 Query: 201 VLRKAILE 208 L++A+++ Sbjct: 158 ELKQAMVK 165 >gi|15642456|ref|NP_232089.1| GTP-binding protein Era [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590984|ref|ZP_01678303.1| GTP-binding protein Era [Vibrio cholerae 2740-80] gi|153820071|ref|ZP_01972738.1| GTP-binding protein Era [Vibrio cholerae NCTC 8457] gi|227082581|ref|YP_002811132.1| GTP-binding protein Era [Vibrio cholerae M66-2] gi|229507480|ref|ZP_04396985.1| GTP-binding protein Era [Vibrio cholerae BX 330286] gi|229512325|ref|ZP_04401804.1| GTP-binding protein Era [Vibrio cholerae B33] gi|229519461|ref|ZP_04408904.1| GTP-binding protein Era [Vibrio cholerae RC9] gi|229606985|ref|YP_002877633.1| GTP-binding protein Era [Vibrio cholerae MJ-1236] gi|254849585|ref|ZP_05238935.1| GTP-binding protein Era [Vibrio cholerae MO10] gi|255746869|ref|ZP_05420814.1| GTP-binding protein Era [Vibrio cholera CIRS 101] gi|262162034|ref|ZP_06031050.1| GTP-binding protein Era [Vibrio cholerae INDRE 91/1] gi|262404773|ref|ZP_06081328.1| GTP-binding protein Era [Vibrio sp. RC586] gi|298500183|ref|ZP_07009988.1| GTP-binding protein Era [Vibrio cholerae MAK 757] gi|31340514|sp|Q9KPB3|ERA_VIBCH RecName: Full=GTPase Era gi|9657038|gb|AAF95602.1| GTP-binding protein Era [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547161|gb|EAX57290.1| GTP-binding protein Era [Vibrio cholerae 2740-80] gi|126509383|gb|EAZ71977.1| GTP-binding protein Era [Vibrio cholerae NCTC 8457] gi|227010469|gb|ACP06681.1| GTP-binding protein Era [Vibrio cholerae M66-2] gi|229344150|gb|EEO09125.1| GTP-binding protein Era [Vibrio cholerae RC9] gi|229352290|gb|EEO17231.1| GTP-binding protein Era [Vibrio cholerae B33] gi|229354985|gb|EEO19906.1| GTP-binding protein Era [Vibrio cholerae BX 330286] gi|229369640|gb|ACQ60063.1| GTP-binding protein Era [Vibrio cholerae MJ-1236] gi|254845290|gb|EET23704.1| GTP-binding protein Era [Vibrio cholerae MO10] gi|255735271|gb|EET90671.1| GTP-binding protein Era [Vibrio cholera CIRS 101] gi|262028283|gb|EEY46940.1| GTP-binding protein Era [Vibrio cholerae INDRE 91/1] gi|262349805|gb|EEY98943.1| GTP-binding protein Era [Vibrio sp. RC586] gi|297540876|gb|EFH76930.1| GTP-binding protein Era [Vibrio cholerae MAK 757] Length = 325 Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V D N A+ VD Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETD-----GNYQAI-YVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 87 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFTKLQKANF 140 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D++ LE +K + +++P S+ + K +VL+K + Sbjct: 141 PVVLCVNKVDQVKDRNEVMLHMLELSKRM------QFVDIVPISAKQGKNTDVLKKHV 192 >gi|297822381|ref|XP_002879073.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata] gi|297324912|gb|EFH55332.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata] Length = 539 Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV +K TS PG+T+H + + + L D Sbjct: 307 VGFVGYPNVGKSSTINALVGQKRTGVTST-PGKTKHFQTLIISE---------DLMLCDC 356 Query: 92 PG 93 PG Sbjct: 357 PG 358 >gi|260910017|ref|ZP_05916700.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 472 str. F0295] gi|260635847|gb|EEX53854.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 472 str. F0295] Length = 437 Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 11/134 (8%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNR-KNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 G P A GR NVGKSS+IN + +N+ R F F Sbjct: 174 GIPRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFDKFGFD--------F 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G ++++ + ++R + L+ID G++ D ++F + Sbjct: 226 YLVDTAGIRRKNKVTEDLEFYS--VMRSIRSIEHSDVCILMIDATRGIEAQDMNIFQLIQ 283 Query: 147 KKAVSYQIVLTKID 160 K S +V+ K D Sbjct: 284 KNQKSLVVVVNKWD 297 >gi|194246696|ref|YP_002004335.1| GTP-binding protein Era [Candidatus Phytoplasma mali] gi|193807053|emb|CAP18489.1| Glycyl-tRNA synthetase [Candidatus Phytoplasma mali] Length = 293 Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 30/182 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+LIN+LV +K ++ S+ P T + V D + + +D Sbjct: 8 ITILGRPNVGKSTLINVLVKQK-ISIVSDKPNVTINKIIGVCNDIDS------QLVFIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY----LLIDCRHGVKQIDQDVFSFLDK 147 PG+ + L+ + + E S+L+ +Y +L + ++ + S + K Sbjct: 61 PGFNNRKF----------LLSKRMDE-SSLKSIYGVDVILFLITDILNSSEKKILSNIQK 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQE--TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 IV+ KID + + L+ KY ++IP S++ + + L+ + Sbjct: 110 HKKPIIIVINKIDNFKNKSQIDKIILDCLKYF------KFDDIIPISAINSQNLLPLKNS 163 Query: 206 IL 207 IL Sbjct: 164 IL 165 >gi|326520077|dbj|BAK03963.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326533338|dbj|BAJ93641.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 608 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K TS PG+T+H + + + L D Sbjct: 325 VGFVGYPNVGKSSTINALVGEKKTGVTST-PGKTKHFQTLIISE---------ELMLCDC 374 Query: 92 PG 93 PG Sbjct: 375 PG 376 >gi|217077884|ref|YP_002335602.1| GTP-binding protein EngA [Thermosipho africanus TCF52B] gi|226741195|sp|B7IE34|DER_THEAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|217037739|gb|ACJ76261.1| GTP-binding protein EngA [Thermosipho africanus TCF52B] Length = 439 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 12/179 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 ++F GR N GKS+L N ++N++ + T PG T+ ++ V N VD Sbjct: 184 VSFIGRPNAGKSTLFNSILNKERVLVTP-IPGTTRDSVDELVTI-------NGRKYLFVD 235 Query: 91 MPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G ++ K++D + VR + V +LID G+ DQ + + + Sbjct: 236 TAGLRRKSKVDYKSLDMYSN--VRSIKSIENSDVVVILIDAIEGITHQDQRIAGIAENRG 293 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + KID + ++ ++ + Y + +I S++ +KGI+ L AI E Sbjct: 294 KATIVAFNKIDLIKNFKYKKEEFIDQFNEKLYFINYSPLIFLSAINKKGIDNLINAIDE 352 >gi|159471285|ref|XP_001693787.1| predicted protein [Chlamydomonas reinhardtii] gi|158283290|gb|EDP09041.1| predicted protein [Chlamydomonas reinhardtii] Length = 84 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 26/94 (27%) Query: 39 NVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYAR 98 NVGKSS +N L+ K +A +S+ PGRT+H V P++ L D PG + R Sbjct: 2 NVGKSSTMNALLGAKRVAVSSH-PGRTKHYQTHV---------MCPSLMLCDCPGLVFPR 51 Query: 99 AP--------------KKNVDSWGGLIVRYLSER 118 + D + +VRYL+ER Sbjct: 52 LDVSLPMQVLFGSYPIARCRDPYA--VVRYLAER 83 >gi|134045747|ref|YP_001097233.1| small GTP-binding protein [Methanococcus maripaludis C5] gi|132663372|gb|ABO35018.1| small GTP-binding protein [Methanococcus maripaludis C5] Length = 346 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 36/190 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + +G NVGKS+L+ L + + ++ P T+ LN ++ + ++ Sbjct: 174 PSVVIAGYPNVGKSTLLRTLTDAE--PEVNSYPFTTKGLNIGYTEE---------GIQII 222 Query: 90 DMPGYG----YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 D PG Y R +++ + + YLS+ + +ID ++ F+ L Sbjct: 223 DTPGVLDRPIYER---NDIELHAVVAINYLSD-----MILFVIDPTEFCGFTIEEQFNLL 274 Query: 146 DKKAVSYQ----IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + LTKID E L+ + + Y EV+ SS+K++GI Sbjct: 275 QEVRKTFNAPILVALTKID----VDEMEGLDALEENLGEY-----EVMKVSSLKKEGIVD 325 Query: 202 LRKAILETIN 211 LRK IL+ +N Sbjct: 326 LRKRILDILN 335 >gi|260551499|ref|ZP_05825683.1| GTP-binding protein 16S rRNA-binding, ribosome-associated GTPase [Acinetobacter sp. RUH2624] gi|260405493|gb|EEW98986.1| GTP-binding protein 16S rRNA-binding, ribosome-associated GTPase [Acinetobacter sp. RUH2624] Length = 342 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 20/183 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK--QIDQDVFSFLDKKA 149 PG KK V + ++ R + S LR V L++ K Q D V L Sbjct: 95 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDAYKWTQNDDLVLEKLKNAE 147 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 148 MPVILVINKADTFEDKREILPLIQERTKLMNF----AEIVPVSALRGANLEHLSETIEKY 203 Query: 210 INY 212 + Y Sbjct: 204 LPY 206 >gi|227537540|ref|ZP_03967589.1| GTP-binding protein EngA [Sphingobacterium spiritivorum ATCC 33300] gi|227242677|gb|EEI92692.1| GTP-binding protein EngA [Sphingobacterium spiritivorum ATCC 33300] Length = 441 Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 9/131 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+ GR NVGKSSL N L+ ++ T A G T +D + N + Sbjct: 182 PKYTIVGRPNVGKSSLTNALLGKERNIVTPVA-GTT--------RDSIRIHYNQFGHEFL 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 + G R K N D ++R + V L++D + G++ D ++F +K Sbjct: 233 LIDTAGMRRKSKVNEDIEFYSVMRTIKALEDSDVVILMLDAQDGIEAQDINIFHLAEKNK 292 Query: 150 VSYQIVLTKID 160 IV+ K D Sbjct: 293 KGVMIVVNKWD 303 >gi|227496096|ref|ZP_03926402.1| bifunctional cytidylate kinase/GTP-binding protein [Actinomyces urogenitalis DSM 15434] gi|226834330|gb|EEH66713.1| bifunctional cytidylate kinase/GTP-binding protein [Actinomyces urogenitalis DSM 15434] Length = 720 Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats. Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 VPE AG P +A GR NVGKS+L+N ++ R+ +A + PG T+ + P +++ Sbjct: 271 VPEADGGLDAGLPVLAVVGRPNVGKSTLVNRVLGRR-VAVVQDTPGVTRDRVSY-PAEWA 328 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + +VD G+ K +D E + V L++D + G+ Sbjct: 329 GRR-----FTIVDTGGW---ELDVKGLDQAVATQAEVAVELAD--AVILVVDAQVGITAT 378 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 D V L + + K+D + AQE Sbjct: 379 DASVVKMLRRSGKPVVLAANKVD----SAAQE 406 >gi|297538116|ref|YP_003673885.1| ribosome-associated GTPase EngA [Methylotenera sp. 301] gi|297257463|gb|ADI29308.1| ribosome-associated GTPase EngA [Methylotenera sp. 301] Length = 484 Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust. Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 9/133 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A GR NVGKS+L+N L+ + + + PG T+ +L+ N L+ Sbjct: 180 PKVAIVGRPNVGKSTLVNALLGEERVI-AFDEPGTTRDSISI------DLEKNGKHYTLI 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + ++ + +++ + V L++D + G+ + D V +++ Sbjct: 233 DTAGVRKRGRVLEAIEKFS--VIKTIQSIEEANVVILVVDAQEGITEQDAHVAAYILDAG 290 Query: 150 VSYQIVLTKIDKL 162 + + + K D L Sbjct: 291 RALVVAINKWDGL 303 >gi|291234897|ref|XP_002737385.1| PREDICTED: large subunit GTPase 1 homolog [Saccoglossus kowalevskii] Length = 715 Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSS IN L+ K + S PGRT+H FV P++ L D Sbjct: 467 IGLVGYPNVGKSSTINALLQCKKVP-VSATPGRTKHFQTLFVE----------PSLCLCD 515 Query: 91 MPG 93 PG Sbjct: 516 CPG 518 >gi|259046866|ref|ZP_05737267.1| ribosome-associated GTPase EngA [Granulicatella adiacens ATCC 49175] gi|259036489|gb|EEW37744.1| ribosome-associated GTPase EngA [Granulicatella adiacens ATCC 49175] Length = 437 Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 8/131 (6%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 +F GR NVGKSSL+N ++ + + SN G T+ + F + + + ++D Sbjct: 179 SFIGRPNVGKSSLVNAMLGEERVI-VSNVAGTTRDA---IDTTFEDEEGTV--FKMIDTA 232 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G ++ + + L ERS + CV L + G+++ D+ + + + Sbjct: 233 GIRKKGRVFESTEKYSVLRALRAIERSDIVCVVL--NAEEGIQEQDKKIAGYAHEAGKGV 290 Query: 153 QIVLTKIDKLS 163 I++ K D L Sbjct: 291 VILVNKWDTLE 301 >gi|213023804|ref|ZP_03338251.1| hypothetical protein Salmonelentericaenterica_15212 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 50 Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 LVD+PGYGYA P++ W + YL +R +L+ Sbjct: 13 LVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQ 47 >gi|26553682|ref|NP_757616.1| GTP-binding protein EngA [Mycoplasma penetrans HF-2] gi|37999697|sp|Q8EWH6|DER_MYCPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|26453688|dbj|BAC44020.1| predicted ATP/GTP-binding protein [Mycoplasma penetrans HF-2] Length = 444 Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 17/182 (9%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++N + TSN T+ D SN K + ++D G Sbjct: 179 GRPNVGKSSLVNCILNEDRMI-TSNIANTTRD-----AID-SNFKKDNLLYTIIDTAGIR 231 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++NVD + L V RS L + +++D + D+ + K + IV Sbjct: 232 RKGKIQENVDKYAYLRVEQSISRSNL--IVIVLDGSEEFNEQDEVIAGLAHKANIPSIIV 289 Query: 156 LTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSSVKRKGIEVLR---KAILET 209 + K D + ++T+ K IR + + P ++ S+++ K I L K+I E Sbjct: 290 VNKWD-IVKEKDEKTMNKFIKTIRIKFKFLSWTP-IVFLSAIENKRINTLFNEIKSIREN 347 Query: 210 IN 211 +N Sbjct: 348 LN 349 >gi|110834491|ref|YP_693350.1| GTP-binding protein Era-like protein [Alcanivorax borkumensis SK2] gi|110647602|emb|CAL17078.1| GTP-binding protein Era homolog [Alcanivorax borkumensis SK2] Length = 310 Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 27/186 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKS+L+N L+ +K ++ TS P T+H ++ + +D + D Sbjct: 20 VSIVGRPNVGKSTLMNHLIGQK-VSITSRKPQTTRHRIHGILSRDNYQI-------VFAD 71 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSER--STLRCVYLLIDCRHGVKQI--DQDVFSFLD 146 PG + N R ++E STL V ++ +K D+ V S L Sbjct: 72 TPGIHTGQEKALN---------RAMNEAAVSTLFGVDVICMMVDAMKWTPADEHVLSLLP 122 Query: 147 KKA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + V +++ K+D + +A L + L YP VIP S+++ + + L KA Sbjct: 123 EGGDVPVLLIINKVDNVDDKSA--LLPHIQSLSERYP--FDAVIPVSALREQNLVELEKA 178 Query: 206 ILETIN 211 +++ + Sbjct: 179 LVDRLQ 184 >gi|298207544|ref|YP_003715723.1| GTP-binding protein EngA [Croceibacter atlanticus HTCC2559] gi|83850180|gb|EAP88048.1| GTP-binding protein EngA [Croceibacter atlanticus HTCC2559] Length = 434 Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 15/131 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ N ++ R+ A T G T+ + + N L+D Sbjct: 5 VAIVGRPNVGKSTFFNRMIQRRE-AITDAISGVTRD------RHYGKADWNGKEFTLIDT 57 Query: 92 PGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 GY G ++ +D L + + ++D G+ +D+DV L + Sbjct: 58 GGYVVGSDDIFEQEIDKQVELAI------DEADVILFMVDVTSGITGMDEDVAKLLRRSN 111 Query: 150 VSYQIVLTKID 160 +V+ K+D Sbjct: 112 KPMMLVVNKVD 122 >gi|159109711|ref|XP_001705119.1| GTP-binding protein [Giardia lamblia ATCC 50803] gi|157433198|gb|EDO77445.1| GTP-binding protein [Giardia lamblia ATCC 50803] Length = 507 Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 14/183 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I F G+ +VGKSSLIN + +K + PG T+HL ++P + L D Sbjct: 284 IGFFGQPSVGKSSLINGIYGKK-VVSVKLTPGHTKHLQTHYLPLSGVVEGETDRSFVLCD 342 Query: 91 MPGYGYA-RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG +A + + + G + R L + LL++C G K +D+ L+ + Sbjct: 343 CPGLVFAVKGSPRPLQVITG-VFPLARTREFLTPLRLLVECVPGFK---EDIVERLNLDS 398 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + ++++ P + E LE Y+ + T ++ R G+E+ + + + Sbjct: 399 LYTR--YPELNQKKPDSPGEILELYAYMWSYFSKGL-----TPNINRAGMELFKLIVNGS 451 Query: 210 INY 212 I Y Sbjct: 452 IAY 454 >gi|319943506|ref|ZP_08017788.1| GTP-binding protein Era [Lautropia mirabilis ATCC 51599] gi|319743321|gb|EFV95726.1| GTP-binding protein Era [Lautropia mirabilis ATCC 51599] Length = 309 Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKS+L+N L+ + L+ T++ T+H V L + LVD Sbjct: 23 VALVGRPNTGKSTLLNQLLG-QMLSITADRAQTTRHRIQGV------LSRPHAQLILVDS 75 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGY R ++ ++ R V +L+ ++ D ++ +L K Sbjct: 76 PGYQTQR-----INPLNKILNRTAQSVGQQADVVVLVTEAGRWRRQDDEILGWL-KGDAP 129 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP---EVIPTSSVKRKGIEVLRKAI 206 + L KID+L + + LI AHP ++P + +GIE L AI Sbjct: 130 VIVALNKIDQL------RNVNEVLPLIAQVHEAHPGLAAIVPICARNGQGIEALLDAI 181 >gi|238917975|ref|YP_002931492.1| tRNA modification GTPase [Eubacterium eligens ATCC 27750] gi|238873335|gb|ACR73045.1| tRNA modification GTPase [Eubacterium eligens ATCC 27750] Length = 459 Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 26/172 (15%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G++N GKSSL+N+L R+ A ++ G T+ ++ NL + L+D G Sbjct: 229 GKTNAGKSSLLNVLA-REERAIVTDIEGTTRD----TLEEMINLSG--VTLNLIDTAGI- 280 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R V+S G + L+E + L V ++D + D ++ + DKK + + Sbjct: 281 --RKTDDVVESIGVNKAKKLAEVADL--VIYVVDSSRSLDDNDYEIMELIKDKKVL---V 333 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +L K D TTA E K +I + E + S+ + GIE L + + Sbjct: 334 ILNKADLAQVTTA----EDIKKII------NCETVTISAKQETGIEELEETV 375 >gi|73667167|ref|YP_303183.1| GTP-binding protein Era [Ehrlichia canis str. Jake] gi|123614857|sp|Q3YRS0|ERA_EHRCJ RecName: Full=GTPase Era gi|72394308|gb|AAZ68585.1| Small GTP-binding protein domain:GTP-binding protein Era [Ehrlichia canis str. Jake] Length = 296 Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 17/151 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G +N GKS+LIN+LV RK A T ++ + L N + +D P Sbjct: 12 AIVGTTNAGKSTLINMLVGRKVAAVTPKVQTTRVRMH-------AVLNNENVQLIFIDTP 64 Query: 93 GYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +PK ++ + IV+ ++S + + V LL+D ++ + + + + S + + + Sbjct: 65 G---IFSPKTKLEKF---IVKHAWMSLKG-IENVILLLDVKNYLNKHIEKIISRIKQSNI 117 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +V+ KID +S + +E Y + N+ Sbjct: 118 NAILVVNKIDMVSQALVDKAIEYM-YSLHNF 147 >gi|297621993|ref|YP_003710130.1| tRNA modification GTPase TrmE [Waddlia chondrophila WSU 86-1044] gi|297377294|gb|ADI39124.1| tRNA modification GTPase TrmE [Waddlia chondrophila WSU 86-1044] Length = 452 Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 30/172 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L++++ A ++ PG T+ + +D +L+ N L+D G Sbjct: 226 GRPNVGKSSLMNALLDKER-AIVTDTPGTTRD----IVED--SLRINGLNFRLIDTAGI- 277 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK-KAVSYQI 154 R + ++ G + E++ L V L++D + GV D+ + + K K ++ Sbjct: 278 --REGAETIEQEGIRRSKEALEKADL--VLLVLDAKRGVTAEDEQLIDLVPKGKTIA--- 330 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V KID Q + P ++P S+ ++KG++ L + I Sbjct: 331 VWNKIDLPHDEAPQLGI--------------PYIVPISAKEKKGLKQLHEQI 368 >gi|166030917|ref|ZP_02233746.1| hypothetical protein DORFOR_00598 [Dorea formicigenerans ATCC 27755] gi|166029184|gb|EDR47941.1| hypothetical protein DORFOR_00598 [Dorea formicigenerans ATCC 27755] Length = 442 Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 18/152 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G+ NVGKSS+IN L+ + + S+ G T+ + + +N + Sbjct: 178 PRVAIVGKPNVGKSSIINKLLGEQRVI-VSDIAGTTRDAI------DTEIVHNGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D V ++ Sbjct: 231 DTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDATQGVTEQDAKVAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 IV+ K D +EK +R Y Sbjct: 289 KGVIIVVNKWD---------AIEKNDKTMREY 311 >gi|113474219|ref|YP_720280.1| GTP-binding protein EngA [Trichodesmium erythraeum IMS101] gi|123161345|sp|Q119L7|DER_TRIEI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|110165267|gb|ABG49807.1| small GTP-binding protein [Trichodesmium erythraeum IMS101] Length = 453 Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 22/166 (13%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +P G + + +IA GR NVGKSSL+N + K A S G T+ V Sbjct: 165 LPTQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKR-AIVSPISGTTRDAIDTV----- 218 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL--IVRYLSERSTLRCVYLLIDCRHGVK 135 ++ N L+D G KKNV+ I R V +ID GV Sbjct: 219 -VERNGKTYRLIDTAGI----RKKKNVEYGAEFFGINRAFKAIRRAEVVMFVIDALDGVT 273 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + DQ + + + + + IV+ K D +EK Y I Y Sbjct: 274 EQDQKLANRIIEDGRACVIVVNKWD---------AIEKDNYTIYTY 310 >gi|311113301|ref|YP_003984523.1| ribosome-associated GTPase EngA [Rothia dentocariosa ATCC 17931] gi|310944795|gb|ADP41089.1| ribosome-associated GTPase EngA [Rothia dentocariosa ATCC 17931] Length = 529 Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 77/185 (41%), Gaps = 29/185 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG----RTQHLNFFVPKDFSNLKNNLPA 85 P +A GR NVGKS++IN ++ R+ A + PG R + +V K F+ Sbjct: 76 PVVAIVGRPNVGKSTIINRILGRRE-AVVEDKPGVTRDRVSYKAEWVGKRFT-------- 126 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G+ + + +D+ E++ + V L++D R G+ D+ + L Sbjct: 127 --LVDTGGW---ESDARGIDAQVADQAEIAVEQADV--VILVVDARVGITASDEQIVRML 179 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + ++ KID LE Y + + P P S + +G+ Sbjct: 180 RRVKKPIILMANKID-------DSHLEPEIYSLWSLGMGQP--FPVSGLHGRGLADALDE 230 Query: 206 ILETI 210 +LE + Sbjct: 231 LLEVM 235 >gi|297380037|gb|ADI34924.1| GTP-binding protein EngA [Helicobacter pylori v225d] Length = 461 Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSMAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + V L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--VLLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 365 >gi|262282140|ref|ZP_06059909.1| GTP-binding protein engA [Streptococcus sp. 2_1_36FAA] gi|262262594|gb|EEY81291.1| GTP-binding protein engA [Streptococcus sp. 2_1_36FAA] Length = 436 Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK Y ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNYTMKDW 309 >gi|294891639|ref|XP_002773664.1| eukaryotic translation initiation factor 5B, putative [Perkinsus marinus ATCC 50983] gi|239878868|gb|EER05480.1| eukaryotic translation initiation factor 5B, putative [Perkinsus marinus ATCC 50983] Length = 801 Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 14/142 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKD-FSNLKNN 82 P P I G ++ GK+ L++ + R + + A G +QH+ +P++ ++ N Sbjct: 218 PSLRAPVICVLGHTDAGKTKLLDRI--RSSKVQEGEAGGISQHIGATMLPRETIRSMSEN 275 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQD 140 + AL ++PG +D+ G L R + C +++D HGV++ ++ Sbjct: 276 VEEDAL-EIPGLLL-------LDTPGHETFNSLRHRGSSICDVGVVVVDIMHGVEKQTRE 327 Query: 141 VFSFLDKKAVSYQIVLTKIDKL 162 L ++ + I L KID+L Sbjct: 328 AIELLKEQRRPFVIALNKIDRL 349 >gi|154494318|ref|ZP_02033638.1| hypothetical protein PARMER_03672 [Parabacteroides merdae ATCC 43184] gi|154085762|gb|EDN84807.1| hypothetical protein PARMER_03672 [Parabacteroides merdae ATCC 43184] Length = 437 Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 31/188 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQH----LNFFVPKDFSNLK 80 P IA GR N GKSSLIN + ++A T+ T++ LNF+ Sbjct: 176 PRIAIIGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFY--------- 226 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVD G + K N D ++R + L++D G++ D + Sbjct: 227 -------LVDTA--GIRKKGKVNEDLEYYSVIRSIRAIENSDVCVLMLDATRGIESQDLN 277 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSVKRK 197 +FS + K + + K D L +Q+ ++ IR T P + ++ K++ Sbjct: 278 IFSLVQKNKKGLVVCVNKWD-LVEDKSQKVIDTFMSAIRERLAPFTDFPILFISALTKQR 336 Query: 198 GIEVLRKA 205 ++VL A Sbjct: 337 ILKVLETA 344 >gi|115377683|ref|ZP_01464876.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1] gi|310821559|ref|YP_003953917.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1] gi|115365289|gb|EAU64331.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1] gi|309394631|gb|ADO72090.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1] Length = 462 Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 9/137 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G +A GR NVGKS+++N ++ K + S PG T+ P D S L Sbjct: 177 LPDDGTLRVAIIGRPNVGKSTMVNAILKEKRVV-ASEVPGTTRD-----PID-SALTYKG 229 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + L D G R+ V+ + + + +RS + LL+D D + Sbjct: 230 HKLILTDTAGIRRKRSIAHRVEQFSVVSALKVMDRSDV--AVLLMDATEPAVDQDAKLAG 287 Query: 144 FLDKKAVSYQIVLTKID 160 + K + IV+ K D Sbjct: 288 LAEDKGRALVIVVNKWD 304 >gi|303229883|ref|ZP_07316659.1| ribosome-associated GTPase EngA [Veillonella atypica ACS-134-V-Col7a] gi|302515439|gb|EFL57405.1| ribosome-associated GTPase EngA [Veillonella atypica ACS-134-V-Col7a] Length = 444 Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN++ ++ + PG T+ +F D L ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKR-ISIVEDIPGVTRDRIYF---DAEWLNREF---TMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L E + + ++D + G+ D++V + L Sbjct: 57 DTGGIEFVTENSHVIPKMMRLQAELAIEEAD--VILFVVDGKQGIVPADEEVANILRTSG 114 Query: 150 VSYQIVLTKIDKLS 163 +V+ KID ++ Sbjct: 115 KPVVLVVNKIDSVN 128 >gi|154419618|ref|XP_001582825.1| hypothetical protein [Trichomonas vaginalis G3] gi|121917063|gb|EAY21839.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 520 Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 9/62 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G NVGKSS +N V R R+S+ PG+T+HL N++ + L D Sbjct: 282 IGFVGFPNVGKSSCLNSAVGRV-CVRSSSTPGKTKHLQTI------NIEEE--GITLCDC 332 Query: 92 PG 93 PG Sbjct: 333 PG 334 >gi|91775967|ref|YP_545723.1| small GTP-binding protein domain-containing protein [Methylobacillus flagellatus KT] gi|91709954|gb|ABE49882.1| Small GTP-binding protein domain [Methylobacillus flagellatus KT] Length = 499 Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust. Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A GR NVGKS+L+N L+ + + + PG T+ + +L+ N ++ Sbjct: 179 PKVAIVGRPNVGKSTLVNALLGEERVI-AFDQPGTTRDSIYL------DLERNGKRYTII 231 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + V+ + +++ + L++D + G+ + D V +++ Sbjct: 232 DTAGVRRRGKVFEAVEKFS--VIKTMQAIEEANVAILVVDAQEGITEQDAHVSAYILDSG 289 Query: 150 VSYQIVLTKIDKLS 163 + + + K D L Sbjct: 290 RALVVAVNKWDGLE 303 >gi|57529605|ref|NP_001006549.1| large subunit GTPase 1 homolog [Gallus gallus] gi|75571279|sp|Q5ZJD3|LSG1_CHICK RecName: Full=Large subunit GTPase 1 homolog gi|53133662|emb|CAG32160.1| hypothetical protein RCJMB04_19c19 [Gallus gallus] Length = 653 Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PGRT+H + P Sbjct: 378 KDGEVNVGLVGYPNVGKSSTINTILGDKKVS-VSATPGRTKHFQTLYVE---------PG 427 Query: 86 MALVDMPG 93 + L D PG Sbjct: 428 LCLCDCPG 435 >gi|291524971|emb|CBK90558.1| GTP-binding protein Era [Eubacterium rectale DSM 17629] gi|291529105|emb|CBK94691.1| GTP-binding protein Era [Eubacterium rectale M104/1] Length = 303 Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 28/187 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ V D + +D Sbjct: 10 VTIIGRPNVGKSTLMNRLIGQK-IAITSNKPQTTRNRIQTVYTDMEK-----GQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + G +V ++E++ + V L++ + + +Q + L K Sbjct: 64 PGIHKAK------NKLGEYMVN-VAEKTLNEVDVVLWLVEPTNFIGAGEQHIIEQLKKVN 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYL--IRNYPTAH--PEVIPTSSVKRKGIEVLRKA 205 +++ K+D T+EK K L I Y + E+IPTS+++ + + + + Sbjct: 117 TPVILIINKVD---------TVEKEKVLEYIDTYRKVYDFAEIIPTSALRGQNTDDVINS 167 Query: 206 ILETINY 212 I + + Y Sbjct: 168 IFKYLPY 174 >gi|227495416|ref|ZP_03925732.1| bifunctional cytidylate kinase/GTP-binding protein [Actinomyces coleocanis DSM 15436] gi|226830963|gb|EEH63346.1| bifunctional cytidylate kinase/GTP-binding protein [Actinomyces coleocanis DSM 15436] Length = 727 Score = 37.7 bits (86), Expect = 1.00, Method: Composition-based stats. Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 5/44 (11%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNR-----KNLARTSNAP 62 +PK GP IA GR NVGKSSL+N L +LA T+ P Sbjct: 461 MPKDGPRRIALIGRPNVGKSSLLNQLAGSDRVVVNDLAGTTRDP 504 Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 +AG P +A GR NVGKS+L+N ++ R+ A + PG T+ Sbjct: 288 QAGLPVLAIIGRPNVGKSTLVNRILERR-AAVVQDTPGVTR 327 >gi|146319380|ref|YP_001199092.1| GTP-binding protein EngA [Streptococcus suis 05ZYH33] gi|146321585|ref|YP_001201296.1| GTP-binding protein EngA [Streptococcus suis 98HAH33] gi|253752406|ref|YP_003025547.1| GTP-binding protein EngA [Streptococcus suis SC84] gi|253754232|ref|YP_003027373.1| GTP-binding protein EngA [Streptococcus suis P1/7] gi|253756166|ref|YP_003029306.1| GTP-binding protein EngA [Streptococcus suis BM407] gi|166225866|sp|A4W3F7|DER_STRS2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225868|sp|A4VX53|DER_STRSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145690186|gb|ABP90692.1| Predicted GTPase [Streptococcus suis 05ZYH33] gi|145692391|gb|ABP92896.1| Predicted GTPase [Streptococcus suis 98HAH33] gi|251816695|emb|CAZ52336.1| GTP-binding protein EngA [Streptococcus suis SC84] gi|251818630|emb|CAZ56464.1| GTP-binding protein EngA [Streptococcus suis BM407] gi|251820478|emb|CAR47214.1| GTP-binding protein EngA [Streptococcus suis P1/7] gi|319758811|gb|ADV70753.1| GTP-binding protein EngA [Streptococcus suis JS14] Length = 436 Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 19/158 (12%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 169 EENPDIIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTHFTDPEGQ- 223 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G + +N + + + ERS + + ++I+ G+++ D+ + Sbjct: 224 -EFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIERSDV--ILMVINAEEGIREYDKRIAG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++ + Sbjct: 281 FAHEAGKGMIIVVNKWD---------TLEKDNHTMKQW 309 >gi|154253924|ref|YP_001414748.1| small GTP-binding protein [Parvibaculum lavamentivorans DS-1] gi|171769688|sp|A7HYV8|DER_PARL1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|154157874|gb|ABS65091.1| small GTP-binding protein [Parvibaculum lavamentivorans DS-1] Length = 473 Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 15/119 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L N LV +K LA + PG V +D + L ++ Sbjct: 4 KVAIVGRPNVGKSTLFNRLVGKK-LALVDDTPG--------VTRDRREGEARLGDLSFTI 54 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDK 147 + G A +++ +R +ER+ LLID R GV +D+ L K Sbjct: 55 IDTAGLEEAATGTLEAR----MRIGTERAIADADLCLLLIDARAGVTPLDKSFSQILRK 109 >gi|157156541|ref|YP_001464348.1| putative GTPase [Escherichia coli E24377A] gi|157078571|gb|ABV18279.1| putative GTPase [Escherichia coli E24377A] Length = 290 Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMIIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSACT 202 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 203 GWELDTLVSALMTAL 217 >gi|224535783|ref|ZP_03676322.1| hypothetical protein BACCELL_00647 [Bacteroides cellulosilyticus DSM 14838] gi|224522603|gb|EEF91708.1| hypothetical protein BACCELL_00647 [Bacteroides cellulosilyticus DSM 14838] Length = 437 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 19/144 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DFY------- 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D GV+ D ++FS Sbjct: 227 ---LVDTAGIRKKNKVNEDLEYYS--VIRSIRSIENADVCILMLDATRGVESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 + K A +V+ K D + T + Sbjct: 282 IQKNAKGLVVVVNKWDLVQDKTVK 305 >gi|237752638|ref|ZP_04583118.1| GTP-binding protein engA [Helicobacter winghamensis ATCC BAA-430] gi|229376127|gb|EEO26218.1| GTP-binding protein engA [Helicobacter winghamensis ATCC BAA-430] Length = 462 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 26/181 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR N GKSSL N ++ +A TS G T+ + K L +LP + L D Sbjct: 8 IAIVGRPNAGKSSLFNRFC-KQRIAITSEIAGTTRDV-----KKARILLQDLPFL-LFDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G A ++V S+R+ + + L+D + +Q D+++F L+KK Sbjct: 61 GGLDDKDALFQSVSKH--------SQRTGESADLILYLVDGKTPPEQADKEIFYSLEKKN 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +V+ KID + Q E ++ +N V S +GI L KAI++ Sbjct: 113 PNIFLVINKID--NDKEKQNAWEFMEFGAKN-------VFYISVAHNRGILELEKAIVKA 163 Query: 210 I 210 + Sbjct: 164 L 164 >gi|78223518|ref|YP_385265.1| GTP-binding protein Era [Geobacter metallireducens GS-15] gi|123571481|sp|Q39T84|ERA_GEOMG RecName: Full=GTPase Era gi|78194773|gb|ABB32540.1| GTP-binding protein Era [Geobacter metallireducens GS-15] Length = 298 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 25/181 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 ++ GR NVGKS+L+N ++ K + TS+ P T++ + +N+P + + Sbjct: 11 VSIIGRPNVGKSTLLNRILGEK-IVITSDKPQTTRNRIQGI--------HNVPGAQIVFI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG AR+ ++ + ++ LS + V L++ + +Q++ L Sbjct: 62 DTPGIHQARS---RLNKY--MVEVALSAIREVDLVLFLVEANQKPGEQEQEIIDVLAGAT 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 +V+ K+D T LE+ YP E++P S+ G +E++RKA Sbjct: 117 APVFLVINKVDL---TEKGAVLERIAAYKDRYP--FREIVPISAGTGDGVDHLVELVRKA 171 Query: 206 I 206 + Sbjct: 172 L 172 >gi|15894577|ref|NP_347926.1| GTP-binding protein Era [Clostridium acetobutylicum ATCC 824] gi|21263597|sp|Q97JI5|ERA_CLOAB RecName: Full=GTPase Era gi|15024224|gb|AAK79266.1|AE007641_12 ERA GTPase [Clostridium acetobutylicum ATCC 824] gi|325508709|gb|ADZ20345.1| GTP-binding protein Era [Clostridium acetobutylicum EA 2018] Length = 296 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 31/187 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA----MA 87 + GR NVGKS+L+N ++ K L+ S+ P T+ +N++ L + Sbjct: 7 VTIIGRPNVGKSTLLNHIMGEK-LSIVSSKPQTTR----------NNIQTILTGEEYQIV 55 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH-GVKQIDQDVFSFLD 146 VD PG R G +V+ E V L + VK+ D + L Sbjct: 56 FVDTPGMHNPR------HKLGEYMVKVAKESMNEVDVALFVTTPDVEVKRGDLHILEQLK 109 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRK 204 V +V+ KID+ T +E L T ++NY A E+IP S+ K K ++ L + Sbjct: 110 SAKVPVFLVVNKIDE----TTEERLAAT---LKNYSEAFEFQEIIPISAQKGKNVDKLIE 162 Query: 205 AILETIN 211 +++ +N Sbjct: 163 LMVKHLN 169 >gi|223933730|ref|ZP_03625704.1| small GTP-binding protein [Streptococcus suis 89/1591] gi|302024351|ref|ZP_07249562.1| GTP-binding protein EngA [Streptococcus suis 05HAS68] gi|330833346|ref|YP_004402171.1| GTP-binding protein EngA [Streptococcus suis ST3] gi|223897611|gb|EEF63998.1| small GTP-binding protein [Streptococcus suis 89/1591] gi|329307569|gb|AEB81985.1| GTP-binding protein EngA [Streptococcus suis ST3] Length = 436 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 12/157 (7%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 169 EENPDIIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTHFTDPEGQ- 223 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G + +N + + + ERS + + ++I+ G+++ D+ + Sbjct: 224 -EFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIERSDV--ILMVINAEEGIREYDKRIAG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 F + IV+ K D L T++K + IR+ Sbjct: 281 FAHEAGKGMIIVVNKWDTLEKD--NHTMKKWEDDIRD 315 >gi|292559009|gb|ADE32010.1| Small GTP-binding domain containing protein [Streptococcus suis GZ1] Length = 436 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 19/158 (12%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 169 EENPDIIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTHFTDPEGQ- 223 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G + +N + + + ERS + + ++I+ G+++ D+ + Sbjct: 224 -EFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIERSDV--ILMVINAEEGIREYDKRIAG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++ + Sbjct: 281 FAHEAGKGMIIVVNKWD---------TLEKDNHTMKQW 309 >gi|227890109|ref|ZP_04007914.1| GTP-binding protein Era [Lactobacillus johnsonii ATCC 33200] gi|268319372|ref|YP_003293028.1| GTP-binding protein [Lactobacillus johnsonii FI9785] gi|227849553|gb|EEJ59639.1| GTP-binding protein Era [Lactobacillus johnsonii ATCC 33200] gi|262397747|emb|CAX66761.1| GTP-binding protein [Lactobacillus johnsonii FI9785] Length = 303 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 18/175 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A S P T++ K ++ + +D Sbjct: 13 VALIGRPNVGKSTLLNYLVGQK-VAIMSPQPQTTRN------KISGIYTDDQEQIVFIDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK +D + + S + V +++ K DQ + L K Sbjct: 66 PG---IHKPKNKLDDF--MDKSSYSALDEVDVVLFMVEPEPAGKG-DQYIAELLKKIKKP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KIDK+ P ++ K L E++P S+ + + L K I Sbjct: 120 VFLVINKIDKVHPDELLSIIDSYKNL-----GDFAEIVPISASQGNNVSELIKTI 169 >gi|153816157|ref|ZP_01968825.1| hypothetical protein RUMTOR_02405 [Ruminococcus torques ATCC 27756] gi|317500477|ref|ZP_07958701.1| GTP-binding protein engA [Lachnospiraceae bacterium 8_1_57FAA] gi|331089422|ref|ZP_08338321.1| GTP-binding protein engA [Lachnospiraceae bacterium 3_1_46FAA] gi|145846492|gb|EDK23410.1| hypothetical protein RUMTOR_02405 [Ruminococcus torques ATCC 27756] gi|316898232|gb|EFV20279.1| GTP-binding protein engA [Lachnospiraceae bacterium 8_1_57FAA] gi|330404790|gb|EGG84328.1| GTP-binding protein engA [Lachnospiraceae bacterium 3_1_46FAA] Length = 441 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 18/160 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G+ NVGKSS+IN L+ +N S+ G T+ D L N + + Sbjct: 178 PRVAIVGKPNVGKSSIINKLLG-ENRVIVSDIAGTTRD-----AIDTEILHNGKEYI-FI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLMVIDATEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 IV+ K D +EK +R Y + +V+ Sbjct: 289 KGVIIVVNKWD---------AIEKNDRTMREYESDIRQVL 319 >gi|329894312|ref|ZP_08270182.1| GTP-binding protein Era [gamma proteobacterium IMCC3088] gi|328923108|gb|EGG30431.1| GTP-binding protein Era [gamma proteobacterium IMCC3088] Length = 300 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 16/134 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N ++ +K ++ TS P T+H L DF + V Sbjct: 11 VAIVGRPNVGKSTLLNHILGQK-ISITSRKPQTTRHTLLGIHTEGDFQ--------LVFV 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG KK ++ + + + C +++D H D+ VF + + + Sbjct: 62 DTPGIHSEH--KKALNEYMNHAATQAMADTDIIC--MIVDRTHWNAD-DERVFKHVKRHS 116 Query: 150 VSYQIVLTKIDKLS 163 +V+ K+D L+ Sbjct: 117 AKLVLVVNKVDLLN 130 >gi|325123051|gb|ADY82574.1| GTP-binding protein Era [Acinetobacter calcoaceticus PHEA-2] Length = 340 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 20/183 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 40 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 92 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK--QIDQDVFSFLDKKA 149 PG KK V + ++ R + S LR V L++ K Q D V L Sbjct: 93 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDAYKWTQNDDLVLEKLKNAE 145 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 146 MPVILVINKADTFEDKREILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEKY 201 Query: 210 INY 212 + Y Sbjct: 202 LPY 204 >gi|312221126|emb|CBY01067.1| similar to ribosome biogenesis GTPase Lsg1 [Leptosphaeria maculans] Length = 685 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 13 IFLRGVPEIGLLPKAGPPE--IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +FL P++ P P + I G NVGKSS IN L+ K ++ S PG+T+H Sbjct: 361 LFLEHSPDVDTGPNGEPRKTSIGLVGYPNVGKSSTINALIGAKKVS-VSATPGKTKHFQ 418 >gi|225557857|gb|EEH06142.1| large subunit GTPase [Ajellomyces capsulatus G186AR] Length = 664 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 14/85 (16%) Query: 13 IFLRGVPEI----GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +FL P I G K+ P I G NVGKSS IN L+ K ++ S PG+T+H Sbjct: 330 LFLAAAPHIQPKEGDQGKSRPTTIGLVGYPNVGKSSTINALLGAKKVS-VSATPGKTKHF 388 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPG 93 P + L D PG Sbjct: 389 QTLYLS---------PNLLLCDCPG 404 >gi|148656272|ref|YP_001276477.1| GTP-binding protein EngA [Roseiflexus sp. RS-1] gi|148568382|gb|ABQ90527.1| small GTP-binding protein [Roseiflexus sp. RS-1] Length = 493 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 9/129 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N L+ ++ + S+ PG T+ + P + +K L+D Sbjct: 185 IAIVGRPNVGKSSLLNRLIGQER-SVVSDVPGTTRD-SIDTPVEIDGIK-----ALLIDT 237 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ ++ + ++R L LLID GV D + + + Sbjct: 238 AGIRRRGKIERGLERYS--VMRALRAIERADVALLLIDATEGVTAQDTHIAGMILESLKG 295 Query: 152 YQIVLTKID 160 I++ K D Sbjct: 296 VAILVNKWD 304 >gi|170104693|ref|XP_001883560.1| predicted protein [Laccaria bicolor S238N-H82] gi|164641624|gb|EDR05884.1| predicted protein [Laccaria bicolor S238N-H82] Length = 666 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 69/169 (40%), Gaps = 19/169 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV----PKDFSNLK 80 P+A I G + GKS+ IN++ ++ + T HL V P DF LK Sbjct: 12 PEANDIIIPLMGPTGAGKSTFINLIAGKEVTTVGHDLKSCTTHLLPVVIDSLPSDF--LK 69 Query: 81 NNLPAMALVDMPGYGYARAPK----KNVDSWGGLIVRYLSERSTLRCVYLLIDCR----H 132 + LVD PG+G +++ SW L Y S+ S L + L D Sbjct: 70 GR--RLVLVDTPGFGDTYVDDADVLRSIGSW--LETMYESQHSKLAGIVYLHDISLARML 125 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 G + DVF L K ++VL K S +E +TK L NY Sbjct: 126 GSTLKNLDVFQKLCGKGALKRVVLCTT-KWSDIYPEEGAMRTKQLEDNY 173 >gi|153823698|ref|ZP_01976365.1| GTP-binding protein Era [Vibrio cholerae B33] gi|126518786|gb|EAZ76009.1| GTP-binding protein Era [Vibrio cholerae B33] Length = 282 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V D N A+ VD Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETD-----GNYQAI-YVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 87 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFTKLQKANF 140 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D++ LE +K + +++P S+ + K +VL+K + Sbjct: 141 PVVLCVNKVDQVKDRNEVMLHMLELSKRM------QFVDIVPISAKQGKNTDVLKKHV 192 >gi|42519246|ref|NP_965176.1| GTP-binding protein Era [Lactobacillus johnsonii NCC 533] gi|41583534|gb|AAS09142.1| GTP-binding protein era-like protein [Lactobacillus johnsonii NCC 533] gi|329667244|gb|AEB93192.1| GTP-binding protein era protein [Lactobacillus johnsonii DPC 6026] Length = 303 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 18/175 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A S P T++ K ++ + +D Sbjct: 13 VALIGRPNVGKSTLLNYLVGQK-VAIMSPQPQTTRN------KISGIYTDDQEQIVFIDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK +D + + S + V +++ K DQ + L K Sbjct: 66 PGI---HKPKNKLDDF--MDKSSYSALDEVDVVLFMVEPEPAGKG-DQYIAELLKKIKKP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KIDK+ P ++ K L E++P S+ + + L K I Sbjct: 120 VFLVINKIDKVHPDELLSIIDSYKNL-----GDFAEIVPISASQGNNVSELIKTI 169 >gi|332666380|ref|YP_004449168.1| GTP-binding protein Era-like-protein [Haliscomenobacter hydrossis DSM 1100] gi|332335194|gb|AEE52295.1| GTP-binding protein Era-like-protein [Haliscomenobacter hydrossis DSM 1100] Length = 298 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 24/179 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALVDMPG 93 G NVGKS+L+N LV + ++ +N P T+H + +DF + ++ P +VD P Sbjct: 11 GHPNVGKSTLMNALVGER-MSIITNKPQTTRHRIIGILSGEDFQMVLSDTP--GVVDKPA 67 Query: 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 Y +A V S E + L + L+ D D + ++ V Sbjct: 68 YKMHQAMNSFVQS--------TFEDADL--MLLVTDVLETYPAEDHLLAQLRKQQEVPMF 117 Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVLRKAILETI 210 +VL KID + EK L + + P+ +IP S++K+ ++L + E + Sbjct: 118 VVLNKIDLVDE-------EKLAQLQQFWAEQLPQATLIPISALKKTNTDLLLNTLKENL 169 >gi|148238904|ref|YP_001224291.1| GTP-binding protein EngA [Synechococcus sp. WH 7803] gi|166225928|sp|A5GJ79|DER_SYNPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|147847443|emb|CAK22994.1| GTP-binding protein engA [Synechococcus sp. WH 7803] Length = 455 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 13/137 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + + R +P R + D S ++ N P L Sbjct: 177 PIQLAIIGRPNVGKSSLLNAICGEQ---RAIVSPIRGTTRDTI---DTSLVRENRP-WRL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R+ + +G I R ERS + CV L+ID GV + DQ + ++ Sbjct: 230 VDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLS 163 + + +V+ K D + Sbjct: 286 EDGRACVVVVNKWDAVE 302 >gi|160902430|ref|YP_001568011.1| ferrous iron transport protein B [Petrotoga mobilis SJ95] gi|160360074|gb|ABX31688.1| ferrous iron transport protein B [Petrotoga mobilis SJ95] Length = 669 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 8/63 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI+ G NVGK+SL N+L K +N PG T V K N K LVD Sbjct: 18 EISIIGNPNVGKTSLFNLLTGTKQ--YVANWPGVT------VEKKVGNFKYKGKTFKLVD 69 Query: 91 MPG 93 +PG Sbjct: 70 LPG 72 >gi|110640536|ref|YP_668264.1| hypothetical protein ECP_0331 [Escherichia coli 536] gi|191171299|ref|ZP_03032849.1| putative GTPase [Escherichia coli F11] gi|28316254|emb|CAD66199.1| hypothetical protein [Escherichia coli] gi|110342128|gb|ABG68365.1| hypothetical protein ECP_0331 [Escherichia coli 536] gi|190908599|gb|EDV68188.1| putative GTPase [Escherichia coli F11] Length = 290 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILQRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDVAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|325280073|ref|YP_004252615.1| GTP-binding protein engA [Odoribacter splanchnicus DSM 20712] gi|324311882|gb|ADY32435.1| GTP-binding protein engA [Odoribacter splanchnicus DSM 20712] Length = 435 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 28/187 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNF---FVPKDFSNLKN 81 P I GR NVGKSS IN L+ + ++A T+ T++ F F+ D + L+ Sbjct: 176 PRITIVGRPNVGKSSTINALIGEERNIVTDIAGTTRDTLNTRYNRFGYDFLLVDTAGLRK 235 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 A D+ Y R+ +R + E C+ LLID G++ D ++ Sbjct: 236 --KAKVSEDVEFYSVMRS------------IRAIEESDV--CI-LLIDATRGMEAQDLNI 278 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSV-KRKGI 199 F +++ IV+ K D L + +E K L P ++I S++ K++ + Sbjct: 279 FHLIERNRKGVVIVVNKWD-LVEKDGKTLIEYEKSLREKIAPFKDVDIIFASALTKQRLL 337 Query: 200 EVLRKAI 206 +VL A+ Sbjct: 338 KVLEAAL 344 >gi|146341376|ref|YP_001206424.1| GTP-binding protein Era [Bradyrhizobium sp. ORS278] gi|189037292|sp|A4YWC7|ERA_BRASO RecName: Full=GTPase Era gi|146194182|emb|CAL78203.1| GTP-binding protein (era) [Bradyrhizobium sp. ORS278] Length = 307 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 39/190 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V + S + LVD Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGQSQI-------ILVDT 69 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG +PK+ +D +W G + + L CV L+D + G +D + + + Sbjct: 70 PGI---FSPKRRLDRAMVTTAWSG------AHDADLVCV--LLDAKKG---LDDEAQAII 115 Query: 146 DKKA-VSYQ--IVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVKRKGIE 200 DK A V+++ +V+ K+D L P EK L+ N A S++ G++ Sbjct: 116 DKAASVAHEKILVVNKVD-LVPR------EKLLALVAAANEKLAFARTFMISALSGDGVD 168 Query: 201 VLRKAILETI 210 LR+A+ E + Sbjct: 169 DLRRALAEMV 178 >gi|150390617|ref|YP_001320666.1| small GTP-binding protein [Alkaliphilus metalliredigens QYMF] gi|166920095|sp|A6TS39|DER_ALKMQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|149950479|gb|ABR49007.1| small GTP-binding protein [Alkaliphilus metalliredigens QYMF] Length = 440 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 9/130 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ NVGKSS++N ++ +N S+ G T+ + F++ ++ L+D Sbjct: 178 KVAIIGKPNVGKSSIVNSILG-ENRVIVSDIAGTTRDA---IDTPFNDGEDQY---VLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+N++ + ++R ++ L+ID GV + D V F + Sbjct: 231 TAGLRRKSKIKENIEKYS--VIRSIAAVERADVCLLVIDATEGVTEQDTKVAGFSHENGK 288 Query: 151 SYQIVLTKID 160 IV+ K D Sbjct: 289 GTIIVVNKWD 298 >gi|297517161|ref|ZP_06935547.1| GTP-binding protein EngA [Escherichia coli OP50] Length = 202 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|124515035|gb|EAY56546.1| GTP-binding protein (EngA) [Leptospirillum rubarum] Length = 466 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 K PP +A GR NVGKS+L+N L+ + L TS PG T+ Sbjct: 197 KDDPPRVAVIGRPNVGKSTLVNRLLGEERLV-TSPIPGTTR 236 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 15/134 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP IA GR NVGKS+L N L++R+ A + PG T+ + +S + L Sbjct: 5 PPLIAILGRPNVGKSTLFNRLLSRRE-AIVEDRPGVTRD------RHYSQGTIGRKSFRL 57 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G + D G +R L V ++D R G +D DV + Sbjct: 58 VDTGGILFGD------DHPLGESIRKQALFALEEADAVIYVMDGREGYLPVDADVIGRIR 111 Query: 147 KKAVSYQIVLTKID 160 + + K+D Sbjct: 112 RSGKPSVFAVNKVD 125 >gi|88809283|ref|ZP_01124792.1| GTP-binding protein EngA [Synechococcus sp. WH 7805] gi|88787225|gb|EAR18383.1| GTP-binding protein EngA [Synechococcus sp. WH 7805] Length = 455 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 13/137 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + + R +P R + D S ++ N P L Sbjct: 177 PIQLAIIGRPNVGKSSLLNAICGEQ---RAIVSPIRGTTRDTI---DTSLVRENRP-WRL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R+ + +G I R ERS + CV L+ID GV + DQ + ++ Sbjct: 230 VDTAGIRRRRSVSYGPEFFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLS 163 + + +V+ K D + Sbjct: 286 EDGRACVVVVNKWDAVE 302 >gi|317472657|ref|ZP_07931972.1| small GTP-binding protein [Anaerostipes sp. 3_2_56FAA] gi|316899834|gb|EFV21833.1| small GTP-binding protein [Anaerostipes sp. 3_2_56FAA] Length = 395 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 20/140 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR N GKSS++N L ++ LA S+ G T F K L L Sbjct: 7 PRGDRIHIALFGRRNAGKSSIVNALTGQE-LAIVSDVKGTTTDPVF---KAMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLR---CVYLLIDCRHGVKQIDQD 140 + ++D PG +D G L + + + + LR ++ D G+ + +Q Sbjct: 61 PVVMIDTPG----------LDDEGELGEKRVKKAKEVLRKTDIALVIADAETGITEFEQG 110 Query: 141 VFSFLDKKAVSYQIVLTKID 160 + + ++ + Y IV K D Sbjct: 111 ILDLIRERKLPYLIVYNKTD 130 >gi|293609825|ref|ZP_06692127.1| GTP-binding protein,16S rRNA-binding [Acinetobacter sp. SH024] gi|292828277|gb|EFF86640.1| GTP-binding protein,16S rRNA-binding [Acinetobacter sp. SH024] Length = 342 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 20/183 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK--QIDQDVFSFLDKKA 149 PG KK V + ++ R + S LR V L++ K Q D V L Sbjct: 95 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDAYKWTQNDDLVLEKLKNAE 147 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 148 MPVILVINKADTFEDKREILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEKY 203 Query: 210 INY 212 + Y Sbjct: 204 LPY 206 >gi|226324619|ref|ZP_03800137.1| hypothetical protein COPCOM_02403 [Coprococcus comes ATCC 27758] gi|225207067|gb|EEG89421.1| hypothetical protein COPCOM_02403 [Coprococcus comes ATCC 27758] Length = 442 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 11/158 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G+ NVGKSS+IN L+ K+ S+ G T+ + + +N + Sbjct: 178 PRVAIVGKPNVGKSSIINRLIG-KDRVIVSDIAGTTRDAI------DTEVVHNGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDAAEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAH 185 IV+ K D + T +E + + ++ P A Sbjct: 289 KGVIIVVNKWDAIEKNDKTTREYEHQIRMVLSFLPYAE 326 >gi|220927100|ref|YP_002502402.1| GTP-binding protein Era [Methylobacterium nodulans ORS 2060] gi|219951707|gb|ACL62099.1| GTP-binding protein Era [Methylobacterium nodulans ORS 2060] Length = 320 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 23/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N LV K ++ S T+ L + + S + VD Sbjct: 30 VALIGVPNAGKSTLLNSLVGSK-VSIVSRKVQTTRALVRGIAMEGSA------QIVFVDT 82 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ +D ++ S + V LLID R GV D +V + LD+ Sbjct: 83 PGIF---APKRRLDR--AMVTSAWSGAADADAVCLLIDARKGV---DAEVDALLDRLPEL 134 Query: 152 YQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +VL KID ++ + LE L P H ++ S++ G+ LR+ + Sbjct: 135 RRPKILVLNKIDVIA---RERLLELAASLNARLPFDHTFMV--SALTGDGVADLRRVL 187 >gi|312898738|ref|ZP_07758127.1| selenocysteine-specific translation elongation factor [Megasphaera micronuciformis F0359] gi|310620169|gb|EFQ03740.1| selenocysteine-specific translation elongation factor [Megasphaera micronuciformis F0359] Length = 662 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 24/181 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA---MAL 88 I +G + GK++LI L + T R +N F+ L +LP + + Sbjct: 31 IGTAGHVDHGKTTLIKALTGIET-DTTKEEKKRGMSINL----GFAYL--DLPHGHRVGI 83 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PG+ + K V G+ V L+ID GV ++ L Sbjct: 84 VDVPGH--EKFIKNMVAGLPGI-----------NLVLLVIDAGEGVMPQTREHIDILTLL 130 Query: 149 AV-SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V ++ IVLTK+D + + +E + + P H +++ T +V KGI L K I Sbjct: 131 GVRNFLIVLTKVDTVDEELLELAVEDIREQLAGTPLEHADIVKTDAVSGKGIPELLKKIE 190 Query: 208 E 208 E Sbjct: 191 E 191 >gi|293416385|ref|ZP_06659024.1| hypothetical protein ECDG_03140 [Escherichia coli B185] gi|291431741|gb|EFF04724.1| hypothetical protein ECDG_03140 [Escherichia coli B185] Length = 290 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMIIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKAEDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHP-VVAVSACT 202 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 203 GWELDTLVSALMTAL 217 >gi|289578133|ref|YP_003476760.1| GTP-binding protein Era [Thermoanaerobacter italicus Ab9] gi|289527846|gb|ADD02198.1| GTP-binding protein Era [Thermoanaerobacter italicus Ab9] Length = 302 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 23/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N ++ K +A TS P T++ + L + + VD Sbjct: 8 VALIGRTNVGKSTLLNAILQEK-IAITSPKPQTTRNTIRGI------LTTDEYQVIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI---DQDVFSFLDKK 148 PG PK + + + + TL+ V L++ +I D+ + L + Sbjct: 61 PG---IHKPKSKLSEFMIEVA-----KRTLKEVDLILYMIEPDTEIGPGDRYIIEHLKEV 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID + +ET+ K + Y A +V+ S+++ K I++L++ I+ Sbjct: 113 DTPVILVVNKIDLVPEERIEETI---KIFKKEY--AFKDVVAISAIENKNIDLLKEKIV 166 >gi|289550966|ref|YP_003471870.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus lugdunensis HKU09-01] gi|289180498|gb|ADC87743.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus lugdunensis HKU09-01] Length = 294 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 GL P+A I G NVGKS+LIN L RKN+A+T N PG T+ + Sbjct: 115 GLKPRAIRAMIV--GIPNVGKSTLINKLA-RKNIAQTGNKPGVTKQQQWI 161 >gi|284992350|ref|YP_003410904.1| translation initiation factor IF-2 [Geodermatophilus obscurus DSM 43160] gi|284065595|gb|ADB76533.1| translation initiation factor IF-2 [Geodermatophilus obscurus DSM 43160] Length = 998 Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 18/185 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A PP + G + GK+ L++ + N +AR A G TQH+ + + + L+++ Sbjct: 492 EARPPVVTVMGHVDHGKTKLLDAIRNTNVVAR--EAGGITQHIGAY--QIVTKLEDDERP 547 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + +D PG+ +S+ + R V L++ GV + + Sbjct: 548 ITFIDTPGH----------ESFTAMRAR---GAKVTDIVVLVVAADDGVMPQTVEALNHA 594 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKY-LIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 V + + KIDK A+ + T+Y L+ + S+ R+GI+ L Sbjct: 595 QAAEVPIVVAVNKIDKEGANPAKIRQQLTEYGLVAEEYGGDTMFVDVSATTRQGIDELLT 654 Query: 205 AILET 209 AIL T Sbjct: 655 AILLT 659 >gi|224025980|ref|ZP_03644346.1| hypothetical protein BACCOPRO_02731 [Bacteroides coprophilus DSM 18228] gi|224019216|gb|EEF77214.1| hypothetical protein BACCOPRO_02731 [Bacteroides coprophilus DSM 18228] Length = 437 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS+IN + + ++A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIINAFIGEERNIVTDIAGTTRDSIYTRYDKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D GV+ D ++FS Sbjct: 226 --YLVDTAGIRKKNKVSEDLEYYS--VIRSIRAIEGSDVCILMLDATRGVEGQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSVKRKGIEV 201 + + +V+ K D + +A+ ++ + IRN T P + ++ K++ +V Sbjct: 282 IQRNQKGLVVVVNKWDLVEDKSAK-VMKTFEEAIRNRLAPFTDFPIIFASALTKQRIFKV 340 Query: 202 LRKA 205 L A Sbjct: 341 LETA 344 >gi|147679252|ref|YP_001213467.1| tRNA modification GTPase TrmE [Pelotomaculum thermopropionicum SI] gi|189036204|sp|A5CY46|MNME_PELTS RecName: Full=tRNA modification GTPase mnmE gi|146275349|dbj|BAF61098.1| predicted GTPase [Pelotomaculum thermopropionicum SI] Length = 459 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 12/117 (10%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L+ R+N A ++ PG T+ + +++ N++ +P + ++D G Sbjct: 227 GRPNVGKSSLLNALL-RENRAIVTDIPGTTRD----IIEEYINIR-GIP-LKIIDTAGL- 278 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 R V+ G R E++ L V L++D G+ + D + + K V + Sbjct: 279 --RETGDAVERIGVEKAREAVEQADL--VLLVLDAARGLTEEDYAIIEKVGGKKVIF 331 >gi|27262166|gb|AAN87364.1| GTP-binding protein [Heliobacillus mobilis] Length = 445 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 16/147 (10%) Query: 21 IGLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 I LP G E IA G+ NVGKSS++N ++ + + SN PG T+ + Sbjct: 165 IEALPPEGDEEDDPDTIKIAVIGKPNVGKSSMVNAILGEERVI-VSNIPGTTRDA---ID 220 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F + L+D G ++V+ + ++R L V ++ID G Sbjct: 221 TPFEREGKHY---VLIDTAGMRRKGKIDESVERYS--VMRSLRAVDRSDVVLMVIDASQG 275 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKID 160 V + D+ + + + + +VL K D Sbjct: 276 VTEQDKKIAGYAHEAGKACVLVLNKWD 302 >gi|21242079|ref|NP_641661.1| GTP-binding protein Era [Xanthomonas axonopodis pv. citri str. 306] gi|294626962|ref|ZP_06705553.1| GTP-binding protein Era [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664536|ref|ZP_06729881.1| GTP-binding protein Era [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|25008431|sp|Q8PMU9|ERA_XANAC RecName: Full=GTPase Era gi|21107486|gb|AAM36197.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306] gi|292598822|gb|EFF42968.1| GTP-binding protein Era [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605698|gb|EFF49004.1| GTP-binding protein Era [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 299 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 +A GR NVGKS+L N LV K ++ SN P T+H + P + LV Sbjct: 13 VAVIGRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIA--------TFPEGQLVLV 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF--LDK 147 D PG R K+ ++ V + R +L V + + ++D +F L Sbjct: 64 DTPGL--HREQKRAMNR-----VMNRAARGSLEGVDAAVLVIEAGRWDEEDTLAFRVLSD 116 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V +V+ K+D+L TA R + HP S++KRKG++ L +L Sbjct: 117 AGVPVVLVVNKVDRLKDKTALFPFLAQVSEGRTFAAVHP----VSALKRKGLDALVGDLL 172 Query: 208 ETI 210 + + Sbjct: 173 KLV 175 >gi|283788475|ref|YP_003368340.1| GTP-binding protein [Citrobacter rodentium ICC168] gi|282951929|emb|CBG91650.1| putative GTP-binding protein [Citrobacter rodentium ICC168] Length = 303 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 50 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 102 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 103 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 156 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 157 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSART 215 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 216 GWELDTLVSALMTAL 230 >gi|167748931|ref|ZP_02421058.1| hypothetical protein ANACAC_03712 [Anaerostipes caccae DSM 14662] gi|167651553|gb|EDR95682.1| hypothetical protein ANACAC_03712 [Anaerostipes caccae DSM 14662] Length = 395 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 20/140 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR N GKSS++N L ++ LA S+ G T F K L L Sbjct: 7 PRGDRIHIALFGRRNAGKSSIVNALTGQE-LAIVSDVKGTTTDPVF---KAMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLR---CVYLLIDCRHGVKQIDQD 140 + ++D PG +D G L + + + + LR ++ D G+ + +Q Sbjct: 61 PVVMIDTPG----------LDDEGELGEKRVKKAKEVLRKTDIALVIADAETGITEFEQG 110 Query: 141 VFSFLDKKAVSYQIVLTKID 160 + + ++ + Y IV K D Sbjct: 111 ILDLIRERKLPYLIVYNKTD 130 >gi|295426288|ref|ZP_06818948.1| ribosome-associated GTPase EngA [Lactobacillus amylolyticus DSM 11664] gi|295064027|gb|EFG54975.1| ribosome-associated GTPase EngA [Lactobacillus amylolyticus DSM 11664] Length = 436 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 14/141 (9%) Query: 24 LPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNL 79 L K I+FS GR NVGKSS++N L+ K + +N G T+ F+ KD + Sbjct: 167 LDKKDKDTISFSVIGRPNVGKSSIVNKLLGEKRVI-VANQEGTTRDAIDTPFIGKDGTKF 225 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + L A + G Y + K +V +R LS L++D G+++ D+ Sbjct: 226 R--LIDTAGIRRRGKVYEKTEKYSV-------MRALSAIDRSDVALLVLDASTGIREQDK 276 Query: 140 DVFSFLDKKAVSYQIVLTKID 160 V + IV+ K D Sbjct: 277 HVAGYAHDAGRGLIIVVNKWD 297 >gi|241082068|ref|XP_002409005.1| GTP-binding protein mmr1, putative [Ixodes scapularis] gi|215492591|gb|EEC02232.1| GTP-binding protein mmr1, putative [Ixodes scapularis] Length = 580 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F G NVGKSSL+N L+ RK + S PG T+H Sbjct: 352 LGFVGHPNVGKSSLLNALMGRK-VVSVSRTPGHTKHFQ 388 >gi|220909026|ref|YP_002484337.1| tRNA modification GTPase TrmE [Cyanothece sp. PCC 7425] gi|254811474|sp|B8HSJ3|MNME_CYAP4 RecName: Full=tRNA modification GTPase mnmE gi|219865637|gb|ACL45976.1| tRNA modification GTPase TrmE [Cyanothece sp. PCC 7425] Length = 460 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 27/182 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKSSL+N +R + A + PG T+ + ++ V +P L Sbjct: 225 VAIVGRPNVGKSSLLNAW-SRSDRAIVTELPGTTRDVVESYLV-------VGGIPVQVL- 275 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R V+ G + R V L+ID + G DQ +++ + ++ Sbjct: 276 DTAGI---RETSDQVEQIG--VERSHKAAQAADLVLLVIDAQTGWTAEDQAIYTQVQER- 329 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S +V+ KID + + P + T++ + +GIE L AIL Sbjct: 330 -SLILVINKIDLVDQAFQPQAC---------LPDPALTYLCTAAAQNQGIEDLESAILSK 379 Query: 210 IN 211 + Sbjct: 380 VQ 381 >gi|226320990|ref|ZP_03796535.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 29805] gi|226233591|gb|EEH32327.1| ribosome-associated GTPase EngA [Borrelia burgdorferi 29805] Length = 433 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V ++G+ ++ G+ N GKS+LIN L + +A S+ PG T+ F+ F+ Sbjct: 163 VGKVGI-ESGADIKVGIIGKPNSGKSTLINYLSGNE-IAIVSDQPGTTRD---FIKTKFT 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD G + V+ + + R L + V+LLID + + Sbjct: 218 R---NGKVFEVVDTAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVQEKLTSQ 272 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ + ++ KK IV +K D Sbjct: 273 DKKIAHYVTKKGKGIVIVFSKWD 295 >gi|195998804|ref|XP_002109270.1| hypothetical protein TRIADDRAFT_21278 [Trichoplax adhaerens] gi|190587394|gb|EDV27436.1| hypothetical protein TRIADDRAFT_21278 [Trichoplax adhaerens] Length = 414 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G+ NVGKSS+IN L+ +K + TS +PG T+H P + L D Sbjct: 234 IGLIGQPNVGKSSVINGLIGKK-IVSTSRSPGHTKHFQTIYL---------CPTIRLCDS 283 Query: 92 PG 93 PG Sbjct: 284 PG 285 >gi|333005525|gb|EGK25043.1| hypothetical protein SFK218_1677 [Shigella flexneri K-218] Length = 290 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|167382549|ref|XP_001736158.1| mmr1/hsr1 GTP binding protein [Entamoeba dispar SAW760] gi|165901597|gb|EDR27675.1| mmr1/hsr1 GTP binding protein, putative [Entamoeba dispar SAW760] Length = 463 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 10/65 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G NVGKSSL+N LV +K + S+ PGRT++L + N + L D Sbjct: 309 VGLIGNPNVGKSSLLNWLVGKK-VTSVSSHPGRTKYLQTY---------NMNKRITLADC 358 Query: 92 PGYGY 96 PG + Sbjct: 359 PGMMF 363 >gi|47228562|emb|CAG05382.1| unnamed protein product [Tetraodon nigroviridis] Length = 376 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 37/177 (20%) Query: 32 IAFSGRSNVGKSSLINILV------NRKNL---ARTSNAPGRTQHLNFFVPKDFSNLKNN 82 + +G S +GKS+L+N L +RK L R S T+H + + LK Sbjct: 26 LMVAGESGLGKSTLVNSLFLTDLHKDRKLLNAEERISQTVEITKH-TVDIEEKGVKLK-- 82 Query: 83 LPAMALVDMPGYGYARAPKKNVDSW------------------GGLIVRYLSERSTLRCV 124 + +VD PG+G A N D W GL + + + C+ Sbjct: 83 ---LTIVDTPGFGDA---VNNSDCWRPVTDYIEQQFEQYFRDESGLNRKNIQDNRVHCCL 136 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 Y + HG++ +D + L K V+ ++ K D L+PT ++ E+ K I Y Sbjct: 137 YFIPPFGHGLRPVDVEFMRALQDK-VNVVPLIAKADCLTPTEMKKIKERVKEDIDKY 192 >gi|34581350|ref|ZP_00142830.1| conserved GTP-binding protein [Rickettsia sibirica 246] gi|28262735|gb|EAA26239.1| conserved GTP-binding protein [Rickettsia sibirica 246] Length = 447 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 29/189 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I SGR N GKS+ IN L+N + L T G T+ + D+ KNN + L+D Sbjct: 181 QIVVSGRPNAGKSTFINALINDERLL-TGPEAGITRE---SIEIDWQ-YKNN--HIKLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTL------RCVYLLIDCRHGVKQIDQDVFSF 144 G ++++ LS T+ V L+ID +KQ D ++ S+ Sbjct: 234 TAGLRKKSTITESLEK--------LSASDTINSIKFANTVILMIDALAPLKQQDLNIASY 285 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPT---SSVKRKGI 199 + + S IV+ K D + + + E+ Y I T P+V IP S++ ++ I Sbjct: 286 VVNEGRSIVIVVNKWDLVKESEKEAFQEEFYYQIN---THLPQVKGIPVLFISAINKQNI 342 Query: 200 EVLRKAILE 208 E + A L+ Sbjct: 343 EQVLDACLK 351 >gi|315658467|ref|ZP_07911339.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus lugdunensis M23590] gi|315496796|gb|EFU85119.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus lugdunensis M23590] Length = 295 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 GL P+A I G NVGKS+LIN L RKN+A+T N PG T+ + Sbjct: 116 GLKPRAIRAMIV--GIPNVGKSTLINKLA-RKNIAQTGNKPGVTKQQQWI 162 >gi|258622344|ref|ZP_05717369.1| GTP-binding protein [Vibrio mimicus VM573] gi|262170591|ref|ZP_06038269.1| GTP-binding protein Era [Vibrio mimicus MB-451] gi|258585360|gb|EEW10084.1| GTP-binding protein [Vibrio mimicus VM573] gi|261891667|gb|EEY37653.1| GTP-binding protein Era [Vibrio mimicus MB-451] Length = 324 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V D N A+ VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETD-----GNYQAI-YVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D++ LE +K + +++P S+ + K +VL+K + Sbjct: 140 PVVLCVNKVDQVKDRNEVMLHMLELSKRM------QFVDIVPISAKQGKNTDVLKKHV 191 >gi|20807296|ref|NP_622467.1| GTPase [Thermoanaerobacter tengcongensis MB4] gi|20515806|gb|AAM24071.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4] Length = 409 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 80/196 (40%), Gaps = 21/196 (10%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++G+ ++ P++ IA G+ N GKSSLIN + N+ +A S PG T + K Sbjct: 1 MKGLKKMNTTPRSERLHIAIFGKRNAGKSSLINAITNQP-IAIVSPTPGTTTDPVY---K 56 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 L L + LVD G +V G L V E + +L+ Sbjct: 57 SMEILP--LGPVVLVDTAGI-------DDVGELGKLRVEKTLEVLNRTDIAILVVSEIDD 107 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 ++ + +K V VL KID ++ EK YL T + +P S Sbjct: 108 LNFEKQLIKLFREKKVPSIGVLNKID-----LDKDYKEKLSYL---QSTLGIKFLPVSCA 159 Query: 195 KRKGIEVLRKAILETI 210 KGIE L+ I ++ Sbjct: 160 TLKGIEELKNEIARSV 175 >gi|121728973|ref|ZP_01681977.1| GTP-binding protein Era [Vibrio cholerae V52] gi|147674346|ref|YP_001217962.1| GTP-binding protein Era [Vibrio cholerae O395] gi|262167291|ref|ZP_06035001.1| GTP-binding protein Era [Vibrio cholerae RC27] gi|121628739|gb|EAX61206.1| GTP-binding protein Era [Vibrio cholerae V52] gi|146316229|gb|ABQ20768.1| GTP-binding protein Era [Vibrio cholerae O395] gi|227014352|gb|ACP10562.1| GTP-binding protein Era [Vibrio cholerae O395] gi|262024266|gb|EEY42957.1| GTP-binding protein Era [Vibrio cholerae RC27] Length = 324 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V D N A+ VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETD-----GNYQAI-YVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D++ LE +K + +++P S+ + K +VL+K + Sbjct: 140 PVVLCVNKVDQVKDRNEVMLHMLELSKRM------QFVDIVPISAKQGKNTDVLKKHV 191 >gi|303232074|ref|ZP_07318777.1| ribosome-associated GTPase EngA [Veillonella atypica ACS-049-V-Sch6] gi|302513180|gb|EFL55219.1| ribosome-associated GTPase EngA [Veillonella atypica ACS-049-V-Sch6] Length = 444 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN++ ++ + PG T+ +F D L ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKR-ISIVEDIPGVTRDRIYF---DAEWLNREF---TMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L E + + ++D + G+ D++V + L Sbjct: 57 DTGGIEFVTENSHVIPKMMRLQAELAIEEAD--VILFVVDGKQGIVPADEEVANILRTSG 114 Query: 150 VSYQIVLTKIDKLS 163 +V+ KID ++ Sbjct: 115 KPVVLVVNKIDSVN 128 >gi|297544408|ref|YP_003676710.1| GTP-binding protein Era [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842183|gb|ADH60699.1| GTP-binding protein Era [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 302 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 23/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N ++ K +A TS P T++ + L + + VD Sbjct: 8 VALIGRTNVGKSTLLNAILQEK-IAITSPKPQTTRNTIRGI------LTTDEYQVIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI---DQDVFSFLDKK 148 PG PK + + + + TL+ V L++ +I D+ + L + Sbjct: 61 PG---IHKPKSKLSEFMIEVA-----KRTLKEVDLILYMIEPDTEIGPGDRYIIEHLKEV 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID + +ET+ K + Y A +V+ S+++ K I++L++ I+ Sbjct: 113 DTPVILVVNKIDLVPEERIEETI---KIFKKEY--AFKDVVAISAIENKNIDLLKEKIV 166 >gi|283797196|ref|ZP_06346349.1| tRNA modification GTPase TrmE [Clostridium sp. M62/1] gi|291075154|gb|EFE12518.1| tRNA modification GTPase TrmE [Clostridium sp. M62/1] gi|295090272|emb|CBK76379.1| tRNA modification GTPase trmE [Clostridium cf. saccharolyticum K10] gi|295115469|emb|CBL36316.1| tRNA modification GTPase trmE [butyrate-producing bacterium SM4/1] Length = 458 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 26/174 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ N GKSSL+N+LV + T A L N++ + ++ ++D G Sbjct: 228 GKPNAGKSSLMNVLVGEERAIVTDVAGTTRDTLE-------ENIRLHGISLNIIDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R V+ G R +++ + L + ++D + + D+++ + +KA+ + Sbjct: 280 --RDTDDIVEKIGVDKARQIADDADL--IIYVVDGSRPLDENDREIMELIRGRKAI---V 332 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +L K D T +E E+T VIP S+ ++KGI+VL + I E Sbjct: 333 LLNKTDLEMLVTEKELEERTGQT----------VIPVSAKEQKGIDVLEERIRE 376 >gi|115911739|ref|XP_001180329.1| PREDICTED: similar to Mitochondrial translational initiation factor 2 [Strongylocentrotus purpuratus] gi|115973794|ref|XP_001181965.1| PREDICTED: similar to Mitochondrial translational initiation factor 2 [Strongylocentrotus purpuratus] Length = 739 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 29/189 (15%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 L K PP + G + GK++L++ L RK A G TQH+ F + L Sbjct: 192 LLKLRPPVVTIMGHVDHGKTTLLDTL--RKTSVAAGEAGGITQHIGAF--------QVQL 241 Query: 84 PA---MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 P+ + +D PG+ +A ++ ++V L++ GV + ++ Sbjct: 242 PSGQIITFLDTPGHAAFKAMRERGAEVTDIVV-------------LVVAADDGVMEQTRE 288 Query: 141 VFSFLDKKAVSYQIVLTKIDK--LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + K V + L K DK P ++ L + Y + + S++K + Sbjct: 289 SIKYARKAGVPIIVALNKCDKPGADPDFTRKDLLANDITVEEY-GGDIQCVEISALKGRN 347 Query: 199 IEVLRKAIL 207 +E L +A++ Sbjct: 348 LEALCEAVM 356 >gi|108563245|ref|YP_627561.1| GTP-binding protein EngA [Helicobacter pylori HPAG1] gi|122980493|sp|Q1CT35|DER_HELPH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|107837018|gb|ABF84887.1| GTP-binding protein-like protein [Helicobacter pylori HPAG1] Length = 461 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R+ ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RSKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P +E +E K R A VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPY--EEIMETLKRKFRFLEYA--PVITTSCLKARHIDEIKHKIIE 365 >gi|83646572|ref|YP_435007.1| GTPase [Hahella chejuensis KCTC 2396] gi|83634615|gb|ABC30582.1| predicted GTPase [Hahella chejuensis KCTC 2396] Length = 471 Score = 37.7 bits (86), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A G +N GK+SL+ L+ SN PG T+H+ + L N P + L Sbjct: 17 PISVAVVGHTNAGKTSLMRTLLRDLKFGVISNHPGATRHV-----EAGQILVNETPVITL 71 Query: 89 VDMPG 93 D PG Sbjct: 72 FDTPG 76 >gi|78046933|ref|YP_363108.1| GTP-binding protein Era [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123585559|sp|Q3BVV5|ERA_XANC5 RecName: Full=GTPase Era gi|78035363|emb|CAJ23008.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 300 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 24/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 +A GR NVGKS+L N LV K ++ SN P T+H + P + LV Sbjct: 13 VAVIGRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIA--------TFPEGQLVLV 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF--LDK 147 D PG R K+ ++ V + R +L V + + ++D +F L Sbjct: 64 DTPGL--HREQKRAMNR-----VMNRAARGSLEGVDAAVLVIEAGRWDEEDTLAFRVLSD 116 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V +V+ K+D+L TA R + HP S++KRKG++ L +L Sbjct: 117 AGVPVVLVVNKVDRLKDKTALFPFLAQVSEGRTFAAVHP----VSALKRKGLDALVGDLL 172 Query: 208 ETI 210 + + Sbjct: 173 KLV 175 >gi|221194359|ref|ZP_03567416.1| ribosome-associated GTPase EngA [Atopobium rimae ATCC 49626] gi|221185263|gb|EEE17653.1| ribosome-associated GTPase EngA [Atopobium rimae ATCC 49626] Length = 440 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 25/153 (16%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +PK P +A GR NVGKS+L+N L R+ A + G T+ + + + N Sbjct: 1 MPK---PIVAVVGRPNVGKSTLVNRLAQRRE-AIVHESRGVTRD------RSYHDADWNG 50 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQID 138 L+D G ++ + ++ E++ L C + ++D + G+ D Sbjct: 51 REFCLIDTGGIESVKSKDQ--------FAPHIREQALLACEEADVIVFVVDGKTGITDED 102 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL 171 ++V + + +V+ K D SP T Q+ L Sbjct: 103 EEVARIVRRSDKPVFLVVNKKD--SPETEQDGL 133 >gi|220912306|ref|YP_002487615.1| GTP-binding protein EngA [Arthrobacter chlorophenolicus A6] gi|219859184|gb|ACL39526.1| small GTP-binding protein [Arthrobacter chlorophenolicus A6] Length = 516 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 23/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L+N ++ R+ A + PG T+ + N +N LV Sbjct: 79 PVLAIIGRPNVGKSTLVNRILGRRE-AVVEDTPGVTRDRVMYSAS--WNGRN----FTLV 131 Query: 90 DMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G+ + AR V + V V ++D G D+ V L + Sbjct: 132 DTGGWEHDARGIHARVAEQAEMAVELAD------AVLFVVDSAVGATATDEGVMKMLRRS 185 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D + L + E P S++ +G+ L +++ Sbjct: 186 KKPVIMVANKVDDFAQEADSAAL---------WGLGFGEPYPVSALHGRGVADLLDHVMD 236 Query: 209 TI 210 + Sbjct: 237 VL 238 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 20/179 (11%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD-FSNLK 80 G+ GP IA GR NVGKSSL+N L + + N G T+ P D F L Sbjct: 246 GVERSGGPRRIALIGRPNVGKSSLLNKLAGTERVV-VDNTAGTTRD-----PVDEFIELG 299 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + VD G + + D + L + E++ + V L +D + + D Sbjct: 300 DR--TWRFVDTAGIRRRQHMAQGADYYASLRTQAALEKAEVAVVLLAVD--EVLSEQDVR 355 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRK 197 + + + + K D L E+ +YL R AH E P ++ K Sbjct: 356 ILQLAIESGRALVLAFNKWDLLDD-------ERRRYLEREIEQDLAHVEWAPRVNISAK 407 >gi|187777372|ref|ZP_02993845.1| hypothetical protein CLOSPO_00928 [Clostridium sporogenes ATCC 15579] gi|187774300|gb|EDU38102.1| hypothetical protein CLOSPO_00928 [Clostridium sporogenes ATCC 15579] Length = 461 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 22/171 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+N +N A + PG T+ V +++ N+ + +P + +VD G Sbjct: 230 GKPNVGKSSLLNALIN-ENKAIVTEIPGTTRD----VIEEYINI-DGIP-IKIVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + + + + V ++D + + D ++ +F+ K Y ++ Sbjct: 282 --RETEDVVEKIG--VEKSKEKIAEADLVIFMLDLSRKIDEEDIEIMNFIKNK--KYIVL 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L K D + L + + I+ + + +I TS G+ L++ I Sbjct: 336 LNKSD------LNKDLNEENHFIKGLDSKY--IIRTSVKNNSGLNELKECI 378 >gi|17545938|ref|NP_519340.1| GTP-binding protein EngA [Ralstonia solanacearum GMI1000] gi|26006721|sp|Q8Y026|DER_RALSO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|17428233|emb|CAD14921.1| putative gtp-binding protein [Ralstonia solanacearum GMI1000] Length = 447 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 11/175 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + DF +N P L+D Sbjct: 183 IAIVGRPNVGKSTLVNALIGEERVI-AFDMPGTTRDAIYV---DFE--RNGKP-YTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D + + D + F+ + + Sbjct: 236 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + K D L + ++ A+ I S+ +R GI L K++ Sbjct: 294 LVIGVNKWDGLDGHARDRIKHDMERKLQFLSFANVHYI--SAKQRTGIGALMKSV 346 >gi|331675665|ref|ZP_08376410.1| conserved hypothetical protein [Escherichia coli TA280] gi|331067159|gb|EGI38569.1| conserved hypothetical protein [Escherichia coli TA280] Length = 276 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 23 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 76 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 129 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 130 HQQVLFVVTQADKTEPCHEWDVAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 186 Query: 196 RKGIEV 201 R G E+ Sbjct: 187 RTGWEL 192 >gi|299067270|emb|CBJ38467.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia solanacearum CMR15] Length = 447 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 11/175 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + DF +N P L+D Sbjct: 183 IAIVGRPNVGKSTLVNALIGEERVI-AFDMPGTTRDAIYV---DFE--RNGKP-YTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D + + D + F+ + + Sbjct: 236 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + K D L + ++ A+ I S+ +R GI L K++ Sbjct: 294 LVIGVNKWDGLDGHARDRIKHDMERKLQFLSFANVHYI--SAKQRTGIGALMKSV 346 >gi|254480079|ref|ZP_05093327.1| putative GTPase [marine gamma proteobacterium HTCC2148] gi|214039641|gb|EEB80300.1| putative GTPase [marine gamma proteobacterium HTCC2148] Length = 417 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 9/133 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ + + PG T+ + + + + L+D Sbjct: 128 VAVVGRPNVGKSTLVNRLLGEDRVV-VFDEPGTTRDSIYI------DYQRDEQEYTLIDT 180 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + K+ V+ + IV+ L V L++D G+ D + +K Sbjct: 181 AGVRRRKNVKQTVEKFS--IVKTLKAIDDAHVVILVMDAHEGIVDQDMHLLGHCIEKGRG 238 Query: 152 YQIVLTKIDKLSP 164 + + K D + P Sbjct: 239 LVLAVNKWDGIEP 251 >gi|328352372|emb|CCA38771.1| Uncharacterized protein yqeH [Pichia pastoris CBS 7435] Length = 527 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 15/88 (17%) Query: 34 FSGRSNVGKSSLINILVNRK-NLARTSNAPGRTQHLNFFVPKDFS-NLKNNLPAMALVDM 91 F G +N GKS+LI +V + + +T N PG HL F K + NN ++ LVD+ Sbjct: 216 FLGMTNTGKSTLIRSIVGKDYSKKQTENGPG-VSHLPSFTRKPMKFKMDNN--SLELVDL 272 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS 119 PGY AP G + +YL E + Sbjct: 273 PGY---TAP-------NGGVYKYLKEEN 290 >gi|288924558|ref|ZP_06418495.1| ribosome-associated GTPase EngA [Prevotella buccae D17] gi|315607420|ref|ZP_07882416.1| ribosome-associated GTPase EngA [Prevotella buccae ATCC 33574] gi|288338345|gb|EFC76694.1| ribosome-associated GTPase EngA [Prevotella buccae D17] gi|315250852|gb|EFU30845.1| ribosome-associated GTPase EngA [Prevotella buccae ATCC 33574] Length = 437 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 22/177 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR NVGKSS+IN + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L+ID G++ D ++F Sbjct: 226 --YLVDTAGIRRKNKVSEDLEFYS--VMRSIRAIENSDVCILMIDATRGIETQDMNIFQL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGI 199 + K S +V+ K D + T Q+ ++ + IR P +I +S+V ++ I Sbjct: 282 IQKNNKSLVVVVNKWDLVEDKT-QKVIDTFENAIRARMAPFVDFPIIFSSAVTKQRI 337 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 17/135 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTQSRR-AIVSDTAGTTRD------RQYGKCQWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL---SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G+ K+ D + I R + +E + L V L+D GV D+DV L + Sbjct: 58 GGWVV-----KSDDIFEDAIRRQVLVATEEADL--VLFLVDVSTGVTDWDEDVAMILRRT 110 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D S Sbjct: 111 KLPVILVANKVDNSS 125 >gi|262166501|ref|ZP_06034238.1| GTP-binding protein Era [Vibrio mimicus VM223] gi|262026217|gb|EEY44885.1| GTP-binding protein Era [Vibrio mimicus VM223] Length = 324 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 22/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V D N A+ VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETD-----GNYQAI-YVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D++ LE +K + +++P S+ + K +VL+K + Sbjct: 140 PVVLCVNKVDQVKDRNEVMLHMLELSKRM------QFVDIVPISAKQGKNTDVLKKHV 191 >gi|320169481|gb|EFW46380.1| HSR1 protein [Capsaspora owczarzaki ATCC 30864] Length = 661 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVPK 74 I F G NVGKSSLIN ++ +K + S PG T+H F P+ Sbjct: 427 IGFVGYPNVGKSSLINAIMGKK-VVSASRTPGHTKHFQTIFLTPQ 470 >gi|319936463|ref|ZP_08010879.1| GTP-binding protein engA [Coprobacillus sp. 29_1] gi|319808578|gb|EFW05130.1| GTP-binding protein engA [Coprobacillus sp. 29_1] Length = 435 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 29/195 (14%) Query: 21 IGLLPKAG----PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVP 73 I L+P++ EI FS GR NVGKSSL N L+ + + S+ G T+ ++ Sbjct: 160 IHLMPESEDHREEDEIRFSIIGRPNVGKSSLTNALLGEERVI-VSDIEGTTRDAIDTAFE 218 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 KD + ++D G +N++ + I+R LS V ++ID G Sbjct: 219 KDGQKYR-------VIDTAGMRKKGKVYENIEKYS--ILRALSAVEKSDVVLVVIDGERG 269 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKID------KLSPTTAQETLEKTKYLIRNYPTAHPE 187 V + D+ V + +V+ K D K +E E+ KYL + Sbjct: 270 VVEQDKHVAGNAHEAGRGVILVVNKWDLVQKDGKTMQKMEKELREQFKYL------DYAP 323 Query: 188 VIPTSSVKRKGIEVL 202 ++ TS+ ++K I++L Sbjct: 324 IVFTSAKEKKRIDLL 338 >gi|242033031|ref|XP_002463910.1| hypothetical protein SORBIDRAFT_01g008777 [Sorghum bicolor] gi|241917764|gb|EER90908.1| hypothetical protein SORBIDRAFT_01g008777 [Sorghum bicolor] Length = 137 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 10/69 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K T + PG+T+H + + + L D Sbjct: 7 VGFVGYPNVGKSSSINALVGEKRTGVT-HTPGKTKHFQTLIISE---------ELTLCDC 56 Query: 92 PGYGYARAP 100 PG + P Sbjct: 57 PGLVFPSFP 65 >gi|110639446|ref|YP_679655.1| GTP-binding protein EngA [Cytophaga hutchinsonii ATCC 33406] gi|123354325|sp|Q11QK1|DER_CYTH3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|110282127|gb|ABG60313.1| GTP-binding protein [Cytophaga hutchinsonii ATCC 33406] Length = 435 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 23/180 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA----PGRTQHLNFFVPKDFSNLK 80 P G P IA GR N GKSS +N L+ T A T H N F K+F Sbjct: 171 PNKGIPRIAVLGRPNAGKSSYVNALLGTNRSIVTDQAGTTRDSITSHYNVF-GKEF---- 225 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 VD G K++V+ + L V+ L E CV ++ID G++ D Sbjct: 226 ------IFVDTAGIRKKSRIKEDVEYYSILRSVKALEESDV--CV-IMIDAERGIESQDM 276 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 ++ I++ K D + TAQ E + ++ P +P ++ S + ++ Sbjct: 277 NIIWMAHNNKKGIVILVNKWDLIEKDSKTAQVFQENIREALK--PIDYPLIMFISVLNKQ 334 >gi|225389099|ref|ZP_03758823.1| hypothetical protein CLOSTASPAR_02845 [Clostridium asparagiforme DSM 15981] gi|225044833|gb|EEG55079.1| hypothetical protein CLOSTASPAR_02845 [Clostridium asparagiforme DSM 15981] Length = 441 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 29/175 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L + ++ + PG T+ + D S L N L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAG-ETISIVKDTPGVTRDRIY---ADCSWLNMNF---TLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-----STLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P + +I+ + E+ +T + ++D R G+ D V Sbjct: 57 DTGGI----EPDTS-----DVILSQMREQAEIAIATADVIVFIVDVRQGLVDADTKVADM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L K + + K+D + E Y N P +P S+ R GI Sbjct: 108 LRKSRKPVVLAVNKVD------SYEKFGNDVYEFYNLGIGDP--VPVSAASRLGI 154 Score = 35.0 bits (79), Expect = 6.9, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 11/169 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L+ +N S+ G T+ D + + P + + Sbjct: 178 PRIAVVGKPNVGKSSIINKLLG-ENRVIVSDIAGTTRD-----AVDTEIVHDGTPYV-FI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + ++ + I+R ++ V ++ID + GV + D + ++ Sbjct: 231 DTAGLRRKSKIHEELERYS--IIRTVTAVERADIVVVVIDAKEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + + K D + T E K K ++ P A + ++ +R Sbjct: 289 KGIIVAVNKWDAIEKNDKTIYEYTNKLKEILSFIPYAEYLFVSAATGQR 337 >gi|260822143|ref|XP_002606462.1| hypothetical protein BRAFLDRAFT_226235 [Branchiostoma floridae] gi|229291804|gb|EEN62472.1| hypothetical protein BRAFLDRAFT_226235 [Branchiostoma floridae] Length = 310 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 21/148 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL----VDM 91 G S +GKS+LIN L +L PG + + V D S ++ + L VD Sbjct: 42 GESGLGKSTLINSLF-LTDLYPEREIPGAAEKIEQTVKIDASTVEIEERGVKLRLTVVDT 100 Query: 92 PGYGYARAPK---KNVDSW-GGLIVRYLSERSTLR-----------CVYLLIDCRHGVKQ 136 PGYG A K K + S+ RY + S L C Y + HG+K Sbjct: 101 PGYGDAINSKDCFKPILSYIDDQFERYFHDESGLNRRNIVDNRVHCCFYFISPYGHGLKP 160 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 +D + L K V+ V+ K D L+P Sbjct: 161 LDVEFMKALHHK-VNIVPVIAKADTLTP 187 >gi|326563541|gb|EGE13800.1| HSR1-related GTP-binding protein [Moraxella catarrhalis 12P80B1] gi|326570147|gb|EGE20192.1| HSR1-related GTP-binding protein [Moraxella catarrhalis BC8] gi|326570886|gb|EGE20910.1| HSR1-related GTP-binding protein [Moraxella catarrhalis BC7] Length = 464 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ G +NVGK+SL+ L+ + NA T+H+ V D + K+N+P + L D Sbjct: 11 ISIIGHTNVGKTSLLRTLLRDSDFGEVKNASATTRHV---VAVDILS-KDNVPLITLHDT 66 Query: 92 PG 93 PG Sbjct: 67 PG 68 >gi|228475017|ref|ZP_04059745.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus hominis SK119] gi|228271002|gb|EEK12390.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus hominis SK119] Length = 294 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 14/73 (19%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLK 80 GL P+A I G NVGKS+LIN L +KN+A+T N PG T+ + V K Sbjct: 115 GLKPRAIRAMIV--GIPNVGKSTLINKLA-KKNIAQTGNKPGVTKQQQWIKVGK------ 165 Query: 81 NNLPAMALVDMPG 93 A+ L+D PG Sbjct: 166 ----ALQLLDTPG 174 >gi|227357012|ref|ZP_03841383.1| ATP/GTP-binding protein [Proteus mirabilis ATCC 29906] gi|227162815|gb|EEI47775.1| ATP/GTP-binding protein [Proteus mirabilis ATCC 29906] Length = 290 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 33/199 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G++ GKSSLIN L + +L+ S+ G T+ + FS NN + V Sbjct: 34 PTIGLMGKTGAGKSSLINALF-QSSLSPVSDVSGCTRQ-----AQRFSMTMNN-HTLTFV 86 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PG G + K + L L E L + ++ D+ + FL ++ Sbjct: 87 DLPGVGESLERDK---EYHQLYRNLLPE---LDLIIWVLKADDRAWSSDEQCYRFLTEQC 140 Query: 150 VSYQ-----IVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 YQ VL + DK+ SP + + K + +I + HP V+ Sbjct: 141 -GYQSERFLFVLNQADKIEPCRQWNELSHQPSPEQSANLVSKQQTVITAFKPHHP-VMVV 198 Query: 192 SSVKRKGIEVLRKAILETI 210 S+++ + L + +++ + Sbjct: 199 SAIENYQLTELAEQLIQVL 217 >gi|212634303|ref|YP_002310828.1| GTP-binding protein EngA [Shewanella piezotolerans WP3] gi|226741196|sp|B8CKR5|DER_SHEPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|212555787|gb|ACJ28241.1| GTP-binding protein EngA [Shewanella piezotolerans WP3] Length = 490 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 13/147 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ L Sbjct: 199 PIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRD-SIYIP-----MEREGREYVL 251 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L+ID R G+ + D + F Sbjct: 252 IDTAGVRRRSKVHETVEKFS--VIKTLKAVEDCNVVLLIIDAREGIAEQDLGLLGFALNA 309 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTK 175 + I + K D + QE ++ K Sbjct: 310 GRALVIAVNKWDGID----QEVKDRVK 332 >gi|156086578|ref|XP_001610698.1| GTPase [Babesia bovis T2Bo] gi|154797951|gb|EDO07130.1| GTPase, putative [Babesia bovis] Length = 622 Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 16/191 (8%) Query: 32 IAFSGRSNVGKSSLINIL------VNRKNLARTSNAPGRTQHLNF---FVPKDFSNLKNN 82 + GRSNVGKSSL N L V + + S+ PG T+ + F+ L + Sbjct: 3 VTLLGRSNVGKSSLFNALAGSNVSVPKFMKSVVSSNPGTTRDAKYGQIFIKGKRITLVDT 62 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + V PG G + + ++ L V ++D + G+ +D + Sbjct: 63 GGIESAVMPPGLGSSSCSNRF-----SILEHALKTAGRSDLVLFVVDGQEGITPLDMTIA 117 Query: 143 SFLDKKAVSYQIVLT-KIDKLSPTTAQETLEKTKYLIRN-YPTAHPEVIPTSSVKRKGIE 200 S L + S VL ++KL ++E E I + Y + I S+ R G + Sbjct: 118 SNLKDQCSSTSSVLKLVVNKLDSEGSEEYYEAVSKCISDCYSLGLGDPIFVSTHDRHGAQ 177 Query: 201 VLRKAILETIN 211 LR I +++N Sbjct: 178 RLRSIISKSLN 188 >gi|262038068|ref|ZP_06011473.1| GTP-binding protein Era [Leptotrichia goodfellowii F0264] gi|261747888|gb|EEY35322.1| GTP-binding protein Era [Leptotrichia goodfellowii F0264] Length = 304 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 22/137 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N LV K +A S+ G T+ K N+ N VD Sbjct: 13 IAIVGRPNVGKSTLMNKLVKEK-VAIVSDKAGTTRDQ----IKGIVNIGEN--QYIFVDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQ-DVF--SFLD 146 PG PK L+ +++E + TL V L++ G K+I D+F + Sbjct: 66 PG---IHKPKH-------LLGEHMTEIALETLSNVDLIMFMLDGTKEISTGDIFVNEHIR 115 Query: 147 KKAVSYQIVLTKIDKLS 163 + +V+ KIDK+S Sbjct: 116 ETKTPVIVVINKIDKMS 132 >gi|210623874|ref|ZP_03294109.1| hypothetical protein CLOHIR_02060 [Clostridium hiranonis DSM 13275] gi|210153300|gb|EEA84306.1| hypothetical protein CLOHIR_02060 [Clostridium hiranonis DSM 13275] Length = 299 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N +V K +A S+ P T++ V D + + +D Sbjct: 7 VSIVGRPNVGKSTLMNNVVGEK-IAIMSDKPQTTRNTIQAVYTD------DESQVVFLDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G ++V+ ++ S + + ++D + D+ + L Sbjct: 60 PGI---HKPK---NKLGEIMVKAATDAFSNVDLILFVVDSSRKIGPGDRRIMEDLRGSKT 113 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVLRKAILE 208 +V+ KID++ E ++ +I+ Y E++P S++K K ++ L I E Sbjct: 114 PIVLVINKIDQI------EDKDELFDIIKMYDDEKMFKEIVPISALKGKNVKTLINVIKE 167 Query: 209 TI 210 + Sbjct: 168 DL 169 >gi|160947545|ref|ZP_02094712.1| hypothetical protein PEPMIC_01480 [Parvimonas micra ATCC 33270] gi|158446679|gb|EDP23674.1| hypothetical protein PEPMIC_01480 [Parvimonas micra ATCC 33270] Length = 298 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 26/149 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK---NNLPA-MA 87 + GRSNVGKS+L+N ++ K ++ S+ P T+ +NLK N+L + + Sbjct: 9 VTIVGRSNVGKSTLLNRIIGEK-ISIISSKPQTTR----------ANLKLIYNSLDSQIV 57 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSF 144 +D PG + PK + G +++ RS+LR V L ++D + ++D + Sbjct: 58 FLDTPG---IQNPK---NKLGEFMLK--ESRSSLRDVDLILYMVDVNFEIGELDNLIIDI 109 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 L K + V+ KID L+ + + K Sbjct: 110 LRKINLPKICVINKIDTLNSEELSKLVSK 138 >gi|153953550|ref|YP_001394315.1| GTP-binding protein Era [Clostridium kluyveri DSM 555] gi|219854172|ref|YP_002471294.1| hypothetical protein CKR_0829 [Clostridium kluyveri NBRC 12016] gi|189037262|sp|A5N6N6|ERA_CLOK5 RecName: Full=GTPase Era gi|254783294|sp|B9E055|ERA_CLOK1 RecName: Full=GTPase Era gi|146346431|gb|EDK32967.1| Predicted GTP-binding protein [Clostridium kluyveri DSM 555] gi|219567896|dbj|BAH05880.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 293 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 29/177 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 I GR NVGKS+L+N ++ K L+ S P T++ DF + V Sbjct: 7 ITIIGRPNVGKSTLLNSIMGEK-LSIVSCKPQTTRNSIQTILTRDDFQ--------LIFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D PG PK + G +V+ ++E S + + LI V + D+ + L K Sbjct: 58 DTPG---IHKPKHKL---GNYMVK-VAESSVKDVDLILFLITPDVEVGKGDRYILEQLKK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVL 202 + + +V+ KID+ QE + +T ++NY E+IP S++K+K ++ L Sbjct: 111 ENIPVFLVVNKIDE----NPQEKVAQT---LKNYSEIFDFAEIIPISALKQKNVKEL 160 >gi|83647146|ref|YP_435581.1| GTP-binding protein EngA [Hahella chejuensis KCTC 2396] gi|123531965|sp|Q2SDW8|DER_HAHCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|83635189|gb|ABC31156.1| predicted GTPase [Hahella chejuensis KCTC 2396] Length = 472 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 9/138 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L+N L+ + + PG T+ + ++P + L L+D Sbjct: 178 IGIIGRPNVGKSTLVNRLLGEDRVV-VFDQPGTTRD-SVYIP--YERLGERY---TLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + V+ + IV+ L V L++D R G+ D + F + + Sbjct: 231 AGVRRRKNVSEAVEKFS--IVKTLQAIKDAHVVVLVLDAREGIVDQDLHLLGFAIEAGRA 288 Query: 152 YQIVLTKIDKLSPTTAQE 169 + + K D +S E Sbjct: 289 LVLAINKWDGMSQDDKDE 306 >gi|329565815|gb|AEB92244.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] Length = 404 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 14/128 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 191 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 243 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 244 GI---RDTDELVEKIG--VAKSKEVLAEADLILFVLDASRELTKEDYEIFDILVGKNIVF 298 Query: 153 QIVLTKID 160 VL KID Sbjct: 299 --VLNKID 304 >gi|326576384|gb|EGE26293.1| HSR1-related GTP-binding protein [Moraxella catarrhalis O35E] Length = 464 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ G +NVGK+SL+ L+ + NA T+H+ V D + K+N+P + L D Sbjct: 11 ISIIGHTNVGKTSLLRTLLRDSDFGEVKNASATTRHV---VAVDILS-KDNVPLITLHDT 66 Query: 92 PG 93 PG Sbjct: 67 PG 68 >gi|314936594|ref|ZP_07843941.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus hominis subsp. hominis C80] gi|313655213|gb|EFS18958.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus hominis subsp. hominis C80] Length = 294 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 14/73 (19%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLK 80 GL P+A I G NVGKS+LIN L +KN+A+T N PG T+ + V K Sbjct: 115 GLKPRAIRAMIV--GIPNVGKSTLINKLA-KKNIAQTGNKPGVTKQQQWIKVGK------ 165 Query: 81 NNLPAMALVDMPG 93 A+ L+D PG Sbjct: 166 ----ALQLLDTPG 174 >gi|296113363|ref|YP_003627301.1| HSR1-related GTP-binding protein [Moraxella catarrhalis RH4] gi|295921057|gb|ADG61408.1| HSR1-related GTP-binding protein [Moraxella catarrhalis RH4] Length = 464 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ G +NVGK+SL+ L+ + NA T+H+ V D + K+N+P + L D Sbjct: 11 ISIIGHTNVGKTSLLRTLLRDSDFGEVKNASATTRHV---VAVDILS-KDNVPLITLHDT 66 Query: 92 PG 93 PG Sbjct: 67 PG 68 >gi|321313663|ref|YP_004205950.1| tRNA modification GTPase TrmE [Bacillus subtilis BSn5] gi|291486741|dbj|BAI87816.1| tRNA modification GTPase TrmE [Bacillus subtilis subsp. natto BEST195] gi|320019937|gb|ADV94923.1| tRNA modification GTPase TrmE [Bacillus subtilis BSn5] Length = 459 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 228 GRPNVGKSSLLNSLVHEAK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L +L+ + + ++DV F + + ++ Sbjct: 280 --RETEDIVERIGVERSRQVLKEADL----ILLVLNYSEELSEEDVKLFEAVEGMDVIVI 333 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L K D A+ E+ + L P V+ TS +K +GI L +AI Sbjct: 334 LNKTD----LEAKIDTERVRELANGRP-----VVTTSLLKEEGINDLEEAI 375 >gi|255659827|ref|ZP_05405236.1| tRNA modification GTPase TrmE [Mitsuokella multacida DSM 20544] gi|260847902|gb|EEX67909.1| tRNA modification GTPase TrmE [Mitsuokella multacida DSM 20544] Length = 461 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 22/174 (12%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ R+ A ++ PG T+ ++++++ +P + ++D Sbjct: 226 AIIGKPNVGKSSLLNSLL-REERAIVTDVPGTTRD----SIEEYADV-GGIP-LRIIDTA 278 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G RA V+ G R + + L + L D + D+++ + + Sbjct: 279 GI---RATDDVVERIGVEKARSYVKEAAL--ILALFDASRPLDSEDEEILKLVRGRDA-- 331 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I+L D L P E L+ +++ + P VI S+ + G+E L KAI Sbjct: 332 -ILLLNKDDLQPVVTAEMLQ--RHVKKEVP-----VITISTRTQDGLENLAKAI 377 >gi|218262398|ref|ZP_03476878.1| hypothetical protein PRABACTJOHN_02553 [Parabacteroides johnsonii DSM 18315] gi|218223401|gb|EEC96051.1| hypothetical protein PRABACTJOHN_02553 [Parabacteroides johnsonii DSM 18315] Length = 437 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 31/188 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQH----LNFFVPKDFSNLK 80 P IA GR N GKSSLIN + ++A T+ T++ LNF+ Sbjct: 176 PRIAIIGRPNAGKSSLINAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFY--------- 226 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVD G + K N D ++R + L++D G++ D + Sbjct: 227 -------LVDTA--GIRKKGKVNEDLEYYSVIRSIRAIENSDVCVLMLDATRGIESQDLN 277 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSVKRK 197 +FS + K + + K D L +Q+ ++ IR T P + ++ K++ Sbjct: 278 IFSLVQKNKKGLVVCVNKWD-LVEDKSQKVIDTFMNAIRERLAPFTDFPILFISALTKQR 336 Query: 198 GIEVLRKA 205 ++VL A Sbjct: 337 ILKVLETA 344 >gi|146283357|ref|YP_001173510.1| GTP-binding protein EngA [Pseudomonas stutzeri A1501] gi|166225844|sp|A4VNW7|DER_PSEU5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145571562|gb|ABP80668.1| GTP-binding protein EngA [Pseudomonas stutzeri A1501] gi|327481749|gb|AEA85059.1| GTP-binding protein EngA [Pseudomonas stutzeri DSM 4166] Length = 499 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 14/141 (9%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E IA GR NVGKS+L+N ++ + + A T + ++P + K Sbjct: 197 GPSEKEGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQAG--TTRDSIYIPFERDEEKYT 254 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L A V G + K +V V+ L V ++D R GV + D ++ Sbjct: 255 LIDTAGVRRRGKIFEAVEKFSV-------VKTLQAIQDANVVIFVMDAREGVVEHDLNLL 307 Query: 143 SFLDKKAVSYQIVLTKIDKLS 163 F+ + + I L K D + Sbjct: 308 GFVLETGRALVIALNKWDGME 328 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 21/170 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A + G T+ + + K ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKSRD-AIVAEYAGLTR------DRQYGEAKWQGRTYIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ +D+ + + L V ++D R G+ DQ + L K+ Sbjct: 56 DTGGIS---GDEEGIDA--KMAEQSLQAIEEADAVLFMVDSRAGLTAADQMIGEHLRKRN 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V K+D + P A+ P + +P ++ +GI Sbjct: 111 KRCFLVANKVDSVDPDIARAEFS---------PLGLGDALPIAAAHGRGI 151 >gi|194432361|ref|ZP_03064648.1| putative GTPase [Shigella dysenteriae 1012] gi|297521934|ref|ZP_06940320.1| hypothetical protein EcolOP_30123 [Escherichia coli OP50] gi|15808742|gb|AAL08471.1| unknown [Shigella flexneri 2a] gi|194419248|gb|EDX35330.1| putative GTPase [Shigella dysenteriae 1012] gi|333009623|gb|EGK29075.1| hypothetical protein SFK272_1251 [Shigella flexneri K-272] gi|333020579|gb|EGK39839.1| hypothetical protein SFK227_0562 [Shigella flexneri K-227] Length = 290 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|240146998|ref|ZP_04745599.1| ribosome-associated GTPase EngA [Roseburia intestinalis L1-82] gi|257200843|gb|EEU99127.1| ribosome-associated GTPase EngA [Roseburia intestinalis L1-82] gi|291535193|emb|CBL08305.1| ribosome-associated GTPase EngA [Roseburia intestinalis M50/1] gi|291539724|emb|CBL12835.1| ribosome-associated GTPase EngA [Roseburia intestinalis XB6B4] Length = 441 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 11/169 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A G+ NVGKSSLIN L + + A ++ ++++ N + Sbjct: 178 PKVAIIGKPNVGKSSLINKLAQEDRVIVSDIAGTTRDAID-------TDIRYNGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ ++ID GV + D + ++ Sbjct: 231 DTAGLRRKNKIKEEIERYS--IIRAVTAVERADVCIIVIDATEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 I + K D + T EK + ++ P A I S +R Sbjct: 289 KGIIIAVNKWDAIEKDDKTIYRHTEKIRQILSFMPYAEILFISAKSGQR 337 >gi|254521460|ref|ZP_05133515.1| GTP-binding protein [Stenotrophomonas sp. SKA14] gi|219719051|gb|EED37576.1| GTP-binding protein [Stenotrophomonas sp. SKA14] Length = 465 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 19/153 (12%) Query: 21 IGLLPKAGPPE----------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 I LP+ G E IAF GR NVGKS+L+N ++ + + S+ PG T+ + Sbjct: 160 IQRLPEEGSGEELDNDPNRIRIAFVGRPNVGKSTLVNRILGEERMI-ASDVPGTTRD-SI 217 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 V +L+ + L+D G + V+ + +V+ + + L++D Sbjct: 218 AV-----DLERDGREYRLIDTAGLRRRSRVDEVVEKFS--VVKTMQSIEQCQVAVLMLDA 270 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 GV D V + + I + K D L+ Sbjct: 271 TEGVTDQDATVLGAVLDAGRALVIAINKWDGLT 303 >gi|329565795|gb|AEB92234.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] Length = 404 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 14/128 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 191 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 243 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 244 GI---RDTDELVEKIG--VAKSKEVLAEADLILFVLDASRELTKEDYEIFDILVGKNIVF 298 Query: 153 QIVLTKID 160 VL KID Sbjct: 299 --VLNKID 304 >gi|326559848|gb|EGE10248.1| HSR1-related GTP-binding protein [Moraxella catarrhalis 7169] Length = 466 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ G +NVGK+SL+ L+ + NA T+H+ V D + K+N+P + L D Sbjct: 13 ISIIGHTNVGKTSLLRTLLRDSDFGEVKNASATTRHV---VAVDILS-KDNVPLITLHDT 68 Query: 92 PG 93 PG Sbjct: 69 PG 70 >gi|300691802|ref|YP_003752797.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia solanacearum PSI07] gi|299078862|emb|CBJ51523.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia solanacearum PSI07] Length = 447 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 11/175 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + DF +N P L+D Sbjct: 183 IAIVGRPNVGKSTLVNALIGEERVI-AFDMPGTTRDAIYV---DFE--RNGKP-YTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D + + D + F+ + + Sbjct: 236 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + K D L + ++ A+ I S+ +R GI L K++ Sbjct: 294 LVIGVNKWDGLDGHARDRIKHDLERKLQFLSFANVHYI--SAKQRSGIGALMKSV 346 >gi|291522460|emb|CBK80753.1| GTP-binding protein Era [Coprococcus catus GD/7] Length = 300 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 21/179 (11%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKS+L+N L+ +K +A TSN P T++ + +++ + + VD PG Sbjct: 14 GRPNVGKSTLMNHLIGQK-IAITSNKPQTTRNR---IQTVYTSEEGQI---VFVDTPGIH 66 Query: 96 YARAPKKNVDSWGGLIVRYLSER--STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 A+ + G +V ++ER S + + L++ + +Q + L K Sbjct: 67 KAK------NKLGEYMVT-VAERTLSEVDVILWLVEPTTFIGAGEQHIAEQLRKTKTPII 119 Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 +V+ KID + ++++ K + E++P S++K E L K I++ + Y Sbjct: 120 LVINKIDTVKREEILKSIDAYKDI-----CDFAEIVPCSALKGDNTEDLIKVIMKYLPY 173 >gi|154483558|ref|ZP_02026006.1| hypothetical protein EUBVEN_01262 [Eubacterium ventriosum ATCC 27560] gi|149735468|gb|EDM51354.1| hypothetical protein EUBVEN_01262 [Eubacterium ventriosum ATCC 27560] Length = 441 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 11/169 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN + + SN G T+ +++K N + Sbjct: 178 PRIAIVGKPNVGKSSIINKITGESRVI-VSNIAGTTRDAI------DTDVKWNGKDYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + + Sbjct: 231 DTAGLRRKSKVKEEIEKYS--IIRTVTAVERADVVIIVIDAVEGVTEQDAKIAGIAHENG 288 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 I + K D + T E K + ++ P A I + +R Sbjct: 289 KGIIIAVNKWDAIEKNDKTVYEYTNKVRDILSFMPYAEIMFISAKTGQR 337 >gi|254567982|ref|XP_002491101.1| Protein of unknown function [Pichia pastoris GS115] gi|238030898|emb|CAY68821.1| Protein of unknown function [Pichia pastoris GS115] Length = 576 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 15/88 (17%) Query: 34 FSGRSNVGKSSLINILVNRK-NLARTSNAPGRTQHLNFFVPKDFS-NLKNNLPAMALVDM 91 F G +N GKS+LI +V + + +T N PG HL F K + NN ++ LVD+ Sbjct: 265 FLGMTNTGKSTLIRSIVGKDYSKKQTENGPG-VSHLPSFTRKPMKFKMDNN--SLELVDL 321 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS 119 PGY AP G + +YL E + Sbjct: 322 PGYT---AP-------NGGVYKYLKEEN 339 >gi|82703888|ref|YP_413454.1| tRNA modification GTPase TrmE [Nitrosospira multiformis ATCC 25196] gi|123543757|sp|Q2Y5A9|MNME_NITMU RecName: Full=tRNA modification GTPase mnmE gi|82411953|gb|ABB76062.1| tRNA modification GTPase trmE [Nitrosospira multiformis ATCC 25196] Length = 452 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 12/114 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSL+N L + +A + PG T+ V + ++ +P M L+D Sbjct: 218 IALVGQPNVGKSSLLNRLAG-EEVALVTEVPGTTRD----VIRQVIEIE-GVP-MHLLDT 270 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 G R + ++ G R +++++ V LL+D R G+ DQ + + L Sbjct: 271 AGL---RETEDAIEKMGMARTRSTIDKASI--VLLLVDSRVGITPEDQAILASL 319 >gi|41614953|ref|NP_963451.1| hypothetical protein NEQ157 [Nanoarchaeum equitans Kin4-M] gi|40068677|gb|AAR39012.1| NEQ157 [Nanoarchaeum equitans Kin4-M] Length = 319 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + SG NVGKS+L+NIL N K +T+N P T+ + +K +A++D Sbjct: 159 VVISGLPNVGKSTLLNILTNNK--VKTANYPFTTKQIL------IGKIKTPFGDIAVIDT 210 Query: 92 PGYGYARAPKKN-VDSWGGLIVRYLSE 117 PG K N ++ L +RYL++ Sbjct: 211 PGILDRPLDKINKIEKRAVLALRYLAD 237 >gi|70726671|ref|YP_253585.1| ribosomal biogenesis GTPase [Staphylococcus haemolyticus JCSC1435] gi|68447395|dbj|BAE04979.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 294 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 GL P+A I G NVGKS+LIN L RKN+A+T N PG T+ + Sbjct: 115 GLKPRAIRAMIV--GIPNVGKSTLINKLA-RKNIAQTGNKPGVTKQQQWI 161 >gi|326560804|gb|EGE11171.1| HSR1-related GTP-binding protein [Moraxella catarrhalis 103P14B1] gi|326574435|gb|EGE24377.1| HSR1-related GTP-binding protein [Moraxella catarrhalis 101P30B1] gi|326575972|gb|EGE25895.1| HSR1-related GTP-binding protein [Moraxella catarrhalis CO72] Length = 466 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ G +NVGK+SL+ L+ + NA T+H+ V D + K+N+P + L D Sbjct: 13 ISIIGHTNVGKTSLLRTLLRDSDFGEVKNASATTRHV---VAVDILS-KDNVPLITLHDT 68 Query: 92 PG 93 PG Sbjct: 69 PG 70 >gi|297745784|emb|CBI15840.3| unnamed protein product [Vitis vinifera] Length = 68 Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 13/65 (20%) Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGY--GYARAPKKNVDSWGGLIVRYLS 116 S+ PG TQ +NFF NL + L +VD+PGY GY + K D+W L+ L Sbjct: 2 SDKPGLTQTMNFF------NLGSKL---CVVDLPGYSSGYGKTEVK--DAWEELVSMRLQ 50 Query: 117 ERSTL 121 E+++L Sbjct: 51 EKNSL 55 >gi|254786612|ref|YP_003074041.1| GTP-binding protein EngA [Teredinibacter turnerae T7901] gi|259645886|sp|C5BLV6|DER_TERTT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|237684664|gb|ACR11928.1| GTP-binding protein EngA [Teredinibacter turnerae T7901] Length = 464 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 12/116 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A +N G T+ + + + + +V Sbjct: 3 PTIALVGRPNVGKSTLFNRLTKTRD-AIVANFAGLTR------DRKYGDAEFEGKRFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 D G ++ +DS + + L + + L+DCR G+ +D + L Sbjct: 56 DTGGIS---GDEEGIDSV--MAEQSLQAIAESDIILFLVDCRDGLTHVDSQIAQHL 106 >gi|15896965|ref|NP_350314.1| tRNA modification GTPase TrmE [Clostridium acetobutylicum ATCC 824] gi|21363021|sp|Q97CW2|MNME_CLOAB RecName: Full=tRNA modification GTPase mnmE gi|15026841|gb|AAK81654.1|AE007868_10 Predicted GTPase, ThdF family [Clostridium acetobutylicum ATCC 824] gi|325511142|gb|ADZ22778.1| tRNA modification GTPase TrmE [Clostridium acetobutylicum EA 2018] Length = 459 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 16/126 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N+L++ K A ++ PG T+ V +++ N+ + +P + +VD G Sbjct: 230 GKPNVGKSSLLNLLLDEKR-AIVTDIPGTTRD----VIEEYINI-SGIP-IKIVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R + ++ G + R + + +ID + D ++ ++ DKK Y + Sbjct: 282 --RETEDVIEKMG--VERSKEKMENADLIIFMIDSSKKIDAEDLEIIDYIKDKK---YIV 334 Query: 155 VLTKID 160 +L K+D Sbjct: 335 LLNKVD 340 >gi|326436198|gb|EGD81768.1| eukaryotic translation initiation factor 5B [Salpingoeca sp. ATCC 50818] Length = 1093 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 27/146 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKDF-----------S 77 P A G + GK+ L++ + R++ + A G TQ + ++P D S Sbjct: 506 PICAVLGHVDTGKTKLLDKI--RRSHVQDGEAGGITQQIGATYIPTDEIERQTAKVKKGS 563 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + +P + ++D PG+ +S+ L R S L++D HG++ Sbjct: 564 KFEIKVPGLLVIDTPGH----------ESFSNLRSRG---SSLCNMAVLVVDIMHGIEPQ 610 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLS 163 + L K+ + I L K+D+L+ Sbjct: 611 TAESLEMLRKRKAPFVIALNKVDRLN 636 >gi|257866268|ref|ZP_05645921.1| tRNA modification GTPase mnmE [Enterococcus casseliflavus EC30] gi|257873216|ref|ZP_05652869.1| tRNA modification GTPase mnmE [Enterococcus casseliflavus EC10] gi|257800226|gb|EEV29254.1| tRNA modification GTPase mnmE [Enterococcus casseliflavus EC30] gi|257807380|gb|EEV36202.1| tRNA modification GTPase mnmE [Enterococcus casseliflavus EC10] Length = 481 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ R+ A ++ G T+ V +++ N++ +P + L+D Sbjct: 247 AIIGRPNVGKSSLLNHLL-REEKAIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 299 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R + + L+++ G+ Q D+ L+ A S Sbjct: 300 GI---RETEDIVEKIG--VERSRKALAEAELILLVLNQSEGLTQEDK---QLLELTAGSR 351 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +I+L L P A T E +Y A + S + +G++ L +AI Sbjct: 352 RIILLNKTDLEPKLA--TAELAQY------AADEPIFSVSVLTSEGLDQLEQAI 397 >gi|90408609|ref|ZP_01216764.1| GTP-binding protein EngA [Psychromonas sp. CNPT3] gi|90310301|gb|EAS38431.1| GTP-binding protein EngA [Psychromonas sp. CNPT3] Length = 488 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+LIN ++ + + + PG T+ + ++P + + L Sbjct: 199 PIKLAIIGKPNVGKSTLINRILGEERVV-VFDQPGTTRD-SIYIP-----MSRDDREYIL 251 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + +++ L V L+ID R G+ + D + + Sbjct: 252 IDTAGVRKRKKVNETVEKFS--VIKTLKAIEDANVVLLVIDARDGIAEQDLCLLGYTLNS 309 Query: 149 AVSYQIVLTKIDKLS 163 S I + K D ++ Sbjct: 310 GRSLVIAVNKWDGMT 324 >gi|329565801|gb|AEB92237.1| tRNA modification GTPase [Thermoanaerobacter thermohydrosulfuricus] Length = 404 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 14/128 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N L+ ++N A ++ PG T+ + +++ N+K +P + L+D Sbjct: 191 AIIGKPNVGKSSLLNALL-KENRAIVTDIPGTTRD----IIEEYVNVK-GIP-IKLIDTA 243 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + + + + ++D + + D ++F L K + + Sbjct: 244 GI---RDTDELVEKIG--VAKSKEVLAEADLILFVLDASRELTKEDYEIFDILVGKNIVF 298 Query: 153 QIVLTKID 160 VL KID Sbjct: 299 --VLNKID 304 >gi|327399013|ref|YP_004339882.1| ferrous iron transport protein B [Hippea maritima DSM 10411] gi|327181642|gb|AEA33823.1| ferrous iron transport protein B [Hippea maritima DSM 10411] Length = 713 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IAF+G NVGK+++IN + K + N PG T V K + ++ + L D+ Sbjct: 3 IAFAGNPNVGKTAIINAIAGSK--LKVGNWPGVT------VEKKEAEVEFKGKTITLTDL 54 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG Y+ +P + I R C+ +ID + + + + +K + Sbjct: 55 PGV-YSLSPYSIEER----ITRDFIFEQDPDCIVNVIDSTNIERNLYLTLLLMETEKPLI 109 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 I L D+ + LE ++ +V+PTS++KR+G++ L + Sbjct: 110 --IALNMFDEFKKLGYEIDLEGLSEML------GVKVVPTSAIKREGLQKLME 154 >gi|148549493|ref|YP_001269595.1| GTP-binding protein Era [Pseudomonas putida F1] gi|325275443|ref|ZP_08141374.1| GTPase Era [Pseudomonas sp. TJI-51] gi|189037660|sp|A5W8F1|ERA_PSEP1 RecName: Full=GTPase Era gi|148513551|gb|ABQ80411.1| GTP-binding protein Era [Pseudomonas putida F1] gi|313500338|gb|ADR61704.1| Era [Pseudomonas putida BIRD-1] gi|324099419|gb|EGB97334.1| GTPase Era [Pseudomonas sp. TJI-51] Length = 300 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 12 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGDVQAIYVD 63 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG A N RY++ ++ L+ V ++I K D+D + Sbjct: 64 TPGMHKANDKALN---------RYMNRNASAALKDVDVVIFVVDRTKWTDEDQLVLERVQ 114 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ +++ K D++ E + ++L P A EV+P S+ + +E L I Sbjct: 115 YVTGPLIIAVNKTDRMEEKA--ELIPHLQWLQEQLPNA--EVMPISAQQGHNLEALEAQI 170 >gi|157161492|ref|YP_001458810.1| putative GTPase [Escherichia coli HS] gi|157067172|gb|ABV06427.1| putative GTPase [Escherichia coli HS] Length = 290 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|113476532|ref|YP_722593.1| GTP-binding protein Era [Trichodesmium erythraeum IMS101] gi|110167580|gb|ABG52120.1| GTP-binding protein Era [Trichodesmium erythraeum IMS101] Length = 310 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 18/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N LV +K +A TS T++ + L + VD Sbjct: 21 VGIIGRPNVGKSTLMNQLVGQK-VAITSPVAQTTRN------RLRGILTTQAAQIIFVDT 73 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG P+ + G ++V+ ++ V L++D D+ + + LDK Sbjct: 74 PGI---HKPQHQL---GKVLVQNAKVAIQSVDLVLLIVDGSVIAGGGDRYIINLLDKIQT 127 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D L P A + LI +P ++I S+V +G+E+L+ ++E + Sbjct: 128 PVILGMNKLD-LQPQDAWKIEASYYQLIHPHPW---QIIKFSAVTGEGVEILQDLLIEQM 183 Query: 211 N 211 Sbjct: 184 E 184 >gi|329924033|ref|ZP_08279296.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF5] gi|328940872|gb|EGG37180.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF5] Length = 290 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ K + + +D Sbjct: 1 MAIIGRPNVGKSTLMNQVIGQK-IAIMSDKPQTTRN------KIHGVYTTSDSQVVFLDT 53 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + R K D + L E + L+D G+ D+ + L K Sbjct: 54 PGI-HKRQSKLG-DYMNQTALSTLGE---VEAALFLVDASEGIGGGDRYIAEQLQKIKTP 108 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +V+ KIDK+ P +E+ + L E++P S+ Sbjct: 109 IILVMNKIDKIEPPALLPLIEQYRKL-----HDFAEIVPISA 145 >gi|326559210|gb|EGE09641.1| HSR1-related GTP-binding protein [Moraxella catarrhalis 46P47B1] gi|326569664|gb|EGE19716.1| HSR1-related GTP-binding protein [Moraxella catarrhalis BC1] Length = 466 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ G +NVGK+SL+ L+ + NA T+H+ V D + K+N+P + L D Sbjct: 13 ISIIGHTNVGKTSLLRTLLRDSDFGEVKNASATTRHV---VAVDILS-KDNVPLITLHDT 68 Query: 92 PG 93 PG Sbjct: 69 PG 70 >gi|307707079|ref|ZP_07643876.1| small GTP-binding domain protein [Streptococcus mitis SK321] gi|307617605|gb|EFN96775.1| small GTP-binding domain protein [Streptococcus mitis SK321] Length = 436 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 19/158 (12%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 169 EENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDGQ- 223 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G + +N + + ++R + V ++I+ G+++ D+ + Sbjct: 224 -EFTMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVINAEEGIREYDKRIAG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++++ Sbjct: 281 FAHEAGKGMIIVVNKWD---------TLEKDNHTMKSW 309 >gi|260892064|ref|YP_003238161.1| GTP-binding protein Era [Ammonifex degensii KC4] gi|260864205|gb|ACX51311.1| GTP-binding protein Era [Ammonifex degensii KC4] Length = 300 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 12/132 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+LIN LV +K +A S+ P T+H + L + VD Sbjct: 11 VSVVGRPNVGKSTLINHLVGQK-VAIVSDKPQTTRH------RILGVLTLPEAQIVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P+ + + L+ L + V L + D + L K V Sbjct: 64 PGI---HKPRHRLGEY--LVTLALGALKGVDLVLFLSEATSPPGAGDYFILEQLKKAEVP 118 Query: 152 YQIVLTKIDKLS 163 +VL KID +S Sbjct: 119 VILVLNKIDLIS 130 >gi|218561451|ref|YP_002394364.1| hypothetical protein ECS88_4890 [Escherichia coli S88] gi|218368220|emb|CAR06036.1| conserved hypothetical protein with GTPase domain [Escherichia coli S88] Length = 311 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 58 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMIIT 110 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 111 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 164 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT + R + HP V+ S+ Sbjct: 165 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHP-VVAVSACT 223 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 224 GWELDTLVSALMTAL 238 >gi|71280742|ref|YP_270776.1| GTP-binding protein Era [Colwellia psychrerythraea 34H] gi|71146482|gb|AAZ26955.1| GTP-binding protein Era [Colwellia psychrerythraea 34H] Length = 305 Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust. Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 26/184 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ +K ++ TS P T+H + L LVD Sbjct: 13 IAIVGRPNVGKSTLLNALLGQK-ISITSKKPQTTRHRILGI------LTEENRQAVLVDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S + + + L++ H K D+ V S + + Sbjct: 66 PGLHTEEKRAIN-----RLMNRAASSSIAEVELIMFLVEGTHWTKD-DELVLSKVKQSGT 119 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYL--IRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 +V+ K D + +K + L ++ H +++P + K G++ +R+ Sbjct: 120 PCILVVNKTDNIP--------DKDELLPHLQKLGAMHDFRDIVPICATKGHGVDTIRQLC 171 Query: 207 LETI 210 L ++ Sbjct: 172 LTSL 175 >gi|319651095|ref|ZP_08005229.1| TRNA modification GTPase [Bacillus sp. 2_A_57_CT2] gi|317397265|gb|EFV77969.1| TRNA modification GTPase [Bacillus sp. 2_A_57_CT2] Length = 461 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 46/171 (26%), Positives = 90/171 (52%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ +N A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 230 GRPNVGKSSLLNSLVH-ENKAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L + L+++ + D+++F KAV V Sbjct: 282 --RETEDIVERIGVEKSRQVLKEADL--ILLVLNYSDELTSEDENIF-----KAVEGMDV 332 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + ++K T + ++ + +R + H +++ TS ++ +G++ L +AI Sbjct: 333 IVIVNK---TDLDQKIDMNR--VREL-SKHHKLVTTSLLEDQGVDDLEEAI 377 >gi|294786873|ref|ZP_06752127.1| GTP-binding protein Era [Parascardovia denticolens F0305] gi|315226509|ref|ZP_07868297.1| GTP-binding protein Era [Parascardovia denticolens DSM 10105] gi|294485706|gb|EFG33340.1| GTP-binding protein Era [Parascardovia denticolens F0305] gi|315120641|gb|EFT83773.1| GTP-binding protein Era [Parascardovia denticolens DSM 10105] Length = 352 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 9/68 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IA GR NVGKS+LIN +V K +A TS+ P T+ + V D L LVD Sbjct: 46 IAVVGRPNVGKSTLINAIVG-KQVAITSSKPETTRKAIRAIVTTDDCQL-------VLVD 97 Query: 91 MPGYGYAR 98 PG+ R Sbjct: 98 TPGFHKPR 105 >gi|255321133|ref|ZP_05362299.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SK82] gi|262380178|ref|ZP_06073333.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SH164] gi|255301687|gb|EET80938.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SK82] gi|262298372|gb|EEY86286.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SH164] Length = 469 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 9/138 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 KA +A GR NVGKS+L+N L+ + + + PG T+ + ++P + + Sbjct: 173 KATGLRLAIIGRPNVGKSTLVNRLLGEERVV-AYDEPGTTRD-SVYIP-----FERDGRQ 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L V +++D R GV + D + + Sbjct: 226 YTLIDTAGVRRKGKVDEMIEKFS--VVKTLQAMKDAHVVVVVLDAREGVVEQDLHLIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLS 163 + + I + K D +S Sbjct: 284 LEAGRAMVIAINKWDNMS 301 >gi|300770935|ref|ZP_07080812.1| ribosome-associated GTPase EngA [Sphingobacterium spiritivorum ATCC 33861] gi|300762208|gb|EFK59027.1| ribosome-associated GTPase EngA [Sphingobacterium spiritivorum ATCC 33861] Length = 441 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 9/131 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+ GR NVGKSSL N L+ + T A G T +D + N + Sbjct: 182 PKYTIVGRPNVGKSSLTNALLGKDRNIVTPVA-GTT--------RDSIRIHYNQFGHEFL 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 + G R K N D ++R + V L++D + G++ D ++F +K Sbjct: 233 LIDTAGMRRKSKVNEDIEFYSVMRTIKALEDSDVVILMLDAQDGIEAQDINIFHLAEKNK 292 Query: 150 VSYQIVLTKID 160 IV+ K D Sbjct: 293 KGVMIVVNKWD 303 >gi|212690606|ref|ZP_03298734.1| hypothetical protein BACDOR_00092 [Bacteroides dorei DSM 17855] gi|212666852|gb|EEB27424.1| hypothetical protein BACDOR_00092 [Bacteroides dorei DSM 17855] Length = 396 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A +A GR N GKSSLIN L ++ A S+ PG T V K ++ P Sbjct: 7 PSANRLHVALFGRRNSGKSSLINALTG-QDTALVSDIPGTTTD---TVSKAM-EIQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I+R L LL C + ++ Sbjct: 62 CL-FIDTPGF----------DDEGELGEMRIIRTLKAIEQTDIALLL--CEDEAHEEEKK 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L++K + ++L K D ++ + T I P VI S+ +R GI+ Sbjct: 109 WMKQLEEKNIPVILLLNKAD------IRKDIASTLLRIEKDCGQKPLVI--SAKERTGIK 160 Query: 201 VLRKAILETI 210 + +AILE + Sbjct: 161 KIHQAILEKL 170 >gi|190574024|ref|YP_001971869.1| GTP-binding protein EngA [Stenotrophomonas maltophilia K279a] gi|229463762|sp|B2FNR1|DER_STRMK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|190011946|emb|CAQ45567.1| putative GTP-binding protein [Stenotrophomonas maltophilia K279a] Length = 465 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 19/153 (12%) Query: 21 IGLLPKAGPPE----------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 I LP+ G E IAF GR NVGKS+L+N ++ + + S+ PG T+ + Sbjct: 160 IQRLPEEGSGEELDNDPNRIRIAFVGRPNVGKSTLVNRILGEERMI-ASDVPGTTRD-SI 217 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 V +L+ + L+D G + V+ + +V+ + + L++D Sbjct: 218 AV-----DLERDGREYRLIDTAGLRRRSRVDEVVEKFS--VVKTMQSIEQCQVAVLMLDA 270 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 GV D V + + I + K D L+ Sbjct: 271 TEGVTDQDATVLGAVLDAGRALVIAINKWDGLT 303 >gi|161485612|ref|YP_386558.2| GTP-binding protein EngA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 455 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 21/141 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMAL 88 P+IA GR NVGKS+L N L+ R N A T + PG T+ + +V K + Sbjct: 3 PKIALIGRPNVGKSTLFNRLI-RSNRAITHDRPGVTRDRMEGYV-------KVGDRKFII 54 Query: 89 VDMPGY------GYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQ 139 +D G A P + + + I+R E S C L++D R G+ D+ Sbjct: 55 IDTGGITLDEHAAVAEGPDE-LRGFEAEILRQTEEAIADSVALC--LVVDGREGLTPFDE 111 Query: 140 DVFSFLDKKAVSYQIVLTKID 160 + +++ K + + K+D Sbjct: 112 SLAAYVRKSGKPVLLAVNKVD 132 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 9/132 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR N GKSSL+N L + + S+ G T +D ++ L Sbjct: 188 PLKLAMLGRPNAGKSSLVNALSGSRRMI-VSDVAGTT--------RDSVDIAVELGGRRY 238 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 V + G R K + L + +++D G+ Q D+ + LD++ Sbjct: 239 VFVDTAGVRRRAKIQDPVERYSVNSSLKSTTKADVTLVVLDAVEGLTQQDKRLIDLLDER 298 Query: 149 AVSYQIVLTKID 160 + +V+ KID Sbjct: 299 KTPFMLVINKID 310 >gi|146308511|ref|YP_001188976.1| GTP-binding protein EngA [Pseudomonas mendocina ymp] gi|166225842|sp|A4XY28|DER_PSEMY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145576712|gb|ABP86244.1| small GTP-binding protein [Pseudomonas mendocina ymp] Length = 492 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 16/184 (8%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E +A GR NVGKS+L+N ++ + + A T + ++P + + K Sbjct: 190 GPSEKDGIKLAIIGRPNVGKSTLVNRMLGEERVIVYDQAG--TTRDSIYIPFERDDEKYT 247 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L A V G + K +V V+ L V ++D R GV D ++ Sbjct: 248 LIDTAGVRRRGKIFEAVEKFSV-------VKTLQAIQDSNVVVFVMDAREGVVDHDLNLL 300 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 F+ + + I L K D + Q+ KT+ R + ++ S++ G+ L Sbjct: 301 GFVLESGRALVIALNKWDGMD--QGQKDYVKTELERRLFFVDFADIHFISALHGTGVGHL 358 Query: 203 RKAI 206 K++ Sbjct: 359 YKSV 362 >gi|12045187|ref|NP_072998.1| GTP-binding protein EngA [Mycoplasma genitalium G37] gi|255660444|ref|ZP_05405853.1| GTP-binding protein EngA [Mycoplasma genitalium G37] gi|1723150|sp|P47571|DER_MYCGE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|3844909|gb|AAC71553.1| GTP-binding protein engA [Mycoplasma genitalium G37] gi|166078673|gb|ABY79291.1| GTP-binding protein engA [synthetic Mycoplasma genitalium JCVI-1.0] Length = 448 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 13/142 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L N L+ +K +A S+ P T+ F + + +A +D Sbjct: 4 VAIIGRTNVGKSTLFNRLI-QKPMAIVSDTPNTTRDRIFGIGEWLKR------KIAFIDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK-KAV 150 G + P + + + ++ + S + + L+ + + D V L K K Sbjct: 57 GGLIAKQTPLQQL-----IALQVQAALSQAKAIIFLVSLQEQLNSDDFYVAKVLKKNKDK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLE 172 +V+ K + +P TA+ETL+ Sbjct: 112 PVILVVNKAENFNPKTAEETLK 133 >gi|295111068|emb|CBL27818.1| tRNA modification GTPase TrmE [Synergistetes bacterium SGP1] Length = 456 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 15/149 (10%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +GLL + G + SGR NVGKSSL+N L+ +++ A + PG T+ + + + Sbjct: 213 LGLLLREGI-RVVISGRPNVGKSSLLNALL-KQSRAIVTAVPGTTRDI-----IEETVTY 265 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +P + LVD G R P V++ G R +++ + C++LL D ++ D+D Sbjct: 266 RGIP-IRLVDTAGL---RVPSDEVEASGIERARAALKQADI-CLWLL-DGSAPLEDADRD 319 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 L + IVL K DK T + Sbjct: 320 YIRSLGTR--ESIIVLNKADKALAVTEDD 346 >gi|258647985|ref|ZP_05735454.1| ribosome-associated GTPase EngA [Prevotella tannerae ATCC 51259] gi|260851826|gb|EEX71695.1| ribosome-associated GTPase EngA [Prevotella tannerae ATCC 51259] Length = 437 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 12/144 (8%) Query: 30 PEIAFSGRSNVGKSSLINILV-NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P A GR N GKSSLIN + +N+ R L + F L Sbjct: 176 PHFAIVGRPNAGKSSLINAFIGEERNIVTDIAGTTRDSILTRYDKFGFD--------FYL 227 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + K N D ++R + LLID G++ D ++F + K Sbjct: 228 VDTA--GIRKKGKVNEDLEFYSVMRSIRAIEHSDVCILLIDATRGIESQDMNIFKVIQKN 285 Query: 149 AVSYQIVLTKIDKLSPTTAQETLE 172 S + + K D ++ +QE ++ Sbjct: 286 NKSLVVAINKWD-IAENKSQEAIK 308 >gi|89095393|ref|ZP_01168307.1| GTP-binding protein [Oceanospirillum sp. MED92] gi|89080331|gb|EAR59589.1| GTP-binding protein [Oceanospirillum sp. MED92] Length = 288 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 11/69 (15%) Query: 26 KAGPPEIAF-SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 +AG P A G NVGKS+LIN L+ RK +A+ N P T+ F K+ Sbjct: 90 EAGRPVRAMIMGIPNVGKSTLINALLGRK-IAKVGNEPAVTKSQTRFTTKN--------- 139 Query: 85 AMALVDMPG 93 MAL D PG Sbjct: 140 GMALSDTPG 148 >gi|329904161|ref|ZP_08273691.1| GTP-binding protein EngA [Oxalobacteraceae bacterium IMCC9480] gi|327548117|gb|EGF32835.1| GTP-binding protein EngA [Oxalobacteraceae bacterium IMCC9480] Length = 340 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 9/138 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+++N L+ + + + PG T+ + +P + S + L A + Sbjct: 137 IAIVGRPNVGKSTMVNTLLGEERVI-AFDMPGTTRD-SIEIPFERSGQQYTLIDTAGIRR 194 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + K +V V+ L S V LL+D + + + D + F+ + + Sbjct: 195 RGKVFEAIEKFSV-------VKTLQSISEANVVLLLLDAQQDISEQDAHIAGFILESGRA 247 Query: 152 YQIVLTKIDKLSPTTAQE 169 + + K D L+ + E Sbjct: 248 LVVGVNKWDGLTSSRRDE 265 >gi|323938863|gb|EGB35085.1| hypothetical protein ERDG_04520 [Escherichia coli E482] Length = 290 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|307266976|ref|ZP_07548493.1| GTP-binding protein Era [Thermoanaerobacter wiegelii Rt8.B1] gi|306918025|gb|EFN48282.1| GTP-binding protein Era [Thermoanaerobacter wiegelii Rt8.B1] Length = 302 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 23/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N ++ K +A TS P T++ + L + + VD Sbjct: 8 VALVGRTNVGKSTLLNAILQEK-IAITSPKPQTTRNTIHGI------LTTDEYQVIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIV-RYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + + + R L E + + +I+ + D+ + L + Sbjct: 61 PG---IHKPKSKLSEFMIEVAKRTLKE---VDLILYMIEPDTEIGPGDRYIIEHLKEVDT 114 Query: 151 SYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID + +ET++ K +Y ++ V+ S+++ K I++L++ I+ Sbjct: 115 PVILVVNKIDLVPEKRVEETIKIFKEQYEFKD-------VVAISAIENKNIDLLKEKIV 166 >gi|295424887|ref|ZP_06817602.1| GTP-binding protein Era [Lactobacillus amylolyticus DSM 11664] gi|295065453|gb|EFG56346.1| GTP-binding protein Era [Lactobacillus amylolyticus DSM 11664] Length = 302 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 22/177 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N LV K +A TSN P T++ + D + V Sbjct: 12 VAIVGRPNVGKSTLMNRLVGEK-VAITSNKPQTTRNRISGIYTSDDMQ--------VVFV 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG P +D + + S + + V +++ K D+ V L K Sbjct: 63 DTPG---IFKPHSKLDEY--MDKASYSSLNDVDLVMFMVEPDEAGKD-DKFVADLLQKVK 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V +++ K+D++ P ++ + L E +P S+ + GI L A+ Sbjct: 117 VPVFLIINKVDEIHPDKLLPIIDSYRKL-----GDFAEFLPVSATEGIGIPDLLTAL 168 >gi|85860146|ref|YP_462348.1| GTP-binding protein [Syntrophus aciditrophicus SB] gi|123738843|sp|Q2LVR8|ERA_SYNAS RecName: Full=GTPase Era gi|85723237|gb|ABC78180.1| GTP-binding protein [Syntrophus aciditrophicus SB] Length = 306 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 23/174 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L+N ++ K LA ++ P T++ + N N VD Sbjct: 18 IGIIGRPNVGKSTLLNGILGEK-LAIITHKPQTTRNRIMGI----RNADN--AQFIFVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL-IDCRHGVKQIDQDVFSFLDKKAV 150 PG A P L+VR +E T + LL ++ V D + L + Sbjct: 71 PGIHSASTPLNR------LMVRTATETFTDSDILLLVVEAGQAVHPEDLPIIESLKESGT 124 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVL 202 ++L KID + E+ L+ Y H E+IP S++ +GI +L Sbjct: 125 ISFLILNKIDLIRK-------EQLLPLMDAYRNLHSFAELIPISALTGEGIPLL 171 >gi|94986202|ref|YP_605566.1| GTP-binding protein EngA [Deinococcus geothermalis DSM 11300] gi|166198711|sp|Q1IWI7|DER_DEIGD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|94556483|gb|ABF46397.1| Small GTP-binding protein domain [Deinococcus geothermalis DSM 11300] Length = 441 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 17/131 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N LV R+ A ++ PG T+ K+ L +N + LVD Sbjct: 4 VAIVGRPNVGKSSLFNRLVGRRE-AVVADFPGVTRD-----AKEGLMLYHN-HRIVLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G D W I R +E + + V ++D R G+ D +V +L + Sbjct: 57 GGLWSG-------DEWEQAI-REKAEWAMEGAQAVIFVVDPREGLTAADYEVADWLRRLG 108 Query: 150 VSYQIVLTKID 160 + KID Sbjct: 109 KPVIVAANKID 119 >gi|218707941|ref|YP_002415460.1| hypothetical protein ECUMN_4880 [Escherichia coli UMN026] gi|331650750|ref|ZP_08351778.1| conserved hypothetical protein [Escherichia coli M718] gi|218435038|emb|CAR15991.1| conserved hypothetical protein with GTPase domain [Escherichia coli UMN026] gi|331051204|gb|EGI23253.1| conserved hypothetical protein [Escherichia coli M718] Length = 303 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 50 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 102 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 103 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 156 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 157 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 213 Query: 196 RKGIEV 201 R G E+ Sbjct: 214 RTGWEL 219 >gi|160915095|ref|ZP_02077308.1| hypothetical protein EUBDOL_01103 [Eubacterium dolichum DSM 3991] gi|158432894|gb|EDP11183.1| hypothetical protein EUBDOL_01103 [Eubacterium dolichum DSM 3991] Length = 436 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 21/191 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G GR NVGKSSL+N ++++ + SN G T+ + F+ + Sbjct: 173 GMTRFCLIGRPNVGKSSLVNAILDQDRVI-VSNIEGTTRDA---IDTPFTREGKD---YV 225 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G +N++ + L ERS + V ++ID G+++ D+ V + + Sbjct: 226 VIDTAGIRRRGKVYENIEKYSVLRAMSAIERSDV--VLVVIDGETGIREQDKHVAGYAHE 283 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH------PEVIPTSSVKRKGIEV 201 IV K D A E E+T I AH ++ S++K++ I Sbjct: 284 AGKGVIIVYNKWD------AVEKDERTMVKIEKEIYAHFLYLNYAPIVFVSALKKQRIHT 337 Query: 202 LRKAILETINY 212 L I E +Y Sbjct: 338 LLPMIDEVHDY 348 >gi|15595968|ref|NP_249462.1| GTP-binding protein Era [Pseudomonas aeruginosa PAO1] gi|116048687|ref|YP_792513.1| GTP-binding protein Era [Pseudomonas aeruginosa UCBPP-PA14] gi|218893286|ref|YP_002442155.1| GTP-binding protein Era [Pseudomonas aeruginosa LESB58] gi|254239133|ref|ZP_04932456.1| GTP-binding protein Era [Pseudomonas aeruginosa C3719] gi|254245026|ref|ZP_04938348.1| GTP-binding protein Era [Pseudomonas aeruginosa 2192] gi|296390879|ref|ZP_06880354.1| GTP-binding protein Era [Pseudomonas aeruginosa PAb1] gi|313105593|ref|ZP_07791859.1| GTP-binding protein Era [Pseudomonas aeruginosa 39016] gi|12230892|sp|Q9XCX8|ERA_PSEAE RecName: Full=GTPase Era gi|122257793|sp|Q02HS3|ERA_PSEAB RecName: Full=GTPase Era gi|226741226|sp|B7UYX1|ERA_PSEA8 RecName: Full=GTPase Era gi|9946660|gb|AAG04160.1|AE004512_3 GTP-binding protein Era [Pseudomonas aeruginosa PAO1] gi|115583908|gb|ABJ09923.1| GTP-binding protein Era [Pseudomonas aeruginosa UCBPP-PA14] gi|126171064|gb|EAZ56575.1| GTP-binding protein Era [Pseudomonas aeruginosa C3719] gi|126198404|gb|EAZ62467.1| GTP-binding protein Era [Pseudomonas aeruginosa 2192] gi|218773514|emb|CAW29326.1| GTP-binding protein Era [Pseudomonas aeruginosa LESB58] gi|310878361|gb|EFQ36955.1| GTP-binding protein Era [Pseudomonas aeruginosa 39016] Length = 305 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 17 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGEVQAVYVD 68 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 P G ++ +K ++ + + R S V + + R + DQ V + + Sbjct: 69 TP--GLHKSGEKALNRY---MNRTASAALKDVDVVIFVVDRTRWTEEDQMVLERVQYVSC 123 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I + K D++ + L ++L + P A EV+P S+ ++VL K + E + Sbjct: 124 PVLIAVNKTDRIEEKA--DLLPHLEWLTQQLPKA--EVVPISAQHGTNLDVLEKLVAERL 179 >gi|300704410|ref|YP_003746013.1| GTPase [Ralstonia solanacearum CFBP2957] gi|299072074|emb|CBJ43406.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia solanacearum CFBP2957] Length = 447 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 11/175 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + DF +N P L+D Sbjct: 183 IAIVGRPNVGKSTLVNALIGEERVI-AFDMPGTTRDAIYV---DFE--RNGKP-YTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D + + D + F+ + + Sbjct: 236 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + K D L + ++ A+ I S+ +R GI L K++ Sbjct: 294 LVIGVNKWDGLDGHARDRIKHDLERKLQFLAFANVHYI--SAKQRTGIGALMKSV 346 >gi|148241565|ref|YP_001226722.1| GTP-binding protein EngA [Synechococcus sp. RCC307] gi|166225929|sp|A5GR60|DER_SYNR3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|147849875|emb|CAK27369.1| GTP-binding protein engA [Synechococcus sp. RCC307] Length = 452 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 15/135 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMA 87 P ++A GR NVGKSSL+N + +N A S G T+ ++ + ++ + K Sbjct: 176 PIQMAIVGRPNVGKSSLLNTVCG-ENRAIVSPIRGTTRDTIDTSIEREGQSWK------- 227 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G R+ + +G I R ERS + CV L+ID GV + DQ + + Sbjct: 228 LLDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDV-CV-LVIDAEEGVTEQDQRLAGRI 283 Query: 146 DKKAVSYQIVLTKID 160 +++ + +V+ K D Sbjct: 284 EEEGRACLVVVNKWD 298 >gi|154344250|ref|XP_001568069.1| translation initiation factor if-2 [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065403|emb|CAM40834.1| putative translation initiation factor IF-2 [Leishmania braziliensis MHOM/BR/75/M2904] Length = 817 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 27/139 (19%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKDF-----------SNLKNNL 83 G + GK+SL++ + R + A G TQ + F P++ N N+ Sbjct: 234 GHVDTGKTSLLDRI--RSTNVQGGEAGGITQQIGATFFPREALVSATEELIKKHNCNLNV 291 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + ++D PG+ N+ S G S L++D HG++Q ++ Sbjct: 292 PGLLVIDTPGH----ESFTNLRSRGS---------SLCDIAILVVDIMHGLEQQTRESIR 338 Query: 144 FLDKKAVSYQIVLTKIDKL 162 L +K + + L K+D+L Sbjct: 339 LLREKRCPFIVALNKVDRL 357 >gi|37522021|ref|NP_925398.1| tRNA modification GTPase TrmE [Gloeobacter violaceus PCC 7421] gi|46577365|sp|Q7NHT3|MNME_GLOVI RecName: Full=tRNA modification GTPase mnmE gi|35213020|dbj|BAC90393.1| glr2452 [Gloeobacter violaceus PCC 7421] Length = 453 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N +R + A ++ PG T+ V + N++ +P L D Sbjct: 221 VAIVGRPNVGKSSLLNAW-SRTDRAIVTDLPGTTRD----VVESMLNVQ-GIPVQVL-DT 273 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G I R + V L+ID G D D+F+ + ++ V Sbjct: 274 AGI---REATDTVERIG--IERSHAAAREADLVLLVIDRTEGWTCADSDIFAQVRERPVI 328 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K D P ++ ++ PTA P GI+ L AIL + Sbjct: 329 --VVVNKSDLEGPP----VYTPSRGVLATVPTAAP--------VGDGIDALEGAILAALG 374 >gi|84494349|ref|ZP_00993468.1| putative ABC transporter [Janibacter sp. HTCC2649] gi|84383842|gb|EAP99722.1| putative ABC transporter [Janibacter sp. HTCC2649] Length = 550 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 46/193 (23%), Positives = 76/193 (39%), Gaps = 30/193 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +G + GKSSL N LV + P K + + + PA L+D Sbjct: 60 VALAGATGSGKSSLFNQLVGTDVATVGARRP--------TTSKPTAGVWGDEPAGPLLDW 111 Query: 92 PGYG---YARAPKKNVDSWG---GLIV--------RYLSERSTLRCVYLLIDC------- 130 G + K V + G GL++ R S R V L+D Sbjct: 112 LGVATRHHVEGDKGGVAAVGSLDGLVLLDLPDFDSRETSNRVEAERVLELVDVFVWVTDP 171 Query: 131 -RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 ++ ++ D S L +VL ++D+LS + +E + L+ + VI Sbjct: 172 QKYADARLHDDYVSALATHDAVTIVVLNQVDRLSDSEIKECVADLTRLMTRDGISKATVI 231 Query: 190 PTSSVKRKGIEVL 202 PTS+ +G++VL Sbjct: 232 PTSARTGRGMDVL 244 >gi|83747951|ref|ZP_00944982.1| GTP-binding protein [Ralstonia solanacearum UW551] gi|207723168|ref|YP_002253567.1| gtp-binding protein [Ralstonia solanacearum MolK2] gi|83725369|gb|EAP72516.1| GTP-binding protein [Ralstonia solanacearum UW551] gi|206588362|emb|CAQ35325.1| gtp-binding protein [Ralstonia solanacearum MolK2] Length = 447 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 11/175 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + DF +N P L+D Sbjct: 183 IAIVGRPNVGKSTLVNALIGEERVI-AFDMPGTTRDAIYV---DFE--RNGKP-YTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D + + D + F+ + + Sbjct: 236 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + K D L + ++ A+ I S+ +R GI L K++ Sbjct: 294 LVIGVNKWDGLDGHARDRIKHDLERKLQFLAFANVHYI--SAKQRTGIGALMKSV 346 >gi|323143788|ref|ZP_08078456.1| ribosome biogenesis GTPase Der [Succinatimonas hippei YIT 12066] gi|322416501|gb|EFY07167.1| ribosome biogenesis GTPase Der [Succinatimonas hippei YIT 12066] Length = 568 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 30/182 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L N L ++ A ++ PG T+ + AL D Sbjct: 4 VALVGCPNVGKSTLFNRLTKTRD-ALVADFPGLTRDRKY--------------GRALFDG 48 Query: 92 PGY------GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 Y G A+ ++ D + + L V ++D R G+ D V ++ Sbjct: 49 REYIVIDTGGIAKDAEQPSDLTSKMTEQALLAIEECDLVLFMVDARAGIMPGDYQVAEYI 108 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 K +V KID L P A Y EV ++ +G+++L + Sbjct: 109 RKSGKKCAVVANKIDGLDPDIAGTEF---------YGLGLGEVHQIAAAHGRGVQILIED 159 Query: 206 IL 207 ++ Sbjct: 160 VI 161 >gi|317132159|ref|YP_004091473.1| GTP-binding protein Era [Ethanoligenens harbinense YUAN-3] gi|315470138|gb|ADU26742.1| GTP-binding protein Era [Ethanoligenens harbinense YUAN-3] Length = 296 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 +A GR NVGKS+L+N ++ K +A S P T++ + KD + L +D Sbjct: 9 VAIIGRPNVGKSTLLNAILGEK-IAIVSPKPQTTRNKITGVYTKDDTQL-------IFLD 60 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG+ PK + G + + + T + V +I+ R + + ++ L K+ Sbjct: 61 TPGW---HQPKTKL---GNYMAKSVDNTLTDVDAVLFVIEPREAPRPAETELLGKLGKQ- 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 V +V+ KID L+ +A + +R++ V+P S+ K G++ L Sbjct: 114 VPVLLVINKIDILADKSALMGVIAHWSKLRDFTA----VVPISAEKNDGVDAL 162 >gi|237725197|ref|ZP_04555678.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229436463|gb|EEO46540.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 396 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 30/190 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A +A GR N GKSSLIN L ++ A S+ PG T V K ++ P Sbjct: 7 PSANRLHVALFGRRNSGKSSLINALTG-QDTALVSDIPGTTTD---TVSKAM-EIQGIGP 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + +D PG+ D G L I+R L LL C + ++ Sbjct: 62 CL-FIDTPGF----------DDEGELGEMRIIRTLKAIEQTDIALLL--CEDEAHEEEKK 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L++K + ++L K D ++ + T I P VI S+ +R GI+ Sbjct: 109 WMKQLEEKNIPVILLLNKAD------IRKDIASTLLRIEKDCGQKPLVI--SAKERTGIK 160 Query: 201 VLRKAILETI 210 + +AILE + Sbjct: 161 KIHQAILEKL 170 >gi|227484953|ref|ZP_03915269.1| GTP-binding protein [Anaerococcus lactolyticus ATCC 51172] gi|227237108|gb|EEI87123.1| GTP-binding protein [Anaerococcus lactolyticus ATCC 51172] Length = 439 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR+NVGKS+L N LV ++ + T + G T+ + V K + +NN LV Sbjct: 4 PIVTLVGRTNVGKSTLFNRLVGKRK-SITEDVSGVTR--DRIVDK--AEWQNN--EFLLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDK 147 D G + NV+ +R E++ L + ++D + GV D D+ + + K Sbjct: 57 DTGGIDISSKDMMNVE------IRGQVEKALLETNLILFVVDGKEGVNPHDVDIANEIRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 IV K+D + L Y ++ S+ + KG+ L AI+ Sbjct: 111 YNKPVIIVANKVDNMQVPDD---------LYDFYSFGFDNLVMISAEQAKGLGDLLDAII 161 Query: 208 ETINY 212 I++ Sbjct: 162 SYIDF 166 >gi|229587033|ref|YP_002845534.1| GTP-binding protein EngA [Rickettsia africae ESF-5] gi|259645884|sp|C3PPD1|DER_RICAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|228022083|gb|ACP53791.1| GTP-binding protein [Rickettsia africae ESF-5] Length = 447 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 29/189 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I SGR N GKS+ IN L+N + L T G T+ + D+ KNN + L+D Sbjct: 181 QIVVSGRPNAGKSTFINALINDERLL-TGPEAGITRE---SIEIDWQ-YKNN--HIKLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTL------RCVYLLIDCRHGVKQIDQDVFSF 144 G K+++ LS T+ V L+ID +KQ D ++ S Sbjct: 234 TAGLRKKSTITKSLEK--------LSASDTINSIKFANTVILMIDALAPLKQQDLNIASH 285 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPT---SSVKRKGI 199 + + S IV+ K D + + + E+ Y I T P+V IP S++ ++ I Sbjct: 286 VVNEGRSIVIVVNKWDLVKESEKEAFQEEFYYQIN---THLPQVKGIPVLFISAINKQNI 342 Query: 200 EVLRKAILE 208 E + A L+ Sbjct: 343 EQVLDACLK 351 >gi|5257286|gb|AAD41267.1| unknown [Zea mays] Length = 444 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K T + PG+T+H + + + L D Sbjct: 162 VGFVGYPNVGKSSTINALVGEKRTGVT-HTPGKTKHFQTLIISE---------ELTLCDC 211 Query: 92 PG 93 PG Sbjct: 212 PG 213 >gi|24372195|ref|NP_716237.1| GTP-binding protein HflX [Shewanella oneidensis MR-1] gi|24346104|gb|AAN53682.1|AE015507_8 GTP-binding protein HflX [Shewanella oneidensis MR-1] Length = 435 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 30/191 (15%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ P ++ G +N GKS+L N L +S+ Q F D + K +LP Sbjct: 194 RSDMPTVSLVGYTNAGKSTLFNALT-------SSDVYAADQ---LFATLDPTLRKLDLPD 243 Query: 86 MALVDMPGYGYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH-----GVKQIDQ 139 A++ G+ R P V ++ L E + ++DC +Q+ Q Sbjct: 244 GAVILADTVGFIRHLPHDLVAAFKA----TLQETRQAELLLHIVDCADENMADNFEQV-Q 298 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 V +D V IV KID L T + + +R + +AH KR G Sbjct: 299 SVLKEIDADEVMQLIVCNKIDLLEDVTPRIEYDDRGKPVRVWVSAH---------KRLGF 349 Query: 200 EVLRKAILETI 210 ++L KAI E I Sbjct: 350 DLLLKAITELI 360 >gi|67469055|ref|XP_650519.1| GTP binding protein [Entamoeba histolytica HM-1:IMSS] gi|56467154|gb|EAL45133.1| GTP binding protein, putative [Entamoeba histolytica HM-1:IMSS] Length = 463 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 10/65 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G NVGKSSL+N LV +K + S+ PGRT++L + N + L D Sbjct: 309 VGLIGNPNVGKSSLLNWLVGKK-VTSVSSHPGRTKYLQTY---------NMNKHITLADC 358 Query: 92 PGYGY 96 PG + Sbjct: 359 PGMMF 363 >gi|303239305|ref|ZP_07325833.1| ribosome-associated GTPase EngA [Acetivibrio cellulolyticus CD2] gi|302593091|gb|EFL62811.1| ribosome-associated GTPase EngA [Acetivibrio cellulolyticus CD2] Length = 440 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 18/147 (12%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +PK P +A GR NVGKS+ N L R+ ++ + PG T+ + ++ N K Sbjct: 1 MPK---PVVAIVGRPNVGKSTFFNYLAGRR-ISIVEDTPGVTRD-RIYTEVEWRNRK--- 52 Query: 84 PAMALVDMPGYGYARAPK--KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L+D G K + + S + + T + ++D + G+ D +V Sbjct: 53 --FTLIDTGGIEPYSEDKIMQQMKSQAEIAI------ETANVIVFMVDRKDGLTASDNEV 104 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 + L K +V+ K+D++ A+ Sbjct: 105 ATLLRKSKKPVILVVNKVDRVGELPAE 131 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 13/144 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 ++A G+ N GKSSLIN ++ + S+ PG T+ ++ +V +N + Sbjct: 179 KVAVIGKPNAGKSSLINKVLGEDRVI-VSDIPGTTRDAIDTYV-------ENEEGKFVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G +N++ + + ER+ + C+ ++ID GV + D + + ++ Sbjct: 231 DTAGIRRQSKINENIERYSTIRSWTAIERADV-CL-IMIDAEEGVTEQDTKIAGYAHEQG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEK 173 + +V+ K D + T TLE+ Sbjct: 289 KASIVVVNKWDLVEKNTG--TLEE 310 >gi|170683241|ref|YP_001744300.1| putative GTPase [Escherichia coli SMS-3-5] gi|170520959|gb|ACB19137.1| putative GTPase [Escherichia coli SMS-3-5] Length = 290 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|119494780|ref|ZP_01624785.1| hypothetical protein L8106_17897 [Lyngbya sp. PCC 8106] gi|119451996|gb|EAW33227.1| hypothetical protein L8106_17897 [Lyngbya sp. PCC 8106] Length = 283 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRK-NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 PP++A G+S VGK++ IN L N + + T+ + Q F + + A+ Sbjct: 168 PPKVAVIGKSGVGKTTTINNLFNAEFKTSPTTVGTTKAQIKEFTL--------STGGALT 219 Query: 88 LVDMPGYGYARAPKKNVD 105 +VD+PGYG + A + D Sbjct: 220 VVDLPGYGRSEAEDQEYD 237 >gi|73662832|ref|YP_301613.1| ribosomal biogenesis GTPase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495347|dbj|BAE18668.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 286 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 GL P+A I G NVGKS+LIN L N K++A+T N PG T+ + Sbjct: 115 GLTPRAIRAMIV--GIPNVGKSTLINKLAN-KSIAKTGNTPGVTKQQQWI 161 >gi|107100232|ref|ZP_01364150.1| hypothetical protein PaerPA_01001255 [Pseudomonas aeruginosa PACS2] Length = 302 Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 14 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGEVQAVYVD 65 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 P G ++ +K ++ + + R S V + + R + DQ V + + Sbjct: 66 TP--GLHKSGEKALNRY---MNRTASAALKDVDVVIFVVDRTRWTEEDQMVLERVQYVSC 120 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I + K D++ + L ++L + P A EV+P S+ ++VL K + E + Sbjct: 121 PVLIAVNKTDRIEEKA--DLLPHLEWLTQQLPKA--EVVPISAQHGTNLDVLEKLVAERL 176 >gi|261820689|ref|YP_003258795.1| GTP-binding protein HSR1-related protein [Pectobacterium wasabiae WPP163] gi|261604702|gb|ACX87188.1| GTP-binding protein HSR1-related protein [Pectobacterium wasabiae WPP163] Length = 291 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 15/138 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G++ VGKSSL N L + ++ S++ T+H F L + ++ V Sbjct: 37 PVIGIMGKTGVGKSSLCNALF-QGEVSPVSDSRACTRHALTF------RLSSGQRSILFV 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PG G + + + GL +L + V L+ IDQ ++ + + Sbjct: 90 DLPGVGESEERDHD---YAGLYQHWLPR---VDIVLWLLKADDRALAIDQHIYRTVIGER 143 Query: 150 VSYQI--VLTKIDKLSPT 165 +I VL ++DKL P+ Sbjct: 144 YRDKILFVLNQVDKLEPS 161 >gi|242373536|ref|ZP_04819110.1| possible GTP-binding protein [Staphylococcus epidermidis M23864:W1] gi|242348899|gb|EES40501.1| possible GTP-binding protein [Staphylococcus epidermidis M23864:W1] Length = 309 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 14/75 (18%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSN 78 E GL P+A I G NVGKS+LIN L NR ++A+T N PG T+ + V K Sbjct: 128 EKGLKPRAIRAMIV--GIPNVGKSTLINKLANR-SIAQTGNKPGVTKQQQWIKVGK---- 180 Query: 79 LKNNLPAMALVDMPG 93 ++ L+D PG Sbjct: 181 ------SLQLLDTPG 189 >gi|213581531|ref|ZP_03363357.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 162 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 45 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 46 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 106 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 156 Query: 205 AIL 207 +L Sbjct: 157 HVL 159 >gi|206889400|ref|YP_002249105.1| ferrous iron transport protein B [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741338|gb|ACI20395.1| ferrous iron transport protein B [Thermodesulfovibrio yellowstonii DSM 11347] Length = 636 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 8/63 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IAF G+ N GKS++ N L K + T+N PG+T H S +K +VD Sbjct: 2 KIAFIGQPNAGKSTIFNGLAGYKTV--TANFPGQTVHYT------VSKVKVGNETFEIVD 53 Query: 91 MPG 93 +PG Sbjct: 54 LPG 56 >gi|184159115|ref|YP_001847454.1| GTP-binding protein Era [Acinetobacter baumannii ACICU] gi|183210709|gb|ACC58107.1| GTPase [Acinetobacter baumannii ACICU] Length = 342 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L +ID + Q D V L Sbjct: 95 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDAQKWT-QNDDLVLEKLKNA 146 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 147 DMPVILVINKADTFGDKREILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEK 202 Query: 209 TINY 212 + Y Sbjct: 203 YLPY 206 >gi|194365440|ref|YP_002028050.1| GTP-binding protein EngA [Stenotrophomonas maltophilia R551-3] gi|238693498|sp|B4SSW8|DER_STRM5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|194348244|gb|ACF51367.1| small GTP-binding protein [Stenotrophomonas maltophilia R551-3] Length = 465 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 19/150 (12%) Query: 24 LPKAGPPE----------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 LP+ G E IAF GR NVGKS+L+N ++ + + S+ PG T+ + V Sbjct: 163 LPEEGSGEELDNDPNRIRIAFVGRPNVGKSTLVNRILGEERMI-ASDVPGTTRD-SIAV- 219 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L+ + L+D G + V+ + +V+ + + L++D G Sbjct: 220 ----DLERDGREYRLIDTAGLRRRSRVDEVVEKFS--VVKTMQSIEQCQVAVLMLDATEG 273 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 V D V + + I + K D L+ Sbjct: 274 VTDQDATVLGAVLDAGRALVIAINKWDGLT 303 >gi|332875944|ref|ZP_08443730.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6014059] gi|323519011|gb|ADX93392.1| GTP-binding protein Era [Acinetobacter baumannii TCDC-AB0715] gi|332735810|gb|EGJ66851.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6014059] Length = 340 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 40 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 92 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L +ID + Q D V L Sbjct: 93 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDAQKWT-QNDDLVLEKLKNA 144 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 145 DMPVILVINKADTFGDKREILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEK 200 Query: 209 TINY 212 + Y Sbjct: 201 YLPY 204 >gi|323138582|ref|ZP_08073650.1| ribosome-associated GTPase EngA [Methylocystis sp. ATCC 49242] gi|322396216|gb|EFX98749.1| ribosome-associated GTPase EngA [Methylocystis sp. ATCC 49242] Length = 466 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 78/193 (40%), Gaps = 33/193 (17%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKDFSNLKNNLPAMA 87 P IA GR N GKS+LIN ++ L A + FV +D M Sbjct: 196 PLRIAVVGRPNAGKSTLINRILGEDRLLTGPEAGITRDSIGVDFVWRDRK--------MK 247 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC------VYLLIDCRHGVKQIDQDV 141 L D G R K VD + LS LR V LLID ++ D + Sbjct: 248 LFDTAGL---RKRAKVVDK-----LEKLSAADALRAVRFSEVVVLLIDSTIPFEKQDLTI 299 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETL--EKTKYL---IRNYPTAHPEVIPTSSVKR 196 ++ ++ I L K D + A+ +L E+ + L +R P V+P S Sbjct: 300 ADLAAREGRAFVIALGKWDLIEDRGAKLSLLREEAERLLPQVRGCP-----VVPVSGATG 354 Query: 197 KGIEVLRKAILET 209 +G++ L +AI+ T Sbjct: 355 QGLDRLMEAIVAT 367 >gi|332652769|ref|ZP_08418514.1| ribosome-associated GTPase EngA [Ruminococcaceae bacterium D16] gi|332517915|gb|EGJ47518.1| ribosome-associated GTPase EngA [Ruminococcaceae bacterium D16] Length = 441 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 9/133 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ NVGKSSL+N ++ ++ + SN G T+ V F N K +D Sbjct: 178 KVAIIGKPNVGKSSLVNRILGQERVI-VSNMAGTTRDA---VDSVFENEKGKF---LFID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + L ERS + C+ +LID + GV + D V + Sbjct: 231 TAGMRKKSKVDDRIEKFSVLRATMAIERSDV-CL-ILIDAQEGVTEQDTKVAGLAHEAGK 288 Query: 151 SYQIVLTKIDKLS 163 + IV+ K D + Sbjct: 289 ACIIVVNKWDAIE 301 >gi|156048182|ref|XP_001590058.1| hypothetical protein SS1G_08822 [Sclerotinia sclerotiorum 1980] gi|154693219|gb|EDN92957.1| hypothetical protein SS1G_08822 [Sclerotinia sclerotiorum 1980 UF-70] Length = 661 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 13 IFLRGVPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +FL PEI P +I G NVGKSS IN L+ K ++ S+ PG+T+H Sbjct: 340 LFLLHAPEIQDSESEHPRKTQIGLVGYPNVGKSSTINALIGAKKVS-VSSTPGKTKHFQ 397 >gi|186682120|ref|YP_001865316.1| GTP-binding protein EngA [Nostoc punctiforme PCC 73102] gi|238691263|sp|B2J1L2|DER_NOSP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|186464572|gb|ACC80373.1| small GTP-binding protein [Nostoc punctiforme PCC 73102] Length = 456 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 20/165 (12%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDF 76 +P + +P+ ++A GR NVGKSSL+N V + A S G T+ ++ + +D Sbjct: 165 IPAVEDIPETNEIKVAIVGRPNVGKSSLLNAFVGEER-AIVSPISGTTRDAIDTVIERDG 223 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + L+D G + + + + I R V L++D GV + Sbjct: 224 QTYR-------LIDTAGIRKKKHIEYGTEFFS--INRAFKAIRRADVVLLVLDAVDGVTE 274 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 DQ + + ++ + IV+ K D +EK Y I +Y Sbjct: 275 QDQKLAGRIIEEGRACIIVVNKWD---------AVEKDSYTIYDY 310 >gi|330504675|ref|YP_004381544.1| GTP-binding protein EngA [Pseudomonas mendocina NK-01] gi|328918961|gb|AEB59792.1| GTP-binding protein EngA [Pseudomonas mendocina NK-01] Length = 492 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 16/184 (8%) Query: 28 GPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 GP E +A GR NVGKS+L+N ++ + + A T + ++P + + K Sbjct: 190 GPSEKDGIKLAIIGRPNVGKSTLVNRMLGEERVIVYDQAG--TTRDSIYIPFERDDEKYT 247 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L A V G + K +V V+ L V ++D R GV D ++ Sbjct: 248 LIDTAGVRRRGKIFEAVEKFSV-------VKTLQAIQDSNVVVFVMDAREGVVDHDLNLL 300 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 F+ + + I L K D + Q+ KT+ R + ++ S++ G+ L Sbjct: 301 GFVLESGRALVIALNKWDGMD--QGQKDYVKTELERRLFFVDFADIHFISALHGTGVGHL 358 Query: 203 RKAI 206 K++ Sbjct: 359 YKSV 362 >gi|328350248|emb|CCA36648.1| Large subunit GTPase 1 homolog [Pichia pastoris CBS 7435] Length = 704 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 13/84 (15%) Query: 13 IFLRGVPEIGLLPKAGPPE---IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + LR P P G + I G NVGKSS IN LV K ++ S+ PG+T+H Sbjct: 385 LLLRAAPGPLTEPLEGQTQRLQIGLVGYPNVGKSSTINALVGSKKVS-VSSTPGKTKHFQ 443 Query: 70 FFVPKDFSNLKNNLPAMALVDMPG 93 + D ++ L D PG Sbjct: 444 TILLSD---------SVILCDCPG 458 >gi|222632589|gb|EEE64721.1| hypothetical protein OsJ_19577 [Oryza sativa Japonica Group] Length = 423 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 24/181 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G+ NVGKS+LIN +V +K L+ ++ P T+H L ++ + L Sbjct: 128 VAVLGKPNVGKSTLINQIVGQK-LSIVTDKPQTTRHRILGICSEPEYQ--------IILY 178 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG KK + ++++ + S + CV +++D ++ID+ + + K Sbjct: 179 DTPG-----VIKKEMHKLDTMMMKNVRSAVGSADCVLVVVDACKMPEKIDEILEEGVGNK 233 Query: 149 AVSYQI--VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + VL K D + P + LE + T +VIP S+ G++ +++ I Sbjct: 234 DTELPVLLVLNKKDLIKPGEIAKKLEWYQKF-----TNADDVIPISAKFGHGVDDIKEWI 288 Query: 207 L 207 L Sbjct: 289 L 289 >gi|125553352|gb|EAY99061.1| hypothetical protein OsI_21018 [Oryza sativa Indica Group] Length = 423 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 24/181 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G+ NVGKS+LIN +V +K L+ ++ P T+H L ++ + L Sbjct: 128 VAVLGKPNVGKSTLINQIVGQK-LSIVTDKPQTTRHRILGICSEPEYQ--------IILY 178 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG KK + ++++ + S + CV +++D ++ID+ + + K Sbjct: 179 DTPG-----VIKKEMHKLDTMMMKNVRSAVGSADCVLVVVDACKMPEKIDEILEEGVGNK 233 Query: 149 AVSYQI--VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + VL K D + P + LE + T +VIP S+ G++ +++ I Sbjct: 234 DTELPVLLVLNKKDLIKPGEIAKKLEWYQKF-----TNADDVIPISAKFGHGVDDIKEWI 288 Query: 207 L 207 L Sbjct: 289 L 289 >gi|118618892|ref|YP_907224.1| GTP-binding protein Era [Mycobacterium ulcerans Agy99] gi|118571002|gb|ABL05753.1| GTP-binding protein Era [Mycobacterium ulcerans Agy99] Length = 300 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 20/182 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 + GR N GKS+L N LV K +A TS P T+H + V ++ + LVD Sbjct: 10 VCLVGRPNTGKSTLTNALVGTK-VAITSMRPQTTRHTIRGIVHRESFQI-------ILVD 61 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA- 149 PG P+ + +VR S + + L I + D+ + + A Sbjct: 62 TPGL---HRPRTLLGKRLNDLVR--DTYSEVDVIGLCIPADESIGPGDRWIIEQIAATAP 116 Query: 150 -VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V +++TKIDK+ L L+ N E++P S+V +EVL + Sbjct: 117 KVKLVVIVTKIDKVPKDQVAAQLVAVSELVTN----SAEIVPVSAVTGAQVEVLIDVLAR 172 Query: 209 TI 210 T+ Sbjct: 173 TL 174 >gi|116618390|ref|YP_818761.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271410|sp|Q03WN4|DER_LEUMM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|116097237|gb|ABJ62388.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 436 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 12/150 (8%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSS++N ++ K + S+ G T+ D + +V Sbjct: 175 IRFSIIGRPNVGKSSIVNAMLGEKRVI-VSDIEGTTRD-----AIDTRFVTEEGDEFVMV 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G +N + + ++R + + ++ID G+++ D+ V F + Sbjct: 229 DTAGMRKRGKIYENTEKYS--VMRAMKAIDDSNVILMVIDAEAGIREQDKHVAGFAHEAG 286 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + IV+ K D + T+ + LIR Sbjct: 287 RAMIIVVNKWDAIEKN--DRTMSDFENLIR 314 >gi|296474265|gb|DAA16380.1| guanine nucleotide binding protein-like 1 [Bos taurus] Length = 480 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK ++ S PG T++ +F+ P Sbjct: 357 KDGVATIGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TP 405 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 406 SVKLCDCPG 414 >gi|295692881|ref|YP_003601491.1| GTP-binding protein enga [Lactobacillus crispatus ST1] gi|295030987|emb|CBL50466.1| GTP-binding protein engA [Lactobacillus crispatus ST1] Length = 435 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 13/142 (9%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I+FS GR NVGKSS++N L+ + +N G T+ P +K + A + Sbjct: 175 ISFSVIGRPNVGKSSIVNKLLGEDRVI-VANEEGTTRDA-VDTPFTHDGVKFKVVDTAGI 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G Y + K +V +R +S V L+ID G+++ D+ V + + Sbjct: 233 RRRGKVYEKTEKYSV-------MRAMSAIERSDVVLLVIDASTGIREQDKHVAGYAHEAG 285 Query: 150 VSYQIVLTKID--KLSPTTAQE 169 IV+ K D K + T+A+E Sbjct: 286 RGIIIVVNKWDLPKKNSTSAKE 307 Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A G+ NVGKS+L N ++N++ LA + PG T+ N+ Sbjct: 4 PVVAIVGQPNVGKSTLFNRIINQR-LAIVEDKPGVTRDRNY 43 >gi|183983654|ref|YP_001851945.1| GTP-binding protein Era [Mycobacterium marinum M] gi|183176980|gb|ACC42090.1| GTP-binding protein Era [Mycobacterium marinum M] Length = 300 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 20/182 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 + GR N GKS+L N LV K +A TS P T+H + V ++ + LVD Sbjct: 10 VCLVGRPNTGKSTLTNALVGTK-VAITSMRPQTTRHTIRGIVHRESFQI-------ILVD 61 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA- 149 PG P+ + +VR S + + L I + D+ + + A Sbjct: 62 TPGL---HRPRTLLGKRLNDLVR--DTYSEVDVIGLCIPADESIGPGDRWIIEQIAATAP 116 Query: 150 -VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V +++TKIDK+ L L+ N E++P S+V +EVL + Sbjct: 117 KVKLVVIVTKIDKVPKDQVAAQLVAVSELVTN----SAEIVPVSAVTGAQVEVLIDVLAR 172 Query: 209 TI 210 T+ Sbjct: 173 TL 174 >gi|78217514|gb|ABB36863.1| GTP-binding protein EngA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 475 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 21/141 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMAL 88 P+IA GR NVGKS+L N L+ R N A T + PG T+ + +V K + Sbjct: 23 PKIALIGRPNVGKSTLFNRLI-RSNRAITHDRPGVTRDRMEGYV-------KVGDRKFII 74 Query: 89 VDMPGY------GYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQ 139 +D G A P + + + I+R E S C L++D R G+ D+ Sbjct: 75 IDTGGITLDEHAAVAEGPDE-LRGFEAEILRQTEEAIADSVALC--LVVDGREGLTPFDE 131 Query: 140 DVFSFLDKKAVSYQIVLTKID 160 + +++ K + + K+D Sbjct: 132 SLAAYVRKSGKPVLLAVNKVD 152 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 9/132 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR N GKSSL+N L + + S+ G T +D ++ L Sbjct: 208 PLKLAMLGRPNAGKSSLVNALSGSRRMI-VSDVAGTT--------RDSVDIAVELGGRRY 258 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 V + G R K + L + +++D G+ Q D+ + LD++ Sbjct: 259 VFVDTAGVRRRAKIQDPVERYSVNSSLKSTTKADVTLVVLDAVEGLTQQDKRLIDLLDER 318 Query: 149 AVSYQIVLTKID 160 + +V+ KID Sbjct: 319 KTPFMLVINKID 330 >gi|41017011|sp|Q7URJ8|DER_RHOBA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|327537179|gb|EGF23928.1| small GTP-binding protein [Rhodopirellula baltica WH47] Length = 454 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 13/117 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A GR NVGKSSL N L R+ LA N G T+ + + ++++ L+ Sbjct: 4 PQVAIVGRPNVGKSSLFNWLA-RRRLAIVDNFEGVTRD------RMTTLIESDDQFFELI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFL 145 D G G ++ D + R + ++ + L++D + G+ +D++V L Sbjct: 57 DTGGMGV-----EDADDLTSDVRRQIDMAIASADVILLVVDVQTGLMPLDEEVVERL 108 >gi|301330436|ref|ZP_07223060.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|300843591|gb|EFK71351.1| conserved hypothetical protein [Escherichia coli MS 78-1] Length = 309 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 56 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 108 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 109 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 162 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 163 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSART 221 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 222 GWELDTLVSALMTAL 236 >gi|158522145|ref|YP_001530015.1| small GTP-binding protein [Desulfococcus oleovorans Hxd3] gi|226741135|sp|A8ZU05|DER_DESOH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|158510971|gb|ABW67938.1| small GTP-binding protein [Desulfococcus oleovorans Hxd3] Length = 458 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 15/133 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N L +N A + PG T+ + + +++ N +LV Sbjct: 3 PVVVILGRPNVGKSTLFNRLTRTQN-ALVDDMPGVTRD------RLYGDVEWNGVFFSLV 55 Query: 90 DMPGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D G+ G ++ S I R + E V L+ D + G+ D++ +FL Sbjct: 56 DTGGFLSGDDDFFMPHIQSQ---IHRAIDEAD---AVLLVFDGKSGISPFDREAMAFLQS 109 Query: 148 KAVSYQIVLTKID 160 + ++ KID Sbjct: 110 ASCPVFYLVNKID 122 >gi|159037544|ref|YP_001536797.1| small GTP-binding protein [Salinispora arenicola CNS-205] gi|189037157|sp|A8LYU3|DER_SALAI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157916379|gb|ABV97806.1| small GTP-binding protein [Salinispora arenicola CNS-205] Length = 467 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 9/86 (10%) Query: 10 SAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 + W+ L VPE GP P +A GR NVGKS+L+N L+ R+ A + PG T+ Sbjct: 5 NGWVEL-DVPEPDAEEFTGPQPVVAVVGRPNVGKSTLVNRLIGRRQ-AVVEDVPGVTRDR 62 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGY 94 VP D + N A+VD G+ Sbjct: 63 ---VPYD---AQWNGRQFAVVDTGGW 82 >gi|220930844|ref|YP_002507753.1| tRNA modification GTPase TrmE [Clostridium cellulolyticum H10] gi|220001172|gb|ACL77773.1| tRNA modification GTPase TrmE [Clostridium cellulolyticum H10] Length = 460 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 25/207 (12%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 ++ + I K I L G E G + + G +I +G+ NVGKSSL+N L A ++ Sbjct: 194 VLENLIKIKEELITLAGTFERGKILREGI-DIVIAGKPNVGKSSLLNQLSGSTK-AIVTD 251 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG T+ + +++ N+K +PA ++D G R+ + V++ G + R + Sbjct: 252 IPGTTRD----IIEEYVNIK-GIPA-KIIDTAGI---RSTEDVVETIG--VNRAYEAIES 300 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + ++ GV + D + + +KK++ I++ K D + + + I+ Sbjct: 301 ADLIIAVLSADTGVTEEDIQILKMIKNKKSL---ILINKTDLVEKNSISK--------IK 349 Query: 180 NYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + V+ S +K GIE L AI Sbjct: 350 QQLSECDIVLEASVIKDVGIEELETAI 376 >gi|95930678|ref|ZP_01313412.1| GTP-binding protein Era [Desulfuromonas acetoxidans DSM 684] gi|95133330|gb|EAT14995.1| GTP-binding protein Era [Desulfuromonas acetoxidans DSM 684] Length = 303 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 37/189 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ +K +A T+N P T++ + + ++N + L D Sbjct: 16 VSIVGRPNVGKSTLLNQILGQK-IAITANKPQTTRNRILGI-----HSEDNAQVLFL-DT 68 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFSFLD 146 PG A G + +Y+ +++ C V L++ V D + L Sbjct: 69 PGIHKAT----------GKLNQYMVDQALSACRGVDVVVFLVEATDRVGGGDDFILDVLA 118 Query: 147 KKAVSYQIVLTKI-----DKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + + +V+ K+ DKL P AQ E+ + E+IP S++ G+E Sbjct: 119 QSDIPVVLVINKVDLVEKDKLLPLIAQYA-ERFDF---------KEIIPLSALNGSGVER 168 Query: 202 LRKAILETI 210 L ++ + + Sbjct: 169 LVASVRDML 177 >gi|327286346|ref|XP_003227891.1| PREDICTED: large subunit GTPase 1 homolog [Anolis carolinensis] Length = 690 Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 10/91 (10%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 SH + + R V E + G + G NVGKSS IN ++ +K ++ S P Sbjct: 389 SHLVQREELLQVFRSVHEGKRTIRDGEVTVGLVGYPNVGKSSTINTILGKKKVS-VSATP 447 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 G T+H + P + L D PG Sbjct: 448 GHTKHFQTLYVE---------PGLCLCDCPG 469 >gi|282855425|ref|ZP_06264746.1| ribosome-associated GTPase EngA [Pyramidobacter piscolens W5455] gi|282586721|gb|EFB91968.1| ribosome-associated GTPase EngA [Pyramidobacter piscolens W5455] Length = 443 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 13/172 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G +A GR NVGKSS++N L + + S+ PG T+ V L+ Sbjct: 171 PEEGVISVALVGRPNVGKSSILNALTGSQR-SLVSDIPGTTRDSIDAV------LEYKGE 223 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +VD G K +++ + VR + ++D R + DQ + Sbjct: 224 RFRIVDTAGLRRKSRVKDDIEFYS--TVRTMDAVDQCDVAIFVMDVRELATEQDQRLVGE 281 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + + +V+ K D L +P T E K + R +H V+ TS+V Sbjct: 282 ILARGKGVVLVVNKWDLLPNTPETGDEVNGKLREEFRF--ASHAPVLFTSAV 331 >gi|145253661|ref|XP_001398343.1| large subunit GTPase 1 [Aspergillus niger CBS 513.88] gi|134083912|emb|CAK48816.1| unnamed protein product [Aspergillus niger] Length = 664 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 20/89 (22%) Query: 13 IFLRGVPEIGLLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +FL PE LP PE I G NVGKSS IN L+ K ++ S PG+ Sbjct: 332 LFLSNTPET--LPDNDSPEGPVKKKTTIGLVGYPNVGKSSTINALLGAKKVS-VSATPGK 388 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 T+H P + L D PG Sbjct: 389 TKHFQTLYLS---------PEIMLCDCPG 408 >gi|321253507|ref|XP_003192756.1| cytokinesis-related protein [Cryptococcus gattii WM276] gi|317459225|gb|ADV20969.1| Cytokinesis-related protein, putative [Cryptococcus gattii WM276] Length = 380 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 42/187 (22%) Query: 36 GRSNVGKSSLINILVN---------RKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 G+S +GK++LIN L R+ A+ + + L + + N+K + Sbjct: 31 GQSGLGKTTLINTLFATEICSPRNYRQRFAKQLDKTTEVEILKADLEERGFNIK-----L 85 Query: 87 ALVDMPGYG-YARAPKKNVDSWGGLI----------VR-----YLSERSTLR---CVYLL 127 +++D PG+G Y N DSWG ++ +R + E+ LR C+Y + Sbjct: 86 SVIDTPGFGDYV----NNRDSWGPIVDFIDDQHESYMRQEQQPFRKEKQDLRIHACLYFI 141 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +K +D ++ L + V+ V+ K D ++P E L+K K ++R TA Sbjct: 142 KPTGTTLKPLDVEIMKKLGTR-VNLIPVIAKADTMTP----EDLQKFKTIVRETVTAQNI 196 Query: 188 VIPTSSV 194 I T V Sbjct: 197 AIYTPPV 203 >gi|254565445|ref|XP_002489833.1| Putative GTPase involved in 60S ribosomal subunit biogenesis [Pichia pastoris GS115] gi|238029629|emb|CAY67552.1| Putative GTPase involved in 60S ribosomal subunit biogenesis [Pichia pastoris GS115] Length = 667 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 13/84 (15%) Query: 13 IFLRGVPEIGLLPKAGPPE---IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + LR P P G + I G NVGKSS IN LV K ++ S+ PG+T+H Sbjct: 348 LLLRAAPGPLTEPLEGQTQRLQIGLVGYPNVGKSSTINALVGSKKVS-VSSTPGKTKHFQ 406 Query: 70 FFVPKDFSNLKNNLPAMALVDMPG 93 + D ++ L D PG Sbjct: 407 TILLSD---------SVILCDCPG 421 >gi|57545656|gb|AAW51747.1| Aec64 [Escherichia coli] gi|291291738|gb|ADD91709.1| YeeP [Escherichia coli] Length = 303 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 50 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 102 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 103 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 156 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 157 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSART 215 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 216 GWELDTLVSALMTAL 230 >gi|157154877|ref|YP_001465819.1| putative GTPase [Escherichia coli E24377A] gi|157076907|gb|ABV16615.1| putative GTPase [Escherichia coli E24377A] Length = 290 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMIIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHP-VVAVSACT 202 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 203 GWELDTLVSALMTAL 217 >gi|313672925|ref|YP_004051036.1| gtp-binding protein era [Calditerrivibrio nitroreducens DSM 19672] gi|312939681|gb|ADR18873.1| GTP-binding protein Era [Calditerrivibrio nitroreducens DSM 19672] Length = 294 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 23/174 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPG--RTQHLNFFVPKDFSNLKNNLPAMALV 89 + GR N GKS+L+N ++ K ++ S+ P RTQ + KD + + Sbjct: 8 VGIIGRPNAGKSTLLNAILGEK-VSIISSKPNTTRTQIRGIYNSKD--------AQIIFI 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG A+ D+ L+V E + VY L++ + + + + Sbjct: 59 DTPGIHNAK------DNINKLMVEKAFETIKMVDIVYFLVEPGEKKGPEYKQILELIKNE 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +++TKID +T K + +Y +VIP SS+K+ I+ L Sbjct: 113 PIKKFLIITKIDAFEKKIIYDT---AKQVFNDY--QFDQVIPISSIKKINIDKL 161 >gi|309702300|emb|CBJ01620.1| putative ATP/GTP-binding protein [Escherichia coli ETEC H10407] Length = 290 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMIIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHP-VVAVSACT 202 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 203 GWELDTLVSALMTAL 217 >gi|299769158|ref|YP_003731184.1| GTP-binding protein Era [Acinetobacter sp. DR1] gi|298699246|gb|ADI89811.1| GTP-binding protein Era [Acinetobacter sp. DR1] Length = 342 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 20/183 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK--QIDQDVFSFLDKKA 149 PG KK V + ++ R + S LR V L++ K Q D V L Sbjct: 95 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDAYKWTQNDDLVLEKLKNAE 147 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 148 MPVILVINKADTFEDKRDILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEKY 203 Query: 210 INY 212 + Y Sbjct: 204 LPY 206 >gi|260856464|ref|YP_003230355.1| hypothetical protein ECO26_3414 [Escherichia coli O26:H11 str. 11368] gi|257755113|dbj|BAI26615.1| hypothetical protein ECO26_3414 [Escherichia coli O26:H11 str. 11368] Length = 358 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 105 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 157 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 158 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 211 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 212 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSART 270 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 271 GWELDTLVSALMTAL 285 >gi|261416631|ref|YP_003250314.1| ribosome-associated GTPase EngA [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373087|gb|ACX75832.1| ribosome-associated GTPase EngA [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326129|gb|ADL25330.1| ribosome-associated GTPase EngA [Fibrobacter succinogenes subsp. succinogenes S85] Length = 475 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 17/172 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPA 85 P A GR N GKS+L+N L+N ++ A S+ PG T+ +F V + Sbjct: 178 PVRFAILGRPNAGKSTLLNRLLN-EDRAVVSDIPGTTRDSIDCDFVV---------DGQK 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + D G + V+ + + RS L L++DC G++ D + + + Sbjct: 228 FVVTDTAGLRKKARVEDEVEVFSNMRTLESIRRSDLSV--LVVDCTRGMEIQDYRIITEI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 K +VL K D L + K L+ P E +P S+ K Sbjct: 286 RKAGKGLVVVLNKWDILPNKNDKSFDHMVKELLEREPML--EFVPILSISAK 335 >gi|188587519|ref|YP_001919064.1| tRNA modification GTPase TrmE [Natranaerobius thermophilus JW/NM-WN-LF] gi|205415781|sp|B2A470|MNME_NATTJ RecName: Full=tRNA modification GTPase mnmE gi|179352206|gb|ACB86476.1| tRNA modification GTPase TrmE [Natranaerobius thermophilus JW/NM-WN-LF] Length = 458 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 23/175 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N+L+ + A + PG T+ V ++ NLK +P + ++D G Sbjct: 227 GRPNVGKSSLLNLLLGEER-AIVTEIPGTTRD----VLEEVINLK-GIP-LRIIDTAGI- 278 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R E++ + + ++ID + Q D+ + + K + +V Sbjct: 279 --RESEDKVEQIGVKRTRDSMEQADI--ILVVIDSSQELSQEDKQILTMAQDK--TSLLV 332 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 L K D + +++ L+ P + S++K +G++ L + I E + Sbjct: 333 LNKTD----LHEKLDIDEIDKLVSQIPK-----VRISALKEEGLDKLEEHISELV 378 >gi|191167163|ref|ZP_03028983.1| putative GTPase [Escherichia coli B7A] gi|293402935|ref|ZP_06647032.1| yeeP protein [Escherichia coli FVEC1412] gi|298378463|ref|ZP_06988347.1| yeeP protein [Escherichia coli FVEC1302] gi|312966004|ref|ZP_07780230.1| uncharacterized protein yfjP [Escherichia coli 2362-75] gi|190902820|gb|EDV62549.1| putative GTPase [Escherichia coli B7A] gi|291429850|gb|EFF02864.1| yeeP protein [Escherichia coli FVEC1412] gi|298280797|gb|EFI22298.1| yeeP protein [Escherichia coli FVEC1302] gi|312289247|gb|EFR17141.1| uncharacterized protein yfjP [Escherichia coli 2362-75] gi|323950630|gb|EGB46508.1| hypothetical protein ERKG_02958 [Escherichia coli H252] Length = 290 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|118580147|ref|YP_901397.1| GTP-binding protein EngA [Pelobacter propionicus DSM 2379] gi|171704446|sp|A1APR9|DER_PELPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|118502857|gb|ABK99339.1| small GTP-binding protein [Pelobacter propionicus DSM 2379] Length = 448 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 23/146 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L+ + A + PG T+ N+ + F L+ Sbjct: 3 PLVALVGRPNVGKSTLFNRLLGHRR-AIVDDTPGVTRDRNYALINRFEK------PFILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G+ + +++ + E+S+L + ++D R G+ D +V + Sbjct: 56 DTGGFEPVTEDR---------LLQQMREQSSLAMEEADVIIFMMDARSGLTPADVEVANM 106 Query: 145 LDKKAVSYQIVLTKID--KLSPTTAQ 168 L + V+ K+D KL +A+ Sbjct: 107 LRRVKKPVMYVVNKVDGEKLENDSAE 132 >gi|297544868|ref|YP_003677170.1| ribosome-associated GTPase EngA [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842643|gb|ADH61159.1| ribosome-associated GTPase EngA [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 439 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 9/148 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ +P+ GL +IA GR NVGKSSL+N ++ + + S+ PG T+ + Sbjct: 162 VKKLPQEGLEYSEETIKIAVIGRPNVGKSSLVNKILGEERVI-VSDIPGTTRDA---IDT 217 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 FS N L+D G ++++ + L ERS + C+ L+ID G Sbjct: 218 PFSKDGKN---YVLIDTAGIRRKSRISESIERYSVLRALTAIERSDI-CL-LMIDAIEGP 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 + D + + + IV+ K D + Sbjct: 273 AEQDTKIAGYAFENGKGIIIVVNKWDAI 300 >gi|78189608|ref|YP_379946.1| GTP-binding protein EngA [Chlorobium chlorochromatii CaD3] gi|123743429|sp|Q3AQ22|DER_CHLCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78171807|gb|ABB28903.1| Small GTP-binding protein domain [Chlorobium chlorochromatii CaD3] Length = 443 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 13/131 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSS +N L+ N SN PG T+ S L N L+D Sbjct: 180 LAIVGRPNVGKSSFVNALLG-TNRHIVSNIPGTTRD------AIDSRLMRNQQEYLLIDT 232 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDKKA 149 G ++ + L SER+ RC +++D G+++ D + + ++ Sbjct: 233 AGLRKRTKIDAGIEYYSSL----RSERAIERCEVAIVMLDAEQGIEKQDLKIINMAIERK 288 Query: 150 VSYQIVLTKID 160 +++ K D Sbjct: 289 KGVLLLVNKWD 299 >gi|310642491|ref|YP_003947249.1| gtpase with domain [Paenibacillus polymyxa SC2] gi|309247441|gb|ADO57008.1| Predicted GTPase with uncharacterized domain [Paenibacillus polymyxa SC2] Length = 417 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 77/192 (40%), Gaps = 32/192 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P I GR N GKSS++N L + A + G T F P + LP Sbjct: 7 PRSNRPHIVLLGRRNAGKSSILNTLTGQP--AAVVSPIGGTTTDPVFKPMEL------LP 58 Query: 85 A--MALVDMPGY---GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 A + LVD G G ++N + L ++ L+ID GV + Sbjct: 59 AGPIVLVDTAGLDDEGEIGELRRN---------KTLEILNSTDLALLVIDATVGVGPFEH 109 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ L K + VL KID L+ + TL L +IP S+ +G Sbjct: 110 ELLEKLRTKKIPVIGVLNKIDTLAESDPMAATLGNELNLT---------LIPFSAAMLRG 160 Query: 199 IEVLRKAILETI 210 L+KAI T+ Sbjct: 161 DTELKKAITNTL 172 >gi|295674741|ref|XP_002797916.1| large-subunit GTPase [Paracoccidioides brasiliensis Pb01] gi|226280566|gb|EEH36132.1| large-subunit GTPase [Paracoccidioides brasiliensis Pb01] Length = 700 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 14/85 (16%) Query: 13 IFLRGVPEI----GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +FL P I G K+ P I G NVGKSS IN L+ K ++ S PG+T+H Sbjct: 341 LFLTAAPNIKPKDGDKGKSKPITIGLVGYPNVGKSSTINALLGAKKVS-VSATPGKTKHF 399 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPG 93 P + L D PG Sbjct: 400 QTLYLS---------PNLLLCDCPG 415 >gi|207743439|ref|YP_002259831.1| gtp-binding protein enga (partial sequence c terminus) [Ralstonia solanacearum IPO1609] gi|206594836|emb|CAQ61763.1| putative gtp-binding protein enga (partial sequence c terminus) [Ralstonia solanacearum IPO1609] Length = 363 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 17/178 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + DF +N P L+D Sbjct: 99 IAIVGRPNVGKSTLVNALIGEERVI-AFDMPGTTRDAIYV---DFE--RNGKP-YTLIDT 151 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D + + D + F+ + + Sbjct: 152 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRA 209 Query: 152 YQIVLTKIDKL---SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + K D L + + LE+ + A V S+ +R GI L K++ Sbjct: 210 LVIGVNKWDGLDGHARDRIKHDLERKLQFL-----AFANVHYISAKQRTGIGALMKSV 262 >gi|282848929|ref|ZP_06258319.1| ribosome-associated GTPase EngA [Veillonella parvula ATCC 17745] gi|282581434|gb|EFB86827.1| ribosome-associated GTPase EngA [Veillonella parvula ATCC 17745] Length = 444 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN++ ++ + PG T+ +F D L ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKR-ISIVEDIPGVTRDRIYF---DAEWLNREF---TMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L E + + ++D + G+ D++V + L Sbjct: 57 DTGGIEFITENSHVIPKMMRLQAELAIEEAD--VILFVVDGKQGIVPADEEVANILRASG 114 Query: 150 VSYQIVLTKIDKLS 163 +V+ KID ++ Sbjct: 115 KPVVLVVNKIDSVN 128 Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 9/129 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N L+ + + + A ++ + + N K L+D Sbjct: 181 VAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTYWTHE--NQK-----FVLIDT 233 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ V+ + IVR L V L++D + GV + D+ + + + Sbjct: 234 AGMRRKSKIEEAVERYS--IVRSLRSVDRADIVVLVLDAQDGVTEQDKKIAGYAYEAGKG 291 Query: 152 YQIVLTKID 160 IV+ K D Sbjct: 292 VVIVVNKWD 300 >gi|227431693|ref|ZP_03913723.1| GTP-binding protein EngA [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352517|gb|EEJ42713.1| GTP-binding protein EngA [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 436 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 12/150 (8%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSS++N ++ K + S+ G T+ D + +V Sbjct: 175 IRFSIIGRPNVGKSSIVNAMLGEKRVI-VSDIEGTTRD-----AIDTRFVTEEGDEFVMV 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G +N + + ++R + + ++ID G+++ D+ V F + Sbjct: 229 DTAGMRKRGKIYENTEKYS--VMRAMKAIDDSNVILMVIDAEAGIREQDKHVAGFAHEAG 286 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + IV+ K D + T+ + LIR Sbjct: 287 RAMIIVVNKWDAIEKN--DRTMSDFENLIR 314 >gi|123967744|ref|YP_001008602.1| tRNA modification GTPase TrmE [Prochlorococcus marinus str. AS9601] gi|166234808|sp|A2BNY4|MNME_PROMS RecName: Full=tRNA modification GTPase mnmE gi|123197854|gb|ABM69495.1| putative thiophen / furan oxidation protein [Prochlorococcus marinus str. AS9601] Length = 460 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 16/80 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAMAL 88 IA G++NVGKSSL+N+L +K A +N PG T+ +N + N++P M + Sbjct: 230 IALIGKTNVGKSSLLNLLA-KKEKAIVTNIPGTTRDVIEVNLTI--------NDIP-MKI 279 Query: 89 VDMPGYGYARAPKKNVDSWG 108 +D G R + ++S G Sbjct: 280 IDTAGI---RETHEQIESIG 296 >gi|157961137|ref|YP_001501171.1| GTP-binding protein EngA [Shewanella pealeana ATCC 700345] gi|189037162|sp|A8H249|DER_SHEPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157846137|gb|ABV86636.1| small GTP-binding protein [Shewanella pealeana ATCC 700345] Length = 490 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ L Sbjct: 199 PIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRD-SIYIP-----MERQGREYVL 251 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L+ID R G+ + D + F+ Sbjct: 252 IDTAGVRRRSKVHETVEKFS--VIKTLKAVEDSNVVLLVIDAREGIAEQDLGLLGFVLNA 309 Query: 149 AVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 310 GRALVIAINKWDGID 324 >gi|115749159|ref|XP_794655.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115953718|ref|XP_001177857.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 676 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 + G NVGKSS IN L+ K + S PGRT+H FV P + L D Sbjct: 403 VGMVGYPNVGKSSTINALLREKKVP-VSATPGRTKHFQTLFVE----------PTLCLCD 451 Query: 91 MPG 93 PG Sbjct: 452 CPG 454 >gi|87306807|ref|ZP_01088953.1| probable GTP-binding protein [Blastopirellula marina DSM 3645] gi|87290180|gb|EAQ82068.1| probable GTP-binding protein [Blastopirellula marina DSM 3645] Length = 473 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 13/113 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+I GR NVGKSSL N L R+ LA N G T+ ++ ++ +V Sbjct: 4 PQIVIVGRPNVGKSSLFNWLAGRR-LAIVDNVAGVTRDRMTYL------MQWRERYFEIV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDV 141 D G G +VD I + ++ + + ++D R G+ +DQ+V Sbjct: 57 DTGGIGV-----NDVDDLTDEIEQQIAIAIDSADLILFVVDTREGILPLDQEV 104 >gi|322375706|ref|ZP_08050218.1| ribosome-associated GTPase EngA [Streptococcus sp. C300] gi|321279414|gb|EFX56455.1| ribosome-associated GTPase EngA [Streptococcus sp. C300] Length = 436 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 19/160 (11%) Query: 24 LPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 + + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 167 VEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDG 222 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 ++D G + +N + + + +RS + V ++++ G+++ D+ + Sbjct: 223 Q--EFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRI 278 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TL+K + ++N+ Sbjct: 279 AGFAHEAGKGMIIVVNKWD---------TLDKDNHTMKNW 309 >gi|326772595|ref|ZP_08231879.1| ferrous iron transport protein B [Actinomyces viscosus C505] gi|326637227|gb|EGE38129.1| ferrous iron transport protein B [Actinomyces viscosus C505] Length = 709 Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 9/74 (12%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 AG P IA +G N GK+S+ N L A+T N PG T V + K + Sbjct: 38 AGAPRIALAGAPNAGKTSIYNALTGLH--AKTGNYPGVT------VQRSMGTCKVGGKTL 89 Query: 87 ALVDMPGYGYARAP 100 + D+PG Y+ P Sbjct: 90 TIEDLPG-AYSLDP 102 >gi|294793788|ref|ZP_06758925.1| GTP-binding protein Era [Veillonella sp. 3_1_44] gi|294455358|gb|EFG23730.1| GTP-binding protein Era [Veillonella sp. 3_1_44] Length = 307 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ K +A S+ T++ V D S + +D Sbjct: 20 VAVVGRPNVGKSTLINALIGDK-IAIVSDKAQTTRNRIICVYTDESK------QIVFMDT 72 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ + V ++ D + L + V Sbjct: 73 PG---VHKPKHKLGEF--MVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQLKRVKVP 127 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID L +E LE + YP A VIP S+ ++ + + K + ET+ Sbjct: 128 VFLVVNKIDTLK---KEELLEAIVFYQDAYPFAG--VIPISAKDKENLSEILKVLEETL 181 >gi|284929261|ref|YP_003421783.1| tRNA modification GTPase trmE [cyanobacterium UCYN-A] gi|284809705|gb|ADB95402.1| tRNA modification GTPase trmE [cyanobacterium UCYN-A] Length = 457 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 33/192 (17%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL---NFFVPKDFSN 78 G L ++G +IA GR NVGKSSL+N +R N A ++ PG T+ + N + Sbjct: 216 GELLRSGL-KIAILGRPNVGKSSLLNSW-SRSNKAIVTDLPGTTRDIVESNLII------ 267 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 N+P + ++D G R ++ G + ++ L + L ID + G + + Sbjct: 268 --KNIP-IKVLDTAGI---RHTDNQIEKIGVQRTHLAANQADL--ILLTIDAQIGWTEEE 319 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +++ + K + +++ KID P + P+ EVI S+++ G Sbjct: 320 TEIYKKI--KHLPIILIVNKIDLNVPD------------LSIIPSEIQEVIKISAIQNLG 365 Query: 199 IEVLRKAILETI 210 I+ + +AIL I Sbjct: 366 IDSIEEAILNFI 377 >gi|153009953|ref|YP_001371168.1| GTP-binding protein Era [Ochrobactrum anthropi ATCC 49188] gi|151561841|gb|ABS15339.1| GTP-binding protein Era [Ochrobactrum anthropi ATCC 49188] Length = 311 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 29/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N LV K S + Q V F + + LVD Sbjct: 22 VALIGAPNAGKSTLVNQLVGTK----VSIVTHKVQTTRALVRGIFI---EDQAQIVLVDT 74 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG PK+ +D +WGG + +L+D + G+ + + + S + Sbjct: 75 PGIFR---PKRRLDRAMVTTAWGGA--------KDADIILVLLDSQGGLNENAEALLSSM 123 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +VL K+D++ P E K L+ A + S++ G + L K Sbjct: 124 KDVRRKKVLVLNKVDRVDPPVLLELARKANELV-----AFDQTFMISALNGSGCKDLAKY 178 Query: 206 ILETI 210 + E + Sbjct: 179 LAENV 183 >gi|153853792|ref|ZP_01995148.1| hypothetical protein DORLON_01139 [Dorea longicatena DSM 13814] gi|149753542|gb|EDM63473.1| hypothetical protein DORLON_01139 [Dorea longicatena DSM 13814] Length = 298 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 21/183 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ V L + + VD Sbjct: 10 VTLIGRPNVGKSTLMNQLIGQK-IAITSNKPQTTRNRIQTV------LTTDDGQIVFVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + G +V ++ER+ + V L++ + +Q + S L K Sbjct: 63 PGIHKAK------NKLGEYMVN-VAERTLNEVDVVLWLVEPTTFIGAGEQHIISQLKKVT 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KID + + K + Y A E++P S+ + L K I++ Sbjct: 116 TPVVLVINKIDSVKKEDVLPAIAAYKDV---YDFA--EIVPVSARNGDNTDELVKVIMKY 170 Query: 210 INY 212 + Y Sbjct: 171 LPY 173 >gi|193071490|ref|ZP_03052402.1| putative GTPase [Escherichia coli E110019] gi|192955212|gb|EDV85703.1| putative GTPase [Escherichia coli E110019] Length = 290 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 32/187 (17%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMIIT 89 Query: 90 DMPGYGYARAPKKNVDS-WGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDK 147 D+PG G +R N D+ + L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESR----NRDAEYEALYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHR 142 Query: 148 KAVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 143 GHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA- 200 Query: 195 KRKGIEV 201 R G E+ Sbjct: 201 -RTGWEL 206 >gi|313665450|ref|YP_004047321.1| ribosome-associated GTPase EngA [Mycoplasma leachii PG50] gi|312949987|gb|ADR24583.1| ribosome-associated GTPase EngA [Mycoplasma leachii PG50] Length = 435 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 11/156 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K +IA GR NVGKSSL+N LVN +N S G T V FS KN Sbjct: 171 KDDSTKIAIIGRPNVGKSSLVNSLVN-ENRMIVSEIEGTTLDA---VDISFSYNKN---K 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + V+ + L R LS + V L+ID + D ++ + Sbjct: 224 YTVIDTAGIRKKSKLGQTVEKYSYL--RSLSAITNSDIVLLMIDATKPITDQDTNIGGLI 281 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D + QE + K + IR Y Sbjct: 282 YDEKKPVIIVVNKWDLVK--NKQEQILKKEEEIRAY 315 >gi|312866411|ref|ZP_07726629.1| ribosome biogenesis GTPase Der [Streptococcus downei F0415] gi|311098105|gb|EFQ56331.1| ribosome biogenesis GTPase Der [Streptococcus downei F0415] Length = 436 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 14/145 (9%) Query: 24 LPKA----GPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 LPK P I FS GR NVGKSSLIN L+ + S G T+ + DF Sbjct: 163 LPKQEDDDNPDIIKFSLIGRPNVGKSSLINALLGEDRVI-ASPVAGTTRDA---IDTDFV 218 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + ++D G + +N + + I+R + V ++I+ G++ Sbjct: 219 DEEGQ--EYTMIDTAGMRKSGKVYENTEKYS--IMRSMRAIDRSDVVLMVINAEEGIRDY 274 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL 162 D+ + F + IV+ K D + Sbjct: 275 DKRIAGFAHEAGKGIVIVVNKWDTI 299 >gi|331668216|ref|ZP_08369068.1| conserved hypothetical protein [Escherichia coli TA271] gi|331064730|gb|EGI36637.1| conserved hypothetical protein [Escherichia coli TA271] Length = 290 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|300817719|ref|ZP_07097934.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1] gi|300529707|gb|EFK50769.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1] Length = 499 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 31/183 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 12 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 54 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 55 EIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 115 LRSREKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLE 165 Query: 205 AIL 207 +L Sbjct: 166 HVL 168 >gi|294790832|ref|ZP_06755990.1| GTP-binding protein Era [Scardovia inopinata F0304] gi|294458729|gb|EFG27082.1| GTP-binding protein Era [Scardovia inopinata F0304] Length = 343 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 9/68 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IA GR NVGKS+LIN LV K +A TS+ P T+ + V +D L LVD Sbjct: 27 IAVVGRPNVGKSTLINSLVG-KQVAITSSKPETTRKAIRAIVTRDDCQL-------VLVD 78 Query: 91 MPGYGYAR 98 PG R Sbjct: 79 TPGIHRPR 86 >gi|291278701|ref|YP_003495536.1| selenocysteine-specific translation elongation factor [Deferribacter desulfuricans SSM1] gi|290753403|dbj|BAI79780.1| selenocysteine-specific translation elongation factor [Deferribacter desulfuricans SSM1] Length = 615 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 21/176 (11%) Query: 35 SGRSNVGKSSLINILVNRK-NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 +G + GKSS++ L + + + G T L F ++ K + ++ +D+PG Sbjct: 11 AGHIDHGKSSIVKALTGTDPDRLKEEKSKGITIDLGF------ASFKKDDLIISFIDVPG 64 Query: 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 + L+ ++ + L+ID + G+K + + +D + Sbjct: 65 HE-------------ALVKNMIAGATNFNICVLVIDAKEGIKAQTIEHCNIIDYLQIENL 111 Query: 154 IV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 IV L K+D + ++ L + K I Y + E+I TS I L++ I++ Sbjct: 112 IVALNKVDLIDENILEKRLNEIKIFIEQYNFKNIEIIKTSVKDEDSITKLKETIIK 167 >gi|289578647|ref|YP_003477274.1| ribosome-associated GTPase EngA [Thermoanaerobacter italicus Ab9] gi|289528360|gb|ADD02712.1| ribosome-associated GTPase EngA [Thermoanaerobacter italicus Ab9] Length = 439 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 9/148 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ +P+ GL +IA GR NVGKSSL+N ++ + + S+ PG T+ + Sbjct: 162 VKKLPQEGLEYSEETIKIAVIGRPNVGKSSLVNKILGEERVI-VSDIPGTTRDA---IDT 217 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 FS N L+D G ++++ + L ERS + C+ L+ID G Sbjct: 218 PFSKDGKN---YVLIDTAGIRRKSRISESIERYSVLRALTAIERSDI-CL-LMIDAIEGP 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 + D + + + IV+ K D + Sbjct: 273 AEQDTKIAGYAFENGKGIIIVVNKWDAI 300 >gi|260845837|ref|YP_003223615.1| hypothetical protein ECO103_3763 [Escherichia coli O103:H2 str. 12009] gi|257760984|dbj|BAI32481.1| hypothetical protein ECO103_3763 [Escherichia coli O103:H2 str. 12009] Length = 290 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTRKVRCF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP A+ EKT+ + R + AHP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQARNIREKTEAVFRLFRPAHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|188577281|ref|YP_001914210.1| GTP-binding protein Era [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521733|gb|ACD59678.1| GTP-binding protein Era [Xanthomonas oryzae pv. oryzae PXO99A] Length = 285 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 24/179 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALVDMPG 93 GR NVGKS+L N LV K ++ SN P T+H + P + LVD PG Sbjct: 3 GRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIA--------TFPEGQLVLVDTPG 53 Query: 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF--LDKKAVS 151 R K+ ++ V + R +L V + + ++D +F L V Sbjct: 54 L--HREQKRAMNR-----VMNRAARGSLEGVDAAVLVIEAGRWDEEDTLAFRVLSDAEVP 106 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D+L TA R + HP S++KRKG+E L +L+ + Sbjct: 107 VVLVVNKVDRLKDKTALLPFLAQVSEGRTFAAVHP----VSALKRKGLEALVGDLLKLV 161 >gi|163813998|ref|ZP_02205391.1| hypothetical protein COPEUT_00150 [Coprococcus eutactus ATCC 27759] gi|158450692|gb|EDP27687.1| hypothetical protein COPEUT_00150 [Coprococcus eutactus ATCC 27759] Length = 445 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L K ++ + PG T+ + D + L N L+ Sbjct: 9 PIVAIVGRPNVGKSTLFNVLAGEK-ISIVQDTPGVTRDRIY---ADINWLDYNF---TLI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P+ + +I++ + E++ T + + D R G+ D V Sbjct: 62 DTGGI----EPETD-----NIILKSMREQAEIAIETADVIIFMTDVRQGMVDDDSKVADM 112 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L + +V+ K+D Sbjct: 113 LRRSKKPIVLVVNKVDSFE 131 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 11/157 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L+ + S+ G T+ D ++N + Sbjct: 183 PRIAIIGKPNVGKSSIINKLLGEDRVI-VSDIAGTTRD-----AIDTEVVRNG-REYVFI 235 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + I+R +S L+ID G+ D + ++ Sbjct: 236 DTAGLRKKSKIKEDIERYS--IIRTVSAVERCNVAVLVIDATEGITDQDAKIAGIAHERG 293 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 I + K D + +T+ K IRN + P Sbjct: 294 KGMIIAVNKWDAIEKN--DKTIYKFTEEIRNKLSYMP 328 >gi|42560947|ref|NP_975398.1| GTP-binding protein EngA [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81829393|sp|Q6MTJ6|DER_MYCMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|42492444|emb|CAE77040.1| conserved GTPase of unknown function [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321230|gb|ADK69873.1| ribosome-associated GTPase EngA [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 435 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 11/156 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K +IA GR NVGKSSL+N LVN +N S G T V FS KN Sbjct: 171 KDDSTKIAIIGRPNVGKSSLVNSLVN-ENRMIVSEIEGTTLDA---VDISFSYNKN---K 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + V+ + L R LS + V L+ID + D ++ + Sbjct: 224 YTVIDTAGIRKKSKLGQTVEKYSYL--RSLSAITNSDIVLLMIDATKPITDQDTNIGGLI 281 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D + QE + K + IR Y Sbjct: 282 YDEKKPVIIVVNKWDLVK--NKQEQILKKEEEIRAY 315 >gi|85014127|ref|XP_955559.1| translation initiation factor IF-2P [Encephalitozoon cuniculi GB-M1] gi|19171253|emb|CAD26978.1| TRANSLATION INITIATION FACTOR IF-2P [Encephalitozoon cuniculi GB-M1] Length = 659 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 21/139 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FF-VPKDFSNL---KNNL 83 P G + GK+ L++ L R++ + A G TQ + FF V + F ++ L Sbjct: 75 PICCILGHVDTGKTKLLDKL--RESNVQEEEAGGITQQIGATFFPVSELFRKCGKRESKL 132 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + ++D PG+ +S+ L R S L++D HG++ + Sbjct: 133 PGILVIDTPGH----------ESFANLRTRG---SSLCNLAILVVDIVHGIEAQTLESIE 179 Query: 144 FLDKKAVSYQIVLTKIDKL 162 L K+ + + L KID+L Sbjct: 180 LLRKRRTPFVVALNKIDRL 198 >gi|323971898|gb|EGB67122.1| hypothetical protein ERHG_02102 [Escherichia coli TA007] Length = 290 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVYAGTREVQRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSART 202 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 203 GWELDTLVSALMTAL 217 >gi|284045183|ref|YP_003395523.1| ribosome-associated GTPase EngA [Conexibacter woesei DSM 14684] gi|283949404|gb|ADB52148.1| ribosome-associated GTPase EngA [Conexibacter woesei DSM 14684] Length = 484 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 10/163 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N ++ + S G T+ +P F + + + LVD Sbjct: 176 LALIGRPNVGKSSLVNKMLGSDRVI-VSEVAGTTRDA-IDLPFRFEDRR-----LILVDT 228 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G +++ + L R +ER+ + V + D + GV D + + + Sbjct: 229 AGMRRQAKVGDSIEYYTALRSRRAAERADVALV--VCDAQEGVTSQDLRIAELAMQSGCA 286 Query: 152 YQIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPTSS 193 +VL K D E L+ + + N P V+ TS+ Sbjct: 287 TALVLNKWDLTGGEDEPEFDLDHERARVNNKLRLRPRVLTTSA 329 >gi|251772615|gb|EES53180.1| GTP-binding protein (Era) [Leptospirillum ferrodiazotrophum] Length = 335 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 44/199 (22%) Query: 26 KAGPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 K PP +A G N GKS+L+N LV K ++ S P T+ L ++ Sbjct: 23 KEAPPSGRAGLVAVVGLPNAGKSTLVNALVGEK-VSAVSATPQTTRTL-------IRGIR 74 Query: 81 NNLPAMAL-VDMPGYGYARAPKKNVDSWGGLIVRYLSER-----STLRCVYLLIDCRHGV 134 A+ +D PG+ + G L+ + + ER + V ++D Sbjct: 75 TEERGQAIFLDTPGFHQS----------GPLLNQQMGERLSAALAEAHVVLWVVDITS-- 122 Query: 135 KQIDQDVFSFLDKKAVSYQ----------IVLTKIDKLSPTTAQET-LEKTKYLIRNYPT 183 K+ D+D FLD + + LTKID+L PT + LE ++ + R++ Sbjct: 123 KKRDRDFARFLDLIRAPRRGEGGANPPLIVALTKIDRLGPTNMIPSLLEFSREMERHHIV 182 Query: 184 AHPEVIPTSSVKRKGIEVL 202 E++P S +K ++ L Sbjct: 183 G--EIVPLSGLKGANLDPL 199 >gi|269797893|ref|YP_003311793.1| small GTP-binding protein [Veillonella parvula DSM 2008] gi|269094522|gb|ACZ24513.1| small GTP-binding protein [Veillonella parvula DSM 2008] Length = 444 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN++ ++ + PG T+ +F D L ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKR-ISIVEDIPGVTRDRIYF---DAEWLNREF---TMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L E + + ++D + G+ D++V + L Sbjct: 57 DTGGIEFITENSHVIPKMMRLQAELAIEEAD--VILFVVDGKQGIVPADEEVANILRASG 114 Query: 150 VSYQIVLTKIDKLS 163 +V+ KID ++ Sbjct: 115 KPIVLVVNKIDSVN 128 >gi|169333910|ref|ZP_02861103.1| hypothetical protein ANASTE_00296 [Anaerofustis stercorihominis DSM 17244] gi|169259475|gb|EDS73441.1| hypothetical protein ANASTE_00296 [Anaerofustis stercorihominis DSM 17244] Length = 458 Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 28/190 (14%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G + K G +A G+ NVGKS L+N L+N +N A + G T+ + + N+ Sbjct: 214 EKGEILKDGIK-VAIIGKPNVGKSQLLNALIN-ENKAIVTEEAGTTRD----IVDEVVNI 267 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 K +P + +D G R V+ G I + + + ID + D Sbjct: 268 K-GVP-VKFIDTAGI---RNADSKVEKIG--IDKSIEMLEESNIILFCIDTSRALDTEDM 320 Query: 140 DVFSFL-DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 D+ L D K VL ++K+ T +T++ NY T + S++K++G Sbjct: 321 DIIKMLPDNKE-----VLVVLNKMDLNTNVDTVKA----FDNYKT-----VEISALKKEG 366 Query: 199 IEVLRKAILE 208 IE + I E Sbjct: 367 IEKIENKIYE 376 >gi|326575993|gb|EGE25916.1| GTP-binding protein EngA [Moraxella catarrhalis CO72] Length = 472 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 9/140 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + A ++ G T+ + + + + +V Sbjct: 5 PVVALIGRPNVGKSTLFNQLTKSRQ-ALVADLAGLTR------DRQYGDAHFENKSFIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G N+D + + + + V ++D R G+ D ++ FL Sbjct: 58 DTGGIGEMDDGSGNIDDY--MATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLG 115 Query: 150 VSYQIVLTKIDKLSPTTAQE 169 +V K+D + E Sbjct: 116 KPVFLVANKMDGVHEAAYAE 135 >gi|325972629|ref|YP_004248820.1| GTP-binding protein engA [Spirochaeta sp. Buddy] gi|324027867|gb|ADY14626.1| GTP-binding protein engA [Spirochaeta sp. Buddy] Length = 514 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 11/149 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA G+ N GKS+L N+LV K+++ S+ G T+ + V F N Sbjct: 194 KIAILGKPNTGKSTLTNLLVG-KDISIVSDIAGTTRDV---VMGSF-----NYKGSDFTV 244 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 + G R K + D + R + V L+ID G+ D+ + + + ++ Sbjct: 245 LDTAGIRRKSKVDEDVEYYSVNRAIKTIDEADVVLLMIDSVEGLADQDKKIANLIVRRGK 304 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 +VL KID L T LE K IR Sbjct: 305 GIILVLNKIDLL--TGIGNELEAIKDRIR 331 >gi|302389542|ref|YP_003825363.1| ribosome-associated GTPase EngA [Thermosediminibacter oceani DSM 16646] gi|302200170|gb|ADL07740.1| ribosome-associated GTPase EngA [Thermosediminibacter oceani DSM 16646] Length = 436 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 9/133 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G ++A G+ NVGKSSL+N ++ + + S+ PG T+ P ++ K M Sbjct: 174 GVIKVAVVGKPNVGKSSLVNAILGEERVI-VSDIPGTTRD-AIDTPFEYEGQK-----MV 226 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G K++++ + +R L V +++D + + D+ + + Sbjct: 227 LIDTAGMRRKSRVKEDIEFYSN--IRALGAVERADIVLVVLDATQEISEQDKKIAGIAHE 284 Query: 148 KAVSYQIVLTKID 160 + IV+ K D Sbjct: 285 AGKAVIIVVNKWD 297 >gi|296113385|ref|YP_003627323.1| GTP-binding protein EngA [Moraxella catarrhalis RH4] gi|295921079|gb|ADG61430.1| GTP-binding protein EngA [Moraxella catarrhalis RH4] gi|326559230|gb|EGE09661.1| GTP-binding protein EngA [Moraxella catarrhalis 46P47B1] gi|326559869|gb|EGE10269.1| GTP-binding protein EngA [Moraxella catarrhalis 7169] gi|326569645|gb|EGE19697.1| GTP-binding protein EngA [Moraxella catarrhalis BC1] gi|326570126|gb|EGE20171.1| GTP-binding protein EngA [Moraxella catarrhalis BC8] gi|326570864|gb|EGE20888.1| GTP-binding protein EngA [Moraxella catarrhalis BC7] gi|326574414|gb|EGE24356.1| GTP-binding protein EngA [Moraxella catarrhalis 101P30B1] gi|326576405|gb|EGE26314.1| GTP-binding protein EngA [Moraxella catarrhalis O35E] Length = 472 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 9/140 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + A ++ G T+ + + + + +V Sbjct: 5 PVVALIGRPNVGKSTLFNQLTKSRQ-ALVADLAGLTR------DRQYGDAHFENKSFIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G N+D + + + + V ++D R G+ D ++ FL Sbjct: 58 DTGGIGEMDDGSGNIDDY--MATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLG 115 Query: 150 VSYQIVLTKIDKLSPTTAQE 169 +V K+D + E Sbjct: 116 KPVFLVANKMDGVHEAAYAE 135 >gi|325983456|ref|YP_004295858.1| hypothetical protein NAL212_2911 [Nitrosomonas sp. AL212] gi|325532975|gb|ADZ27696.1| Protein of unknown function DUF3482 [Nitrosomonas sp. AL212] Length = 468 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G +N GK+SLI ++ +A G T+H+ + + NN P + L D Sbjct: 17 IAVVGHTNTGKTSLIRTMLRSTEFGIIEDAAGTTRHV-----EQATISANNEPILNLYDT 71 Query: 92 PGYGYARA 99 PG +RA Sbjct: 72 PGLEDSRA 79 >gi|237704001|ref|ZP_04534482.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|226901913|gb|EEH88172.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|281181410|dbj|BAI57740.1| conserved hypothetical protein [Escherichia coli SE15] gi|323955418|gb|EGB51186.1| hypothetical protein ERLG_03326 [Escherichia coli H263] Length = 290 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMIIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHP-VVAVSACT 202 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 203 GWELDTLVSALMTAL 217 >gi|223043265|ref|ZP_03613312.1| ribosome-associated GTPase EngA [Staphylococcus capitis SK14] gi|222443476|gb|EEE49574.1| ribosome-associated GTPase EngA [Staphylococcus capitis SK14] Length = 436 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 11/145 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ V ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEERVI-VSNVAGTTRDA---VDTEYSYEGQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS + V ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERSNV--VLVIIDAEQGIIEQDKRVAGYAHEEGKAIVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRN 180 + K D + + +T++K +RN Sbjct: 293 VNKWDTVEKDS--KTMKKFTEDVRN 315 >gi|157875274|ref|XP_001686037.1| translation initiation factor if-2 [Leishmania major strain Friedlin] gi|68129110|emb|CAJ06767.1| putative translation initiation factor IF-2 [Leishmania major strain Friedlin] Length = 816 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 37/165 (22%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFF------------VPKDFSNLKN 81 G + GK+SL++ + R + A G TQ + FF + K NL Sbjct: 233 GHVDTGKTSLLDRI--RSTNVQGGEAGGITQQIGATFFPRESLVSATAELIKKHKCNL-- 288 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 N+P + ++D PG+ N+ S G S L++D HG++Q ++ Sbjct: 289 NVPGLLVIDTPGH----ESFTNLRSRGS---------SLCDIAILVVDIMHGLEQQTRES 335 Query: 142 FSFLDKKAVSYQIVLTKIDKL------SPTTAQETLEKTKYLIRN 180 L +K + + L K+D+L Q++LE K +R+ Sbjct: 336 IRLLREKRCPFIVALNKVDRLFDWQPHENMDIQQSLELQKAHVRS 380 >gi|5410352|gb|AAD43046.1|AF124045_5 GTP-binding protein-like [Sorghum bicolor] Length = 142 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 10/69 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K T + PG+T+H + + + L D Sbjct: 1 VGFVGYPNVGKSSSINALVGEKRTGVT-HTPGKTKHFQTLIISE---------ELTLCDC 50 Query: 92 PGYGYARAP 100 PG + P Sbjct: 51 PGLVFPSFP 59 >gi|5114184|gb|AAD40230.1|AF123492_2 Era [Pseudomonas aeruginosa] Length = 305 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 17 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGEVQAVYVD 68 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 P G ++ +K ++ + + R S V + + R + DQ V + + Sbjct: 69 TP--GLHKSGEKALNRY---MNRTASAALKDVDVVIFVVDRTRWTEEDQMVLERVQYVSC 123 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I + K D++ + L ++L + P A EV+P S ++VL K + E + Sbjct: 124 PVLIAVNKTDRIEEKA--DLLPHLEWLTQQLPKA--EVVPISGQDGTNLDVLEKLVAECL 179 >gi|329945552|ref|ZP_08293289.1| ferrous iron transport protein B [Actinomyces sp. oral taxon 170 str. F0386] gi|328528732|gb|EGF55684.1| ferrous iron transport protein B [Actinomyces sp. oral taxon 170 str. F0386] Length = 709 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 9/74 (12%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 AG P IA +G N GK+S+ N L A+T N PG T V + K + Sbjct: 38 AGSPRIALAGAPNAGKTSIYNALTGLH--AKTGNYPGVT------VQRSLGTCKIGGTTL 89 Query: 87 ALVDMPGYGYARAP 100 + D+PG Y+ P Sbjct: 90 TIEDLPG-AYSLDP 102 >gi|206560243|ref|YP_002231007.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315] gi|238693091|sp|B4EAW5|DER_BURCJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|198036284|emb|CAR52180.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315] Length = 445 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 19/180 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + +V + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNALIGEDRVI-AFDMPGTTRD-SIYV-----DFERNGKKYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLS----PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D + K K+L ++ +H S+ K+ GI L +++ Sbjct: 292 ALVIGVNKWDGFDDHARDRAKADLTRKLKFL--DFAKSH----FISAAKKTGIGALMRSV 345 >gi|326560782|gb|EGE11149.1| GTP-binding protein EngA [Moraxella catarrhalis 103P14B1] gi|326563523|gb|EGE13782.1| GTP-binding protein EngA [Moraxella catarrhalis 12P80B1] Length = 472 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 9/140 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + A ++ G T+ + + + + +V Sbjct: 5 PVVALIGRPNVGKSTLFNQLTKSRQ-ALVADLAGLTR------DRQYGDAHFENKSFIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G N+D + + + + V ++D R G+ D ++ FL Sbjct: 58 DTGGIGEMDDGSGNIDDY--MATQSYTAIHEADIVVFVVDARAGLIGADSEIAHFLHTLG 115 Query: 150 VSYQIVLTKIDKLSPTTAQE 169 +V K+D + E Sbjct: 116 KPVFLVANKMDGVHEAAYAE 135 >gi|315640637|ref|ZP_07895743.1| GTP-binding protein Era [Enterococcus italicus DSM 15952] gi|315483665|gb|EFU74155.1| GTP-binding protein Era [Enterococcus italicus DSM 15952] Length = 298 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 23/167 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +A GR NVGKS+L+N +V +K + A R + + KD + +D Sbjct: 9 VALVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTKD--------AQIVFID 60 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + + ++ S + + + +I + D + L K++V Sbjct: 61 TPGI---HKPKSRLGDF--MVESAFSALNEVDVILFMISADQKRGKGDDLIIERLKKQSV 115 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVK 195 +V+ K+DK+ P E +I +Y EV+P S+ + Sbjct: 116 PVFLVVNKLDKVHPDALLE-------VIADYSQQMDFAEVVPISATE 155 >gi|312082897|ref|XP_003143635.1| hypothetical protein LOAG_08056 [Loa loa] gi|307761200|gb|EFO20434.1| hypothetical protein LOAG_08056 [Loa loa] Length = 619 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + G NVGKSS IN L+N+K ++ S PG+T+HL V + L Sbjct: 353 PLVVGMVGYPNVGKSSTINKLLNQKKVS-VSATPGKTRHLQTLVVD---------KELTL 402 Query: 89 VDMPG 93 D PG Sbjct: 403 CDCPG 407 >gi|317051076|ref|YP_004112192.1| ribosome-associated GTPase EngA [Desulfurispirillum indicum S5] gi|316946160|gb|ADU65636.1| ribosome-associated GTPase EngA [Desulfurispirillum indicum S5] Length = 457 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 27/183 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N + +K +A + PG T+ N+ +++ +V Sbjct: 5 PIVCIIGRPNVGKSTLFN-RIAKKRIAIVEDIPGVTRDRNY------HDVEWEDKEFTIV 57 Query: 90 DMPGY----GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 D G+ G V+ G ++ R ++LL D + G D + L Sbjct: 58 DTGGFESETGKGSLEASMVEQTG------IAAAEADRVIFLL-DGQTGPIADDFAIMDML 110 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + KID S K L+ Y EV P S+ +G++ L Sbjct: 111 RRHEKPVYIAVNKIDAPS---------HEKILLDFYQLGVDEVFPVSAAHGRGVDDLLDT 161 Query: 206 ILE 208 + E Sbjct: 162 VTE 164 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 10/139 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + +N S PG T+ P ++ L Sbjct: 184 PIKVAIVGRPNVGKSSLVNKICG-ENRVVASEVPGTTRD-TIHTP-----VRREGRDFIL 236 Query: 89 VDMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G ++A +N++ + + R ++ V L++D G+ D V S+ + Sbjct: 237 LDTAGIRRKSKAYSENLERYS--VFRSITAIEEAHVVILMLDATEGITDQDLKVASYAWE 294 Query: 148 KAVSYQIVLTKIDKLSPTT 166 I + K D ++ T Sbjct: 295 AGKPIIIAVNKWDLVAKET 313 >gi|260887890|ref|ZP_05899153.1| GTP-binding protein [Selenomonas sputigena ATCC 35185] gi|330838754|ref|YP_004413334.1| small GTP-binding protein [Selenomonas sputigena ATCC 35185] gi|260862396|gb|EEX76896.1| GTP-binding protein [Selenomonas sputigena ATCC 35185] gi|329746518|gb|AEB99874.1| small GTP-binding protein [Selenomonas sputigena ATCC 35185] Length = 399 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 18/139 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GR N GKSSLIN + ++ +A S G T V K L L + L+D Sbjct: 14 IGFFGRRNAGKSSLINAITGQE-VAVVSPEKGTTTD---PVAKAMELLP--LGPVLLIDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIV---RYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG+ + G L V R + ++ + L++D G+ +D+++ +K Sbjct: 68 PGF-------DDTGDLGELRVKRTRRILNKTDI--AVLVLDAAEGMTAVDEELMQIFREK 118 Query: 149 AVSYQIVLTKIDKLSPTTA 167 + + IV K + P ++ Sbjct: 119 DIPHLIVCNKCEDEKPPSS 137 >gi|255719678|ref|XP_002556119.1| KLTH0H05522p [Lachancea thermotolerans] gi|238942085|emb|CAR30257.1| KLTH0H05522p [Lachancea thermotolerans] Length = 639 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 11/76 (14%) Query: 19 PEIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P I LP P +I G NVGKSS IN LV K ++ S+ PG+T+H F Sbjct: 327 PLISPLPGQEPLIQIGLVGYPNVGKSSTINALVGSKKVS-VSSTPGKTKH--------FQ 377 Query: 78 NLKNNLPAMALVDMPG 93 +K + M L D PG Sbjct: 378 TIKLSERVM-LCDCPG 392 >gi|146089805|ref|XP_001470477.1| GTP-binding protein-like protein; guanine nucleotide-binding protein-like protein [Leishmania infantum] gi|134070510|emb|CAM68853.1| GTP-binding protein-like protein [Leishmania infantum JPCM5] Length = 905 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVD 90 I F G NVGKSSL+N + K + S PG T+H+ VP + L ++ P +AL Sbjct: 715 IGFVGHPNVGKSSLLNCIRGTK-VVSVSATPGHTKHMQTIPVPSEHLTLVDS-PGLAL-- 770 Query: 91 MPGYGYAR 98 P +G R Sbjct: 771 -PLFGVPR 777 >gi|115676744|ref|XP_791373.2| PREDICTED: similar to Mitochondrial translational initiation factor 2 [Strongylocentrotus purpuratus] gi|115970081|ref|XP_001184785.1| PREDICTED: similar to Mitochondrial translational initiation factor 2 [Strongylocentrotus purpuratus] Length = 590 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 29/189 (15%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 L K PP + G + GK++L++ L RK A G TQH+ F + L Sbjct: 192 LLKLRPPVVTIMGHVDHGKTTLLDTL--RKTSVAAGEAGGITQHIGAF--------QVQL 241 Query: 84 PA---MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 P+ + +D PG+ +A ++ ++V L++ GV + ++ Sbjct: 242 PSGQIITFLDTPGHAAFKAMRERGAEVTDIVV-------------LVVAADDGVMEQTRE 288 Query: 141 VFSFLDKKAVSYQIVLTKIDK--LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + K V + L K DK P ++ L + Y + + S++K + Sbjct: 289 SIKYARKAGVPIIVALNKCDKPGADPDFTRKDLLANDITVEEY-GGDIQCVEISALKGRN 347 Query: 199 IEVLRKAIL 207 +E L +A++ Sbjct: 348 LEALCEAVM 356 >gi|32473806|ref|NP_866800.1| GTP-binding protein [Rhodopirellula baltica SH 1] gi|32444342|emb|CAD74340.1| probable GTP-binding protein [Rhodopirellula baltica SH 1] Length = 472 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 13/117 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A GR NVGKSSL N L R+ LA N G T+ + + ++++ L+ Sbjct: 22 PQVAIVGRPNVGKSSLFNWLA-RRRLAIVDNFEGVTR------DRMTTLIESDDQFFELI 74 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFL 145 D G G ++ D + R + ++ + L++D + G+ +D++V L Sbjct: 75 DTGGMGV-----EDADDLTSDVRRQIDMAIASADVILLVVDVQTGLMPLDEEVVERL 126 >gi|323945945|gb|EGB41985.1| hypothetical protein EREG_02489 [Escherichia coli H120] Length = 290 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMIIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHP-VVAVSACT 202 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 203 GWELDTLVSALMTAL 217 >gi|167623303|ref|YP_001673597.1| GTP-binding protein EngA [Shewanella halifaxensis HAW-EB4] gi|189037161|sp|B0TLI8|DER_SHEHH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|167353325|gb|ABZ75938.1| small GTP-binding protein [Shewanella halifaxensis HAW-EB4] Length = 490 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ L Sbjct: 199 PIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRD-SIYIP-----MERQGREYVL 251 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L+ID R G+ + D + F+ Sbjct: 252 IDTAGVRRRSKVHETVEKFS--VIKTLKAVEDSNVVLLVIDAREGIAEQDLGLLGFVLNA 309 Query: 149 AVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 310 GRALVIAVNKWDGID 324 >gi|320354718|ref|YP_004196057.1| tRNA modification GTPase trmE [Desulfobulbus propionicus DSM 2032] gi|320123220|gb|ADW18766.1| tRNA modification GTPase trmE [Desulfobulbus propionicus DSM 2032] Length = 463 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 29/182 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK---NNLPAMAL 88 + +G+ NVGKSSL+N L+ + A + PG T +D + +P + L Sbjct: 227 VVITGQPNVGKSSLLNTLLQEER-ALVTPLPGTT--------RDTIEERIAIRGIP-LHL 276 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G P V++ G R E++ L V L+D + G ++ D++++ L K Sbjct: 277 VDTAGIRLHHDP---VEALGIERARQKVEQADL--VLFLVDAQVGWRETDEELYRSLGNK 331 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + IV+ K D T E+ + + + +V+ S+ +++GI+ L++A+ + Sbjct: 332 --PHVIVVNKRDL-------ATKEQIASIFSRF--SGKKVVAISAKQQEGIDELQEAVYQ 380 Query: 209 TI 210 I Sbjct: 381 AI 382 >gi|237751555|ref|ZP_04582035.1| translation initiation factor IF-2 [Helicobacter bilis ATCC 43879] gi|229372921|gb|EEO23312.1| translation initiation factor IF-2 [Helicobacter bilis ATCC 43879] Length = 950 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 30/184 (16%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP + G + GK+SL++ + N + +S A G TQH+ ++ ++ N ++ Sbjct: 451 PPVVTIMGHVDHGKTSLLDYIRNSR--IASSEAGGITQHIGAYM------VQKNDKWISF 502 Query: 89 VDMPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D PG+ +A+ + S G + ++I GVKQ Q + + Sbjct: 503 IDTPGHEAFAQ-----MRSRGAQVT---------DIAIIVIAADDGVKQ--QSIEALNHA 546 Query: 148 KAVSYQIV--LTKIDK--LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 K+ + QI+ + K+DK +P + + + ++ + E IP S+ +G++VL Sbjct: 547 KSANVQIIIAMNKMDKEGANPDKLKAECAELGFTPMDWGGEY-EFIPISAKTGEGVDVLL 605 Query: 204 KAIL 207 + IL Sbjct: 606 ETIL 609 >gi|159904104|ref|YP_001551448.1| GTPase SAR1 and related small G protein [Prochlorococcus marinus str. MIT 9211] gi|159889280|gb|ABX09494.1| GTPase SAR1 and related small G protein [Prochlorococcus marinus str. MIT 9211] Length = 440 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 65/162 (40%), Gaps = 16/162 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR VGKSSL+N L+ +K L T A G T+ V +S+ NL + LVD Sbjct: 53 ITVFGRVGVGKSSLLNALLGKK-LFPTDVAHGCTRKTKSVV---WSHEIGNLTQVELVDT 108 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A + L+ R L C +L V I+ + L Sbjct: 109 PGIDEIAAKGRA----------RLASRIALNCDLVLFVLDSDVNVIELEAIENLLHSGKP 158 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +VL + D+ + L+ ++ R PTA +I S Sbjct: 159 LLLVLNRCDQWRSHEIKNVLKSIRH--RLPPTAKDLIIEAVS 198 >gi|322499949|emb|CBZ35023.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 905 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVD 90 I F G NVGKSSL+N + K + S PG T+H+ VP + L ++ P +AL Sbjct: 715 IGFIGHPNVGKSSLLNCIRGTK-VVSVSATPGHTKHMQTIPVPSEHLTLVDS-PGLAL-- 770 Query: 91 MPGYGYAR 98 P +G R Sbjct: 771 -PVFGVPR 777 >gi|301511106|ref|ZP_07236343.1| GTP-binding protein Era [Acinetobacter baumannii AB058] Length = 297 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 22/180 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD PG Sbjct: 1 GRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDTPGMH 53 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKKAVSY 152 KK V + ++ R + S LR V L +ID H Q D V L + Sbjct: 54 -----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDA-HKWTQNDDLVLEKLKNADMPV 105 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 +V+ K D L + + + N+ E++P S+++ +E L + I + + Y Sbjct: 106 ILVINKADTFGDKREILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEKYLPY 161 >gi|145219270|ref|YP_001129979.1| GTP-binding protein EngA [Prosthecochloris vibrioformis DSM 265] gi|189037154|sp|A4SDB8|DER_PROVI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145205434|gb|ABP36477.1| small GTP-binding protein [Chlorobium phaeovibrioides DSM 265] Length = 436 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 16/146 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G +A GR NVGKSS +N L+ N S+ PG T+ + F+ N Sbjct: 175 GAIRLAVVGRPNVGKSSFVNALLG-NNRQIVSDIPGTTRDA---IDTRFT---RNQQDFL 227 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ + L SE++ RC V ++ID G+++ D + + Sbjct: 228 LIDTAGLRKRTKISAGIEYYSSL----RSEKAIERCEVVMVMIDAGPGIEKQDLKIINMA 283 Query: 146 DKKAVSYQIVLTK---IDKLSPTTAQ 168 ++ + +++ K I+K S T+ Q Sbjct: 284 TERKRAVLLLVNKWDLIEKDSKTSKQ 309 >gi|332686568|ref|YP_004456342.1| ABC transporter ATPase [Melissococcus plutonius ATCC 35311] gi|332370577|dbj|BAK21533.1| ATPase components of ABC transporters with duplicated ATPase domains [Melissococcus plutonius ATCC 35311] Length = 552 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + E LL +AG I +G++ GK++L+NIL R L S G+T HL ++ + Sbjct: 337 LNEFNLLVQAGD-RIGITGKNGTGKTTLLNILSGRLPLEAGSYTVGQTVHLAYYTQQ 392 >gi|322379379|ref|ZP_08053750.1| GTP-binding protein EngA [Helicobacter suis HS1] gi|321148197|gb|EFX42726.1| GTP-binding protein EngA [Helicobacter suis HS1] Length = 448 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 13/182 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L+ ++ A S PG T P D S +N + VD Sbjct: 188 QVGIIGRVNVGKSSLLNALIEQER-ALVSEIPGTT-----IDPVDQSISHHN-QEICFVD 240 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R+ + ++ + R + E+S + L++D ++D+ + S + + Sbjct: 241 TAGL-RQRSKVEGLEKFALDRTRKVLEKSHI--ALLVLDASTPFVELDEKIASLAGEYNL 297 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D + + +E K+ + A ++ TS++ ++ I ++ ILE Sbjct: 298 GVIVVFNKWD-IKHAGFETIIEDFKHKFKFLQYA--PLLTTSAISKRHILQIKDKILEVY 354 Query: 211 NY 212 Y Sbjct: 355 AY 356 >gi|221121018|ref|XP_002155134.1| PREDICTED: similar to Eukaryotic translation initiation factor 5B [Hydra magnipapillata] Length = 1273 Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 36/159 (22%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFS 77 P I G + GK+ +++ + R+ + A G TQ + +P K+F Sbjct: 685 PVICVLGHVDTGKTKILDKI--RRTNVQDGEAGGITQQIGATNIPLANIQEQTKMVKEFQ 742 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVK 135 L+ +P + ++D PG+ +S+ L R + C L++D HG++ Sbjct: 743 KLEMKIPGLLVIDTPGH----------ESFSNL-----RSRGSNLCDMAILVVDLMHGLE 787 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKL-----SPTTAQE 169 Q + + L K + + L KID++ SP T E Sbjct: 788 QQTIESINLLKSKKTPFVVALNKIDRVYEWKKSPQTQVE 826 >gi|157074062|ref|NP_001096742.1| guanine nucleotide-binding protein-like 1 [Bos taurus] gi|148743850|gb|AAI42217.1| GNL1 protein [Bos taurus] Length = 607 Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK ++ S PG T++ +F+ P Sbjct: 357 KDGVATIGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TP 405 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 406 SVKLCDCPG 414 >gi|332880705|ref|ZP_08448378.1| hydrogenase maturation GTPase HydF [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681339|gb|EGJ54263.1| hydrogenase maturation GTPase HydF [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 399 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 19/92 (20%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL---NFFVPKDFSNLKN 81 P+A I GR N GKSSL+N+L ++ +A S+ PG T + N +P Sbjct: 7 PRANRFHIGLFGRRNSGKSSLVNMLTGQQ-VAVVSDVPGTTTDVVLKNIELP-------- 57 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVR 113 + A LVD GY + GGL VR Sbjct: 58 GVGASVLVDTAGY-------DDEGELGGLRVR 82 >gi|321463591|gb|EFX74606.1| hypothetical protein DAPPUDRAFT_307190 [Daphnia pulex] Length = 580 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 14/70 (20%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVPKDFSNLKNNL 83 ++G I G+ NVGKSSLIN L+ +K + S PG T+H F P N+K Sbjct: 341 QSGMLTIGCVGQPNVGKSSLINALMGKK-VVSVSRTPGHTKHFQTIFLTP----NVK--- 392 Query: 84 PAMALVDMPG 93 L D PG Sbjct: 393 ----LCDCPG 398 >gi|304315770|ref|YP_003850915.1| small GTP-binding protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777272|gb|ADL67831.1| small GTP-binding protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 411 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 34/195 (17%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT----QHLNFFVPKDFSNLK 80 P A IA GR N GKSS+IN L N +N+A S+ G T Q +P Sbjct: 5 PNASRLHIAIFGRRNAGKSSIINALTN-QNIAIVSDVAGTTTDPVQKAMEILP------- 56 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQI 137 + + ++D G + G L V+ E R+ L L+ID G + Sbjct: 57 --IGPVVIIDTAGL-------DDTGELGELRVKKTYEVLNRTDL--ALLIIDGTIGPSEF 105 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 ++++ + +K + V+ K+D + +++T E K L E++ TS+ Sbjct: 106 EEEILKKIKEKNIPVVGVVNKVDLVDFHFSKKT-EWEKRL-------KLELVETSANSGY 157 Query: 198 GIEVLRKAILETINY 212 GIE L++ I++ Y Sbjct: 158 GIEELKRQIIKKAPY 172 >gi|257784531|ref|YP_003179748.1| small GTP-binding protein [Atopobium parvulum DSM 20469] gi|257473038|gb|ACV51157.1| small GTP-binding protein [Atopobium parvulum DSM 20469] Length = 441 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 12/155 (7%) Query: 19 PEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDF 76 PE P+ G +A GR NVGKSSL N L N+K + S+ G T+ ++ + Sbjct: 167 PEADEEPEDDGILNLAIIGRPNVGKSSLANRLANKKR-SIVSDVAGTTRDAIDTMIEWKG 225 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + ++ LVD G ++V+ + +VR L L++D GV + Sbjct: 226 TPIR-------LVDTAGIRKKSQVHEDVEYYS--LVRGLQAMDRADICLLVVDASVGVTE 276 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL 171 DQ + + ++ + ++L K D + T ++ + Sbjct: 277 QDQKLANMAVERGCALVLLLNKWDLIDSETKRDEV 311 >gi|78212431|ref|YP_381210.1| GTP-binding protein Era [Synechococcus sp. CC9605] gi|78196890|gb|ABB34655.1| GTP-binding protein Era [Synechococcus sp. CC9605] Length = 311 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 18/134 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N LV K +A TS T++ + + L + M LVD Sbjct: 15 IALIGRPNVGKSTLVNQLVGEK-VAITSPVAQTTRN------RLRAILTTEVAQMVLVDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI---DQDVFSFLDKK 148 PG K G +V+ S RS + V L++ G ++ D + + L ++ Sbjct: 68 PGI------HKPHHLLGERLVK--SARSAIGEVDLVVLLLEGCERPGRGDAFIVNLLQQQ 119 Query: 149 AVSYQIVLTKIDKL 162 ++ + L K DKL Sbjct: 120 SLPVLVALNKWDKL 133 >gi|166030494|ref|ZP_02233323.1| hypothetical protein DORFOR_00155 [Dorea formicigenerans ATCC 27755] gi|166029746|gb|EDR48503.1| hypothetical protein DORFOR_00155 [Dorea formicigenerans ATCC 27755] Length = 428 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 13/137 (9%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I G+ N GKSS+IN L +NLA S+ G T V K L L Sbjct: 7 PSAERLHIGIFGKRNAGKSSVINALTG-QNLAIVSDIKGTTTD---PVLKSMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + ++D PG + D G L I + + L+ID G+ + D+ + + Sbjct: 61 PVVIIDTPGL------DDDADILGKLRIQKAYQMLNKTDIAILVIDGTVGMTEEDKKILT 114 Query: 144 FLDKKAVSYQIVLTKID 160 + K + Y +VL K D Sbjct: 115 RIQDKNIPYIVVLNKAD 131 >gi|51473858|ref|YP_067615.1| GTP-binding protein EngA [Rickettsia typhi str. Wilmington] gi|81692277|sp|Q68W59|DER_RICTY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|51460170|gb|AAU04133.1| probable GTP-binding protein EngA [Rickettsia typhi str. Wilmington] Length = 447 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 18/133 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L N L RK A + PG T+ + +++ K L+D Sbjct: 6 ITLVGRPNVGKSTLFNRLSIRKK-AIVHDLPGVTRD------RKYTDGKIGSFKFLLIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG ++N D+ G ++ ++ + L C L++D R GV D+ + SF+ K Sbjct: 59 PGL------EENPDNMGKRLMEQTTQAILEADLIC--LMVDGRSGVLPDDKLLSSFVRKY 110 Query: 149 AVSYQIVLTKIDK 161 +V+ K +K Sbjct: 111 NKHCILVVNKCEK 123 >gi|85057390|ref|YP_456306.1| GTP-binding protein Era [Aster yellows witches'-broom phytoplasma AYWB] gi|84789495|gb|ABC65227.1| GTP-binding protein Era [Aster yellows witches'-broom phytoplasma AYWB] Length = 295 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 28/184 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L +K +A TS P T++ + D SN VD Sbjct: 12 IAILGRPNVGKSTLLNALTQQK-VAITSAKPQTTRNKIIGICHD-SN-----AQYIFVDT 64 Query: 92 PG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG Y + K N ++ + + + + + L D + K+ D F KK Sbjct: 65 PGINQYKHLLNQKMN-----NIVFQSIKD---VDLILFLTDSFYHPKEEDLLKIIFQTKK 116 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAI 206 V +V+ KID L + + +I +Y + VIP S++K K L++ I Sbjct: 117 TVF--LVINKIDSLKSKSQIDA------IILSYLNHFSFQTVIPLSAIKAKNTTFLKENI 168 Query: 207 LETI 210 + I Sbjct: 169 YQNI 172 >gi|332879048|ref|ZP_08446757.1| ribosome biogenesis GTPase Der [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682997|gb|EGJ55885.1| ribosome biogenesis GTPase Der [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 437 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSSLIN + + ++A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSLINAFIGEERNIVTDIAGTTRDSIYTRYTKFGF--DFY------- 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++F Sbjct: 227 ---LVDTAGIRRKNKVTEDLEYYS--VMRSIRAIENSDVCILMLDAERGIEAQDLNIFQL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEV 201 + + S +V+ K D + T + + +Y IR+ P + ++ K++ +V Sbjct: 282 IQRNNKSLVVVVNKWDLVENKTTV-VMNEYEYAIRHRMAPFDDFPIIFASALTKQRIFKV 340 Query: 202 LRKA 205 L A Sbjct: 341 LETA 344 >gi|301299471|ref|ZP_07205746.1| ribosome-associated GTPase EngA [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852934|gb|EFK80543.1| ribosome-associated GTPase EngA [Lactobacillus salivarius ACS-116-V-Col5a] Length = 436 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 17/170 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALVD 90 +F GR NVGKSSL+N ++ +N SN G T+ F +D + ++D Sbjct: 178 SFIGRPNVGKSSLVNAILG-ENRVIVSNIEGTTRDAIDTRFETEDGTKY-------TMID 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +N + + L +RS + CV L + +++ D+ V + + Sbjct: 230 TAGIRKKGKVYENTEKYSVLRAMRAIDRSDVVCVVL--NAEEDIREQDKHVAGYAHEAGR 287 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSSVKRK 197 + IV+ K D L +T+ + LIR Y + P V ++ K++ Sbjct: 288 AIVIVVNKWDTLKKD--NKTMSDFENLIRQEFQYLSYAPIVFVSAKTKQR 335 >gi|317153712|ref|YP_004121760.1| GTP-binding proten HflX [Desulfovibrio aespoeensis Aspo-2] gi|316943963|gb|ADU63014.1| GTP-binding proten HflX [Desulfovibrio aespoeensis Aspo-2] Length = 535 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 33/194 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP- 84 KAG P ++ G +N GKS+L+N L K LA F D ++ + P Sbjct: 363 KAGLPIVSLVGYTNAGKSTLLNTLTQSKVLAED----------KLFATLDPTSRRIRFPQ 412 Query: 85 --AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH--GVKQID-- 138 + L D G+ R P +++ L E + + L+ D H +Q++ Sbjct: 413 EREVVLTDTVGF-IRRLPPDLKEAFRA----TLEELESADLLVLVCDAAHPEAEQQVEAV 467 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + + ++ A+ +VL K D+L E+ + + N P IP S++ R Sbjct: 468 RSILADMELDAIPSILVLNKWDRLD--------EEGREAMGNV---FPGGIPASALNRSS 516 Query: 199 IEVLRKAILETINY 212 +E + +AIL I + Sbjct: 517 LEPVVEAILAAIPW 530 >gi|322502346|emb|CBZ37430.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 817 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 37/165 (22%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFF------------VPKDFSNLKN 81 G + GK+SL++ + R + A G TQ + FF + K NL Sbjct: 234 GHVDTGKTSLLDRI--RSTNVQGGEAGGITQQIGATFFPRESLVSATAELIKKHKCNL-- 289 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 N+P + ++D PG+ N+ S G S L++D HG++Q ++ Sbjct: 290 NVPGLLVIDTPGH----ESFTNLRSRGS---------SLCDIAILVVDIMHGLEQQTRES 336 Query: 142 FSFLDKKAVSYQIVLTKIDKL------SPTTAQETLEKTKYLIRN 180 L +K + + L K+D+L Q++LE K +R+ Sbjct: 337 IRLLREKRCPFIVALNKVDRLFDWQPHENMDIQQSLELQKAHVRS 381 >gi|240950442|ref|ZP_04754691.1| putative small GTP-binding domain protein [Actinobacillus minor NM305] gi|240295025|gb|EER45886.1| putative small GTP-binding domain protein [Actinobacillus minor NM305] Length = 298 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 15/138 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSLIN +V K + +T G T+ ++ ++ N ++ + Sbjct: 36 PRIGVMGKSGAGKSSLINAIVG-KQVCKTGGVGGCTRTFQ----EEVISMGNR--SLIFM 88 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PG ++A +N + Y + + L + +I + D+ +++L K+ Sbjct: 89 DLPGVAESQA--RNTE----YTQLYQKKIADLDLILWVIKVDDRANKDDEAFYNWLTKQY 142 Query: 150 VSYQI--VLTKIDKLSPT 165 QI VL++ DK P+ Sbjct: 143 KKEQILFVLSQCDKAEPS 160 >gi|223994459|ref|XP_002286913.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220978228|gb|EED96554.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 287 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 P + G NVGKS+LIN L+ +K ART+N PG T+ L + Sbjct: 129 PLRVGIIGFPNVGKSALINRLLGKKR-ARTANTPGITRSLQWI 170 >gi|307264991|ref|ZP_07546552.1| small GTP-binding protein [Thermoanaerobacter wiegelii Rt8.B1] gi|326390092|ref|ZP_08211654.1| small GTP-binding protein [Thermoanaerobacter ethanolicus JW 200] gi|306919976|gb|EFN50189.1| small GTP-binding protein [Thermoanaerobacter wiegelii Rt8.B1] gi|325993957|gb|EGD52387.1| small GTP-binding protein [Thermoanaerobacter ethanolicus JW 200] Length = 407 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 26/187 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + IA GR N GKSSLIN L N++ +A S+ G T S LP Sbjct: 5 PTSSRLHIALFGRRNAGKSSLINALTNQE-VALVSDIAGTTTD-------PVSKAMEILP 56 Query: 85 A--MALVDMPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDV 141 + ++D G +V G L V+ E + L+ID GV + ++ + Sbjct: 57 IGPVVIIDTAGL-------DDVGPLGELRVKKTYEVLNKTDLAILVIDGTEGVTEFEEKI 109 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + +K + V+ K D LS + + E K L + ++I S+ ++GIE Sbjct: 110 LQIITEKNIPVVGVINKKD-LSNYSQLQKKEWEKRL-------NLKLIEVSARNKEGIEE 161 Query: 202 LRKAILE 208 L+ I++ Sbjct: 162 LKMMIIK 168 >gi|284924491|emb|CBG37625.1| putative ATP/GTP-binding protein [Escherichia coli 042] Length = 290 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMIIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHP-VVAVSACT 202 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 203 GWELDTLVSALMTAL 217 >gi|260858014|ref|YP_003231905.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O26:H11 str. 11368] gi|300920484|ref|ZP_07136914.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 115-1] gi|257756663|dbj|BAI28165.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O26:H11 str. 11368] gi|300412513|gb|EFJ95823.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 115-1] gi|323155450|gb|EFZ41631.1| selenocysteine-specific translation elongation factor [Escherichia coli EPECa14] Length = 614 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L +VLTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVVLTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|227549322|ref|ZP_03979371.1| GTP-binding protein EngA [Corynebacterium lipophiloflavum DSM 44291] gi|227078641|gb|EEI16604.1| GTP-binding protein EngA [Corynebacterium lipophiloflavum DSM 44291] Length = 497 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 11/134 (8%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT-QHLNFFVPKDFSNLKNNLPAM 86 GP +A GR NVGKSSL+N L +R N + N G T ++ + D + K Sbjct: 233 GPRRVAIVGRPNVGKSSLLNKL-SRSNRSVVDNVAGTTVDPVDELIQLDGALWK------ 285 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D G + + + L R E + + CV +LID + + DQ V S + Sbjct: 286 -FIDTAGLRKKVKNARGHEYYASLRTRGTIEAAEV-CV-VLIDASQEISEQDQRVISMVL 342 Query: 147 KKAVSYQIVLTKID 160 + + I K D Sbjct: 343 EAGKAMVICFNKWD 356 >gi|154417092|ref|XP_001581567.1| Elongation factor Tu GTP binding domain containing protein [Trichomonas vaginalis G3] gi|121915795|gb|EAY20581.1| Elongation factor Tu GTP binding domain containing protein [Trichomonas vaginalis G3] Length = 684 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 27/146 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVPKDFS---------- 77 P G + GK+ +++ + R + + A G TQ + +F + Sbjct: 91 PICVIMGHVDTGKTKILDKI--RHSNIQDGEAGGITQQIGATYFPESEIKRRTQFFKGPF 148 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 L+ N+P + ++D PG+ +S+ L R S L+ID HGV+ Sbjct: 149 KLEYNIPGLLIIDTPGH----------ESFSNLRSRG---SSLCDIAILVIDIMHGVENQ 195 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLS 163 + L K V + I L KID+LS Sbjct: 196 TLESLQMLVSKKVPFIIALNKIDRLS 221 >gi|51598763|ref|YP_072951.1| GTP-binding protein EngA [Borrelia garinii PBi] gi|81825627|sp|Q661B2|DER_BORGA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|51573334|gb|AAU07359.1| GTP-binding protein [Borrelia garinii PBi] Length = 433 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 14/145 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF--SNLKNNLPAMAL 88 ++ G+ N GKS+LIN L + ++ S+ PG T +DF + L N + Sbjct: 175 KVGIIGKPNSGKSTLINYLSGNE-ISIVSDQPGTT--------RDFIKTKLTRNGKVFEI 225 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + + R L + V+LLID + D+ + ++ KK Sbjct: 226 IDTAGIRRRARVNEVVEYYS--VNRALKVIDIVDIVFLLIDVEEELTSQDKKIAHYVTKK 283 Query: 149 AVSYQIVLTKIDKLSPTTAQ-ETLE 172 IV +K D L + ETL+ Sbjct: 284 GKGIIIVFSKWDLLEESKGYFETLK 308 >gi|193068472|ref|ZP_03049434.1| selenocysteine-specific translation elongation factor [Escherichia coli E110019] gi|192958123|gb|EDV88564.1| selenocysteine-specific translation elongation factor [Escherichia coli E110019] Length = 614 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L +VLTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVVLTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|295132650|ref|YP_003583326.1| GTP-binding protein EngA [Zunongwangia profunda SM-A87] gi|294980665|gb|ADF51130.1| GTP-binding protein EngA [Zunongwangia profunda SM-A87] Length = 434 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 24/181 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ N L+ R+ A + G T+ ++ K N +N +L+D Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRRE-AIVDSVSGVTRDRHY--GKSDWNGRN----FSLIDT 57 Query: 92 PGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 GY G + +D L + + ++D G+ +D+DV L K Sbjct: 58 GGYVIGSDDVFEAEIDKQVELAI------GEADAIIFMVDVESGITPMDEDVAILLRKVN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D + LE + Y E P +S G L A++E+ Sbjct: 112 KPVFLAVNKVDN------NKRLENA---VEFYALGLGEYFPIASTNGSGTGDLLDAVIES 162 Query: 210 I 210 + Sbjct: 163 L 163 >gi|237734921|ref|ZP_04565402.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229382249|gb|EEO32340.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 395 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 31/190 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I F G+ N GKS+LIN VN++ ++ S+ PG T P + + L Sbjct: 8 PGANRLHIGFFGKRNSGKSALINAFVNQE-VSIVSSEPGTTTD-----PVYKAMEIDGLG 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL---IVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD G+ ++ + G L + SE+ + +L + R +++D Sbjct: 62 PCLLVDTAGF-------DDIGTLGQLRNDKTKKASEK--IDIAIILFNDRKICQELDW-- 110 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV-IPTSSVKRKGIE 200 + + +K + +V++K D L++ L++ A E + SS+ ++GI+ Sbjct: 111 YHYFKEKHIPTILVISKAD----------LQRNDNLLKKVTEATSETPLLISSLTKQGIK 160 Query: 201 VLRKAILETI 210 L++ +LE + Sbjct: 161 ELQEKLLEKV 170 >gi|328770293|gb|EGF80335.1| hypothetical protein BATDEDRAFT_1375 [Batrachochytrium dendrobatidis JAM81] Length = 468 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G NVGKSS +N LV K +A + PG+T+H D + L D Sbjct: 291 IGFVGYPNVGKSSTLNALVGAKKVA-VGSTPGKTKHFQTIHMSD---------KLVLCDC 340 Query: 92 PG 93 PG Sbjct: 341 PG 342 >gi|260870321|ref|YP_003236723.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O111:H- str. 11128] gi|257766677|dbj|BAI38172.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O111:H- str. 11128] gi|323179444|gb|EFZ65011.1| selenocysteine-specific translation elongation factor [Escherichia coli 1180] Length = 617 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L +VLTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVVLTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|291613920|ref|YP_003524077.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Sideroxydans lithotrophicus ES-1] gi|291584032|gb|ADE11690.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Sideroxydans lithotrophicus ES-1] Length = 124 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 10/95 (10%) Query: 2 VSHTIFTKSAWI----FLRGVPEIGLLPKAGPPEIAFSGR-SNVGKSSLINILVNRKNLA 56 + H F S + F GV +GL P G P+++F G +VG I+++V A Sbjct: 5 IQHATFLTSDLVRSRAFYEGV--LGLHPNPGRPQMSFEGAWYDVGPGQQIHLMVLPDPEA 62 Query: 57 RTSNAP--GRTQHLNFFVPKDFSNLKNNLPAMALV 89 P GR +H+ V DF+ LKN L A + Sbjct: 63 GLQRPPHGGRDRHVALAV-NDFTQLKNRLDAAGIA 96 >gi|146098136|ref|XP_001468333.1| translation initiation factor if-2 [Leishmania infantum] gi|134072700|emb|CAM71417.1| putative translation initiation factor IF-2 [Leishmania infantum JPCM5] Length = 817 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 37/165 (22%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFF------------VPKDFSNLKN 81 G + GK+SL++ + R + A G TQ + FF + K NL Sbjct: 234 GHVDTGKTSLLDRI--RSTNVQGGEAGGITQQIGATFFPRESLVSATAELIKKHKCNL-- 289 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 N+P + ++D PG+ N+ S G S L++D HG++Q ++ Sbjct: 290 NVPGLLVIDTPGH----ESFTNLRSRGS---------SLCDIAILVVDIMHGLEQQTRES 336 Query: 142 FSFLDKKAVSYQIVLTKIDKL------SPTTAQETLEKTKYLIRN 180 L +K + + L K+D+L Q++LE K +R+ Sbjct: 337 IRLLREKRCPFIVALNKVDRLFDWQPHENMDIQQSLELQKAHVRS 381 >gi|126135082|ref|XP_001384065.1| hypothetical protein PICST_77411 [Scheffersomyces stipitis CBS 6054] gi|126091263|gb|ABN66036.1| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 653 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 10/63 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I G NVGKSS IN LV K ++ S PG+T+H N P + L D Sbjct: 342 QIGLVGYPNVGKSSTINALVGSKKVS-VSATPGKTKHFQTI---------NLSPEVVLCD 391 Query: 91 MPG 93 PG Sbjct: 392 CPG 394 >gi|115489608|ref|NP_001067291.1| Os12g0618300 [Oryza sativa Japonica Group] gi|77557083|gb|ABA99879.1| expressed protein [Oryza sativa Japonica Group] gi|113649798|dbj|BAF30310.1| Os12g0618300 [Oryza sativa Japonica Group] gi|125537429|gb|EAY83917.1| hypothetical protein OsI_39140 [Oryza sativa Indica Group] gi|125580093|gb|EAZ21239.1| hypothetical protein OsJ_36891 [Oryza sativa Japonica Group] Length = 598 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K T + PG+T+H + + + L D Sbjct: 316 VGFVGYPNVGKSSTINALVGEKKTGVT-HTPGKTKHFQTLIISE---------ELTLCDC 365 Query: 92 PG 93 PG Sbjct: 366 PG 367 >gi|32491325|ref|NP_871579.1| hypothetical protein WGLp576 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166532|dbj|BAC24722.1| b2511 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 456 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 12/132 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA GR N GKS+L+N ++ R+N + SN+PG T+ + +S N + Sbjct: 194 PKIAIIGRPNSGKSTLMNCIL-RQNRSTVSNSPGTTKDV------LYSLYSNKEKTYLFI 246 Query: 90 DMPGYGYARAPKKN-VDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G KKN V +I L+ + L+ID G+ + D +++ K Sbjct: 247 DTAGL----VKKKNFVHINKSVIKNTLNVIKKIDVSILVIDSCVGITKQDLFFLNYILKY 302 Query: 149 AVSYQIVLTKID 160 S I + K+D Sbjct: 303 NKSLIIAVNKLD 314 >gi|167037775|ref|YP_001665353.1| GTP-binding protein Era [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039985|ref|YP_001662970.1| GTP-binding protein Era [Thermoanaerobacter sp. X514] gi|256751969|ref|ZP_05492839.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus CCSD1] gi|300914075|ref|ZP_07131391.1| GTP-binding protein Era [Thermoanaerobacter sp. X561] gi|307724692|ref|YP_003904443.1| GTP-binding protein Era [Thermoanaerobacter sp. X513] gi|320116190|ref|YP_004186349.1| GTP-binding protein Era [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226741400|sp|B0KA54|ERA_THEP3 RecName: Full=GTPase Era gi|226741401|sp|B0K708|ERA_THEPX RecName: Full=GTPase Era gi|166854225|gb|ABY92634.1| GTP-binding protein Era [Thermoanaerobacter sp. X514] gi|166856609|gb|ABY95017.1| GTP-binding protein Era [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749174|gb|EEU62208.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus CCSD1] gi|300889010|gb|EFK84156.1| GTP-binding protein Era [Thermoanaerobacter sp. X561] gi|307581753|gb|ADN55152.1| GTP-binding protein Era [Thermoanaerobacter sp. X513] gi|319929281|gb|ADV79966.1| GTP-binding protein Era [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 302 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 23/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N ++ K +A TS P T++ + L + + VD Sbjct: 8 VALVGRTNVGKSTLLNAILQEK-IAITSPKPQTTRNTIRGI------LTTDEYQVIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIV-RYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + + + R L E + + +I+ V D+ + L + Sbjct: 61 PG---IHKPKSKLSEFMIEVAKRTLKE---VDLILYMIEPDTEVGPGDRYIIEHLKEVDT 114 Query: 151 SYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID + +ET++ K +Y ++ V+ S+++ K I++L++ I+ Sbjct: 115 PVILVVNKIDLVPEKRVEETIKIFKEQYEFKD-------VVAISAIENKNIDLLKEKIV 166 >gi|302790107|ref|XP_002976821.1| hypothetical protein SELMODRAFT_105942 [Selaginella moellendorffii] gi|300155299|gb|EFJ21931.1| hypothetical protein SELMODRAFT_105942 [Selaginella moellendorffii] Length = 471 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM--A 87 P + GR NVGKSSL N LV+RK A + P + V +D L + Sbjct: 2 PSVIILGRPNVGKSSLYNRLVHRKE-AIVYDTP------DSHVTRDIREGSAKLSDLRFK 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 + D G + + + GL +L T LID R GV +D++ + K Sbjct: 55 VFDSAGLETSEEGETVLARTTGLTATFL---RTCHAALFLIDGRAGVSPLDKEAVMWFRK 111 Query: 148 KAVSYQIVL 156 ++ +VL Sbjct: 112 LNLNLPVVL 120 >gi|298246134|ref|ZP_06969940.1| ribosome-associated GTPase EngA [Ktedonobacter racemifer DSM 44963] gi|297553615|gb|EFH87480.1| ribosome-associated GTPase EngA [Ktedonobacter racemifer DSM 44963] Length = 474 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 13/133 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKSSL+N ++ N + S+ PG T+ +F + K + LV Sbjct: 191 PRIAIVGRPNVGKSSLLNAILG-VNRSIVSDIPGTTRDA-IDTELEFGDQK-----IKLV 243 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDK 147 D G V+ + L S R+ RC +LID G+ D + + + Sbjct: 244 DTAGIRRRGRVGVGVEKYSVL----RSTRAIERCDVALMLIDASEGLTAQDTHIAGTIHE 299 Query: 148 KAVSYQIVLTKID 160 +V+ K D Sbjct: 300 MGKGVIVVVNKWD 312 >gi|295094896|emb|CBK83987.1| ribosome-associated GTPase EngA [Coprococcus sp. ART55/1] Length = 440 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 21/139 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L K ++ + PG T+ + D + L N L+ Sbjct: 4 PIVAIVGRPNVGKSTLFNVLAGEK-ISIVQDTPGVTRDRIY---ADINWLDYNF---TLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P+ + +I++ + E++ T + + D R G+ D V Sbjct: 57 DTGGI----EPESD-----NIILKSMREQAEIAIETADVILFMTDVRQGMVDDDAKVADM 107 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L + +V+ K+D Sbjct: 108 LRRSKKPIVLVVNKVDSFE 126 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 11/157 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L+ + S+ G T+ D ++N + Sbjct: 178 PRIAIIGKPNVGKSSIINKLLGEDRVI-VSDIAGTTRD-----AVDTEIVRNG-REYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + I+R +S L+ID G+ D + + Sbjct: 231 DTAGLRRKSKIKEDIERYS--IIRTVSAVERCNVAVLVIDATEGITDQDAKIAGIAHDRG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 I + K D + +T+ K IRN + P Sbjct: 289 KGMIIAVNKWDAIEKN--DKTIYKFTEEIRNKLSYMP 323 >gi|259090130|pdb|3A1W|A Chain A, Crystal Structue Of The G Domain Of T. Maritima Feob Iron Iransporter Length = 168 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 37/186 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT--QHLNFFVPKDFSNLKNNLPAMAL 88 ++A +G NVGK+SL N L K +N PG T + F K ++ + L Sbjct: 7 KVALAGCPNVGKTSLFNALTGTKQ--YVANWPGVTVEKKEGVFTYKGYT--------INL 56 Query: 89 VDMPG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D+PG GY+ +K I R + V L+ D + +Q ++ L Sbjct: 57 IDLPGTYSLGYSSIDEK--------IARDYLLKGDADLVILVADSVNP----EQSLYLLL 104 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP---TSSVKRKGIEVL 202 + + +++L TA + +KT I Y IP TSSV +G+E L Sbjct: 105 EILEMEKKVILA-------MTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEEL 157 Query: 203 RKAILE 208 ++ I+E Sbjct: 158 KEKIVE 163 >gi|78484970|ref|YP_390895.1| small GTP-binding protein domain-containing protein [Thiomicrospira crunogena XCL-2] gi|78363256|gb|ABB41221.1| GTP-binding protein [Thiomicrospira crunogena XCL-2] Length = 480 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 9/132 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN ++ + + + PG T+ + +VP + L+D Sbjct: 183 VAVIGRPNVGKSTLINRMIGEERVV-AFDMPGTTRD-SIYVP-----FERQGELYTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + K+ ++ + IV+ + + V L++D G+ D + + Sbjct: 236 AGVRRRKNIKEKIEKFS--IVKAIEAMESSNVVVLVVDGSEGITDQDLTLLGLALESGRG 293 Query: 152 YQIVLTKIDKLS 163 I + K D L+ Sbjct: 294 LVIAINKWDNLT 305 >gi|67619293|ref|XP_667638.1| translation initiation factor if-2, 73082-68138 [Cryptosporidium hominis TU502] gi|54658791|gb|EAL37408.1| translation initiation factor if-2, 73082-68138 [Cryptosporidium hominis] Length = 661 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 13/137 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVPKDFSNLKNNLPAMA 87 P G + GK+ L++ + RK + + A G TQ + +F P+ S + A Sbjct: 69 PVCCILGHVDTGKTKLLDKM--RKTNVQDNEAGGITQQIGATYFPPEMLSEQVKKVEADF 126 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFL 145 + +PG + +D+ G L R + C L++D HG++ ++ L Sbjct: 127 ELQIPGLLF-------IDTPGHESFNNLRSRGSSLCDIAVLVVDIMHGLEPQTRESIGLL 179 Query: 146 DKKAVSYQIVLTKIDKL 162 + + I L KID+L Sbjct: 180 RSRKCPFIIALNKIDRL 196 >gi|167765447|ref|ZP_02437560.1| hypothetical protein BACSTE_03837 [Bacteroides stercoris ATCC 43183] gi|167697075|gb|EDS13654.1| hypothetical protein BACSTE_03837 [Bacteroides stercoris ATCC 43183] Length = 437 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++FS Sbjct: 226 --YLVDTAGIRKKNKVNEDLEYYS--VIRSIRSIENSDVCILMLDATRGIESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEV 201 + K + +V+ K D + T + ++ + IRN P + ++ K++ ++V Sbjct: 282 IQKNSKGLVVVVNKWDLVEDKTVK-VMKTFENAIRNRFAPFVDFPIIFASALTKQRILKV 340 Query: 202 LRKA 205 L +A Sbjct: 341 LEEA 344 >gi|260685218|ref|YP_003216503.1| tRNA modification GTPase TrmE [Clostridium difficile CD196] gi|260688877|ref|YP_003220011.1| tRNA modification GTPase TrmE [Clostridium difficile R20291] gi|260211381|emb|CBA67036.1| putative tRNA modification GTPase [Clostridium difficile CD196] gi|260214894|emb|CBE07700.1| putative tRNA modification GTPase [Clostridium difficile R20291] Length = 462 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N ++ +N A ++ PG T+ V ++F N+K +P + +VD G Sbjct: 231 GKPNVGKSSLLNSILG-ENRAIVTDIPGTTRD----VIEEFVNIK-GIP-LKIVDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R V+ G + + ++ + +++D + + D ++ L K IV Sbjct: 283 --RDTDDIVEKIG--VEKSKESFTSADLIVMVLDASRKLSEEDIEILEKLKDKQT---IV 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L + L +E + KY+ N +I S+++++GIE L+ I Sbjct: 336 LLNKNDLKQEIEEEKI--LKYVENN------SIIKISALQQEGIEELQDKI 378 >gi|115940910|ref|XP_001175696.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 462 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 28/156 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS--NLKNNLPAMAL--VDM 91 G S +GKS+LIN L + + PG +Q + V + S NLK N + L VD Sbjct: 38 GESGLGKSTLINSLF--LTDIYSGDFPGPSQRIKKTVKVETSQANLKENGVQLRLTIVDT 95 Query: 92 PGYGYARAPKKNVDSWGGLI-------VRYLSERSTLR-----------CVYLLIDCRHG 133 PG+G N + W ++ YL+ S + C+Y + HG Sbjct: 96 PGFG---DQVDNSNCWAPILDHIDSKFEEYLNSESRVNRYSIPDKRVQCCLYFIAPSGHG 152 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 +K +D + L K V+ ++ K D L+P +E Sbjct: 153 LKPLDIEFMKRLHDK-VNIIPLIAKADTLTPEECRE 187 >gi|169765113|ref|XP_001817028.1| large subunit GTPase 1 [Aspergillus oryzae RIB40] gi|83764882|dbj|BAE55026.1| unnamed protein product [Aspergillus oryzae] Length = 658 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 20/89 (22%) Query: 13 IFLRGVPEIGLLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +FL P+ LP+ PE I G NVGKSS IN L+ K ++ S PG+ Sbjct: 323 LFLSNTPDT--LPENDDPENPRKQKTVIGLVGYPNVGKSSTINALLGAKKVS-VSATPGK 379 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 T+H P + L D PG Sbjct: 380 TKHFQTLYLS---------PEIMLCDCPG 399 >gi|314933657|ref|ZP_07841022.1| ribosome-associated GTPase EngA [Staphylococcus caprae C87] gi|313653807|gb|EFS17564.1| ribosome-associated GTPase EngA [Staphylococcus caprae C87] Length = 436 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 11/145 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ V ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEERVI-VSNVAGTTRDA---VDTEYSYEGQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS + V ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERSNV--VLVVIDAEQGIIEQDKRVAGYAHEEGKAIVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRN 180 + K D + + +T++K +RN Sbjct: 293 VNKWDTVEKDS--KTMKKFTEDVRN 315 >gi|77919007|ref|YP_356822.1| GTP-binding protein EngA [Pelobacter carbinolicus DSM 2380] gi|123574290|sp|Q3A4Q5|DER_PELCD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|77545090|gb|ABA88652.1| putative Era-like GTP-binding protein [Pelobacter carbinolicus DSM 2380] Length = 439 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 11/155 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSLIN ++ + L +N T + P + N + L+D Sbjct: 178 LAVIGRPNVGKSSLINRMIGVERL--VANPTAGTTRDSIDTPFVY-----NKKSYVLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ ++ + +++ L V ++ID GV + D V + ++ + Sbjct: 231 AGIRRKGRVQQKLEKYS--VIQSLKAMERAHVVLVVIDAEEGVTEQDLTVAGYALERGRA 288 Query: 152 YQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTA 184 +V+ K D ++ T ++ EK ++ + P A Sbjct: 289 VLLVVNKWDLVTKDHGTMKQYTEKVRHAFKFLPFA 323 >gi|323343319|ref|ZP_08083546.1| ribosome-associated GTPase EngA [Prevotella oralis ATCC 33269] gi|323095138|gb|EFZ37712.1| ribosome-associated GTPase EngA [Prevotella oralis ATCC 33269] Length = 458 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 15/180 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNR-KNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P A GR NVGKSS+IN + +N+ R F F L Sbjct: 197 PRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRFDKFGFD--------FYL 248 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++++ + ++R + L+ID G++ D ++F + K Sbjct: 249 VDTAGIRRKNKVTEDLEFYS--VMRSIRSIENSDVCILMIDATRGIEAQDMNIFQLIQKN 306 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEVLRKA 205 S +V+ K D L Q ++ + IR P + ++ K++ +VL A Sbjct: 307 NKSLVVVVNKWD-LVENKDQNVIKTFENAIRERMAPFVDFPIIFASALTKQRIFKVLETA 365 >gi|284921995|emb|CBG35073.1| putative GTP-binding protein [Escherichia coli 042] Length = 303 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 50 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 102 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 103 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 156 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 157 HQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 213 Query: 196 RKGIEV 201 R G E+ Sbjct: 214 RTGWEL 219 >gi|187928156|ref|YP_001898643.1| GTP-binding protein EngA [Ralstonia pickettii 12J] gi|238691801|sp|B2U9V3|DER_RALPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|187725046|gb|ACD26211.1| small GTP-binding protein [Ralstonia pickettii 12J] Length = 447 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 11/175 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + DF +N P L+D Sbjct: 183 IAIVGRPNVGKSTLVNALIGEERVI-AFDMPGTTRDAIYV---DFE--RNGKP-YTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V L++D + + D + F+ + + Sbjct: 236 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + K D L+ + ++ A+ I S+ +R GI L K++ Sbjct: 294 LVIGVNKWDGLTGHARDRIKHDMERKLQFLSFANVHYI--SAKERTGIGALMKSV 346 >gi|308176963|ref|YP_003916369.1| GTP-binding protein EngA [Arthrobacter arilaitensis Re117] gi|307744426|emb|CBT75398.1| GTP-binding protein EngA [Arthrobacter arilaitensis Re117] Length = 510 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 15/26 (57%), Positives = 19/26 (73%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLIN 47 G++P GP +A GR NVGKSSL+N Sbjct: 240 GMIPSGGPRRVALIGRPNVGKSSLLN 265 >gi|295111440|emb|CBL28190.1| iron-only hydrogenase maturation protein HydF [Synergistetes bacterium SGP1] Length = 407 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 20/137 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +AF G N GKSSL+N V ++L+ S+ G T V K L L + ++D Sbjct: 14 VAFFGVRNAGKSSLVNA-VTGQDLSIVSDVGGTTTD---PVRKAMELLP--LGPVLIIDT 67 Query: 92 PGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 PG +D G L + R L + L D R + + D + + L + Sbjct: 68 PG----------LDDEGALGALRVERTLRILAETDAAVLAADARRPLTEHDHRLLALLKE 117 Query: 148 KAVSYQIVLTKIDKLSP 164 +A+ + I TK D L P Sbjct: 118 RAIPFLIARTKADLLRP 134 >gi|32398799|emb|CAD98509.1| putative translation initiation factor if-2, 73082-68138, probable [Cryptosporidium parvum] Length = 836 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 13/137 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVPKDFSNLKNNLPAMA 87 P G + GK+ L++ + RK + + A G TQ + +F P+ S + A Sbjct: 244 PVCCILGHVDTGKTKLLDKM--RKTNVQDNEAGGITQQIGATYFPPEMLSEQVKKVEADF 301 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFL 145 + +PG + +D+ G L R + C L++D HG++ ++ L Sbjct: 302 ELQIPGLLF-------IDTPGHESFNNLRSRGSSLCDIAVLVVDIMHGLEPQTRESIGLL 354 Query: 146 DKKAVSYQIVLTKIDKL 162 + + I L KID+L Sbjct: 355 RSRKCPFIIALNKIDRL 371 >gi|78778577|ref|YP_396689.1| tRNA modification GTPase TrmE [Prochlorococcus marinus str. MIT 9312] gi|123554736|sp|Q31CZ2|MNME_PROM9 RecName: Full=tRNA modification GTPase mnmE gi|78712076|gb|ABB49253.1| tRNA modification GTPase trmE [Prochlorococcus marinus str. MIT 9312] Length = 460 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 16/80 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAMAL 88 IA G++NVGKSSL+N+L +K A +N PG T+ +N + N++P M + Sbjct: 230 IALIGKTNVGKSSLLNLLA-KKEKAIVTNIPGTTRDVIEVNLTI--------NDIP-MKI 279 Query: 89 VDMPGYGYARAPKKNVDSWG 108 +D G R + ++S G Sbjct: 280 IDTAGI---RETHEQIESIG 296 >gi|332280241|ref|ZP_08392654.1| YeeP protein [Shigella sp. D9] gi|332102593|gb|EGJ05939.1| YeeP protein [Shigella sp. D9] Length = 303 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 77/195 (39%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 50 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 102 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 103 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 156 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 157 HQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSART 215 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 216 GWELDTLVSALMTAL 230 >gi|167756284|ref|ZP_02428411.1| hypothetical protein CLORAM_01817 [Clostridium ramosum DSM 1402] gi|167703692|gb|EDS18271.1| hypothetical protein CLORAM_01817 [Clostridium ramosum DSM 1402] Length = 395 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 31/190 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I F G+ N GKS+LIN VN++ ++ S+ PG T P + + L Sbjct: 8 PGANRLHIGFFGKRNSGKSALINAFVNQE-VSIVSSEPGTTTD-----PVYKAMEIDGLG 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL---IVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD G+ ++ + G L + SE+ + +L + R +++D Sbjct: 62 PCLLVDTAGF-------DDIGTLGQLRNDKTKKASEK--IDIAIILFNDRKICQELDW-- 110 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV-IPTSSVKRKGIE 200 + + +K + +V++K D L++ L++ A E + SS+ ++GI+ Sbjct: 111 YHYFKEKHIPTILVISKAD----------LQRNDNLLKKITEATSETPLLISSLTKQGIK 160 Query: 201 VLRKAILETI 210 L++ +LE + Sbjct: 161 ELQEKLLEKV 170 >gi|156101936|ref|XP_001616661.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148805535|gb|EDL46934.1| hypothetical protein, conserved [Plasmodium vivax] Length = 769 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 9/62 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS+IN LV K ++ S PG+T+H F + +L D Sbjct: 530 VGFIGFPNVGKSSIINSLVGLKKVS-VSRQPGKTKH--------FQTIPLKRHGFSLCDC 580 Query: 92 PG 93 PG Sbjct: 581 PG 582 >gi|19173350|ref|NP_597153.1| GTP BINDING PROTEIN [Encephalitozoon cuniculi GB-M1] gi|19170939|emb|CAD26329.1| GTP BINDING PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 410 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F G NVGKSS IN ++N K + + S PG+T+H+ Sbjct: 246 VGFVGYPNVGKSSTINSIMNSKRV-KVSQTPGKTKHIQ 282 >gi|315223115|ref|ZP_07864983.1| ribosome-associated GTPase EngA [Streptococcus anginosus F0211] gi|315187804|gb|EFU21551.1| ribosome-associated GTPase EngA [Streptococcus anginosus F0211] Length = 436 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ V D N Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDAIDTVFTD-----NEGQEF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK ++N+ Sbjct: 284 EAGKGIIIVVNKWD---------TLEKDNKTMQNW 309 >gi|269302630|gb|ACZ32730.1| putative GTP-binding protein Era [Chlamydophila pneumoniae LPCoLN] Length = 485 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 19/145 (13%) Query: 25 PKAGPP--EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLN-FFVPKDFSNLK 80 P+ P +IA GR NVGKSS+IN L+N + N PG T+ +++ + KD L Sbjct: 216 PQQAPKTLKIALIGRPNVGKSSIINGLLNEERCI-IDNTPGTTRDNIDILYSHKDRQYL- 273 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQID 138 +D G ++ K +++ W I +E++ R L+ID + + Sbjct: 274 -------FIDTAGLRKMKSVKNSIE-W---ISSSRTEKAISRADICLLVIDATQKLSSYE 322 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLS 163 + + S + K+ + I++ K D L Sbjct: 323 KRILSLISKRKKPHIILINKWDLLE 347 >gi|72391314|ref|XP_845951.1| translation initiation factor IF-2 [Trypanosoma brucei TREU927] gi|62175903|gb|AAX70027.1| translation initiation factor IF-2, putative [Trypanosoma brucei] gi|70802487|gb|AAZ12392.1| translation initiation factor IF-2, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 787 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 32/184 (17%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP ++ G + GK++L++ L RK + A G TQ++ F K + + Sbjct: 203 PPVVSIMGHVDHGKTTLLDYL--RKTNVASQEAGGITQNVGAFQVKTLGDT-----LVTF 255 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D PG+ ++ + LIV L++ GV+ ++V K Sbjct: 256 IDTPGHAAFTTMREVGATANDLIV-------------LVVSAVDGVQPQTKEVIELAHKS 302 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY------PTAHPEVIPTSSVKRKGIEVL 202 + + + TKID+ Q +E K +R+ + +P + +G+ L Sbjct: 303 GIPFVVACTKIDR------QPRVENVKQQLRDCNVELEEDGGDTQFVPVCARDGRGVPEL 356 Query: 203 RKAI 206 +AI Sbjct: 357 LEAI 360 >gi|15618753|ref|NP_225039.1| GTP-binding protein EngA [Chlamydophila pneumoniae CWL029] gi|15836377|ref|NP_300901.1| GTP-binding protein EngA [Chlamydophila pneumoniae J138] gi|16752195|ref|NP_445562.1| GTP-binding protein EngA [Chlamydophila pneumoniae AR39] gi|33242204|ref|NP_877145.1| GTP-binding protein EngA [Chlamydophila pneumoniae TW-183] gi|8134434|sp|Q9Z762|DER_CHLPN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|4377159|gb|AAD18982.1| GTPase/GTP-binding protein [Chlamydophila pneumoniae CWL029] gi|7189939|gb|AAF38801.1| GTP-binding protein [Chlamydophila pneumoniae AR39] gi|8979218|dbj|BAA99052.1| GTPase/GTP-binding protein [Chlamydophila pneumoniae J138] gi|33236715|gb|AAP98802.1| GTPase/GTP-binding protein [Chlamydophila pneumoniae TW-183] Length = 487 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 19/145 (13%) Query: 25 PKAGPP--EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLN-FFVPKDFSNLK 80 P+ P +IA GR NVGKSS+IN L+N + N PG T+ +++ + KD L Sbjct: 218 PQQAPKTLKIALIGRPNVGKSSIINGLLNEERCI-IDNTPGTTRDNIDILYSHKDRQYL- 275 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQID 138 +D G ++ K +++ W I +E++ R L+ID + + Sbjct: 276 -------FIDTAGLRKMKSVKNSIE-W---ISSSRTEKAISRADICLLVIDATQKLSSYE 324 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLS 163 + + S + K+ + I++ K D L Sbjct: 325 KRILSLISKRKKPHIILINKWDLLE 349 >gi|320547399|ref|ZP_08041687.1| ribosome-associated GTPase EngA [Streptococcus equinus ATCC 9812] gi|320447944|gb|EFW88699.1| ribosome-associated GTPase EngA [Streptococcus equinus ATCC 9812] Length = 436 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + +F++ + Sbjct: 172 PDIIKFSLIGRPNVGKSSLINAILGEERVI-ASPIAGTTRDA---IDTNFTDSEGQ--EY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++I+ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRSMRAIDRSDIVLMVINAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D T+EK Y + + Sbjct: 284 EAGKGIIIVVNKWD---------TIEKNNYTVAKW 309 >gi|309704622|emb|CBJ03972.1| putative MMR_HS1 domain protein [Escherichia coli ETEC H10407] Length = 290 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHP-VVAVSART 202 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 203 GWELDTLVSALMTAL 217 >gi|289662800|ref|ZP_06484381.1| GTP-binding protein Era [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 285 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 24/179 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALVDMPG 93 GR NVGKS+L N LV K ++ SN P T+H + P + LVD PG Sbjct: 3 GRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIA--------TFPEGQLVLVDTPG 53 Query: 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF--LDKKAVS 151 R K+ ++ V + R +L V + + ++D +F L V Sbjct: 54 L--HREQKRAMNR-----VMNRAARGSLEGVDAAVLVIEAGRWDEEDTLAFRVLSDAQVP 106 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D+L TA R + HP S++KRKG+E L +L+ + Sbjct: 107 VVLVVNKVDRLKDKTALFPFLAQVSEGRTFAAVHP----ISALKRKGLEALVADLLKLV 161 >gi|126701303|ref|YP_001090200.1| tRNA modification GTPase TrmE [Clostridium difficile 630] gi|255102894|ref|ZP_05331871.1| tRNA modification GTPase TrmE [Clostridium difficile QCD-63q42] gi|255308714|ref|ZP_05352885.1| tRNA modification GTPase TrmE [Clostridium difficile ATCC 43255] gi|123362962|sp|Q181S7|MNME_CLOD6 RecName: Full=tRNA modification GTPase mnmE gi|115252740|emb|CAJ70585.1| transfer RNA modification GTPase MnmE [Clostridium difficile] Length = 459 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N ++ +N A ++ PG T+ V ++F N+K +P + +VD G Sbjct: 228 GKPNVGKSSLLNSILG-ENRAIVTDIPGTTRD----VIEEFVNIK-GIP-LKIVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R V+ G + + ++ + +++D + + D ++ L K IV Sbjct: 280 --RDTDDIVEKIG--VEKSKESFTSADLIVMVLDASRKLSEEDIEILEKLKDKQT---IV 332 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L + L +E + KY+ N +I S+++++GIE L+ I Sbjct: 333 LLNKNDLKQEIEEEKI--LKYVENN------SIIKISALQQEGIEELQDKI 375 >gi|110802832|ref|YP_699904.1| tRNA modification GTPase TrmE [Clostridium perfringens SM101] gi|123047103|sp|Q0SPQ3|MNME_CLOPS RecName: Full=tRNA modification GTPase mnmE gi|110683333|gb|ABG86703.1| tRNA modification GTPase TrmE [Clostridium perfringens SM101] Length = 458 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 16/126 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+N +N A ++ G T+ V +++ NL + +P + LVD G Sbjct: 231 GKPNVGKSSLLNALLN-ENRAIVTDIAGTTRD----VIEEYINL-DGIP-VRLVDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R + V+ G + + + + V L++D + + D+++ ++ D+K Y + Sbjct: 283 --RETEDVVEKIG--VEKSKEKINEADLVILMLDTSRELDEEDKEIIDYIKDRK---YIV 335 Query: 155 VLTKID 160 +L K+D Sbjct: 336 LLNKVD 341 >gi|322380446|ref|ZP_08054647.1| GTP-binding protein EngA [Helicobacter suis HS5] gi|321147128|gb|EFX41827.1| GTP-binding protein EngA [Helicobacter suis HS5] Length = 348 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 13/182 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L+ ++ A S PG T P D S +N + VD Sbjct: 88 QVGIIGRVNVGKSSLLNALIEQER-ALVSEIPGTT-----IDPVDQSISHHN-QEICFVD 140 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R+ + ++ + R + E+S + L++D ++D+ + S + + Sbjct: 141 TAGLR-QRSKVEGLEKFALDRTRKVLEKSHI--ALLVLDASTPFVELDEKIASLAGEYNL 197 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D + + +E K+ + A ++ TS++ ++ I ++ ILE Sbjct: 198 GVIVVFNKWD-IKHAGFETIIEDFKHKFKFLQYA--PLLTTSAISKRHILQIKDKILEVY 254 Query: 211 NY 212 Y Sbjct: 255 AY 256 >gi|315452739|ref|YP_004073009.1| GTP-binding protein engA [Helicobacter felis ATCC 49179] gi|315131791|emb|CBY82419.1| GTP-binding protein engA [Helicobacter felis ATCC 49179] Length = 435 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 19/197 (9%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L+ P + P ++ GR NVGKSSL+N LV ++ A S G T P Sbjct: 162 LQESPTQEISPLVSAIQVGIIGRVNVGKSSLLNALVQQER-ALVSEVAGTT-----IDPV 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D ++ ++ + VD G R+ + ++ + + E+S + L++D Sbjct: 216 D-QHISHHGQEICFVDTAGL-RQRSKIQGLEKYALDRTTKVLEQSQI--AILVLDVSVPF 271 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNY-PTAHPEVIPT 191 +D+ + + +DK + +V K D + + +E K K+ +Y PT I Sbjct: 272 VDLDEKIAALVDKHRLGVVVVFNKWD-IRHANFEAIMESFKHKFKFLHYAPT-----ITA 325 Query: 192 SSVKRKGIEVLRKAILE 208 S++ ++ +E ++ ILE Sbjct: 326 SALDKRHVEKIKDKILE 342 >gi|291563937|emb|CBL42753.1| GTP-binding protein Era [butyrate-producing bacterium SS3/4] Length = 300 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 27/182 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TS P T++ V D + +D Sbjct: 10 VTLIGRPNVGKSTLMNHLIGQK-IAITSEKPQTTRNRIQTVYTDEHG------QIIFLDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG A+ + G +V TLR + L++ + +Q + L Sbjct: 63 PGIHKAK------NKLGEYMVNVAEH--TLREVDVILWLVEPGTYIGSGEQHILKVLQTV 114 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVLRKAI 206 +V+ KID T +E + KT I Y A+ EVIP S++K+ + L I Sbjct: 115 KTPVILVINKID----TVKKEDILKT---IETYKDAYHFKEVIPVSAMKKTNTDTLIHTI 167 Query: 207 LE 208 + Sbjct: 168 FQ 169 >gi|254977337|ref|ZP_05273809.1| tRNA modification GTPase TrmE [Clostridium difficile QCD-66c26] gi|255094668|ref|ZP_05324146.1| tRNA modification GTPase TrmE [Clostridium difficile CIP 107932] gi|255316421|ref|ZP_05358004.1| tRNA modification GTPase TrmE [Clostridium difficile QCD-76w55] gi|255519081|ref|ZP_05386757.1| tRNA modification GTPase TrmE [Clostridium difficile QCD-97b34] gi|255652264|ref|ZP_05399166.1| tRNA modification GTPase TrmE [Clostridium difficile QCD-37x79] gi|306521979|ref|ZP_07408326.1| tRNA modification GTPase TrmE [Clostridium difficile QCD-32g58] Length = 459 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N ++ +N A ++ PG T+ V ++F N+K +P + +VD G Sbjct: 228 GKPNVGKSSLLNSILG-ENRAIVTDIPGTTRD----VIEEFVNIK-GIP-LKIVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R V+ G + + ++ + +++D + + D ++ L K IV Sbjct: 280 --RDTDDIVEKIG--VEKSKESFTSADLIVMVLDASRKLSEEDIEILEKLKDKQT---IV 332 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 L + L +E + KY+ N +I S+++++GIE L+ I Sbjct: 333 LLNKNDLKQEIEEEKI--LKYVENN------SIIKISALQQEGIEELQDKI 375 >gi|160939128|ref|ZP_02086479.1| hypothetical protein CLOBOL_04022 [Clostridium bolteae ATCC BAA-613] gi|158438091|gb|EDP15851.1| hypothetical protein CLOBOL_04022 [Clostridium bolteae ATCC BAA-613] Length = 442 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 11/169 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN LV +N S+ G T+ D + P + + Sbjct: 178 PRIAVVGKPNVGKSSIINKLVG-ENRVIVSDIAGTTRD-----AVDTEVIHEGTPYV-FI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R +S V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKSKIKEELERYS--IIRTVSAVERADVVVVVIDATEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + + K D + T T E K K ++ P A I ++ +R Sbjct: 289 KGIIVAVNKWDAIEKTDKTIYEYTRKIKEVLSFIPYAEYLFISAATGQR 337 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 21/139 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N++ ++ + PG T+ + D+ N+ L+ Sbjct: 4 PIVAIVGRPNVGKSTLFNVIAG-DTISIVKDTPGVTRD-RIYADCDWLNMN-----FTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-----STLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P +I+ + E+ ST + ++D R G+ D V Sbjct: 57 DTGGI----EPDSK-----DIILSQMREQAEIAISTADVIIFIVDVRQGLVDSDSKVADL 107 Query: 145 LDKKAVSYQIVLTKIDKLS 163 L K + + K+D ++ Sbjct: 108 LRKSHKPVVLAVNKVDSVA 126 >gi|302698119|ref|XP_003038738.1| hypothetical protein SCHCODRAFT_80890 [Schizophyllum commune H4-8] gi|300112435|gb|EFJ03836.1| hypothetical protein SCHCODRAFT_80890 [Schizophyllum commune H4-8] Length = 600 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G+ NVGKSSL+N L + R S PG+T+H F+ D + LVD Sbjct: 319 IGLIGQPNVGKSSLLNALFGASKV-RASKTPGKTKHYQTLFLSPD----------IRLVD 367 Query: 91 MPG 93 PG Sbjct: 368 CPG 370 >gi|257093699|ref|YP_003167340.1| GTP-binding protein EngA [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046223|gb|ACV35411.1| small GTP-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 492 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 9/139 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ ++A GR NVGKS+LIN L+ + + PG T+ + DF Sbjct: 171 PESDVVKVAIVGRPNVGKSTLINALLGEDRVI-AFDQPGTTRDA---IEVDFERGGKK-- 224 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + ++ + +++ L + V L++D R + + D + +F Sbjct: 225 -YTLIDTAGLRRRGRVFETIEKFS--VIKTLQAVEDAQVVILVLDARQDIAEQDAHIAAF 281 Query: 145 LDKKAVSYQIVLTKIDKLS 163 + + + + + K D L Sbjct: 282 IRESGRALVVAVNKWDGLD 300 >gi|296136228|ref|YP_003643470.1| ribosome-associated GTPase EngA [Thiomonas intermedia K12] gi|295796350|gb|ADG31140.1| ribosome-associated GTPase EngA [Thiomonas intermedia K12] Length = 457 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR NVGKS+L+N LV + + + PG T+ VP + K L+D Sbjct: 194 LAIAGRPNVGKSTLVNALVGEERVI-AFDMPGTTRD-AIEVPFERDGRK-----FILIDT 246 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 G + V+ + +++ L V LL+D GV D + SF Sbjct: 247 AGLRRKGKVFEAVEKFS--VIKTLQAIEQANVVVLLLDATEGVSDQDAHIASF 297 >gi|238503594|ref|XP_002383030.1| ribosome biogenesis GTPase Lsg1, putative [Aspergillus flavus NRRL3357] gi|220690501|gb|EED46850.1| ribosome biogenesis GTPase Lsg1, putative [Aspergillus flavus NRRL3357] Length = 658 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 20/89 (22%) Query: 13 IFLRGVPEIGLLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +FL P+ LP+ PE I G NVGKSS IN L+ K ++ S PG+ Sbjct: 323 LFLSNTPDT--LPENDDPENPRKQKTVIGLVGYPNVGKSSTINALLGAKKVS-VSATPGK 379 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 T+H P + L D PG Sbjct: 380 TKHFQTLYLS---------PEIMLCDCPG 399 >gi|299771613|ref|YP_003733639.1| GTP-binding protein EngA [Acinetobacter sp. DR1] gi|298701701|gb|ADI92266.1| GTP-binding protein EngA [Acinetobacter sp. DR1] Length = 469 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 9/138 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 KA +A GR NVGKS+L+N L+ + + PG T+ + ++P + + Sbjct: 173 KATGLRLAIIGRPNVGKSTLVNRLLGEDRVV-AFDQPGTTRD-SIYIP-----FERDGRQ 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ ++ + IV+ L V +++D R GV + D + + Sbjct: 226 YTLIDTAGVRRKGKVEEMIEKFS--IVKTLQAIKDAHVVVVVLDAREGVVEQDLHLIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLS 163 + + I + K D ++ Sbjct: 284 LEAGRAMMIAINKWDNMT 301 >gi|294340463|emb|CAZ88844.1| GTPase involved in ribosome synthesis and maintenance [Thiomonas sp. 3As] Length = 465 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 9/113 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR NVGKS+L+N LV + + + PG T+ VP + K L+D Sbjct: 202 LAIAGRPNVGKSTLVNALVGEERVI-AFDMPGTTRD-AIEVPFERDGRK-----FILIDT 254 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 G + V+ + +++ L V LL+D GV D + SF Sbjct: 255 AGLRRKGKVFEAVEKFS--VIKTLQAIEQANVVVLLLDATEGVSDQDAHIASF 305 >gi|282895353|ref|ZP_06303554.1| tRNA modification GTPase TrmE [Raphidiopsis brookii D9] gi|281199604|gb|EFA74465.1| tRNA modification GTPase TrmE [Raphidiopsis brookii D9] Length = 460 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 31/194 (15%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G L ++G ++A GR NVGKSSL+N ++ + A ++ PG T+ + + + Sbjct: 217 EKGELLRSGL-KVAIVGRPNVGKSSLLNAW-SQCDRAIVTDLPGTTRDI-----VESQLV 269 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 +P + ++D G R V+ G + R ++ V L ID + G + D+ Sbjct: 270 VGGIP-IQVLDTAGI---RETVDQVEKIG--VERSRQAANSADLVLLTIDAKAGWQSGDE 323 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 +++ + + + +V+ KID + T+EK + T++ + + Sbjct: 324 EIYQQVKHRPLI--LVINKIDLVEDLGGICSPTMEKA--------------VKTAAGQNR 367 Query: 198 GIEVLRKAILETIN 211 GIE L +AILE + Sbjct: 368 GIEDLEQAILEVVQ 381 >gi|229829014|ref|ZP_04455083.1| hypothetical protein GCWU000342_01099 [Shuttleworthia satelles DSM 14600] gi|229792177|gb|EEP28291.1| hypothetical protein GCWU000342_01099 [Shuttleworthia satelles DSM 14600] Length = 281 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 10/65 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +G NVGKS+LIN L R ART N PG T+ K + +L++N+ L Sbjct: 120 PVRAMIAGIPNVGKSTLINSLAGRAA-ARTGNKPGVTKG------KQWIHLRDNID---L 169 Query: 89 VDMPG 93 +D PG Sbjct: 170 LDTPG 174 >gi|195652095|gb|ACG45515.1| GTP binding protein [Zea mays] Length = 596 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K T + PG+T+H + + + L D Sbjct: 314 VGFVGYPNVGKSSTINALVGEKRTGVT-HTPGKTKHFQTLIISE---------ELTLCDC 363 Query: 92 PG 93 PG Sbjct: 364 PG 365 >gi|148269793|ref|YP_001244253.1| tRNA modification GTPase TrmE [Thermotoga petrophila RKU-1] gi|205829183|sp|A5IKF4|MNME_THEP1 RecName: Full=tRNA modification GTPase mnmE gi|147735337|gb|ABQ46677.1| tRNA modification GTPase trmE [Thermotoga petrophila RKU-1] Length = 450 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 23/172 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKS+L+N L+N ++ A ++ PG T+ V + ++ L +VD G Sbjct: 218 GKPNVGKSTLLNRLLN-EDRAIVTDIPGTTRD----VISEEIVIRGIL--FRIVDTAG-- 268 Query: 96 YARAPKKN-VDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 R+ + V+ G I R L E V ++D + + D+ + + K Y + Sbjct: 269 -VRSETNDLVERLG--IERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNK--RYLV 323 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ K+D + +E I+N ++ S++K +G+E L +AI Sbjct: 324 VINKVDVVEKINEEE--------IKNKLGTDRHMVKISALKGEGLEKLEEAI 367 >gi|54035350|gb|AAH83888.1| Gnl1 protein [Rattus norvegicus] Length = 480 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK + S PG T++ +F+ P Sbjct: 230 KDGVVTIGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TP 278 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 279 SVKLCDCPG 287 >gi|332707443|ref|ZP_08427492.1| GTP-binding protein HflX [Lyngbya majuscula 3L] gi|332353794|gb|EGJ33285.1| GTP-binding protein HflX [Lyngbya majuscula 3L] Length = 542 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 38/195 (19%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD--------FSNLKN 81 P +A G +N GKS+L+N L N + T++ F D ++ Sbjct: 369 PTVAVVGYTNAGKSTLLNTLTNAE--VYTAD--------QLFATLDPTTRRLPIIDSVTG 418 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV-KQIDQD 140 AM L+D G+ + P VDS+ L E + + L+D H + Sbjct: 419 KSSAMLLIDTVGFIH-ELPPPLVDSFRA----TLEEVTEADALLHLVDLSHSAWASHIRS 473 Query: 141 VFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 V L ++ +V KID++ T L K ++ P+ + S+ KR Sbjct: 474 VMGILRDMPITPGPILVVFNKIDQVDSDTL--ALAKEEF---------PQGVFISASKRL 522 Query: 198 GIEVLRKAILETINY 212 G+E LR+ ++E ++Y Sbjct: 523 GLETLRQKLVELVHY 537 >gi|242086310|ref|XP_002443580.1| hypothetical protein SORBIDRAFT_08g021890 [Sorghum bicolor] gi|241944273|gb|EES17418.1| hypothetical protein SORBIDRAFT_08g021890 [Sorghum bicolor] Length = 597 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN LV K T + PG+T+H + + + L D Sbjct: 314 VGFVGYPNVGKSSTINALVGEKRTGVT-HTPGKTKHFQTLIISE---------ELTLCDC 363 Query: 92 PG 93 PG Sbjct: 364 PG 365 >gi|241662759|ref|YP_002981119.1| GTP-binding protein EngA [Ralstonia pickettii 12D] gi|240864786|gb|ACS62447.1| small GTP-binding protein [Ralstonia pickettii 12D] Length = 447 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 11/175 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + DF +N P L+D Sbjct: 183 IAIVGRPNVGKSTLVNALIGEERVI-AFDMPGTTRDAIYV---DFE--RNGKP-YTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V L++D + + D + F+ + + Sbjct: 236 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + K D L+ + ++ A+ I S+ +R GI L K++ Sbjct: 294 LVIGVNKWDGLTGHARDRIKHDMERKLQFLSFANVHYI--SAKERTGIGALMKSV 346 >gi|167749633|ref|ZP_02421760.1| hypothetical protein EUBSIR_00591 [Eubacterium siraeum DSM 15702] gi|167657386|gb|EDS01516.1| hypothetical protein EUBSIR_00591 [Eubacterium siraeum DSM 15702] gi|291530788|emb|CBK96373.1| GTP-binding protein Era [Eubacterium siraeum 70/3] gi|291557707|emb|CBL34824.1| GTP-binding protein Era [Eubacterium siraeum V10Sc8a] Length = 302 Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 24/173 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDFSNLKNNLPAMALVD 90 +A +GR N GKS+L N LV K +A S+ P T+ +N + K + +D Sbjct: 9 VAIAGRPNAGKSTLTNYLVGEK-IAIVSDKPQTTRTRINGVLTKGETQY-------VFID 60 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + +++ + E T + + ++ D + I+ ++ + Sbjct: 61 TPGMHKAK------NKLSDQMLKSIRESVTDVDVILMMADATKKISPIEHNLIDSFKDRK 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIE 200 +++ K+D + + E L LI+ Y + E+IP S +R G+E Sbjct: 115 TDVVLLINKVDLVKDKS--ELLS----LIKEYSELYDFKEIIPISVRQRIGVE 161 >gi|325567648|ref|ZP_08144315.1| tRNA modification GTPase TrmE [Enterococcus casseliflavus ATCC 12755] gi|325159081|gb|EGC71227.1| tRNA modification GTPase TrmE [Enterococcus casseliflavus ATCC 12755] Length = 481 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ R+ A ++ G T+ V +++ N++ +P + L+D Sbjct: 247 AIIGRPNVGKSSLLNHLL-REEKAIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 299 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R + + L+++ G+ Q D+ L+ A S Sbjct: 300 GI---RETEDVVEKIG--VERSRKALAEAELILLVLNQSEGLTQEDK---QLLELTAGSR 351 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +I+L L P A L + Y P + S + +G++ L +AI Sbjct: 352 RIILLNKTDLEPKLAPAELAQ-------YAADEP-IFSVSVLTNEGLDQLEQAI 397 >gi|315122354|ref|YP_004062843.1| GTP-binding protein Era [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495756|gb|ADR52355.1| GTP-binding protein Era [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 310 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 18/150 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G +N GKS+L+N V A+ S + Q V S + +D Sbjct: 23 VALVGATNAGKSTLVNKFVG----AKVSIVTHKVQTTRSIVRGIVSEKD---VQVVFLDT 75 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG A+ DS+ +++R ST++ V+L+ID G++ D+ + K+ Sbjct: 76 PGIFKAK------DSYHKMMIRL--SWSTVKHADIVFLVIDSNRGLQPDVHDILKEIGKR 127 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + ++L KID + P E E L+ Sbjct: 128 SGRLVLILNKIDCVKPERLLEQAEIINKLV 157 >gi|313893405|ref|ZP_07826977.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str. F0412] gi|313442046|gb|EFR60466.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str. F0412] Length = 444 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN++ ++ + PG T+ +F D L ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKR-ISIVEDIPGVTRDRIYF---DAEWLNREF---TMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L E + + ++D + G+ D++V + L Sbjct: 57 DTGGIEFITENSHVIPKMMRLQAELAIEEAD--VILFVVDGKQGIVPADEEVGNILRASG 114 Query: 150 VSYQIVLTKIDKLS 163 +V+ KID ++ Sbjct: 115 KPVVLVVNKIDSVN 128 >gi|261329440|emb|CBH12421.1| translation initiation factor IF-2, putative [Trypanosoma brucei gambiense DAL972] Length = 787 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 32/184 (17%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP ++ G + GK++L++ L RK + A G TQ++ F K + + Sbjct: 203 PPVVSIMGHVDHGKTTLLDYL--RKTNVASQEAGGITQNVGAFQVKTLGDT-----LVTF 255 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D PG+ ++ + LIV L++ GV+ ++V K Sbjct: 256 IDTPGHAAFTTMREVGATANDLIV-------------LVVSAVDGVQPQTKEVIELAHKS 302 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY------PTAHPEVIPTSSVKRKGIEVL 202 + + + TKID+ Q +E K +R+ + +P + +G+ L Sbjct: 303 GIPFVVACTKIDR------QPRVENVKQQLRDCNVELEEDGGDTQFVPVCARDGRGVPEL 356 Query: 203 RKAI 206 +AI Sbjct: 357 LEAI 360 >gi|317182147|dbj|BAJ59931.1| GTP-binding protein EngA [Helicobacter pylori F57] Length = 461 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILVGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKTRHIDEIKHKIIE 365 >gi|269218471|ref|ZP_06162325.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 848 str. F0332] gi|269211582|gb|EEZ77922.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 848 str. F0332] Length = 560 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 15/72 (20%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG----RTQHLNFFVPKDFSNLKNN 82 A PP +A GR NVGKS+L+N +V R+ +A + PG R + + +DF+ Sbjct: 119 AAPPVLAVVGRPNVGKSTLVNRIVGRR-VAVVQDVPGVTRDRVGYPASWAGRDFT----- 172 Query: 83 LPAMALVDMPGY 94 LVD G+ Sbjct: 173 -----LVDTGGW 179 >gi|227513321|ref|ZP_03943370.1| GTP-binding protein EngA [Lactobacillus buchneri ATCC 11577] gi|227083194|gb|EEI18506.1| GTP-binding protein EngA [Lactobacillus buchneri ATCC 11577] Length = 435 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 22/189 (11%) Query: 20 EIGLLPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF- 76 E G +P +I FS GR NVGKSSL+N ++ +N S+ G T+ + F Sbjct: 166 ETGNVPN---DDIRFSIIGRPNVGKSSLVNAILG-ENRVIVSDVAGTTRDA---IDTRFE 218 Query: 77 -SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 N+K +VD G +N + + ++R + + +I+ G++ Sbjct: 219 ADNIK-----FTMVDTAGIRKRGKVYENTERYS--VMRAMKAIDQSDVILFVINAEEGIR 271 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSS 193 + D+ V + + + V+ K D L T T + + LIRN A+ +I S+ Sbjct: 272 EQDKKVAGYAHEAGKAIITVVNKWDTLKKT--NHTQQDFETLIRNEFQYMAYSPIIFVSA 329 Query: 194 VKRKGIEVL 202 ++ IE L Sbjct: 330 KTKQRIEQL 338 >gi|78776875|ref|YP_393190.1| translation initiation factor IF-2 [Sulfurimonas denitrificans DSM 1251] gi|123768647|sp|Q30SS6|IF2_SULDN RecName: Full=Translation initiation factor IF-2 gi|78497415|gb|ABB43955.1| bacterial translation initiation factor 2 (bIF-2) [Sulfurimonas denitrificans DSM 1251] Length = 874 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 43/169 (25%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP I G + GK+SL++ + RK A G TQH+ + ++ N A+ Sbjct: 376 PPVITIMGHVDHGKTSLLDAI--RKAKVTQDEAGGITQHIGAYT------IEQNGKAITF 427 Query: 89 VDMPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D PG+ +++ ++ D + +++ GVK ++V + Sbjct: 428 LDTPGHAAFSQMRQRGTD--------------VTDIIIIVVAADDGVKPQTEEVIKLAKE 473 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 V + + K+DK PTA+P+++ +R Sbjct: 474 SKVPVIVAVNKMDK--------------------PTANPDMVKAQMAER 502 >gi|83748442|ref|ZP_00945464.1| Era [Ralstonia solanacearum UW551] gi|207725214|ref|YP_002255610.1| GTP-binding protein [Ralstonia solanacearum MolK2] gi|207743589|ref|YP_002259981.1| gtp-binding protein era homolog [Ralstonia solanacearum IPO1609] gi|83724853|gb|EAP72009.1| Era [Ralstonia solanacearum UW551] gi|206590448|emb|CAQ37410.1| gtp-binding protein era homolog [Ralstonia solanacearum MolK2] gi|206594988|emb|CAQ61915.1| gtp-binding protein era homolog [Ralstonia solanacearum IPO1609] Length = 315 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 28/183 (15%) Query: 27 AGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 AG PE +A GR NVGKS+L+N LV +K ++ TS T+H + ++ Sbjct: 16 AGVPEGFRCGMVAIVGRPNVGKSTLMNALVGQK-VSITSRKAQTTRH-------RITGIQ 67 Query: 81 NNLPA-MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC-RHGVKQID 138 A VD PG+ A N L S +++ V +++ R+G D Sbjct: 68 TTDDAQFVFVDTPGFQTRHATALN----RSLNRAVTSTLTSVDAVLFVVEAGRYGPD--D 121 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKR 196 V S L ++ +++ K+D+L T E + +++ P E++P S+ R Sbjct: 122 AKVLSLLPRET-PVILIVNKVDRLDAYTRAEMV---AVFLQDMAQVFPFKEIVPMSAKNR 177 Query: 197 KGI 199 I Sbjct: 178 DDI 180 >gi|300858946|ref|YP_003783929.1| putative GTP-binding protein [Corynebacterium pseudotuberculosis FRC41] gi|300686400|gb|ADK29322.1| putative GTP-binding protein [Corynebacterium pseudotuberculosis FRC41] gi|302206647|gb|ADL10989.1| GTP-binding protein era-like protein [Corynebacterium pseudotuberculosis C231] gi|302331196|gb|ADL21390.1| GTP-binding protein era-like protein [Corynebacterium pseudotuberculosis 1002] gi|308276890|gb|ADO26789.1| GTP-binding protein era-like protein [Corynebacterium pseudotuberculosis I19] Length = 305 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 I+F GR N GKS+L N LV K +A T+N P T+H Sbjct: 15 ISFVGRPNTGKSTLTNALVGEK-IAITANQPETTRH 49 >gi|269215396|ref|ZP_06159250.1| ribosome-associated GTPase EngA [Slackia exigua ATCC 700122] gi|269130883|gb|EEZ61958.1| ribosome-associated GTPase EngA [Slackia exigua ATCC 700122] Length = 440 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 13/169 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKSSL N L+ K + S+ G T+ + +++ +VD Sbjct: 183 VAIIGRPNAGKSSLTNRLIG-KERSIVSDVAGTTRDAI------DTTIEHEGTFYTIVDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++V+ +G VR + L++D G+ DQ V + ++ + Sbjct: 236 AGLRRKAQIDQDVEYYG--FVRAMRAIDRADVALLVVDATLGLTDQDQRVAGYAHERGCA 293 Query: 152 YQIVLTKIDKLSP----TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 I+L K D + +E +E+ ++ P + SV R Sbjct: 294 LAILLNKRDAVESGDTLNALREDIEERMNFVKYAPVLSISALTGKSVDR 342 >gi|237751075|ref|ZP_04581555.1| GTP-binding protein Era [Helicobacter bilis ATCC 43879] gi|229373520|gb|EEO23911.1| GTP-binding protein Era [Helicobacter bilis ATCC 43879] Length = 300 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 43/174 (24%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ GR+N GKS+L+N LV + + ++ VP + S+ + L +D Sbjct: 6 ISVIGRTNAGKSTLLNNLVKSPIALVSKKINATRKRMDIIVPFEDSDYNSQL---IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF--------- 142 PG L E L Y+L + + V D VF Sbjct: 63 PG---------------------LHESKKLLNEYMLQEAKKAVGDSDLSVFVAVASPKKS 101 Query: 143 ------SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +FLD+ + ++L KID L+ E LE K Y + +IP Sbjct: 102 EILHYKNFLDQHDKKHIVLLNKIDTLNKNELLECLESYK----QYQNKNLGIIP 151 >gi|90075074|dbj|BAE87217.1| unnamed protein product [Macaca fascicularis] Length = 686 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK ++ S PG T++ +F+ P Sbjct: 357 KDGVVTIGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TP 405 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 406 SVKLCDCPG 414 >gi|321311009|ref|YP_004193338.1| GTP binding protein EngA [Mycoplasma haemofelis str. Langford 1] gi|319802853|emb|CBY93499.1| GTP binding protein EngA [Mycoplasma haemofelis str. Langford 1] Length = 436 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 10/145 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKSSL+N L+ R+ + S G T+ + DFS N L+D Sbjct: 176 KIAIIGRPNVGKSSLVNSLLKRERVL-VSEVAGTTRDA---IDLDFS---FNGKRYTLID 228 Query: 91 MPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 P G R + VD ++R + + ++D + ++D+ V + K Sbjct: 229 TP--GIKRHSQMRVDEKEKYSVLRAQKAIARANTLIFMLDISEDLSELDERVGGLIFKAN 286 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKT 174 + IV K D + T + + +T Sbjct: 287 IPTLIVANKWDLVERTHSNRSYLET 311 >gi|194374333|dbj|BAG57062.1| unnamed protein product [Homo sapiens] Length = 262 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK + S PG T++ +F+ P++ L D Sbjct: 18 IGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TPSVKLCD 66 Query: 91 MPG 93 PG Sbjct: 67 CPG 69 >gi|312373077|gb|EFR20901.1| hypothetical protein AND_18324 [Anopheles darlingi] Length = 678 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 27/151 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN--LKNNLPAMAL--VDM 91 G S +GKS+LIN + ++ T PG ++ + V + + LK N + L VD Sbjct: 329 GESGLGKSTLINSMF-LSDIYHTEQHPGPSKRIKKTVAVESTKVLLKENGVNLTLTVVDT 387 Query: 92 PGYGYARAPKKNVDSWGGLI-------VRYLSERSTLR-----------CVYLLIDCRHG 133 PG+G A N + W ++ YL+ S + C+Y + HG Sbjct: 388 PGFGDA---VDNSNCWLPIVDFVESKYEEYLTAESRVHRIAIPDTRVHVCLYFIAPSGHG 444 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 +K +D + L K V+ V+ K D L+P Sbjct: 445 LKPLDIEFMQRLCDK-VNIIPVIAKADTLTP 474 >gi|306812029|ref|ZP_07446235.1| hypothetical protein ECNC101_08969 [Escherichia coli NC101] gi|305854533|gb|EFM54970.1| hypothetical protein ECNC101_08969 [Escherichia coli NC101] Length = 290 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|302835503|ref|XP_002949313.1| hypothetical protein VOLCADRAFT_47891 [Volvox carteri f. nagariensis] gi|300265615|gb|EFJ49806.1| hypothetical protein VOLCADRAFT_47891 [Volvox carteri f. nagariensis] Length = 84 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 28/95 (29%) Query: 39 NVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYAR 98 NVGKSS +N L+ K +A +S+ PGRT+H + P++ L D PG + Sbjct: 2 NVGKSSTMNALLGAKRVAVSSH-PGRTKHYQTHM---------MCPSLMLCDCPGLVF-- 49 Query: 99 APKKNVDSWGGL---------------IVRYLSER 118 P+ +V + + +VRYL+ER Sbjct: 50 -PRLDVSLYMQVLFGSYPIARCRDPYAVVRYLAER 83 >gi|294791776|ref|ZP_06756924.1| ribosome-associated GTPase EngA [Veillonella sp. 6_1_27] gi|294793637|ref|ZP_06758774.1| ribosome-associated GTPase EngA [Veillonella sp. 3_1_44] gi|294455207|gb|EFG23579.1| ribosome-associated GTPase EngA [Veillonella sp. 3_1_44] gi|294457006|gb|EFG25368.1| ribosome-associated GTPase EngA [Veillonella sp. 6_1_27] Length = 444 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN++ ++ + PG T+ +F D L ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKR-ISIVEDIPGVTRDRIYF---DAEWLNREF---TMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L E + + ++D + G+ D++V + L Sbjct: 57 DTGGIEFITDNSHVIPKMMRLQAELAIEEAD--VILFVVDGKQGIVPADEEVANILRASG 114 Query: 150 VSYQIVLTKIDKLS 163 +V+ KID ++ Sbjct: 115 KPVVLVVNKIDSVN 128 Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 9/129 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N L+ + + + A ++ + + N K L+D Sbjct: 181 VAIIGRPNVGKSSLTNALLGQDRVIVSDVAGTTRDSIDTYWTHE--NQK-----FVLIDT 233 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ V+ + IVR L V L++D + GV + D+ + + + Sbjct: 234 AGMRRKSKIEEAVERYS--IVRSLRSVDRADIVVLVLDAQDGVTEQDKKIAGYAYEAGKG 291 Query: 152 YQIVLTKID 160 IV+ K D Sbjct: 292 VVIVVNKWD 300 >gi|288818595|ref|YP_003432943.1| selenocysteine-specific translation elongation factor [Hydrogenobacter thermophilus TK-6] gi|288787995|dbj|BAI69742.1| selenocysteine-specific translation elongation factor [Hydrogenobacter thermophilus TK-6] gi|308752186|gb|ADO45669.1| selenocysteine-specific translation elongation factor [Hydrogenobacter thermophilus TK-6] Length = 572 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 23/178 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKDFSNLKNNLPAMALVD 90 +A +G + GK+SLI L + + R R ++ F DF ++ + ++D Sbjct: 6 LATAGHVDHGKTSLIKALTS-IDTDRLPEEKERGMSIDIGFAFLDFDGVR-----VEIID 59 Query: 91 MPGYG-YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 +PG+ + R ++ GL S+++ V L+ID G ++ + Sbjct: 60 IPGHERFIR------NAIAGL--------SSVQGVLLVIDASEGPMPQTEEHIKLMKSFG 105 Query: 150 VSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + +VLTKID+ + E+T+ L+ P SSV++ G+E L++ I Sbjct: 106 IDHCLVVLTKIDRCEHLLVEIVREETERLLSKEGIKCFGFYPVSSVQKSGLEELKEGI 163 >gi|257875886|ref|ZP_05655539.1| tRNA modification GTPase mnmE [Enterococcus casseliflavus EC20] gi|257810052|gb|EEV38872.1| tRNA modification GTPase mnmE [Enterococcus casseliflavus EC20] Length = 481 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ R+ A ++ G T+ V +++ N++ +P + L+D Sbjct: 247 AIIGRPNVGKSSLLNHLL-REEKAIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 299 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R + + L+++ G+ Q D+ L+ A S Sbjct: 300 GI---RETEDVVEKIG--VERSRKALAEAELILLVLNQSEGLTQEDK---QLLELTAGSR 351 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +I+L L P A L + Y P + S + +G++ L +AI Sbjct: 352 RIILLNKTDLEPKLAPAELAQ-------YAADEP-IFSVSVLTSEGLDQLEQAI 397 >gi|86740164|ref|YP_480564.1| GTP-binding protein EngA [Frankia sp. CcI3] gi|86567026|gb|ABD10835.1| Small GTP-binding protein domain [Frankia sp. CcI3] Length = 487 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 30/147 (20%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG----RTQHLNFFVPKDFSNLK 80 P G P +A GR NVGKS+L+N ++ R+ A + PG R + + + F+ Sbjct: 44 PGIGQPVVAVVGRPNVGKSTLVNRILGRRA-AVVEDVPGVTRDRVAYDAVWSGRRFT--- 99 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVK 135 LVD G+ D+ G + +SE++ T V ++D G Sbjct: 100 -------LVDTGGW--------EPDATG--LAAQVSEQARAALDTADAVLFIVDVVTGAT 142 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKL 162 D+ V L + + +V K+D + Sbjct: 143 DADEAVARVLHRCGLPVILVANKVDDV 169 >gi|38234285|ref|NP_940052.1| GTP-binding protein Era [Corynebacterium diphtheriae NCTC 13129] gi|81829879|sp|Q6NG20|ERA_CORDI RecName: Full=GTPase Era gi|38200548|emb|CAE50243.1| Putative GTP-binding protein [Corynebacterium diphtheriae] Length = 305 Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 I+F GR N GKS+L N LV K +A T+N P T+H Sbjct: 15 ISFVGRPNTGKSTLTNALVGEK-IAITANQPETTRH 49 >gi|313635544|gb|EFS01763.1| tRNA modification GTPase TrmE [Listeria seeligeri FSL N1-067] Length = 457 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ + A ++ G T+ + +++ N++ +P + L+D Sbjct: 223 AIIGRPNVGKSSLLNQLIQEEK-AIVTDIAGTTRD----IIEEYVNVR-GVP-LRLIDTA 275 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S ++ ++L+ + +D F +Y Sbjct: 276 GI---RETEDIVEKIG--VER--SRKALKDADFILLVLNQNEELTIEDEALFEAASGHNY 328 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +VL K D ++ L+ + +R A+P V+ TS +K +G+E L AI Sbjct: 329 VVVLNKTD------LEQKLDIER--VRELAGANP-VVETSLIKDEGLEALEDAI 373 >gi|229087972|ref|ZP_04220079.1| tRNA modification GTPase mnmE [Bacillus cereus Rock3-44] gi|228695341|gb|EEL48219.1| tRNA modification GTPase mnmE [Bacillus cereus Rock3-44] Length = 326 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 92 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 144 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R V ++++ + D+++F + K + Sbjct: 145 GI---RETEDVVERIG--VERSKEMMGQADLVLIVVNYSEALTIEDEELFRAVQGK--DF 197 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D Q +E+ L +I TS ++ KG++ L KAI Sbjct: 198 IVIVNKTD----LPKQIDMERVTKL-----AGDNRIITTSLIEEKGVDELEKAI 242 >gi|212702039|ref|ZP_03310167.1| hypothetical protein DESPIG_00041 [Desulfovibrio piger ATCC 29098] gi|212674554|gb|EEB35037.1| hypothetical protein DESPIG_00041 [Desulfovibrio piger ATCC 29098] Length = 382 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 15/174 (8%) Query: 29 PP--EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 PP +A GR N GKSS+IN L + + + A ++ +D + Sbjct: 117 PPALRLAMLGRPNAGKSSMINALAGEERMIVSDVAGTTRDSVDVRFERDGQD-------Y 169 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL-IDCRHGVKQIDQDVFSFL 145 VD G R K D V + +T V LL +D GV Q D+ + L Sbjct: 170 VFVDTAG---VRRRTKITDIVEKYSVNAALKSTTKADVTLLTLDATEGVSQQDKRLMDLL 226 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 D + + + +++ K D + ++ L+ ++ H ++ S++K G+ Sbjct: 227 DTRKIPFMVLVNKCDLVPAGQLKQLLQNVSEMLAF--CKHVPILTVSALKGTGL 278 >gi|188025698|ref|ZP_02959493.2| hypothetical protein PROSTU_01355 [Providencia stuartii ATCC 25827] gi|188022778|gb|EDU60818.1| hypothetical protein PROSTU_01355 [Providencia stuartii ATCC 25827] Length = 252 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 17/134 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G++ GKSSLIN L + +L+ SN G T+ + + FS NN + VD+PG G Sbjct: 2 GKTGAGKSSLINALF-QSSLSHVSNVSGCTRQV-----QRFSMTMNN-HTLTFVDLPGVG 54 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA----VS 151 + K S L L E L + ++ D+ + FL ++ Sbjct: 55 ESLERDKECHS---LYRNLLPE---LDFIIWVLKADDRAWSSDEQCYHFLTEQCGYHPNR 108 Query: 152 YQIVLTKIDKLSPT 165 + VL + DK+ P Sbjct: 109 FLFVLNQADKIEPC 122 >gi|71982363|ref|NP_001021060.1| hypothetical protein C53H9.2 [Caenorhabditis elegans] gi|28894823|gb|AAO61427.1| Hypothetical protein C53H9.2c [Caenorhabditis elegans] Length = 247 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A P + G NVGKSS IN L K ++ S PG+T+H + D + P Sbjct: 125 PSAKPVMVGMVGYPNVGKSSTINKLAGGKKVS-VSATPGKTRHFQ-TIHIDSQLCLCDCP 182 Query: 85 AMALVDMPGYGYARA 99 + MP + + R+ Sbjct: 183 GLV---MPSFSFGRS 194 >gi|32267038|ref|NP_861070.1| GTP-binding protein EngA [Helicobacter hepaticus ATCC 51449] gi|41017015|sp|Q7VFY6|DER_HELHP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|32263090|gb|AAP78136.1| GTP-binding protein YphC [Helicobacter hepaticus ATCC 51449] Length = 487 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 21/182 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL+N L+ ++ + S G T P D + + VD Sbjct: 205 VGIIGRVNVGKSSLLNALLGKER-SVVSEVAGTT-----IDPVD-DEMDIEGKRVRFVDT 257 Query: 92 PGYGYARAPKKNVDSWG---GLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G RA K WG ++R + + V L++D ++D+ + S + K Sbjct: 258 A--GIRRASK----IWGIEKFALLRTNAALAQSHIVILVLDASESFVELDEKISSLIPKH 311 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKGIEVLRKAIL 207 A+ +VL K DK +E E K +P + V+ S++ + I+ L+K IL Sbjct: 312 ALGVIVVLNKWDK----KHKEYKEIIKEFKHRFPFLSFAPVMTLSALNGRNIDKLKKEIL 367 Query: 208 ET 209 + Sbjct: 368 KV 369 >gi|329962635|ref|ZP_08300583.1| ribosome biogenesis GTPase Der [Bacteroides fluxus YIT 12057] gi|328529666|gb|EGF56564.1| ribosome biogenesis GTPase Der [Bacteroides fluxus YIT 12057] Length = 437 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++FS Sbjct: 226 --YLVDTAGIRKKNKVSEDLEYYS--VIRSIRSIENSDVCILMLDATRGIESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEV 201 + K + +V+ K D + T + ++ + IRN P + ++ K++ ++V Sbjct: 282 IQKNSKGLVVVVNKWDLVQDKTVK-VMKTFEDAIRNRFAPFVDFPIIFASALTKQRILKV 340 Query: 202 LRKA 205 L +A Sbjct: 341 LEEA 344 >gi|319956402|ref|YP_004167665.1| ribosome-associated GTPase enga [Nitratifractor salsuginis DSM 16511] gi|319418806|gb|ADV45916.1| ribosome-associated GTPase EngA [Nitratifractor salsuginis DSM 16511] Length = 462 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 12/130 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N L+ + + S G T P D + + + + VD Sbjct: 200 VAILGRPNVGKSSLLNALLGEER-SVVSEVAGTT-----IDPVDETIIHGDYE-ITFVDT 252 Query: 92 PGYGYARAPKKNVDSWG-GLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R+ ++ + G + L E LLID GV ++D+ + +DK + Sbjct: 253 AGI-RRRSKILGIEKYALGRTEKMLQEAD---IALLLIDATTGVTELDERIAGLIDKYKL 308 Query: 151 SYQIVLTKID 160 IV+ K D Sbjct: 309 GALIVVNKWD 318 >gi|256019137|ref|ZP_05433002.1| hypothetical protein ShiD9_09494 [Shigella sp. D9] Length = 290 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|197303325|ref|ZP_03168365.1| hypothetical protein RUMLAC_02048 [Ruminococcus lactaris ATCC 29176] gi|197297609|gb|EDY32169.1| hypothetical protein RUMLAC_02048 [Ruminococcus lactaris ATCC 29176] Length = 300 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 21/183 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ + + L + VD Sbjct: 10 VTLIGRPNVGKSTLMNHLIGQK-IAITSNKPQTTRN------RIQTVLTTEEGQIVFVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + G +V ++ERS + V L++ + + ++ + L K Sbjct: 63 PGIHKAK------NKLGEYMVN-IAERSLNEVDVVLWLVEPSNFIGAGEKHIIEQLKKVK 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KID + +E L + Y A E++P S+ + L K IL Sbjct: 116 TPVILVINKIDMVK---REEILAFIDTYRKEYDFA--EIVPVSARTGDNTDELVKVILNY 170 Query: 210 INY 212 + Y Sbjct: 171 LPY 173 >gi|114562298|ref|YP_749811.1| GTP-binding protein EngA [Shewanella frigidimarina NCIMB 400] gi|122300418|sp|Q085U2|DER_SHEFN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|114333591|gb|ABI70973.1| small GTP-binding protein [Shewanella frigidimarina NCIMB 400] Length = 488 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+LIN ++ + + + PG T+ + ++P + L Sbjct: 199 PIKLAIIGKPNVGKSTLINRILGEERVV-VYDEPGTTRD-SIYIP-----MSREGREYVL 251 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +++ L V L+ID R G+ + D + F Sbjct: 252 IDTAGVRRRSKVNEVIEKFS--VIKTLKAVEDANVVLLVIDAREGIAEQDLGLLGFTLNA 309 Query: 149 AVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 310 GRALVIAINKWDGID 324 >gi|260435524|ref|ZP_05789494.1| GTP-binding protein Era [Synechococcus sp. WH 8109] gi|260413398|gb|EEX06694.1| GTP-binding protein Era [Synechococcus sp. WH 8109] Length = 311 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 18/134 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N LV K +A TS T++ + + L + M LVD Sbjct: 15 IALIGRPNVGKSTLVNQLVGEK-VAITSPVAQTTRN------RLRAVLTMEVAQMVLVDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI---DQDVFSFLDKK 148 PG K G +V+ S RS + V L++ G ++ D + + L ++ Sbjct: 68 PGI------HKPHHLLGERLVK--SARSAIGEVDLVVLLLEGCERPGRGDAFIVNLLQQQ 119 Query: 149 AVSYQIVLTKIDKL 162 ++ + L K DKL Sbjct: 120 SLPVLVALNKWDKL 133 >gi|225028014|ref|ZP_03717206.1| hypothetical protein EUBHAL_02283 [Eubacterium hallii DSM 3353] gi|224954728|gb|EEG35937.1| hypothetical protein EUBHAL_02283 [Eubacterium hallii DSM 3353] Length = 445 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 11/158 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA G+ N GKSS+IN L+ + + + A ++ + +K N + Sbjct: 183 PKIAVIGKPNAGKSSIINKLLGEERVIVSPVAGTTRDAID-------TTVKRNGQEYVFI 235 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ L+ID G+ + D + ++ Sbjct: 236 DTAGLRRKSKIKEELERYS--IIRTVTAVERCDVAVLIIDATEGITEQDAKIAGIAHERG 293 Query: 150 VSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAH 185 I + K D + TT ++ EK + + P A Sbjct: 294 KGMIIAVNKWDLVEKDNTTMKKFTEKIREKLSYMPYAE 331 >gi|18311637|ref|NP_563571.1| tRNA modification GTPase TrmE [Clostridium perfringens str. 13] gi|110799764|ref|YP_697346.1| tRNA modification GTPase TrmE [Clostridium perfringens ATCC 13124] gi|168207742|ref|ZP_02633747.1| tRNA modification GTPase TrmE [Clostridium perfringens E str. JGS1987] gi|168211557|ref|ZP_02637182.1| tRNA modification GTPase TrmE [Clostridium perfringens B str. ATCC 3626] gi|168214843|ref|ZP_02640468.1| tRNA modification GTPase TrmE [Clostridium perfringens CPE str. F4969] gi|169343475|ref|ZP_02864475.1| tRNA modification GTPase TrmE [Clostridium perfringens C str. JGS1495] gi|182626407|ref|ZP_02954160.1| tRNA modification GTPase TrmE [Clostridium perfringens D str. JGS1721] gi|21363002|sp|Q8XH30|MNME_CLOPE RecName: Full=tRNA modification GTPase mnmE gi|123344426|sp|Q0TLZ4|MNME_CLOP1 RecName: Full=tRNA modification GTPase mnmE gi|18146321|dbj|BAB82361.1| probable thiophen / furan oxidation protein [Clostridium perfringens str. 13] gi|110674411|gb|ABG83398.1| tRNA modification GTPase TrmE [Clostridium perfringens ATCC 13124] gi|169298427|gb|EDS80516.1| tRNA modification GTPase TrmE [Clostridium perfringens C str. JGS1495] gi|170660919|gb|EDT13602.1| tRNA modification GTPase TrmE [Clostridium perfringens E str. JGS1987] gi|170710445|gb|EDT22627.1| tRNA modification GTPase TrmE [Clostridium perfringens B str. ATCC 3626] gi|170713713|gb|EDT25895.1| tRNA modification GTPase TrmE [Clostridium perfringens CPE str. F4969] gi|177908281|gb|EDT70834.1| tRNA modification GTPase TrmE [Clostridium perfringens D str. JGS1721] Length = 458 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 16/126 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+N K A ++ G T+ V +++ NL + +P + LVD G Sbjct: 231 GKPNVGKSSLLNALLNEKR-AIVTDIAGTTRD----VIEEYINL-DGIP-VRLVDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R + V+ G + + + + V L++D + + D+++ ++ D+K Y + Sbjct: 283 --RETEDVVEKIG--VEKSKEKINEADLVILMLDTSRELDEEDKEIIDYIKDRK---YIV 335 Query: 155 VLTKID 160 +L K+D Sbjct: 336 LLNKVD 341 >gi|319793097|ref|YP_004154737.1| GTP-binding protein hsr1-related protein [Variovorax paradoxus EPS] gi|315595560|gb|ADU36626.1| GTP-binding protein HSR1-related protein [Variovorax paradoxus EPS] Length = 469 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 7/74 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK-NNLPAMALVD 90 IA G +N GK+SL+ L R + S PG T+H+ + ++L+ N A+ D Sbjct: 8 IAVVGHTNAGKTSLLRTLTRRVSFGEVSQRPGTTRHV------ESADLEVNGEAAVRFFD 61 Query: 91 MPGYGYARAPKKNV 104 PG A A ++++ Sbjct: 62 TPGLEDAVALREHL 75 >gi|149731497|ref|XP_001499014.1| PREDICTED: large subunit GTPase 1 homolog (S. cerevisiae) [Equus caballus] Length = 659 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 33/167 (19%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 384 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 433 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL-IDCRHG----VKQIDQD 140 + L D PG ++ ++S ++ + C +L ID V + Q+ Sbjct: 434 LCLCDCPGL---------------VMPSFVSTKAEMTCSGILPIDQMRDHVPPVSLVCQN 478 Query: 141 VFSFLDKKAVSYQIVLTKIDK--LSPTTAQETLEKTKYLIRNYPTAH 185 + ++ + I+ + D+ P T++E L Y+ R + TAH Sbjct: 479 IPRYVLEATYGINIIKPREDEDPCRPPTSEELLTAYGYM-RGFMTAH 524 >gi|148543995|ref|YP_001271365.1| GTP-binding protein EngA [Lactobacillus reuteri DSM 20016] gi|184153389|ref|YP_001841730.1| GTP-binding protein EngA [Lactobacillus reuteri JCM 1112] gi|194467923|ref|ZP_03073909.1| small GTP-binding protein [Lactobacillus reuteri 100-23] gi|166920101|sp|A5VJK4|DER_LACRD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|229784134|sp|B2G718|DER_LACRJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|148531029|gb|ABQ83028.1| small GTP-binding protein [Lactobacillus reuteri DSM 20016] gi|183224733|dbj|BAG25250.1| GTP-binding protein [Lactobacillus reuteri JCM 1112] gi|194452776|gb|EDX41674.1| small GTP-binding protein [Lactobacillus reuteri 100-23] Length = 437 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 12/168 (7%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 +F GR NVGKSSL+N ++ +N SN G T+ + F +VD Sbjct: 178 SFIGRPNVGKSSLVNAILG-ENRVIVSNVAGTTRDA---INTQFETADGQ--KFTMVDTA 231 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G +N + + ++R + V ++++ G++++D+ + + + Sbjct: 232 GIRKKGKIYENTERYS--LMRSMRAIDDSDVVLVVLNAEEGIRELDKHIAGYAHEAGCGV 289 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSSVKRK 197 IV+ K D L T+ LIR Y + P + ++ K++ Sbjct: 290 IIVVNKWDTLKEKD-HRTMTDFTNLIRQEFQYLSYAPIIFVSAKTKQR 336 >gi|330752592|emb|CBL87538.1| GTP-binding protein [uncultured Flavobacteria bacterium] Length = 447 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 17/137 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKN-LARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +A GR NVGKS+ N +V +++ + + + R +H + N L+D Sbjct: 18 VAIVGRPNVGKSTFFNRMVQKRDAIVDSQSGVTRDRH--------YGKSDWNGRGFTLID 69 Query: 91 MPGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 GY +K +D L V + ++D GV +DQ++ L + Sbjct: 70 TGGYLENSEDVFQKEIDKQVSLAVEEAD------AIIFIVDVIDGVTGMDQNIAKLLRRS 123 Query: 149 AVSYQIVLTKIDKLSPT 165 + + + K+D S T Sbjct: 124 SKPIYLAINKVDNTSRT 140 >gi|323705459|ref|ZP_08117034.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium xylanolyticum LX-11] gi|323535361|gb|EGB25137.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium xylanolyticum LX-11] Length = 278 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 29/125 (23%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G NVGKS+LIN L KN A+T N PG T+ + P L+D PG Sbjct: 125 GIPNVGKSTLINSLTKTKN-AKTGNKPGVTKSKQWI----------KTPYFDLLDTPGIL 173 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTL----RCVYLLIDC-----------RHGVKQIDQD 140 + + ++V G ++ + + L YLL+D R+ ++ I +D Sbjct: 174 WPKFEDEHV---GMMLALTSAIKDELLNHEELAYLLLDILKINYPELLIKRYKLEDISKD 230 Query: 141 VFSFL 145 V+ L Sbjct: 231 VYKLL 235 >gi|309782317|ref|ZP_07677044.1| ribosome-associated GTPase EngA [Ralstonia sp. 5_7_47FAA] gi|308918935|gb|EFP64605.1| ribosome-associated GTPase EngA [Ralstonia sp. 5_7_47FAA] Length = 376 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 11/175 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + DF +N P L+D Sbjct: 112 IAIVGRPNVGKSTLVNALIGEERVI-AFDMPGTTRDAIYV---DFE--RNGKP-YTLIDT 164 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V L++D + + D + F+ + + Sbjct: 165 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLILDAQQDISDQDAHIAGFIVESGRA 222 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + K D L+ + ++ A+ I S+ +R GI L K++ Sbjct: 223 LVIGVNKWDGLTGHARDRIKHDMERKLQFLSFANVHYI--SAKERTGIGALMKSV 275 >gi|306821157|ref|ZP_07454773.1| GTP-binding protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550850|gb|EFM38825.1| GTP-binding protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 399 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/29 (58%), Positives = 22/29 (75%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRK 53 P+ IAF GR+NVGKSSLIN +VN++ Sbjct: 7 PQGERVHIAFFGRTNVGKSSLINKIVNQE 35 >gi|299756220|ref|XP_001829176.2| GTPase [Coprinopsis cinerea okayama7#130] gi|298411578|gb|EAU92811.2| GTPase [Coprinopsis cinerea okayama7#130] Length = 662 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G+ NVGKSSL+N L + + R S PG+T+H F D + LVD Sbjct: 380 IGLIGQPNVGKSSLLNALFGARKV-RASKTPGKTKHFQTMFWTSD----------VRLVD 428 Query: 91 MPG 93 PG Sbjct: 429 CPG 431 >gi|296111315|ref|YP_003621697.1| GTP-binding translation elongation factor LepA [Leuconostoc kimchii IMSNU 11154] gi|295832847|gb|ADG40728.1| GTP-binding translation elongation factor LepA [Leuconostoc kimchii IMSNU 11154] Length = 595 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 27/145 (18%) Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 NFF+ KD N A+ L+D PG+ ++ K++ + G+I LL Sbjct: 63 NFFIAKD-----NQRYALNLIDTPGHVDFSYEVSKSLAATEGVI--------------LL 103 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQI--VLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +D GV+ Q V +F KA + +I V+ KID L+ A + K + L + + Sbjct: 104 VDATQGVQA--QTVANFNLAKAQNIKILPVINKIDSLNADVA---MVKQQILELDVDFSD 158 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 +++ S+ G+E L + I++ I Sbjct: 159 SDILEVSAKHGTGVENLLEEIIQRI 183 >gi|195445824|ref|XP_002070502.1| GK10998 [Drosophila willistoni] gi|194166587|gb|EDW81488.1| GK10998 [Drosophila willistoni] Length = 684 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 31/194 (15%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P L KA PP + G + GK++L++ L R A G TQH+ F Sbjct: 140 PASAELLKARPPVVTVMGHVDHGKTTLLDSL--RGADVAAGEAGGITQHIGAFT----VT 193 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 L+N + +D PG+ A + +IV L++ GV Sbjct: 194 LENG-ERVTFLDTPGHAAFSAMRARGAVATDIIV-------------LVVAAEDGVMAQT 239 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE------VIPTS 192 ++V + V + L KIDK + +EK+K + E VIP S Sbjct: 240 REVIQLAKEVEVPIIVALNKIDK-----PEANIEKSKQQLAQMGLTLEEHGGDVQVIPIS 294 Query: 193 SVKRKGIEVLRKAI 206 ++K +++L +A+ Sbjct: 295 ALKGTNLQLLAEAV 308 >gi|29349244|ref|NP_812747.1| GTP-binding protein EngA [Bacteroides thetaiotaomicron VPI-5482] gi|253573091|ref|ZP_04850482.1| GTP-binding protein engA [Bacteroides sp. 1_1_6] gi|298384785|ref|ZP_06994344.1| ribosome-associated GTPase EngA [Bacteroides sp. 1_1_14] gi|37999664|sp|Q8A135|DER_BACTN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|29341152|gb|AAO78941.1| putative phosphoglycerate dehydrogenase [Bacteroides thetaiotaomicron VPI-5482] gi|251837314|gb|EES65414.1| GTP-binding protein engA [Bacteroides sp. 1_1_6] gi|298261929|gb|EFI04794.1| ribosome-associated GTPase EngA [Bacteroides sp. 1_1_14] Length = 437 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 21/183 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + +VR + L++D GV+ D ++ S Sbjct: 226 --YLVDTAGIRKKNKVNEDLEYYS--VVRSIRSIENADVCILMLDATRGVESQDLNILSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVKRKGIEVL 202 + K +V+ K D + TA+ E + + P + ++ K++ ++VL Sbjct: 282 IQKNQKGLVVVINKWDLIEDKTAKMMKEFEATIRSRFAPFVDFPIIFASALTKQRILKVL 341 Query: 203 RKA 205 +A Sbjct: 342 EEA 344 >gi|241616761|ref|XP_002408016.1| translation initiation factor if-2, putative [Ixodes scapularis] gi|215502907|gb|EEC12401.1| translation initiation factor if-2, putative [Ixodes scapularis] Length = 1060 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 27/145 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVP-----------KDFS 77 P I G + GK+ +++ + R + S A G TQ + VP K+F+ Sbjct: 472 PVICVLGHVDTGKTKILDTI--RHTHVQDSEAGGITQQIGATMVPLDAIKEQCKMVKEFT 529 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + N+P + ++D PG+ +S+ L R S L++D HG++ Sbjct: 530 SKPLNIPGLLIIDTPGH----------ESFSNLRSRG---SSLCDMAILVVDLMHGLEPQ 576 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL 162 + + L + + + L K+D+L Sbjct: 577 TIESLNMLRSRKTPFVVALNKVDRL 601 >gi|194388744|dbj|BAG60340.1| unnamed protein product [Homo sapiens] Length = 469 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK + S PG T++ +F+ P Sbjct: 219 KDGVVTIGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TP 267 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 268 SVKLCDCPG 276 >gi|30248601|ref|NP_840671.1| hypothetical protein NE0587 [Nitrosomonas europaea ATCC 19718] gi|30180196|emb|CAD84498.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 477 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 23/39 (58%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 EIA G +N GK+SLI L+ + R +A G T+H+ Sbjct: 20 EIAVVGHTNTGKTSLIRTLLRSTSFGRVDDAAGTTRHVE 58 >gi|194426656|ref|ZP_03059210.1| putative GTPase [Escherichia coli B171] gi|194415395|gb|EDX31663.1| putative GTPase [Escherichia coli B171] gi|195183288|dbj|BAG66827.1| putative small GTP-binding protein [Escherichia coli O111:H-] gi|195183354|dbj|BAG66891.1| putative small GTP-binding protein [Escherichia coli O111:H-] Length = 290 Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMIIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|227543422|ref|ZP_03973471.1| GTP-binding protein EngA [Lactobacillus reuteri CF48-3A] gi|300910088|ref|ZP_07127548.1| ribosome-associated GTPase EngA [Lactobacillus reuteri SD2112] gi|227186601|gb|EEI66672.1| GTP-binding protein EngA [Lactobacillus reuteri CF48-3A] gi|300892736|gb|EFK86096.1| ribosome-associated GTPase EngA [Lactobacillus reuteri SD2112] Length = 440 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 12/168 (7%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 +F GR NVGKSSL+N ++ +N SN G T+ + F +VD Sbjct: 181 SFIGRPNVGKSSLVNAILG-ENRVIVSNVAGTTRDA---INTQFETADGQ--KFTMVDTA 234 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G +N + + ++R + V ++++ G++++D+ + + + Sbjct: 235 GIRKKGKIYENTERYS--LMRSMRAIDDSDVVLVVLNAEEGIRELDKHIAGYAHEAGCGV 292 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSSVKRK 197 IV+ K D L T+ LIR Y + P + ++ K++ Sbjct: 293 IIVVNKWDTLKEKD-HRTMTDFTNLIRQEFQYLSYAPIIFVSAKTKQR 339 >gi|255545333|ref|XP_002513727.1| GTP binding protein, putative [Ricinus communis] gi|223547178|gb|EEF48674.1| GTP binding protein, putative [Ricinus communis] Length = 596 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS IN L +K TS PG+T+H + + + L D Sbjct: 321 VGFVGYPNVGKSSTINALAGQKRTGVTS-TPGKTKHFQTLIISE---------ELTLCDC 370 Query: 92 PG 93 PG Sbjct: 371 PG 372 >gi|183599776|ref|ZP_02961269.1| hypothetical protein PROSTU_03284 [Providencia stuartii ATCC 25827] gi|188022040|gb|EDU60080.1| hypothetical protein PROSTU_03284 [Providencia stuartii ATCC 25827] Length = 302 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 38/197 (19%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKN 81 LP G +A GR NVGKS+L+N L+ +K ++ TS P T+H + ++ Sbjct: 5 LPHCGF--VAIVGRPNVGKSTLLNQLLGQK-VSITSRKPQTTRHRIMGIHTEDEYQ---- 57 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD PG N L+ R S S++ V L+I G D D Sbjct: 58 ----IIYVDTPGLHIEEKRAIN-----RLMNRAAS--SSIGDVELVIFVVEGTNWTDDDE 106 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETL--------EKTKYLIRNYPTAHPEVIPTSS 193 K + ++L I+K+ T + L +K +L +V+P S+ Sbjct: 107 MVLNKLKGLRCPVILA-INKIDNVTDKTVLLPHIGFVSQKMNFL---------DVVPISA 156 Query: 194 VKRKGIEVLRKAILETI 210 K KG++ + K + + I Sbjct: 157 EKGKGVDTIAKIVKQHI 173 >gi|163760594|ref|ZP_02167675.1| GTP-binding protein Era [Hoeflea phototrophica DFL-43] gi|162282209|gb|EDQ32499.1| GTP-binding protein Era [Hoeflea phototrophica DFL-43] Length = 312 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 33/154 (21%) Query: 25 PKAGPPE---IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P GP +A G N GKS+L+N LV A+ S + Q V + + Sbjct: 13 PPEGPTRSGFVALIGAPNAGKSTLVNQLVG----AKVSIVSHKVQTTRAIVRGIAIHERA 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + +D PG APK+ +D +WGG V +LID G+K Sbjct: 69 QI---VFIDTPGI---FAPKRRLDRAMVTTAWGGA--------KDGDMVLVLIDAERGIK 114 Query: 136 QIDQDVFSFLDKKAVSYQ---IVLTKIDKLSPTT 166 D + LD A +Q +VL K+D++ T Sbjct: 115 ---GDAEALLDSLADVHQRKILVLNKVDRVKRDT 145 >gi|315038199|ref|YP_004031767.1| GTP-binding protein EngA [Lactobacillus amylovorus GRL 1112] gi|325956651|ref|YP_004292063.1| GTP-binding protein Der [Lactobacillus acidophilus 30SC] gi|312276332|gb|ADQ58972.1| GTP-binding protein EngA [Lactobacillus amylovorus GRL 1112] gi|325333216|gb|ADZ07124.1| GTP-binding protein Der [Lactobacillus acidophilus 30SC] gi|327183476|gb|AEA31923.1| GTP-binding protein Der [Lactobacillus amylovorus GRL 1118] Length = 435 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A GR NVGKS+L N ++N++ LA + PG T+ N+ Sbjct: 4 PVVAIVGRPNVGKSTLFNRIINQR-LAIVEDKPGVTRDRNY 43 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 13/142 (9%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I+FS GR NVGKSS++N L+ + +N G T+ P +K + A + Sbjct: 175 ISFSVIGRPNVGKSSIVNKLLGEDRVI-VANEEGTTRDA-VDTPFTKDGVKFKVVDTAGI 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G Y + K +V +R +S V L++D G+++ D+ V + + Sbjct: 233 RRRGKVYEKTEKYSV-------LRAMSAIERSDVVLLVLDASTGIREQDKHVAGYAHEAG 285 Query: 150 VSYQIVLTKID--KLSPTTAQE 169 IV+ K D K + T+A+E Sbjct: 286 RGIIIVVNKWDLPKKNSTSAKE 307 >gi|227832334|ref|YP_002834041.1| putative ferrous iron transport protein B [Corynebacterium aurimucosum ATCC 700975] gi|262183806|ref|ZP_06043227.1| putative ferrous iron transport protein B [Corynebacterium aurimucosum ATCC 700975] gi|227453350|gb|ACP32103.1| putative ferrous iron transport protein B [Corynebacterium aurimucosum ATCC 700975] Length = 644 Score = 36.6 bits (83), Expect = 2.3, Method: Composition-based stats. Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 G + AG P IA G N GKS+L N L K A+T N PG T Sbjct: 14 GAVAPAGAPIIALVGSPNSGKSTLFNALTGAK--AQTGNWPGTT 55 >gi|227364908|ref|ZP_03848953.1| GTP-binding protein EngA [Lactobacillus reuteri MM2-3] gi|325682467|ref|ZP_08161984.1| ribosome-associated GTPase EngA [Lactobacillus reuteri MM4-1A] gi|227070055|gb|EEI08433.1| GTP-binding protein EngA [Lactobacillus reuteri MM2-3] gi|324978306|gb|EGC15256.1| ribosome-associated GTPase EngA [Lactobacillus reuteri MM4-1A] Length = 440 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 12/168 (7%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 +F GR NVGKSSL+N ++ +N SN G T+ + F +VD Sbjct: 181 SFIGRPNVGKSSLVNAILG-ENRVIVSNVAGTTRDA---INTQFETADGQ--KFTMVDTA 234 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G +N + + ++R + V ++++ G++++D+ + + + Sbjct: 235 GIRKKGKIYENTERYS--LMRSMRAIDDSDVVLVVLNAEEGIRELDKHIAGYAHEAGCGV 292 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSSVKRK 197 IV+ K D L T+ LIR Y + P + ++ K++ Sbjct: 293 IIVVNKWDTLKEKD-HRTMTDFTNLIRQEFQYLSYAPIIFVSAKTKQR 339 >gi|224531730|ref|ZP_03672362.1| ribosome-associated GTPase EngA [Borrelia valaisiana VS116] gi|224511195|gb|EEF81601.1| ribosome-associated GTPase EngA [Borrelia valaisiana VS116] Length = 433 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 9/130 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G+ N GKS+LIN L + ++ S+ PG T+ F+ F++ N ++D Sbjct: 175 KVGIIGKPNSGKSTLINYLSGNE-ISIVSDQPGTTRD---FIKTKFTS---NGKVFEIID 227 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + + R L + V+LLID + + D+ + ++ KK Sbjct: 228 TAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVKEELTSQDKKIAHYVAKKGK 285 Query: 151 SYQIVLTKID 160 IV +K D Sbjct: 286 GIIIVFSKWD 295 >gi|156553092|ref|XP_001599322.1| PREDICTED: similar to septin [Nasonia vitripennis] Length = 359 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 63/150 (42%), Gaps = 27/150 (18%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL----VDM 91 G S +GKS+L+N L +L P T+ N V D S ++ + L VD Sbjct: 44 GESGLGKSTLVNSLF-LTDLYPERVIPNATEKTNQVVKLDASTVEIEERGVKLRLTVVDT 102 Query: 92 PGYGYARAPKKNVDSWGGLIV-------RYLSERSTLR-----------CVYLLIDCRHG 133 PGYG A N DS+ +I R+L + S L C Y + HG Sbjct: 103 PGYGDA---IDNTDSFRAIIQYIDDQFERFLRDESGLNRRNIVDNRIHCCFYFISPFGHG 159 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K +D + L K V+ V+ K D L+ Sbjct: 160 LKPLDIEFMKQLHNK-VNIVPVIAKADVLT 188 >gi|154498134|ref|ZP_02036512.1| hypothetical protein BACCAP_02115 [Bacteroides capillosus ATCC 29799] gi|150273124|gb|EDN00281.1| hypothetical protein BACCAP_02115 [Bacteroides capillosus ATCC 29799] Length = 441 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 19/197 (9%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE + + ++A G+ NVGKSSLIN ++ + + SN G T+ S Sbjct: 166 PEDQVEEQDDVIKVAVIGKPNVGKSSLINRILGEERVI-VSNMAGTTRDAI------DSY 218 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 +N+ L+D G ++ + L ER + C+ +++D + GV + D Sbjct: 219 YENDKGKYILIDTAGMRKKSKVDDRIEKFSVLRATMAIERCDV-CL-IMVDAQEGVTEQD 276 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR---NYPTAHPEVIPTSSVK 195 V + + IV+ K D + +T++K + +R +Y T P + ++ Sbjct: 277 TKVAGLAHEAGKACIIVVNKWDAIEKD--DKTMDKMRQDVRRDLSYMTYAPILFISA--- 331 Query: 196 RKGIEVLRKAILETINY 212 + G V R + E INY Sbjct: 332 KTGQRVER--LFELINY 346 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 21/141 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS L N LV ++ L+ + PG T+ + ++ N K +V Sbjct: 3 PLVAIVGRPNVGKSMLFNRLVGQR-LSIVEDTPGVTRD-RIYAECEWRNRK-----FDIV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G + N DS I+ ++ E++ + + D + G+ DQ+V + Sbjct: 56 DTGGI------EPNTDSE---ILSFMREQAEIAIRNADVTVFVCDIKSGLTASDQEVANM 106 Query: 145 LDKKAVSYQIVLTKIDKLSPT 165 L + + + K+D++ T Sbjct: 107 LLRSGKPVVLAVNKMDQVGMT 127 >gi|330685672|gb|EGG97313.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus epidermidis VCU121] Length = 291 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 GL P+A I G NVGKS+LIN L NR ++A+T N PG T+ + Sbjct: 115 GLRPRAIRAMIV--GIPNVGKSTLINKLANR-SIAQTGNKPGVTKQQQWI 161 >gi|327474514|gb|EGF19919.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK408] Length = 436 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|238019393|ref|ZP_04599819.1| hypothetical protein VEIDISOL_01257 [Veillonella dispar ATCC 17748] gi|237864092|gb|EEP65382.1| hypothetical protein VEIDISOL_01257 [Veillonella dispar ATCC 17748] Length = 444 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN++ ++ + PG T+ +F D L ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVNKR-ISIVEDIPGVTRDRIYF---DAEWLNREF---TMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L E + + ++D + G+ D++V + L Sbjct: 57 DTGGIEFITDNSHVIPKMMRLQAELAIEEAD--VILFVVDGKQGIVPADEEVANILRASG 114 Query: 150 VSYQIVLTKIDKLS 163 +V+ KID ++ Sbjct: 115 KPVVLVVNKIDSVN 128 >gi|255559442|ref|XP_002520741.1| Nucleolar GTP-binding protein, putative [Ricinus communis] gi|223540126|gb|EEF41703.1| Nucleolar GTP-binding protein, putative [Ricinus communis] Length = 366 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 12/72 (16%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 GLLP+ P G NVGKSSLIN L+ R+ + ++ PG T+ L + F N Sbjct: 181 GLLPR--PVRAGVVGYPNVGKSSLINRLLKRR-MCEAASRPGVTRELKWV---RFGN--- 231 Query: 82 NLPAMALVDMPG 93 + L+D PG Sbjct: 232 ---ELELLDSPG 240 >gi|167040606|ref|YP_001663591.1| GTP-binding protein EngA [Thermoanaerobacter sp. X514] gi|300914647|ref|ZP_07131963.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X561] gi|307724119|ref|YP_003903870.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X513] gi|238687595|sp|B0K3E4|DER_THEPX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166854846|gb|ABY93255.1| small GTP-binding protein [Thermoanaerobacter sp. X514] gi|300889582|gb|EFK84728.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X561] gi|307581180|gb|ADN54579.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X513] Length = 439 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA G+ NVGKSSL+N ++ + + SN PG T+ + FS N L+D Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVI-VSNIPGTTRDA---IDTPFSKDGKN---YVLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++++ + L ERS + C+ L+ID G + D + + + Sbjct: 231 TAGIRRKSRISESIERYSVLRALAAIERSDI-CL-LMIDATEGPTEQDTKIAGYAFENGK 288 Query: 151 SYQIVLTKIDKL 162 IV+ K D + Sbjct: 289 GIIIVVNKWDAI 300 >gi|212640677|ref|YP_002317197.1| tRNA modification GTPase TrmE [Anoxybacillus flavithermus WK1] gi|212562157|gb|ACJ35212.1| tRNA modification GTPase, TrmE [Anoxybacillus flavithermus WK1] Length = 464 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L + +N A ++ PG T+ V +++ N++ +P + L+D G Sbjct: 233 GRPNVGKSSLLNSLAH-ENRAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLLDTAGI- 284 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L + L+++ + D+ +F + K + ++ Sbjct: 285 --RETEDIVERIGVERSRKVLKEADL--ILLVLNYNEPLTVEDEQLFEAV--KGMDVIVI 338 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D Q +++ K L + P +I TS ++ +GI+ L +AI Sbjct: 339 VNKTD----LPKQIDMDRVKQLAQGLP-----IITTSLLEDRGIDQLEEAI 380 >gi|260828382|ref|XP_002609142.1| hypothetical protein BRAFLDRAFT_131372 [Branchiostoma floridae] gi|229294497|gb|EEN65152.1| hypothetical protein BRAFLDRAFT_131372 [Branchiostoma floridae] Length = 612 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 33/164 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVP-----------KDFS 77 P + G + GK+ +++ + R + A G TQ + VP + FS Sbjct: 23 PVVVVLGHVDTGKTKILDKI--RHTHVQDGEAGGITQQIGATMVPVEAIREQAKMVRKFS 80 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + LP + ++D PG+ +S+ L R S L++D HG++ Sbjct: 81 DFNIKLPGLLIIDTPGH----------ESFSNLRSRG---SSLCDIAILVVDIMHGLEPQ 127 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL-----SPTT-AQETLEKTK 175 + + L + + I L KID+L SP T ++T++K K Sbjct: 128 TIESLNLLKARKTPFVIALNKIDRLYEWKPSPNTDVRDTIKKQK 171 >gi|118474391|ref|YP_892485.1| GTP-binding protein EngA [Campylobacter fetus subsp. fetus 82-40] gi|166224321|sp|A0RQK2|DER_CAMFF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|118413617|gb|ABK82037.1| GTP-binding protein EngA [Campylobacter fetus subsp. fetus 82-40] Length = 463 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 13/130 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I GR NVGKSSL N L ++ +A TS+ G T+ N + F + KN + L+D Sbjct: 3 KIILVGRPNVGKSSLFNRLA-KQRIAITSDVSGTTRDTN--KAEIFIDDKNCI----LID 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + KNV + L+E + ++D ++ +ID+ F L Sbjct: 56 SGGLDDSNELFKNVK------INTLNEAKNADIIVFMVDGKNFPDEIDKRFFYELSNLNK 109 Query: 151 SYQIVLTKID 160 +V+ K+D Sbjct: 110 PIALVVNKVD 119 >gi|238924233|ref|YP_002937749.1| GTP-binding protein Era [Eubacterium rectale ATCC 33656] gi|238875908|gb|ACR75615.1| GTP-binding protein Era [Eubacterium rectale ATCC 33656] Length = 303 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 28/187 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ V D + +D Sbjct: 10 VTIIGRPNVGKSTLMNRLIGQK-IAITSNKPQTTRNRIQTVYTDMEK-----GQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + G +V ++E++ + V L++ + + +Q + L K Sbjct: 64 PGIHKAK------NKLGEYMVN-VAEKTLNEVDVVLWLVEPTNFIGAGEQHIIEQLKKVN 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYL--IRNYPTA--HPEVIPTSSVKRKGIEVLRKA 205 +++ K+D T+EK K L I Y E+IPTS+++ + + + + Sbjct: 117 TPVILIINKVD---------TVEKEKVLEYIDTYRKVFDFAEIIPTSALRGQNTDDVINS 167 Query: 206 ILETINY 212 I + + Y Sbjct: 168 IFKYLPY 174 >gi|221046170|dbj|BAH14762.1| unnamed protein product [Homo sapiens] Length = 469 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK + S PG T++ +F+ P Sbjct: 219 KDGVVTIGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TP 267 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 268 SVKLCDCPG 276 >gi|139439609|ref|ZP_01773022.1| Hypothetical protein COLAER_02049 [Collinsella aerofaciens ATCC 25986] gi|133774950|gb|EBA38770.1| Hypothetical protein COLAER_02049 [Collinsella aerofaciens ATCC 25986] Length = 356 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 25/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 +A GR N GKS+L+N +K + A + + V N P + V Sbjct: 68 VALVGRPNAGKSTLLNACYGKKVAITSPVAQTTRRRMRAVV---------NRPGYQLVFV 118 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG PK + S L L E + + V LID + + D V + Sbjct: 119 DTPGI---HKPKDGLGSE--LNKSALFELNDVDVVAFLIDATKPIGRGDAWVAERVKNAR 173 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +VLTK D+ P E L+ L+ + + I TSSVK ++ A +ET Sbjct: 174 SKKVLVLTKADEADPAQVMEQLKAAHELME-----YDDEIVTSSVKNFNVD----AFIET 224 Query: 210 INY 212 + + Sbjct: 225 VAH 227 >gi|67967800|dbj|BAE00382.1| unnamed protein product [Macaca fascicularis] Length = 607 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 363 IGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|331673511|ref|ZP_08374278.1| conserved hypothetical protein [Escherichia coli TA280] gi|331069322|gb|EGI40710.1| conserved hypothetical protein [Escherichia coli TA280] Length = 297 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 44 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 96 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 97 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 150 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT + R + HP V+ S+ Sbjct: 151 HQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHP-VVAVSART 209 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 210 GWELDTLVSALMTAL 224 >gi|327490071|gb|EGF21859.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1058] Length = 436 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|323464644|gb|ADX76797.1| GTP-binding protein, putative [Staphylococcus pseudintermedius ED99] Length = 290 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 14/73 (19%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLK 80 GL P+A I G NVGKS+LIN L NR ++A+T N PG T+ + V K Sbjct: 115 GLKPRAIRAMIV--GIPNVGKSTLINKLANR-SIAQTGNKPGVTKQQQWIKVGK------ 165 Query: 81 NNLPAMALVDMPG 93 ++ L+D PG Sbjct: 166 ----SLQLLDTPG 174 >gi|291001829|ref|XP_002683481.1| large subunit GTPase 1 [Naegleria gruberi] gi|284097110|gb|EFC50737.1| large subunit GTPase 1 [Naegleria gruberi] Length = 723 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 + G NVGKSSL+N+L +K +A + PG+T+H Sbjct: 404 VGMVGYPNVGKSSLVNVLCGKKKVA-VGSTPGKTKHF 439 >gi|125858854|gb|AAI29971.1| Gnal1 protein [Mus musculus] gi|125858977|gb|AAI29970.1| Gnal1 protein [Mus musculus] Length = 524 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK + S PG T++ +F+ P Sbjct: 274 KDGVVTIGCIGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TP 322 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 323 SVKLCDCPG 331 >gi|78186288|ref|YP_374331.1| GTP-binding protein EngA [Chlorobium luteolum DSM 273] gi|123583448|sp|Q3B5U3|DER_PELLD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78166190|gb|ABB23288.1| Small GTP-binding protein domain [Chlorobium luteolum DSM 273] Length = 436 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 22/152 (14%) Query: 28 GPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 GPPE +A GR NVGKSS +N L+ N S+ PG T+ + F+ + Sbjct: 169 GPPEEDGAIRLAVIGRPNVGKSSFVNALLG-SNRQIVSSIPGTTRDA---IDTRFTRKQQ 224 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQ 139 L+D G ++ + L SER+ RC +++D G+++ D Sbjct: 225 EF---MLIDTAGLRKRTKISAGIEYYSSL----RSERAIERCEVAIVMLDATPGIEKQDL 277 Query: 140 DVFSFLDKKAVSYQIVLTK---IDKLSPTTAQ 168 + + ++ +++ K ++K S T+ Q Sbjct: 278 KIINIAAERKRGVLLLVNKWDLVEKDSKTSKQ 309 >gi|315637145|ref|ZP_07892368.1| ribosome-associated GTPase EngA [Arcobacter butzleri JV22] gi|315478681|gb|EFU69391.1| ribosome-associated GTPase EngA [Arcobacter butzleri JV22] Length = 485 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 13/180 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSS++N +V + R+ +P ++ P D S + + VD Sbjct: 220 VAIIGRVNVGKSSILNAIVGAE---RSVVSPIAGTTID---PVDES-FEYKEKQITFVDT 272 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + ++ + + + + E++ + V L D + +D+ + +D+ + Sbjct: 273 AGL-RRRGSIEGIEKYALMRTKEMLEKANMALVVL--DASRELTDLDEKIAGLVDEYGLG 329 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 IVL K D+ + T Q+ E+ + R + + P +I S+ + IE L+ I+E + Sbjct: 330 TIIVLNKWDE-NMDTFQKIEEEIRRRFR-FLSYAP-IIAVSAKTGRSIERLKDKIIEIFD 386 >gi|307267081|ref|ZP_07548594.1| ribosome-associated GTPase EngA [Thermoanaerobacter wiegelii Rt8.B1] gi|306917912|gb|EFN48173.1| ribosome-associated GTPase EngA [Thermoanaerobacter wiegelii Rt8.B1] Length = 439 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA G+ NVGKSSL+N ++ + + SN PG T+ + FS N L+D Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVI-VSNIPGTTRDA---IDTPFSKDGKN---YVLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++++ + L ERS + C+ L+ID G + D + + + Sbjct: 231 TAGIRRKSRISESIERYSVLRALAAIERSDI-CL-LMIDATEGPTEQDTKIAGYAFENGK 288 Query: 151 SYQIVLTKIDKL 162 IV+ K D + Sbjct: 289 GIIIVVNKWDAI 300 >gi|302754754|ref|XP_002960801.1| hypothetical protein SELMODRAFT_75698 [Selaginella moellendorffii] gi|300171740|gb|EFJ38340.1| hypothetical protein SELMODRAFT_75698 [Selaginella moellendorffii] Length = 330 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 30/181 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G+ NVGKS+L+N ++ +K L+ + P T+H L ++ M L Sbjct: 32 VALIGKPNVGKSTLLNGIIGQK-LSIVTAKPQTTRHRILGICSGPNYQ--------MILY 82 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG + K +D VR + S C+ L+ D H +Q V LD+ A Sbjct: 83 DTPGVITKQMHK--LDELMMKSVRSATINSD--CLLLIADICHPPEQ----VLGTLDEGA 134 Query: 150 VSY------QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 V+ +VL K DK+ + Q +K ++ +N + EVIP S+ GIE ++ Sbjct: 135 VNLIKSKPTLLVLNKKDKVKQSEIQ---KKQEWYEKN--SGMDEVIPVSAKFGLGIEEVK 189 Query: 204 K 204 + Sbjct: 190 Q 190 >gi|302804232|ref|XP_002983868.1| hypothetical protein SELMODRAFT_119375 [Selaginella moellendorffii] gi|300148220|gb|EFJ14880.1| hypothetical protein SELMODRAFT_119375 [Selaginella moellendorffii] Length = 330 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 30/181 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G+ NVGKS+L+N ++ +K L+ + P T+H L ++ M L Sbjct: 32 VALIGKPNVGKSTLLNGIIGQK-LSIVTAKPQTTRHRILGICSGPNYQ--------MILY 82 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG + K +D VR + S C+ L+ D H +Q V LD+ A Sbjct: 83 DTPGVITKQMHK--LDELMMKSVRSATINSD--CLLLIADICHPPEQ----VLGTLDEGA 134 Query: 150 VSY------QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 V+ +VL K DK+ + Q +K ++ +N + EVIP S+ GIE ++ Sbjct: 135 VNLIKSKPTLLVLNKKDKVKQSEIQ---KKQEWYEKN--SGMDEVIPVSAKFGLGIEEVK 189 Query: 204 K 204 + Sbjct: 190 Q 190 >gi|239636277|ref|ZP_04677279.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus warneri L37603] gi|239597632|gb|EEQ80127.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus warneri L37603] Length = 291 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 14/73 (19%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLK 80 GL P+A I G NVGKS+LIN L NR ++A+T N PG T+ + V K Sbjct: 115 GLRPRAIRAMIV--GIPNVGKSTLINKLANR-SVAQTGNKPGVTKQQQWIKVGK------ 165 Query: 81 NNLPAMALVDMPG 93 ++ L+D PG Sbjct: 166 ----SLQLLDTPG 174 >gi|210612261|ref|ZP_03289209.1| hypothetical protein CLONEX_01409 [Clostridium nexile DSM 1787] gi|210151635|gb|EEA82642.1| hypothetical protein CLONEX_01409 [Clostridium nexile DSM 1787] Length = 442 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 15/147 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS++N L+ +N S+ G T+ + +K + + Sbjct: 178 PRIAIVGKPNVGKSSIVNKLLG-ENRVIVSDVAGTTRDAI------DTAIKYHGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID G+ + D + ++ Sbjct: 231 DTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLMVIDAVEGITEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKY 176 IV+ K D A E +KT Y Sbjct: 289 KGIIIVVNKWD------AIEKHDKTMY 309 >gi|149183701|ref|ZP_01862112.1| GTP-binding protein EngA [Bacillus sp. SG-1] gi|148848583|gb|EDL62822.1| GTP-binding protein EngA [Bacillus sp. SG-1] Length = 436 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSL+N L+ + SN G T+ S LK + ++ Sbjct: 176 IKFSLIGRPNVGKSSLVNALLGEDRVI-VSNVAGTTRDAI------DSKLKVDGQEYVII 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + + L ERS + V ++ID G+ + D+ + + + Sbjct: 229 DTAGMRKKGKVYESTEKYSVLRALRAIERSDV--VLVVIDGEEGIIEQDKKIAGYAHEAG 286 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 IV+ K D + ++T++K + IR + Sbjct: 287 RGVIIVVNKWDAVEKD--EKTMKKFEENIREH 316 >gi|114306767|dbj|BAF31262.1| HSR1 protein [Homo sapiens] Length = 545 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK ++ S PG T++ +F+ P Sbjct: 342 KDGVVTIGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TP 390 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 391 SVKLCDCPG 399 >gi|326391582|ref|ZP_08213112.1| ribosome-associated GTPase EngA [Thermoanaerobacter ethanolicus JW 200] gi|325992364|gb|EGD50826.1| ribosome-associated GTPase EngA [Thermoanaerobacter ethanolicus JW 200] Length = 439 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA G+ NVGKSSL+N ++ + + SN PG T+ + FS N L+D Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVI-VSNIPGTTRDA---IDTPFSKDGKN---YVLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++++ + L ERS + C+ L+ID G + D + + + Sbjct: 231 TAGIRRKSRISESIERYSVLRALAAIERSDI-CL-LMIDATEGPTEQDTKIAGYAFENGK 288 Query: 151 SYQIVLTKIDKL 162 IV+ K D + Sbjct: 289 GIIIVVNKWDAI 300 >gi|324993642|gb|EGC25561.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK405] gi|324995046|gb|EGC26959.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK678] gi|327462911|gb|EGF09232.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1] Length = 436 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|193063029|ref|ZP_03044121.1| putative GTPase [Escherichia coli E22] gi|260845663|ref|YP_003223441.1| hypothetical protein ECO103_3582 [Escherichia coli O103:H2 str. 12009] gi|260846939|ref|YP_003224717.1| hypothetical protein ECO103_4896 [Escherichia coli O103:H2 str. 12009] gi|192931288|gb|EDV83890.1| putative GTPase [Escherichia coli E22] gi|257760810|dbj|BAI32307.1| hypothetical protein ECO103_3582 [Escherichia coli O103:H2 str. 12009] gi|257762086|dbj|BAI33583.1| hypothetical protein ECO103_4896 [Escherichia coli O103:H2 str. 12009] gi|320667285|gb|EFX34248.1| hypothetical protein ECOSU61_09164 [Escherichia coli O157:H7 str. LSU-61] Length = 290 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 72/186 (38%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ Y L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA------LYRDILPKLDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|317495247|ref|ZP_07953617.1| GTP-binding protein Era [Gemella moribillum M424] gi|316914669|gb|EFV36145.1| GTP-binding protein Era [Gemella moribillum M424] Length = 302 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR N GKS+L+N ++ +K +A S+ P T+++ V D + + +D Sbjct: 11 VTIIGRPNAGKSTLLNNILKQK-IAIMSDKPQTTRNIINGVYTDQDS------QIVFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + + + S + VYL+I+ DQ + + + + V Sbjct: 64 PG---IHKPKHRLGDYMMKLASSAIQESEI--VYLIINAGEKFGPGDQHLINIVKELNVP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVL 202 +++ KID +SP EK +I Y + E++P S++K ++ L Sbjct: 119 TFLLINKIDLISP-------EKLIEIISFYKDLYDFVEIVPISALKSINVDNL 164 >gi|311693676|gb|ADP96549.1| GTP-binding protein Era-like protein [marine bacterium HP15] Length = 305 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K L+ TS P T+H +K P A+ VD Sbjct: 17 VAIVGRPNVGKSTLLNHILGQK-LSITSRKPQTTRH-------QVLGIKTVGPVQAIYVD 68 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK----QIDQDVFSFLD 146 PG + P+ I RY+++ +T + + + + D+ V L Sbjct: 69 TPGM-HEEEPRA--------INRYMNKAATSALIDVDVVVFVVDQLAWTTADEMVLEKLS 119 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K+DK+ + L L + A E+IP S++K +E L +A+ Sbjct: 120 RLKCPVILAVNKVDKIE--KRESLLPHLDMLSKKREFA--EIIPLSALKETNLEPLEEAV 175 >gi|303390531|ref|XP_003073496.1| translation initiation factor IF-2P [Encephalitozoon intestinalis ATCC 50506] gi|303302643|gb|ADM12136.1| translation initiation factor IF-2P [Encephalitozoon intestinalis ATCC 50506] Length = 630 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 21/139 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FF----VPKDFSNLKNNL 83 P G + GK+ L++ L R++ + A G TQ + FF + K ++ L Sbjct: 33 PICCILGHVDTGKTKLLDKL--RESNVQGEEAGGITQQIGATFFPVSELFKKCGRKESKL 90 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + ++D PG+ +S+ L R S L++D HG++ + Sbjct: 91 PGILVIDTPGH----------ESFANLRTRG---SSLCNLAILVVDIVHGLEAQTLESIE 137 Query: 144 FLDKKAVSYQIVLTKIDKL 162 L K+ + + L K+D+L Sbjct: 138 LLKKRKTPFVVALNKVDRL 156 >gi|168218051|ref|ZP_02643676.1| tRNA modification GTPase TrmE [Clostridium perfringens NCTC 8239] gi|182379938|gb|EDT77417.1| tRNA modification GTPase TrmE [Clostridium perfringens NCTC 8239] Length = 458 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 16/126 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+N K A ++ G T+ V +++ NL + +P + LVD G Sbjct: 231 GKPNVGKSSLLNALLNEKR-AIVTDIAGTTRD----VIEEYINL-DGIP-VRLVDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R + V+ G + + + + V L++D + + D+++ ++ D+K Y + Sbjct: 283 --RETEDVVEKIG--VEKSKEKINEADLVILMLDTSRELDEEDKEIIDYIKDRK---YIV 335 Query: 155 VLTKID 160 +L K+D Sbjct: 336 LLNKVD 341 >gi|160944206|ref|ZP_02091435.1| hypothetical protein FAEPRAM212_01715 [Faecalibacterium prausnitzii M21/2] gi|158444388|gb|EDP21392.1| hypothetical protein FAEPRAM212_01715 [Faecalibacterium prausnitzii M21/2] Length = 718 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNL 55 EIG++ K P +A GRS+ GKS+LIN L+ + + Sbjct: 110 EIGIMSKFVKPTVAIVGRSDTGKSTLINSLIGAEKM 145 >gi|149192068|ref|ZP_01870293.1| GTP-binding protein Era [Vibrio shilonii AK1] gi|148834093|gb|EDL51105.1| GTP-binding protein Era [Vibrio shilonii AK1] Length = 329 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 28/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H V D + A+ VD Sbjct: 35 VAIVGRPNVGKSTLLNHILGQK-ISITSRKPQTTRHRIMGVDTD-----GDYQAI-YVDT 87 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V L+D H D+ V + L K Sbjct: 88 PGLHIEEKRAIN-----RLMNRAANSSLSDVNLVLFLVDGTHWTDD-DEMVLNKLRKSDF 141 Query: 151 SYQIVLTKIDKLSPTT-----AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D + E +K ++ +V+P S+ K +VLRK Sbjct: 142 PVILCMNKVDNVKDRNDVMLHMHELSKKMDFV---------DVVPISAKHGKNTDVLRKH 192 Query: 206 ILETI 210 + E + Sbjct: 193 VREHL 197 >gi|220933188|ref|YP_002510096.1| tRNA modification GTPase TrmE [Halothermothrix orenii H 168] gi|219994498|gb|ACL71101.1| tRNA modification GTPase TrmE [Halothermothrix orenii H 168] Length = 463 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 87/175 (49%), Gaps = 29/175 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N LV ++N A ++ PG T+ + +++ N++ +P + ++D G Sbjct: 232 GKPNVGKSSLLNSLV-QENRAIVTDIPGTTRD----IIEEYINIR-GIP-LRIIDTAGI- 283 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 R + V+ G R++LR V ++D G+ + D ++ + K + Sbjct: 284 --RETRDMVEKIG-----VEKTRNSLREADLVLFMLDVAQGLTEEDIKIYDMVKDKPMIV 336 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + T +D+ E EK I+++ HP ++ S + G++ L++AI+ Sbjct: 337 LVNKTDLDR-------EIDEKK---IKDHFKEHP-LLWISVKEEIGLDNLKEAII 380 >gi|117923695|ref|YP_864312.1| GTPase EngC [Magnetococcus sp. MC-1] gi|117607451|gb|ABK42906.1| GTPase EngC [Magnetococcus sp. MC-1] Length = 351 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 5/47 (10%) Query: 23 LLPKAGPPE-IAFSGRSNVGKSSLINILVNRKNL----ARTSNAPGR 64 L P GP E +AF G S VGKS+LIN L+++K++ AR + GR Sbjct: 185 LGPWIGPGESVAFLGSSGVGKSTLINALLDQKSMATQAARADDDRGR 231 >gi|332367384|gb|EGJ45117.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1059] Length = 436 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|296197594|ref|XP_002746349.1| PREDICTED: guanine nucleotide-binding protein-like 1-like isoform 2 [Callithrix jacchus] Length = 590 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 346 IGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 394 Query: 91 MPG 93 PG Sbjct: 395 CPG 397 >gi|295103075|emb|CBL00619.1| Dynamin family. [Faecalibacterium prausnitzii SL3/3] Length = 718 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 24/36 (66%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNL 55 EIG++ K P +A GRS+ GKS+LIN L+ + + Sbjct: 110 EIGIMSKFVKPTVAIVGRSDTGKSTLINSLIGAEKM 145 >gi|289436062|ref|YP_003465934.1| tRNA modification GTPase TrmE [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172306|emb|CBH28852.1| tRNA modification GTPase TrmE [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 457 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ + A ++ G T+ + +++ N++ +P + L+D Sbjct: 223 AIIGRPNVGKSSLLNQLIQEEK-AIVTDIAGTTRD----IIEEYVNVR-GVP-LRLIDTA 275 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S ++ ++L+ + +D F +Y Sbjct: 276 GI---RETEDIVEKIG--VER--SRKALKDADFILLVLNQNEELTIEDEALFEAASGHNY 328 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +VL K D ++ L+ + +R A+P V+ TS +K +G+E L AI Sbjct: 329 VVVLNKTD------LEQRLDIER--VRELAGANP-VVETSLIKDEGLEALEDAI 373 >gi|225377164|ref|ZP_03754385.1| hypothetical protein ROSEINA2194_02810 [Roseburia inulinivorans DSM 16841] gi|225211069|gb|EEG93423.1| hypothetical protein ROSEINA2194_02810 [Roseburia inulinivorans DSM 16841] Length = 302 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 82/181 (45%), Gaps = 16/181 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ V D + +D Sbjct: 10 VTIIGRPNVGKSTLMNHLIGQK-IAITSNKPQTTRNRIQTVYTDMER-----GQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 P G RA K + + L+E + + L++ + + +Q + L K Sbjct: 64 P--GIHRAKNKLGEYMVNVAEHTLNE---VDVILWLVEPSNFIGAGEQHIIEQLKKVKTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +++ K+D + E ++ + + Y A E+IP S+++ K ++ + I + + Sbjct: 119 VILIINKVDTVDREKIVEYIDTYRKV---YDFA--EIIPASALRAKNLDTVIDMIFKYLP 173 Query: 212 Y 212 Y Sbjct: 174 Y 174 >gi|167768008|ref|ZP_02440061.1| hypothetical protein CLOSS21_02551 [Clostridium sp. SS2/1] gi|317498398|ref|ZP_07956693.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium 5_1_63FAA] gi|167710337|gb|EDS20916.1| hypothetical protein CLOSS21_02551 [Clostridium sp. SS2/1] gi|291561010|emb|CBL39810.1| ribosome-associated GTPase EngA [butyrate-producing bacterium SSC/2] gi|316894292|gb|EFV16479.1| ribosome-associated GTPase EngA [Lachnospiraceae bacterium 5_1_63FAA] Length = 440 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 9/131 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G+ N GKSSLIN L+ L + A ++ + +K N + Sbjct: 178 PRVAIIGKPNAGKSSLINKLLGEDRLIVSDIAGTTRDAID-------TTVKRNGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + ++R ++ L+ID G+ + D + ++ Sbjct: 231 DTAGLRKKARVKEDIERYS--VIRTVAAVERCDVAILVIDAEEGITEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKID 160 I + K D Sbjct: 289 KGMIIAVNKWD 299 >gi|160872137|ref|ZP_02062269.1| GTP-binding protein EngA [Rickettsiella grylli] gi|159120936|gb|EDP46274.1| GTP-binding protein EngA [Rickettsiella grylli] Length = 455 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 20/164 (12%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEI--AFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 +FT A I I L KA P+I A G+ NVGKS+L+N ++ + + + PG Sbjct: 173 VFTHGACIKTLTAEHI-LSEKAIKPKIKVAIVGKPNVGKSTLLNRILGEERVI-VFDQPG 230 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMA----LVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 T+ ++ N++ +D G + +D + +++ L Sbjct: 231 TTR----------DSIANDIEYRGQHYIFIDTAGIRRKSKTWEAIDKFS--VIKSLQAIE 278 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 V LLID + G+ + D + F+ + + I + K D LS Sbjct: 279 ASHVVLLLIDAQEGISEQDLHLLGFILESGKAVIIAVNKWDGLS 322 >gi|119953297|ref|YP_945506.1| GTP-binding protein EngA [Borrelia turicatae 91E135] gi|119862068|gb|AAX17836.1| GTP-binding protein [Borrelia turicatae 91E135] Length = 438 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 15/177 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I G+ N GKS+LIN L R+ ++ S G T+ FV F + N L+D Sbjct: 180 KIGLIGKPNSGKSTLINFLAGRE-VSIVSRVAGTTRD---FVKARF---QRNGKTFELID 232 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + + R L + V+LL+D + + D+ + + K+ Sbjct: 233 TAGIRRRARVNELIEHYS--VSRALRVIDMVDIVFLLVDVKEDLTAQDKKIAHYATKRGK 290 Query: 151 SYQIVLTKIDKLSPTTAQ-ETLE-KTKYLIRNYPTAHPE-VIPTSSVKRKGIEVLRK 204 IV TK D + + E L+ + K+ +P + ++ S+ +R+G++ L K Sbjct: 291 GIIIVFTKWDLVKSKSGYFEALKNRVKFF---FPILNFSPILRISAHRREGVDNLFK 344 >gi|154505327|ref|ZP_02042065.1| hypothetical protein RUMGNA_02842 [Ruminococcus gnavus ATCC 29149] gi|153794370|gb|EDN76790.1| hypothetical protein RUMGNA_02842 [Ruminococcus gnavus ATCC 29149] Length = 450 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA G+ NVGKSS++N L+ +N S+ G T+ + +K+ + Sbjct: 186 PKIAIVGKPNVGKSSIVNKLLG-ENRVIVSDIAGTTRDAI------DTAIKHEDREYIFI 238 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 239 DTAGLRRKNKIKEELERFS--IIRTVTAVERADVVLMVIDATEGVTEQDAKIAGIAHERG 296 Query: 150 VSYQIVLTKIDKLS 163 IV+ K D + Sbjct: 297 KGVIIVVNKWDAIE 310 >gi|125718602|ref|YP_001035735.1| GTP-binding protein EngA [Streptococcus sanguinis SK36] gi|166225867|sp|A3CPT0|DER_STRSV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|125498519|gb|ABN45185.1| GTP-binding protein, putative [Streptococcus sanguinis SK36] Length = 436 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|62948054|gb|AAH94391.1| Gnal1 protein [Mus musculus] Length = 492 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK + S PG T++ +F+ P Sbjct: 242 KDGVVTIGCIGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TP 290 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 291 SVKLCDCPG 299 >gi|72161252|ref|YP_288909.1| GTP-binding protein Era [Thermobifida fusca YX] gi|71914984|gb|AAZ54886.1| Small GTP-binding protein domain [Thermobifida fusca YX] Length = 315 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 9/63 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 + F GR NVGKS+L+N LV RK +A TS+ P T+ + V ++ + L +VD Sbjct: 24 VCFIGRPNVGKSTLMNALVGRK-VAITSDRPQTTRRTIRGIVHRENAQL-------IIVD 75 Query: 91 MPG 93 PG Sbjct: 76 TPG 78 >gi|47059187|ref|NP_997665.1| guanine nucleotide-binding protein-like 1 [Rattus norvegicus] gi|81872343|sp|Q6MG06|GNL1_RAT RecName: Full=Guanine nucleotide-binding protein-like 1 gi|46237666|emb|CAE84041.1| guanine nucleotide binding protein-like 1 [Rattus norvegicus] gi|125858757|gb|AAI29082.1| Guanine nucleotide binding protein-like 1 [Rattus norvegicus] gi|149031778|gb|EDL86713.1| guanine nucleotide binding protein-like 1 [Rattus norvegicus] Length = 607 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK + S PG T++ +F+ P Sbjct: 357 KDGVVTIGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TP 405 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 406 SVKLCDCPG 414 >gi|27544386|dbj|BAC54927.1| guanine nucleotide binding protein-like 1 [Homo sapiens] Length = 374 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK ++ S PG T++ +F+ P Sbjct: 171 KDGVVTIGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TP 219 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 220 SVKLCDCPG 228 >gi|309703375|emb|CBJ02713.1| putative GTP-binding protein [Escherichia coli ETEC H10407] Length = 348 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 30/196 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 95 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVQRF------RLSGHGHSMVIT 147 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF--SFLDK 147 D+PG G +R ++ L L E L V LI +D D F L + Sbjct: 148 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVD-DYFWRHILHR 200 Query: 148 KAVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 201 GHQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSAR 259 Query: 195 KRKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 260 TGWELDTLVSALMTAL 275 >gi|240145039|ref|ZP_04743640.1| GTP-binding protein Era [Roseburia intestinalis L1-82] gi|257202864|gb|EEV01149.1| GTP-binding protein Era [Roseburia intestinalis L1-82] gi|291535364|emb|CBL08476.1| GTP-binding protein Era [Roseburia intestinalis M50/1] gi|291538175|emb|CBL11286.1| GTP-binding protein Era [Roseburia intestinalis XB6B4] Length = 302 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ V D + +D Sbjct: 10 VTIIGRPNVGKSTLMNHLIGQK-IAITSNKPQTTRNRIQTVYTDMER-----GQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG A+ + G +V + + + L++ + + +Q + L K Sbjct: 64 PGIHKAK------NKLGEYMVNTAEHTLNEVDVILWLVEPSNFIGAGEQHIIEQLKKTKT 117 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D +S E ++ + + Y A E++P S+++ + ++ + I + + Sbjct: 118 PVILVINKVDTVSRDKILEFIDTYRKV---YDFA--EIVPASALRAQNLDTVLDMIFKYL 172 Query: 211 NY 212 Y Sbjct: 173 PY 174 >gi|39645120|gb|AAH63657.1| GNL1 protein [Homo sapiens] Length = 481 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK + S PG T++ +F+ P++ L D Sbjct: 237 IGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TPSVKLCD 285 Query: 91 MPG 93 PG Sbjct: 286 CPG 288 >gi|323144163|ref|ZP_08078799.1| ribosome biogenesis GTPase Era [Succinatimonas hippei YIT 12066] gi|322416071|gb|EFY06769.1| ribosome biogenesis GTPase Era [Succinatimonas hippei YIT 12066] Length = 301 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T++ + + + A+ VD Sbjct: 10 VALIGRPNVGKSTLMNHLIGQK-VSITSRRPQTTRNRVLGI-----DTQGEYQAV-FVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 P G + K+ ++ L+ R S + + L++D D+ VFS ++ V Sbjct: 63 P--GLHKEEKRAINR---LMNRAAESALGDVELILLVVDATLWTDD-DEMVFSKIENTKV 116 Query: 151 SYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KIDKL T +E+ + + ++P S+++ ++ L+K + E+ Sbjct: 117 PVVLVINKIDKLHDKATLLPLIERLSKRV-----SFKAIVPVSALRSTNLDDLKKLVFES 171 Query: 210 I 210 + Sbjct: 172 L 172 >gi|241896009|ref|ZP_04783305.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313] gi|241870740|gb|EER74491.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313] Length = 290 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 16/92 (17%) Query: 6 IFTKSAWIFL----RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 I TK+A + L + + E G+ KA +A G NVGKS+L+N LV KN+A T + Sbjct: 97 IITKAARVVLADKWQNLEEKGVQDKAIRALVA--GIPNVGKSTLLNHLVT-KNVAITGDR 153 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 PG T+ L + K +NL+ L+D PG Sbjct: 154 PGVTKKLQWL--KTPTNLE-------LLDTPG 176 >gi|168985903|emb|CAQ09920.1| guanine nucleotide binding protein-like 1 [Homo sapiens] Length = 407 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK + S PG T++ +F+ P++ L D Sbjct: 163 IGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TPSVKLCD 211 Query: 91 MPG 93 PG Sbjct: 212 CPG 214 >gi|82779259|ref|YP_405608.1| selenocysteinyl-tRNA-specific translation factor [Shigella dysenteriae Sd197] gi|309784218|ref|ZP_07678857.1| selenocysteine-specific translation elongation factor [Shigella dysenteriae 1617] gi|81243407|gb|ABB64117.1| selenocysteinyl-tRNA-specific translation factor [Shigella dysenteriae Sd197] gi|308927725|gb|EFP73193.1| selenocysteine-specific translation elongation factor [Shigella dysenteriae 1617] Length = 614 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 32/55 (58%) Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + LTK D++ E + K ++R Y A ++ T++++ +GI+ LR+ +L+ Sbjct: 109 VALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAAIEGRGIDALREHLLQ 163 >gi|325696369|gb|EGD38260.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK160] Length = 436 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGMIIVVNKWD---------TLEKDNHTMKDW 309 >gi|325695118|gb|EGD37020.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK150] Length = 436 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|324991285|gb|EGC23218.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK353] Length = 436 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGMIIVVNKWD---------TLEKDNHTMKDW 309 >gi|315924473|ref|ZP_07920695.1| ribosome-associated GTPase EngA [Pseudoramibacter alactolyticus ATCC 23263] gi|315622352|gb|EFV02311.1| ribosome-associated GTPase EngA [Pseudoramibacter alactolyticus ATCC 23263] Length = 440 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 11/153 (7%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G IA G+ N GKS+L+N L+ +N S+ PG T+ S ++ Sbjct: 175 GSLHIAVVGKPNAGKSTLVNQLIG-ENRMIVSDIPGTTRD------AIDSKIERGGVEYT 227 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G V+ + I+R ++ V ++++ + GV + D + Sbjct: 228 FIDTAGLRRKSKIADEVERYS--IIRAIAAVDRADVVLMMVNAQTGVTEQDSKIAGIAHN 285 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + + IV+ K D + T +T++K IRN Sbjct: 286 RFIPTIIVVNKWDLIEKDT--KTMQKMTGDIRN 316 >gi|167766294|ref|ZP_02438347.1| hypothetical protein CLOSS21_00798 [Clostridium sp. SS2/1] gi|167712013|gb|EDS22592.1| hypothetical protein CLOSS21_00798 [Clostridium sp. SS2/1] gi|291559076|emb|CBL37876.1| iron-only hydrogenase maturation protein HydF [butyrate-producing bacterium SSC/2] Length = 402 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 20/140 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA G+ N GKSS+IN + N++ LA SN G T V K L L Sbjct: 7 PRGDRIHIALFGKRNAGKSSVINAMTNQE-LAIVSNVKGTTTDP---VYKAMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL----RCVYLLIDCRHGVKQIDQD 140 + ++D PG +D G L + + + + +++D G+ + ++D Sbjct: 61 PVVMIDTPG----------LDDEGELGEKRVKKAKEVLAKADIALVIMDATAGMTEFEED 110 Query: 141 VFSFLDKKAVSYQIVLTKID 160 + ++ + + Y V K+D Sbjct: 111 MIRLIEDRKIPYLKVYNKMD 130 >gi|296197592|ref|XP_002746348.1| PREDICTED: guanine nucleotide-binding protein-like 1-like isoform 1 [Callithrix jacchus] Length = 607 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 363 IGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|171184837|ref|YP_001793756.1| small GTP-binding protein [Thermoproteus neutrophilus V24Sta] gi|170934049|gb|ACB39310.1| small GTP-binding protein [Thermoproteus neutrophilus V24Sta] Length = 568 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 38/182 (20%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P A +G +NVGKSSL L RT+N PG T + + ++ + +V Sbjct: 2 PRYALAGPANVGKSSLFYALTGIY--VRTANYPGTTVEIR------RALIRRGGVTIEVV 53 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY-------LLIDCRHGVKQIDQDVF 142 D+PG ++P VD ER R + +++ H K+ + Sbjct: 54 DLPGIINIKSP---VDE---------DERVAFREAFEGNYDGVVVVAAPHATKEAIELAK 101 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 KK V + V +D P +E L KT + V+ TS+VKR GI+ L Sbjct: 102 LVSQKKPVIF--VYNMVDLAKPPWTEEELSKTLGV---------PVVFTSAVKRVGIDKL 150 Query: 203 RK 204 + Sbjct: 151 TE 152 >gi|157150518|ref|YP_001449828.1| GTP-binding protein EngA [Streptococcus gordonii str. Challis substr. CH1] gi|189037167|sp|A8AVL8|DER_STRGC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157075312|gb|ABV09995.1| GTP-binding protein engA [Streptococcus gordonii str. Challis substr. CH1] Length = 436 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|157871183|ref|XP_001684141.1| GTP-binding protein-like protein; guanine nucleotide-binding protein-like protein [Leishmania major] gi|68127209|emb|CAJ05239.1| guanine nucleotide-binding protein-like protein [Leishmania major strain Friedlin] Length = 902 Score = 36.6 bits (83), Expect = 2.5, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVD 90 I F G NVGKSSL+N + K + S PG T+H+ VP + L + P +AL Sbjct: 712 IGFVGHPNVGKSSLLNCIRGTK-VVSVSATPGHTKHMQTIPVPSEHLTLV-DCPGLAL-- 767 Query: 91 MPGYGYAR 98 P +G R Sbjct: 768 -PVFGVPR 774 >gi|15277234|dbj|BAB63327.1| GTP-binding protein [Homo sapiens] gi|86197946|dbj|BAE78611.1| guanine nucleotide binding protein-like 1 [Homo sapiens] Length = 421 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK + S PG T++ +F+ P++ L D Sbjct: 177 IGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TPSVKLCD 225 Query: 91 MPG 93 PG Sbjct: 226 CPG 228 >gi|117926861|ref|YP_867478.1| small GTP-binding protein [Magnetococcus sp. MC-1] gi|117610617|gb|ABK46072.1| small GTP-binding protein [Magnetococcus sp. MC-1] Length = 495 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 11/154 (7%) Query: 19 PEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE+ P+ GP +A G N GKSSL+N LV + L S G T+ + VP + Sbjct: 200 PEVAREPRFKGPLRLAVVGCPNAGKSSLVNRLVGEERLL-ASEIAGTTRD-SIDVPITDA 257 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N + + LVD G V+ + + ER+ + L++D + GV Sbjct: 258 NGET----VILVDTAGIRRKSRVSLRVEKFAVIAALKSMERAEV--AILVLDAQRGVTDQ 311 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL 171 D+ + S+ + K D + P Q+T+ Sbjct: 312 DKRIGSYALDAGCGLIFAVNKWDTMPP--GQQTI 343 >gi|323350996|ref|ZP_08086653.1| ribosome-associated GTPase EngA [Streptococcus sanguinis VMC66] gi|322122720|gb|EFX94429.1| ribosome-associated GTPase EngA [Streptococcus sanguinis VMC66] Length = 436 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|300927013|ref|ZP_07142769.1| hypothetical protein HMPREF9548_05002 [Escherichia coli MS 182-1] gi|300416990|gb|EFK00301.1| hypothetical protein HMPREF9548_05002 [Escherichia coli MS 182-1] Length = 309 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 30/196 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 56 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 108 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF--SFLDK 147 D+PG G +R ++ L L E L V LI +D D F L + Sbjct: 109 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVD-DYFWRHILHR 161 Query: 148 KAVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 162 GHQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSAR 220 Query: 195 KRKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 221 TGWELDTLVSALMTAL 236 >gi|226954466|ref|ZP_03824930.1| GTP-binding protein EngA [Acinetobacter sp. ATCC 27244] gi|294651482|ref|ZP_06728795.1| GTP-binding protein EngA [Acinetobacter haemolyticus ATCC 19194] gi|226834815|gb|EEH67198.1| GTP-binding protein EngA [Acinetobacter sp. ATCC 27244] gi|292822632|gb|EFF81522.1| GTP-binding protein EngA [Acinetobacter haemolyticus ATCC 19194] Length = 469 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ + + + PG T+ + ++P + + L+D Sbjct: 179 LAIIGRPNVGKSTLVNRLLGEERVV-AFDQPGTTRD-SIYIP-----FERDGRQYTLIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + IV+ L V +++D R G+ + D + + + + Sbjct: 232 AGVRRKGKVDEMIEKFS--IVKTLQAMKDANVVVIVVDAREGIVEQDLHLIGYALEAGRA 289 Query: 152 YQIVLTKIDKLS 163 I + K D ++ Sbjct: 290 MVIAINKWDNMT 301 >gi|126695547|ref|YP_001090433.1| tRNA modification GTPase TrmE [Prochlorococcus marinus str. MIT 9301] gi|166234804|sp|A3PAQ7|MNME_PROM0 RecName: Full=tRNA modification GTPase mnmE gi|126542590|gb|ABO16832.1| putative thiophen / furan oxidation protein [Prochlorococcus marinus str. MIT 9301] Length = 460 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 16/80 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAMAL 88 IA G++NVGKSSL+N+L +K A +N PG T+ +N + N++P M + Sbjct: 230 IALIGKTNVGKSSLLNLLA-KKEKAIVTNIPGTTRDVIEVNLTI--------NDIP-MKI 279 Query: 89 VDMPGYGYARAPKKNVDSWG 108 +D G R + ++S G Sbjct: 280 IDTAGI---RETYEQIESIG 296 >gi|114051608|ref|NP_001040604.1| guanine nucleotide-binding protein-like 1 [Macaca mulatta] gi|75055319|sp|Q5TM59|GNL1_MACMU RecName: Full=Guanine nucleotide-binding protein-like 1 gi|75077014|sp|Q4R8D2|GNL1_MACFA RecName: Full=Guanine nucleotide-binding protein-like 1 gi|55700812|dbj|BAD69767.1| guanine nucleotide binding protein-like 1 [Macaca mulatta] gi|67968559|dbj|BAE00640.1| unnamed protein product [Macaca fascicularis] Length = 607 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 363 IGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|73972063|ref|XP_532055.2| PREDICTED: similar to guanine nucleotide binding protein-like 1 isoform 1 [Canis familiaris] Length = 421 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK + S PG T++ +F+ P++ L D Sbjct: 177 IGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TPSVKLCD 225 Query: 91 MPG 93 PG Sbjct: 226 CPG 228 >gi|75909106|ref|YP_323402.1| GTP-binding protein EngA [Anabaena variabilis ATCC 29413] gi|123609166|sp|Q3M929|DER_ANAVT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|75702831|gb|ABA22507.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC 29413] Length = 453 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 22/170 (12%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ +P L + +IA GR NVGKSSL+N + + + + ++ F+ Sbjct: 161 LIKHLPPTTELEENNEIKIAIIGRPNVGKSSLLNAFAGEERVIVSPISGTTRDAIDTFIE 220 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL--IVRYLSERSTLRCVYLLIDCR 131 ++ N + L+D G KK++D I R V L+ID Sbjct: 221 RNGQNYR-------LIDTAGI----RKKKSIDYGTEFFSINRAFKAIRRADVVLLVIDAL 269 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 GV + DQ + + + + +V+ K D +EK Y I +Y Sbjct: 270 DGVTEQDQKLAGRILDEGKACVVVVNKWD---------AVEKDSYTIYDY 310 >gi|167037254|ref|YP_001664832.1| GTP-binding protein EngA [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256752010|ref|ZP_05492879.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1] gi|320115673|ref|YP_004185832.1| ribosome-associated GTPase EngA [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687651|sp|B0K8N3|DER_THEP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166856088|gb|ABY94496.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749120|gb|EEU62155.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1] gi|319928764|gb|ADV79449.1| ribosome-associated GTPase EngA [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 439 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA G+ NVGKSSL+N ++ + + SN PG T+ + FS N L+D Sbjct: 178 KIAVIGKPNVGKSSLVNKILGEERVI-VSNIPGTTRDA---IDTPFSKDGKN---YVLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++++ + L ERS + C+ L+ID G + D + + + Sbjct: 231 TAGIRRKSRISESIERYSVLRALAAIERSDI-CL-LMIDATEGPTEQDTKIAGYAFENGK 288 Query: 151 SYQIVLTKIDKL 162 IV+ K D + Sbjct: 289 GIIIVVNKWDAI 300 >gi|71404886|ref|XP_805106.1| translation initiation factor IF-2 [Trypanosoma cruzi strain CL Brener] gi|70868387|gb|EAN83255.1| translation initiation factor IF-2, putative [Trypanosoma cruzi] Length = 833 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 31/156 (19%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKDF-------------SNLKN 81 G + GK+SL++ + R + A G TQ + F P++ NL Sbjct: 252 GHVDTGKTSLLDRI--RSTNVQGGEAGGITQQIGATFFPREALVGATADINKKYRYNL-- 307 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 N+P + ++D PG+ N+ S G S L++D HG++ ++ Sbjct: 308 NVPGLLVIDTPGHESF----TNLRSRGS---------SLCDIAILVVDIMHGLEPQTRES 354 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 L +K + I L K+D+L TA E ++ + L Sbjct: 355 IRLLRQKKCPFIIALNKVDRLYAWTANENMDIEQTL 390 >gi|195376097|ref|XP_002046833.1| GJ13104 [Drosophila virilis] gi|194153991|gb|EDW69175.1| GJ13104 [Drosophila virilis] Length = 1172 Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 31/141 (21%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFSNLKNNL 83 G + GK+ +++ L R+ + S A G TQ + VP K+ ++ ++ L Sbjct: 590 GHVDTGKTKILDKL--RRTHVQDSEAGGITQQIGATNVPIDAIKEQTKYVKNVASFEHRL 647 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDV 141 P + ++D PG+ +S+ L R + C L++D HG++ + Sbjct: 648 PGLLIIDTPGH----------ESFSNL-----RNRGSSLCDIAILVVDIMHGLEPQTLES 692 Query: 142 FSFLDKKAVSYQIVLTKIDKL 162 L KK + + L KID+L Sbjct: 693 IQLLKKKKCPFIVALNKIDRL 713 >gi|149411407|ref|XP_001511653.1| PREDICTED: similar to Large subunit GTPase 1 homolog (S. cerevisiae) [Ornithorhynchus anatinus] Length = 703 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 426 KEGELTVGLVGYPNVGKSSTINTIIGNKKVS-VSATPGHTKHFQTLYVE---------PG 475 Query: 86 MALVDMPG 93 + L D PG Sbjct: 476 LCLCDCPG 483 >gi|10177528|dbj|BAB10923.1| GTP-binding protein-like [Arabidopsis thaliana] Length = 353 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 26/187 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G NVGKS+L N ++ +K ++ ++ P T+H L ++ M L Sbjct: 58 VAVVGMPNVGKSTLSNQMIGQK-ISIVTDKPQTTRHRILGICSSPEYQ--------MILY 108 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLID-CRH--GVKQIDQDVFSFL 145 D PG +K + ++++ + + + CV +L+D C+ ++++ ++ L Sbjct: 109 DTPG-----VIEKKMHRLDTMMMKNVRDAAINADCVVILVDACKTPTNIEEVLKEGLGDL 163 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +KK +V+ K D + P + LE + T EVIP S+ GIE +++ Sbjct: 164 EKKP-PMLLVMNKKDLIKPGEIAKKLEWYEKF-----TDVDEVIPVSAKYGHGIEDVKEW 217 Query: 206 ILETINY 212 IL + + Sbjct: 218 ILSKLPF 224 >gi|322826999|gb|EFZ31364.1| translation initiation factor IF-2, putative [Trypanosoma cruzi] Length = 833 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 31/156 (19%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKDF-------------SNLKN 81 G + GK+SL++ + R + A G TQ + F P++ NL Sbjct: 252 GHVDTGKTSLLDRI--RSTNVQGGEAGGITQQIGATFFPREALVGATADINKKYRYNL-- 307 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 N+P + ++D PG+ N+ S G S L++D HG++ ++ Sbjct: 308 NVPGLLVIDTPGHESF----TNLRSRGS---------SLCDIAILVVDIMHGLEPQTRES 354 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 L +K + I L K+D+L TA E ++ + L Sbjct: 355 IRLLRQKKCPFIIALNKVDRLYAWTANENMDIEQTL 390 >gi|301786993|ref|XP_002928908.1| PREDICTED: guanine nucleotide-binding protein-like 1-like [Ailuropoda melanoleuca] gi|281337513|gb|EFB13097.1| hypothetical protein PANDA_018969 [Ailuropoda melanoleuca] Length = 607 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 363 IGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|227893492|ref|ZP_04011297.1| GTP-binding protein EngA [Lactobacillus ultunensis DSM 16047] gi|227864717|gb|EEJ72138.1| GTP-binding protein EngA [Lactobacillus ultunensis DSM 16047] Length = 435 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A GR NVGKS+L N ++N++ LA + PG T+ N+ Sbjct: 4 PVVAIVGRPNVGKSTLFNRIINQR-LAIVEDKPGVTRDRNY 43 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 13/142 (9%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I+FS GR NVGKSS++N L+ + +N G T+ P + +K + A + Sbjct: 175 ISFSVIGRPNVGKSSIVNKLLGEDRVI-VANEEGTTRDA-VDTPFTKNGVKYKVVDTAGI 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G Y + K +V +R +S V L++D G+++ D+ V + + Sbjct: 233 RRRGKVYEKTEKYSV-------LRAMSAIERSDVVLLVLDASTGIREQDKHVAGYAHEAG 285 Query: 150 VSYQIVLTKID--KLSPTTAQE 169 IV+ K D K + T+A+E Sbjct: 286 RGIIIVVNKWDLLKKNSTSAKE 307 >gi|170720260|ref|YP_001747948.1| GTP-binding protein Era [Pseudomonas putida W619] gi|226741227|sp|B1J4E1|ERA_PSEPW RecName: Full=GTPase Era gi|169758263|gb|ACA71579.1| GTP-binding protein Era [Pseudomonas putida W619] Length = 300 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 12 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGDVQAIYVD 63 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG A N RY++ ++ L+ V ++I + D+D + Sbjct: 64 TPGMHKANDKALN---------RYMNRNASAALKDVDVVIFVVDRTRWTDEDQLVLERVQ 114 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ +++ K D++ E + ++L P A EV+P S+ + +E L I Sbjct: 115 YVTGPLIIAVNKTDRMDEKA--ELIPHLQWLQEQLPNA--EVVPISAQQGHNLEALEALI 170 >gi|333031364|ref|ZP_08459425.1| tRNA modification GTPase mnmE [Bacteroides coprosuis DSM 18011] gi|332741961|gb|EGJ72443.1| tRNA modification GTPase mnmE [Bacteroides coprosuis DSM 18011] Length = 465 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 25/195 (12%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N L+N ++ A SN G T+ V +D N+ Sbjct: 214 VGNAIKNGVP-VAIIGETNAGKSTLLNALLN-EDKAIVSNIHGTTRD----VIEDTMNIG 267 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V +ID +QI Q Sbjct: 268 G--ITFRFIDTAGI---RETHDTIESLG--IERTFQKLDQAEIVLWVIDAPTATEQI-QQ 319 Query: 141 VFSFLDKKAVSYQIVL----TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + + +A S Q++L +++ S E L +T +YP+ I S+ ++ Sbjct: 320 LAEKIVPRAQSKQLILVFNKSELINESERKGLEALAQT-----HYPSLTS--IFISAKEK 372 Query: 197 KGIEVLRKAILETIN 211 +G+E L K + + N Sbjct: 373 EGVEQLEKLLTNSAN 387 >gi|319892259|ref|YP_004149134.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus pseudintermedius HKU10-03] gi|317161955|gb|ADV05498.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus pseudintermedius HKU10-03] Length = 290 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 14/73 (19%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLK 80 GL P+A I G NVGKS+LIN L NR ++A+T N PG T+ + V K Sbjct: 115 GLKPRAIRAMIV--GIPNVGKSTLINKLANR-SIAQTGNKPGVTKQQQWIKVGK------ 165 Query: 81 NNLPAMALVDMPG 93 ++ L+D PG Sbjct: 166 ----SLQLLDTPG 174 >gi|300173424|ref|YP_003772590.1| GTP-binding protein EngA [Leuconostoc gasicomitatum LMG 18811] gi|299887803|emb|CBL91771.1| GTP-binding protein EngA [Leuconostoc gasicomitatum LMG 18811] Length = 437 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 18/154 (11%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL---NFFVPKDFSNLKNNLPAM 86 I FS GR NVGKSS++N ++ + S+ G T+ F P+ Sbjct: 176 IKFSIIGRPNVGKSSIVNAMLGEDRVI-VSSIEGTTRDAIDSRFVTPEG--------DEF 226 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VD G +N + + ++R L + ++ID G+++ D+ V F Sbjct: 227 IMVDTAGMRKRGKVYENTEKYS--VMRALKAIDNSNVILMVIDAEAGIREQDKHVAGFAH 284 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + + IV+ K D + T+++ + LIR+ Sbjct: 285 EAGRAMIIVVNKWDAVEKD--DHTMKEFEDLIRS 316 >gi|257784594|ref|YP_003179811.1| GTP-binding protein Era [Atopobium parvulum DSM 20469] gi|257473101|gb|ACV51220.1| GTP-binding protein Era [Atopobium parvulum DSM 20469] Length = 312 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 15/149 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR +VGKS+L+N + +K + A + V + S L +VD Sbjct: 22 VALVGRPSVGKSTLLNACMGQKVAIASPVAQTTRRRFRAVVNGENSQL-------VIVDT 74 Query: 92 PGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK D+ G + + L E + + LID V + D+ V + +++ Sbjct: 75 PGL---HKPK---DALGKELNKAALGELNDADVIAFLIDATKPVGRGDEWVANHVEQAHA 128 Query: 151 SYQ-IVLTKIDKLSPTTAQETLEKTKYLI 178 +++ +++TK D +P E L+ + L+ Sbjct: 129 AFKLLIITKADIATPEQVAEQLKAAQTLV 157 >gi|227510314|ref|ZP_03940363.1| GTP-binding protein EngA [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189966|gb|EEI70033.1| GTP-binding protein EngA [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 435 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 22/189 (11%) Query: 20 EIGLLPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF- 76 E G +P +I FS GR NVGKSSL+N ++ +N S+ G T+ + F Sbjct: 166 ETGNVPN---DDIRFSIIGRPNVGKSSLVNAILG-ENRVIVSDVAGTTRDA---IDTRFE 218 Query: 77 -SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 N+K +VD G +N + + ++R + + +I+ G++ Sbjct: 219 ADNIK-----FTMVDTAGIRKRGKVYENTERYS--VMRAMKAIDQSDVILFVINAEEGIR 271 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSS 193 + D+ V + + + V+ K D L T T + + LIRN A+ +I S+ Sbjct: 272 EQDKKVAGYAHEAGKAIITVVNKWDMLKKT--NHTQQDFETLIRNEFQYMAYSPIIFVSA 329 Query: 194 VKRKGIEVL 202 ++ IE L Sbjct: 330 KTKQRIEQL 338 >gi|208434748|ref|YP_002266414.1| GTP-binding protein-like protein [Helicobacter pylori G27] gi|238058976|sp|B5Z7J9|DER_HELPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|208432677|gb|ACI27548.1| GTP-binding protein-like protein [Helicobacter pylori G27] Length = 460 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 200 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 252 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 253 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 309 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 310 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 364 >gi|30584969|gb|AAP36757.1| Homo sapiens guanine nucleotide binding protein-like 1 [synthetic construct] gi|60654029|gb|AAX29707.1| guanine nucleotide binding protein-like 1 [synthetic construct] gi|60654031|gb|AAX29708.1| guanine nucleotide binding protein-like 1 [synthetic construct] Length = 608 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 363 IGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|330467062|ref|YP_004404805.1| GTP-binding protein Der [Verrucosispora maris AB-18-032] gi|328810033|gb|AEB44205.1| GTP-binding protein Der [Verrucosispora maris AB-18-032] Length = 467 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 W+ LR P++ GP P +A GR NVGKS+L+N ++ R+ A + PG T+ Sbjct: 5 DGWVELR-EPDLDTEEPTGPQPVVAVVGRPNVGKSTLVNRIIGRRQ-AVVEDVPGVTR 60 >gi|300819090|ref|ZP_07099293.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|300528390|gb|EFK49452.1| conserved hypothetical protein [Escherichia coli MS 107-1] Length = 290 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVYAGTREVQRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQRVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|261211554|ref|ZP_05925842.1| GTP-binding protein Era [Vibrio sp. RC341] gi|260839509|gb|EEX66135.1| GTP-binding protein Era [Vibrio sp. RC341] Length = 324 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V + A+ VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETE-----GKYQAI-YVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFTKLQKANF 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + P +++P S+ + K +VL+K + E + Sbjct: 140 PVVLCVNKVDQVKDRN--EVMLHMLELSKRMPFV--DIVPISAKQGKNTDVLKKHVREHL 195 >gi|242222655|ref|XP_002477038.1| predicted protein [Postia placenta Mad-698-R] gi|220723635|gb|EED77766.1| predicted protein [Postia placenta Mad-698-R] Length = 382 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 14/64 (21%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVPKDFSNLKNNLPAMALV 89 I G+ NVGKSSL+N L + + S PG+T+H F+ P+ + LV Sbjct: 315 IGLIGQPNVGKSSLLNALFGTHKV-KASKTPGKTKHFQTLFWTPE-----------VRLV 362 Query: 90 DMPG 93 D PG Sbjct: 363 DCPG 366 >gi|32127792|dbj|BAC78181.1| GTP-binding protein [Pan troglodytes] Length = 421 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK + S PG T++ +F+ P++ L D Sbjct: 177 IGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TPSVKLCD 225 Query: 91 MPG 93 PG Sbjct: 226 CPG 228 >gi|431091|gb|AAA66492.1| GTP-binding protein [Homo sapiens] Length = 430 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK + S PG T++ +F+ P Sbjct: 180 KDGVVTIGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TP 228 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 229 SVKLCDCPG 237 >gi|332344899|gb|AEE58233.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 290 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 77/195 (39%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEITPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRNILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ +KT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIRDKTEAVFRLFRPVHP-VVAVSART 202 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 203 GWELDTLVSALMTAL 217 >gi|325066682|ref|ZP_08125355.1| ferrous iron transport protein B [Actinomyces oris K20] Length = 709 Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 9/74 (12%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 AG P +A +G N GK+S+ N L A+T N PG T V + K + Sbjct: 38 AGAPRVALAGAPNAGKTSIYNALTGLH--AKTGNYPGVT------VQRSMGTCKVGGKTL 89 Query: 87 ALVDMPGYGYARAP 100 + D+PG Y+ P Sbjct: 90 TIEDLPG-AYSLDP 102 >gi|299822634|ref|ZP_07054520.1| ribosome biogenesis GTP-binding protein YlqF [Listeria grayi DSM 20601] gi|299816163|gb|EFI83401.1| ribosome biogenesis GTP-binding protein YlqF [Listeria grayi DSM 20601] Length = 289 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 12/70 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGY 94 G NVGKS+LIN L +KN+ART N PG T+ + V K ++ L+D PG Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTKAQQWIKVEK----------SLELLDTPGI 175 Query: 95 GYARAPKKNV 104 + + ++V Sbjct: 176 LWPKFEDQSV 185 >gi|87125615|ref|ZP_01081460.1| putative GTP-binding protein [Synechococcus sp. RS9917] gi|86166915|gb|EAQ68177.1| putative GTP-binding protein [Synechococcus sp. RS9917] Length = 455 Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 13/140 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A P ++A GR NVGKSSL+N + R +P R + + L+ N + Sbjct: 174 EAEPIQMAIIGRPNVGKSSLLNAICGEP---RAIVSPIRGTTRDTI----DTRLERNGLS 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD G R+ + +G I R ERS + CV L+ID GV + DQ + Sbjct: 227 WRLVDTAGIRRRRSVHYGPEFFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAG 282 Query: 144 FLDKKAVSYQIVLTKIDKLS 163 ++++ + +V+ K D + Sbjct: 283 RIEEEGRACVVVVNKWDAVE 302 >gi|325265091|ref|ZP_08131818.1| ribosome-associated GTPase EngA [Clostridium sp. D5] gi|324029781|gb|EGB91069.1| ribosome-associated GTPase EngA [Clostridium sp. D5] Length = 442 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 18/160 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L+ +N S+ G T+ + + ++ + Sbjct: 178 PRIAIVGKPNVGKSSIINKLLG-ENRVIVSDVAGTTRDAI------DTEILHDGKEYIFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKSRIKEELERYS--IIRTVTAVERADVVLIVIDAEEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 IV+ K D +EK +R Y +V+ Sbjct: 289 KGIIIVVNKWD---------AVEKNDKTMREYDNKIRQVL 319 >gi|194379604|dbj|BAG63768.1| unnamed protein product [Homo sapiens] Length = 605 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 361 IGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 409 Query: 91 MPG 93 PG Sbjct: 410 CPG 412 >gi|68067810|ref|XP_675838.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56495248|emb|CAH95459.1| conserved hypothetical protein [Plasmodium berghei] Length = 584 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 9/62 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS+IN + K + S PG+T+H F + N L D Sbjct: 340 VGFIGFPNVGKSSIINSIFGEKKVG-VSRQPGKTKH--------FQTISLNEYGFTLCDC 390 Query: 92 PG 93 PG Sbjct: 391 PG 392 >gi|38788319|ref|NP_005266.2| guanine nucleotide-binding protein-like 1 [Homo sapiens] gi|158939140|sp|P36915|GNL1_HUMAN RecName: Full=Guanine nucleotide-binding protein-like 1; AltName: Full=GTP-binding protein HSR1 gi|15530323|gb|AAH13959.1| Guanine nucleotide binding protein-like 1 [Homo sapiens] gi|22450779|gb|AAH18366.1| Guanine nucleotide binding protein-like 1 [Homo sapiens] gi|30582135|gb|AAP35294.1| guanine nucleotide binding protein-like 1 [Homo sapiens] gi|55961299|emb|CAI18152.1| guanine nucleotide binding protein-like 1 [Homo sapiens] gi|55961371|emb|CAI17831.1| guanine nucleotide binding protein-like 1 [Homo sapiens] gi|56207628|emb|CAI18558.1| guanine nucleotide binding protein-like 1 [Homo sapiens] gi|61362664|gb|AAX42260.1| guanine nucleotide binding protein-like 1 [synthetic construct] gi|61362669|gb|AAX42261.1| guanine nucleotide binding protein-like 1 [synthetic construct] gi|119623699|gb|EAX03294.1| guanine nucleotide binding protein-like 1, isoform CRA_a [Homo sapiens] gi|119623700|gb|EAX03295.1| guanine nucleotide binding protein-like 1, isoform CRA_a [Homo sapiens] gi|123292145|emb|CAM26012.1| guanine nucleotide binding protein-like 1 [Homo sapiens] gi|123979720|gb|ABM81689.1| guanine nucleotide binding protein-like 1 [synthetic construct] gi|123994501|gb|ABM84852.1| guanine nucleotide binding protein-like 1 [synthetic construct] gi|123999018|gb|ABM87095.1| guanine nucleotide binding protein-like 1 [synthetic construct] gi|168983709|emb|CAQ08501.1| guanine nucleotide binding protein-like 1 [Homo sapiens] gi|168984904|emb|CAQ07868.1| guanine nucleotide binding protein-like 1 [Homo sapiens] gi|168984988|emb|CAQ09053.1| guanine nucleotide binding protein-like 1 [Homo sapiens] Length = 607 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 363 IGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|88797949|ref|ZP_01113536.1| GTP-binding protein Era [Reinekea sp. MED297] gi|88779146|gb|EAR10334.1| GTP-binding protein Era [Reinekea sp. MED297] Length = 302 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 78/177 (44%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H + + M VD Sbjct: 14 VAIVGRPNVGKSTLMNHLLGQK-ISITSRKPQTTRHQILGI------WTEDKTQMVFVDT 66 Query: 92 PGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG G +A + ++ + + + V ++D R D V L + Sbjct: 67 PGMHRGQEKAINRAMNKAADTAL------TDIDAVIFVVD-RTVFTDEDAWVLEKLKRSR 119 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+D+L Q L + + + A EVIP S+++ ++ L +++ Sbjct: 120 APVILVINKVDQLDD--KQSLLPHIEAMSEKF--AFKEVIPVSALQGHNLDRLTESL 172 >gi|66475520|ref|XP_627576.1| Fun12p GTpase; translation initiation factor IF2 [Cryptosporidium parvum Iowa II] gi|46229287|gb|EAK90136.1| Fun12p GTpase; translation initiation factor IF2 [Cryptosporidium parvum Iowa II] Length = 896 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 13/137 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMA 87 P G + GK+ L++ + RK + + A G TQ + +F P+ S + A Sbjct: 304 PVCCILGHVDTGKTKLLDKM--RKTNVQDNEAGGITQQIGATYFPPEMLSEQVKKVEADF 361 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFL 145 + +PG + +D+ G L R + C L++D HG++ ++ L Sbjct: 362 ELQIPGLLF-------IDTPGHESFNNLRSRGSSLCDIAVLVVDIMHGLEPQTRESIGLL 414 Query: 146 DKKAVSYQIVLTKIDKL 162 + + I L KID+L Sbjct: 415 RSRKCPFIIALNKIDRL 431 >gi|301059965|ref|ZP_07200844.1| ribosome-associated GTPase EngA [delta proteobacterium NaphS2] gi|300445932|gb|EFK09818.1| ribosome-associated GTPase EngA [delta proteobacterium NaphS2] Length = 435 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 13/133 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP IA GR NVGKS+L N L R A + PG T+ + + + M L Sbjct: 2 PPVIAIVGRPNVGKSTLFNRL-TRSKRALVDDRPGITRD------RLHGTISHEGLQMTL 54 Query: 89 VDMPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 VD G+ + P + G+ + + + ++D R GV D ++ L + Sbjct: 55 VDTGGFEDLGQDPLQK-----GVRAQVETAIQEADRIIFMVDGREGVLPGDDEMAHLLRR 109 Query: 148 KAVSYQIVLTKID 160 +V+ KID Sbjct: 110 MQKRVFLVVNKID 122 >gi|115392105|ref|NP_001065264.1| guanine nucleotide-binding protein-like 1 [Pan troglodytes] gi|158518630|sp|Q7YR35|GNL1_PANTR RecName: Full=Guanine nucleotide-binding protein-like 1 gi|90960913|dbj|BAE92806.1| guanine nucleotide binding protein-like 1 [Pan troglodytes] gi|90960916|dbj|BAE92808.1| guanine nucleotide binding protein-like 1 [Pan troglodytes] Length = 607 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 363 IGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|190360665|ref|NP_001121950.1| guanine nucleotide-binding protein-like 1 [Sus scrofa] gi|194040103|ref|XP_001929567.1| PREDICTED: guanine nucleotide-binding protein-like 1-like [Sus scrofa] gi|194040136|ref|XP_001927422.1| PREDICTED: guanine nucleotide-binding protein-like 1-like [Sus scrofa] gi|56805546|dbj|BAD83395.1| guanine nucleotide binding protein-like 1 [Sus scrofa] Length = 607 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK + S PG T++ +F+ P++ L D Sbjct: 363 IGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|197098580|ref|NP_001125827.1| guanine nucleotide-binding protein-like 1 [Pongo abelii] gi|332245888|ref|XP_003272083.1| PREDICTED: LOW QUALITY PROTEIN: guanine nucleotide-binding protein-like 1-like [Nomascus leucogenys] gi|75054997|sp|Q5RA07|GNL1_PONAB RecName: Full=Guanine nucleotide-binding protein-like 1 gi|55729338|emb|CAH91403.1| hypothetical protein [Pongo abelii] Length = 607 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 363 IGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|302808277|ref|XP_002985833.1| hypothetical protein SELMODRAFT_123195 [Selaginella moellendorffii] gi|300146340|gb|EFJ13010.1| hypothetical protein SELMODRAFT_123195 [Selaginella moellendorffii] Length = 492 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 7/64 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A GR NVGKS+L N +V R N+A + PG T+ + + ++ ++ L+ Sbjct: 10 PKVAIVGRPNVGKSALFNRIVGR-NMAIVHDEPGVTRD------RLYGRVRGSVQEFMLI 62 Query: 90 DMPG 93 D G Sbjct: 63 DTGG 66 >gi|253999419|ref|YP_003051482.1| GTP-binding protein EngA [Methylovorus sp. SIP3-4] gi|313201441|ref|YP_004040099.1| small GTP-binding protein [Methylovorus sp. MP688] gi|253986098|gb|ACT50955.1| small GTP-binding protein [Methylovorus sp. SIP3-4] gi|312440757|gb|ADQ84863.1| small GTP-binding protein [Methylovorus sp. MP688] Length = 523 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 28/136 (20%), Positives = 63/136 (46%), Gaps = 15/136 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAM 86 P++A GR NVGKS+L+N L+ ++ + + PG T+ H+ +L+ N Sbjct: 178 PKVAIVGRPNVGKSTLVNALLGQERVI-AFDQPGTTRDSIHI---------DLERNGKHY 227 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + ++ + +++ + L++D + G+ + D V +++ Sbjct: 228 TIIDTAGVRKRGKVFEAIEKFS--VIKTIQAIEEANVAILVVDAQEGITEQDAHVAAYIL 285 Query: 147 KKAVSYQIVLTKIDKL 162 + + + + K D L Sbjct: 286 EAGRALVVAINKWDGL 301 >gi|217032525|ref|ZP_03438016.1| hypothetical protein HPB128_180g24 [Helicobacter pylori B128] gi|298736539|ref|YP_003729065.1| GTP-binding protein [Helicobacter pylori B8] gi|216945803|gb|EEC24426.1| hypothetical protein HPB128_180g24 [Helicobacter pylori B128] gi|298355729|emb|CBI66601.1| GTP-binding protein [Helicobacter pylori B8] Length = 461 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 365 >gi|149182297|ref|ZP_01860776.1| tRNA modification GTPase [Bacillus sp. SG-1] gi|148849989|gb|EDL64160.1| tRNA modification GTPase [Bacillus sp. SG-1] Length = 461 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ +N A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 230 GRPNVGKSSLLNSLVH-ENKAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L + L+++ D+ +F KAV V Sbjct: 282 --RETEDIVERIGVERSRQVLKEADL--ILLVLNYSDEFTYEDEQLF-----KAVEGMDV 332 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + ++K + + +++ K L A V+ TS ++ +GI+ L +AI Sbjct: 333 IVIVNK-TDLPQKIDMDRVKEL-----AAEHAVVTTSLLEEQGIDELEEAI 377 >gi|15645453|ref|NP_207627.1| GTP-binding protein EngA [Helicobacter pylori 26695] gi|3915379|sp|O25505|DER_HELPY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|2313967|gb|AAD07883.1| GTP-binding protein homologue (yphC) [Helicobacter pylori 26695] Length = 458 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 198 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 250 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 251 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 307 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +VL K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 308 GIILVLNKWDIRYAPYEEIIATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 362 >gi|329770520|ref|ZP_08261898.1| GTP-binding protein Era [Gemella sanguinis M325] gi|328836269|gb|EGF85938.1| GTP-binding protein Era [Gemella sanguinis M325] Length = 302 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 21/173 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR N GKS+L+N ++ +K +A S+ P T+++ V D + + +D Sbjct: 11 VTIIGRPNAGKSTLLNNILKQK-IAIMSDKPQTTRNIINGVYTDSDS------QIVFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + + + S + VYL+I+ DQ + + + + V Sbjct: 64 PG---IHKPKHKLGDYMMKLASSAIQESEI--VYLIINASEKFGPGDQHLINIVKELKVP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVL 202 +++ KID ++P EK +I Y + E++P S++K ++ L Sbjct: 119 TFLLINKIDLITP-------EKLLEIITFYNELYDFVEIVPISALKSINVDNL 164 >gi|82704976|ref|XP_726776.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23482328|gb|EAA18341.1| unnamed protein product [Plasmodium yoelii yoelii] Length = 794 Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 9/62 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS+IN + K + S PG+T+H F + N L D Sbjct: 528 VGFIGFPNVGKSSIINSIFGEKKVG-VSRQPGKTKH--------FQTIPLNYYGFTLCDC 578 Query: 92 PG 93 PG Sbjct: 579 PG 580 >gi|315586500|gb|ADU40881.1| ribosome-associated GTPase EngA [Helicobacter pylori 35A] Length = 461 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKTRHIDEIKHKIIE 365 >gi|268610927|ref|ZP_06144654.1| small GTP-binding protein [Ruminococcus flavefaciens FD-1] Length = 399 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 18/132 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GR N GKSS++N V + L+ S+ G T V K L L + ++D Sbjct: 14 IGFFGRRNAGKSSVVN-AVTGQELSVVSDVKGTTTD---PVTKAMELLP--LGPVVIIDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE---RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG+ +V + G + VR + R+ L L++D G+ D+ + +K Sbjct: 68 PGF-------DDVGTLGEMRVRKTKQILNRTDL--AVLIVDNSTGLSDTDKQLIGIFKEK 118 Query: 149 AVSYQIVLTKID 160 + Y V K D Sbjct: 119 DIPYITVYNKSD 130 >gi|159900085|ref|YP_001546332.1| GTP-binding protein EngA [Herpetosiphon aurantiacus ATCC 23779] gi|238687093|sp|A9B567|DER_HERA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|159893124|gb|ABX06204.1| small GTP-binding protein [Herpetosiphon aurantiacus ATCC 23779] Length = 455 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 9/130 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKSSL+N LV + + SN PG T+ D +P + L+D Sbjct: 184 KIAIVGRPNVGKSSLLNKLVGEERVV-VSNIPGTTRD-----SIDTKLTYKGIP-ITLID 236 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ ++ + ++R + +L+D + G D V + + Sbjct: 237 TAGIRRRGSIEQGIERYS--VLRTMKAIERCHIALILVDAQEGPTAQDTHVAGMVLEANK 294 Query: 151 SYQIVLTKID 160 I++ K D Sbjct: 295 GLAIIVNKWD 304 >gi|73972065|ref|XP_848324.1| PREDICTED: similar to guanine nucleotide binding protein-like 1 isoform 2 [Canis familiaris] Length = 607 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK + S PG T++ +F+ P Sbjct: 357 KDGVVTIGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TP 405 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 406 SVKLCDCPG 414 >gi|322492680|emb|CBZ27957.1| GTP-binding protein-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 899 Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVD 90 + F G NVGKSSL+N + K + S PG T+H+ VP + L ++ P +AL Sbjct: 709 VGFIGHPNVGKSSLLNCIRGTK-VVSVSATPGHTKHMQTIPVPNEHLTLVDS-PGLAL-- 764 Query: 91 MPGYGYAR 98 P +G R Sbjct: 765 -PVFGVPR 771 >gi|309775502|ref|ZP_07670502.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium 3_1_53] gi|308916596|gb|EFP62336.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium 3_1_53] Length = 263 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 17/181 (9%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++N++ + SN G T+ + F K ++D G Sbjct: 8 GRPNVGKSSLVNAVLNQERVI-VSNIEGTTRDA---IDTPF---KREGKEYVVIDTAGIR 60 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++++ + L ERS + V ++ID G+++ D+ V + + IV Sbjct: 61 KRGKVYESIEKYSVLRAMSAIERSDV--VLVVIDGEKGIREQDKHVAGYAHEAGKGVIIV 118 Query: 156 LTKIDKLS-PTTAQETLEK---TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 K D + T+EK ++L +Y ++ S++K++ I + I E + Sbjct: 119 YNKWDTVEKDEQTMHTIEKEIRAQFLYLSYAP----ILFVSALKKQRIHTILPVIDEVHD 174 Query: 212 Y 212 Y Sbjct: 175 Y 175 >gi|302797579|ref|XP_002980550.1| hypothetical protein SELMODRAFT_112935 [Selaginella moellendorffii] gi|300151556|gb|EFJ18201.1| hypothetical protein SELMODRAFT_112935 [Selaginella moellendorffii] Length = 471 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 12/129 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM--A 87 P + GR NVGKSSL N LV+RK A + P + V +D L + Sbjct: 2 PSVIILGRPNVGKSSLYNRLVHRKE-AIVYDTP------DSHVTRDIREGSAKLSDLRFK 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 + D G + + GL +L T LID R GV +D++ + K Sbjct: 55 VFDSAGLETSEEGATVLARTTGLTATFL---RTCHAALFLIDGRAGVSPLDKEAVMWFRK 111 Query: 148 KAVSYQIVL 156 ++ +VL Sbjct: 112 LNLNLPVVL 120 >gi|149754685|ref|XP_001492056.1| PREDICTED: similar to guanine nucleotide binding protein-like 1 [Equus caballus] Length = 607 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK + S PG T++ +F+ P++ L D Sbjct: 363 IGCVGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|170744646|ref|YP_001773301.1| GTP-binding protein Era [Methylobacterium sp. 4-46] gi|168198920|gb|ACA20867.1| GTP-binding protein Era [Methylobacterium sp. 4-46] Length = 315 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 17/144 (11%) Query: 25 PKAGPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 P GP E +A G N GKS+L+N LV K ++ S T+ L + + + Sbjct: 13 PSGGPAETRAGFVALIGVPNAGKSTLLNSLVGSK-VSIVSRKVQTTRALVRGIAIEGAA- 70 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + VD PG APK+ +D ++ S + V LL+D R GV + Sbjct: 71 -----QIVFVDTPGI---FAPKRRLDR--AMVTSAWSGAADADAVCLLVDARKGVDPEVE 120 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLS 163 V L + +VL KID ++ Sbjct: 121 AVLGRLPELRRPKILVLNKIDVIA 144 >gi|94502128|ref|ZP_01308629.1| GTP-binding protein Era [Oceanobacter sp. RED65] gi|94425730|gb|EAT10737.1| GTP-binding protein Era [Oceanobacter sp. RED65] Length = 299 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 23/138 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 IA GR NVGKS+L+N ++ +K L+ TS P T+H +K A+ VD Sbjct: 9 IAIVGRPNVGKSTLLNNILGQK-LSITSRKPQTTRH-------QILGMKTTANVQAIYVD 60 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST-----LRCVYLLIDCRHGVKQIDQDVFSFL 145 PG + K + RY+++ +T + V LID + + DQ V + Sbjct: 61 TPGLHEGYSEKA--------LNRYINKVATTAINDVDLVVFLIDRTKWMPE-DQSVLEKI 111 Query: 146 DKKAVSYQIVLTKIDKLS 163 V +V+ K+D L+ Sbjct: 112 QASKVPCILVINKLDHLA 129 >gi|332519774|ref|ZP_08396238.1| ribosome-associated GTPase EngA [Lacinutrix algicola 5H-3-7-4] gi|332044333|gb|EGI80527.1| ribosome-associated GTPase EngA [Lacinutrix algicola 5H-3-7-4] Length = 435 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 17/132 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKN-LARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +A GR NVGKS+ N L+ R+ + + R +H + N +L+D Sbjct: 5 VAIVGRPNVGKSTFFNRLIQRREAIVDAVSGVTRDRH--------YGKSDWNGKEFSLID 56 Query: 91 MPGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 GY G + +D L + + ++D GV +D+DV L K Sbjct: 57 TGGYVKGSDDIFEAEIDKQVELAIEEAD------AIIFMVDVEAGVTGMDEDVARLLRKV 110 Query: 149 AVSYQIVLTKID 160 +V+ K+D Sbjct: 111 TKPVFLVVNKVD 122 >gi|325265154|ref|ZP_08131880.1| GTP-binding protein [Clostridium sp. D5] gi|324029558|gb|EGB90847.1| GTP-binding protein [Clostridium sp. D5] Length = 406 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 29/187 (15%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + I GR N GKSS+IN + +NLA S+ G T V K L L Sbjct: 7 PSSDRVHIGIFGRRNAGKSSIINAITG-QNLAIVSDIKGTTTDP---VLKAMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + ++D PG +D G L I + + L+ID G+ + D Sbjct: 61 PVVIIDTPG----------LDDTGELGKLRIQKAYQILNKTDIAVLVIDSTAGMTEADAG 110 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVKRKGI 199 + + KK + + IVL K D + A ++ N P + +I S+V + I Sbjct: 111 ILDRIMKKQIPFVIVLNKSDIAGTSNAASSV--------NMPDVPSDNIIAVSTVTGENI 162 Query: 200 EVLRKAI 206 L++ I Sbjct: 163 HELKELI 169 >gi|284049406|ref|YP_003399745.1| GTP-binding protein HSR1-related protein [Acidaminococcus fermentans DSM 20731] gi|283953627|gb|ADB48430.1| GTP-binding protein HSR1-related protein [Acidaminococcus fermentans DSM 20731] Length = 352 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 28/183 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I G+ GKSSLIN L ++ +AR S A T+ P + VD Sbjct: 25 KICLFGQPGAGKSSLINELAGQR-VARVSQATDTTREAQIV----------ECPDVIYVD 73 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGY + P+ Y S + L+ L + Q D D F + + Sbjct: 74 LPGYDTSLFPENA----------YFSTFNPLQYDLFLCVFAGKLHQADVDFFGKIARTGR 123 Query: 151 SYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR------KGIEVLR 203 V K D L P+ ++E LE ++ E + +S +R +GI L Sbjct: 124 VCLFVRNKCDGLYDPSCSREELEAKIRRDLHHQVGPRETLVFTSCRRNRPAGERGIPELE 183 Query: 204 KAI 206 +A+ Sbjct: 184 RAM 186 >gi|239618466|ref|YP_002941788.1| GTP-binding protein Era [Kosmotoga olearia TBF 19.5.1] gi|239507297|gb|ACR80784.1| GTP-binding protein Era [Kosmotoga olearia TBF 19.5.1] Length = 305 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 19/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ G+ NVGKSSL+N LV K + + V + + D Sbjct: 12 VSLVGKPNVGKSSLVNQLVGEKVAIVSDKVQTTRNRIGGIVTTERGQV-------IFYDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG K + GG +V+ +S + + ++D G+K+ D V ++ + Sbjct: 65 PGI------HKPLHKLGGYLVKITVSALNGSDLIAAILDISDGIKKSDFLVAKHVNSSNI 118 Query: 151 SYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ KID + + E LE+ L +N + P S++ +GI+ +A++E Sbjct: 119 PVFLVINKIDVVKTRKKITEFLEEGTKLFKNV----EKTFPVSAITGEGIKEFLEAVIE 173 >gi|223937585|ref|ZP_03629488.1| small GTP-binding protein [bacterium Ellin514] gi|223893748|gb|EEF60206.1| small GTP-binding protein [bacterium Ellin514] Length = 519 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 15/165 (9%) Query: 15 LRGVPEIGLLPKA---GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HL 68 G PE+ K+ GP ++A GR NVGKSS+IN L + + S PG T+ + Sbjct: 183 FEGTPEVEGKTKSELKGPLKLAIVGRPNVGKSSIINALTQSERVI-VSPIPGTTRDAVDV 241 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 F V D ++ + L+D G +R +V+ + R+ + CV L++ Sbjct: 242 PFEVEAD--GIRQ---SYLLIDTAGLRKSRRVDDSVEFYSVKRTEDSIARADI-CV-LVL 294 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 D G+ + D+ V + ++ + +V+ K D L + +E+ E+ Sbjct: 295 DAEAGITEQDKKVADKIVEERRACIVVVNKWD-LVEESVRESREQ 338 >gi|149183640|ref|ZP_01862057.1| ribosomal biogenesis GTPase [Bacillus sp. SG-1] gi|148848657|gb|EDL62890.1| ribosomal biogenesis GTPase [Bacillus sp. SG-1] Length = 287 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 14/73 (19%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLK 80 G+ P+A I G NVGKS+LIN L +KN+A+T N PG T+ + V K+ Sbjct: 115 GMKPRAIRAMIV--GIPNVGKSTLINRLA-KKNIAKTGNTPGVTKAQQWIKVGKE----- 166 Query: 81 NNLPAMALVDMPG 93 M L+D PG Sbjct: 167 -----MELLDTPG 174 >gi|70953382|ref|XP_745796.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56526229|emb|CAH74786.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 763 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 9/62 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F G NVGKSS+IN +V K + S PG+T+H F + N L D Sbjct: 521 VGFIGFPNVGKSSVINSIVGEKKVG-VSRQPGKTKH--------FQTISLNHYNFTLCDC 571 Query: 92 PG 93 PG Sbjct: 572 PG 573 >gi|326572024|gb|EGE22026.1| GTP-binding protein Era [Moraxella catarrhalis BC8] Length = 331 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 36/187 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K L+ TS P T+H + L + + VD Sbjct: 34 VAIVGRPNVGKSTLMNHMLGQK-LSITSRKPQTTRHRIHGI------LTDEDRQIVFVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER------STLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG G VR ++ER S L V +++ G++ + D+ + Sbjct: 87 PGI-------------HGKEVRAINERMNKAAISALADVDVVLFVVDGIQWREDDLLTLE 133 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL--IRNYPTA--HPEVIPTSSVKRKGIEV 201 A + ++L I+K A +K+K L I ++ + ++IP S+++R ++ Sbjct: 134 KLSATNLPVILV-INK-----ADTVKDKSKLLPVIESFSESFDFADIIPVSALRRHNLDR 187 Query: 202 LRKAILE 208 L+ I E Sbjct: 188 LQSVIGE 194 >gi|311269813|ref|XP_001925896.2| PREDICTED: large subunit GTPase 1 homolog [Sus scrofa] Length = 513 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 377 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 426 Query: 86 MALVDMPG 93 + L D PG Sbjct: 427 LCLCDCPG 434 >gi|302806046|ref|XP_002984773.1| hypothetical protein SELMODRAFT_121150 [Selaginella moellendorffii] gi|300147359|gb|EFJ14023.1| hypothetical protein SELMODRAFT_121150 [Selaginella moellendorffii] Length = 490 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 7/64 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A GR NVGKS+L N +V R N+A + PG T+ + + ++ ++ L+ Sbjct: 8 PKVAIVGRPNVGKSALFNRIVGR-NMAIVHDEPGVTRD------RLYGRVRGSVQEFMLI 60 Query: 90 DMPG 93 D G Sbjct: 61 DTGG 64 >gi|288556077|ref|YP_003428012.1| GTP-binding protein Der [Bacillus pseudofirmus OF4] gi|288547237|gb|ADC51120.1| GTP-binding protein EngA [Bacillus pseudofirmus OF4] Length = 437 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 11/149 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ GR NVGKSSL+N ++ + + SN PG T+ + F+ + L+D Sbjct: 178 ISLIGRPNVGKSSLVNAMLGEERVI-VSNIPGTTRDA---IDTSFTRDGQD---YVLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ + + ++R L V ++I+ G+ + D+ + + + + Sbjct: 231 AGMRKRGKVYESTEKYS--VLRSLKAIERSNVVLVVINAEEGIIEQDKKIAGYAHEAGRA 288 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 IV+ K D + +T++K + IR+ Sbjct: 289 VIIVVNKWDAIE--RDDKTMQKFEQKIRD 315 >gi|326204998|ref|ZP_08194849.1| ribosome-associated GTPase EngA [Clostridium papyrosolvens DSM 2782] gi|325984864|gb|EGD45709.1| ribosome-associated GTPase EngA [Clostridium papyrosolvens DSM 2782] Length = 441 Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 13/149 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 ++A G+ N GKSSLIN ++ +N SN PG T+ ++ V D + Sbjct: 179 KVAVVGKPNAGKSSLINSILG-ENRVIVSNIPGTTRDAIDTHVEMDGQKY-------TFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + ++ + + ER+ + C+ ++ID GV + D + + ++ Sbjct: 231 DTAGIRKRSKINETIEKYSTIRSWTAIERADV-CL-IMIDAEDGVTEQDTKIAGYAHQQG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + IV+ K D + T TLE+ + ++ Sbjct: 289 KASIIVVNKWDLIEKQTG--TLEEYRKVV 315 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 29/142 (20%), Positives = 60/142 (42%), Gaps = 23/142 (16%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+ N L + ++ + PG T+ + ++ ++ Sbjct: 2 GKPVVAVVGRPNVGKSTFFNYLAGSR-ISIVEDTPGVTRD------RIYTEIEWRSTKFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSER------STLRCVYLLIDCRHGVKQIDQDV 141 L+D G ++ + I+ +R T + ++D + G+ D++V Sbjct: 55 LIDTGG----------IEPYSEDIIMQQMKRQAEIAIETADVIVFMVDGKDGMTATDKEV 104 Query: 142 FSFLDKKAVSYQIVLTKIDKLS 163 + L K + + K+D++ Sbjct: 105 ATMLRKSQKPVVLCVNKVDRIG 126 >gi|261837935|gb|ACX97701.1| GTP-binding protein [Helicobacter pylori 51] Length = 461 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMAALKRKFRFLEYAP----VITTSCLKTRHIDEIKHKIIE 365 >gi|260591202|ref|ZP_05856660.1| ribosome-associated GTPase EngA [Prevotella veroralis F0319] gi|260537067|gb|EEX19684.1| ribosome-associated GTPase EngA [Prevotella veroralis F0319] Length = 437 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS+IN + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTKFGF--DFY------- 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++F Sbjct: 227 ---LVDTAGIRRKNKVTEDLEFYS--VMRSIRSIENADVCILMLDATRGIESQDMNIFQL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEV 201 + + S +V+ K D L P Q+ ++ IR+ P + ++ K++ +V Sbjct: 282 IQRNNKSLVVVVNKWD-LVPDKNQKVIDTFVNAIRSRMAPFVDFPIIFASALTKQRIFKV 340 Query: 202 LRKA 205 L A Sbjct: 341 LETA 344 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 17/132 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A S+ G T+ + + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRH-AIVSDTAGTTRD------RQYGKCQWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLI---VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G+ K+ D + I V +E + L V L+D GV D+DV L + Sbjct: 58 GGWVV-----KSDDVFEDAIRKQVLVATEEADL--VLFLVDTETGVTDWDEDVAMILRRT 110 Query: 149 AVSYQIVLTKID 160 + +V K+D Sbjct: 111 KLPVLLVANKVD 122 >gi|251781814|ref|YP_002996116.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390443|dbj|BAH80902.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126626|gb|ADX23923.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 436 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 13/142 (9%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + S G T+ + F++ ++ Sbjct: 175 IRFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDADGQ--EFTMI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +N + + ++R + V ++I+ G+++ D+ + F + Sbjct: 229 DTAGMRKSGKIYENTEKYS--VMRAMRAIDRSDVVLMVINAEEGIREYDKRIAGFAHEAG 286 Query: 150 VSYQIVLTK---IDKLSPTTAQ 168 IV+ K IDK + T AQ Sbjct: 287 KGMIIVVNKWDTIDKDNHTVAQ 308 >gi|326560590|gb|EGE10971.1| GTP-binding protein Era [Moraxella catarrhalis 103P14B1] gi|326573971|gb|EGE23921.1| GTP-binding protein Era [Moraxella catarrhalis O35E] gi|326574963|gb|EGE24893.1| GTP-binding protein Era [Moraxella catarrhalis 101P30B1] Length = 331 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 36/187 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K L+ TS P T+H + L + + VD Sbjct: 34 VAIVGRPNVGKSTLMNHMLGQK-LSITSRKPQTTRHRIHGI------LTDEDRQIVFVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER------STLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG VR ++ER S L V +++ G++ + D+ + L Sbjct: 87 PGIHSKE-------------VRAINERMNKAAISALADVDVVLFVVDGIQWREDDLLT-L 132 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL--IRNYPTA--HPEVIPTSSVKRKGIEV 201 +K +V+ V+ I+K A +K+K L I ++ + ++IP S+++R ++ Sbjct: 133 EKLSVTNLPVILVINK-----ADTVKDKSKLLPVIESFSESFDFADIIPVSALRRHNLDR 187 Query: 202 LRKAILE 208 L+ I E Sbjct: 188 LQSVIGE 194 >gi|325926993|ref|ZP_08188268.1| GTP-binding protein Era [Xanthomonas perforans 91-118] gi|325542652|gb|EGD14119.1| GTP-binding protein Era [Xanthomonas perforans 91-118] Length = 285 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 24/179 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALVDMPG 93 GR NVGKS+L N LV K ++ SN P T+H + P + LVD PG Sbjct: 3 GRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIA--------TFPEGQLVLVDTPG 53 Query: 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF--LDKKAVS 151 R K+ ++ V + R +L V + + ++D +F L V Sbjct: 54 L--HREQKRAMNR-----VMNRAARGSLEGVDAAVLVIEAGRWDEEDTLAFRVLSDAGVP 106 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D+L TA R + HP S++KRKG++ L +L+ + Sbjct: 107 VVLVVNKVDRLKDKTALFPFLAQVSEGRTFAAVHP----VSALKRKGLDALVGDLLKLV 161 >gi|317012645|gb|ADU83253.1| GTP-binding protein EngA [Helicobacter pylori Lithuania75] Length = 461 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + V L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--VLLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKACHIDEIKHKIIE 365 >gi|308062155|gb|ADO04043.1| GTP-binding protein EngA [Helicobacter pylori Cuz20] Length = 461 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 365 >gi|229815234|ref|ZP_04445570.1| hypothetical protein COLINT_02280 [Collinsella intestinalis DSM 13280] gi|229809244|gb|EEP45010.1| hypothetical protein COLINT_02280 [Collinsella intestinalis DSM 13280] Length = 340 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 12/147 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKS+L+N K + A + L V ++ L +VD Sbjct: 50 VALVGRPNAGKSTLLNACYGEKVAITSPVAQTTRRRLRAVVNREDCQL-------VIVDT 102 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + S L L E S + + +ID + + D V + Sbjct: 103 PGI---HKPKDGLGSE--LNKSALGELSDVDVIAFVIDASAPIGRGDAWVAERVAAAKAP 157 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLI 178 +VLTK D SP + LE + L+ Sbjct: 158 KVLVLTKADLASPEEMLKQLEAARALV 184 >gi|94501121|ref|ZP_01307644.1| predicted GTPase [Oceanobacter sp. RED65] gi|94426697|gb|EAT11682.1| predicted GTPase [Oceanobacter sp. RED65] Length = 482 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 9/132 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I+ GR NVGKS+L+N ++ + + PG T + +P + +N P L+D Sbjct: 184 ISVVGRPNVGKSTLVNRMLGEDRVV-VYDHPGTTMD-SIEIPYE----RNEKP-YTLIDT 236 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + K+ + + IV+ L ++ID R G+ + D + SF+ Sbjct: 237 AGVRRRKNIKEAAEKFS--IVKALQAIQDANVCIVVIDAREGIVEQDLTMLSFVLNSGKG 294 Query: 152 YQIVLTKIDKLS 163 I L K D + Sbjct: 295 LVIALNKWDGMD 306 >gi|321253187|ref|XP_003192658.1| GTP-binding protein [Cryptococcus gattii WM276] gi|317459127|gb|ADV20871.1| GTP-binding protein, putative [Cryptococcus gattii WM276] Length = 735 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Query: 13 IFLRGVPEIGLLPKAGPPE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +F+ P++ + P + G NVGKSS IN L+ K ++ S+ PG+T+H Sbjct: 372 LFINAAPDLKDFATSQHPNPKLMVGLVGYPNVGKSSTINSLLGAKKVS-VSSTPGKTKHF 430 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPG 93 V D + L D PG Sbjct: 431 QTLVLSD---------TITLCDCPG 446 >gi|317178805|dbj|BAJ56593.1| GTP-binding protein EngA [Helicobacter pylori F30] Length = 461 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTTTD-----PIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKVRHIDEIKHKIIE 365 >gi|317177334|dbj|BAJ55123.1| GTP-binding protein EngA [Helicobacter pylori F16] Length = 461 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSMAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 365 >gi|294939460|ref|XP_002782481.1| GTP-binding protein ERG, putative [Perkinsus marinus ATCC 50983] gi|239894087|gb|EER14276.1| GTP-binding protein ERG, putative [Perkinsus marinus ATCC 50983] Length = 598 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 7/76 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF--FVPKDFSNLKNNLPAMALV 89 I G NVGKS++IN L K ++ S PG+T+HL V +DF + L Sbjct: 305 IGMVGFPNVGKSTVINALWGAKKVS-MSRQPGKTKHLQTLELVTEDFGGGNK----IQLC 359 Query: 90 DMPGYGYARAPKKNVD 105 D PG + A + D Sbjct: 360 DCPGLVFPTAVRSKAD 375 >gi|331248780|ref|XP_003337012.1| translation initiation factor IF-2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309316002|gb|EFP92593.1| translation initiation factor IF-2 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 901 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 11/137 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP + G + GK++L++ L RK+ S A G TQH+ F +L A A Sbjct: 318 PPVVCIMGHVDHGKTTLLDAL--RKSAVAASEAGGITQHIGAF-EVSLKDLMAAGSANAD 374 Query: 89 VDMPGYGYARAPK--KNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G G P+ +D+ G + R T L++ GVK ++V Sbjct: 375 ADPAGEG----PQTITFLDTPGHAAFSAMRSRGAMTTDVAVLVVAADDGVKPQTKEVIEL 430 Query: 145 LDKKAVSYQIVLTKIDK 161 + + + + +TK DK Sbjct: 431 VRQTDIGVVVAITKCDK 447 >gi|296115042|ref|ZP_06833684.1| GTP-binding protein Era [Gluconacetobacter hansenii ATCC 23769] gi|295978379|gb|EFG85115.1| GTP-binding protein Era [Gluconacetobacter hansenii ATCC 23769] Length = 302 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 17/142 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N + K S + Q F V L N M LVD Sbjct: 14 VAIVGAPNAGKSTLLNRMAGTK----LSIVSPKAQTTRFRV---LGILMRNHAQMLLVDT 66 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P++ +D ++ + L+ID R G+ + +++ S L ++ Sbjct: 67 PGIFR---PRRMLDR--AMVAAAWTGAEDADITLLIIDARAGLTEAVREIVSQLAQRNRR 121 Query: 152 YQIVLTKI-----DKLSPTTAQ 168 +VL K D L P TA+ Sbjct: 122 VWLVLNKTDLMRRDALLPLTAE 143 >gi|229577161|ref|NP_001153316.1| large subunit GTPase 1 homolog [Acyrthosiphon pisum] Length = 597 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 14/64 (21%) Query: 32 IAFSGRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALV 89 I G NVGKSS IN +LVN+K S+ PG+T+H FV K+ + L Sbjct: 335 IGLVGYPNVGKSSTINTLLVNKK--VSVSSTPGKTKHFQTLFVDKE----------LMLC 382 Query: 90 DMPG 93 D PG Sbjct: 383 DCPG 386 >gi|156100801|ref|XP_001616094.1| translation initiation factor IF-2 [Plasmodium vivax SaI-1] gi|148804968|gb|EDL46367.1| translation initiation factor IF-2, putative [Plasmodium vivax] Length = 1006 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 29/143 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKDF---------SNLKN 81 + G + GK+ L++ L R + + A G TQ + F PKD ++K Sbjct: 425 VCILGHVDTGKTKLLDKL--RHTNVQDNEAGGITQQIGATFFPKDILDKQIKKVDESIKC 482 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQ 139 + ++D PG+ +S+ L +R + C L+ID HG++Q + Sbjct: 483 MSKGIMIIDTPGH----------ESF-----YNLRKRGSSLCDIAILVIDLMHGLEQQTK 527 Query: 140 DVFSFLDKKAVSYQIVLTKIDKL 162 + L ++ + I L KID+L Sbjct: 528 ESIQILKQRNCPFVIALNKIDRL 550 >gi|145641303|ref|ZP_01796883.1| GTP-binding protein [Haemophilus influenzae R3021] gi|145274140|gb|EDK14006.1| GTP-binding protein [Haemophilus influenzae 22.4-21] Length = 105 Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 30/54 (55%) Query: 113 RYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 YL +R L + +L+D RH +K +DQ + + + ++LTK DKLS + Sbjct: 3 EYLQKRECLAGLVVLMDIRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSV 56 >gi|322411159|gb|EFY02067.1| GTP-binding protein EngA [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 436 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 13/142 (9%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + S G T+ + F++ ++ Sbjct: 175 IRFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDADGQ--EFTMI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +N + + + +RS + V ++I+ G+++ D+ + F + Sbjct: 229 DTAGMRKSGKIYENTEKYSVMRAMRAIDRSDV--VLMVINAEEGIREYDKRIAGFAHEAG 286 Query: 150 VSYQIVLTK---IDKLSPTTAQ 168 IV+ K IDK + T AQ Sbjct: 287 KGMIIVVNKWDTIDKDNHTVAQ 308 >gi|317404054|gb|EFV84511.1| hypothetical protein HMPREF0005_03481 [Achromobacter xylosoxidans C54] Length = 369 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 28/149 (18%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 AG I +G++ VGKS+LIN V R LA+T TQ ++FS + L Sbjct: 26 AGRVNILVAGKTGVGKSTLINA-VFRGELAKTGAGKPVTQ-----TTQEFSRPGHPL--- 76 Query: 87 ALVDMPGY---GYARAPKKNVDSWGGLIVRYLSERST-------LRCVYLLI-DCRHGVK 135 ++D G YAR+ ++ D + ERS L +L I D H V+ Sbjct: 77 TIIDTRGLEVGDYARSRQQLAD--------LIRERSAADDQDRHLHAAWLCIQDSGHRVE 128 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 + ++ + L + +VLTK K SP Sbjct: 129 DAEIELSALLADAGIPVIVVLTKARKNSP 157 >gi|313890874|ref|ZP_07824498.1| ribosome biogenesis GTPase Der [Streptococcus pseudoporcinus SPIN 20026] gi|313120772|gb|EFR43887.1| ribosome biogenesis GTPase Der [Streptococcus pseudoporcinus SPIN 20026] Length = 436 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 10/134 (7%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + S G T+ D S ++ ++ Sbjct: 175 IRFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRD-----AIDTSFTDSDGQEFTMI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +N + + + +RS + V ++I+ G+++ D+ + F + Sbjct: 229 DTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVINAEEGIREYDKRIAGFAHEAG 286 Query: 150 VSYQIVLTKIDKLS 163 IV+ K D +S Sbjct: 287 KGMIIVVNKWDTIS 300 >gi|242373782|ref|ZP_04819356.1| GTP-binding protein EngA [Staphylococcus epidermidis M23864:W1] gi|242348519|gb|EES40121.1| GTP-binding protein EngA [Staphylococcus epidermidis M23864:W1] Length = 436 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 11/145 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ V +++ + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEERVI-VSNVAGTTRDA---VDTEYTYEDQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS + V ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERSNV--VLVVIDAEQGIIEQDKRVAGYAHEEGKAIVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRN 180 + K D + + +T++K +RN Sbjct: 293 VNKWDTVEKDS--KTMKKFTEDVRN 315 >gi|167759231|ref|ZP_02431358.1| hypothetical protein CLOSCI_01578 [Clostridium scindens ATCC 35704] gi|167663105|gb|EDS07235.1| hypothetical protein CLOSCI_01578 [Clostridium scindens ATCC 35704] Length = 298 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 21/183 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ V L + VD Sbjct: 10 VTLIGRPNVGKSTLMNYLIGQK-IAITSNKPQTTRNRIQTV------LTTEEGQIVFVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + G +V ++ER+ + V L++ + ++ + L K + Sbjct: 63 PGIHKAK------NKLGEYMVN-VAERTLNEVDVVLWLVEPTTFIGAGEKHIAEQLKKVS 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KID + +E L Y A E++P S+ E L KA+++ Sbjct: 116 TPVILVINKIDSVK---KEEILPAIATYKDIYDFA--EIVPVSARNGNNTEELLKAVMKY 170 Query: 210 INY 212 + Y Sbjct: 171 LPY 173 >gi|167630055|ref|YP_001680554.1| GTP-binding protein [Heliobacterium modesticaldum Ice1] gi|238687893|sp|B0TFW3|DER_HELMI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|167592795|gb|ABZ84543.1| GTP-binding protein [Heliobacterium modesticaldum Ice1] Length = 442 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 11/131 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 +IA GR NVGKSSL+N ++ ++ + S+ PG T+ ++ +D L+ Sbjct: 179 KIAVIGRPNVGKSSLVNAILGQERVI-VSDIPGTTRDAIDTAFDRDGKR-------YILI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + ++R L V ++ID GV + D+ + + + Sbjct: 231 DTAGMRRKGRIEEAVERYS--VMRSLRAIDRSDVVLMVIDASQGVTEQDKKIAGYAHEAG 288 Query: 150 VSYQIVLTKID 160 + +VL K D Sbjct: 289 KACVLVLNKWD 299 >gi|51246791|ref|YP_066675.1| GTP-binding protein (EngA) [Desulfotalea psychrophila LSv54] gi|50877828|emb|CAG37668.1| Probable GTP-binding protein (EngA) [Desulfotalea psychrophila LSv54] Length = 446 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 21/136 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + +N A PG T+ + + + N AM LV Sbjct: 7 PIVALVGRPNVGKSTLFNRITKSRN-ALVDPTPGVTRD------RQYERVVWNNRAMILV 59 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G D+ ++V ++ +++ V L+D R G+ D +V Sbjct: 60 DTGGID---------DNPEDVLVPHIRDQALAAIEEADIVLFLMDGREGLTPADYEVVDI 110 Query: 145 LDKKAVSYQIVLTKID 160 L + V+ KID Sbjct: 111 LRRAKKPVYHVINKID 126 >gi|148691323|gb|EDL23270.1| guanine nucleotide binding protein, related sequence 1, isoform CRA_c [Mus musculus] Length = 421 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK + S PG T++ +F+ P++ L D Sbjct: 177 IGCIGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TPSVKLCD 225 Query: 91 MPG 93 PG Sbjct: 226 CPG 228 >gi|116670027|ref|YP_830960.1| small GTP-binding protein [Arthrobacter sp. FB24] gi|116610136|gb|ABK02860.1| small GTP-binding protein [Arthrobacter sp. FB24] Length = 522 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 41/192 (21%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A +G +N GKSSL+N L + L NA F+ L + Sbjct: 301 PSVAIAGYTNAGKSSLLNRLTDAGVL--VENAL-------------FATLDPTVRKAETA 345 Query: 90 DMPGY------GYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH----GVKQID 138 D GY G+ R+ P + V+++ L E + + ++D H G Sbjct: 346 DGLGYTLADTVGFVRSLPTQLVEAFRS----TLEEVADSDLILHVVDVSHPDPEGQIAAV 401 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + VFS +D + V IVL K D P +++ P + S+ +G Sbjct: 402 RAVFSEVDARKVPEIIVLNKADAADP-----------FVVERLKQREPRHVVVSARTGQG 450 Query: 199 IEVLRKAILETI 210 I L KAI E+I Sbjct: 451 IAELLKAISESI 462 >gi|311934|emb|CAA46160.1| GTP-binding protein MMR1 [Mus musculus] Length = 430 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK + S PG T++ +F+ P Sbjct: 180 KDGVVTIGCIGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TP 228 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 229 SVKLCDCPG 237 >gi|254779193|ref|YP_003057298.1| GTP-binding protein EngA [Helicobacter pylori B38] gi|254001104|emb|CAX29059.1| Putative GTP-binding protein, EngA family [Helicobacter pylori B38] Length = 461 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSMAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 365 >gi|253997708|ref|YP_003049772.1| tRNA modification GTPase TrmE [Methylotenera mobilis JLW8] gi|253984387|gb|ACT49245.1| tRNA modification GTPase TrmE [Methylotenera mobilis JLW8] Length = 449 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 12/117 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G+ NVGKSSL+N L + +A + G T+ K+ + N +P + ++D Sbjct: 221 VVLVGQPNVGKSSLMNQLAGEE-VAIVTAIAGTTRD----TIKNAIQI-NGVP-LHVIDT 273 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G R V+ +G I R T LL+D HG+ ++++ + + L +K Sbjct: 274 AGL---RETDDEVEKFG--IARTWRATETAHIALLLVDATHGITEVEKSILARLPQK 325 >gi|195013303|ref|XP_001983830.1| GH15356 [Drosophila grimshawi] gi|193897312|gb|EDV96178.1| GH15356 [Drosophila grimshawi] Length = 1150 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 27/139 (19%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFSNLKNNL 83 G + GK+ +++ L R+ + S A G TQ + VP K+ ++ ++ L Sbjct: 568 GHVDTGKTKILDKL--RRTNVQDSEAGGITQQIGATNVPIEAIKEQTKFVKNGTSFEHRL 625 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + ++D PG+ +S+ L R S L++D HG++ + Sbjct: 626 PGLLIIDTPGH----------ESFSNLRNRG---SSLCDIAILVVDIMHGLEPQTLESIQ 672 Query: 144 FLDKKAVSYQIVLTKIDKL 162 L KK + + L KID+L Sbjct: 673 LLKKKRCPFIVALNKIDRL 691 >gi|122937361|ref|NP_032162.2| guanine nucleotide-binding protein-like 1 [Mus musculus] Length = 607 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK + S PG T++ +F+ P++ L D Sbjct: 363 IGCIGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|330996163|ref|ZP_08320053.1| hydrogenase maturation GTPase HydF [Paraprevotella xylaniphila YIT 11841] gi|329573667|gb|EGG55258.1| hydrogenase maturation GTPase HydF [Paraprevotella xylaniphila YIT 11841] Length = 399 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 12/73 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL---NFFVPKDFSNLKN 81 P+A I GR N GKSSL+N+L ++ +A S+ PG T + N +P Sbjct: 7 PRANRFHIGLFGRRNSGKSSLVNMLTGQE-VAVVSDVPGTTTDVILKNIELP-------- 57 Query: 82 NLPAMALVDMPGY 94 + A LVD GY Sbjct: 58 GIGASVLVDTAGY 70 >gi|331265908|ref|YP_004325538.1| phosphoglycerate dehydrogenase, GTP-binding protein [Streptococcus oralis Uo5] gi|326682580|emb|CBZ00197.1| phosphoglycerate dehydrogenase, GTP-binding protein [Streptococcus oralis Uo5] Length = 436 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 19/160 (11%) Query: 24 LPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 + + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 167 VEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDG 222 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 ++D G + +N + + + +RS + V ++++ G+++ D+ + Sbjct: 223 Q--EFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRI 278 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++ + Sbjct: 279 AGFAHEAGKGMIIVVNKWD---------TLEKDNHTMKKW 309 >gi|317009155|gb|ADU79735.1| GTP-binding protein EngA [Helicobacter pylori India7] Length = 462 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 202 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 254 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 255 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 311 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 312 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 366 >gi|306824736|ref|ZP_07458080.1| ribosome-associated GTPase EngA [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432947|gb|EFM35919.1| ribosome-associated GTPase EngA [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 436 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 19/160 (11%) Query: 24 LPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 + + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 167 VEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDG 222 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 ++D G + +N + + + +RS + V ++++ G+++ D+ + Sbjct: 223 Q--EFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRI 278 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++ + Sbjct: 279 AGFAHEAGKGMIIVVNKWD---------TLEKDNHTMKKW 309 >gi|209884976|ref|YP_002288833.1| GTP-binding protein Era [Oligotropha carboxidovorans OM5] gi|226741225|sp|B6JGG2|ERA_OLICO RecName: Full=GTPase Era gi|209873172|gb|ACI92968.1| GTP-binding protein Era [Oligotropha carboxidovorans OM5] Length = 308 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 29/181 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V + + + LVD Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVVEGNAQI-------VLVDT 70 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG PK+ +D +W G + + + CV L+D R G+ + + +F+ L Sbjct: 71 PGIF---TPKRRLDRAMVSTAWSG------AHDADMVCV--LLDARAGLDEEAEAIFTKL 119 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V+ KID ++ ++ N A E +++ G++ LR+A Sbjct: 120 EAVKHPKFLVINKIDLVAREKLLALAQRA-----NERIAFRETFMVAALSGDGVDDLRRA 174 Query: 206 I 206 + Sbjct: 175 L 175 >gi|167376130|ref|XP_001733874.1| eukaryotic translation initiation factor 5B [Entamoeba dispar SAW760] gi|165904893|gb|EDR30026.1| eukaryotic translation initiation factor 5B, putative [Entamoeba dispar SAW760] Length = 890 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 31/151 (20%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL-NFFVP---------- 73 PK P G + GK+ +++ + R N+ R A G TQ + + F P Sbjct: 296 PKYRSPICCVLGHVDTGKTKILDRM-RRTNVQR-GEAGGITQQIGSTFFPLDSIEKMTEK 353 Query: 74 -KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDC 130 KD + LK +P + ++D PG+ L R T C L++D Sbjct: 354 MKDKTKLKFKIPGLLVMDTPGHEA---------------FNNLRSRGTSLCDIAVLVVDL 398 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 HG++ + + L +K + + L KID+ Sbjct: 399 MHGLEPQTIESINLLKQKNTPFVVALNKIDR 429 >gi|189425185|ref|YP_001952362.1| GTP-binding protein EngA [Geobacter lovleyi SZ] gi|238692111|sp|B3E421|DER_GEOLS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189421444|gb|ACD95842.1| small GTP-binding protein [Geobacter lovleyi SZ] Length = 449 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 25/136 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N +V + A + PG T+ N+ V + + LVD Sbjct: 5 VAIVGRPNVGKSTLFNRIVGERR-AIVDDMPGVTRDRNYAVVERYDK------PFILVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSFLD 146 G+ + +++ + E+S L + L+D + G+ D +V S L Sbjct: 58 GGFEPVTEDR---------MLQQMREQSLLAMEEADVILFLMDAKQGLTPADNEVASMLR 108 Query: 147 K--KAVSYQIVLTKID 160 + K V Y V+ K+D Sbjct: 109 RVDKPVFY--VVNKVD 122 >gi|91202839|emb|CAJ72478.1| similar to universal bacterial GTPase ThdF/TrmE [Candidatus Kuenenia stuttgartiensis] Length = 468 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 7/65 (10%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSLIN L+ K A S+ PG T+ + V L+ L D+ G+ Sbjct: 237 GKPNVGKSSLINALLGEKR-AIVSDRPGTTRDMVTGV------LEIGSVCFKLTDIAGFD 289 Query: 96 YARAP 100 AR P Sbjct: 290 EAREP 294 >gi|158518400|sp|P36916|GNL1_MOUSE RecName: Full=Guanine nucleotide-binding protein-like 1; AltName: Full=GTP-binding protein MMR1 gi|16307502|gb|AAH10298.1| Guanine nucleotide binding protein-like 1 [Mus musculus] Length = 607 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN LV RK ++ S PG T++ +F+ P++ L D Sbjct: 363 IGCIGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TPSVKLCD 411 Query: 91 MPG 93 PG Sbjct: 412 CPG 414 >gi|77919228|ref|YP_357043.1| GTPases [Pelobacter carbinolicus DSM 2380] gi|77545311|gb|ABA88873.1| iron-only hydrogenase maturation protein HydF [Pelobacter carbinolicus DSM 2380] Length = 416 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 24/187 (12%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK I GR NVGKSSL+N L R+N++ SN G T V K L + Sbjct: 5 PKGMRLHIGLFGRRNVGKSSLLNAL-TRQNVSIVSNVAGTTTDA---VEKPMEMLP--IG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +D G +V + G + V+ + + L++ + + + Sbjct: 59 PVLFIDTAGI-------DDVGALGEMRVQKTRQVFDRTDIGLIVAEAGRWDDFEDAILAE 111 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ-ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L ++ + +V K D P T E+L + ++ P + T++ K +GI LR Sbjct: 112 LQQRQIPVVVVFNKTDIAQPDTGHLESLSQ-----KDVPC-----VATAAEKGEGIIELR 161 Query: 204 KAILETI 210 ++++ T+ Sbjct: 162 ESLIRTV 168 >gi|45359278|ref|NP_988835.1| small GTP-binding protein [Methanococcus maripaludis S2] gi|45048153|emb|CAF31271.1| putative GTPase [Methanococcus maripaludis S2] Length = 157 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 34/169 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G +VGK++L+ L+ KN+ G+ +H V D+ ++ + Sbjct: 7 IVVMGSEDVGKTTLMENLI--KNV-------GKVEHNGTTVAIDYGRIEMDDKKFHFFGT 57 Query: 92 PG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG +G+ R + L++D G++++D D+ + L K Sbjct: 58 PGQERFGFMREIAVEGADYA----------------LLVLDATVGLRKVDNDIINLLSTK 101 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + + + + K+D + + A E + LI + I T S+ RK Sbjct: 102 NIPFSVFINKMDLCNESNAVEIINNLNGLIESSN------IVTGSIYRK 144 >gi|255525914|ref|ZP_05392841.1| small GTP-binding protein [Clostridium carboxidivorans P7] gi|255510408|gb|EET86721.1| small GTP-binding protein [Clostridium carboxidivorans P7] Length = 411 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 32/192 (16%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+A IA G+ N GKSS+IN L ++ +A S G T + + + Sbjct: 8 PRANRLHIALFGKRNAGKSSIINALTGQE-IALVSEVKGTTTDPVYKAMEILP-----IG 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLIDCRHGVKQID 138 + L+D G +D G L L ++ + + L+ID GV D Sbjct: 62 PVVLIDTAG----------LDDEGEL--GELRKKKAMEVLTKTDVAILVIDAEIGVTDFD 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +D+ S + + + L K D ++ A E L ++IP S+V KG Sbjct: 110 KDILSKIRGRKIPVIGALNKTD-INNINADALSEMQNQL-------DLKLIPVSAVSNKG 161 Query: 199 IEVLRKAILETI 210 I++++ +++ + Sbjct: 162 IDLIKNELIKIV 173 >gi|157737421|ref|YP_001490104.1| GTP-binding protein EngA [Arcobacter butzleri RM4018] gi|157699275|gb|ABV67435.1| GTP-binding protein [Arcobacter butzleri RM4018] Length = 485 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 13/180 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSS++N +V + R+ +P ++ P D S + + VD Sbjct: 220 VAIIGRVNVGKSSVLNAIVGAE---RSVVSPIAGTTID---PVDES-FEYKEKQITFVDT 272 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + ++ + + + + E++ + V L D + +D+ + +D+ + Sbjct: 273 AGL-RRRGSIEGIEKYALMRTKEMLEKANMALVVL--DASRELTDLDEKIAGLVDEYGLG 329 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 IVL K D+ + T Q+ E+ + R + + P +I S+ + IE L+ I+E + Sbjct: 330 TIIVLNKWDE-NMDTFQKIEEEIRRRFR-FLSYAP-IIAVSAKTGRSIERLKDKIIEIFD 386 >gi|53715371|ref|YP_101363.1| GTP-binding protein EngA [Bacteroides fragilis YCH46] gi|60683339|ref|YP_213483.1| GTP-binding protein EngA [Bacteroides fragilis NCTC 9343] gi|255011702|ref|ZP_05283828.1| GTP-binding protein EngA [Bacteroides fragilis 3_1_12] gi|265767858|ref|ZP_06095390.1| ribosome-associated GTPase EngA [Bacteroides sp. 2_1_16] gi|313149536|ref|ZP_07811729.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|81313609|sp|Q5L8K8|DER_BACFN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|81824906|sp|Q64NV3|DER_BACFR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|52218236|dbj|BAD50829.1| putative phosphoglycerate dehydrogenase [Bacteroides fragilis YCH46] gi|60494773|emb|CAH09579.1| putative GTP-binding protein [Bacteroides fragilis NCTC 9343] gi|263252530|gb|EEZ24058.1| ribosome-associated GTPase EngA [Bacteroides sp. 2_1_16] gi|301164828|emb|CBW24388.1| putative GTP-binding protein [Bacteroides fragilis 638R] gi|313138303|gb|EFR55663.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 437 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEERNIVTEIAGTTRDSIYTRYNKFGF--DFY------- 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + +VR + L++D G++ D ++FS Sbjct: 227 ---LVDTAGIRKKNKVNEDLEYYS--VVRSIRAIEGADVCILMVDATRGIESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEV 201 + K + +V+ K D L + ++ + IR+ P V ++ K++ ++V Sbjct: 282 IQKNSKGLVVVVNKWD-LVENKTDKVMKTFEEAIRSRFAPFVDFPIVFASALTKQRILKV 340 Query: 202 LRKA 205 L +A Sbjct: 341 LEEA 344 >gi|327479795|gb|AEA83105.1| GTP-binding protein Era [Pseudomonas stutzeri DSM 4166] Length = 303 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 26/184 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 17 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGSVQAVYVD 68 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG KN ++ + RY+ + S L+ V ++I + D+D + Sbjct: 69 TPGL------HKNGET---ALNRYMNRTAASALKDVDVVIFVVDRTRWTDEDQAVLERVQ 119 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ +++ K D++ E L ++L P A E++P S+ + +E L + + Sbjct: 120 YVTGPLIVAVNKTDRIEDKA--ELLPHLRWLAEQLPNA--EIVPISAQHGQNLETLEQLV 175 Query: 207 LETI 210 E + Sbjct: 176 AERL 179 >gi|296330032|ref|ZP_06872516.1| tRNA modification GTPase TrmE [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676756|ref|YP_003868428.1| tRNA modification GTPase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153071|gb|EFG93936.1| tRNA modification GTPase TrmE [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305415000|gb|ADM40119.1| tRNA modification GTPase [Bacillus subtilis subsp. spizizenii str. W23] Length = 459 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ A ++ PG T+ V +++ N++ +P + LVD G Sbjct: 228 GRPNVGKSSLLNSLVHEAK-AIVTDIPGTTRD----VIEEYVNVR-GVP-LRLVDTAGI- 279 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L +L+ + + ++DV F + + ++ Sbjct: 280 --RETEDIVERIGVERSRQVLKEADL----ILLVLNYSEELSEEDVKLFEAVEGMDVIVI 333 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D + ++ +R P V+ TS +K +GI L +AI Sbjct: 334 MNKTDLEAKIDSER--------VRELANGRP-VVTTSLLKEEGINDLEEAI 375 >gi|293365923|ref|ZP_06612626.1| ribosome-associated GTPase EngA [Streptococcus oralis ATCC 35037] gi|307702327|ref|ZP_07639285.1| small GTP-binding domain protein [Streptococcus oralis ATCC 35037] gi|315613624|ref|ZP_07888531.1| ribosome-associated GTPase EngA [Streptococcus sanguinis ATCC 49296] gi|291315601|gb|EFE56051.1| ribosome-associated GTPase EngA [Streptococcus oralis ATCC 35037] gi|307624130|gb|EFO03109.1| small GTP-binding domain protein [Streptococcus oralis ATCC 35037] gi|315314315|gb|EFU62360.1| ribosome-associated GTPase EngA [Streptococcus sanguinis ATCC 49296] Length = 436 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 19/160 (11%) Query: 24 LPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 + + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 167 VEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDTDG 222 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 ++D G + +N + + + +RS + V ++++ G+++ D+ + Sbjct: 223 Q--EFTMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRI 278 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++ + Sbjct: 279 AGFAHEAGKGMIIVVNKWD---------TLEKDNHTMKKW 309 >gi|259046714|ref|ZP_05737115.1| ribosome biogenesis GTP-binding protein YlqF [Granulicatella adiacens ATCC 49175] gi|259036610|gb|EEW37865.1| ribosome biogenesis GTP-binding protein YlqF [Granulicatella adiacens ATCC 49175] Length = 286 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 14/75 (18%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSN 78 E G+ P+ P + G NVGKS+ IN ++N KN A T+N PG T+ + + DF Sbjct: 114 EKGIRPR--PIRLMVLGIPNVGKSTFINRMIN-KNQAETANRPGVTKGQRWLKIGNDFE- 169 Query: 79 LKNNLPAMALVDMPG 93 L+D PG Sbjct: 170 ---------LLDTPG 175 >gi|225678353|gb|EEH16637.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 697 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 14/85 (16%) Query: 13 IFLRGVPEI----GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +FL P I G K P I G NVGKSS IN L+ K ++ S PG+T+H Sbjct: 338 LFLTAAPNIKPKDGDRGKPKPITIGLVGYPNVGKSSTINALLGAKKVS-VSATPGKTKHF 396 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPG 93 P + L D PG Sbjct: 397 QTLYLS---------PNLLLCDCPG 412 >gi|86170667|ref|XP_966060.1| translation initiation factor IF-2, putative [Plasmodium falciparum 3D7] gi|46362302|emb|CAG25240.1| translation initiation factor IF-2, putative [Plasmodium falciparum 3D7] Length = 977 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 44/211 (20%), Positives = 79/211 (37%), Gaps = 58/211 (27%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKDF---------SNLKN 81 + G + GK+ L++ L R + + A G TQ + F PKD +K Sbjct: 396 VCILGHVDTGKTKLLDKL--RHTNVQDNEAGGITQQIGATFFPKDVLDKEIKKIDDTIKC 453 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + ++D PG+ +K S + + L+ID HG++Q ++ Sbjct: 454 LSKGIMIIDTPGHESFYNLRKRGSSLCDIAI-------------LVIDLMHGLEQQTKES 500 Query: 142 FSFLDKKAVSYQIVLTKIDKL------------------SPTTAQETLEKTKYLIRNY-- 181 L ++ + I L KID+L P T +E ++ K +I Sbjct: 501 IQILKQRNCPFVIALNKIDRLYMWNKNDWSPFNNTFKKQKPDTQEEFHDRLKNIINELSE 560 Query: 182 -------------PTAHPEVIPTSSVKRKGI 199 P + ++PTS++ +GI Sbjct: 561 QGLNCQLYWENMNPRKYVSIVPTSAITGEGI 591 >gi|423553|pir||A44370 GTP-binding protein MMR1 - mouse Length = 382 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK + S PG T++ +F+ P Sbjct: 180 KDGVVTIGCIGFPNVGKSSLINGLVGRK-VVSVSRTPGHTRYFQTYFL----------TP 228 Query: 85 AMALVDMPG 93 ++ L D PG Sbjct: 229 SVKLCDCPG 237 >gi|302379576|ref|ZP_07268061.1| selenocysteine-specific translation elongation factor [Finegoldia magna ACS-171-V-Col3] gi|302312483|gb|EFK94479.1| selenocysteine-specific translation elongation factor [Finegoldia magna ACS-171-V-Col3] Length = 625 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 5/89 (5%) Query: 121 LRCVYLLIDCRHGV--KQIDQ-DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 + + L IDC+ GV + ++ D+ FL+K +VLTK D + ++T+E+ K L Sbjct: 77 MDMILLCIDCKEGVMPQTVEHLDILRFLNK--TEGIVVLTKRDLATDEETEKTIEQVKEL 134 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ + + S+ ++GI+ L + I Sbjct: 135 VKGTFLENCPICEVDSISKRGIDNLIQMI 163 >gi|296134487|ref|YP_003641734.1| small GTP-binding protein [Thermincola sp. JR] gi|296033065|gb|ADG83833.1| small GTP-binding protein [Thermincola potens JR] Length = 404 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 64/147 (43%), Gaps = 29/147 (19%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+A IA G N GKSSLIN L +NLA S+ PG T + K L L Sbjct: 5 PRADRIHIAIFGNRNAGKSSLINALTG-QNLAVVSDYPGTTTDPVY---KSMELLP--LG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLID--CRHGVKQ 136 + L+D G +D G L L + TL + +L+D C + Q Sbjct: 59 PVVLIDTAG----------LDDTGDL--GELRKGKTLEVLRKADLALVLVDAGCSN---Q 103 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLS 163 D+D+ + +K + VLTKIDK Sbjct: 104 SDEDLLHKIMEKKIPIIGVLTKIDKFG 130 >gi|242242754|ref|ZP_04797199.1| GTP-binding protein EngA [Staphylococcus epidermidis W23144] gi|242233890|gb|EES36202.1| GTP-binding protein EngA [Staphylococcus epidermidis W23144] Length = 436 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ + ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEERVI-VSNVAGTTRDA---IDTEYSYDGQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS V ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERS--EVVLVVIDAEQGIIEQDKRVAGYAHEEGKAIVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRN 180 + K D + + +T++K IRN Sbjct: 293 VNKWDTVEKDS--KTMKKFTDDIRN 315 >gi|227879096|ref|ZP_03996985.1| GTP-binding protein EngA [Lactobacillus crispatus JV-V01] gi|256843085|ref|ZP_05548573.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 125-2-CHN] gi|256850263|ref|ZP_05555692.1| phosphoglycerate dehydrogenase [Lactobacillus crispatus MV-1A-US] gi|262046345|ref|ZP_06019307.1| ribosome-associated GTPase EngA [Lactobacillus crispatus MV-3A-US] gi|293379768|ref|ZP_06625900.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 214-1] gi|312977269|ref|ZP_07789017.1| ribosome-associated GTPase EngA [Lactobacillus crispatus CTV-05] gi|227861337|gb|EEJ68967.1| GTP-binding protein EngA [Lactobacillus crispatus JV-V01] gi|256614505|gb|EEU19706.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 125-2-CHN] gi|256712900|gb|EEU27892.1| phosphoglycerate dehydrogenase [Lactobacillus crispatus MV-1A-US] gi|260573216|gb|EEX29774.1| ribosome-associated GTPase EngA [Lactobacillus crispatus MV-3A-US] gi|290923677|gb|EFE00548.1| ribosome-associated GTPase EngA [Lactobacillus crispatus 214-1] gi|310895700|gb|EFQ44766.1| ribosome-associated GTPase EngA [Lactobacillus crispatus CTV-05] Length = 435 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 13/142 (9%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I+FS GR NVGKSS++N L+ + +N G T+ P +K + A + Sbjct: 175 ISFSVIGRPNVGKSSIVNKLLGEDRVI-VANEEGTTRDA-VDTPFTHDGVKFKVVDTAGI 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G Y + K +V +R +S V L++D G+++ D+ V + + Sbjct: 233 RRRGKVYEKTEKYSV-------MRAMSAIERSDVVLLVLDASTGIREQDKHVAGYAHEAG 285 Query: 150 VSYQIVLTKID--KLSPTTAQE 169 IV+ K D K + T+A+E Sbjct: 286 RGIIIVVNKWDLPKKNSTSAKE 307 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A G+ NVGKS+L N ++N++ LA + PG T+ N+ Sbjct: 4 PVVAIVGQPNVGKSTLFNRIINQR-LAIVEDKPGVTRDRNY 43 >gi|323341065|ref|ZP_08081313.1| tRNA modification GTPase TrmE [Lactobacillus ruminis ATCC 25644] gi|323091486|gb|EFZ34110.1| tRNA modification GTPase TrmE [Lactobacillus ruminis ATCC 25644] Length = 462 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 25/175 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L++ ++ A ++ G T+ V +++ N+ + +P + L+D Sbjct: 228 ALVGRPNVGKSSLLNHLLH-EDKAIVTDVAGTTRD----VIEEYVNV-SGVP-LKLIDTA 280 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVS 151 G R V+ G + E+S L V L+++ + + D ++ DKK + Sbjct: 281 GI---RETDDKVEKIGVERSKKAIEQSDL--VLLVLNAAESLTKEDLELIRLTNDKKRI- 334 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I+L K D +E L++ K L + + + V TS +K +G+E L +AI Sbjct: 335 --IILNKTD------LEEKLDR-KELAK--ISGNAPVYATSILKNEGVEALEEAI 378 >gi|20808046|ref|NP_623217.1| GTP-binding protein EngA [Thermoanaerobacter tengcongensis MB4] gi|26006716|sp|Q8R9J1|DER_THETN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|20516626|gb|AAM24821.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4] Length = 439 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 11/136 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N ++ R+ ++ + PG T+ + ++ N K LVD Sbjct: 6 VAIVGRPNVGKSTLFNRILKRR-ISIVEDIPGVTRD-RIYGNAEWLNRK-----FILVDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G PK + S L V E + L + ++D R G+ D+++ + L K Sbjct: 59 GGLD--PDPKDVIFSKVKLQVEAAIEAADL--ILFVVDAREGLVPEDEEIANMLRKTKKE 114 Query: 152 YQIVLTKIDKLSPTTA 167 +V K+D A Sbjct: 115 VILVCNKVDSFKEMPA 130 >gi|327357252|gb|EGE86109.1| ribosome biogenesis GTPase Lsg1 [Ajellomyces dermatitidis ATCC 18188] Length = 688 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 14/85 (16%) Query: 13 IFLRGVPEI----GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +FL P I G K P + G NVGKSS IN L+ K ++ S PG+T+H Sbjct: 330 LFLTAAPHIQKNEGENGKPKPTTVGLVGYPNVGKSSTINALLGAKKVS-VSATPGKTKHF 388 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPG 93 P + L D PG Sbjct: 389 QTLYLS---------PNLLLCDCPG 404 >gi|253567260|ref|ZP_04844710.1| GTP-binding protein engA [Bacteroides sp. 3_2_5] gi|251944091|gb|EES84610.1| GTP-binding protein engA [Bacteroides sp. 3_2_5] Length = 437 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEERNIVTEIAGTTRDSIYTRYNKFGF--DFY------- 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + +VR + L++D G++ D ++FS Sbjct: 227 ---LVDTAGIRKKNKVNEDLEYYS--VVRSIRAIEGADVCILMVDATRGIESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHPEVIPTSSVKRKGIEV 201 + K + +V+ K D L + ++ + IR+ P V ++ K++ ++V Sbjct: 282 IQKNSKGLVVVVNKWD-LVENKTDKVMKTFEEAIRSRFAPFVDFPIVFASALTKQRILKV 340 Query: 202 LRKA 205 L +A Sbjct: 341 LEEA 344 >gi|254525774|ref|ZP_05137826.1| tRNA modification GTPase TrmE [Prochlorococcus marinus str. MIT 9202] gi|221537198|gb|EEE39651.1| tRNA modification GTPase TrmE [Prochlorococcus marinus str. MIT 9202] Length = 303 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 13/70 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAMAL 88 IA G++NVGKSSL+N+L +K A +N PG T+ +N + N++P M + Sbjct: 230 IALIGKTNVGKSSLLNLLA-KKEKAIVTNIPGTTRDVIEVNLTI--------NDIP-MKI 279 Query: 89 VDMPGYGYAR 98 +D G R Sbjct: 280 IDTAGIRETR 289 >gi|168334058|ref|ZP_02692274.1| small GTP-binding protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 455 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 9/133 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ NVGKSSL+N ++ + + A + ++ V D L+D Sbjct: 192 KVAIVGKPNVGKSSLVNKILGEDRVIVSDIAGTTRESVDTEVVIDGQKY-------VLID 244 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + K++++ + ++R +S V +LID G+ + D + + Sbjct: 245 TAGVRKRKKVKEDIEKYS--VIRTISAIERADIVLILIDANEGITEQDTKIAGMAHEAGK 302 Query: 151 SYQIVLTKIDKLS 163 IV+ K D + Sbjct: 303 GSIIVVNKWDAIE 315 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 21/139 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K ++ + PG T+ + ++ N K LV Sbjct: 17 PVVAVVGRPNVGKSTLFNRLAKAK-ISIIDDTPGVTRD-RIYADAEWLNKK-----FTLV 69 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P N +I+ + +++ T + L+D + GV D V + Sbjct: 70 DTGGI----EPDSN-----DVILSQMRKQAEVAIDTADVIIFLVDVKTGVVDSDMHVANM 120 Query: 145 LDKKAVSYQIVLTKIDKLS 163 + K +V+ K+D ++ Sbjct: 121 VRKSQKPVVLVVNKVDDMA 139 >gi|113868334|ref|YP_726823.1| GTP-binding protein EngA [Ralstonia eutropha H16] gi|113527110|emb|CAJ93455.1| GTP-binding protein [Ralstonia eutropha H16] Length = 456 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 11/150 (7%) Query: 19 PEIGL-LPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PE+G +P G +IA GR NVGKS+L+N L+ + + + PG T+ + Sbjct: 177 PELGEEIPDEGKGVKIAIVGRPNVGKSTLVNTLIGEERVI-AFDMPGTTRDAIYV----- 230 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + L+D G + ++ + +V+ L + V LL+D + + Sbjct: 231 -EFERGGKPYTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSIADANVVILLLDAQQDISD 287 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 D + F+ + + + + K D L T Sbjct: 288 QDAHIAGFIVESGRALVVGVNKWDGLDGHT 317 >gi|89100947|ref|ZP_01173794.1| tRNA modification GTPase [Bacillus sp. NRRL B-14911] gi|89084356|gb|EAR63510.1| tRNA modification GTPase [Bacillus sp. NRRL B-14911] Length = 461 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 88/171 (51%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ +N A ++ PG T+ V +++ N++ +P + L+D G Sbjct: 230 GRPNVGKSSLLNSLVH-ENKAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLLDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + + + L + L+++ + Q D+++F ++ V ++ Sbjct: 282 --RETEDIVERIGVERSRQVLKEADL--ILLVVNYSDELTQEDENLFKVVEDMDVI--VI 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D Q +E+ +R H ++ TS ++ +G++ L ++I Sbjct: 336 VNKTD----LPQQIDMER----VRELAAGH-RLVTTSLLEDQGVDELEESI 377 >gi|332673360|gb|AEE70177.1| ribosome-associated GTPase EngA [Helicobacter pylori 83] Length = 460 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 200 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 252 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 253 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSTPFVELDEKISSLADKHSL 309 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 310 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKTRHIDEIKHKIIE 364 >gi|299144092|ref|ZP_07037172.1| ribosome-associated GTPase EngA [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518577|gb|EFI42316.1| ribosome-associated GTPase EngA [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 439 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 23/120 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-----LNFFVPKDFSNLKNNLPAM 86 + F G+ NVGKSSLIN ++ + + T + PG T+ NF N Sbjct: 178 VTFIGKPNVGKSSLINRILGEERVIVT-DIPGTTRDAIDSKFNF-----------NGENY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G + +N++ + ++R L+ ER+++ CV L+ID GV + D + + Sbjct: 226 VFVDTAGLRKKKKIYENIERYS--VIRTLTAIERASV-CV-LVIDAYEGVSEQDSKIVGY 281 >gi|261198425|ref|XP_002625614.1| ribosome biogenesis GTPase Lsg1 [Ajellomyces dermatitidis SLH14081] gi|239594766|gb|EEQ77347.1| ribosome biogenesis GTPase Lsg1 [Ajellomyces dermatitidis SLH14081] gi|239610112|gb|EEQ87099.1| ribosome biogenesis GTPase Lsg1 [Ajellomyces dermatitidis ER-3] Length = 688 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 14/85 (16%) Query: 13 IFLRGVPEI----GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +FL P I G K P + G NVGKSS IN L+ K ++ S PG+T+H Sbjct: 330 LFLTAAPHIQKNEGENGKPKPTTVGLVGYPNVGKSSTINALLGAKKVS-VSATPGKTKHF 388 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPG 93 P + L D PG Sbjct: 389 QTLYLS---------PNLLLCDCPG 404 >gi|257065214|ref|YP_003144886.1| selenocysteine-specific elongation factor SelB [Slackia heliotrinireducens DSM 20476] gi|256792867|gb|ACV23537.1| selenocysteine-specific elongation factor SelB [Slackia heliotrinireducens DSM 20476] Length = 641 Score = 36.2 bits (82), Expect = 3.2, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 16/124 (12%) Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCRHGVKQIDQDVFS 143 +M +VD+PG+ VR + ST + L+I GV + + Sbjct: 60 SMGVVDVPGHEK--------------FVRQMIAGSTGIDVALLVIAADDGVMPQTLEHLA 105 Query: 144 FLDKKAVSYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L V +V LTKID P + E L+ N P A +IP SS +G+E + Sbjct: 106 VLQTLGVPTCVVALTKIDLCDPEWVELVTEDINSLLSNTPFAGAPIIPCSSRTGEGVEDV 165 Query: 203 RKAI 206 R A+ Sbjct: 166 RAAL 169 >gi|206900693|ref|YP_002251652.1| tRNA modification GTPase TrmE [Dictyoglomus thermophilum H-6-12] gi|206739796|gb|ACI18854.1| tRNA modification GTPase TrmE [Dictyoglomus thermophilum H-6-12] Length = 455 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 38/183 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV-- 89 + GR NVGKSSL N L+ R++ A + PG T +D+ + L + LV Sbjct: 221 VILVGRPNVGKSSLFNALM-REDRAIVTPIPGTT--------RDYIEGELYLSSGHLVKI 271 Query: 90 -DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID--QDVFSFLD 146 D G G PK +D G + E+S L + C ++I+ + + S+ + Sbjct: 272 YDTAGLG---IPKDILDKMGMERTEKILEKSNLILFVVDGSCEASEEEINLLEKIKSYQN 328 Query: 147 KKAVSYQIVLTKID---KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 KK + +V+ KID K+ + + +EK I S+ +RKGIE + Sbjct: 329 KKLI---LVVNKIDLPQKVDLSVFPKDIEK---------------IFVSAKERKGIEEIE 370 Query: 204 KAI 206 K I Sbjct: 371 KVI 373 >gi|168046695|ref|XP_001775808.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672815|gb|EDQ59347.1| predicted protein [Physcomitrella patens subsp. patens] Length = 295 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 12/72 (16%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 GLLP+ A G NVGKSSLIN L+ RK A + PG T+HL + D Sbjct: 130 GLLPRN--VRAAVVGYPNVGKSSLINRLLKRKVCA-AAPRPGVTKHLQWARVVD------ 180 Query: 82 NLPAMALVDMPG 93 + L+D PG Sbjct: 181 ---GLDLLDAPG 189 >gi|326668705|ref|XP_691680.5| PREDICTED: putative GTP-binding protein 6 [Danio rerio] Length = 543 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 15/34 (44%), Positives = 24/34 (70%) Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 LI Y ++ PEVIP S++K+ G+E L++ I E + Sbjct: 437 LIEGYESSDPEVIPISALKQCGLEALKEKIEEAV 470 >gi|294011701|ref|YP_003545161.1| GTP-binding protein Era [Sphingobium japonicum UT26S] gi|292675031|dbj|BAI96549.1| GTP-binding protein Era [Sphingobium japonicum UT26S] Length = 302 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 26/136 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVD 90 IA G N GKS+L+N LV +K + A RT+ + + D M LVD Sbjct: 13 IAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQ--------MVLVD 64 Query: 91 MPGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 PG PK+ +D +WGG ++ + L + L++D + G+ + + Sbjct: 65 TPGI---FQPKRRLDRAMVQAAWGG------AQGADL--IALVVDGKAGLGAKMEPIVGA 113 Query: 145 LDKKAVSYQIVLTKID 160 L + ++L K+D Sbjct: 114 LAARPEKKWLILNKVD 129 >gi|206890575|ref|YP_002249177.1| ribosome-associated GTPase EngA [Thermodesulfovibrio yellowstonii DSM 11347] gi|238058979|sp|B5YFX9|DER_THEYD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|206742513|gb|ACI21570.1| ribosome-associated GTPase EngA [Thermodesulfovibrio yellowstonii DSM 11347] Length = 448 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 18/160 (11%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 L + P+IA GR NVGKS++IN L+ +K + S PG T+ + + Sbjct: 175 LEQQNLPKIAVVGRPNVGKSTIINALLGKKRMI-VSPIPGTTRDTIDAICTYYGK----- 228 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLIDCRHGVKQI 137 L+D G KK + + V L+ LR + L+ID G+ Sbjct: 229 -KYLLIDTAGIKRLSYYKKEISQ--EIYVERLAYFKALRSIERADVAILVIDALEGIVNQ 285 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 DQ + + ++ I++ K D L P A E +K K+ Sbjct: 286 DQKIAGIVAEQKKGLIILINKWD-LIP--ANERDKKAKFF 322 >gi|150026003|ref|YP_001296829.1| GTP-binding protein EngA [Flavobacterium psychrophilum JIP02/86] gi|166198714|sp|A6H103|DER_FLAPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|149772544|emb|CAL44027.1| GTP-binding protein EngA [Flavobacterium psychrophilum JIP02/86] Length = 436 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 9/137 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P A GR N GKSS IN L+ ++ T A ++ D + N LV Sbjct: 177 PRFAVVGRPNAGKSSFINALIGKERFMVTDIAGTTRDSID--TKYDRFGFEFN-----LV 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + ++R + L+ID G + DQ +F +K Sbjct: 230 DTAGIRRKAKVKEDLEFYS--VMRSVRAIEHADVCILIIDATRGFEGQDQSIFWLAEKNR 287 Query: 150 VSYQIVLTKIDKLSPTT 166 I++ K D + T Sbjct: 288 KGVVILVNKWDLVEKDT 304 >gi|315923956|ref|ZP_07920184.1| GTP-binding protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315622796|gb|EFV02749.1| GTP-binding protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 410 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 18/132 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GR N GKSSL+N V + +A S G T P + + + + ++D Sbjct: 25 IGFFGRRNAGKSSLVNA-VTGQAMAVVSETAGTTTD-----PVEKTMELLPIGPVLIIDT 78 Query: 92 PGYGYARAPKKNVDSWGGLIV---RYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG +V + G V R + +R+ + L++D G+ D+ + + ++K Sbjct: 79 PG-------TDDVGALGEKRVARAREVLDRTDI--AVLVVDGAVGLTADDRRLLALFEEK 129 Query: 149 AVSYQIVLTKID 160 V Y +V+ K D Sbjct: 130 QVPYLVVMNKCD 141 >gi|260881015|ref|ZP_05403389.2| ribosome-associated GTPase EngA [Mitsuokella multacida DSM 20544] gi|260850181|gb|EEX70188.1| ribosome-associated GTPase EngA [Mitsuokella multacida DSM 20544] Length = 445 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 11/147 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IA GR NVGKSS++N ++ + + S+ PG T+ ++ KD + L+D Sbjct: 181 IAVIGRPNVGKSSIVNAILGEERVI-VSDVPGTTRDAIDTHFTKDGTKF-------TLID 232 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + ++R L V ++I+ G+ + D+ + + + Sbjct: 233 TAGMRRRGKIDEPVERYS--VMRSLRAIDRADVVLMMINAFEGITEQDKKIAGYAHESGK 290 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYL 177 IV+ K D + TL T L Sbjct: 291 GVVIVVNKWDIYPDKDDKSTLRFTDEL 317 >gi|225871164|ref|YP_002747111.1| GTP-binding protein EngA [Streptococcus equi subsp. equi 4047] gi|225700568|emb|CAW95070.1| GTP-binding protein EngA [Streptococcus equi subsp. equi 4047] Length = 446 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 14/146 (9%) Query: 24 LPKAGPPE----IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 LP P E I FS GR NVGKSSLIN ++ + + S G T+ D S Sbjct: 173 LPIEEPVENDDVIRFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRD-----AIDTS 226 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + A ++D G + +N + + + +RS + V ++I+ G++ Sbjct: 227 FTDESGQAYTMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDI--VLMVINAEEGIRDY 284 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLS 163 D+ + F + IV+ K D + Sbjct: 285 DKRIAGFAHEAGKGMIIVVNKWDTIE 310 >gi|67473050|ref|XP_652306.1| translation initiation factor IF-2 [Entamoeba histolytica HM-1:IMSS] gi|56469139|gb|EAL46920.1| translation initiation factor IF-2, putative [Entamoeba histolytica HM-1:IMSS] Length = 890 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 31/151 (20%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL-NFFVP---------- 73 PK P G + GK+ +++ + R N+ R A G TQ + + F P Sbjct: 296 PKYRSPICCVLGHVDTGKTKILDRM-RRTNVQR-GEAGGITQQIGSTFFPLDSIEKMTEK 353 Query: 74 -KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDC 130 KD + LK +P + ++D PG+ L R T C L++D Sbjct: 354 MKDKTKLKFKIPGLLVMDTPGHEA---------------FNNLRSRGTSLCDIAVLVVDL 398 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 HG++ + + L +K + + L KID+ Sbjct: 399 MHGLEPQTIESINLLKQKNTPFVVALNKIDR 429 >gi|330501743|ref|YP_004378612.1| selenocysteine-specific elongation factor [Pseudomonas mendocina NK-01] gi|328916029|gb|AEB56860.1| selenocysteine-specific elongation factor [Pseudomonas mendocina NK-01] Length = 661 Score = 36.2 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 31/54 (57%) Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + LTKID++ + E+ + L+ P A E++ S+ +G+E+LR+ +L Sbjct: 109 VALTKIDRVDAARVHQVREQVENLLAPGPLAGAELLAVDSLSGRGVELLRERLL 162 >gi|325266146|ref|ZP_08132830.1| ribosome biogenesis GTP-binding protein YlqF [Kingella denitrificans ATCC 33394] gi|324982376|gb|EGC18004.1| ribosome biogenesis GTP-binding protein YlqF [Kingella denitrificans ATCC 33394] Length = 313 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN +V +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMVGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|319946441|ref|ZP_08020678.1| ribosome-associated GTPase EngA [Streptococcus australis ATCC 700641] gi|319747409|gb|EFV99665.1| ribosome-associated GTPase EngA [Streptococcus australis ATCC 700641] Length = 436 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 23/164 (14%) Query: 24 LPKAGPPE----IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 LP PE I FS GR NVGKSSLIN ++ + S G T+ + F+ Sbjct: 163 LPTDREPENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFT 218 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + ++D G + +N + + ++R + V ++++ G+++ Sbjct: 219 DAEGQ--EYTMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVLNAEEGIREY 274 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 D+ + F + IV+ K D TLEK + ++ + Sbjct: 275 DKRIAGFAHEAGKGMIIVVNKWD---------TLEKDNHTMKQW 309 >gi|332663276|ref|YP_004446064.1| GTP-binding protein engA [Haliscomenobacter hydrossis DSM 1100] gi|332332090|gb|AEE49191.1| GTP-binding protein engA [Haliscomenobacter hydrossis DSM 1100] Length = 434 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 11/138 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNR-KNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P A G+ NVGKSSL N L+ +N+ R + D L Sbjct: 175 PRFAIVGQPNVGKSSLTNALLGEDRNIVTEIAGTTRDSIDALYTKFD--------KEFIL 226 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G +N++ + ++R + L+ID + GV+ DQ +F ++ Sbjct: 227 VDTAGIRKKAKVHENLEFYS--VLRAIKAIEDCDVCILMIDAQTGVESQDQAIFRLAQRR 284 Query: 149 AVSYQIVLTKIDKLSPTT 166 I++ K D + +T Sbjct: 285 NKGIVILVNKWDLVEKST 302 >gi|327484952|gb|AEA79359.1| GTP-binding protein Era [Vibrio cholerae LMA3894-4] Length = 325 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V + A+ VD Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETE-----GKYQAI-YVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 87 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFNKLQKANF 140 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + P +++P S+ + K +VL+K + E + Sbjct: 141 PVVLCVNKVDQVKDRN--EVMLHMLELSKRMPFV--DIVPISAKQGKNTDVLKKHVREHL 196 >gi|325115126|emb|CBZ50682.1| hypothetical protein NCLIV_011480 [Neospora caninum Liverpool] Length = 631 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 15/184 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS L+N L+ + A ++ V +D + LVD Sbjct: 396 VAIVGRPNVGKSQLLNRLLGVSRSLVSPEAGTTRDAVDELVERDSVVYR-------LVDT 448 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF--SFLDKKA 149 G AR K + ++ R +ER+ RC L+ C + QDV ++++ Sbjct: 449 AGIRRARVVKAQQGTEFVMVKR--AERALTRCDVCLLVCDAERGLVKQDVLLAKRIEEEG 506 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + IV+ K D + T A E Y IR+ YP ++ S++ K + AI Sbjct: 507 RAAVIVMNKWDTVD-TEATAHHEVATY-IRSVFYPLRWASIVCVSALTGKNASSIWPAIN 564 Query: 208 ETIN 211 E Sbjct: 565 EAFQ 568 >gi|313888319|ref|ZP_07821990.1| ribosome biogenesis GTPase Der [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845722|gb|EFR33112.1| ribosome biogenesis GTPase Der [Peptoniphilus harei ACS-146-V-Sch2b] Length = 446 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 22/161 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G+ NVGKSSL+N L +N + +N PG T+ S +K VD Sbjct: 178 VTLIGKPNVGKSSLLNYLTG-ENRSIVTNIPGTTRD------SIDSLIKYKGNEYIFVDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G + V+ + ++R L+ ERS + CV L+ID GV + D + + Sbjct: 231 AGLRKKKKIVPGVERYS--VIRTLTAIERSNV-CV-LMIDALEGVTEQDSKIVGYAHDNN 286 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + I + K D LEK +RN+ E +P Sbjct: 287 KAIIIAVNKWD---------ALEKETKTMRNFEKKIREELP 318 >gi|72383562|ref|YP_292917.1| GTP-binding protein EngA [Prochlorococcus marinus str. NATL2A] gi|123620367|sp|Q46H20|DER_PROMT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|72003412|gb|AAZ59214.1| Small GTP-binding protein protein domain:GTP-binding protein [Prochlorococcus marinus str. NATL2A] Length = 456 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 17/176 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + + A S+ G T+ + + + L Sbjct: 177 PVQLAIIGRPNVGKSSLLNSICG-ETRAIVSSIRGTTRDTI------DTRITHQGKEWKL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R+ + +G I R ERS + CV L+ID GV + DQ + ++ Sbjct: 230 VDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIE 200 ++ + IV+ K D + + T+ + IR+ Y ++I TS+V + +E Sbjct: 286 QEGRACLIVINKWDAVEKDS--HTMSAMEKDIRSKLYFLDWAQMIFTSAVTGQRVE 339 >gi|331685257|ref|ZP_08385843.1| selenocysteine-specific translation elongation factor [Escherichia coli H299] gi|331077628|gb|EGI48840.1| selenocysteine-specific translation elongation factor [Escherichia coli H299] Length = 614 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEMLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|295094544|emb|CBK83635.1| iron-only hydrogenase maturation protein HydF [Coprococcus sp. ART55/1] Length = 411 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 33/186 (17%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I F G N GKSSL+N V ++LA S+ G T V K L L Sbjct: 7 PSANRVHIGFFGCRNAGKSSLVN-AVTGQSLAVVSDVAGTTTDP---VYKSMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTL---RCVYLLIDCRHGVKQIDQD 140 + ++D PG +D G L +R R L L++D G+ D++ Sbjct: 61 PVVIIDTPG----------IDDTGELGELRVSKTRQVLAKIDVAVLVVDGSVGLSAADRE 110 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +K ++Y I K D L K ++N + I S+ +R+GIE Sbjct: 111 LTELFKEKNINYIIAYNKSD----------LVKDDIQVQN---SAENSIWVSAERRQGIE 157 Query: 201 VLRKAI 206 L++ I Sbjct: 158 ELKELI 163 >gi|254478784|ref|ZP_05092152.1| putative GTPase [Carboxydibrachium pacificum DSM 12653] gi|214035296|gb|EEB76002.1| putative GTPase [Carboxydibrachium pacificum DSM 12653] Length = 439 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 11/136 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N ++ R+ ++ + PG T+ + ++ N K LVD Sbjct: 6 VAIVGRPNVGKSTLFNRILKRR-ISIVEDIPGVTRD-RIYGNAEWLNRK-----FILVDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G PK + S L V E + L + ++D R G+ D+++ + L K Sbjct: 59 GGLD--PDPKDVIFSKVKLQVEAAIEAADL--ILFVVDAREGLVPEDEEIANMLRKTKKE 114 Query: 152 YQIVLTKIDKLSPTTA 167 +V K+D A Sbjct: 115 VILVCNKVDSFKEMPA 130 >gi|153214498|ref|ZP_01949407.1| GTP-binding protein Era [Vibrio cholerae 1587] gi|153803091|ref|ZP_01957677.1| GTP-binding protein Era [Vibrio cholerae MZO-3] gi|153826892|ref|ZP_01979559.1| GTP-binding protein Era [Vibrio cholerae MZO-2] gi|153830876|ref|ZP_01983543.1| GTP-binding protein Era [Vibrio cholerae 623-39] gi|229524447|ref|ZP_04413852.1| GTP-binding protein Era [Vibrio cholerae bv. albensis VL426] gi|229527068|ref|ZP_04416463.1| GTP-binding protein Era [Vibrio cholerae 12129(1)] gi|254226245|ref|ZP_04919838.1| GTP-binding protein Era [Vibrio cholerae V51] gi|254291660|ref|ZP_04962448.1| GTP-binding protein Era [Vibrio cholerae AM-19226] gi|262190710|ref|ZP_06048941.1| GTP-binding protein Era [Vibrio cholerae CT 5369-93] gi|297581084|ref|ZP_06943009.1| GTP-binding protein Era [Vibrio cholerae RC385] gi|124115300|gb|EAY34120.1| GTP-binding protein Era [Vibrio cholerae 1587] gi|124121373|gb|EAY40116.1| GTP-binding protein Era [Vibrio cholerae MZO-3] gi|125621218|gb|EAZ49559.1| GTP-binding protein Era [Vibrio cholerae V51] gi|148873645|gb|EDL71780.1| GTP-binding protein Era [Vibrio cholerae 623-39] gi|149739255|gb|EDM53517.1| GTP-binding protein Era [Vibrio cholerae MZO-2] gi|150422432|gb|EDN14391.1| GTP-binding protein Era [Vibrio cholerae AM-19226] gi|229335465|gb|EEO00947.1| GTP-binding protein Era [Vibrio cholerae 12129(1)] gi|229338028|gb|EEO03045.1| GTP-binding protein Era [Vibrio cholerae bv. albensis VL426] gi|262033422|gb|EEY51929.1| GTP-binding protein Era [Vibrio cholerae CT 5369-93] gi|297534910|gb|EFH73746.1| GTP-binding protein Era [Vibrio cholerae RC385] Length = 324 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V + A+ VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETE-----GKYQAI-YVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + P +++P S+ + K +VL+K + E + Sbjct: 140 PVVLCVNKVDQVKDRN--EVMLHMLELSKRMPFV--DIVPISAKQGKNTDVLKKHVREHL 195 >gi|295395372|ref|ZP_06805571.1| translation initiation factor IF2 [Brevibacterium mcbrellneri ATCC 49030] gi|294971694|gb|EFG47570.1| translation initiation factor IF2 [Brevibacterium mcbrellneri ATCC 49030] Length = 658 Score = 36.2 bits (82), Expect = 3.3, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 24/192 (12%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKN 81 ++P+ PP + G + GK+ L++ + R + + A G TQH+ + V D K Sbjct: 149 MVPR--PPVVTVMGHVDHGKTKLLDAI--RSSNVVSGEAGGITQHIGAYQVSVDHEGDKR 204 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + +D PG+ A +R +ST L++ GV + Sbjct: 205 ---PITFLDTPGHEAFTA------------MRARGAKST-DVAILVVAADDGVMPQTIEA 248 Query: 142 FSFLDKKAVSYQIVLTKIDK--LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + V + + KIDK +P+ + L + + +Y +P S+++RKGI Sbjct: 249 LNHAQAADVPIVVAVNKIDKDTANPSKVMQQLTEYNLVAEDY-GGDTMFVPISALQRKGI 307 Query: 200 EVLRKAILETIN 211 + L +A+L T + Sbjct: 308 DDLLEAVLLTTD 319 >gi|241759805|ref|ZP_04757905.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria flavescens SK114] gi|241319813|gb|EER56209.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria flavescens SK114] Length = 313 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|229521287|ref|ZP_04410707.1| GTP-binding protein Era [Vibrio cholerae TM 11079-80] gi|229341819|gb|EEO06821.1| GTP-binding protein Era [Vibrio cholerae TM 11079-80] Length = 324 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V + A+ VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETE-----GKYQAI-YVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + P +++P S+ + K +VL+K + E + Sbjct: 140 PVVLCVNKVDQVKDRN--EVMLHMLELSKRMPFV--DIVPISAKQGKNTDVLKKHVREHL 195 >gi|257066409|ref|YP_003152665.1| small GTP-binding protein [Anaerococcus prevotii DSM 20548] gi|256798289|gb|ACV28944.1| small GTP-binding protein [Anaerococcus prevotii DSM 20548] Length = 439 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 10/143 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ N GKSSL+N+L+N + + T A ++ S + N L+D Sbjct: 178 IAIIGKPNAGKSSLVNLLLNEERMIVTDIAGTTRDAVD-------SYWQYNDHNYVLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+NV+ + R + LID GV + D + + + + Sbjct: 231 AGLRRKSKVKENVEYYANQ--RTFDAVDSSEICLFLIDANVGVTEQDAKIAGYAHNQKKA 288 Query: 152 YQIVLTKIDKLS-PTTAQETLEK 173 I + K D + T LEK Sbjct: 289 IIIAVNKWDLVDKETNTMRNLEK 311 >gi|297587238|ref|ZP_06945883.1| selenocysteine-specific translation elongation factor [Finegoldia magna ATCC 53516] gi|297575219|gb|EFH93938.1| selenocysteine-specific translation elongation factor [Finegoldia magna ATCC 53516] Length = 625 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 5/89 (5%) Query: 121 LRCVYLLIDCRHGV--KQIDQ-DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 + + L IDC+ GV + ++ D+ FL+K +VLTK D + ++T+E+ K L Sbjct: 77 MDMILLCIDCKEGVMPQTVEHLDILRFLNK--TEGIVVLTKRDLATDEETEKTIEQVKEL 134 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ + + S+ ++GI+ L + I Sbjct: 135 VKGTFLENCPICEVDSISKRGIDNLIQMI 163 >gi|218129883|ref|ZP_03458687.1| hypothetical protein BACEGG_01465 [Bacteroides eggerthii DSM 20697] gi|217987993|gb|EEC54318.1| hypothetical protein BACEGG_01465 [Bacteroides eggerthii DSM 20697] Length = 461 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 29/191 (15%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N + A S+ G T+ V +D N+ Sbjct: 214 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLNEEK-AIVSDIHGTTRD----VIEDTVNIG 267 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V +ID + QI Q Sbjct: 268 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMIDATNAQTQITQL 320 Query: 141 VFSFLDK-KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT---SSVKR 196 L + +A +V K+D ++ + + PT P+ + + S+ KR Sbjct: 321 SSQLLPRCRAKQLILVYNKVDLVAN------------IQNDIPTNFPDDVKSIVISAKKR 368 Query: 197 KGIEVLRKAIL 207 + IE L++ ++ Sbjct: 369 EHIEELQQMLI 379 >gi|157363259|ref|YP_001470026.1| GTPase ObgE [Thermotoga lettingae TMO] gi|261277719|sp|A8F478|OBG_THELT RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|157313863|gb|ABV32962.1| GTP-binding protein Obg/CgtA [Thermotoga lettingae TMO] Length = 433 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 33/201 (16%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E+ LL AG G NVGKSSLI+ + N + + ++ P T N V K N Sbjct: 158 ELKLLADAG-----LIGFPNVGKSSLISAMSNAR--PKIADYPFTTLVPNLGVVKIDEN- 209 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL--IDCRHGVKQI 137 L D+PG RA + G L +R++ S L V + + R +K Sbjct: 210 ----SEFVLADIPGL-IERASEGA--GLGNLFLRHIERCSVLVHVIDISGSEGRDFIKDY 262 Query: 138 D---QDVFSFLDKKAVSYQIVLT-KIDKLSPTTAQ---ETLEKTKYLIRNYPTAHPEVIP 190 D Q++ + ++ + QI++ KID L + ETLEK A+ ++ P Sbjct: 263 DVIVQELCKYNEQLSRKPQIIVANKIDLLEKDELEKRLETLEK---------HANQKIYP 313 Query: 191 TSSVKRKGIEVLRKAILETIN 211 S++ R I++L++ I E + Sbjct: 314 VSALLRINIDILKQKIFEIVG 334 >gi|27904830|ref|NP_777956.1| translation initiation factor IF-2 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|31076720|sp|Q89AF5|IF2_BUCBP RecName: Full=Translation initiation factor IF-2 gi|27904228|gb|AAO27061.1| translation initiation factor IF-2 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 876 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 26/187 (13%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA-PGR-TQHLNFFVPKDFSNLKN 81 + K PP I G + GK+SL++ + L R +++ PGR TQH+ + ++K Sbjct: 375 IKKTRPPIITIMGHVDHGKTSLLD----KIRLTRVADSEPGRITQHIGAY------HIKI 424 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 N + +D PG+ A + + G + V L+I G+K + Sbjct: 425 NNKIITFLDTPGHSAFTAMR----ARGAQVTDI---------VILVIAIDDGIKPQTIEA 471 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR-KGIE 200 +V I + KIDKL + E TKY I + S K +GIE Sbjct: 472 IQHAQAASVPIIIAINKIDKLITNIEKIKNELTKYNILPEEWGGDNIFVNISAKSGEGIE 531 Query: 201 VLRKAIL 207 L AIL Sbjct: 532 SLLNAIL 538 >gi|308184621|ref|YP_003928754.1| GTP-binding protein EngA [Helicobacter pylori SJM180] gi|308060541|gb|ADO02437.1| GTP-binding protein EngA [Helicobacter pylori SJM180] Length = 462 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 202 QVGIIGRVNVGKSSLLNALT-KKERSLVSSMAGTT-----IDPIDETILIGD-QKICFVD 254 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 255 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 311 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 312 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 366 >gi|270293072|ref|ZP_06199283.1| ribosome-associated GTPase EngA [Streptococcus sp. M143] gi|270279051|gb|EFA24897.1| ribosome-associated GTPase EngA [Streptococcus sp. M143] Length = 436 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 19/160 (11%) Query: 24 LPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 + + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 167 VEEENPDVIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDADG 222 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 ++D G + +N + + ++R + V ++++ G+++ D+ + Sbjct: 223 Q--EFTMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVLNAEEGIREYDKRI 278 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D TLEK + ++ + Sbjct: 279 AGFAHEAGKGMIIVVNKWD---------TLEKDNHTMKKW 309 >gi|301091319|ref|XP_002895847.1| guanine nucleotide-binding protein [Phytophthora infestans T30-4] gi|262096558|gb|EEY54610.1| guanine nucleotide-binding protein [Phytophthora infestans T30-4] Length = 631 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 14/84 (16%) Query: 22 GLLPKAGPPE--IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 G + +A P+ I G NVGKSS++N L +K + S+ PG T+ L + Sbjct: 495 GAIGQANTPKVTIGLIGHPNVGKSSVLNALAGKK-IVSVSHTPGHTKRLQTIMIS----- 548 Query: 80 KNNLPAMALVDMPG--YGYARAPK 101 P + + D PG + +A PK Sbjct: 549 ----PEICICDCPGLVFPFAGVPK 568 >gi|210135034|ref|YP_002301473.1| GTP-binding protein EngA [Helicobacter pylori P12] gi|238058975|sp|B6JM65|DER_HELP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|210133002|gb|ACJ07993.1| GTP-binding protein-like protein [Helicobacter pylori P12] Length = 462 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 202 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 254 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 255 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSTPFVELDEKISSLADKHSL 311 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 312 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 366 >gi|147677944|ref|YP_001212159.1| GTP-binding protein EngA [Pelotomaculum thermopropionicum SI] gi|189037152|sp|A5D1U6|DER_PELTS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|146274041|dbj|BAF59790.1| predicted GTPase [Pelotomaculum thermopropionicum SI] Length = 440 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 4/41 (9%) Query: 29 PPE---IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 PPE IA GR NVGKSSL+N+++ + + SN PG T+ Sbjct: 173 PPEAIKIAVIGRPNVGKSSLVNLILGEERVI-VSNVPGTTR 212 >gi|110643835|ref|YP_671565.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli 536] gi|191170353|ref|ZP_03031906.1| selenocysteine-specific translation elongation factor [Escherichia coli F11] gi|218691877|ref|YP_002400089.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli ED1a] gi|300977019|ref|ZP_07173727.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 200-1] gi|110345427|gb|ABG71664.1| selenocysteine-specific elongation factor [Escherichia coli 536] gi|190909161|gb|EDV68747.1| selenocysteine-specific translation elongation factor [Escherichia coli F11] gi|218429441|emb|CAR10407.2| selenocysteinyl-tRNA-specific translation factor [Escherichia coli ED1a] gi|300308409|gb|EFJ62929.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 200-1] gi|324014254|gb|EGB83473.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 60-1] Length = 614 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEMLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|297180284|gb|ADI16503.1| predicted GTPases [uncultured bacterium HF4000_05M23] Length = 440 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 19/181 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR N GKS+L N L ++ A S PG T+ DF + + +D Sbjct: 180 VAIAGRPNAGKSALFNALAG-EDRAIVSPVPGTTRD-TLDSQFDFEGTR-----ITFLDT 232 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + + ERS + L++D V D + ++D + + Sbjct: 233 AGLRRRGKAEAGIEKYSAIRTIGAIERSYVSI--LVLDATEFVTAQDTHIGGYIDDASRA 290 Query: 152 YQIVLTKID-----KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K D KL A+E ++ I + P V+ TS++ +G+ L I Sbjct: 291 AVVVVNKWDLAYDLKLDRAEAEEEVKNRFKFIPDVP-----VVFTSALTGRGVNKLLPTI 345 Query: 207 L 207 + Sbjct: 346 I 346 >gi|296112016|ref|YP_003622398.1| GTP-binding protein EngA [Leuconostoc kimchii IMSNU 11154] gi|295833548|gb|ADG41429.1| GTP-binding protein EngA [Leuconostoc kimchii IMSNU 11154] Length = 437 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 18/153 (11%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL---NFFVPKDFSNLKNNLPAM 86 I FS GR NVGKSS++N ++ + S+ G T+ F P+ Sbjct: 176 IKFSIIGRPNVGKSSIVNAMLGEDRVI-VSSIEGTTRDAIDTRFVTPEG--------DEF 226 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VD G +N + + ++R L + ++ID G+++ D+ V F Sbjct: 227 IMVDTAGMRKRGKVYENTEKYS--VMRALKAIDNSNVILMVIDAEAGIREQDKHVAGFAH 284 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + + IV+ K D + T++ + LIR Sbjct: 285 EAGRAMIIVVNKWDAIEKD--DRTMKDFENLIR 315 >gi|165933610|ref|YP_001650399.1| GTP-binding protein Der [Rickettsia rickettsii str. Iowa] gi|189037156|sp|B0BUT3|DER_RICRO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|165908697|gb|ABY72993.1| GTP-binding protein [Rickettsia rickettsii str. Iowa] Length = 447 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 17/183 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I SGR N GKS+ IN L+N + L T G T+ + D+ KNN + L+D Sbjct: 181 QIVVSGRPNAGKSTFINALINDERLL-TGPEAGITRE---SIEIDWQ-YKNN--HIKLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++++ ++ V L+ID +KQ D ++ S + + Sbjct: 234 TAGLRKKSTITESLEKLSA--SDTINSIKLANTVILMIDALAPLKQQDLNIASHVVNEGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPT---SSVKRKGIEVLRKA 205 S IV+ K D + + + E+ Y I T P+V IP S++ ++ IE + A Sbjct: 292 SIVIVVNKWDLVKESEKEAFQEEFYYQIN---THLPQVKGIPVLFISAINKQNIEQVLDA 348 Query: 206 ILE 208 L+ Sbjct: 349 CLK 351 >gi|167522108|ref|XP_001745392.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776350|gb|EDQ89970.1| predicted protein [Monosiga brevicollis MX1] Length = 432 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 I G+ NVGKS++IN LV R + TS PG T+H Sbjct: 236 IGMIGQPNVGKSTIINSLVKRP-VVSTSQTPGHTKHFQ 272 >gi|124025156|ref|YP_001014272.1| GTP-binding protein EngA [Prochlorococcus marinus str. NATL1A] gi|166225837|sp|A2C0J7|DER_PROM1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123960224|gb|ABM75007.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str. NATL1A] Length = 456 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 17/176 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + + A S+ G T+ + + + L Sbjct: 177 PVQLAIIGRPNVGKSSLLNSICG-ETRAIVSSIRGTTRDTI------DTRITHQGKEWKL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R+ + +G I R ERS + CV L+ID GV + DQ + ++ Sbjct: 230 VDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIE 200 ++ + IV+ K D + + T+ + IR+ Y ++I TS+V + +E Sbjct: 286 QEGRACLIVINKWDAVEKDS--HTMSAMEKDIRSKLYFLDWAQMIFTSAVTGQRVE 339 >gi|313633473|gb|EFS00297.1| ribosome biogenesis GTP-binding protein YlqF [Listeria seeligeri FSL N1-067] gi|313638163|gb|EFS03419.1| ribosome biogenesis GTP-binding protein YlqF [Listeria seeligeri FSL S4-171] Length = 287 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|315302907|ref|ZP_07873643.1| ribosome biogenesis GTP-binding protein YlqF [Listeria ivanovii FSL F6-596] gi|313628721|gb|EFR97118.1| ribosome biogenesis GTP-binding protein YlqF [Listeria ivanovii FSL F6-596] Length = 287 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|291237985|ref|XP_002738912.1| PREDICTED: septin 2-like [Saccoglossus kowalevskii] Length = 387 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 27/150 (18%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL----VDM 91 G S +GKS+L+N L +L PG + ++ V D S ++ + L VD Sbjct: 62 GESGLGKSTLVNSLF-LTDLYPERQIPGAAEKIDKTVTIDASTVEIEERGVKLRLTVVDT 120 Query: 92 PGYGYARAPKKNVDSWGGLI-------VRYLSERSTLR-----------CVYLLIDCRHG 133 PGYG A N D + +I RYL + S L C Y + HG Sbjct: 121 PGYGDA---INNSDCFKPIIKYIDEQYERYLQDESGLNRRNIVDNRVHCCFYFISPTGHG 177 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLS 163 +K +D + L K V+ V+ K D L+ Sbjct: 178 LKPLDIEFMRALHHK-VNVVPVIAKSDTLT 206 >gi|256847025|ref|ZP_05552471.1| obg family GTPase CgtA [Lactobacillus coleohominis 101-4-CHN] gi|256715689|gb|EEU30664.1| obg family GTPase CgtA [Lactobacillus coleohominis 101-4-CHN] Length = 437 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 27/185 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G +VGKS+L++++ K +L + D + A+ D Sbjct: 162 DVGLIGYPSVGKSTLLSVVTGAKPKVAAYEFTTLVPNLGMVMLPDGRDF-------AMAD 214 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 MPG K V GL +++L R + L+D + + F ++ + Sbjct: 215 MPGL--IEGASKGV----GLGLQFLRHIERTRVLLHLVDMGSEDPEQAMERFRSINHELA 268 Query: 151 SYQ---------IVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGI 199 SY IV TK+D P +A + LEK K ++ T PEV P S+V GI Sbjct: 269 SYDPELLKRPQLIVATKMD--LPNSA-DNLEKFKKMLAKDQTLPEVPEVFPISAVTHAGI 325 Query: 200 EVLRK 204 + L K Sbjct: 326 DDLMK 330 >gi|291613885|ref|YP_003524042.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1] gi|291583997|gb|ADE11655.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1] Length = 465 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 31/144 (21%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E+ K+ P++A GR NVGKS+L+N ++ + + + PG T+ + DF Sbjct: 167 EVEAEEKSDHPKLAIVGRPNVGKSTLVNAILGEERVI-AFDQPGTTRDSIYI---DFERA 222 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 ++D G + ++ + +V+ L V L++D R + + D Sbjct: 223 GRQ---YTIIDTAGIRRRGKIDEAIEKFS--VVKTLQAIEDANVVVLVVDARDQITEQDA 277 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLS 163 + F+ + + + + K D L Sbjct: 278 HLADFVLQAGRALVLAVNKWDGLD 301 >gi|75676108|ref|YP_318529.1| GTP-binding protein Era [Nitrobacter winogradskyi Nb-255] gi|74420978|gb|ABA05177.1| GTP-binding protein Era [Nitrobacter winogradskyi Nb-255] Length = 303 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 24/135 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V ++NN + LVD Sbjct: 13 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIV------IENN-AQIILVDT 65 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG PK+ +D +W G + + L CV L+D R G+ + + + L Sbjct: 66 PGI---FVPKRRLDRAMVSTAWSG------AHDADLVCV--LLDARAGIDEEADAILTKL 114 Query: 146 DKKAVSYQIVLTKID 160 A +VL KID Sbjct: 115 AGVAHPKILVLNKID 129 >gi|26988167|ref|NP_743592.1| GTP-binding protein Era [Pseudomonas putida KT2440] gi|38257318|sp|Q88MY4|ERA_PSEPK RecName: Full=GTPase Era gi|24982901|gb|AAN67056.1|AE016334_5 GTP-binding protein Era [Pseudomonas putida KT2440] Length = 302 Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 14 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGDVQAIYVD 65 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG A N RY++ ++ L+ V ++I K D+D + Sbjct: 66 TPGMHKANDKALN---------RYMNRNASAALKDVDVVIFVVDRTKWTDEDQLVLERVQ 116 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ +++ K D++ E + ++L P A EV+P S+ + ++ L I Sbjct: 117 YVTGPLIIAVNKTDRMEEKA--ELIPHLQWLQEQLPNA--EVMPISAQQGHNLDALEAQI 172 >gi|330446942|ref|ZP_08310593.1| GTP-binding protein Era [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491133|dbj|GAA05090.1| GTP-binding protein Era [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 301 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 IA GR NVGKS+L+N LV +K L+ TS P T+H Sbjct: 10 IAIVGRPNVGKSTLLNRLVGQK-LSITSRKPQTTRH 44 >gi|325690931|gb|EGD32931.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK115] Length = 436 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|323491635|ref|ZP_08096814.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546] gi|323314211|gb|EGA67296.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546] Length = 494 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 12/138 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + K ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRD------RKYGQAKLGEHEFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V++ + + L+ V ++D R G+ D+ + S L K Sbjct: 56 DTGGID---GTEEGVETK--MAQQSLAAIDEADVVLFMVDGRAGLTAADEAIASHLRKIE 110 Query: 150 VSYQIVLTKIDKLSPTTA 167 +V+ K+D + A Sbjct: 111 KPSMLVVNKVDGIDADAA 128 >gi|320527305|ref|ZP_08028490.1| GTP-binding protein Era [Solobacterium moorei F0204] gi|320132329|gb|EFW24874.1| GTP-binding protein Era [Solobacterium moorei F0204] Length = 297 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 18/136 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPG--RTQHLNFFVPKDFSNLKNNLPAMALV 89 +A +GR N GKS+LIN L+ K +A S+ P R++ + ++ + + P + Sbjct: 6 VALAGRPNAGKSTLINSLIGEK-VAIVSSKPQTTRSEIRGIYTDENCQIIFTDTPG---I 61 Query: 90 DMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 P + +R K+ D G+ +YL++D + D+ V + + Sbjct: 62 HKPKFRLESRMNKEAADVIQGV-----------DLIYLVVDASTPYAKGDEFVLNMVKNT 110 Query: 149 AVSYQIVLTKIDKLSP 164 + +VL K+DK+ P Sbjct: 111 GLPVFLVLNKMDKMQP 126 >gi|317476897|ref|ZP_07936140.1| tRNA modification GTPase TrmE [Bacteroides eggerthii 1_2_48FAA] gi|316907072|gb|EFV28783.1| tRNA modification GTPase TrmE [Bacteroides eggerthii 1_2_48FAA] Length = 461 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 29/191 (15%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N+L+N + A S+ G T+ V +D N+ Sbjct: 214 VGNAIKNGVP-VAIIGETNAGKSTLLNVLLNEEK-AIVSDIHGTTRD----VIEDTVNIG 267 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V +ID + QI Q Sbjct: 268 G--ITFRFIDTAGI---RETNDTIESLG--IERTFQKLDQAEIVLWMIDATNAQTQITQL 320 Query: 141 VFSFLDK-KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT---SSVKR 196 L + +A +V K+D ++ + + PT P+ + + S+ KR Sbjct: 321 SSQLLPRCRAKQLILVYNKVDLVAN------------IQNDIPTNFPDDVKSIVISAKKR 368 Query: 197 KGIEVLRKAIL 207 + IE L++ ++ Sbjct: 369 EHIEELQQMLI 379 >gi|313623978|gb|EFR94077.1| ribosome biogenesis GTP-binding protein YlqF [Listeria innocua FSL J1-023] Length = 287 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|289434556|ref|YP_003464428.1| HSR1-related GTPase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170800|emb|CBH27342.1| HSR1-related GTPase family protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 287 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|149194988|ref|ZP_01872081.1| GTP-binding protein EngA [Caminibacter mediatlanticus TB-2] gi|149134909|gb|EDM23392.1| GTP-binding protein EngA [Caminibacter mediatlanticus TB-2] Length = 460 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N LV + A S+ G T P D + N + VD Sbjct: 200 VAIVGRVNVGKSSLLNALVGSER-AIVSDIDGTT-----IDPID-ETIYFNGYHITFVDT 252 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R+ K+++ + + + E + + L++D ++G+ ++D+ + + K + Sbjct: 253 AGI-RRRSKIKDIEKYALMRTEKVLEEADVAI--LVLDAQNGIVELDEKIGGLIQKHKNA 309 Query: 152 YQIVLTKIDKLSPTTAQ---ETLEKTKYL 177 IV K D+ + E ++ KYL Sbjct: 310 CIIVANKWDEAKMDYKKFESEVRDRFKYL 338 >gi|146281616|ref|YP_001171769.1| GTP-binding protein Era [Pseudomonas stutzeri A1501] gi|145569821|gb|ABP78927.1| GTP-binding protein Era [Pseudomonas stutzeri A1501] Length = 305 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 26/184 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 19 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGSVQAVYVD 70 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYL--SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG KN ++ + RY+ + S L+ V ++I + D+D + Sbjct: 71 TPGL------HKNGET---ALNRYMNRTAASALKDVDVVIFVVDRTRWTDEDQAVLERVQ 121 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ +++ K D++ E L ++L P A E++P S+ + +E L + + Sbjct: 122 YVTGPLIVAVNKTDRIEDKA--ELLPHLRWLAEQLPNA--EIVPISAQHGQNLETLEQLV 177 Query: 207 LETI 210 E + Sbjct: 178 AERL 181 >gi|57239269|ref|YP_180405.1| GTP-binding protein Era [Ehrlichia ruminantium str. Welgevonden] gi|58579232|ref|YP_197444.1| GTP-binding protein Era [Ehrlichia ruminantium str. Welgevonden] gi|81819234|sp|Q5HAY9|ERA_EHRRW RecName: Full=GTPase Era gi|57161348|emb|CAH58271.1| putative GTP-binding protein ERA [Ehrlichia ruminantium str. Welgevonden] gi|58417858|emb|CAI27062.1| GTP-binding protein Era homolog [Ehrlichia ruminantium str. Welgevonden] Length = 296 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 12/140 (8%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G +N GKS+L+N+LV +K A T +T + + N++ + +D P Sbjct: 12 AIVGATNAGKSTLVNVLVGQKVAAVTPKV--QTTRVRMHAVSNHENVQ-----LIFIDTP 64 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G +PK ++ + L+ + V +L+D ++ + Q + + + ++ Sbjct: 65 G---IFSPKTKLEKF--LVKHAWMSLKGIENVIVLVDVKNYLNQHLKKIIDRIKHSNLNA 119 Query: 153 QIVLTKIDKLSPTTAQETLE 172 +VL KID + + E +E Sbjct: 120 ILVLNKIDIVHQSIVSEVIE 139 >gi|16800379|ref|NP_470647.1| ribosomal biogenesis GTPase [Listeria innocua Clip11262] gi|16413784|emb|CAC96542.1| lin1311 [Listeria innocua Clip11262] gi|313619217|gb|EFR90980.1| ribosome biogenesis GTP-binding protein YlqF [Listeria innocua FSL S4-378] Length = 287 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|46907499|ref|YP_013888.1| ribosomal biogenesis GTPase [Listeria monocytogenes serotype 4b str. F2365] gi|47093920|ref|ZP_00231659.1| GTPase family protein [Listeria monocytogenes str. 4b H7858] gi|226223875|ref|YP_002757982.1| hypothetical protein Lm4b_01282 [Listeria monocytogenes Clip81459] gi|254824667|ref|ZP_05229668.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J1-194] gi|254852674|ref|ZP_05242022.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL R2-503] gi|254932411|ref|ZP_05265770.1| ribosomal biogenesis GTPase [Listeria monocytogenes HPB2262] gi|255520254|ref|ZP_05387491.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J1-175] gi|300765308|ref|ZP_07075292.1| GTPase family protein [Listeria monocytogenes FSL N1-017] gi|46880767|gb|AAT04065.1| GTPase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47017706|gb|EAL08500.1| GTPase family protein [Listeria monocytogenes str. 4b H7858] gi|225876337|emb|CAS05046.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605992|gb|EEW18600.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL R2-503] gi|293583968|gb|EFF96000.1| ribosomal biogenesis GTPase [Listeria monocytogenes HPB2262] gi|293593906|gb|EFG01667.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J1-194] gi|300513991|gb|EFK41054.1| GTPase family protein [Listeria monocytogenes FSL N1-017] gi|328468562|gb|EGF39562.1| GTPase YlqF [Listeria monocytogenes 1816] gi|328475116|gb|EGF45900.1| GTPase YlqF [Listeria monocytogenes 220] gi|332311717|gb|EGJ24812.1| Ribosome biogenesis GTPase A [Listeria monocytogenes str. Scott A] Length = 287 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|16803312|ref|NP_464797.1| ribosomal biogenesis GTPase [Listeria monocytogenes EGD-e] gi|47097415|ref|ZP_00234964.1| GTPase family protein [Listeria monocytogenes str. 1/2a F6854] gi|224501782|ref|ZP_03670089.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL R2-561] gi|254828635|ref|ZP_05233322.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL N3-165] gi|254829971|ref|ZP_05234626.1| ribosomal biogenesis GTPase [Listeria monocytogenes 10403S] gi|254898563|ref|ZP_05258487.1| ribosomal biogenesis GTPase [Listeria monocytogenes J0161] gi|254911947|ref|ZP_05261959.1| ribosomal biogenesis GTPase [Listeria monocytogenes J2818] gi|254936273|ref|ZP_05267970.1| ribosomal biogenesis GTPase [Listeria monocytogenes F6900] gi|255025708|ref|ZP_05297694.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J2-003] gi|284801657|ref|YP_003413522.1| ribosomal biogenesis GTPase [Listeria monocytogenes 08-5578] gi|284994799|ref|YP_003416567.1| ribosomal biogenesis GTPase [Listeria monocytogenes 08-5923] gi|16410688|emb|CAC99350.1| lmo1272 [Listeria monocytogenes EGD-e] gi|47014214|gb|EAL05198.1| GTPase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258601034|gb|EEW14359.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL N3-165] gi|258608862|gb|EEW21470.1| ribosomal biogenesis GTPase [Listeria monocytogenes F6900] gi|284057219|gb|ADB68160.1| ribosomal biogenesis GTPase [Listeria monocytogenes 08-5578] gi|284060266|gb|ADB71205.1| ribosomal biogenesis GTPase [Listeria monocytogenes 08-5923] gi|293589908|gb|EFF98242.1| ribosomal biogenesis GTPase [Listeria monocytogenes J2818] Length = 287 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|327470401|gb|EGF15857.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK330] Length = 436 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRAMRAIDRSDVVLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|327438167|dbj|BAK14532.1| predicted GTPase [Solibacillus silvestris StLB046] Length = 461 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 27/173 (15%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV ++N A ++ G T+ + +++ N++ +P + LVD G Sbjct: 230 GRPNVGKSSLLNSLV-QENKAIVTDIAGTTRD----IIEEYVNVR-GVP-LRLVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYL-LIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 R + V+ G R L+ L L+ +G + ++D F +A+ Y + Sbjct: 282 --RETEDIVERIG-----VERSREALKDADLILLVLNYGEELTEEDERLFETIQAMDYIV 334 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVKRKGIEVLRKAI 206 V+ K D +E+ L R + A V+ TS +K +G+ L +AI Sbjct: 335 VVNKTD----------IERKIDLNRVHELAGKHRVVTTSLLKEEGVIELEEAI 377 >gi|319638590|ref|ZP_07993352.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria mucosa C102] gi|317400339|gb|EFV80998.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria mucosa C102] Length = 313 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|307299177|ref|ZP_07578978.1| GTP-binding protein Obg/CgtA [Thermotogales bacterium mesG1.Ag.4.2] gi|306914973|gb|EFN45359.1| GTP-binding protein Obg/CgtA [Thermotogales bacterium mesG1.Ag.4.2] Length = 439 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 47/195 (24%), Positives = 76/195 (38%), Gaps = 38/195 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G NVGKS+LI+ + N R + N+ F+ L NL + + D Sbjct: 167 DVALVGFPNVGKSTLISTISN-----------ARPKIANYH----FTTLSPNLGVVMVSD 211 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC---VYLLIDCRHGVKQIDQDVFS---- 143 GY A P + G+ + + R RC V+LL + QD Sbjct: 212 SQGYIVADVPGLIKGAHEGIGLGHTFLRHIERCKTIVHLLDISESEERDFIQDYIDIRYE 271 Query: 144 -------FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 DK + +V K D ++ Q+ L+ K + E+IP S+ Sbjct: 272 LEFYKRELADKPEI---VVANKCDLITQAERQKRLQLFK------ESTGKEIIPVSAATH 322 Query: 197 KGIEVLRKAILETIN 211 +G + L++ I TI Sbjct: 323 EGTQALKEVIWRTIE 337 >gi|209526435|ref|ZP_03274962.1| GTP-binding protein HSR1-related [Arthrospira maxima CS-328] gi|209493070|gb|EDZ93398.1| GTP-binding protein HSR1-related [Arthrospira maxima CS-328] Length = 513 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 7/67 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP++A G++ VGK++ IN L N + L + G TQ K+F+ + + Sbjct: 395 PPKVAVIGKAGVGKTTTINNLFNAE-LKTSPTTVGTTQAQT----KEFTLSTGG--TLTV 447 Query: 89 VDMPGYG 95 +DMPGYG Sbjct: 448 IDMPGYG 454 >gi|254468967|ref|ZP_05082373.1| GTP-binding protein EngA [beta proteobacterium KB13] gi|207087777|gb|EDZ65060.1| GTP-binding protein EngA [beta proteobacterium KB13] Length = 466 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N L K A S G T+ V K ++ +NL A ++D Sbjct: 4 VAIVGRPNVGKSSLFNKLTKSKK-AIVSEFEGLTRDRQ--VGK---SVIDNL-AYEIIDS 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ KN ++ I+ + + ++D + G+ DQ + L KK Sbjct: 57 GGLNFS----KNNNALDTQILNQTNLAADEADLILFVVDYKSGLLPDDQVISKLLRKKDK 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D +S A+ K Y +VI TS GI+++ + I+ + Sbjct: 113 DICLVINKVDGVSDEIAKLDFSKLGY---------QQVICTSMSHNYGIDLIVELIVHKL 163 Query: 211 N 211 + Sbjct: 164 D 164 >gi|119871777|ref|YP_929784.1| small GTP-binding protein [Pyrobaculum islandicum DSM 4184] gi|119673185|gb|ABL87441.1| small GTP-binding protein [Pyrobaculum islandicum DSM 4184] Length = 570 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 38/179 (21%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A +G +NVGKSSL L RT+N PG T + ++++ + +VD+P Sbjct: 7 ALAGPANVGKSSLFYALTGIY--VRTANYPGTTVEIR------RASIRRGGVTIEVVDLP 58 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY-------LLIDCRHGVKQIDQDVFSFL 145 G ++P VD ER R + +++ H +K+ + Sbjct: 59 GIINIKSP---VDE---------DERVAFREAFEGTYDGVVVVAAPHAIKEAIELAKLVS 106 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 KK V + V +D P +E L K I P V+ TS+VKR GI L + Sbjct: 107 QKKPVIF--VYNMVDLAKPPWTEEELSK----ILGVP-----VVFTSAVKRVGINKLTE 154 >gi|148256031|ref|YP_001240616.1| GTP-binding protein Era [Bradyrhizobium sp. BTAi1] gi|189037293|sp|A5EKL6|ERA_BRASB RecName: Full=GTPase Era gi|146408204|gb|ABQ36710.1| GTP-binding protein (era) [Bradyrhizobium sp. BTAi1] Length = 308 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 30/138 (21%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V + S + LVD Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGTSQI-------ILVDT 70 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG +PK+ +D +W G + + L CV L+D + G +D + + + Sbjct: 71 PGI---FSPKRRLDRAMVTTAWSG------AHDADLVCV--LLDAKKG---LDDEAQAII 116 Query: 146 DK-KAVSYQ--IVLTKID 160 DK AV++Q +V+ K+D Sbjct: 117 DKAAAVAHQKILVVNKVD 134 >gi|313225869|emb|CBY21012.1| unnamed protein product [Oikopleura dioica] Length = 434 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 59/148 (39%), Gaps = 21/148 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL----VDM 91 G S +GKS+LIN L NL P V + S ++ + L VD Sbjct: 108 GESGLGKSTLINSLF-LTNLYEEREIPEAAIKAKQTVSIEASTVEIEERGVKLRLTVVDT 166 Query: 92 PGYGYARAPKKNVDSWGGLI----VRYLSERSTLR-----------CVYLLIDCRHGVKQ 136 PG+G A K D I RYL + S L C Y + C HG++ Sbjct: 167 PGFGDAIDNKNAFDPIIEYIDNQFERYLHDESGLNRRHIVDNRVHCCFYFINPCGHGLRP 226 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 ID + L + V+ ++ K D L+P Sbjct: 227 IDIEFMKTLQTR-VNLVPLIAKADMLTP 253 >gi|269956364|ref|YP_003326153.1| cytidylate kinase [Xylanimonas cellulosilytica DSM 15894] gi|269305045|gb|ACZ30595.1| cytidylate kinase [Xylanimonas cellulosilytica DSM 15894] Length = 725 Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats. Identities = 19/39 (48%), Positives = 23/39 (58%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLIN 47 ++A L V E G L GP +A GR NVGKSSL+N Sbjct: 444 EAAMAVLPKVSEHGELRPTGPRRVALVGRPNVGKSSLLN 482 >gi|255655269|ref|ZP_05400678.1| putative GTPase [Clostridium difficile QCD-23m63] gi|296451254|ref|ZP_06892994.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile NAP08] gi|296880394|ref|ZP_06904357.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile NAP07] gi|296259860|gb|EFH06715.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile NAP08] gi|296428635|gb|EFH14519.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile NAP07] Length = 298 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G NVGKSSLIN L RK+ +T + PG T+ K + LK NL L+D Sbjct: 136 IMIVGVPNVGKSSLINKLTGRKS-TQTGDKPGVTKG------KQWVRLKGNL---ELLDT 185 Query: 92 PGYGYARAPKKNV 104 PG + + + V Sbjct: 186 PGILWPKFEDQEV 198 >gi|146329627|ref|YP_001209600.1| GTP-binding protein Era [Dichelobacter nodosus VCS1703A] gi|146233097|gb|ABQ14075.1| GTP-binding protein Era [Dichelobacter nodosus VCS1703A] Length = 299 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 11/64 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKS+LIN L+ +K +A TS P T+ L + D M V Sbjct: 8 IAVVGRPNVGKSTLINHLLGQK-IAITSRKPQTTRQALLGIYSEDDVQ--------MVFV 58 Query: 90 DMPG 93 D PG Sbjct: 59 DTPG 62 >gi|15676637|ref|NP_273781.1| hypothetical protein NMB0739 [Neisseria meningitidis MC58] gi|7225967|gb|AAF41152.1| conserved hypothetical protein [Neisseria meningitidis MC58] Length = 505 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|332140433|ref|YP_004426171.1| GTP-binding protein Era [Alteromonas macleodii str. 'Deep ecotype'] gi|332141898|ref|YP_004427636.1| GTP-binding protein Era [Alteromonas macleodii str. 'Deep ecotype'] gi|327550455|gb|AEA97173.1| GTP-binding protein Era [Alteromonas macleodii str. 'Deep ecotype'] gi|327551920|gb|AEA98638.1| GTP-binding protein Era [Alteromonas macleodii str. 'Deep ecotype'] Length = 303 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 24/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H + D + A+ VD Sbjct: 11 VAIVGRPNVGKSTLLNRLLGQK-VSITSRKPQTTRHRILGIDTD-----GDYQAI-YVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVK--QIDQDVFSFLDK 147 P G + K+ ++ RY++ S+L V L++ G + D+ V S + + Sbjct: 64 P--GLHQDEKRAIN-------RYMNRAASSSLAEVGLVLFVVEGDRFNAEDEMVLSKVKQ 114 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +++ K+DK+ + + + L +P H ++P S+ + K ++ +R+ + Sbjct: 115 ANLPCYLIVNKMDKVE--DKENFMVHLQKLGEKHPFEH--IVPISAKQGKMVDGIRELVA 170 Query: 208 ETI 210 E++ Sbjct: 171 ESL 173 >gi|327462002|gb|EGF08331.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1057] Length = 436 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGMIIVVNKWD---------TLEKDNHTMKDW 309 >gi|229514086|ref|ZP_04403548.1| GTP-binding protein Era [Vibrio cholerae TMA 21] gi|229349267|gb|EEO14224.1| GTP-binding protein Era [Vibrio cholerae TMA 21] Length = 324 Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V + A+ VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETE-----GKYQAI-YVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG N L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHIEEKRAIN-----RLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + P +++P S+ + K +VL+K + E + Sbjct: 140 PVVLCVNKVDQVKDRN--EVMLHMLELSKRMPFV--DIVPISAKQGKNTDVLKKHVREHL 195 >gi|238650994|ref|YP_002916850.1| GTP-binding protein EngA [Rickettsia peacockii str. Rustic] gi|259645885|sp|C4K2K1|DER_RICPU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238625092|gb|ACR47798.1| GTP-binding protein EngA [Rickettsia peacockii str. Rustic] Length = 447 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 29/189 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I SGR N GKS+ IN L+N + L T G T+ + D+ KNN + L+D Sbjct: 181 QIVVSGRPNAGKSTFINALINDERLL-TGPEAGITRE---SIEIDWQ-YKNN--HIKLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTL------RCVYLLIDCRHGVKQIDQDVFSF 144 G ++++ LS T+ V L+ID +KQ D ++ S Sbjct: 234 TAGLRKKSTITESLEK--------LSASDTINSIKFANTVILMIDALAPLKQQDLNIASH 285 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPT---SSVKRKGI 199 + + S IV+ K D + + + E+ Y I T P+V IP S++ ++ I Sbjct: 286 VVNEGRSIVIVVNKWDLVKESEKEAFQEEFYYQIN---THLPQVKGIPVLFISAINKQNI 342 Query: 200 EVLRKAILE 208 E + A L+ Sbjct: 343 EQVLDACLK 351 >gi|227524465|ref|ZP_03954514.1| GTP-binding protein EngA [Lactobacillus hilgardii ATCC 8290] gi|227088335|gb|EEI23647.1| GTP-binding protein EngA [Lactobacillus hilgardii ATCC 8290] Length = 435 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 22/189 (11%) Query: 20 EIGLLPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF- 76 E G +P +I FS GR NVGKSSL+N ++ +N S+ G T+ + F Sbjct: 166 ETGNVPN---DDIRFSIIGRPNVGKSSLVNAILG-ENRVIVSDVAGTTRDA---IDTRFE 218 Query: 77 -SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 N+K +VD G +N + + ++R + + +I+ G++ Sbjct: 219 ADNIK-----FTMVDTAGIRKRGKVYENTERYS--VMRAMKAIDQSDVILFVINAEGGIR 271 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSS 193 + D+ V + + + V+ K D L T T + + LIRN A+ +I S+ Sbjct: 272 EQDKKVAGYAHEAGKAIITVVNKWDTLKKT--NHTQQDFETLIRNEFQYMAYSPIIFVSA 329 Query: 194 VKRKGIEVL 202 ++ IE L Sbjct: 330 KTKQRIEQL 338 >gi|225076246|ref|ZP_03719445.1| hypothetical protein NEIFLAOT_01284 [Neisseria flavescens NRL30031/H210] gi|224952370|gb|EEG33579.1| hypothetical protein NEIFLAOT_01284 [Neisseria flavescens NRL30031/H210] Length = 313 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|157412546|ref|YP_001483412.1| tRNA modification GTPase TrmE [Prochlorococcus marinus str. MIT 9215] gi|166991113|sp|A8G2J5|MNME_PROM2 RecName: Full=tRNA modification GTPase mnmE gi|157387121|gb|ABV49826.1| putative thiophen / furan oxidation protein [Prochlorococcus marinus str. MIT 9215] Length = 460 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 13/65 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAMAL 88 IA G++NVGKSSL+N+L +K A +N PG T+ +N + N++P M + Sbjct: 230 IALIGKTNVGKSSLLNLLA-KKEKAIVTNIPGTTRDVIEINLTI--------NDIP-MKI 279 Query: 89 VDMPG 93 +D G Sbjct: 280 IDTAG 284 >gi|114053343|ref|NP_001039375.1| large subunit GTPase 1 homolog [Bos taurus] gi|122138222|sp|Q2YDM7|LSG1_BOVIN RecName: Full=Large subunit GTPase 1 homolog gi|82571761|gb|AAI10151.1| Large subunit GTPase 1 homolog (S. cerevisiae) [Bos taurus] Length = 652 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 377 KDGQLTVGLVGYPNVGKSSTINTILGNKKVS-VSATPGHTKHFQTLYVE---------PG 426 Query: 86 MALVDMPG 93 + L D PG Sbjct: 427 LCLCDCPG 434 >gi|89075087|ref|ZP_01161528.1| GTP-binding protein Era [Photobacterium sp. SKA34] gi|90580326|ref|ZP_01236133.1| GTP-binding protein Era [Vibrio angustum S14] gi|89049174|gb|EAR54739.1| GTP-binding protein Era [Photobacterium sp. SKA34] gi|90438628|gb|EAS63812.1| GTP-binding protein Era [Vibrio angustum S14] Length = 301 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 IA GR NVGKS+L+N LV +K L+ TS P T+H Sbjct: 10 IAIVGRPNVGKSTLLNRLVGQK-LSITSRKPQTTRH 44 >gi|328770311|gb|EGF80353.1| hypothetical protein BATDEDRAFT_24850 [Batrachochytrium dendrobatidis JAM81] Length = 750 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 39/97 (40%), Gaps = 19/97 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF----------VPKDFSNLKN 81 I G NVGKSSLIN ++ R + TS PG T+H P LK Sbjct: 504 IGLVGHPNVGKSSLINGIMGR-TVVPTSKTPGHTKHFQTLHLSKRIRLCDCPGIVFPLKI 562 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 + PA L M R P ++ YL+ER Sbjct: 563 SKPAQILAGMYRIAQVREPCS--------VISYLAER 591 >gi|326692494|ref|ZP_08229499.1| GTP-binding protein Der [Leuconostoc argentinum KCTC 3773] Length = 437 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 18/153 (11%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQ---HLNFFVPKDFSNLKNNLPAM 86 I FS GR NVGKSS++N ++ + + S+ G T+ F P+ Sbjct: 176 IRFSIIGRPNVGKSSIVNAILGEERVI-VSDIEGTTRDAIDTRFVTPEG--------DEF 226 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VD G +N + + ++R L V +++D G+++ D+ V F Sbjct: 227 IMVDTAGMRKRGKVYENTEKYS--VMRALKAIDDSNVVLMVLDAEAGIREQDKHVAGFAH 284 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + + IV+ K D + T++ + LIR Sbjct: 285 EAGRAMIIVVNKWDAIEKD--DHTMKDFENLIR 315 >gi|320662211|gb|EFX29612.1| hypothetical protein ECO5905_10093 [Escherichia coli O55:H7 str. USDA 5905] Length = 290 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + +M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHSMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ Y L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA------LYRDILPKLDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTDAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|298373119|ref|ZP_06983109.1| ribosome-associated GTPase EngA [Bacteroidetes oral taxon 274 str. F0058] gi|298276023|gb|EFI17574.1| ribosome-associated GTPase EngA [Bacteroidetes oral taxon 274 str. F0058] Length = 438 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 19/136 (13%) Query: 30 PEIAFSGRSNVGKSSLINILV--NRK---NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++A GR N GKSSL+N + NR +A T+ T++ F DF Sbjct: 177 PKLAVVGRPNAGKSSLVNAFLDDNRNIVTEIAGTTRDSIYTRYNKF--GYDF-------- 226 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++V+ + ++R + L+ID G++ D ++FS Sbjct: 227 --YLVDTAGIRKKAKVNEDVEYYS--VIRAIRAIENSDVCVLMIDAERGIESQDLNIFSL 282 Query: 145 LDKKAVSYQIVLTKID 160 + K + + K D Sbjct: 283 IQKNKKGLVVCVNKWD 298 >gi|302911056|ref|XP_003050409.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256731346|gb|EEU44696.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 667 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Query: 13 IFLRGVP-EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 IFLR P E G K ++ G NVGKSS IN L+ K ++ S+ PG+T+H Sbjct: 329 IFLRHAPTEEGTDRKL---QVGLVGYPNVGKSSTINALIGAKKVS-VSSTPGKTKHFQ 382 >gi|258542805|ref|YP_003188238.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-01] gi|256633883|dbj|BAH99858.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-01] gi|256636942|dbj|BAI02911.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-03] gi|256639995|dbj|BAI05957.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-07] gi|256643051|dbj|BAI09006.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-22] gi|256646106|dbj|BAI12054.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-26] gi|256649159|dbj|BAI15100.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-32] gi|256652146|dbj|BAI18080.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655203|dbj|BAI21130.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-12] Length = 472 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 LP P + +GR NVGKS+L N LV R+ A ++ PG T+ Sbjct: 7 LPTGDMPVVVIAGRPNVGKSTLFNRLVGRRQ-ALVADTPGVTR 48 >gi|297559956|ref|YP_003678930.1| ribosome-associated GTPase EngA [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844404|gb|ADH66424.1| ribosome-associated GTPase EngA [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 478 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 14/132 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKSSL+N ++ R+ A + PG T+ + ++ N + LV Sbjct: 23 PVVAVVGRPNVGKSSLVNRIIGRRE-AVVEDVPGVTRDRVAY-DAEWQNTR-----FTLV 75 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G+ + +V ++ R T + ++D GV D V L Sbjct: 76 DTGGW------ETSVSGLAAMVARQAEYAAQTADVILFVVDATVGVTDADAAVTRVLRST 129 Query: 149 AVSYQIVLTKID 160 + K+D Sbjct: 130 KRPVVLAANKVD 141 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 16/28 (57%), Positives = 18/28 (64%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNL 55 GPP IA GR NVGKSSL+N L + Sbjct: 196 GPPRIALLGRPNVGKSSLLNRLAGEDRV 223 >gi|170085583|ref|XP_001874015.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651567|gb|EDR15807.1| predicted protein [Laccaria bicolor S238N-H82] Length = 652 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 I G+ NVGKSSL+N L + + R S PG+T+H Sbjct: 381 IGLIGQPNVGKSSLLNALFGARRV-RASKTPGKTKHFQ 417 >gi|218781934|ref|YP_002433252.1| GTP-binding protein EngA [Desulfatibacillum alkenivorans AK-01] gi|226741134|sp|B8FM51|DER_DESAA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218763318|gb|ACL05784.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01] Length = 445 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 22/136 (16%) Query: 17 GVPE-----IGLLPKAGPP------EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 GVP + +LPKA P I GR N GKSSLIN ++ ++ L S+ PG T Sbjct: 150 GVPTFLDMVVKVLPKASPKLEEDMISIGVVGRPNAGKSSLINKILGQERLL-VSDTPGTT 208 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + D N P + L+D G K ++ + IVR L Sbjct: 209 RD-----AVDTVCQVNGKPYL-LLDTAGIRRKGKVKHKLEKFS--IVRALKGLERCDVAL 260 Query: 126 LLIDCRHGVKQIDQDV 141 +++D G+ DQDV Sbjct: 261 VMLDATEGI--TDQDV 274 >gi|167035366|ref|YP_001670597.1| GTP-binding protein Era [Pseudomonas putida GB-1] gi|189037661|sp|B0KV26|ERA_PSEPG RecName: Full=GTPase Era gi|166861854|gb|ABZ00262.1| GTP-binding protein Era [Pseudomonas putida GB-1] Length = 300 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 12 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGDVQAIYVD 63 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG A N RY++ ++ L+ V ++I K D+D + Sbjct: 64 TPGMHKANDKALN---------RYMNRNASAALKDVDVVIFVVDRTKWTDEDQLVLERVQ 114 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ +++ K D++ E + ++L P A EV+P S+ + ++ L I Sbjct: 115 YVTGPLIIAVNKTDRMEEKA--ELIPHLQWLQEQLPNA--EVMPISAQQGHNLDALEAQI 170 >gi|83590169|ref|YP_430178.1| small GTP-binding protein domain-containing protein [Moorella thermoacetica ATCC 39073] gi|123524458|sp|Q2RIV4|DER_MOOTA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|83573083|gb|ABC19635.1| Small GTP-binding protein domain [Moorella thermoacetica ATCC 39073] Length = 438 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 11/131 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 ++A GR NVGKSSL+N L+ + + S+ PG T+ ++ ++ + L+ Sbjct: 177 KVAIVGRPNVGKSSLVNRLLGEERVI-VSDLPGTTRDAVDTYI-------RRGEREYILI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R + V + ++R L V +++D GV + D+ + + +K Sbjct: 229 DTA--GMRRKSRITVPTERYSVLRALRAVERADVVLVILDGTEGVTEQDKKIAGYGHEKG 286 Query: 150 VSYQIVLTKID 160 + IV+ K D Sbjct: 287 KATIIVVNKWD 297 >gi|15897212|ref|NP_341817.1| GTP-binding protein (hflX) [Sulfolobus solfataricus P2] gi|284174458|ref|ZP_06388427.1| GTP-binding protein (hflX) [Sulfolobus solfataricus 98/2] gi|13813407|gb|AAK40607.1| GTP-binding protein (hflX) [Sulfolobus solfataricus P2] gi|261601880|gb|ACX91483.1| GTP-binding proten HflX [Sulfolobus solfataricus 98/2] Length = 356 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 30/190 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFV---PKDFSNLKNNLP 84 P I G +N GK+SL N L G TQ ++ F PK ++ NN Sbjct: 180 PSIGIVGYTNSGKTSLFNSLT------------GLTQKVDTKLFTTMSPKRYAIPINNRK 227 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG---VKQIDQDV 141 M LVD G+ P + VD++ LSE + L+ID + + Q Sbjct: 228 IM-LVDTVGFIRG-IPPQIVDAF----FVTLSEAKYSDALILVIDSTFSENLLIETLQSS 281 Query: 142 FSFLDKKAVSYQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 F L + VS + + L KIDK++ ++ L+ + L + + +VIP S++KR Sbjct: 282 FEILREIGVSGKPILVTLNKIDKINGDLYKK-LDLVEKLSKELYSPIFDVIPISALKRTN 340 Query: 199 IEVLRKAILE 208 +E+LR I + Sbjct: 341 LELLRDKIYQ 350 >gi|15611840|ref|NP_223491.1| GTP-binding protein EngA [Helicobacter pylori J99] gi|8134435|sp|Q9ZL09|DER_HELPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|4155327|gb|AAD06341.1| putative [Helicobacter pylori J99] Length = 462 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 202 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 254 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 255 TAGIRH-RGKILGIEKYALDRTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 311 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 312 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 366 >gi|315282092|ref|ZP_07870580.1| ribosome biogenesis GTP-binding protein YlqF [Listeria marthii FSL S4-120] gi|313614262|gb|EFR87918.1| ribosome biogenesis GTP-binding protein YlqF [Listeria marthii FSL S4-120] Length = 288 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|281200314|gb|EFA74535.1| hypothetical protein PPL_00033 [Polysphondylium pallidum PN500] Length = 627 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + SG NVGKSS IN+L K +A + PG+T+++ + D + L+D Sbjct: 321 VGLSGYPNVGKSSTINVLYGEKKVA-VAPTPGKTKYVQTIIVDD---------DVVLLDC 370 Query: 92 PG 93 PG Sbjct: 371 PG 372 >gi|255022620|ref|ZP_05294606.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J1-208] Length = 287 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|224499056|ref|ZP_03667405.1| ribosomal biogenesis GTPase [Listeria monocytogenes Finland 1988] Length = 287 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|203284541|ref|YP_002222281.1| conserved hypothetical GTP-binding protein [Borrelia duttonii Ly] gi|201083984|gb|ACH93575.1| conserved hypothetical GTP-binding protein [Borrelia duttonii Ly] Length = 291 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 12/59 (20%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVDMPG 93 G NVGKSS+IN+LV +K+ + +N PG T+++ V +D + L DMPG Sbjct: 134 GVPNVGKSSIINLLVGKKSTS-VANKPGHTKNIQILKVNEDIN----------LFDMPG 181 >gi|139439670|ref|ZP_01773083.1| Hypothetical protein COLAER_02111 [Collinsella aerofaciens ATCC 25986] gi|133775011|gb|EBA38831.1| Hypothetical protein COLAER_02111 [Collinsella aerofaciens ATCC 25986] Length = 444 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 9/143 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKSSL N ++ + + SN G T+ V ++ N +VD Sbjct: 182 VAIIGRPNAGKSSLFNRILG-ADRSIVSNIAGTTRDAIDTV------VERNGKHYRMVDT 234 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G +N++ + +VR L L++D GV + DQ V ++ + Sbjct: 235 AGIRKKSTVYENIEYYS--MVRGLRAIDRADVALLVVDASVGVTEQDQKVMGLAIERGCA 292 Query: 152 YQIVLTKIDKLSPTTAQETLEKT 174 ++L K D L +E +T Sbjct: 293 IVVLLNKWDLLDDDRKREACMET 315 >gi|160900447|ref|YP_001566029.1| GTP-binding protein EngA [Delftia acidovorans SPH-1] gi|238687162|sp|A9BMU9|DER_DELAS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|160366031|gb|ABX37644.1| small GTP-binding protein [Delftia acidovorans SPH-1] Length = 448 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 15/183 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + +GR NVGKS+LIN + + L + PG T+ VP + + K L A Sbjct: 181 PIRLTVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDA-ISVPFERAGQKFELIDTAG 238 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 + G + K +V V+ L + V LLID GV D + ++ + Sbjct: 239 LRRKGRVFEAIEKFSV-------VKTLQAIESANVVLLLIDATQGVTDQDAHIAGYVLES 291 Query: 149 AVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K D + Q E +T+ + H S+ KR+G+ L +I Sbjct: 292 GRAVVLAVNKWDAVDDYQRQMLERSIETRLSFLKFAPMH----FISAEKRQGLGPLWNSI 347 Query: 207 LET 209 ++ Sbjct: 348 IQA 350 >gi|157828884|ref|YP_001495126.1| GTP-binding protein EngA [Rickettsia rickettsii str. 'Sheila Smith'] gi|166225852|sp|A8GT93|DER_RICRS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157801365|gb|ABV76618.1| GTP-binding protein EngA [Rickettsia rickettsii str. 'Sheila Smith'] Length = 447 Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 17/183 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I SGR N GKS+ IN L+N + L T G T+ + D+ KNN + L+D Sbjct: 181 QIVVSGRPNAGKSTFINALINDERLL-TGPEAGITRE---SIEIDWQ-YKNN--HIKLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++++ ++ V L+ID +KQ D ++ S + + Sbjct: 234 TAGLRKKSTITESLEKLSA--SDTINSIKLANTVILMIDALAPLKQQDLNIASHVVNEGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPT---SSVKRKGIEVLRKA 205 S IV+ K D + + + E+ Y I T P+V IP S++ ++ IE + A Sbjct: 292 SIVIVVNKWDLVKESEKEAFQEEFYYQIN---THLPQVKGIPVLFISAINKQNIEQVLDA 348 Query: 206 ILE 208 L+ Sbjct: 349 CLK 351 >gi|332358244|gb|EGJ36072.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK355] Length = 436 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|307637526|gb|ADN79976.1| GTP-binding protein [Helicobacter pylori 908] gi|325996115|gb|ADZ51520.1| GTP-binding protein [Helicobacter pylori 2018] gi|325997711|gb|ADZ49919.1| GTP-binding protein [Helicobacter pylori 2017] Length = 462 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 202 QVGIIGRVNVGKSSLLNALT-KKERSLVSSMAGTT-----IDPIDETILIGD-QKICFVD 254 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 255 TAGIRH-RGKILGIEKYALDRTKKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 311 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 312 GIILILNKWDIRYAPYEEIMAALKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 366 >gi|294788862|ref|ZP_06754103.1| ribosome biogenesis GTP-binding protein YlqF [Simonsiella muelleri ATCC 29453] gi|294483344|gb|EFG31030.1| ribosome biogenesis GTP-binding protein YlqF [Simonsiella muelleri ATCC 29453] Length = 311 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|262278197|ref|ZP_06055982.1| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase [Acinetobacter calcoaceticus RUH2202] gi|262258548|gb|EEY77281.1| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase [Acinetobacter calcoaceticus RUH2202] Length = 342 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 20/183 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + + A+ VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSREKMQAV-YVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD--VFSFLDKKA 149 PG KK V + ++ R + S LR V L++ K D V L Sbjct: 95 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDAYKWTPNDDLVLEKLKNAE 147 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 148 MPVILVINKADTFEDKRDILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEKY 203 Query: 210 INY 212 + Y Sbjct: 204 LPY 206 >gi|260771392|ref|ZP_05880317.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972] gi|260613518|gb|EEX38712.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972] gi|315180972|gb|ADT87886.1| GTP-binding protein [Vibrio furnissii NCTC 11218] Length = 495 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 12/138 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + K ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTR------DRKYGQAKLGEHEFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V++ + + L+ V ++D R G+ D+ + + L + Sbjct: 56 DTGGID---GSEEGVETK--MAAQSLAAIDEADVVLFMVDGRAGLTVADEAIANHLRRVE 110 Query: 150 VSYQIVLTKIDKLSPTTA 167 + +V+ K+D + TA Sbjct: 111 KNAILVVNKVDGIDAETA 128 >gi|237736602|ref|ZP_04567083.1| ferrous iron transporter B [Fusobacterium mortiferum ATCC 9817] gi|229420464|gb|EEO35511.1| ferrous iron transporter B [Fusobacterium mortiferum ATCC 9817] Length = 732 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 9/69 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +AF+G NVGKS+LIN + K + N PG T V K + + LVD+ Sbjct: 4 LAFTGNPNVGKSALINAIAGSK--LKVGNWPGVT------VEKKEATFTYKGEEIELVDL 55 Query: 92 PGYGYARAP 100 PG Y+ +P Sbjct: 56 PGV-YSLSP 63 >gi|217034119|ref|ZP_03439539.1| hypothetical protein HP9810_868g12 [Helicobacter pylori 98-10] gi|216943403|gb|EEC22859.1| hypothetical protein HP9810_868g12 [Helicobacter pylori 98-10] Length = 461 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSMAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + V L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--VLLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI S +K + I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITASCLKMRHIDEIKHKIIE 365 >gi|197107124|pdb|2QTF|A Chain A, Crystal Structure Of A Gtp-Binding Protein From The Hyperthermophilic Archaeon Sulfolobus Solfataricus gi|197107125|pdb|2QTH|A Chain A, Crystal Structure Of A Gtp-Binding Protein From The Hyperthermophilic Archaeon Sulfolobus Solfataricus In Complex With Gdp gi|296863533|pdb|3KXI|A Chain A, Crystal Structure Of Ssgbp And Gdp Complex Length = 364 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 30/188 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFV---PKDFSNLKNNLP 84 P I G +N GK+SL N L G TQ ++ F PK ++ NN Sbjct: 180 PSIGIVGYTNSGKTSLFNSLT------------GLTQKVDTKLFTTMSPKRYAIPINNRK 227 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG---VKQIDQDV 141 M LVD G+ P + VD++ LSE + L+ID + + Q Sbjct: 228 IM-LVDTVGFIRG-IPPQIVDAF----FVTLSEAKYSDALILVIDSTFSENLLIETLQSS 281 Query: 142 FSFLDKKAVSYQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 F L + VS + + L KIDK++ ++ L+ + L + + +VIP S++KR Sbjct: 282 FEILREIGVSGKPILVTLNKIDKINGDLYKK-LDLVEKLSKELYSPIFDVIPISALKRTN 340 Query: 199 IEVLRKAI 206 +E+LR I Sbjct: 341 LELLRDKI 348 >gi|194745144|ref|XP_001955052.1| GF16439 [Drosophila ananassae] gi|190628089|gb|EDV43613.1| GF16439 [Drosophila ananassae] Length = 679 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 31/194 (15%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P L K PP + G + GK++L++ L R A G TQH+ F Sbjct: 135 PASAELLKPRPPVVTVMGHVDHGKTTLLDSL--RGADVAAGEAGGITQHIGAFT----VT 188 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 L+N + +D PG+ A + +IV L++ GV Sbjct: 189 LENG-ERVTFLDTPGHAAFSAMRARGAVATDIIV-------------LVVAAEDGVMAQT 234 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE------VIPTS 192 ++V + V + L KIDK + +EK+K + A E VIP S Sbjct: 235 REVIQLAKEAQVPIIVALNKIDK-----PEANIEKSKQELTQMGLALEEHGGDVQVIPIS 289 Query: 193 SVKRKGIEVLRKAI 206 ++K +++L +A+ Sbjct: 290 ALKGTNLQLLAEAV 303 >gi|169832185|ref|YP_001718167.1| GTP-binding protein Era [Candidatus Desulforudis audaxviator MP104C] gi|169639029|gb|ACA60535.1| GTP-binding protein Era [Candidatus Desulforudis audaxviator MP104C] Length = 308 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 12/70 (17%) Query: 29 PPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 PPE + GR NVGKS+L+N LV RK +A S+ P T+H + + L + Sbjct: 11 PPEYRSGFVTIIGRPNVGKSTLLNSLVGRK-VAIISDKPQTTRH------RIRAVLTRDD 63 Query: 84 PAMALVDMPG 93 + VD PG Sbjct: 64 AQVVFVDTPG 73 >gi|126698855|ref|YP_001087752.1| putative GTPase [Clostridium difficile 630] gi|115250292|emb|CAJ68114.1| putative GTPase, MG442 type [Clostridium difficile] Length = 289 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G NVGKSSLIN L RK+ +T + PG T+ K + LK NL L+D Sbjct: 127 IMIVGVPNVGKSSLINKLTGRKS-TQTGDKPGVTKG------KQWVRLKGNL---ELLDT 176 Query: 92 PGYGYARAPKKNV 104 PG + + + V Sbjct: 177 PGILWPKFEDQEV 189 >gi|148259245|ref|YP_001233372.1| translation initiation factor IF-2 [Acidiphilium cryptum JF-5] gi|326402398|ref|YP_004282479.1| translation initiation factor IF-2 [Acidiphilium multivorum AIU301] gi|166226242|sp|A5FV21|IF2_ACICJ RecName: Full=Translation initiation factor IF-2 gi|146400926|gb|ABQ29453.1| bacterial translation initiation factor 2 (bIF-2) [Acidiphilium cryptum JF-5] gi|325049259|dbj|BAJ79597.1| translation initiation factor IF-2 [Acidiphilium multivorum AIU301] Length = 887 Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 25/185 (13%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K PP + G + GK+SL++ L + AR A G TQH+ + S K Sbjct: 385 KVRPPVVTIMGHVDHGKTSLLDALRSTDVAAR--EAGGITQHIGAYQVTLESGAK----- 437 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M +D PG+ A + S +++ L++ GV + Q V + Sbjct: 438 MTFIDTPGHEAFTAMRARGASVTDIVI-------------LVVAADDGV--MPQTVEAIR 482 Query: 146 DKKAVSYQIV--LTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIPTSSVKRKGIEVL 202 KA + I+ + KID+ + E +Y I + + S++KR+G++ L Sbjct: 483 HAKAANVPIIVAINKIDRPDANPNRVRSELLQYDIAVEAMGGETQDVEVSALKRQGLDAL 542 Query: 203 RKAIL 207 ++AIL Sbjct: 543 QEAIL 547 >gi|325144222|gb|EGC66529.1| GTPase family protein [Neisseria meningitidis M01-240013] Length = 313 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|304382194|ref|ZP_07364702.1| ribosome-associated GTPase EngA [Prevotella marshii DSM 16973] gi|304336659|gb|EFM02887.1| ribosome-associated GTPase EngA [Prevotella marshii DSM 16973] Length = 437 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 19/138 (13%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 G P A GR N GKSS+IN + +A T+ T++ F DF Sbjct: 174 GIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGF--DFY----- 226 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 LVD G ++++ + ++R + L++D G++ D ++F Sbjct: 227 -----LVDTAGIRRKNKVTEDLEFYS--VMRSIRAIENSDVCILMLDATRGIEAQDMNIF 279 Query: 143 SFLDKKAVSYQIVLTKID 160 + K + S +V+ K D Sbjct: 280 QLIQKNSKSLVVVVNKWD 297 >gi|228994203|ref|ZP_04154103.1| tRNA modification GTPase mnmE [Bacillus pseudomycoides DSM 12442] gi|229000273|ref|ZP_04159842.1| tRNA modification GTPase mnmE [Bacillus mycoides Rock3-17] gi|229007799|ref|ZP_04165384.1| tRNA modification GTPase mnmE [Bacillus mycoides Rock1-4] gi|228753459|gb|EEM02912.1| tRNA modification GTPase mnmE [Bacillus mycoides Rock1-4] gi|228759605|gb|EEM08582.1| tRNA modification GTPase mnmE [Bacillus mycoides Rock3-17] gi|228765655|gb|EEM14309.1| tRNA modification GTPase mnmE [Bacillus pseudomycoides DSM 12442] Length = 458 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV K A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEKK-AIVTDIAGTTRD----VIEEYVNVR-GVP-LKLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R V ++++ + D+D+F + K + Sbjct: 277 GI---RETEDIVERIG--VERSKEMMGQADLVLIVVNYSEALTNEDEDLFRAVRGK--DF 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K D Q +++ L +I TS ++ KG++ L KAI Sbjct: 330 IVIVNKTD----LPKQIDMKRVTEL-----AGKNRMITTSLIEEKGVDELEKAI 374 >gi|261380450|ref|ZP_05985023.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria subflava NJ9703] gi|284796692|gb|EFC52039.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria subflava NJ9703] Length = 313 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|203288075|ref|YP_002223090.1| conserved hypothetical GTP-binding protein [Borrelia recurrentis A1] gi|201085295|gb|ACH94869.1| conserved hypothetical GTP-binding protein [Borrelia recurrentis A1] Length = 291 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 12/59 (20%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVDMPG 93 G NVGKSS+IN+LV +K+ + +N PG T+++ V +D + L DMPG Sbjct: 134 GVPNVGKSSIINLLVGKKSTS-VANKPGHTKNIQILKVNEDIN----------LFDMPG 181 >gi|161869681|ref|YP_001598848.1| ribosomal biogenesis GTPase [Neisseria meningitidis 053442] gi|161595234|gb|ABX72894.1| conserved hypothetical protein [Neisseria meningitidis 053442] gi|325127836|gb|EGC50743.1| GTPase family protein [Neisseria meningitidis N1568] gi|325136036|gb|EGC58646.1| GTPase family protein [Neisseria meningitidis M0579] gi|325140105|gb|EGC62634.1| GTPase family protein [Neisseria meningitidis CU385] Length = 313 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|150390776|ref|YP_001320825.1| GTP-binding protein Era [Alkaliphilus metalliredigens QYMF] gi|189037249|sp|A6TSJ8|ERA_ALKMQ RecName: Full=GTPase Era gi|149950638|gb|ABR49166.1| GTP-binding protein Era [Alkaliphilus metalliredigens QYMF] Length = 295 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 33/184 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 + GR NVGKS+L+N ++ K +A S+ P T++ + + +DF + + Sbjct: 8 VTIIGRPNVGKSTLMNQIIGEK-IAIMSDKPQTTRNKIQSVYSQEDFQ--------IVFL 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLD 146 D PG PK + G +V+ R TL+ V L+D + D+ + L Sbjct: 59 DTPG---IHKPKHKL---GEYMVKV--ARDTLKEVDVVLFLVDEGQKIGPGDRFIMEQLK 110 Query: 147 KKAVSYQIVLTKIDKLSPTTAQET---LEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +++ KIDK++ E E+T R +IP S+++ I+ L Sbjct: 111 DIKTPMFLIINKIDKMNQEILNEVCGLFEETGLFQR--------IIPISALEGANIDTLI 162 Query: 204 KAIL 207 K I+ Sbjct: 163 KQIV 166 >gi|115438174|ref|XP_001217998.1| hypothetical protein ATEG_09376 [Aspergillus terreus NIH2624] gi|114188813|gb|EAU30513.1| hypothetical protein ATEG_09376 [Aspergillus terreus NIH2624] Length = 432 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 20/92 (21%) Query: 13 IFLRGVPEIGLLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +FL P+ LP + P+ I G NVGKSS IN L+ K ++ S PG+ Sbjct: 251 LFLSNTPDT--LPDSDNPDAPTKQKTIIGLVGYPNVGKSSTINALLGAKKVS-VSATPGK 307 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGY 96 T+H P + L D PG + Sbjct: 308 TKHFQTLYLS---------PEIMLCDCPGLVF 330 >gi|110643162|ref|YP_670892.1| hypothetical protein ECP_3008 [Escherichia coli 536] gi|191171808|ref|ZP_03033354.1| putative GTPase [Escherichia coli F11] gi|110344754|gb|ABG70991.1| hypothetical protein ECP_3008 [Escherichia coli 536] gi|190907843|gb|EDV67436.1| putative GTPase [Escherichia coli F11] Length = 290 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 73/186 (39%), Gaps = 30/186 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHNMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 144 HQQVLFVVTQADKTEPCHEWDVAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSA-- 200 Query: 196 RKGIEV 201 R G E+ Sbjct: 201 RTGWEL 206 >gi|328946827|gb|EGG40964.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1087] Length = 436 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGMIIVVNKWD---------TLEKDNHTMKDW 309 >gi|254804620|ref|YP_003082841.1| putative GTPase [Neisseria meningitidis alpha14] gi|254668162|emb|CBA04826.1| putative GTPase [Neisseria meningitidis alpha14] Length = 313 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|217964585|ref|YP_002350263.1| GTPase family protein [Listeria monocytogenes HCC23] gi|290894531|ref|ZP_06557481.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J2-071] gi|217333855|gb|ACK39649.1| GTPase family protein [Listeria monocytogenes HCC23] gi|290555912|gb|EFD89476.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J2-071] gi|307570851|emb|CAR84030.1| GTPase family protein [Listeria monocytogenes L99] Length = 287 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|23099252|ref|NP_692718.1| GTP-binding protein EngA [Oceanobacillus iheyensis HTE831] gi|37999696|sp|Q8EQA8|DER_OCEIH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|22777481|dbj|BAC13753.1| GTP binding protein [Oceanobacillus iheyensis HTE831] Length = 436 Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 17/185 (9%) Query: 21 IGLLPKAGPPE-----IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +G P E I FS GR NVGKSSL+N L+N + S G T+ Sbjct: 160 VGHFPNESEEEKDEDTIYFSLIGRPNVGKSSLVNALLNEDRVI-VSEIEGTTRD------ 212 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L + ++D G ++ + + L ERS V +LID G Sbjct: 213 AIDTKLHRDDQDFVIIDTAGMRKRGKVYESTEKYSVLRALRAIERSD--VVLVLIDAETG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +++ D+ + + + IV+ K D + S A + EK Y P V ++ Sbjct: 271 IREQDKRIAGYAHDAGRAIVIVVNKWDTVDSNEKAMKEFEKNIRAHFQYLDYAPVVFLSA 330 Query: 193 SVKRK 197 K++ Sbjct: 331 KTKKR 335 >gi|300853996|ref|YP_003778980.1| putative ras-like GTP-binding protein [Clostridium ljungdahlii DSM 13528] gi|300434111|gb|ADK13878.1| predicted ras-like GTP-binding protein [Clostridium ljungdahlii DSM 13528] Length = 293 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 27/176 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 I GR NVGKS+L+N ++ K L+ S P T++ DF + V Sbjct: 7 ITIIGRPNVGKSTLLNNIMGEK-LSIVSCRPQTTRNSIQTILTEDDFQ--------LVFV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG PK + G +V+ + + V L + D + L K Sbjct: 58 DTPG---IHKPKHKL---GDYMVKAAEDSIKDVDLVLFLTTPELEPGKGDLYILEELKKC 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVL 202 V +VL KID+ ETL +NY EVIP S++K+K +E L Sbjct: 112 NVPVFLVLNKIDENPEQRVAETL-------KNYSAIFNFVEVIPISALKKKNVEEL 160 >gi|296491287|gb|DAA33350.1| large subunit GTPase 1 homolog [Bos taurus] Length = 652 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 377 KDGQLTVGLVGYPNVGKSSTINTILGNKKVS-VSATPGHTKHFQTLYVE---------PG 426 Query: 86 MALVDMPG 93 + L D PG Sbjct: 427 LCLCDCPG 434 >gi|116872705|ref|YP_849486.1| ribosomal biogenesis GTPase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741583|emb|CAK20707.1| GTPase family protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 287 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|332970332|gb|EGK09324.1| ribosome biogenesis GTP-binding protein YlqF [Kingella kingae ATCC 23330] Length = 312 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|218767861|ref|YP_002342373.1| ribosomal biogenesis GTPase [Neisseria meningitidis Z2491] gi|121051869|emb|CAM08175.1| hypothetical protein NMA0950 [Neisseria meningitidis Z2491] gi|319410108|emb|CBY90444.1| putative GTP-binding protein [Neisseria meningitidis WUE 2594] gi|325133746|gb|EGC56402.1| GTPase family protein [Neisseria meningitidis M13399] gi|325206417|gb|ADZ01870.1| GTPase family protein [Neisseria meningitidis M04-240196] Length = 313 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|321479239|gb|EFX90195.1| hypothetical protein DAPPUDRAFT_205517 [Daphnia pulex] Length = 829 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 27/145 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKD-----------FS 77 P + G + GK+ +++ L R+ + A G TQ + VP + F Sbjct: 241 PVVCVLGHVDTGKTKILDKL--RRTHVQDGEAGGITQQIGATNVPIEAIREQSKMVIGFQ 298 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++K +P + ++D PG+ +S+ L R S L++D HG++ Sbjct: 299 DMKLKIPGLLIIDTPGH----------ESFSNLRSRG---SSLCDIAILVVDIMHGLEPQ 345 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL 162 + + L K + + L KID+L Sbjct: 346 TIESLNLLKAKKTPFVVALNKIDRL 370 >gi|322386141|ref|ZP_08059775.1| ribosome-associated GTPase EngA [Streptococcus cristatus ATCC 51100] gi|321269833|gb|EFX52759.1| ribosome-associated GTPase EngA [Streptococcus cristatus ATCC 51100] Length = 436 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIVIVVNKWD---------TLEKDNHTMKDW 309 >gi|255660441|ref|ZP_05405850.1| tRNA modification GTPase TrmE [Mycoplasma genitalium G37] Length = 388 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P +IA G +NVGKSSL+N L+N+ A SN G T+ + V DF+ Sbjct: 163 PFKIAIIGETNVGKSSLLNALLNQDK-AIVSNIKGSTRDV---VEGDFN 207 >gi|90412087|ref|ZP_01220094.1| GTP-binding protein Era [Photobacterium profundum 3TCK] gi|90327065|gb|EAS43444.1| GTP-binding protein Era [Photobacterium profundum 3TCK] Length = 301 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 IA GR NVGKS+L+N LV +K L+ TS P T+H Sbjct: 10 IAIVGRPNVGKSTLLNRLVGQK-LSITSRKPQTTRH 44 >gi|58617284|ref|YP_196483.1| GTP-binding protein Era [Ehrlichia ruminantium str. Gardel] gi|81311297|sp|Q5FFN4|ERA_EHRRG RecName: Full=GTPase Era gi|58416896|emb|CAI28009.1| GTP-binding protein Era homolog [Ehrlichia ruminantium str. Gardel] Length = 296 Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 12/140 (8%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G +N GKS+L+N+LV +K A T +T + + N++ + +D P Sbjct: 12 AIVGTTNAGKSTLVNVLVGQKVAAVTPKV--QTTRVRMHAVSNHENVQ-----LIFIDTP 64 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G +PK ++ + L+ + V +L+D ++ + Q + + + ++ Sbjct: 65 G---IFSPKTKLEKF--LVKHAWMSLKGIENVIVLVDVKNYLNQHLKKIIDRIKHSNLNA 119 Query: 153 QIVLTKIDKLSPTTAQETLE 172 +VL KID + + E +E Sbjct: 120 ILVLNKIDIVHQSIVSEVIE 139 >gi|332638612|ref|ZP_08417475.1| GTP-binding protein YlqF [Weissella cibaria KACC 11862] Length = 290 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 10/79 (12%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K P +G NVGKS+L+N LV KN+A T + PG T+ L + K +NL+ Sbjct: 119 KDKPIRALVAGIPNVGKSTLLNHLVT-KNVAITGDRPGVTKKLQWL--KTPTNLE----- 170 Query: 86 MALVDMPGYGYARAPKKNV 104 L+D PG + + + V Sbjct: 171 --LLDTPGVLWPKFEDQRV 187 >gi|313609087|gb|EFR84797.1| ribosome biogenesis GTP-binding protein YlqF [Listeria monocytogenes FSL F2-208] Length = 287 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G NVGKS+LIN L +KN+ART N PG T+ Sbjct: 127 GIPNVGKSTLINRLA-KKNIARTGNKPGVTK 156 >gi|304387955|ref|ZP_07370128.1| ribosome biogenesis GTP-binding protein [Neisseria meningitidis ATCC 13091] gi|304338052|gb|EFM04189.1| ribosome biogenesis GTP-binding protein [Neisseria meningitidis ATCC 13091] Length = 313 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|226943498|ref|YP_002798571.1| GTP-binding protein Era [Azotobacter vinelandii DJ] gi|259645940|sp|C1DQS3|ERA_AZOVD RecName: Full=GTPase Era gi|226718425|gb|ACO77596.1| GTP-binding protein Era [Azotobacter vinelandii DJ] Length = 300 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 12 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGDVQAIYVD 63 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG K+N + + + S V + + R + DQ V L Sbjct: 64 TPGL-----HKQNDKALNRYMNKTASAALKDVDVVIFVVDRMRWTEEDQLVLDRLQYVQG 118 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K D+L E L ++L + P A E++P S++ ++ L + + Sbjct: 119 PVLVAVNKADRLEDKV--ELLPHLQWLAQQLPNA--EIVPISALHGHNLDTLERLV 170 >gi|226315527|ref|YP_002775423.1| tRNA modification GTPase [Brevibacillus brevis NBRC 100599] gi|226098477|dbj|BAH46919.1| probable tRNA modification GTPase [Brevibacillus brevis NBRC 100599] Length = 458 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 23/176 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV + A ++ G T+ V +++ N++ +P + L+D Sbjct: 224 AIIGRPNVGKSSLLNSLVQEEK-AIVTDVAGTTRD----VIEEYVNVR-GVP-LRLIDTA 276 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G R L +++ L V L+I+ + D +F K Sbjct: 277 GI---RDTEDIVEKIGVEKSRQLLQKADL--VLLVINYNEPLSADDYAIFEA--AKGFHV 329 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ K D P LE+ K R++P P +I TS+ + GI++L +AI E Sbjct: 330 IVIVNKFD--LPQKVD--LEEIK---RHFPQ-QP-LIMTSAREETGIDLLEQAIGE 376 >gi|169824854|ref|YP_001692465.1| selenocysteine-specific elongation factor [Finegoldia magna ATCC 29328] gi|167831659|dbj|BAG08575.1| selenocysteine-specific elongation factor [Finegoldia magna ATCC 29328] Length = 625 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 5/89 (5%) Query: 121 LRCVYLLIDCRHGV--KQIDQ-DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 + + L IDC+ GV + ++ D+ FL+K +VLTK D + ++T+E+ K L Sbjct: 77 MDMILLCIDCKEGVMPQTVEHLDILRFLNK--TEGIVVLTKRDLATDEETEKTVEQVKEL 134 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ + + S+ ++GI+ L + I Sbjct: 135 VKGTFLENCPICEVDSISKRGIDNLIQMI 163 >gi|54310186|ref|YP_131206.1| GTP-binding protein Era [Photobacterium profundum SS9] gi|46914627|emb|CAG21404.1| putative GTP-binding protein Era [Photobacterium profundum SS9] Length = 301 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 IA GR NVGKS+L+N LV +K L+ TS P T+H Sbjct: 10 IAIVGRPNVGKSTLLNRLVGQK-LSITSRKPQTTRH 44 >gi|148265178|ref|YP_001231884.1| GTP-binding protein Era [Geobacter uraniireducens Rf4] gi|259645947|sp|A5G693|ERA_GEOUR RecName: Full=GTPase Era gi|146398678|gb|ABQ27311.1| GTP-binding protein Era [Geobacter uraniireducens Rf4] Length = 297 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 25/179 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MALV 89 ++ GR NVGKS+L+N ++ K + TS+ P T++ + +NLP M + Sbjct: 11 VSIIGRPNVGKSTLLNRILGDK-IVITSDKPQTTRNRIQGI--------HNLPGCQMVFI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG A K ++ + ++ LS + + L++ + + L Sbjct: 62 DTPGIHRA---KSKLNKY--MVDVALSSIKEVDVILFLVEADAKPANQEGMILELLANAD 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 +V+ KID A+E L + I Y +P E++P S++ G+E L + + Sbjct: 117 APVLLVINKID----LVAKEALLER---IAAYAALYPFREIVPVSALSGDGVERLVEVV 168 >gi|327312576|ref|YP_004328013.1| ribosome biogenesis GTPase Der [Prevotella denticola F0289] gi|326944058|gb|AEA19943.1| ribosome biogenesis GTPase Der [Prevotella denticola F0289] Length = 437 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 17/132 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A S+ G T+ + + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRH-AIVSDTAGTTRD------RQYGKCQWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLI---VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G+ K+ D + I V +E + L V L+D GV D+DV L + Sbjct: 58 GGWVV-----KSDDIFEDAIRKQVLVATEEADL--VLFLVDTETGVTDWDEDVAMILRRT 110 Query: 149 AVSYQIVLTKID 160 + +V K+D Sbjct: 111 KLPVLLVANKVD 122 >gi|254468868|ref|ZP_05082274.1| hypothetical protein KB13_1093 [beta proteobacterium KB13] gi|207087678|gb|EDZ64961.1| hypothetical protein KB13_1093 [beta proteobacterium KB13] Length = 280 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 16/83 (19%) Query: 21 IGLLPKAG----PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKD 75 + L+P G P G NVGKSSLIN+L +K +A+T + P TQ V D Sbjct: 104 MKLVPHRGTSIKPVRAIIIGIPNVGKSSLINLLTQKK-IAKTGDVPAVTQMQQRIIVDND 162 Query: 76 FSNLKNNLPAMALVDMPGYGYAR 98 F L D PG + + Sbjct: 163 F----------VLTDTPGLMWHK 175 >gi|218438564|ref|YP_002376893.1| ribosomal biogenesis GTPase [Cyanothece sp. PCC 7424] gi|218171292|gb|ACK70025.1| GTP-binding protein HSR1-related [Cyanothece sp. PCC 7424] Length = 281 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 12/74 (16%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E GLLP+ P G NVGKS+LIN L+ RK +A A G T+ L + D Sbjct: 115 ERGLLPR--PVRAVVIGFPNVGKSALINRLLGRKIVASARRA-GVTRQLRWVRISD---- 167 Query: 80 KNNLPAMALVDMPG 93 A+ L+D PG Sbjct: 168 -----AIELLDAPG 176 >gi|169348409|ref|ZP_02866347.1| hypothetical protein CLOSPI_00124 [Clostridium spiroforme DSM 1552] gi|169293878|gb|EDS76011.1| hypothetical protein CLOSPI_00124 [Clostridium spiroforme DSM 1552] Length = 434 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 15/156 (9%) Query: 28 GPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLP 84 EI FS GR NVGKSSL N ++ + + SN G T+ ++ KD + Sbjct: 170 AEDEIRFSIIGRPNVGKSSLTNSILGEERVI-VSNIEGTTRDAIDTVFEKDGQKYR---- 224 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 ++D G +NV+ + ++R LS + ++ID GV + D+ V + Sbjct: 225 ---VIDTAGMRKKGKIYENVEKYS--VLRALSSIEKSDVIVVVIDGERGVIEQDKHVAGY 279 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + +V+ K D + ++T++K + +R+ Sbjct: 280 AHEAGKGVILVVNKWDLVEKD--EKTMQKKEKELRS 313 >gi|51245541|ref|YP_065425.1| GTP-binding protein Era-like protein [Desulfotalea psychrophila LSv54] gi|50876578|emb|CAG36418.1| probable GTP-binding protein Era homolog [Desulfotalea psychrophila LSv54] Length = 313 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 30/188 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N L+ +K ++ ++ P T++ + + ++ + L+D Sbjct: 22 VAIVGPPNAGKSTLMNQLLGQK-ISIVTSKPQTTRN------RILGIVNDDAYQIVLLDT 74 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR-----HGVKQIDQDVFSFLD 146 PG A P N++ ++ L S + V L+D + + +++ +++ Sbjct: 75 PGLHKADEP-LNIE----MMRVALESLSEVDAVLFLVDVSLPLPPKALAKQREELAGYME 129 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYL--IRNYPTAHP--EVIPTSSVKRKGIEVL 202 K +VL K+D ++K K L I +Y P V+P S++ G + L Sbjct: 130 KIESPAILVLNKVD---------LIDKQKLLPMIESYAKLFPFKAVVPISALNGDGADNL 180 Query: 203 RKAILETI 210 K ILE I Sbjct: 181 LKEILELI 188 >gi|281339154|gb|EFB14738.1| hypothetical protein PANDA_010389 [Ailuropoda melanoleuca] Length = 627 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 11/92 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 VSH + + L+ + G K G + G NVGKSS IN ++ K ++ S Sbjct: 328 VSHLVSRRELLEILKQL-HTGKKVKDGQLTVGLVGYPNVGKSSTINTIMGDKKVS-VSAT 385 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 PG T+H + P + L D PG Sbjct: 386 PGHTKHFQTLYVE---------PGLCLCDCPG 408 >gi|254672013|emb|CBA04528.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|316983723|gb|EFV62704.1| conserved hypothetical protein [Neisseria meningitidis H44/76] gi|325200575|gb|ADY96030.1| GTPase family protein [Neisseria meningitidis H44/76] Length = 313 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|255100275|ref|ZP_05329252.1| putative GTPase [Clostridium difficile QCD-63q42] gi|255306215|ref|ZP_05350387.1| putative GTPase [Clostridium difficile ATCC 43255] Length = 298 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G NVGKSSLIN L RK+ +T + PG T+ K + LK NL L+D Sbjct: 136 IMIVGVPNVGKSSLINKLTGRKS-TQTGDKPGVTKG------KQWVRLKGNL---ELLDT 185 Query: 92 PGYGYARAPKKNV 104 PG + + + V Sbjct: 186 PGILWPKFEDQEV 198 >gi|34499367|ref|NP_903582.1| hypothetical protein CV_3912 [Chromobacterium violaceum ATCC 12472] gi|34105217|gb|AAQ61573.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 312 Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 17/92 (18%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDF 76 P G L K P + G NVGKS+LIN + +RK +A+T N PG T++ + DF Sbjct: 105 APNRGGLEK--PLRVLICGIPNVGKSTLINSMSSRK-IAKTGNMPGVTKNEQRIILADDF 161 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWG 108 L D PG + PK V+ G Sbjct: 162 E----------LYDTPGMLW---PKIEVEEGG 180 >gi|323971313|gb|EGB66556.1| selenocysteine-specific translation elongation protein [Escherichia coli TA007] Length = 425 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|297287198|ref|XP_001097108.2| PREDICTED: large subunit GTPase 1 homolog [Macaca mulatta] Length = 717 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G I G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 442 KDGQLTIGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 491 Query: 86 MALVDMPG 93 + L D PG Sbjct: 492 LCLCDCPG 499 >gi|50291015|ref|XP_447940.1| hypothetical protein [Candida glabrata CBS 138] gi|49527251|emb|CAG60891.1| unnamed protein product [Candida glabrata] Length = 639 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 10/67 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I G NVGKSS IN LV K ++ S+ PG+T+H F +K + M L D Sbjct: 339 QIGLVGYPNVGKSSTINSLVGAKKVS-VSSTPGKTKH--------FQTIKLSDHVM-LCD 388 Query: 91 MPGYGYA 97 PG +A Sbjct: 389 CPGLVFA 395 >gi|331269998|ref|YP_004396490.1| GTP-binding protein Era [Clostridium botulinum BKT015925] gi|329126548|gb|AEB76493.1| GTP-binding protein Era [Clostridium botulinum BKT015925] Length = 294 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 23/174 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 I+ GR NVGKS+LIN ++ K L+ S P T++ +D+ + + Sbjct: 7 ISIIGRPNVGKSTLINEILGEK-LSIVSCRPQTTRNNIRAILTKEDYQ--------LVFL 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG P+ + + ++ S + + + + + + + D+ + + Sbjct: 58 DTPG---IHKPRHKLGEY--MVKAAESSKDEVDLIVFITTPQSEIGKGDELILENIKNSN 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ KID+ P ETL+K ++Y+ E+IP S+ K K ++ L Sbjct: 113 KPVFLIVNKIDENPPELVAETLKKYSEYM------EFKEIIPISAQKNKNVDTL 160 >gi|326504644|dbj|BAK06613.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 303 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 24/184 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G+ NVGKS+LIN +V +K L+ ++ P T+H L ++ + L Sbjct: 105 VAVLGKPNVGKSTLINQIVGQK-LSIVTDKPQTTRHRILGICSEPEYQ--------IILY 155 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D PG KK + ++++ + S CV ++ D ++ID + + K Sbjct: 156 DTPG-----VIKKEMHKLDSMMMKNVQSAIGNADCVIVVADASKVPEKIDDMLEEGVGNK 210 Query: 149 A--VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V +VL K D + P + LE + T +VIP S+ G++ +++ I Sbjct: 211 ETKVPVVLVLNKKDMIKPGEIAKKLEWYQKF-----TDVDDVIPISAKFGHGVDDIKEWI 265 Query: 207 LETI 210 L + Sbjct: 266 LSKL 269 >gi|300704606|ref|YP_003746209.1| 30S ribosomal subunit-binding GTPase [Ralstonia solanacearum CFBP2957] gi|299072270|emb|CBJ43603.1| 30S ribosomal subunit_binding GTPase [Ralstonia solanacearum CFBP2957] Length = 290 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 22/172 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA-MALVD 90 +A GR NVGKS+L+N LV +K ++ TS T+H + ++ A VD Sbjct: 2 VAIVGRPNVGKSTLMNALVGQK-VSITSRKAQTTRH-------RITGIQTTDDAQFVFVD 53 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC-RHGVKQIDQDVFSFLDKKA 149 PG+ A N L S +++ V +++ R+G D V S L ++ Sbjct: 54 TPGFQTRHATALN----RSLNRAVTSTLTSVDAVLFVVEAGRYGPD--DAKVLSLLPRET 107 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGI 199 +++ K+D+L T E + +++ P E++P S+ R I Sbjct: 108 -PVILIVNKVDRLDAYTRAEMV---AVFLQDMAQVFPFKEIVPMSAKNRDDI 155 >gi|255527592|ref|ZP_05394456.1| tRNA modification GTPase TrmE [Clostridium carboxidivorans P7] gi|296186790|ref|ZP_06855191.1| tRNA modification GTPase TrmE [Clostridium carboxidivorans P7] gi|255508725|gb|EET85101.1| tRNA modification GTPase TrmE [Clostridium carboxidivorans P7] gi|296048504|gb|EFG87937.1| tRNA modification GTPase TrmE [Clostridium carboxidivorans P7] Length = 459 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 26/174 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+ R+ A + PG T+ V +++ N+ + +P + +VD G Sbjct: 230 GKPNVGKSSLLNSLL-REKRAIVTEIPGTTRD----VIEEYINI-DGVP-VKIVDTAGI- 281 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R V+ G + + + + + L++D + D+++ ++ DKK Y I Sbjct: 282 --RETNDFVEKIG--VEKSKEKINEADLIILMLDLSRELDNEDREIIDYIKDKK---YII 334 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +L K D L +E + K L NY ++ TS+ +G++ LR+ I E Sbjct: 335 LLNKSD-LGGKINKEDI---KNLNSNY------IVETSAKTGEGLDKLRECIRE 378 >gi|254974803|ref|ZP_05271275.1| putative GTPase [Clostridium difficile QCD-66c26] gi|255092191|ref|ZP_05321669.1| putative GTPase [Clostridium difficile CIP 107932] gi|255313930|ref|ZP_05355513.1| putative GTPase [Clostridium difficile QCD-76w55] gi|255516609|ref|ZP_05384285.1| putative GTPase [Clostridium difficile QCD-97b34] gi|255649709|ref|ZP_05396611.1| putative GTPase [Clostridium difficile QCD-37x79] gi|306519822|ref|ZP_07406169.1| putative GTPase [Clostridium difficile QCD-32g58] Length = 298 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G NVGKSSLIN L RK+ +T + PG T+ K + LK NL L+D Sbjct: 136 IMIVGVPNVGKSSLINKLTGRKS-TQTGDKPGVTKG------KQWVRLKGNL---ELLDT 185 Query: 92 PGYGYARAPKKNV 104 PG + + + V Sbjct: 186 PGILWPKFEDQEV 198 >gi|166154045|ref|YP_001654163.1| GTP-binding protein EngA [Chlamydia trachomatis 434/Bu] gi|166154920|ref|YP_001653175.1| GTP-binding protein EngA [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335246|ref|ZP_07223490.1| GTP-binding protein EngA [Chlamydia trachomatis L2tet1] gi|238687413|sp|B0BAF8|DER_CHLTB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238687426|sp|B0B8S9|DER_CHLT2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|165930033|emb|CAP03516.1| GTP-binding protein [Chlamydia trachomatis 434/Bu] gi|165930908|emb|CAP06470.1| GTP-binding protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 490 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 9/136 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A G NVGKSS+IN L+ + T N+PG T+ N D + NN Sbjct: 222 PVDRPLKVALIGHPNVGKSSIINALLKEERCI-TDNSPGTTRD-NI----DVAYTHNN-K 274 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D G ++ K +V+ R+ + C+ L+ID + D+ + S Sbjct: 275 EYVFIDTAGLRKTKSIKNSVEWMSSSRTEKAISRTDI-CL-LVIDATQQLSYQDKRILSM 332 Query: 145 LDKKAVSYQIVLTKID 160 + + + I++ K D Sbjct: 333 IARYKKPHVILVNKWD 348 >gi|121634536|ref|YP_974781.1| ribosomal biogenesis GTPase [Neisseria meningitidis FAM18] gi|120866242|emb|CAM09983.1| hypothetical protein NMC0692 [Neisseria meningitidis FAM18] gi|325131806|gb|EGC54506.1| GTPase family protein [Neisseria meningitidis M6190] gi|325137856|gb|EGC60431.1| GTPase family protein [Neisseria meningitidis ES14902] gi|325141989|gb|EGC64424.1| GTPase family protein [Neisseria meningitidis 961-5945] gi|325197960|gb|ADY93416.1| GTPase family protein [Neisseria meningitidis G2136] Length = 313 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|116333425|ref|YP_794952.1| GTP-binding protein EngA [Lactobacillus brevis ATCC 367] gi|122269888|sp|Q03SA1|DER_LACBA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|116098772|gb|ABJ63921.1| Predicted GTPase [Lactobacillus brevis ATCC 367] Length = 435 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 15/163 (9%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDF 76 PE PK + GR NVGKSSL+N ++ + + SN G T+ FV D Sbjct: 164 PEKDGAPKDDSIRFSLIGRPNVGKSSLVNAMLGEERVI-VSNIAGTTRDAIDTKFVADD- 221 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 +VD G +N + + ++R + V ++++ G+++ Sbjct: 222 -------TKFTMVDTAGIRKRGKVYENTERYS--VMRAMRAIDDSDVVLVVLNAEEGIRE 272 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 D+ V + + I++ K D L TL + LIR Sbjct: 273 QDKRVAGYAHEAGRGIIILVNKWDTLKKD--NHTLTDFQNLIR 313 >gi|119357863|ref|YP_912507.1| ribosome small subunit-dependent GTPase A [Chlorobium phaeobacteroides DSM 266] gi|119355212|gb|ABL66083.1| ribosome small subunit-dependent GTPase A [Chlorobium phaeobacteroides DSM 266] Length = 322 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 2/37 (5%) Query: 33 AFSGRSNVGKSSLINILVNRKNL--ARTSNAPGRTQH 67 A SG S VGKSS+IN+L +K + ARTS G+ H Sbjct: 194 AMSGHSGVGKSSIINVLTGQKRMKTARTSYKNGKGVH 230 >gi|328705376|ref|XP_003242779.1| PREDICTED: protein peanut-like isoform 5 [Acyrthosiphon pisum] Length = 623 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 26/155 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN---NLPAMALVDMP 92 GRS +GKS+LIN + + P V + LK NL ++ +VD P Sbjct: 226 GRSGLGKSTLINTMFLADIYGKEHPGPSLRVGKTVRVETNRCMLKEKGVNL-SLTVVDTP 284 Query: 93 GYGYARAPKKNVDSWGGLI-------VRYLSERSTLR-----------CVYLLIDCRHGV 134 G+G A N D W ++ YL+ S + C+Y L HG+ Sbjct: 285 GFGDA---VDNSDCWQPVLEYIESRYEEYLNAESRVNRKVQHDSRVHCCLYFLESNSHGM 341 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 +D + L K V+ +++K D ++P E Sbjct: 342 TPLDVEFMQRLHDK-VNIIPIISKADTMTPDEVTE 375 >gi|325855153|ref|ZP_08171776.1| ribosome biogenesis GTPase Der [Prevotella denticola CRIS 18C-A] gi|325483890|gb|EGC86834.1| ribosome biogenesis GTPase Der [Prevotella denticola CRIS 18C-A] Length = 437 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 17/132 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A S+ G T+ + + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRH-AIVSDTAGTTRD------RQYGKCQWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLI---VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G+ K+ D + I V +E + L V L+D GV D+DV L + Sbjct: 58 GGWVV-----KSDDIFEDAIRKQVLVATEEADL--VLFLVDTETGVTDWDEDVAMILRRT 110 Query: 149 AVSYQIVLTKID 160 + +V K+D Sbjct: 111 KLPVLLVANKVD 122 >gi|317153825|ref|YP_004121873.1| ribosome-associated GTPase EngA [Desulfovibrio aespoeensis Aspo-2] gi|316944076|gb|ADU63127.1| ribosome-associated GTPase EngA [Desulfovibrio aespoeensis Aspo-2] Length = 497 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 11/164 (6%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR N GKSS+IN ++ L S+ G T+ D + + VD G Sbjct: 192 GRPNAGKSSIINRIIGTDRLI-VSDVAGTTRD-----SIDVT-FERQGKRYTFVDTAGVR 244 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 +++++ ++R L L+ID GV + D+ + FL K+ + +V Sbjct: 245 RRANIQEHLEKIS--VIRALKNSKRSDVTILVIDITLGVGRQDKRLIEFLAKEKTPFMVV 302 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 K D + + + LE + +R P + +I TS+ K GI Sbjct: 303 CNKADLIPRSETKRALEAFREELRIIP--YVPLIMTSANKGVGI 344 >gi|261365437|ref|ZP_05978320.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria mucosa ATCC 25996] gi|288566102|gb|EFC87662.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria mucosa ATCC 25996] Length = 313 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|163782118|ref|ZP_02177117.1| GTP binding protein Era [Hydrogenivirga sp. 128-5-R1-1] gi|159882650|gb|EDP76155.1| GTP binding protein Era [Hydrogenivirga sp. 128-5-R1-1] Length = 431 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 24/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N +V R+ A + PG T+ S + LVD Sbjct: 5 VVIIGRPNVGKSSLFNRIVGRRK-AIVEDIPGVTRD------SVESKAEWGGKEFLLVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR--CVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G P + + G VR ER R + ++ + GV +D+++ L Sbjct: 58 GGL----VPDSHDEILEG--VRKTIEREVERSDVILFVVSVKDGVTPLDEEIARLLYPFG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D T + + Y V P SSV +G+ L +++ Sbjct: 112 DKVILVVNKVD---------TDRDEEVVSEFYQLGFRHVFPVSSVHGRGVGELLDEVVKR 162 Query: 210 INY 212 + Y Sbjct: 163 LRY 165 >gi|156550655|ref|XP_001605060.1| PREDICTED: similar to mmr1/hsr1 GTP binding protein [Nasonia vitripennis] Length = 590 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K+G + G NVGKSSLIN L+ +K + S PG T+H ++ K+ Sbjct: 340 KSGVLTVGCVGTPNVGKSSLINALMGKK-VVSVSRTPGHTKHFQTIYLTKN--------- 389 Query: 85 AMALVDMPG 93 + L D PG Sbjct: 390 -VCLCDCPG 397 >gi|149926461|ref|ZP_01914722.1| GTP-binding protein Era [Limnobacter sp. MED105] gi|149824824|gb|EDM84038.1| GTP-binding protein Era [Limnobacter sp. MED105] Length = 298 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ ++L+ TS+ P T+H V + +K+ VD Sbjct: 9 IAVVGRPNVGKSTLMNGMIG-EHLSITSSKPQTTRHRVLGVMTE--TIKDVPTQFIFVDT 65 Query: 92 PGY 94 PG+ Sbjct: 66 PGF 68 >gi|126466463|ref|YP_001041572.1| small GTP-binding protein [Staphylothermus marinus F1] gi|126015286|gb|ABN70664.1| small GTP-binding protein [Staphylothermus marinus F1] Length = 696 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 9/68 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ G+ NVGKS+L N+L RK +N PG T V K + + VD Sbjct: 7 EVGVIGQPNVGKSTLFNVLTGRK--VHVANWPGVT------VEKHVGERIHRGRRIIFVD 58 Query: 91 MPG-YGYA 97 +PG YG++ Sbjct: 59 LPGIYGFS 66 >gi|32473919|ref|NP_866913.1| ribosomal biogenesis GTPase [Rhodopirellula baltica SH 1] gi|32444456|emb|CAD74454.1| predicted GTPase [Rhodopirellula baltica SH 1] Length = 326 Score = 35.8 bits (81), Expect = 4.0, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 21 IGLLP--KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 IG+ P K G NVGKS++IN L RK +A+T N P TQH Sbjct: 102 IGMCPHRKGRSINAMVMGIPNVGKSTIINFLAGRK-VAKTGNTPAVTQH 149 >gi|260682865|ref|YP_003214150.1| putative GTPase [Clostridium difficile CD196] gi|260686463|ref|YP_003217596.1| putative GTPase [Clostridium difficile R20291] gi|260209028|emb|CBA62129.1| putative GTPase [Clostridium difficile CD196] gi|260212479|emb|CBE03390.1| putative GTPase [Clostridium difficile R20291] Length = 301 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 10/73 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G NVGKSSLIN L RK+ +T + PG T+ K + LK NL L+D Sbjct: 139 IMIVGVPNVGKSSLINKLTGRKS-TQTGDKPGVTKG------KQWVRLKGNL---ELLDT 188 Query: 92 PGYGYARAPKKNV 104 PG + + + V Sbjct: 189 PGILWPKFEDQEV 201 >gi|308182994|ref|YP_003927121.1| GTP-binding protein EngA [Helicobacter pylori PeCan4] gi|308065179|gb|ADO07071.1| GTP-binding protein EngA [Helicobacter pylori PeCan4] Length = 460 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 200 QVGIIGRVNVGKSSLLNALT-KKERSLVSSMAGTT-----IDPIDETILIGD-QKICFVD 252 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 253 TAGIRH-RGKILGIEKYALDRTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 309 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + I+ ++ I+E Sbjct: 310 GIILILNKWDIRYAPYEEIMAALKRKFRFLEYAP----VITTSCLKARHIDEIKHKIIE 364 >gi|299472031|emb|CBN80114.1| EIF5B, eukaryotic translation initiation factor 5B [Ectocarpus siliculosus] Length = 1036 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 78/205 (38%), Gaps = 50/205 (24%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVPKDFSN--------- 78 P + G + GK+ L++ + R+ + A G TQ + FF + Sbjct: 453 PIVCIMGHVDTGKTKLLDKI--RQTSVQEGEAGGITQQIGATFFSKETLCEKVEELNQTM 510 Query: 79 -LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + LP M ++D PG+ +S+ L R S L++D HG++ Sbjct: 511 KVDVKLPGMLIIDTPGH----------ESFTNLRSRG---SSLCDIAILVVDLMHGLEPQ 557 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL-------------------SPTTAQ----ETLEKT 174 + + L K + I L KID+ S TTA+ + L Sbjct: 558 TIESLNLLRSKRTPFVIALNKIDRCYAWKSTPDGPARLSLDKQESGTTAEFEDRKGLNTE 617 Query: 175 KYLIRNYPTAHPEVIPTSSVKRKGI 199 Y + PT ++PTS++ +GI Sbjct: 618 LYWKNDDPTHTVSMVPTSAITGEGI 642 >gi|194098042|ref|YP_002001090.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae NCCP11945] gi|193933332|gb|ACF29156.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] Length = 288 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 89 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 136 >gi|159487705|ref|XP_001701863.1| eukaryotic initiation factor [Chlamydomonas reinhardtii] gi|158281082|gb|EDP06838.1| eukaryotic initiation factor [Chlamydomonas reinhardtii] Length = 1651 Score = 35.8 bits (81), Expect = 4.1, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 31/141 (21%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKN-----------NL 83 G +VGK+ +++ + R+ + A G TQ + FVP D + L Sbjct: 1082 GHVDVGKTKILDNI--RRTNVQDGEAGGITQQIGATFVPADAVEKRTESLRGGRAFDMKL 1139 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDV 141 P + ++D PG+ +S+ L +R + C L++D HG++Q + Sbjct: 1140 PGLLVIDTPGH----------ESFTNL-----RQRGSGLCDMAVLIVDLMHGLEQQTIES 1184 Query: 142 FSFLDKKAVSYQIVLTKIDKL 162 + L + + I L K+D+L Sbjct: 1185 INLLKMRKTPFVIALNKVDRL 1205 >gi|311747504|ref|ZP_07721289.1| ferrous iron transport protein B [Algoriphagus sp. PR1] gi|126574864|gb|EAZ79235.1| ferrous iron transport protein B [Algoriphagus sp. PR1] Length = 708 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 20/175 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA G NVGKS++ N L + N PG T V K + +V Sbjct: 13 PKIAIIGNPNVGKSTIFNQLTGLNQ--KIGNYPGVT------VDKKIGWMNFEGSTYEIV 64 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PG Y+ P + ++ ++ + V ++ID + + FL + Sbjct: 65 DLPG-TYSLYPNSEDEIIAHRVLNHIDKEKRPDYVLMVIDSCQLSRGL------FLATQL 117 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + I L + ++ ++ LE IRNY +P S +GI+ L + Sbjct: 118 IDLGIQLAIVLNMADLASKNNLE-----IRNYEIYKSLGVPILSTDARGIKGLDQ 167 >gi|91210166|ref|YP_540152.1| hypothetical protein UTI89_C1138 [Escherichia coli UTI89] gi|91071740|gb|ABE06621.1| hypothetical protein UTI89_C1138 [Escherichia coli UTI89] gi|294493231|gb|ADE91987.1| putative GTPase [Escherichia coli IHE3034] gi|307627510|gb|ADN71814.1| hypothetical protein UM146_12225 [Escherichia coli UM146] Length = 290 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 66/173 (38%), Gaps = 27/173 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHNMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEV 188 V+T+ DK SP AQ EKT+ + R + HP V Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVV 196 >gi|325203827|gb|ADY99280.1| GTPase family protein [Neisseria meningitidis M01-240355] Length = 313 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|325129877|gb|EGC52680.1| hypothetical protein NMBOX9930304_1324 [Neisseria meningitidis OX99.30304] gi|325202463|gb|ADY97917.1| conserved hypothetical protein [Neisseria meningitidis M01-240149] gi|325207785|gb|ADZ03237.1| GTPase family protein [Neisseria meningitidis NZ-05/33] Length = 313 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|313240834|emb|CBY33124.1| unnamed protein product [Oikopleura dioica] Length = 395 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 59/148 (39%), Gaps = 21/148 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL----VDM 91 G S +GKS+LIN L NL P V + S ++ + L VD Sbjct: 69 GESGLGKSTLINSLF-LTNLYEEREIPEAAIKAKQTVSIEASTVEIEERGVKLRLTVVDT 127 Query: 92 PGYGYARAPKKNVDSWGGLI----VRYLSERSTLR-----------CVYLLIDCRHGVKQ 136 PG+G A K D I RYL + S L C Y + C HG++ Sbjct: 128 PGFGDAIDNKNAFDPIIEYIDNQFERYLHDESGLNRRHIVDNRVHCCFYFINPCGHGLRP 187 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 ID + L + V+ ++ K D L+P Sbjct: 188 IDIEFMKTLQTR-VNLVPLIAKADMLTP 214 >gi|261392892|emb|CAX50473.1| putative GTP-binding protein [Neisseria meningitidis 8013] Length = 313 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|15892953|ref|NP_360667.1| GTP-binding protein EngA [Rickettsia conorii str. Malish 7] gi|24636839|sp|Q92GU2|DER_RICCN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|15620147|gb|AAL03568.1| conserved GTP-binding protein [Rickettsia conorii str. Malish 7] Length = 447 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 29/189 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I SGR N GKS+ IN L+N + L T G T+ + D+ KNN + L+D Sbjct: 181 QIVVSGRPNAGKSTFINALINDERLL-TGPEAGITRE---SIEIDWQ-YKNN--HIKLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTL------RCVYLLIDCRHGVKQIDQDVFSF 144 G ++++ LS T+ V L+ID +KQ D ++ S Sbjct: 234 TAGLRKKSTITESLEK--------LSASDTINSIKFANTVILMIDALAPLKQQDLNIASH 285 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPT---SSVKRKGI 199 + + S IV+ K D + + + E+ Y I T P+V IP S++ ++ I Sbjct: 286 VVHEGRSIVIVVNKWDLVKESEKEAFQEEFYYQIN---THLPQVKGIPVLFISAINKQNI 342 Query: 200 EVLRKAILE 208 E + A L+ Sbjct: 343 EQVLDACLK 351 >gi|119598442|gb|EAW78036.1| large subunit GTPase 1 homolog (S. cerevisiae), isoform CRA_c [Homo sapiens] Length = 489 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|59711240|ref|YP_204016.1| GTP-binding protein EngA [Vibrio fischeri ES114] gi|197336109|ref|YP_002155390.1| ribosome-associated GTPase EngA [Vibrio fischeri MJ11] gi|81311005|sp|Q5E768|DER_VIBF1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238690264|sp|B5FAX6|DER_VIBFM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|59479341|gb|AAW85128.1| predicted GTP-binding protein [Vibrio fischeri ES114] gi|197317599|gb|ACH67046.1| ribosome-associated GTPase EngA [Vibrio fischeri MJ11] Length = 500 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 12/138 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + K L+ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRD------RKYGRAKLEEQEFILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V++ + + L+ V ++D R G+ D+ + L + Sbjct: 56 DTGGID---GTEQGVETK--MAEQSLAAIEEADVVLFMVDGRAGLTSADEAIAKHLRSRE 110 Query: 150 VSYQIVLTKIDKLSPTTA 167 +V+ KID + A Sbjct: 111 KPTFLVVNKIDGIDADAA 128 >gi|309378761|emb|CBX22587.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 313 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|254669789|emb|CBA04082.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 210 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 11 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 58 >gi|261400420|ref|ZP_05986545.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria lactamica ATCC 23970] gi|269209866|gb|EEZ76321.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria lactamica ATCC 23970] Length = 313 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|218128437|ref|ZP_03457241.1| hypothetical protein BACEGG_00005 [Bacteroides eggerthii DSM 20697] gi|317475737|ref|ZP_07934996.1| ribosome-associated GTPase EngA [Bacteroides eggerthii 1_2_48FAA] gi|217989328|gb|EEC55641.1| hypothetical protein BACEGG_00005 [Bacteroides eggerthii DSM 20697] gi|316908120|gb|EFV29815.1| ribosome-associated GTPase EngA [Bacteroides eggerthii 1_2_48FAA] Length = 437 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 19/144 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++FS Sbjct: 226 --YLVDTAGIRKKNKVNEDLEYYS--VIRSIRSIENSDVCILMLDATRGIESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 + K + +V+ K D + T + Sbjct: 282 IQKNSKGLVVVVNKWDLVEDKTVK 305 >gi|160895175|ref|ZP_02075948.1| hypothetical protein CLOL250_02735 [Clostridium sp. L2-50] gi|156863209|gb|EDO56640.1| hypothetical protein CLOL250_02735 [Clostridium sp. L2-50] Length = 301 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 23/184 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +S A + D + +D Sbjct: 10 VAIIGRPNVGKSTLMNQLIGQKIAITSSKAQTTRNRIQTVYTSDEGQI-------VFLDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG A+ + G +++ + + V +++ + ++ + L++ Sbjct: 63 PGINRAK------NKLGEYMLKVAEGTLNEVDVVMWIVEATTFIGAGERYIIEQLERVKT 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRKAILE 208 IV+ KID +S E+ I Y A H E++P S++K K + L K + + Sbjct: 117 PIIIVVNKIDAVSE-------EEVFKAISTYKDACSHAEIVPVSALKGKNKDELIKTLFK 169 Query: 209 TINY 212 + Y Sbjct: 170 YLPY 173 >gi|15605436|ref|NP_220222.1| GTP-binding protein EngA [Chlamydia trachomatis D/UW-3/CX] gi|255311532|ref|ZP_05354102.1| GTP-binding protein EngA [Chlamydia trachomatis 6276] gi|255317833|ref|ZP_05359079.1| GTP-binding protein EngA [Chlamydia trachomatis 6276s] gi|255349095|ref|ZP_05381102.1| GTP-binding protein EngA [Chlamydia trachomatis 70] gi|255503632|ref|ZP_05382022.1| GTP-binding protein EngA [Chlamydia trachomatis 70s] gi|255507311|ref|ZP_05382950.1| GTP-binding protein EngA [Chlamydia trachomatis D(s)2923] gi|8134429|sp|O84709|DER_CHLTR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|3329158|gb|AAC68298.1| GTPase/GTP-binding protein [Chlamydia trachomatis D/UW-3/CX] gi|289525747|emb|CBJ15228.1| GTP-binding protein [Chlamydia trachomatis Sweden2] gi|296435319|gb|ADH17497.1| GTP-binding protein EngA [Chlamydia trachomatis E/150] gi|296436247|gb|ADH18421.1| GTP-binding protein EngA [Chlamydia trachomatis G/9768] gi|296437176|gb|ADH19346.1| GTP-binding protein EngA [Chlamydia trachomatis G/11222] gi|296438107|gb|ADH20268.1| GTP-binding protein EngA [Chlamydia trachomatis G/11074] gi|296439036|gb|ADH21189.1| GTP-binding protein EngA [Chlamydia trachomatis E/11023] gi|297140608|gb|ADH97366.1| GTP-binding protein EngA [Chlamydia trachomatis G/9301] gi|297748834|gb|ADI51380.1| GTP-binding protein [Chlamydia trachomatis D-EC] gi|297749714|gb|ADI52392.1| GTP-binding protein [Chlamydia trachomatis D-LC] Length = 490 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 9/136 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A G NVGKSS+IN L+ + T N+PG T+ N D + NN Sbjct: 222 PVDRPLKVALIGHPNVGKSSIINALLKEERCI-TDNSPGTTRD-NI----DVAYTHNN-K 274 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D G ++ K +V+ R+ + C+ L+ID + D+ + S Sbjct: 275 EYVFIDTAGLRKTKSIKNSVEWMSSSRTEKAISRTDI-CL-LVIDATQQLSYQDKRILSM 332 Query: 145 LDKKAVSYQIVLTKID 160 + + + I++ K D Sbjct: 333 IARYKKPHVILVNKWD 348 >gi|71027325|ref|XP_763306.1| hypothetical protein [Theileria parva strain Muguga] gi|68350259|gb|EAN31023.1| hypothetical protein TP03_0288 [Theileria parva] Length = 700 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLART------SNAPGRT---QHLNFFVPKDFSNLKNN 82 ++ GRSNVGKS L N ++ + A S PG T + F+ LK N Sbjct: 3 VSLIGRSNVGKSRLFNSILAQAGKASNILKSIVSEKPGTTRDSKQAQFY-------LKGN 55 Query: 83 LPAMALVDMPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLIDCRHGVK 135 + LVD G+ + +K DS I+ ER T + V + ++D GV Sbjct: 56 --KITLVDTGGFEAFLTKTQKREDSTLSKII----ERETHKAVRSSNLIFFVLDGSEGVT 109 Query: 136 QID----QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH-PEVIP 190 +D + + ++LD+ + ++ L I+KL + E E + + T + E + Sbjct: 110 PLDVHLAEKLRNWLDQAHIKPEVKLV-INKLENKGSDEYYEALSDCLSDCHTLYMGEPVF 168 Query: 191 TSSVKRKGIEVLRKAILETI 210 S+ +R GI+ L I+E++ Sbjct: 169 VSAQERSGIDKL-TGIMESM 187 >gi|325268712|ref|ZP_08135341.1| ribosome-associated GTPase EngA [Prevotella multiformis DSM 16608] gi|324988956|gb|EGC20910.1| ribosome-associated GTPase EngA [Prevotella multiformis DSM 16608] Length = 437 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 17/132 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A S+ G T+ + + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTQTRH-AIVSDTAGTTRD------RQYGKCQWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLI---VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G+ K+ D + I V +E + L V L+D GV D+DV L + Sbjct: 58 GGWVV-----KSDDIFEDAIRKQVLVATEEADL--VLFLVDTETGVTDWDEDVAMILRRT 110 Query: 149 AVSYQIVLTKID 160 + +V K+D Sbjct: 111 KLPVLLVANKVD 122 >gi|313668784|ref|YP_004049068.1| hypothetical protein NLA_14950 [Neisseria lactamica ST-640] gi|313006246|emb|CBN87708.1| conserved hypothetical protein [Neisseria lactamica 020-06] Length = 313 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|298369008|ref|ZP_06980326.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria sp. oral taxon 014 str. F0314] gi|298283011|gb|EFI24498.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria sp. oral taxon 014 str. F0314] Length = 314 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|261884860|ref|ZP_06008899.1| GTP-binding protein EngA [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 153 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 13/130 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I GR NVGKSSL N L ++ +A TS+ G T+ N + F + KN + L+D Sbjct: 3 KIILVGRPNVGKSSLFNRLA-KQRIAITSDVSGTTRDTN--KAEIFIDDKNCI----LID 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + KNV + L+E + ++D ++ +ID+ F L Sbjct: 56 SGGLDDSNELFKNVK------INTLNEAKNADIIVFMVDGKNFPDEIDKRFFYELSNLNK 109 Query: 151 SYQIVLTKID 160 +V+ K+D Sbjct: 110 PIALVVNKVD 119 >gi|257453876|ref|ZP_05619154.1| ribosome-associated GTPase EngA [Enhydrobacter aerosaccus SK60] gi|257448803|gb|EEV23768.1| ribosome-associated GTPase EngA [Enhydrobacter aerosaccus SK60] Length = 467 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 9/132 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + ++P + N L+D Sbjct: 179 IAIIGRPNVGKSTLVNRLLGEERVV-VFDMPGTTRD-SIYIPYERDNRH-----YVLIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + +V+ L V ++ID + G+ D ++ + + + Sbjct: 232 AGVRRRGRIDEKVEKFS--VVKTLQAIKDAHVVIVVIDAQEGITDQDLNLLGYALEAGRA 289 Query: 152 YQIVLTKIDKLS 163 + + K D L Sbjct: 290 MVLAINKWDGLD 301 >gi|255065557|ref|ZP_05317412.1| ribosome biogeneis GTP-binding protein YlqF [Neisseria sicca ATCC 29256] gi|255050382|gb|EET45846.1| ribosome biogeneis GTP-binding protein YlqF [Neisseria sicca ATCC 29256] Length = 313 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|198274289|ref|ZP_03206821.1| hypothetical protein BACPLE_00431 [Bacteroides plebeius DSM 17135] gi|198272779|gb|EDY97048.1| hypothetical protein BACPLE_00431 [Bacteroides plebeius DSM 17135] Length = 441 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 23/184 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS+IN + +A T+ T++ F DF Sbjct: 180 PRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 229 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++FS Sbjct: 230 --YLVDTAGIRKKNKVSEDLEYYS--VIRSIRSIENSDVCILMLDATRGIEGQDLNIFSL 285 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSVKRKGIEV 201 + + +V+ K D + T + ++ + IRN T P V ++ K++ ++V Sbjct: 286 VQRNQKGLVVVVNKWDLIEDKTVK-VMKGYEDAIRNRLAPFTDFPIVFTSALTKQRILKV 344 Query: 202 LRKA 205 L A Sbjct: 345 LELA 348 >gi|149027234|gb|EDL82932.1| large subunit GTPase 1 homolog (S. cerevisiae), isoform CRA_a [Rattus norvegicus] Length = 480 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 380 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 429 Query: 86 MALVDMPG 93 + L D PG Sbjct: 430 LCLCDCPG 437 >gi|327441072|dbj|BAK17437.1| predicted GTPase [Solibacillus silvestris StLB046] Length = 317 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 14/73 (19%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLK 80 G+ P+A I G NVGKS+LIN L +KNLA+T N PG T+ + V K+ Sbjct: 115 GMKPRAIRAMIV--GIPNVGKSTLINRLA-KKNLAKTGNMPGVTKAQQWIKVGKEIE--- 168 Query: 81 NNLPAMALVDMPG 93 L+D PG Sbjct: 169 -------LLDTPG 174 >gi|306814136|ref|ZP_07448304.1| hypothetical protein ECNC101_18876 [Escherichia coli NC101] gi|305852501|gb|EFM52951.1| hypothetical protein ECNC101_18876 [Escherichia coli NC101] Length = 290 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 66/173 (38%), Gaps = 27/173 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + M + Sbjct: 37 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHNMVIT 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 90 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 143 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEV 188 V+T+ DK SP AQ EKT+ + R + HP V Sbjct: 144 HQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVV 196 >gi|94497605|ref|ZP_01304174.1| GTP-binding protein Era [Sphingomonas sp. SKA58] gi|94423022|gb|EAT08054.1| GTP-binding protein Era [Sphingomonas sp. SKA58] Length = 302 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 26/136 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +A G N GKS+L+N LV +K + A RT+ + + D + LVD Sbjct: 13 VAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQ--------IVLVD 64 Query: 91 MPGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 PG APK+ +D +WGG ++ + L + L++D + G+ + + Sbjct: 65 TPGI---FAPKRRLDRAMVQAAWGG------AQGADL--IALVVDGKAGLGPKMEPIVEA 113 Query: 145 LDKKAVSYQIVLTKID 160 L ++ +VL K+D Sbjct: 114 LVHRSERKWLVLNKVD 129 >gi|76789443|ref|YP_328529.1| GTP-binding protein EngA [Chlamydia trachomatis A/HAR-13] gi|237803133|ref|YP_002888327.1| GTP-binding protein EngA [Chlamydia trachomatis B/Jali20/OT] gi|237805054|ref|YP_002889208.1| GTP-binding protein EngA [Chlamydia trachomatis B/TZ1A828/OT] gi|123606653|sp|Q3KKZ1|DER_CHLTA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|76167973|gb|AAX50981.1| GTP-binding protein [Chlamydia trachomatis A/HAR-13] gi|231273354|emb|CAX10269.1| GTP-binding protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231274367|emb|CAX11162.1| GTP-binding protein [Chlamydia trachomatis B/Jali20/OT] Length = 490 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 9/136 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A G NVGKSS+IN L+ + T N+PG T+ N D + NN Sbjct: 222 PVDRPLKVALIGHPNVGKSSIINALLKEERCI-TDNSPGTTRD-NI----DVAYTHNN-K 274 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D G ++ K +V+ R+ + C+ L+ID + D+ + S Sbjct: 275 EYVFIDTAGLRKTKSIKNSVEWMSSSRTEKAISRTDI-CL-LVIDATQQLSYQDKRILSM 332 Query: 145 LDKKAVSYQIVLTKID 160 + + + I++ K D Sbjct: 333 IARYKKPHVILVNKWD 348 >gi|21674598|ref|NP_662663.1| GTP-binding protein EngA [Chlorobium tepidum TLS] gi|26006711|sp|Q8KBK3|DER_CHLTE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|21647797|gb|AAM73005.1| GTP-binding protein [Chlorobium tepidum TLS] Length = 437 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 13/144 (9%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE + + ++A GR NVGKSSL+N L+ + S+ PG T+ V Sbjct: 167 PEGEEIEEDDSIKLAVLGRPNVGKSSLVNALLGTERHI-VSDVPGTTRDAIDSV------ 219 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQ 136 LK N L+D G + +D+ + R+ RC +L+D R G++ Sbjct: 220 LKRNGEEYVLIDTAGL----RKRTKIDAGIEFYSSLRTARAIERCDVALVLLDARLGLES 275 Query: 137 IDQDVFSFLDKKAVSYQIVLTKID 160 D + ++ I++ K D Sbjct: 276 QDMKIIHMAIERKKGVLILVNKWD 299 >gi|134301153|ref|YP_001114649.1| tRNA modification GTPase TrmE [Desulfotomaculum reducens MI-1] gi|189036201|sp|A4J9S1|MNME_DESRM RecName: Full=tRNA modification GTPase mnmE gi|134053853|gb|ABO51824.1| tRNA modification GTPase trmE [Desulfotomaculum reducens MI-1] Length = 461 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 24/176 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L++ + A ++ PG T+ V ++ ++K +P + ++D G Sbjct: 229 GKPNVGKSSLLNALLHEQR-AIVTDIPGTTRD----VIEEILSIK-GVP-LKIIDTAGL- 280 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQI 154 R + V+ G R L ++ + V ++D G+ D+ V + DKK Sbjct: 281 --RETQDLVEKIGVEKSRELLNQADI--VLFVLDATTGISDEDRKVIDLIKDKK------ 330 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 VL I+K+ T + + + LI N+ E+I S+ K G++ L + I + Sbjct: 331 VLILINKIDITKNKIDSHEIRQLI-NF----SEIIEISAQKEIGLDKLEETIFNMV 381 >gi|300814694|ref|ZP_07094944.1| ribosome-associated GTPase EngA [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511167|gb|EFK38417.1| ribosome-associated GTPase EngA [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 439 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 22/161 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ G+ NVGKSSL N L +++ + +N G T+ + S N VD Sbjct: 178 VSIIGKPNVGKSSLFNYL-SKEERSIVTNIAGTTRDA---IDTKISYKDNE---YIFVDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G + K++V+ + ++R L+ ERS++ C+ LL+D G+ + D + F Sbjct: 231 AGLRKRKKIKESVERYS--VIRTLTAIERSSV-CL-LLVDATEGISEQDSKIAGFAHDNN 286 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + I + K D +EK Y ++N+ +P Sbjct: 287 KAMIICVNKWD---------AIEKDTYTMKNFEADVRRELP 318 >gi|290992156|ref|XP_002678700.1| predicted protein [Naegleria gruberi] gi|284092314|gb|EFC45956.1| predicted protein [Naegleria gruberi] Length = 729 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 29/147 (19%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKDF------------ 76 P G +VGK+ +++ + R ++ A G TQ + +VP D Sbjct: 143 PICCVLGHVDVGKTKILDKI--RSTNVQSGEAGGITQQIGATYVPIDAIKKQTFKLNESV 200 Query: 77 -SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 L+ NLP + ++D PG+ +S+ L R S L+ID +HG++ Sbjct: 201 KKQLQYNLPGLLIIDTPGH----------ESFNNLRSRG---SSLCDIAILVIDIKHGLE 247 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKL 162 + + + + + + L K+D L Sbjct: 248 RQTIESLQLIKNRKTPFIVALNKVDAL 274 >gi|261377856|ref|ZP_05982429.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria cinerea ATCC 14685] gi|269145705|gb|EEZ72123.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria cinerea ATCC 14685] Length = 313 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|126309497|ref|XP_001368459.1| PREDICTED: similar to guanine nucleotide binding protein-like 1 [Monodelphis domestica] Length = 606 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSLIN LV RK ++ S PG T++ +F+ P Sbjct: 357 KDGVVTIGCVGFPNVGKSSLINGLVGRKVVS-VSRTPGHTRYFQTYFL----------TP 405 Query: 85 AMALVDMPG 93 + L D PG Sbjct: 406 TVRLCDCPG 414 >gi|52786163|ref|YP_091992.1| GTP-binding protein EngA [Bacillus licheniformis ATCC 14580] gi|163119516|ref|YP_079584.2| GTP-binding protein EngA [Bacillus licheniformis ATCC 14580] gi|319645250|ref|ZP_07999483.1| GTP-binding protein engA [Bacillus sp. BT1B_CT2] gi|81825274|sp|Q65I15|DER_BACLD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|52348665|gb|AAU41299.1| YphC [Bacillus licheniformis ATCC 14580] gi|145903023|gb|AAU23946.2| GTP-binding protein essential for cell growth [Bacillus licheniformis ATCC 14580] gi|317393059|gb|EFV73853.1| GTP-binding protein engA [Bacillus sp. BT1B_CT2] Length = 436 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 13/174 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ + F+ N +VD G Sbjct: 182 GRPNVGKSSLVNAMIGEERVI-VSNIAGTTRDA---IDTRFT---YNQRDFVIVDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 + + + L +RS + CV L D G+ + D+ + + + + IV Sbjct: 235 KKGKVYEATEKYSVLRALKAIDRSEVVCVVL--DGEEGIIEQDKRIAGYAHEAGKAVVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAIL 207 + K D + + T+++ + +R++ + V+ S++ +K I L A++ Sbjct: 293 VNKWDAVEKD--ERTMKEFEEKVRDHFQFLDYAPVLFMSALTKKRIHTLMPAVM 344 >gi|332359145|gb|EGJ36966.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK49] Length = 436 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 19/155 (12%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + IV+ K D TLEK + ++++ Sbjct: 284 EAGKGIIIVVNKWD---------TLEKDNHTMKDW 309 >gi|258512903|ref|YP_003186337.1| tRNA modification GTPase TrmE [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479629|gb|ACV59948.1| tRNA modification GTPase TrmE [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 465 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 7/61 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV R+ A ++ PG T+ V +++ NL+ +P + L+D Sbjct: 231 AIVGRPNVGKSSLLNALVERER-AIVTDLPGTTRD----VLEEYINLR-GIP-LRLIDTA 283 Query: 93 G 93 G Sbjct: 284 G 284 >gi|72392142|ref|XP_846365.1| GTP-binding protein [Trypanosoma brucei TREU927] gi|62359539|gb|AAX79974.1| GTP-binding protein, putative [Trypanosoma brucei] gi|70802901|gb|AAZ12806.1| GTP-binding protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 601 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 10/92 (10%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L+ V G P + G NVGKSSLIN L RK++ + + PG T+ + Sbjct: 304 LQNVTHRGSSRTKTPISVGIIGYPNVGKSSLINTL-RRKSVCKVAPIPGETKVWQYVA-- 360 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDS 106 L N+ L+D PG Y R +V + Sbjct: 361 ----LTRNI---FLIDCPGVVYDRETNNDVQA 385 >gi|58040398|ref|YP_192362.1| GTP-binding protein EngA [Gluconobacter oxydans 621H] gi|58002812|gb|AAW61706.1| GTP-binding protein [Gluconobacter oxydans 621H] Length = 463 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 11/138 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + +GR NVGKS+L N LV R+ A S+ PG T+ K+ L + L+ Sbjct: 11 PVVVIAGRPNVGKSTLFNRLVGRRQ-AIVSDMPGVTRDR-----KEGEALLRGR-RVRLI 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G A AP +G + S + V ID R G+ D S+L ++ Sbjct: 64 DTAGLEEA-APDT---LYGRMRASSESAVAMADLVLFCIDARSGITPADAHFASWLRRQN 119 Query: 150 VSYQIVLTKIDKLSPTTA 167 ++ K + + T A Sbjct: 120 RPVLLIANKAEGQAGTNA 137 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 19/187 (10%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 AGP +A GR N GKS+L+N L+ + + T G T+ + V L + + Sbjct: 194 AGPLRLAIIGRPNAGKSTLLNCLLGEERMI-TGPEAGLTRD-SITV-----ELHDEHGPI 246 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G +++++ + + V L+ID GV + D + ++ Sbjct: 247 QLVDTAGMRKRARVEQHLEKMS--VSASIEALKMAEVVVLVIDATLGVHEQDLQIGRLIE 304 Query: 147 KKAVSYQIVLTKIDKLSPTTAQ-----ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ + I L K D + A + LE + +R P V+ S++ G+ Sbjct: 305 REGRACVIALNKWDAVEDRNATKKAILDRLEISLAQVRGIP-----VVTFSALTGAGVHR 359 Query: 202 LRKAILE 208 L A+ E Sbjct: 360 LLPAVRE 366 >gi|12044858|ref|NP_072668.1| tRNA modification GTPase TrmE [Mycoplasma genitalium G37] gi|1351237|sp|P47254|MNME_MYCGE RecName: Full=tRNA modification GTPase mnmE gi|1045676|gb|AAC71224.1| tRNA modification GTPase TrmE [Mycoplasma genitalium G37] gi|166078782|gb|ABY79400.1| tRNA modification GTPase TrmE [synthetic Mycoplasma genitalium JCVI-1.0] Length = 442 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P +IA G +NVGKSSL+N L+N+ A SN G T+ + V DF+ Sbjct: 217 PFKIAIIGETNVGKSSLLNALLNQDK-AIVSNIKGSTRDV---VEGDFN 261 >gi|118586885|ref|ZP_01544319.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118432717|gb|EAV39449.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 293 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 G NVGKS+ IN L KN+ART+N PG T L Sbjct: 137 GTPNVGKSTFINHLAG-KNIARTANKPGVTHFL 168 >gi|42523421|ref|NP_968801.1| GTP-binding protein [Bdellovibrio bacteriovorus HD100] gi|39575627|emb|CAE79794.1| probable GTP-binding protein [Bdellovibrio bacteriovorus HD100] Length = 449 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 22/136 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A GR NVGKS+L NI+ + A N G T+ + + V Sbjct: 11 PKVAIIGRPNVGKSTLFNIITETRK-AVVKNQAGVTRDI----------------MIEPV 53 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLI---DCRHGVKQIDQDVFSF 144 D+ G + + G + + + E+ T L V L++ D R G+ D+D+ Sbjct: 54 DIWGKQFDLIDTGGITEAGDIFSKLIKEQVTEFLHSVDLIVAVMDGRVGLVPEDRDIIRV 113 Query: 145 LDKKAVSYQIVLTKID 160 + + +V+ K+D Sbjct: 114 AKQTGKPFLLVINKVD 129 >gi|15834701|ref|NP_296460.1| GTP-binding protein EngA [Chlamydia muridarum Nigg] gi|270284867|ref|ZP_06194261.1| GTP-binding protein EngA [Chlamydia muridarum Nigg] gi|301336246|ref|ZP_07224448.1| GTP-binding protein EngA [Chlamydia muridarum MopnTet14] gi|14194736|sp|Q9PLM3|DER_CHLMU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|7190111|gb|AAF38958.1| GTP-binding protein, Era/ThdF family [Chlamydia muridarum Nigg] Length = 490 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G NVGKSS++N L+ + T N+PG T+ N V + N Sbjct: 226 PLKVALIGHPNVGKSSIVNALLKEERCI-TDNSPGTTRD-NVDVSYTY-----NDKEYVF 278 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G A++ K +V+ R+ + C+ L+ID + D+ + S + + Sbjct: 279 IDTAGLRKAKSIKNSVEWMSSSRTEKAISRADI-CL-LVIDATQQLSYQDKRILSLIARY 336 Query: 149 AVSYQIVLTKID 160 + I++ K D Sbjct: 337 KKPHVILVNKWD 348 >gi|329957356|ref|ZP_08297876.1| ribosome biogenesis GTPase Der [Bacteroides clarus YIT 12056] gi|328523069|gb|EGF50172.1| ribosome biogenesis GTPase Der [Bacteroides clarus YIT 12056] Length = 437 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 19/144 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++FS Sbjct: 226 --YLVDTAGIRKKNKVSEDLEYYS--VIRSIRSIENSDVCILMLDATRGIESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQ 168 + K + +V+ K D + T + Sbjct: 282 IQKNSKGLVVVVNKWDLVEDKTVK 305 >gi|296313362|ref|ZP_06863303.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria polysaccharea ATCC 43768] gi|296840126|gb|EFH24064.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria polysaccharea ATCC 43768] Length = 313 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|317128319|ref|YP_004094601.1| GTP-binding protein Era [Bacillus cellulosilyticus DSM 2522] gi|315473267|gb|ADU29870.1| GTP-binding protein Era [Bacillus cellulosilyticus DSM 2522] Length = 298 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 21/182 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K + A + +D + +D Sbjct: 8 VALIGRPNVGKSTLLNEVLGQKIAIMSDKAQTTRNRIQGVYTEDRGQV-------IFIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + I + + + + L+D + G + D+ + L Sbjct: 61 PG---IHKPKHRLGDFMMKIAQ--TTLKEVDAILFLVDAKEGRGKGDEFIMEKLKHVTTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAILET 209 +++ KID++ P ++ LI +Y EVIP S++ +E L + + Sbjct: 116 IFLIVNKIDEVHP-------DELFLLIDDYRKRFEFTEVIPISALYGNNVETLLDQVFKY 168 Query: 210 IN 211 ++ Sbjct: 169 LD 170 >gi|257468027|ref|ZP_05632123.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] gi|317062313|ref|ZP_07926798.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313687989|gb|EFS24824.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 404 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 P+ IA GR+N GKSSLIN + N+ N++ S+ G T Sbjct: 5 PRGNRVHIAIFGRTNAGKSSLINCITNQ-NISLVSDVKGTT 44 >gi|242007196|ref|XP_002424428.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212507828|gb|EEB11690.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 578 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 10/66 (15%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G + G NVGKSS +N L++ K +A S PG+T+H F NL +++ Sbjct: 299 GKTTVGLVGYPNVGKSSTVNSLLSCKKVA-VSATPGKTKHFQTF------NLSDDI---I 348 Query: 88 LVDMPG 93 L D PG Sbjct: 349 LCDCPG 354 >gi|216263461|ref|ZP_03435456.1| ribosome-associated GTPase EngA [Borrelia afzelii ACA-1] gi|215980305|gb|EEC21126.1| ribosome-associated GTPase EngA [Borrelia afzelii ACA-1] Length = 433 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 13/132 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF--SNLKNNLPAMAL 88 ++ G+ N GKS+LIN L + ++ S+ PG T +DF + L N + Sbjct: 175 KVGIIGKPNSGKSTLINYLSGNE-ISIVSDKPGTT--------RDFIKTKLTRNGKVFEI 225 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + + R L + V+LLID + + D+ + ++ KK Sbjct: 226 IDTAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVKEELTSQDKKIAHYVTKK 283 Query: 149 AVSYQIVLTKID 160 IV +K D Sbjct: 284 GKGIIIVFSKWD 295 >gi|160946385|ref|ZP_02093594.1| hypothetical protein PEPMIC_00345 [Parvimonas micra ATCC 33270] gi|158447501|gb|EDP24496.1| hypothetical protein PEPMIC_00345 [Parvimonas micra ATCC 33270] Length = 441 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 9/130 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA G+ NVGKSSL+N ++ + + + A ++ S ++ + D Sbjct: 178 KIALIGKPNVGKSSLMNRILGEERMIVSDIAGTTRDSID-------SRVEIDGKTYIFTD 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R +N++ + +VR L+ LLID GV + D V F ++ Sbjct: 231 TAGLRRKRNITENLERYS--VVRTLNAVERSDIAILLIDATEGVTEQDTKVIGFAKEQNK 288 Query: 151 SYQIVLTKID 160 + I + K D Sbjct: 289 ALIIAVNKWD 298 >gi|123967979|ref|YP_001008837.1| GTP-binding protein EngA [Prochlorococcus marinus str. AS9601] gi|166225839|sp|A2BPL9|DER_PROMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123198089|gb|ABM69730.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str. AS9601] Length = 457 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 15/153 (9%) Query: 21 IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 IG LP+ + ++ GR NVGKSSL+N + K + + T ++ + K Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKRAIVSDISGTTTDSIDTLIKK 221 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 +N K ++D G + K + +G I R L+ID GV Sbjct: 222 GDNNWK-------IIDTAGIRRKKNVKYGTEFFG--INRAFKSIDRSDVCVLVIDAVDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA 167 DQ + ++++ + IV+ K D + ++ Sbjct: 273 TDQDQKLAGRIEEQGRACIIVVNKWDLIEKNSS 305 >gi|89052690|ref|YP_508141.1| tRNA modification GTPase TrmE [Jannaschia sp. CCS1] gi|122499793|sp|Q28VZ6|MNME_JANSC RecName: Full=tRNA modification GTPase mnmE gi|88862239|gb|ABD53116.1| tRNA modification GTPase trmE [Jannaschia sp. CCS1] Length = 426 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 1/38 (2%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 E+A G N GKS+L+N+L +R+ +A TS+ PG T+ + Sbjct: 215 EVAILGAPNAGKSTLLNVLADRE-IAITSDVPGTTRDV 251 >gi|28211641|ref|NP_782585.1| GTP-binding protein Era [Clostridium tetani E88] gi|75541993|sp|Q892S2|ERA_CLOTE RecName: Full=GTPase Era gi|28204083|gb|AAO36522.1| GTP-binding protein era [Clostridium tetani E88] Length = 295 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 54/190 (28%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP----AMA 87 I GR NVGKS+L+N ++ K L+ S+ P T+ +N++ L + Sbjct: 7 ITVIGRPNVGKSTLLNNIMKEK-LSIVSHKPQTTR----------NNIQTILTQEDCQIV 55 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG------------VK 135 VD PG PK + G +V+ E + L + G +K Sbjct: 56 FVDTPG---MHKPKHKL---GEYMVKVAEEALKGVDIVLFMTTPEGQLGRGDVYILEQLK 109 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP---EVIPTS 192 +I Q VF +++ KID+ ETL +NY A+P E+IP S Sbjct: 110 RIKQPVF-----------LIVNKIDENDQGKVAETL-------KNYHDAYPFFKEIIPIS 151 Query: 193 SVKRKGIEVL 202 + K K ++ L Sbjct: 152 ASKDKNVDTL 161 >gi|327542996|gb|EGF29444.1| ribosomal biogenesis GTPase [Rhodopirellula baltica WH47] Length = 326 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 21 IGLLP--KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 IG+ P K G NVGKS++IN L RK +A+T N P TQH Sbjct: 102 IGMCPHRKGRSINAMVMGIPNVGKSTIINFLAGRK-VAKTGNTPAVTQH 149 >gi|329114469|ref|ZP_08243231.1| GTP-binding protein Era-like protein [Acetobacter pomorum DM001] gi|326696545|gb|EGE48224.1| GTP-binding protein Era-like protein [Acetobacter pomorum DM001] Length = 300 Score = 35.8 bits (81), Expect = 4.4, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 66/170 (38%), Gaps = 17/170 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G N GKS+L+N + A+ S + Q F V L + LVD P Sbjct: 12 ALVGAPNAGKSTLLNRMAG----AKLSIVSPKAQTTRFRV---LGILMRGHSQILLVDTP 64 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G P++ +D ++ + LL+D R G+ + Q + L + Sbjct: 65 GIFR---PRRKLDR--AMVAAAWTGAEDADITLLLVDARSGLTEAVQTIIERLAETKRKV 119 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +VL K D L P TA L T + P H V S+ G+E L Sbjct: 120 WLVLNKTD-LVPATA--LLPLTASITEKLPVEH--VFMVSARTGNGVEDL 164 >gi|301772158|ref|XP_002921505.1| PREDICTED: large subunit GTPase 1 homolog [Ailuropoda melanoleuca] Length = 659 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 11/92 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 VSH + + L+ + G K G + G NVGKSS IN ++ K ++ S Sbjct: 361 VSHLVSRRELLEILKQL-HTGKKVKDGQLTVGLVGYPNVGKSSTINTIMGDKKVS-VSAT 418 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 PG T+H + P + L D PG Sbjct: 419 PGHTKHFQTLYVE---------PGLCLCDCPG 441 >gi|260438846|ref|ZP_05792662.1| GTP-binding protein Era [Butyrivibrio crossotus DSM 2876] gi|292808685|gb|EFF67890.1| GTP-binding protein Era [Butyrivibrio crossotus DSM 2876] Length = 298 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +A GR NVGKS+L+N L+ +K +A TSN P T++ Sbjct: 8 VALIGRPNVGKSTLMNYLIGQK-IAITSNKPQTTRN 42 >gi|218550868|ref|YP_002384659.1| selenocysteinyl-tRNA-specific translation factor [Escherichia fergusonii ATCC 35469] gi|218358409|emb|CAQ91056.1| selenocysteinyl-tRNA-specific translation factor [Escherichia fergusonii ATCC 35469] Length = 615 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPTLTVALTKADRVDEARVGEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 DAKLFVTAATEGRGIDALREHLLQ 163 >gi|325846572|ref|ZP_08169487.1| ribosome biogenesis GTPase Der [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481330|gb|EGC84371.1| ribosome biogenesis GTPase Der [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 438 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 13/150 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 IA G+ N GKSSL+N L+N + + T A ++ ++ KD NN L+D Sbjct: 178 IAIIGKPNAGKSSLVNHLLNEERMIVTDIAGTTRDAIDTYWQYKD-----NN---YVLID 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G N++ + R + LID GV + D + + K Sbjct: 230 TAGLRRKNKVSDNIEYYANQ--RTFDAVDSSEICLFLIDATVGVTEQDTKIAGYAHNKRK 287 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + I + K DK+ T T+ + IRN Sbjct: 288 AIIIAVNKWDKVEKET--NTMRNMEREIRN 315 >gi|319400824|gb|EFV89043.1| small GTP-binding domain protein [Staphylococcus epidermidis FRI909] Length = 436 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ + ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEERVI-VSNVAGTTRDA---IDTEYSYDGQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS V ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERS--EVVLVVIDAEQGIIEQDKRVAGYAHEEGKAIVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRN 180 + K D + + +T++K +RN Sbjct: 293 VNKWDTVEKDS--KTMKKFTDDVRN 315 >gi|313901830|ref|ZP_07835252.1| ribosome-associated GTPase EngA [Thermaerobacter subterraneus DSM 13965] gi|313467912|gb|EFR63404.1| ribosome-associated GTPase EngA [Thermaerobacter subterraneus DSM 13965] Length = 454 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 14/158 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G +A GR NVGKSSL+N L+ + + S+ PG T+ + + Sbjct: 181 ETGEIAVAIVGRPNVGKSSLVNRLLGEERVV-VSDIPGTTRDAVDVL------WRRGERV 233 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K +V+ + L + R+ + C L++D R + D+ + + Sbjct: 234 FRFIDTAGLRRKSRVKDDVEFYSTLRTQRALARADVAC--LVLDARDPATEQDKRIAGMI 291 Query: 146 DKKAVSYQIVLTKIDKLS--PTTAQETLEKTKYLIRNY 181 ++ + + + K D ++ P TA + E L R Y Sbjct: 292 LEEGKACVLAVNKWDLVAKGPDTADQYREA---LYREY 326 >gi|225570488|ref|ZP_03779513.1| hypothetical protein CLOHYLEM_06589 [Clostridium hylemonae DSM 15053] gi|225160685|gb|EEG73304.1| hypothetical protein CLOHYLEM_06589 [Clostridium hylemonae DSM 15053] Length = 442 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 11/157 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS++N L+ + + S+ G T+ + + + + Sbjct: 178 PRIAIVGKPNVGKSSIVNKLLGEQRVI-VSDVAGTTRDAI------DTEIIHGGREYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKSKIKEELERYS--IIRTVTAVERADVVLVVIDAAEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 IV+ K D + +T+ + ++ +R + P Sbjct: 289 KGIIIVVNKWDAIEKN--DKTMREYEHRVRQVLSFMP 323 >gi|119505385|ref|ZP_01627459.1| predicted GTPase [marine gamma proteobacterium HTCC2080] gi|119458840|gb|EAW39941.1| predicted GTPase [marine gamma proteobacterium HTCC2080] Length = 472 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 19/129 (14%) Query: 21 IGLLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 I LP+A P + +A GR NVGKS+L+N L+ + + PG T+ + Sbjct: 159 IDALPQAAPADALNDPSIRVAVVGRPNVGKSTLVNRLLGEDRVV-VFDKPGTTRDSVYI- 216 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + A L+D G + ++ V+ + IV+ L + V LL+D Sbjct: 217 -----RYERHDQAYTLIDTAGVRRRKNVREVVEKFS--IVKTLKAINEAHVVILLMDAHE 269 Query: 133 GVKQIDQDV 141 G+ ++QD+ Sbjct: 270 GL--VEQDL 276 >gi|6655023|gb|AAD02940.2| GTP-binding protein Era [Bradyrhizobium japonicum] Length = 309 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 31/186 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V ++NN + LVD Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIV------IENN-AQIILVDT 70 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG +PK+ +D +W G + + L CV L+D + G ID++ + L Sbjct: 71 PGIF---SPKRRLDRAMVSTAWSG------AHDADLVCV--LLDAKTG---IDEEAEAIL 116 Query: 146 DKKA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 K A V++ +L I+K+ ++ L + P A +I +++ G++ LR Sbjct: 117 AKAASVNHDKILV-INKVDLVQREKLLALAQAANERMPFAKTFMI--AAISGDGVDDLRS 173 Query: 205 AILETI 210 + E + Sbjct: 174 TLAEMV 179 >gi|59800763|ref|YP_207475.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae FA 1090] gi|239998506|ref|ZP_04718430.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae 35/02] gi|240013631|ref|ZP_04720544.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae DGI18] gi|240016070|ref|ZP_04722610.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae FA6140] gi|240080212|ref|ZP_04724755.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae FA19] gi|240112425|ref|ZP_04726915.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae MS11] gi|240115165|ref|ZP_04729227.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae PID18] gi|240117449|ref|ZP_04731511.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae PID1] gi|240120701|ref|ZP_04733663.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae PID24-1] gi|240123005|ref|ZP_04735961.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae PID332] gi|240125257|ref|ZP_04738143.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae SK-92-679] gi|240127711|ref|ZP_04740372.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae SK-93-1035] gi|254493225|ref|ZP_05106396.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae 1291] gi|260441017|ref|ZP_05794833.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae DGI2] gi|268594365|ref|ZP_06128532.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae 35/02] gi|268596361|ref|ZP_06130528.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae FA19] gi|268598488|ref|ZP_06132655.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae MS11] gi|268600841|ref|ZP_06135008.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae PID18] gi|268603146|ref|ZP_06137313.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae PID1] gi|268681627|ref|ZP_06148489.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae PID332] gi|268683855|ref|ZP_06150717.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae SK-92-679] gi|268686096|ref|ZP_06152958.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae SK-93-1035] gi|291044349|ref|ZP_06570058.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae DGI2] gi|293399535|ref|ZP_06643688.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria gonorrhoeae F62] gi|59717658|gb|AAW89063.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090] gi|226512265|gb|EEH61610.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae 1291] gi|268547754|gb|EEZ43172.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae 35/02] gi|268550149|gb|EEZ45168.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae FA19] gi|268582619|gb|EEZ47295.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae MS11] gi|268584972|gb|EEZ49648.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae PID18] gi|268587277|gb|EEZ51953.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae PID1] gi|268621911|gb|EEZ54311.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae PID332] gi|268624139|gb|EEZ56539.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae SK-92-679] gi|268626380|gb|EEZ58780.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae SK-93-1035] gi|291011243|gb|EFE03239.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae DGI2] gi|291610104|gb|EFF39226.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria gonorrhoeae F62] gi|317163782|gb|ADV07323.1| ribosomal biogenesis GTPase [Neisseria gonorrhoeae TCDC-NG08107] Length = 313 Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|253689254|ref|YP_003018444.1| GTP-binding protein HSR1-related [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755832|gb|ACT13908.1| GTP-binding protein HSR1-related [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 291 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 15/138 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G++ VGKSSL N L + + N+ Q L F L + ++ V Sbjct: 37 PVIGIMGKTGVGKSSLCNTLFQGEVSPVSDNSACTRQALTF-------RLSSGQRSILFV 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--DK 147 D+PG G + ++ Y S + V L+ IDQ ++ + ++ Sbjct: 90 DLPGVGESEERDRDYAE------LYQSWLPRVDIVLWLLKADDRALAIDQHIYRTVIGER 143 Query: 148 KAVSYQIVLTKIDKLSPT 165 VL ++DKL P Sbjct: 144 YRDKVLFVLNQVDKLEPC 161 >gi|218245012|ref|YP_002370383.1| GTP-binding protein EngA [Cyanothece sp. PCC 8801] gi|257058036|ref|YP_003135924.1| GTP-binding protein EngA [Cyanothece sp. PCC 8802] gi|226741133|sp|B7K1S0|DER_CYAP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218165490|gb|ACK64227.1| small GTP-binding protein [Cyanothece sp. PCC 8801] gi|256588202|gb|ACU99088.1| small GTP-binding protein [Cyanothece sp. PCC 8802] Length = 452 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 22/155 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N L+ +N A S G T+ V +++N L+D Sbjct: 178 KVAIIGRPNVGKSSLLNALLG-ENRAIVSPISGTTRDAIDTV------IQHNEQTYRLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDKK 148 G KKNV+ + ++ RC V +ID GV D + + ++ Sbjct: 231 TAGI----RRKKNVEYGAEFFSINRAFKAIRRCDVVLFVIDAIDGVTDQDLKLADRIIEE 286 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 S +V+ K D ++K Y I Y T Sbjct: 287 GRSVVLVINKWD---------AVDKDSYTIYEYKT 312 >gi|22328152|ref|NP_201448.2| GTP binding / RNA binding [Arabidopsis thaliana] gi|17473914|gb|AAL38371.1| GTP-binding protein-like [Arabidopsis thaliana] gi|20259794|gb|AAM13244.1| GTP-binding protein-like [Arabidopsis thaliana] gi|332010835|gb|AED98218.1| GTP-binding protein Era [Arabidopsis thaliana] Length = 427 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 26/187 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G NVGKS+L N ++ +K ++ ++ P T+H L ++ M L Sbjct: 132 VAVVGMPNVGKSTLSNQMIGQK-ISIVTDKPQTTRHRILGICSSPEYQ--------MILY 182 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLID-CRH--GVKQIDQDVFSFL 145 D PG +K + ++++ + + + CV +L+D C+ ++++ ++ L Sbjct: 183 DTPG-----VIEKKMHRLDTMMMKNVRDAAINADCVVILVDACKTPTNIEEVLKEGLGDL 237 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +KK +V+ K D + P + LE + T EVIP S+ GIE +++ Sbjct: 238 EKKP-PMLLVMNKKDLIKPGEIAKKLEWYEKF-----TDVDEVIPVSAKYGHGIEDVKEW 291 Query: 206 ILETINY 212 IL + + Sbjct: 292 ILSKLPF 298 >gi|30017373|ref|NP_835170.1| large subunit GTPase 1 homolog [Mus musculus] gi|172044635|sp|Q3UM18|LSG1_MOUSE RecName: Full=Large subunit GTPase 1 homolog gi|27696806|gb|AAH43724.1| Large subunit GTPase 1 homolog (S. cerevisiae) [Mus musculus] gi|74147221|dbj|BAE27512.1| unnamed protein product [Mus musculus] gi|74179729|dbj|BAE22495.1| unnamed protein product [Mus musculus] Length = 644 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 369 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 418 Query: 86 MALVDMPG 93 + L D PG Sbjct: 419 LCLCDCPG 426 >gi|116491048|ref|YP_810592.1| GTPase [Oenococcus oeni PSU-1] gi|290890529|ref|ZP_06553604.1| hypothetical protein AWRIB429_0994 [Oenococcus oeni AWRIB429] gi|116091773|gb|ABJ56927.1| Predicted GTPase [Oenococcus oeni PSU-1] gi|290479925|gb|EFD88574.1| hypothetical protein AWRIB429_0994 [Oenococcus oeni AWRIB429] Length = 282 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 G NVGKS+ IN L KN+ART+N PG T L Sbjct: 126 GTPNVGKSTFINHLAG-KNIARTANKPGVTHFL 157 >gi|328705372|ref|XP_003242777.1| PREDICTED: protein peanut-like isoform 3 [Acyrthosiphon pisum] Length = 608 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 26/155 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN---NLPAMALVDMP 92 GRS +GKS+LIN + + P V + LK NL ++ +VD P Sbjct: 226 GRSGLGKSTLINTMFLADIYGKEHPGPSLRVGKTVRVETNRCMLKEKGVNL-SLTVVDTP 284 Query: 93 GYGYARAPKKNVDSWGGLI-------VRYLSERSTLR-----------CVYLLIDCRHGV 134 G+G A N D W ++ YL+ S + C+Y L HG+ Sbjct: 285 GFGDA---VDNSDCWQPVLEYIESRYEEYLNAESRVNRKVQHDSRVHCCLYFLESNSHGM 341 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 +D + L K V+ +++K D ++P E Sbjct: 342 TPLDVEFMQRLHDK-VNIIPIISKADTMTPDEVTE 375 >gi|288803890|ref|ZP_06409315.1| ribosome-associated GTPase EngA [Prevotella melaninogenica D18] gi|288333655|gb|EFC72105.1| ribosome-associated GTPase EngA [Prevotella melaninogenica D18] Length = 437 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 25/199 (12%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLN 69 L+ VPE + P A GR N GKSS+IN + +A T+ T++ Sbjct: 163 LKDVPEEAV--DQDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTK 220 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F DF LVD G ++++ + ++R + L++D Sbjct: 221 FGF--DFY----------LVDTAGIRRKNKVSEDLEFYS--VMRSIRSIENSEVCILMLD 266 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHP 186 G++ D ++F + + S +V+ K D L Q+ ++ + IR P Sbjct: 267 ATRGIEAQDMNIFQLIQRNNKSLVVVVNKWD-LVEDKNQKVIDTFENAIRKRMAPFVDFP 325 Query: 187 EVIPTSSVKRKGIEVLRKA 205 + ++ K++ +VL A Sbjct: 326 IIFASALTKQRIFKVLETA 344 >gi|298528962|ref|ZP_07016365.1| tRNA modification GTPase TrmE [Desulfonatronospira thiodismutans ASO3-1] gi|298510398|gb|EFI34301.1| tRNA modification GTPase TrmE [Desulfonatronospira thiodismutans ASO3-1] Length = 466 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 27/177 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA--LV 89 + +GR N GKSSL+N L+ R+ A ++ PG T +D+ NL + LV Sbjct: 231 VVLAGRVNAGKSSLMNALLGRER-AIVTSIPGTT--------RDYLEEAINLDGLPVRLV 281 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R + ++ G R L RS L C+ L++D D D+ + Sbjct: 282 DTAGR---RPTRDKIEMMGLETGRQLISRSDL-CI-LVLDAGQEPAPEDLDIL-----EE 331 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +S ++ ++K Q+ + T +++ +++ TS+ G+E L +AI Sbjct: 332 ISPGKLVLAVNK------QDLVSGTPGWVQDLKDKGLDLVHTSATLGHGLENLTRAI 382 >gi|187934744|ref|YP_001887658.1| GTP-binding protein [Clostridium botulinum B str. Eklund 17B] gi|187722897|gb|ACD24118.1| GTP-binding protein [Clostridium botulinum B str. Eklund 17B] Length = 395 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 PKA I+ G+ N GKSSLIN L N+ L+ S+ PG T Sbjct: 5 PKANRLHISIFGKRNAGKSSLINALTNQP-LSLVSDTPGTT 44 >gi|111115337|ref|YP_709955.1| GTP-binding protein EngA [Borrelia afzelii PKo] gi|122956350|sp|Q0SMZ9|DER_BORAP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|110890611|gb|ABH01779.1| GTP-binding protein [Borrelia afzelii PKo] Length = 433 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 13/132 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF--SNLKNNLPAMAL 88 ++ G+ N GKS+LIN L + ++ S+ PG T +DF + L N + Sbjct: 175 KVGIIGKPNSGKSTLINYLSGNE-ISIVSDKPGTT--------RDFIKTKLTRNGKVFEI 225 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + + R L + V+LLID + + D+ + ++ KK Sbjct: 226 IDTAGIRRRARVNEIVEYYS--VNRALKVIDMVDIVFLLIDVKEELTSQDKKIAHYVTKK 283 Query: 149 AVSYQIVLTKID 160 IV +K D Sbjct: 284 GKGIIIVFSKWD 295 >gi|91203327|emb|CAJ72966.1| similar to GTP-binding protein [Candidatus Kuenenia stuttgartiensis] Length = 446 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 16/154 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ N GKS+LIN L RK S PG T+ D +N +A +D Sbjct: 180 KMAIVGKRNAGKSTLINTLA-RKQRVIVSEVPGTTRD-----SIDVKFEMDNKQFLA-ID 232 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDKK 148 G K +++ + + R +ERS R V LID + +D+ + +++D + Sbjct: 233 TAGVRKKSQVKDSIEFYS--MAR--AERSIRRADVVLFLIDATLKISDVDKKLGAYIDLE 288 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 IV+ K D + ET E +Y+ ++ P Sbjct: 289 RKPCVIVINKWDLVK---GIETEEYHEYINKSLP 319 >gi|325499140|gb|EGC96999.1| selenocysteinyl-tRNA-specific translation factor [Escherichia fergusonii ECD227] Length = 615 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAV-SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPTLTVALTKADRVDEARVGEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 DAKLFVTAATEGRGIDALREHLLQ 163 >gi|312871302|ref|ZP_07731400.1| tRNA modification GTPase TrmE [Lactobacillus iners LEAF 3008A-a] gi|312874855|ref|ZP_07734874.1| tRNA modification GTPase TrmE [Lactobacillus iners LEAF 2053A-b] gi|311089600|gb|EFQ48025.1| tRNA modification GTPase TrmE [Lactobacillus iners LEAF 2053A-b] gi|311093316|gb|EFQ51662.1| tRNA modification GTPase TrmE [Lactobacillus iners LEAF 3008A-a] Length = 461 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 26/175 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L +++ A +N G T+ +++ +LK L + L+D Sbjct: 228 AIVGRPNVGKSSLLNYL-SKEEKAIVTNIAGTTRD----TLEEYVSLKGIL--LKLIDTA 280 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVS 151 G R V+ G + R + V LLI+ + + DQ + DKK + Sbjct: 281 GI---RQTDDIVEKIG--VERSKRAITESDLVLLLINSSEELTEEDQKLLELTQDKKRI- 334 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I+L K D+++ T ++ ++K I + P ++ S +K+K + L +AI Sbjct: 335 --IILNKADQVAKITKKD-IQK----ITDSP-----IVTISVLKKKNMIGLEEAI 377 >gi|259090125|pdb|3A1T|A Chain A, Crystal Structue Of The Cytosolic Domain Of T. Maritima Feob Iron Iransporter In Gdp Form Ii gi|259090126|pdb|3A1U|A Chain A, Crystal Structue Of The Cytosolic Domain Of T. Maritima Feob Iron Iransporter In Gmppnp Form gi|259090127|pdb|3A1U|B Chain B, Crystal Structue Of The Cytosolic Domain Of T. Maritima Feob Iron Iransporter In Gmppnp Form gi|259090128|pdb|3A1V|A Chain A, Crystal Structue Of The Cytosolic Domain Of T. Maritima Feob Iron Iransporter In Apo Form gi|259090129|pdb|3A1V|B Chain B, Crystal Structue Of The Cytosolic Domain Of T. Maritima Feob Iron Iransporter In Apo Form Length = 258 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 37/185 (20%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT--QHLNFFVPKDFSNLKNNLPAMALV 89 +A +G NVGK+SL N L K +N PG T + F K ++ + L+ Sbjct: 8 VALAGCPNVGKTSLFNALTGTKQY--VANWPGVTVEKKEGVFTYKGYT--------INLI 57 Query: 90 DMPG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D+PG GY+ +K I R + V L+ D + +Q ++ L+ Sbjct: 58 DLPGTYSLGYSSIDEK--------IARDYLLKGDADLVILVADSVNP----EQSLYLLLE 105 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP---TSSVKRKGIEVLR 203 + +++L TA + +KT I Y IP TSSV +G+E L+ Sbjct: 106 ILEMEKKVILA-------MTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELK 158 Query: 204 KAILE 208 + I+E Sbjct: 159 EKIVE 163 >gi|269791764|ref|YP_003316668.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099399|gb|ACZ18386.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 398 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 PKA IA GR N GKSSLIN L ++ A S+ PG T Sbjct: 4 PKANRLHIAIFGRRNAGKSSLINALTG-QDAALVSSEPGTT 43 >gi|226322424|ref|ZP_03797942.1| hypothetical protein COPCOM_00195 [Coprococcus comes ATCC 27758] gi|225209146|gb|EEG91500.1| hypothetical protein COPCOM_00195 [Coprococcus comes ATCC 27758] Length = 415 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 14/140 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A I GR N GKSS+IN + +NLA S+ G T VPK L L Sbjct: 7 PSADRVHIGIFGRRNAGKSSIINAITG-QNLAIVSDVLGTTTD---PVPKAMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCRHGVKQIDQDVFS 143 + ++D PG ++ G L V+ + + L+ID G+ D + Sbjct: 61 PVVIIDTPGL-------DDIGELGELRVKKAYQILNKTDIAVLVIDASLGMTPEDLSILK 113 Query: 144 FLDKKAVSYQIVLTKIDKLS 163 + K + Y +V K D S Sbjct: 114 KIQDKKIPYVVVKNKSDLCS 133 >gi|148665325|gb|EDK97741.1| large subunit GTPase 1 homolog (S. cerevisiae), isoform CRA_b [Mus musculus] Length = 643 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 369 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 418 Query: 86 MALVDMPG 93 + L D PG Sbjct: 419 LCLCDCPG 426 >gi|74203215|dbj|BAE26280.1| unnamed protein product [Mus musculus] Length = 645 Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 370 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 419 Query: 86 MALVDMPG 93 + L D PG Sbjct: 420 LCLCDCPG 427 >gi|296875953|ref|ZP_06900012.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC 15912] gi|312868488|ref|ZP_07728688.1| ribosome biogenesis GTPase Der [Streptococcus parasanguinis F0405] gi|322390089|ref|ZP_08063624.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC 903] gi|296433028|gb|EFH18816.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC 15912] gi|311096233|gb|EFQ54477.1| ribosome biogenesis GTPase Der [Streptococcus parasanguinis F0405] gi|321143216|gb|EFX38659.1| ribosome-associated GTPase EngA [Streptococcus parasanguinis ATCC 903] Length = 436 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 19/158 (12%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + P I FS GR NVGKSSLIN ++ + S G T+ + F++ Sbjct: 169 EENPDIIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDADGQ- 223 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G + +N + + ++R + V ++I+ G+++ D+ + Sbjct: 224 -EFTMIDTAGMRKSGKIYENTEKYS--VMRAMRAIDRSDVVLMVINAEEGIREYDKRIAG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 F + IV+ K D T+EK + ++ + Sbjct: 281 FAHEAGKGMIIVVNKWD---------TIEKDNHTMKQW 309 >gi|258541745|ref|YP_003187178.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01] gi|256632823|dbj|BAH98798.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01] gi|256635880|dbj|BAI01849.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-03] gi|256638935|dbj|BAI04897.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-07] gi|256641989|dbj|BAI07944.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-22] gi|256645044|dbj|BAI10992.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-26] gi|256648099|dbj|BAI14040.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-32] gi|256651152|dbj|BAI17086.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654143|dbj|BAI20070.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-12] Length = 300 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 66/170 (38%), Gaps = 17/170 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G N GKS+L+N + A+ S + Q F V L + LVD P Sbjct: 12 ALVGAPNAGKSTLLNRMAG----AKLSIVSPKAQTTRFRV---LGILMRGHSQILLVDTP 64 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G P++ +D ++ + LL+D R G+ + Q + L + Sbjct: 65 GIFR---PRRKLDR--AMVAAAWTGAEDADITLLLVDARSGLTEAVQTIIERLAETKRKV 119 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +VL K D L P TA L T + P H V S+ G+E L Sbjct: 120 WLVLNKTD-LVPATA--LLPLTASITEKLPVEH--VFMVSARTGNGVEDL 164 >gi|237712743|ref|ZP_04543224.1| GTP-binding protein EngA [Bacteroides sp. D1] gi|262408120|ref|ZP_06084667.1| ribosome-associated GTPase EngA [Bacteroides sp. 2_1_22] gi|293369492|ref|ZP_06616071.1| ribosome-associated GTPase EngA [Bacteroides ovatus SD CMC 3f] gi|294644223|ref|ZP_06721993.1| ribosome-associated GTPase EngA [Bacteroides ovatus SD CC 2a] gi|294808599|ref|ZP_06767339.1| ribosome-associated GTPase EngA [Bacteroides xylanisolvens SD CC 1b] gi|298480163|ref|ZP_06998361.1| ribosome-associated GTPase EngA [Bacteroides sp. D22] gi|229447220|gb|EEO53011.1| GTP-binding protein EngA [Bacteroides sp. D1] gi|262353672|gb|EEZ02765.1| ribosome-associated GTPase EngA [Bacteroides sp. 2_1_22] gi|292635377|gb|EFF53890.1| ribosome-associated GTPase EngA [Bacteroides ovatus SD CMC 3f] gi|292640433|gb|EFF58681.1| ribosome-associated GTPase EngA [Bacteroides ovatus SD CC 2a] gi|294444198|gb|EFG12925.1| ribosome-associated GTPase EngA [Bacteroides xylanisolvens SD CC 1b] gi|295088054|emb|CBK69577.1| ribosome-associated GTPase EngA [Bacteroides xylanisolvens XB1A] gi|298273444|gb|EFI15007.1| ribosome-associated GTPase EngA [Bacteroides sp. D22] Length = 437 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 21/151 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEERNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D GV+ D ++FS Sbjct: 226 --YLVDTAGIRKKNKVNEDLEYYS--VIRSIRAIEGSDVCILMLDATRGVESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTT--AQETLEK 173 + K +V+ K D + + Q+T E+ Sbjct: 282 IQKNQKGLVVVINKWDLVEDKSVKVQKTFEE 312 >gi|329725422|gb|EGG61905.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU144] Length = 436 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ + ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEERVI-VSNVAGTTRDA---IDTEYSYDGQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS V ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERS--EVVLVVIDAEQGIIEQDKRVAGYAHEEGKAIVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRN 180 + K D + + +T++K +RN Sbjct: 293 VNKWDTVEKDS--KTMKKFTDDVRN 315 >gi|317490529|ref|ZP_07949007.1| GTP-binding protein Era [Eggerthella sp. 1_3_56FAA] gi|316910380|gb|EFV32011.1| GTP-binding protein Era [Eggerthella sp. 1_3_56FAA] Length = 307 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 16/143 (11%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P +G K+G + GR N GKS+LIN ++ +K +A TSN T+H + + Sbjct: 6 PAVGDSFKSGF--VTLVGRPNAGKSTLINAIMGKK-IAITSNTAQTTRH------RFRAA 56 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWG-GLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 L + LVD PG K D+ G L L + V L+D V Sbjct: 57 LTREGFQLILVDTPGL------HKPHDALGEELNTSALKALEDVDVVAFLVDASKPVGTG 110 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ V + L + +VL+KID Sbjct: 111 DEWVAAQLKRARSKKILVLSKID 133 >gi|313683277|ref|YP_004061015.1| ribosome-associated GTPase enga [Sulfuricurvum kujiense DSM 16994] gi|313156137|gb|ADR34815.1| ribosome-associated GTPase EngA [Sulfuricurvum kujiense DSM 16994] Length = 511 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 10/129 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N L+ ++ + S+ G T P D ++ N + +D Sbjct: 242 VAIIGRVNVGKSSLLNALLG-EDRSVVSSVAGTT-----IDPID-ETVEYNDKKITFIDT 294 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R ++ + ++R T L++D +D+ + F+DK ++ Sbjct: 295 AGI-RKRGKILGIEKYA--LMRTEEMLETADIALLVLDASQPFMDLDEKIAGFVDKNRLA 351 Query: 152 YQIVLTKID 160 IVL K D Sbjct: 352 CLIVLNKWD 360 >gi|303239164|ref|ZP_07325693.1| small GTP-binding protein [Acetivibrio cellulolyticus CD2] gi|302593209|gb|EFL62928.1| small GTP-binding protein [Acetivibrio cellulolyticus CD2] Length = 407 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 16/133 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR N GKS+LIN L +++A SN PG T V K L L + ++D Sbjct: 12 IAIFGRRNAGKSTLINALTG-QDIAVVSNVPGTTTDP---VYKTMELLP--LGPVVIIDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G +V G L + Y R T ++ ++D G+ + D + + Sbjct: 66 AGI-------DDVGDLGNLRMEKTYDVLRKTNFAIF-VVDADEGITEFDIKFIEEIKSRE 117 Query: 150 VSYQIVLTKIDKL 162 V+ VL K DK+ Sbjct: 118 VAVVAVLNKSDKI 130 >gi|27468081|ref|NP_764718.1| GTP-binding protein EngA [Staphylococcus epidermidis ATCC 12228] gi|57867002|ref|YP_188620.1| GTP-binding protein EngA [Staphylococcus epidermidis RP62A] gi|251810897|ref|ZP_04825370.1| GTP-binding protein EngA [Staphylococcus epidermidis BCM-HMP0060] gi|282876093|ref|ZP_06284960.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis SK135] gi|293366558|ref|ZP_06613235.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis M23864:W2(grey)] gi|37999682|sp|Q8CP62|DER_STAES RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71151866|sp|Q5HP70|DER_STAEQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|27315626|gb|AAO04760.1|AE016747_257 GTP binding protein [Staphylococcus epidermidis ATCC 12228] gi|57637660|gb|AAW54448.1| GTP-binding protein, Era/TrmE family [Staphylococcus epidermidis RP62A] gi|251805577|gb|EES58234.1| GTP-binding protein EngA [Staphylococcus epidermidis BCM-HMP0060] gi|281295118|gb|EFA87645.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis SK135] gi|291319327|gb|EFE59696.1| ribosome-associated GTPase EngA [Staphylococcus epidermidis M23864:W2(grey)] gi|329735360|gb|EGG71652.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU045] gi|329737420|gb|EGG73674.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU028] Length = 436 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ + ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEERVI-VSNVAGTTRDA---IDTEYSYDGQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS V ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERS--EVVLVVIDAEQGIIEQDKRVAGYAHEEGKAIVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRN 180 + K D + + +T++K +RN Sbjct: 293 VNKWDTVEKDS--KTMKKFTDDVRN 315 >gi|282850278|ref|ZP_06259657.1| GTP-binding protein Era [Veillonella parvula ATCC 17745] gi|282579771|gb|EFB85175.1| GTP-binding protein Era [Veillonella parvula ATCC 17745] Length = 299 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ K +A S+ T++ V D S + +D Sbjct: 12 VAVVGRPNVGKSTLINALIGDK-IAIVSDKAQTTRNRIICVYTDESK------QIVFMDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ + V ++ D + L + V Sbjct: 65 PG---VHKPKHKLGEF--MVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQLKRVKVP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAILET 209 +V+ KID L +E LE I +Y A+P VIP S+ ++ + + K + ET Sbjct: 120 VFLVVNKIDTLK---KEELLEA----IVSYQDAYPFAGVIPISAKDKENLSEILKVLEET 172 Query: 210 I 210 + Sbjct: 173 L 173 >gi|270291293|ref|ZP_06197515.1| ribosome-associated GTPase EngA [Pediococcus acidilactici 7_4] gi|304385042|ref|ZP_07367388.1| ribosome-associated GTPase EngA [Pediococcus acidilactici DSM 20284] gi|270280139|gb|EFA25975.1| ribosome-associated GTPase EngA [Pediococcus acidilactici 7_4] gi|304329236|gb|EFL96456.1| ribosome-associated GTPase EngA [Pediococcus acidilactici DSM 20284] Length = 435 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 11/133 (8%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSL+N ++ + + S+ G T+ + F+ +N +V Sbjct: 175 IRFSLIGRPNVGKSSLVNAILGEQRVI-VSDIAGTTRDA---IDTRFT---SNGDEFVMV 227 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G +N + + ++R + V ++++ G+++ D+ + + + Sbjct: 228 DTAGMRKKGKIYENTERYS--VMRAMKAIDNSNVVLVVLNAEEGIREQDKRIAGYAHEAG 285 Query: 150 VSYQIVLTKIDKL 162 + IV+ K DKL Sbjct: 286 RAIVIVVNKWDKL 298 >gi|269798051|ref|YP_003311951.1| GTP-binding protein Era [Veillonella parvula DSM 2008] gi|269094680|gb|ACZ24671.1| GTP-binding protein Era [Veillonella parvula DSM 2008] Length = 299 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ K +A S+ T++ V D S + +D Sbjct: 12 VAVVGRPNVGKSTLINALIGDK-IAIVSDKAQTTRNRIICVYTDESK------QIVFMDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ + V ++ D + L + V Sbjct: 65 PG---VHKPKHKLGEF--MVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQLKRVKVP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAILET 209 +V+ KID L +E LE I +Y A+P VIP S+ ++ + + K + ET Sbjct: 120 VFLVVNKIDTLK---KEELLEA----IVSYQDAYPFAGVIPISAKDKENLSEILKVLEET 172 Query: 210 I 210 + Sbjct: 173 L 173 >gi|198274784|ref|ZP_03207316.1| hypothetical protein BACPLE_00943 [Bacteroides plebeius DSM 17135] gi|198272231|gb|EDY96500.1| hypothetical protein BACPLE_00943 [Bacteroides plebeius DSM 17135] Length = 265 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 17/191 (8%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +G K G P +A G +N GKS+L+N L+N + A S+ G T+ V +D NL Sbjct: 7 VGNALKNGVP-VAIVGETNAGKSTLLNALLNEER-AIVSDIHGTTRD----VIEDTMNLG 60 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +D G R ++S G I R + V +ID +Q Q Sbjct: 61 G--ITFRFIDTAGI---RETTDTIESLG--IERSFQKLDQADIVLWVIDATCAEEQYRQL 113 Query: 141 VFSFLDK-KAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 L + K IV K D LS ++A + L + K + + P V+ S+ +++ Sbjct: 114 ADKILPRCKNKHLVIVFNKADLLSSADSSADKQLARLKAALPDLPE-DACVLSLSAKQKE 172 Query: 198 GIEVLRKAILE 208 G+ L+K +++ Sbjct: 173 GLSQLQKQLVD 183 >gi|123965453|ref|YP_001010534.1| tRNA modification GTPase TrmE [Prochlorococcus marinus str. MIT 9515] gi|166234807|sp|A2BUG6|MNME_PROM5 RecName: Full=tRNA modification GTPase mnmE gi|123199819|gb|ABM71427.1| putative thiophen / furan oxidation protein [Prochlorococcus marinus str. MIT 9515] Length = 461 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 1/37 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 IA G++NVGKSSL+N+L ++K A +N PG T+ + Sbjct: 230 IALIGKTNVGKSSLLNLL-SKKEKAIVTNIPGTTRDM 265 >gi|81428627|ref|YP_395627.1| GTP-binding protein EngA [Lactobacillus sakei subsp. sakei 23K] gi|123564226|sp|Q38WW3|DER_LACSS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78610269|emb|CAI55318.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K] Length = 436 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 12/159 (7%) Query: 24 LPKAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 L + I FS GR NVGKSSL+N ++ +++ S G T+ D + Sbjct: 167 LEEEDDDSIKFSLIGRPNVGKSSLVNAML-KEDRVIVSQIEGTTRD-----AIDTKFMAE 220 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 N ++D G +N + + ++R L V ++++ G+++ D+ V Sbjct: 221 NNQEFTMIDTAGIRKRGKVYENTEKYA--VMRALRAIDRSDVVLVVLNAEEGIREQDKKV 278 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + + IV+ K D L T+++ + IRN Sbjct: 279 AGYAHEAGRGIIIVVNKWDTLEKDN--HTMKEFEDHIRN 315 >gi|116511562|ref|YP_808778.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris SK11] gi|125624594|ref|YP_001033077.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris MG1363] gi|123320527|sp|Q030L6|DER_LACLS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166198724|sp|A2RM49|DER_LACLM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|116107216|gb|ABJ72356.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11] gi|124493402|emb|CAL98376.1| putative phosphoglycerate dehydrogenase [Lactococcus lactis subsp. cremoris MG1363] gi|300071385|gb|ADJ60785.1| GTP-binding protein EngA [Lactococcus lactis subsp. cremoris NZ9000] Length = 436 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 14/151 (9%) Query: 32 IAFS--GRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 I FS GR NVGKSSLIN IL + +A R FV + + Sbjct: 175 IKFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTHFVDSEDQEF-------VM 227 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + +N + + + +RS + V ++I+ G+++ D + F + Sbjct: 228 IDTAGMRKSGKIYENTEKYSVMRAMRAIDRSDI--VLMVINAEEGIREYDMRIAGFAHEA 285 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 IV+ K D L +T++K + IR Sbjct: 286 GKGILIVVNKWDTLEKD--NDTMKKFELEIR 314 >gi|297588067|ref|ZP_06946711.1| tRNA modification GTPase TrmE [Finegoldia magna ATCC 53516] gi|297574756|gb|EFH93476.1| tRNA modification GTPase TrmE [Finegoldia magna ATCC 53516] Length = 452 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 30/178 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVDMPGY 94 G+ NVGKSSL+N L+ ++N A ++ PG T+ + ++ D +LK N D G Sbjct: 224 GKPNVGKSSLLNALL-KENRAIVTDIPGTTRDVIEEYIDLDGISLKIN-------DTAGI 275 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVSYQ 153 R + V+ G + + +S S + + D D+ + + DKK++ Sbjct: 276 ---RDTEDIVEKIG--VEKSVSFISDSDLIIAIFDSSREFDDEDRKILDLIRDKKSI--- 327 Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++L KID E LE EVI S + +GIE L I+E N Sbjct: 328 VLLNKIDLDGGFDFDENLEGI------------EVIRISIKQNEGIEDLENKIIEMFN 373 >gi|224532340|ref|ZP_03672972.1| GTP-binding protein [Borrelia valaisiana VS116] gi|224511805|gb|EEF82211.1| GTP-binding protein [Borrelia valaisiana VS116] Length = 279 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 10/58 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 G NVGKSS+IN+L RK+ A+ +N PG T+++ + N L DMPG Sbjct: 124 GVPNVGKSSIINLLSGRKS-AKVANKPGYTKNIQIVKINEEIN---------LFDMPG 171 >gi|156848824|ref|XP_001647293.1| hypothetical protein Kpol_1002p83 [Vanderwaltozyma polyspora DSM 70294] gi|156117978|gb|EDO19435.1| hypothetical protein Kpol_1002p83 [Vanderwaltozyma polyspora DSM 70294] Length = 645 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 14/85 (16%) Query: 13 IFLRGVPEIGL---LPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +FL P L LP P +I G NVGKSS IN LV K ++ S+ PG+T+H Sbjct: 323 LFLSRAPAEPLTTPLPGQDPLIQIGLVGYPNVGKSSTINSLVGAKKVS-VSSTPGKTKHF 381 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPG 93 D ++ L D PG Sbjct: 382 QTIKLSD---------SVMLCDCPG 397 >gi|51480456|gb|AAH80306.1| Lsg1 protein [Mus musculus] Length = 572 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 297 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 346 Query: 86 MALVDMPG 93 + L D PG Sbjct: 347 LCLCDCPG 354 >gi|257898848|ref|ZP_05678501.1| GTP-binding protein engA [Enterococcus faecium Com15] gi|257836760|gb|EEV61834.1| GTP-binding protein engA [Enterococcus faecium Com15] Length = 436 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 16/154 (10%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + + S+ G T+ D + N ++ Sbjct: 175 IKFSLIGRPNVGKSSLINAILGEERVI-VSDIEGTTRD-----AIDTHFVSENGQKFLMI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G +N + + + +RS + V ++++ G+++ D+ V + + Sbjct: 229 DTAGMRKRGKVYENTEKYSVMRAMRAIDRSDI--VLMVLNAEEGIREQDKRVAGYAHEAG 286 Query: 150 VSYQIVLTKIDKLSPTT------AQETLEKTKYL 177 IV+ K D + T QE ++ +YL Sbjct: 287 RGIIIVVNKWDLVKKETNTMRDFEQEIRDEFRYL 320 >gi|116072006|ref|ZP_01469274.1| tRNA modification GTPase [Synechococcus sp. BL107] gi|116065629|gb|EAU71387.1| tRNA modification GTPase [Synechococcus sp. BL107] Length = 451 Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 13/138 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N L +R+ A + PG T+ L + + + +P + L+D Sbjct: 225 VALVGRPNVGKSSLLNRL-SRRERAIVTELPGTTRDL-----LESEIVLDGVP-ITLMDT 277 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G RA V+ G I R + V L++D G + D + + + AV Sbjct: 278 AGI---RATNDAVEQLG--IARSEEALMSADLVLLIVDGHAGWTETDAQLLARI-PNAVP 331 Query: 152 YQIVLTKIDKLSPTTAQE 169 +V K D P +E Sbjct: 332 RVVVANKSDLDGPPLPRE 349 >gi|212696217|ref|ZP_03304345.1| hypothetical protein ANHYDRO_00753 [Anaerococcus hydrogenalis DSM 7454] gi|212676846|gb|EEB36453.1| hypothetical protein ANHYDRO_00753 [Anaerococcus hydrogenalis DSM 7454] Length = 442 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 13/150 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 IA G+ N GKSSL+N L+N + + T A ++ ++ KD NN L+D Sbjct: 182 IAIIGKPNAGKSSLVNHLLNEERMIVTDIAGTTRDAIDTYWQYKD-----NN---YVLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G N++ + R + LID GV + D + + K Sbjct: 234 TAGLRRKNKVSDNIEYYANQ--RTFDAVDSSEICLFLIDATVGVTEQDTKIAGYAHNKRK 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + I + K DK+ T T+ + IRN Sbjct: 292 AIIIAVNKWDKVEKET--NTMRNMEREIRN 319 >gi|170018180|ref|YP_001723134.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli ATCC 8739] gi|218697308|ref|YP_002404975.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli 55989] gi|300902788|ref|ZP_07120741.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 84-1] gi|301304647|ref|ZP_07210756.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 124-1] gi|169753108|gb|ACA75807.1| selenocysteine-specific translation elongation factor [Escherichia coli ATCC 8739] gi|218354040|emb|CAV00553.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli 55989] gi|300405165|gb|EFJ88703.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 84-1] gi|300840125|gb|EFK67885.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 124-1] gi|315254123|gb|EFU34091.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 85-1] gi|324116530|gb|EGC10447.1| selenocysteine-specific translation elongation protein [Escherichia coli E1167] Length = 614 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|25143545|ref|NP_740788.1| hypothetical protein C53H9.2 [Caenorhabditis elegans] gi|18250215|gb|AAL65781.1|AF003143_3 Hypothetical protein C53H9.2b [Caenorhabditis elegans] Length = 385 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A P + G NVGKSS IN L K ++ S PG+T+H + D + P Sbjct: 125 PSAKPVMVGMVGYPNVGKSSTINKLAGGKKVS-VSATPGKTRHFQ-TIHIDSQLCLCDCP 182 Query: 85 AMALVDMPGYGYARA 99 + MP + + R+ Sbjct: 183 GLV---MPSFSFGRS 194 >gi|70728454|ref|YP_258203.1| GTP-binding protein Era [Pseudomonas fluorescens Pf-5] gi|123657841|sp|Q4KHT0|ERA_PSEF5 RecName: Full=GTPase Era gi|68342753|gb|AAY90359.1| GTP-binding protein Era [Pseudomonas fluorescens Pf-5] Length = 300 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 12 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGAIQAIYVD 63 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG + N RY+++ ++ L+ V ++I K D+D + Sbjct: 64 TPGMHKSNEKALN---------RYMNKTASAALKDVDVVIFVVDRTKWTDEDQLVLERVQ 114 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V ++L K D++ E + +L P A E++P S+ + +E L I Sbjct: 115 YVQGPVILAINKTDRIEDKA--ELMPHLTWLQEQLPNA--EIVPVSAQQGHNLEALEGLI 170 >gi|323965988|gb|EGB61431.1| selenocysteine-specific translation elongation protein [Escherichia coli M863] gi|327251252|gb|EGE62945.1| selenocysteine-specific translation elongation factor [Escherichia coli STEC_7v] Length = 614 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|312381237|gb|EFR27029.1| hypothetical protein AND_06494 [Anopheles darlingi] Length = 1202 Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 27/139 (19%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFSNLKNNL 83 G + GK+ +++ L R+ + A G TQ + VP K F++L+ L Sbjct: 658 GHVDTGKTKILDKL--RRTNVQDGEAGGITQQIGATNVPAENIKEQTKFVKGFADLQFRL 715 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + ++D PG+ +S+ L R S L++D HG++ + + Sbjct: 716 PGLLIIDTPGH----------ESFSNLRSR---GSSLCDIAILVVDIMHGLEPQTLESIN 762 Query: 144 FLDKKAVSYQIVLTKIDKL 162 L K + + L KID+L Sbjct: 763 LLKSKKTPFVVALNKIDRL 781 >gi|296224887|ref|XP_002758255.1| PREDICTED: large subunit GTPase 1 homolog [Callithrix jacchus] Length = 658 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|225175916|ref|ZP_03729908.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1] gi|225168504|gb|EEG77306.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1] Length = 419 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 P+ IA G+ N GKSSLIN L N +++A S+ PG T Sbjct: 5 PRGSRLHIAIFGKRNAGKSSLINALTN-QDIALVSSVPGTT 44 >gi|224476369|ref|YP_002633975.1| ribosomal biogenesis GTPase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420976|emb|CAL27790.1| putative GTPase [Staphylococcus carnosus subsp. carnosus TM300] Length = 289 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 14/73 (19%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLK 80 GL P+A I G NVGKS+LIN L N K +A+T N PG T+ + V K Sbjct: 115 GLKPRAIRAMIV--GIPNVGKSTLINKLAN-KAIAKTGNTPGVTKQQQWIKVGK------ 165 Query: 81 NNLPAMALVDMPG 93 ++ L+D PG Sbjct: 166 ----SLQLLDTPG 174 >gi|150399398|ref|YP_001323165.1| selenocysteine-specific translation elongation factor [Methanococcus vannielii SB] gi|150012101|gb|ABR54553.1| selenocysteine-specific translation elongation factor [Methanococcus vannielii SB] Length = 468 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 38/177 (21%), Positives = 71/177 (40%), Gaps = 15/177 (8%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G + GK++L +L + + P +Q + FS+ K + LVD PG+ Sbjct: 12 GHIDHGKTTLSKVLTEIASTSALDKLP-ESQKRGITIDIGFSSFKLENYRVTLVDSPGHA 70 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 LI +S + +++D + G K + LD + +V Sbjct: 71 -------------DLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIPTIVV 117 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTSSVKRKGIEVLRKAILETIN 211 +TK+D +P T + ++++ +IP S+ GI L+ I +T+N Sbjct: 118 MTKVDNANPDEINRTKLFMQTILKSTKNLKESLIIPISAKTDFGISELKNTIFKTLN 174 >gi|119598441|gb|EAW78035.1| large subunit GTPase 1 homolog (S. cerevisiae), isoform CRA_b [Homo sapiens] Length = 513 Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|320178150|gb|EFW53128.1| Selenocysteine-specific translation elongation factor [Shigella boydii ATCC 9905] Length = 614 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|316973592|gb|EFV57160.1| putative elongation factor Tu GTP binding domain protein [Trichinella spiralis] Length = 1107 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 27/145 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKD-----------FS 77 P I G + GK+ +++ + R + S A G TQ + FVP++ F Sbjct: 519 PVICVLGHVDTGKTKILDKI--RHTHVQDSEAGGITQQIGATFVPREALVEQTKMVKGFD 576 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 LP + ++D PG+ +S+ L R S L++D HG++ Sbjct: 577 GESLQLPGLLIIDTPGH----------ESFSNLRSRG---SSLCDIAVLVVDIMHGLEMQ 623 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL 162 + + L ++ + L K+D+L Sbjct: 624 TIESINLLKQRKTPCVVALNKVDRL 648 >gi|303234512|ref|ZP_07321149.1| selenocysteine-specific translation elongation factor [Finegoldia magna BVS033A4] gi|302494346|gb|EFL54115.1| selenocysteine-specific translation elongation factor [Finegoldia magna BVS033A4] Length = 625 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 121 LRCVYLLIDCRHGV--KQIDQ-DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 + + L IDC+ GV + ++ D+ FL+K +VLTK D + ++T+E+ K L Sbjct: 77 MDMILLCIDCKEGVMPQTVEHLDILRFLNK--TEGIVVLTKRDLATDEETEKTIEQVKEL 134 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + S+ ++GI+ L + I Sbjct: 135 VEGTFLENCPICEVDSISKRGIDNLIQMI 163 >gi|226290592|gb|EEH46076.1| large-subunit GTPase [Paracoccidioides brasiliensis Pb18] Length = 697 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 14/85 (16%) Query: 13 IFLRGVPEI----GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 +FL P I G K P I G NVGKSS IN L+ K ++ S PG+T+H Sbjct: 338 LFLTAAPNIKPKDGDRGKPKPITIGLVGYPNVGKSSTINALLGAKKVS-VSATPGKTKHF 396 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPG 93 P L D PG Sbjct: 397 QTLYLS---------PNFLLCDCPG 412 >gi|331090851|ref|ZP_08339697.1| GTP-binding protein engA [Lachnospiraceae bacterium 2_1_46FAA] gi|330399710|gb|EGG79372.1| GTP-binding protein engA [Lachnospiraceae bacterium 2_1_46FAA] Length = 442 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 15/147 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA G+ NVGKSS+IN L N S+ G T+ P + N + Sbjct: 178 PRIAIVGKPNVGKSSIINKL-QGDNRVIVSDIAGTTRDA-IDTP-----ITYNGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 231 DTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLIVIDATEGVTEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKY 176 IV+ K D A E +KT Y Sbjct: 289 KGIIIVVNKWD------AIEKHDKTMY 309 >gi|324506259|gb|ADY42677.1| Large subunit GTPase 1 [Ascaris suum] Length = 342 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G NVGKSS IN ++ +K ++ S PG+T+HL + L + P + M Sbjct: 61 VGMVGYPNVGKSSTINRILGKKKVS-VSATPGKTRHLQTLIVDSEVTL-CDCPGLV---M 115 Query: 92 PGYGYARA 99 P + ++R+ Sbjct: 116 PSFAFSRS 123 >gi|312872669|ref|ZP_07732734.1| tRNA modification GTPase TrmE [Lactobacillus iners LEAF 2062A-h1] gi|311091711|gb|EFQ50090.1| tRNA modification GTPase TrmE [Lactobacillus iners LEAF 2062A-h1] Length = 461 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 16/138 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L +++ A +N G T+ +++ +LK L + L+D Sbjct: 228 AIVGRPNVGKSSLLNYL-SKEEKAIVTNIAGTTRD----TLEEYVSLKGIL--LKLIDTA 280 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVS 151 G R V+ G + R + V LLI+ + + DQ + DKK + Sbjct: 281 GI---RQTDDIVEKIG--VERSKRAITESDLVLLLINSSEELTEEDQKLLELTQDKKRI- 334 Query: 152 YQIVLTKIDKLSPTTAQE 169 I+L K D+++ T ++ Sbjct: 335 --IILNKADQVAKITKKD 350 >gi|302308561|ref|NP_985506.2| AFL042Cp [Ashbya gossypii ATCC 10895] gi|299790690|gb|AAS53330.2| AFL042Cp [Ashbya gossypii ATCC 10895] Length = 641 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 10/63 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I G NVGKSS IN LV K ++ S+ PG+T+H F +K + M L D Sbjct: 342 QIGLVGYPNVGKSSTINALVGAKKVS-VSSTPGKTKH--------FQTIKLSDRVM-LCD 391 Query: 91 MPG 93 PG Sbjct: 392 CPG 394 >gi|242003828|ref|XP_002422876.1| mmr1/hsr1 GTP binding protein, putative [Pediculus humanus corporis] gi|212505758|gb|EEB10138.1| mmr1/hsr1 GTP binding protein, putative [Pediculus humanus corporis] Length = 441 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 K G I G+ NVGKSSL+N ++ +K + S PG T+H Sbjct: 207 KGGSLTIGCIGQPNVGKSSLMNAIMGKK-VVSVSRTPGHTKHFQ 249 >gi|196015400|ref|XP_002117557.1| hypothetical protein TRIADDRAFT_61546 [Trichoplax adhaerens] gi|190579879|gb|EDV19967.1| hypothetical protein TRIADDRAFT_61546 [Trichoplax adhaerens] Length = 1207 Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 28/166 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFS 77 P I G + GK+ +++ + R+ + A G TQ + VP K+F+ Sbjct: 610 PVICVLGHVDTGKTKILDKI--RRTHVQDGEAGGITQQIGATKVPVEAIREQTKNIKEFA 667 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVK 135 LP + ++D PG+ + + + ++ L R + C L+ID HG++ Sbjct: 668 TFDLKLPGLLIIDTPGH-ESFSINEQFSTFSNL-----RNRGSSLCDIAILVIDLMHGLE 721 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKL-----SP-TTAQETLEKTK 175 + + L K+ + + L K+D+L +P T+ + L+K K Sbjct: 722 PQTIESINLLKKRKTPFIVALNKVDRLFEWKKAPHTSVADALKKQK 767 >gi|170749854|ref|YP_001756114.1| GTP-binding protein Era [Methylobacterium radiotolerans JCM 2831] gi|170656376|gb|ACB25431.1| GTP-binding protein Era [Methylobacterium radiotolerans JCM 2831] Length = 332 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N LV K S + Q V L + LVD Sbjct: 42 VALIGVPNAGKSTLLNNLVGTK----VSIVSRKVQTTRALV---RGILIEGSAQVVLVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ +D ++ S + V LL+D R GV + V L + Sbjct: 95 PGIF---APKRRLDR--AMVHSAWSGAADADAVCLLVDARKGVDAEVEAVLGRLGEVKRE 149 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L KID L P + L+ L P A E S++ G+ LR+A+ Sbjct: 150 KLLILNKID-LIPR--ERLLDLAAKLNAAAPFA--ETFMISALNGDGVADLRRAL 199 >gi|229542320|ref|ZP_04431380.1| tRNA modification GTPase TrmE [Bacillus coagulans 36D1] gi|229326740|gb|EEN92415.1| tRNA modification GTPase TrmE [Bacillus coagulans 36D1] Length = 461 Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV ++N A ++ PG T+ V +++ N++ +P + L+D Sbjct: 227 AIIGRPNVGKSSLLNSLV-QENKAIVTDIPGTTRD----VIEEYVNVR-GVP-LRLIDTA 279 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R + L+I+ + D+ +F ++ + Sbjct: 280 GI---RETEDIVERIG--VERSRKALKEADLILLVINSSEPLSPEDEALFEAVE--GMDV 332 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L K D Q +E + L + +++ TS V +G+E L AI Sbjct: 333 IVILNKWD----LPHQVEMESVRELAQG-----AKILTTSLVTEEGMEKLEDAI 377 >gi|332262840|ref|XP_003280466.1| PREDICTED: large subunit GTPase 1 homolog [Nomascus leucogenys] Length = 658 Score = 35.4 bits (80), Expect = 5.1, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|333013364|gb|EGK32736.1| selenocysteine-specific translation elongation factor [Shigella flexneri K-227] Length = 614 Score = 35.4 bits (80), Expect = 5.1, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|320534514|ref|ZP_08034972.1| ferrous iron transport protein B [Actinomyces sp. oral taxon 171 str. F0337] gi|320133269|gb|EFW25759.1| ferrous iron transport protein B [Actinomyces sp. oral taxon 171 str. F0337] Length = 709 Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 9/74 (12%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 +G P +A +G N GK+S+ N L A+T N PG T V + K + Sbjct: 38 SGAPRVALAGAPNAGKTSIYNALTGLH--AKTGNYPGVT------VQRSLGTCKVGGKTL 89 Query: 87 ALVDMPGYGYARAP 100 + D+PG Y+ P Sbjct: 90 TIEDLPG-AYSLDP 102 >gi|224475497|ref|YP_002633103.1| tRNA modification GTPase TrmE [Staphylococcus carnosus subsp. carnosus TM300] gi|222420104|emb|CAL26918.1| putative tRNA modification GTPase TrmE [Staphylococcus carnosus subsp. carnosus TM300] Length = 460 Score = 35.4 bits (80), Expect = 5.1, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSS++N L+ + N A + G T+ V +++ N++ +P + LVD G Sbjct: 229 GKPNVGKSSMLNNLI-QDNKAIVTEVAGTTRD----VLEEYVNVR-GVP-LRLVDTAGI- 280 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + R S + +++ G+ + D+ ++ + K I+ Sbjct: 281 --RETEDIVEKIG--VERSRKALSEADLILFVLNYNEGLTEEDRKLYEVI--KNEDAIII 334 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D L++ K ++ + P VI TS +K++GI+ L + I Sbjct: 335 VNKTD----LEQHLDLDEVKAMVGDMP-----VIETSMLKQEGIDQLEEQI 376 >gi|241068611|ref|XP_002408485.1| GTP-binding protein EngA, putative [Ixodes scapularis] gi|215492473|gb|EEC02114.1| GTP-binding protein EngA, putative [Ixodes scapularis] Length = 317 Score = 35.4 bits (80), Expect = 5.1, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 29/189 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I SGR N GKS+ IN L+N + L T G T+ + D+ KNN + L+D Sbjct: 51 QIVVSGRPNAGKSTFINALINDERLL-TGPEAGITRE---SIEIDWQ-YKNN--HIKLID 103 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTL------RCVYLLIDCRHGVKQIDQDVFSF 144 G ++++ LS T+ V L+ID +KQ D ++ S Sbjct: 104 TAGLRKKSTITESLEK--------LSASDTINSIKFANTVILMIDALVPLKQQDLNIASH 155 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPT---SSVKRKGI 199 + + S IV+ K D + + + E+ Y I T P+V +P S++ ++ I Sbjct: 156 VVNEGRSIVIVVNKWDLVKESEKEAFQEEFYYQIN---THLPQVKGVPVLFISAINKQNI 212 Query: 200 EVLRKAILE 208 E + A L+ Sbjct: 213 EQVLDACLK 221 >gi|91217172|ref|ZP_01254134.1| GTP-binding protein EngA [Psychroflexus torquis ATCC 700755] gi|91184772|gb|EAS71153.1| GTP-binding protein EngA [Psychroflexus torquis ATCC 700755] Length = 442 Score = 35.4 bits (80), Expect = 5.1, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 15/131 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N ++ R+ A +A G T+ + + N L+D Sbjct: 13 VAVVGRPNVGKSTLFNRMIKRRE-AIVDSASGVTRD------RHYGKSDWNGREFTLIDT 65 Query: 92 PGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 GY G +K +D L + + ++D G+ +D+DV L K Sbjct: 66 GGYVIGSDDVFEKEIDKQVELAI------DEADVIIFVVDVITGITPMDEDVSKLLRKIN 119 Query: 150 VSYQIVLTKID 160 + + K+D Sbjct: 120 KPVVLCVNKVD 130 >gi|332996186|gb|EGK15813.1| selenocysteine-specific translation elongation factor [Shigella flexneri VA-6] Length = 614 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|323959411|gb|EGB55071.1| selenocysteine-specific translation elongation protein [Escherichia coli H489] Length = 614 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|317968893|ref|ZP_07970283.1| GTP-binding protein Der [Synechococcus sp. CB0205] Length = 454 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + K R +P R + D S + P L Sbjct: 176 PIQMAIVGRPNVGKSSLLNAVCGEK---RAIVSPIRGTTRDTI---DTSIEREGKP-WKL 228 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D G R+ + +G I R ERS + CV L+ID GV + DQ + ++ Sbjct: 229 LDTAGIRRRRSVNYGPEYFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAGRIE 284 Query: 147 KKAVSYQIVLTKIDKLS 163 ++ + +V+ K D + Sbjct: 285 EEGRACVVVVNKWDAIE 301 >gi|307314614|ref|ZP_07594214.1| selenocysteine-specific translation elongation factor [Escherichia coli W] gi|306905827|gb|EFN36351.1| selenocysteine-specific translation elongation factor [Escherichia coli W] gi|315062878|gb|ADT77205.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli W] gi|323376531|gb|ADX48799.1| selenocysteine-specific translation elongation factor [Escherichia coli KO11] Length = 614 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|291284961|ref|YP_003501779.1| Selenocysteine-specific translation elongation factor [Escherichia coli O55:H7 str. CB9615] gi|209754988|gb|ACI75806.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli] gi|209754994|gb|ACI75809.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli] gi|290764834|gb|ADD58795.1| Selenocysteine-specific translation elongation factor [Escherichia coli O55:H7 str. CB9615] gi|320645069|gb|EFX14093.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H- str. 493-89] gi|320650336|gb|EFX18819.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H- str. H 2687] gi|320655910|gb|EFX23833.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661690|gb|EFX29105.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O55:H7 str. USDA 5905] Length = 614 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|255083617|ref|XP_002508383.1| predicted protein [Micromonas sp. RCC299] gi|226523660|gb|ACO69641.1| predicted protein [Micromonas sp. RCC299] Length = 355 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 GLLP+ P A G NVGKS+LIN L N K A ++ PG T+ L + Sbjct: 132 GLLPR--PVRTAVIGYPNVGKSALINRLTNSKTCA-SAPRPGVTRDLRW 177 >gi|213027904|ref|ZP_03342351.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 153 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + Sbjct: 14 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY----------------GRA 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 ++ G + +D + ++E+S L V ++D R G+ D+ + Sbjct: 57 EVEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKH 116 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + +V K D L P A Sbjct: 117 LRSREKPTFLVANKTDGLDPDQA 139 >gi|118790039|ref|XP_317984.3| AGAP004824-PA [Anopheles gambiae str. PEST] gi|116122326|gb|EAA13253.3| AGAP004824-PA [Anopheles gambiae str. PEST] Length = 871 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 27/139 (19%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFSNLKNNL 83 G + GK+ +++ L R+ + A G TQ + VP K F L+ L Sbjct: 289 GHVDTGKTKILDKL--RRTNVQDGEAGGITQQIGATNVPSENIKEQTRFVKGFQELEFKL 346 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + ++D PG+ +S+ L R S L++D HG++ + + Sbjct: 347 PGLLIIDTPGH----------ESFSNLRSRG---SSLCDIAILVVDIMHGLEPQTIESIN 393 Query: 144 FLDKKAVSYQIVLTKIDKL 162 L K + + L KID+L Sbjct: 394 LLKSKRTPFVVALNKIDRL 412 >gi|332997616|gb|EGK17230.1| selenocysteine-specific translation elongation factor [Shigella flexneri K-272] Length = 579 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 45 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 104 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 105 EAKLFITAATEGRGIDALREHLLQ 128 >gi|332997439|gb|EGK17055.1| selenocysteine-specific translation elongation factor [Shigella flexneri K-218] Length = 579 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 45 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 104 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 105 EAKLFITAATEGRGIDALREHLLQ 128 >gi|332085032|gb|EGI90212.1| selenocysteine-specific translation elongation factor [Shigella boydii 5216-82] Length = 614 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|320666714|gb|EFX33697.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 str. LSU-61] Length = 614 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|320174948|gb|EFW50064.1| Selenocysteine-specific translation elongation factor [Shigella dysenteriae CDC 74-1112] Length = 614 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|331649409|ref|ZP_08350495.1| selenocysteine-specific translation elongation factor [Escherichia coli M605] gi|331041907|gb|EGI14051.1| selenocysteine-specific translation elongation factor [Escherichia coli M605] Length = 614 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|251778361|ref|ZP_04821281.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082676|gb|EES48566.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 397 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 PKA I+ G+ N GKSSLIN L N+ L+ S+ PG T Sbjct: 5 PKANRLHISIFGKRNAGKSSLINALTNQP-LSLVSDTPGTT 44 >gi|116071134|ref|ZP_01468403.1| GTP-binding protein EngA [Synechococcus sp. BL107] gi|116066539|gb|EAU72296.1| GTP-binding protein EngA [Synechococcus sp. BL107] Length = 455 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 15/153 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +++ GR NVGKSSL+N + + R +P R + D + ++ N P L Sbjct: 177 PIQMSIIGRPNVGKSSLLNAICGEQ---RAIVSPIRGTTRDTI---DTNIVRENRP-WRL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R+ + +G I R ERS + CV L+ID GV + DQ + ++ Sbjct: 230 VDTAGIRRRRSVNYGPEYFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + + +V+ K D + + T+ T+ +R Sbjct: 286 EDGRACVVVVNKWDAVEKDS--HTMSATEKELR 316 >gi|26250233|ref|NP_756273.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli CFT073] gi|227883758|ref|ZP_04001563.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli 83972] gi|300971515|ref|ZP_07171486.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 45-1] gi|301047053|ref|ZP_07194156.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 185-1] gi|331659904|ref|ZP_08360842.1| selenocysteine-specific translation elongation factor [Escherichia coli TA206] gi|26110662|gb|AAN82847.1|AE016768_265 Selenocysteine-specific elongation factor [Escherichia coli CFT073] gi|227839338|gb|EEJ49804.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli 83972] gi|300301025|gb|EFJ57410.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 185-1] gi|300411227|gb|EFJ94765.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 45-1] gi|307555693|gb|ADN48468.1| selenocysteine-specific elongation factor [Escherichia coli ABU 83972] gi|315294090|gb|EFU53442.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 153-1] gi|315300139|gb|EFU59377.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 16-3] gi|331053119|gb|EGI25152.1| selenocysteine-specific translation elongation factor [Escherichia coli TA206] Length = 614 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|15804131|ref|NP_290170.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 EDL933] gi|15833721|ref|NP_312494.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 str. Sakai] gi|168746866|ref|ZP_02771888.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4113] gi|168753406|ref|ZP_02778413.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4401] gi|168759680|ref|ZP_02784687.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4501] gi|168766002|ref|ZP_02791009.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4486] gi|168772450|ref|ZP_02797457.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4196] gi|168779738|ref|ZP_02804745.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4076] gi|168785460|ref|ZP_02810467.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC869] gi|168797426|ref|ZP_02822433.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC508] gi|195935117|ref|ZP_03080499.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 str. EC4024] gi|208807148|ref|ZP_03249485.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4206] gi|208812226|ref|ZP_03253555.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4045] gi|208818260|ref|ZP_03258580.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4042] gi|209399470|ref|YP_002273070.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4115] gi|217324426|ref|ZP_03440510.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. TW14588] gi|254795544|ref|YP_003080381.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 str. TW14359] gi|261224903|ref|ZP_05939184.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 str. FRIK2000] gi|261254197|ref|ZP_05946730.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 str. FRIK966] gi|12518329|gb|AAG58734.1|AE005585_8 selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 str. EDL933] gi|13363942|dbj|BAB37890.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 str. Sakai] gi|187771494|gb|EDU35338.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4196] gi|188018389|gb|EDU56511.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4113] gi|189002240|gb|EDU71226.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4076] gi|189359119|gb|EDU77538.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4401] gi|189364524|gb|EDU82943.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4486] gi|189369533|gb|EDU87949.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4501] gi|189374456|gb|EDU92872.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC869] gi|189379882|gb|EDU98298.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC508] gi|208726949|gb|EDZ76550.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4206] gi|208733503|gb|EDZ82190.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4045] gi|208738383|gb|EDZ86065.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4042] gi|209160870|gb|ACI38303.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC4115] gi|209754990|gb|ACI75807.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli] gi|209754992|gb|ACI75808.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli] gi|209754996|gb|ACI75810.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli] gi|217320647|gb|EEC29071.1| selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. TW14588] gi|254594944|gb|ACT74305.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 str. TW14359] gi|320191358|gb|EFW66008.1| Selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. EC1212] gi|326337410|gb|EGD61245.1| Selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. 1044] gi|326339935|gb|EGD63742.1| Selenocysteine-specific translation elongation factor [Escherichia coli O157:H7 str. 1125] Length = 614 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|323166934|gb|EFZ52673.1| selenocysteine-specific translation elongation factor [Shigella sonnei 53G] Length = 579 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 45 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 104 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 105 EAKLFITAATEGRGIDALREHLLQ 128 >gi|312873279|ref|ZP_07733334.1| tRNA modification GTPase TrmE [Lactobacillus iners LEAF 2052A-d] gi|311091159|gb|EFQ49548.1| tRNA modification GTPase TrmE [Lactobacillus iners LEAF 2052A-d] Length = 461 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 16/138 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L +++ A +N G T+ +++ +LK L + L+D Sbjct: 228 AIVGRPNVGKSSLLNYL-SKEEKAIVTNIAGTTRD----TLEEYVSLKGIL--LKLIDTA 280 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL-DKKAVS 151 G R V+ G + R + V LLI+ + + DQ + DKK + Sbjct: 281 GI---RQTDDIVEKIG--VERSKRAITESDLVLLLINSSEELTEEDQKLLELTQDKKRI- 334 Query: 152 YQIVLTKIDKLSPTTAQE 169 I+L K D+++ T ++ Sbjct: 335 --IILNKADQVAKITKKD 350 >gi|270004156|gb|EFA00604.1| hypothetical protein TcasGA2_TC003476 [Tribolium castaneum] Length = 584 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 13/72 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G+ NVGKSSLIN ++ +K + S PG T+H F+ P + L D Sbjct: 343 IGCLGQPNVGKSSLINAIMGKK-VVSVSRTPGHTKHFQTIFL----------TPNVRLCD 391 Query: 91 MPGYGY-ARAPK 101 PG + ++ PK Sbjct: 392 CPGLVFPSKTPK 403 >gi|293417033|ref|ZP_06659670.1| selenocysteine-specific translation elongation factor [Escherichia coli B185] gi|222035303|emb|CAP78048.1| Selenocysteine-specific elongation factor [Escherichia coli LF82] gi|291431609|gb|EFF04594.1| selenocysteine-specific translation elongation factor [Escherichia coli B185] gi|312948154|gb|ADR28981.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O83:H1 str. NRG 857C] gi|323174253|gb|EFZ59881.1| selenocysteine-specific translation elongation factor [Escherichia coli LT-68] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|215488873|ref|YP_002331304.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O127:H6 str. E2348/69] gi|312968069|ref|ZP_07782280.1| selenocysteine-specific translation elongation factor [Escherichia coli 2362-75] gi|215266945|emb|CAS11388.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O127:H6 str. E2348/69] gi|312287328|gb|EFR15237.1| selenocysteine-specific translation elongation factor [Escherichia coli 2362-75] gi|323189368|gb|EFZ74650.1| selenocysteine-specific translation elongation factor [Escherichia coli RN587/1] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|188590462|ref|YP_001922641.1| GTP-binding protein [Clostridium botulinum E3 str. Alaska E43] gi|188500743|gb|ACD53879.1| GTP-binding protein [Clostridium botulinum E3 str. Alaska E43] Length = 397 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 PKA I+ G+ N GKSSLIN L N+ L+ S+ PG T Sbjct: 5 PKANRLHISIFGKRNAGKSSLINALTNQP-LSLVSDTPGTT 44 >gi|171780272|ref|ZP_02921176.1| hypothetical protein STRINF_02060 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281620|gb|EDT47055.1| hypothetical protein STRINF_02060 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 437 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 10/137 (7%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + +F++ + Sbjct: 173 PDIIKFSLIGRPNVGKSSLINAILGEERVI-ASPIAGTTRDA---IDTNFTDSEGQ--EY 226 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++I+ G+++ D+ + F Sbjct: 227 TMIDTAGMRKSGKVYENTEKYS--VMRSMRAIDRSDIVLMVINAEEGIREYDKRIAGFAH 284 Query: 147 KKAVSYQIVLTKIDKLS 163 + IV+ K D + Sbjct: 285 EAGKGIIIVVNKWDTIE 301 >gi|117619280|ref|YP_855344.1| GTP-binding protein Era [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560687|gb|ABK37635.1| GTP-binding protein Era [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 299 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 30/180 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N L+ +K ++ TS P T+H L +++ + V Sbjct: 10 VAIVGRPNVGKSTLLNKLLGQK-VSITSKKPQTTRHRILGIDTEENYQTI--------YV 60 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERST-----LRCVYLLIDCRHGVKQIDQDVFSF 144 D PG N R ++ +T + V ++D H K D+ V Sbjct: 61 DTPGLHIEEKRAIN---------RLMNRAATSSLGDVAMVVFMVDGTHWTKD-DEMVLGK 110 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + KID + ++ L ++L + AH ++P S+ K +E +R+ Sbjct: 111 LRHLKCPVVLAVNKIDNVKE--KEDLLPHLEWLGQQMNFAH--ILPISAEKGTNVEKIRE 166 >gi|161881|gb|AAA98602.1| ORF 1 [Theileria parva] Length = 435 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 36/200 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLART------SNAPGRT---QHLNFFVPKDFSNLKNN 82 ++ GRSNVGKS L N ++ + A S PG T + F+ LK N Sbjct: 3 VSLIGRSNVGKSRLFNSILAQAGKASNILKSIVSEKPGTTRDSKQAQFY-------LKGN 55 Query: 83 LPAMALVDMPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLIDCRHGVK 135 + LVD G+ + +K DS I+ ER T + V + ++D GV Sbjct: 56 --KITLVDTGGFEAFLTKTQKREDSTLSKII----ERETHKAVRSSNLIFFVLDGSEGVT 109 Query: 136 QID----QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH-PEVIP 190 +D + + ++LD+ + ++ L I+KL + E E + + T + E + Sbjct: 110 PLDVHLAEKLRNWLDQAHIKPEVKLV-INKLENKGSDEYYEALSDCLSDCHTLYMGEPVF 168 Query: 191 TSSVKRKGIEVLRKAILETI 210 S+ +R GI+ L I+E++ Sbjct: 169 VSAQERSGIDKL-TGIMESM 187 >gi|332764213|gb|EGJ94450.1| selenocysteine-specific translation elongation factor [Shigella flexneri 2930-71] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|325687138|gb|EGD29161.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK72] Length = 436 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLS 163 + IV+ K D L Sbjct: 284 EAGKGIVIVVNKWDTLD 300 >gi|323974993|gb|EGB70102.1| selenocysteine-specific translation elongation protein [Escherichia coli TW10509] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|306816058|ref|ZP_07450196.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli NC101] gi|305850454|gb|EFM50911.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli NC101] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|317056494|ref|YP_004104961.1| GTP-binding protein Era [Ruminococcus albus 7] gi|315448763|gb|ADU22327.1| GTP-binding protein Era [Ruminococcus albus 7] Length = 298 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 18/172 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + +GR+N GKSSL+N LV K +A S+ P T+ K L +D Sbjct: 7 VTIAGRANAGKSSLLNALVGEK-IAAVSDKPQTTR------TKITGVLTKGETQFVFMDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG A+ + +V ++E T + + + DC + ++ + Sbjct: 60 PGMHKAK------NKLSEHMVNTVNETITGVDMIIFMCDCTKKISDNEKSLIESFKGGKS 113 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + L KID L ++ + K Y A EV+P S V G++++ Sbjct: 114 KVILALNKIDLLD--NKEDVIVKLSEYSALYDFA--EVVPISVVGNDGLDII 161 >gi|296113913|ref|YP_003627851.1| GTP-binding protein Era [Moraxella catarrhalis RH4] gi|295921607|gb|ADG61958.1| GTP-binding protein Era [Moraxella catarrhalis RH4] gi|326561463|gb|EGE11813.1| GTP-binding protein Era [Moraxella catarrhalis 46P47B1] gi|326568471|gb|EGE18551.1| GTP-binding protein Era [Moraxella catarrhalis BC7] Length = 331 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 36/187 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K L+ TS P T+H + L + + VD Sbjct: 34 VAIVGRPNVGKSTLMNHMLGQK-LSITSRKPQTTRHRIHGI------LTDEDRQIVFVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER------STLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG VR ++ER S L V +++ G++ + D+ + Sbjct: 87 PGIHSKE-------------VRVINERMNKAAISALADVDVVLFVVDGIQWREDDLLTLE 133 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL--IRNYPTA--HPEVIPTSSVKRKGIEV 201 A + ++L I+K A +K+K L I ++ + ++IP S+++R ++ Sbjct: 134 KLSATNLPVILV-INK-----ADTVKDKSKLLPVIESFSESFDFADIIPVSALRRHNLDR 187 Query: 202 LRKAILE 208 L+ I E Sbjct: 188 LQSVIGE 194 >gi|281180636|dbj|BAI56966.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli SE15] gi|330909655|gb|EGH38169.1| selenocysteine-specific translation elongation factor [Escherichia coli AA86] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|259503207|ref|ZP_05746109.1| ribosome-associated GTPase EngA [Lactobacillus antri DSM 16041] gi|259168864|gb|EEW53359.1| ribosome-associated GTPase EngA [Lactobacillus antri DSM 16041] Length = 437 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 18/173 (10%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMA 87 I FS GR NVGKSSL+N ++ +N SN G T+ FV D Sbjct: 175 IRFSLIGRPNVGKSSLVNGILG-ENRVIVSNMAGTTRDAINTRFVAPDGQEF-------T 226 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G +N + + ++R + V ++++ G+++ID+ + + + Sbjct: 227 MIDTAGIRKQGKIYENTERYA--LMRAMRAIDDSDVVLVVLNAEEGIREIDKHIAGYAHE 284 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN---YPTAHPEVIPTSSVKRK 197 I + K D + Q T+ LIR+ Y + P + ++ K++ Sbjct: 285 AGCGVIIAVNKWDTIEGRD-QRTMTDFTNLIRHEFQYLSYAPIIFVSAKTKQR 336 >gi|194041035|ref|XP_001928271.1| PREDICTED: large subunit GTPase 1 homolog [Sus scrofa] Length = 652 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 377 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 426 Query: 86 MALVDMPG 93 + L D PG Sbjct: 427 LCLCDCPG 434 >gi|91213105|ref|YP_543091.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli UTI89] gi|117625870|ref|YP_859193.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli APEC O1] gi|218560665|ref|YP_002393578.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli S88] gi|237703360|ref|ZP_04533841.1| selenocysteinyl-tRNA-specific translation factor [Escherichia sp. 3_2_53FAA] gi|91074679|gb|ABE09560.1| selenocysteine-specific elongation factor [Escherichia coli UTI89] gi|115514994|gb|ABJ03069.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli APEC O1] gi|218367434|emb|CAR05216.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli S88] gi|226902624|gb|EEH88883.1| selenocysteinyl-tRNA-specific translation factor [Escherichia sp. 3_2_53FAA] gi|294491242|gb|ADE89998.1| selenocysteine-specific translation elongation factor [Escherichia coli IHE3034] gi|307628669|gb|ADN72973.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli UM146] gi|315285348|gb|EFU44793.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 110-3] gi|323949832|gb|EGB45716.1| selenocysteine-specific translation elongation protein [Escherichia coli H252] gi|323954867|gb|EGB50647.1| selenocysteine-specific translation elongation protein [Escherichia coli H263] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|323182752|gb|EFZ68154.1| selenocysteine-specific translation elongation factor [Escherichia coli 1357] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVNEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|322509029|gb|ADX04483.1| era [Acinetobacter baumannii 1656-2] Length = 340 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + + A+ VD Sbjct: 40 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGI-----DSCEKMQAV-YVDT 92 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVFSFLDKK 148 PG KK V + ++ R + S LR V L +ID + Q D V L Sbjct: 93 PGMH-----KKEVRAINKMMNR--AAHSALRDVNLVLFVIDAQKWT-QNDDLVLEKLKNA 144 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K D L + + + N+ E++P S+++ +E L + I + Sbjct: 145 DMPVILVINKADTFGDKREILPLIQERAKLMNF----AEIVPVSALRGANLEHLSETIEK 200 Query: 209 TINY 212 + Y Sbjct: 201 YLPY 204 >gi|320639905|gb|EFX09499.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O157:H7 str. G5101] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|209921058|ref|YP_002295142.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli SE11] gi|209914317|dbj|BAG79391.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli SE11] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVNEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|47154997|emb|CAE85196.1| YeeP protein [Escherichia coli] Length = 353 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 28/195 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G+S GKSSL N L + + S+ T+ + F L + M + Sbjct: 100 PVIGIMGKSGAGKSSLCNALF-QGEVTPVSDVHAGTREVRRF------RLSGHGHNMVIT 152 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF-SFLDKK 148 D+PG G +R ++ L L E L V LI +D+ + L + Sbjct: 153 DLPGVGESRDRDAEYEA---LYRDILPE---LDLVLWLIKADDRALSVDEYFWRHILHRG 206 Query: 149 AVSYQIVLTKIDKL-------------SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 V+T+ DK SP AQ EKT+ + R + HP V+ S+ Sbjct: 207 HQQVLFVVTQADKTEPCHEWDVAGIQPSPAQAQNIREKTEAVFRLFRPVHP-VVAVSART 265 Query: 196 RKGIEVLRKAILETI 210 ++ L A++ + Sbjct: 266 GWELDTLVSALMTAL 280 >gi|82545952|ref|YP_409899.1| selenocysteinyl-tRNA-specific translation factor [Shigella boydii Sb227] gi|81247363|gb|ABB68071.1| selenocysteinyl-tRNA-specific translation factor [Shigella boydii Sb227] gi|320187740|gb|EFW62415.1| Selenocysteine-specific translation elongation factor [Shigella flexneri CDC 796-83] gi|332089520|gb|EGI94624.1| selenocysteine-specific translation elongation factor [Shigella boydii 3594-74] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|74314176|ref|YP_312595.1| selenocysteinyl-tRNA-specific translation factor [Shigella sonnei Ss046] gi|73857653|gb|AAZ90360.1| selenocysteinyl-tRNA-specific translation factor [Shigella sonnei Ss046] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|27380171|ref|NP_771700.1| GTP-binding protein Era [Bradyrhizobium japonicum USDA 110] gi|30178619|sp|O69162|ERA_BRAJA RecName: Full=GTPase Era gi|27353325|dbj|BAC50325.1| GTP-binding protein Era [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 31/186 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + + V ++NN + LVD Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIV------IENN-AQIILVDT 70 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG +PK+ +D +W G + + L CV L+D + G ID++ + L Sbjct: 71 PGI---FSPKRRLDRAMVSTAWSG------AHDADLVCV--LLDAKTG---IDEEAEAIL 116 Query: 146 DKKA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 K A V++ +L I+K+ ++ L + P A +I +++ G++ LR Sbjct: 117 AKAASVNHDKILV-INKVDLVQREKLLALAQAANERMPFAKTFMI--AAISGDGVDDLRS 173 Query: 205 AILETI 210 + E + Sbjct: 174 TLAEMV 179 >gi|194431331|ref|ZP_03063624.1| selenocysteine-specific translation elongation factor [Shigella dysenteriae 1012] gi|218556152|ref|YP_002389065.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli IAI1] gi|194420786|gb|EDX36862.1| selenocysteine-specific translation elongation factor [Shigella dysenteriae 1012] gi|218362920|emb|CAR00555.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli IAI1] gi|323944511|gb|EGB40582.1| selenocysteine-specific translation elongation protein [Escherichia coli H120] gi|332084534|gb|EGI89729.1| selenocysteine-specific translation elongation factor [Shigella dysenteriae 155-74] Length = 614 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|66799649|ref|XP_628750.1| unclassified GTPase [Dictyostelium discoideum AX4] gi|60462090|gb|EAL60337.1| unclassified GTPase [Dictyostelium discoideum AX4] Length = 674 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + +G NVGKSS IN+L K +A + PG+T+++ + D + L+D Sbjct: 333 VGLAGYPNVGKSSTINVLYGEKKVA-VAATPGKTKYVQTIILDD---------EIVLLDC 382 Query: 92 PG 93 PG Sbjct: 383 PG 384 >gi|326664222|ref|XP_001923573.3| PREDICTED: eukaryotic translation initiation factor 5B [Danio rerio] Length = 1229 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 27/152 (17%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-------- 73 +L K P + G + GK+ +++ L R + A G TQ + VP Sbjct: 634 ILDKLRAPVVCVLGHVDTGKTKILDKL--RHTHVQDGEAGGITQQIGATNVPLDTIVEQT 691 Query: 74 ---KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 K+F +P M ++D PG+ +S+ L R S L++D Sbjct: 692 KMVKNFDRDNVKIPGMLIIDTPGH----------ESFSNLRNRG---SSLCDIAILVVDI 738 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 HG++ + + L +K + + L KID+L Sbjct: 739 MHGLEPQTLESINLLKEKKCPFIVALNKIDRL 770 >gi|331665217|ref|ZP_08366118.1| selenocysteine-specific translation elongation factor [Escherichia coli TA143] gi|331057727|gb|EGI29713.1| selenocysteine-specific translation elongation factor [Escherichia coli TA143] Length = 614 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|331655221|ref|ZP_08356220.1| selenocysteine-specific translation elongation factor [Escherichia coli M718] gi|331047236|gb|EGI19314.1| selenocysteine-specific translation elongation factor [Escherichia coli M718] Length = 614 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|227903851|ref|ZP_04021656.1| GTP-binding protein EngA [Lactobacillus acidophilus ATCC 4796] gi|227868738|gb|EEJ76159.1| GTP-binding protein EngA [Lactobacillus acidophilus ATCC 4796] Length = 435 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 13/142 (9%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I+FS GR NVGKSSL+N L+ + +N G T+ P +K + A + Sbjct: 175 ISFSMIGRPNVGKSSLVNKLLGEDRVI-VANEEGTTRDA-VDTPFTKDGIKFKVVDTAGI 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G Y + K +V +R +S V L++D G+++ D+ V + + Sbjct: 233 RRRGKVYEKTEKYSV-------LRAMSAIERSDVVLLVLDASTGIREQDKHVAGYAHEAG 285 Query: 150 VSYQIVLTKID--KLSPTTAQE 169 IV+ K D + + T+A+E Sbjct: 286 RGIIIVVNKWDLPEKNSTSAKE 307 Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A G+ NVGKS+L N ++N++ LA + PG T+ N+ Sbjct: 4 PVVAIVGQPNVGKSTLFNRIINQR-LAIVEDKPGVTRDRNY 43 >gi|218702360|ref|YP_002409989.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli IAI39] gi|218372346|emb|CAR20216.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli IAI39] Length = 614 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|170681383|ref|YP_001745883.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli SMS-3-5] gi|170519101|gb|ACB17279.1| selenocysteine-specific translation elongation factor [Escherichia coli SMS-3-5] Length = 614 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|157142011|ref|XP_001647782.1| septin [Aedes aegypti] gi|108868188|gb|EAT32450.1| septin [Aedes aegypti] Length = 358 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 32/184 (17%) Query: 32 IAFSGRSNVGKSSLIN--ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP-AMAL 88 + G S +GKS+LIN L + S RT+ K + + + + Sbjct: 36 LMVCGESGLGKSTLINSLFLTDLYQNRTVSQVEERTEKTTKIDKKTLDIEEKGVKLRLTI 95 Query: 89 VDMPGYGYARAPKKNVDSW------------------GGLIVRYLSERSTLRCVYLLIDC 130 VD PG+G + + DSW GL R + + +Y + Sbjct: 96 VDTPGFGDSINCE---DSWRVCTQYIDEQFRQYFTDESGLNRRNIQDNRVHCLLYFVPPW 152 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ-------ETLEKTKYLIRNYPT 183 HG++Q+D D+ + KK V+ IV+ K D L+ T Q E +E I +P Sbjct: 153 GHGLRQMDIDLMRRMHKK-VNIVIVIGKADTLTTTEVQRLKTRVLEDIESNGLQIYQFPE 211 Query: 184 AHPE 187 + Sbjct: 212 CDSD 215 >gi|115525027|ref|YP_781938.1| GTP-binding protein Era [Rhodopseudomonas palustris BisA53] gi|115518974|gb|ABJ06958.1| GTP-binding protein Era [Rhodopseudomonas palustris BisA53] Length = 313 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 29/181 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + S T+ L + D N + LVD Sbjct: 23 VALIGAPNVGKSTLVNALVGSK-VTIVSRKVQTTRALIRGIVID------NKAQIILVDT 75 Query: 92 PGYGYARAPKKNVD------SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG PK+ +D +W G + + L CV L+D R G ID++ + L Sbjct: 76 PGIFM---PKRRLDRAMVNTAWSG------AHDADLVCV--LLDARAG---IDEEADALL 121 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K A + I+K+ + ++ L+ + N E S++ G+ LR A Sbjct: 122 EKVAKVGHPKILVINKVDIVSKEKLLKLAQDA--NARLTFDETFMVSALSGDGVADLRHA 179 Query: 206 I 206 + Sbjct: 180 L 180 >gi|150391794|ref|YP_001321843.1| small GTP-binding protein [Alkaliphilus metalliredigens QYMF] gi|149951656|gb|ABR50184.1| small GTP-binding protein [Alkaliphilus metalliredigens QYMF] Length = 399 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 35/190 (18%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR NVGKSSLIN L + +++A S G T + K L + Sbjct: 5 PRGNRLHIAIFGRRNVGKSSLINALTD-QDIAVVSQVAGTTTDPVY---KSMEILP--IG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV------YLLIDCRHGVKQID 138 + L+D PG +D G ++ L T + + ++ D G+ + + Sbjct: 59 PVLLIDTPG----------IDDEG--MIGELRIEKTKKVLGKTDLALIVTDAEIGIGEYE 106 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + + K + IV KID + T+YL P ++ TS+ G Sbjct: 107 EGLIDTIRSKEIPIIIVYNKIDLFHASKDI----STEYL--TIP-----IVSTSAKANSG 155 Query: 199 IEVLRKAILE 208 IE L++ I++ Sbjct: 156 IEALKQRIIK 165 >gi|331081965|ref|ZP_08331093.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA] gi|330405560|gb|EGG85090.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA] Length = 441 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 13/136 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MA 87 P+IA G+ NVGKSSLIN ++ + SN G T +D + K Sbjct: 178 PKIAVVGKPNVGKSSLINKILGEDRVI-VSNIAGTT--------RDAIDTKVTYQGKEYT 228 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G K+ ++ + I+R ++ V ++ID GV + D + Sbjct: 229 FIDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVVMMIDATEGVTEQDAKIAGIAHD 286 Query: 148 KAVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 287 RGKGVVIAVNKWDAIE 302 >gi|324007377|gb|EGB76596.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 57-2] Length = 614 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|320193901|gb|EFW68534.1| Selenocysteine-specific translation elongation factor [Escherichia coli WV_060327] Length = 614 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|307207443|gb|EFN85158.1| Eukaryotic translation initiation factor 5B [Harpegnathos saltator] Length = 745 Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 60/218 (27%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFSNLKNNL 83 G + GK+ +++ L R+ + A G TQ + VP K F++ K + Sbjct: 376 GHVDTGKTKILDKL--RRTNVQDGEAGGITQQIGATNVPIEAIQESTKHVKGFADKKFKI 433 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P + ++D PG+ +S+ L R S L++D HG++ + + Sbjct: 434 PGLLIIDTPGH----------ESFSNLRSR---GSSLCDIAILVVDIMHGLEPQTLESIN 480 Query: 144 FLDKKAVSYQIVLTKIDKL------------------SPTTAQETLEKTKYLIRNY---- 181 L K + + L KID+L +P T +E ++K +I + Sbjct: 481 LLKAKKCPFVVALNKIDRLYDWQTMNRKDVQDIVKNQAPNTQREFENRSKDIIVQFAEQS 540 Query: 182 -----------PTAHPEVIPTSSVKRKGIEVLRKAILE 208 P ++ ++PTS++ +G+ L I++ Sbjct: 541 LNAALFYENPDPRSYVSLVPTSAITGEGMGNLLALIVD 578 >gi|300815175|ref|ZP_07095400.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 107-1] gi|300532067|gb|EFK53129.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 107-1] gi|324017889|gb|EGB87108.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 117-3] Length = 614 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVNEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|269103271|ref|ZP_06155968.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae CIP 102761] gi|268163169|gb|EEZ41665.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae CIP 102761] Length = 499 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 22/143 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + N ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTR------DRKYGRAEINEHEFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G +D + ++E+S + V L+D R G+ D+ + Sbjct: 56 DTGG----------IDGTEEGVETKMAEQSLMAIEEADVVLFLVDGRAGLTAADEAIAKH 105 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA 167 L + +V+ KID + +A Sbjct: 106 LRSRNKPTFLVVNKIDGIDADSA 128 >gi|195978761|ref|YP_002124005.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975466|gb|ACG62992.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 446 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 10/134 (7%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + + S G T+ D S + A ++ Sbjct: 185 IRFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRD-----AIDTSFTDESGQAYTMI 238 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +N + + + +RS + V ++I+ G++ D+ + F + Sbjct: 239 DTAGMRKSGKVYENTEKYSVMRAMRAIDRSDI--VLMVINAEEGIRDYDKRIAGFAHEAG 296 Query: 150 VSYQIVLTKIDKLS 163 IV+ K D + Sbjct: 297 KGMIIVVNKWDTIE 310 >gi|114591188|ref|XP_516958.2| PREDICTED: large subunit GTPase 1 homolog [Pan troglodytes] Length = 658 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|24114858|ref|NP_709368.1| selenocysteinyl-tRNA-specific translation factor [Shigella flexneri 2a str. 301] gi|24054094|gb|AAN45075.1| selenocysteinyl-tRNA-specific translation factor [Shigella flexneri 2a str. 301] Length = 614 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|30065132|ref|NP_839303.1| selenocysteinyl-tRNA-specific translation factor [Shigella flexneri 2a str. 2457T] gi|110807736|ref|YP_691256.1| selenocysteinyl-tRNA-specific translation factor [Shigella flexneri 5 str. 8401] gi|30043393|gb|AAP19114.1| selenocysteinyl-tRNA-specific translation factor [Shigella flexneri 2a str. 2457T] gi|110617284|gb|ABF05951.1| selenocysteinyl-tRNA-specific translation factor [Shigella flexneri 5 str. 8401] gi|281602951|gb|ADA75935.1| Selenocysteinyl-tRNA-specific translation factor [Shigella flexneri 2002017] gi|313647542|gb|EFS11992.1| selenocysteine-specific translation elongation factor [Shigella flexneri 2a str. 2457T] gi|332749963|gb|EGJ80375.1| selenocysteine-specific translation elongation factor [Shigella flexneri K-671] gi|332750118|gb|EGJ80529.1| selenocysteine-specific translation elongation factor [Shigella flexneri 4343-70] gi|332751152|gb|EGJ81555.1| selenocysteine-specific translation elongation factor [Shigella flexneri 2747-71] gi|333012863|gb|EGK32240.1| selenocysteine-specific translation elongation factor [Shigella flexneri K-304] Length = 614 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|70726437|ref|YP_253351.1| GTP-binding protein EngA [Staphylococcus haemolyticus JCSC1435] gi|123660249|sp|Q4L6I0|DER_STAHJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|68447161|dbj|BAE04745.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 436 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 11/145 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + SN G T+ V ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEDRVI-VSNVAGTTRDA---VDTEYSYDGQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS + V ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERSNV--VLIVIDAEEGIIEQDKRVAGYAHEEGKAVVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRN 180 + K D + + T++K +RN Sbjct: 293 VNKWDTVDKDS--NTMKKFADDVRN 315 >gi|109899453|ref|YP_662708.1| GTP-binding protein Era [Pseudoalteromonas atlantica T6c] gi|109701734|gb|ABG41654.1| GTP-binding protein Era [Pseudoalteromonas atlantica T6c] Length = 300 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 24/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ +K ++ TS P T+H + + N A+ VD Sbjct: 10 IAIVGRPNVGKSTLLNALLGQK-VSITSRKPQTTRHRIMGI-----DTHENRQAI-YVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVK--QIDQDVFSFLDK 147 PG N R+++ S++ V L++ G K + DQ V + + + Sbjct: 63 PGLHIEEKRAIN---------RFMNRAASSSISDVGLVLFVVEGTKWNEDDQMVLTKIMQ 113 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V +++ K D + + L K+L + A +++P S+ K + LR + Sbjct: 114 SNVPCWLIVNKSDNVKD--KEILLPHLKWLGEQH--AFDKIMPISARNGKNVNELRDMVN 169 Query: 208 ETI 210 ET+ Sbjct: 170 ETL 172 >gi|300937207|ref|ZP_07152057.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 21-1] gi|300457719|gb|EFK21212.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 21-1] Length = 614 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|301022829|ref|ZP_07186668.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 69-1] gi|300397350|gb|EFJ80888.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 69-1] Length = 614 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|299067341|emb|CBJ38538.1| Translation initiation factor IF-2 [Ralstonia solanacearum CMR15] Length = 964 Score = 35.4 bits (80), Expect = 5.5, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 24/184 (13%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A PP + G + GK+SL++ + R+ A G TQH+ + +++ Sbjct: 463 EARPPVVTVMGHVDHGKTSLLDYI--RRAKVAAGEAGGITQHIGAY------HVETQRGV 514 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + +D PG+ A +R ++T V L++ GV ++ + Sbjct: 515 ITFLDTPGHEAFTA------------MRARGAKAT-DIVILVVAADDGVMPQTKEAIAHA 561 Query: 146 DKKAVSYQIVLTKIDK--LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 V + + KIDK +P ++ L + Y P +P S+ +GIE L Sbjct: 562 KAAGVPIVVAINKIDKPDANPDRVKQELVSESVIPEEYGGDSP-FVPVSAKTGEGIETLL 620 Query: 204 KAIL 207 + +L Sbjct: 621 ENVL 624 >gi|269102541|ref|ZP_06155238.1| hypothetical protein VDA_001967 [Photobacterium damselae subsp. damselae CIP 102761] gi|268162439|gb|EEZ40935.1| hypothetical protein VDA_001967 [Photobacterium damselae subsp. damselae CIP 102761] Length = 514 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 13/142 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K P +A G+ + GKSSL+N L+ A S P Q D +L Sbjct: 279 KVSPLRVAVVGQVSAGKSSLVNALIGEMA-AEVSALPSTDQATVHQCTVDGIDL------ 331 Query: 86 MALVDMPGYGYARAPKKNVDSW---GGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + L+D+PG +A +K + S L++ L + R L ++ R V + Q + Sbjct: 332 VHLIDLPGLDGDKATQKKIVSQITNSDLVLWVLKANQSAR--KLDVELRQAVDEFYQ-LA 388 Query: 143 SFLDKKAVSYQIVLTKIDKLSP 164 + ++KA +++ ++D+L P Sbjct: 389 ANQNRKAPKILVLVNQVDRLPP 410 >gi|260881589|ref|ZP_05404771.2| GTP-binding protein Era [Mitsuokella multacida DSM 20544] gi|260848446|gb|EEX68453.1| GTP-binding protein Era [Mitsuokella multacida DSM 20544] Length = 323 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 IA GR NVGKS+LIN L+ +K +A S+ P TQ+ Sbjct: 34 IAVIGRPNVGKSTLINTLIGQK-IAIMSDKPQTTQN 68 >gi|218707227|ref|YP_002414746.1| selenocysteinyl-tRNA -specific translation factor [Escherichia coli UMN026] gi|293407215|ref|ZP_06651139.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli FVEC1412] gi|298382963|ref|ZP_06992558.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli FVEC1302] gi|300898693|ref|ZP_07117006.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 198-1] gi|218434324|emb|CAR15246.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli UMN026] gi|291426026|gb|EFE99060.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli FVEC1412] gi|298276799|gb|EFI18317.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli FVEC1302] gi|300357656|gb|EFJ73526.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 198-1] Length = 614 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|209878374|ref|XP_002140628.1| eukaryotic translation initiation factor 5B [Cryptosporidium muris RN66] gi|209556234|gb|EEA06279.1| eukaryotic translation initiation factor 5B, putative [Cryptosporidium muris RN66] Length = 904 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 31/167 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSN--------L 79 P G + GK+ +++ + RK + + A G TQ + FF P+ S Sbjct: 312 PICCILGHVDTGKTKILDKM--RKTNIQDNEAGGITQQIGATFFPPEMLSEQIKRVDREF 369 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + +P + +D PG+ +S+ L R S L++D HG++ + Sbjct: 370 ELQIPGLLFIDTPGH----------ESFNNLRSRG---SSLCDIAVLVVDIMHGLEPQTK 416 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTA------QETLEKTKYLIRN 180 + L + + I L KID+L T ++TL+K K + + Sbjct: 417 ESIGLLRNRKCPFIIALNKIDRLYGWTGCSWLPIRDTLDKQKSYVND 463 >gi|50310721|ref|XP_455382.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644518|emb|CAG98090.1| KLLA0F06666p [Kluyveromyces lactis] Length = 648 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 10/63 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I G NVGKSS IN LV K ++ S+ PG+T+H D + L D Sbjct: 347 QIGLVGYPNVGKSSTINALVGAKKVS-VSSTPGKTKHFQTIKLSD---------KVTLCD 396 Query: 91 MPG 93 PG Sbjct: 397 CPG 399 >gi|78184221|ref|YP_376656.1| GTP-binding protein EngA [Synechococcus sp. CC9902] gi|123581907|sp|Q3AZ65|DER_SYNS9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78168515|gb|ABB25612.1| Small GTP-binding protein domain [Synechococcus sp. CC9902] Length = 455 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 15/153 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +++ GR NVGKSSL+N + + R +P R + D + ++ N P L Sbjct: 177 PIQMSIIGRPNVGKSSLLNAICGEQ---RAIVSPIRGTTRDTI---DTNIVRENRP-WRL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R+ + +G I R ERS + CV L+ID GV + DQ + ++ Sbjct: 230 VDTAGIRRRRSVNYGPEYFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + + +V+ K D + + T+ T+ +R Sbjct: 286 EDGRACVVVVNKWDAVEKDS--HTMSATEKELR 316 >gi|58337266|ref|YP_193851.1| GTP-binding protein EngA [Lactobacillus acidophilus NCFM] gi|81311473|sp|Q5FKF4|DER_LACAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|58254583|gb|AAV42820.1| phosphoglycerate dehydrogenase [Lactobacillus acidophilus NCFM] Length = 435 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 13/142 (9%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I+FS GR NVGKSSL+N L+ + +N G T+ P +K + A + Sbjct: 175 ISFSMIGRPNVGKSSLVNKLLGEDRVI-VANEEGTTRDA-VDTPFTKDGIKFKVVDTAGI 232 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G Y + K +V +R +S V L++D G+++ D+ V + + Sbjct: 233 RRRGKVYEKTEKYSV-------LRAMSAIERSDVVLLVLDASTGIREQDKHVAGYAHEAG 285 Query: 150 VSYQIVLTKID--KLSPTTAQE 169 IV+ K D + + T+A+E Sbjct: 286 RGIIIVVNKWDLPEKNSTSAKE 307 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A G+ NVGKS+L N ++N++ LA + PG T+ N+ Sbjct: 4 PVVAIVGQPNVGKSTLFNRIINQR-LAIVEDKPGVTRDRNY 43 >gi|194435596|ref|ZP_03067699.1| selenocysteine-specific translation elongation factor [Escherichia coli 101-1] gi|253771571|ref|YP_003034402.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254163517|ref|YP_003046625.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli B str. REL606] gi|297518749|ref|ZP_06937135.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli OP50] gi|300928791|ref|ZP_07144302.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 187-1] gi|194425139|gb|EDX41123.1| selenocysteine-specific translation elongation factor [Escherichia coli 101-1] gi|242379111|emb|CAQ33913.1| selenocysteyl-tRNA-specific translation elongation factor, subunit of SelB-L-selenocysteinyl-tRNA[sec] [Escherichia coli BL21(DE3)] gi|253322615|gb|ACT27217.1| selenocysteine-specific translation elongation factor [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975418|gb|ACT41089.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli B str. REL606] gi|253979574|gb|ACT45244.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli BL21(DE3)] gi|300463216|gb|EFK26709.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 187-1] Length = 614 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|325978979|ref|YP_004288695.1| GTP-binding protein EngA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178907|emb|CBZ48951.1| GTP-binding protein EngA [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 436 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 10/137 (7%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + +F++ + Sbjct: 172 PDIIKFSLIGRPNVGKSSLINAILGEERVI-ASPIAGTTRDA---IDTNFTDSEGQ--EY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++I+ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRSMRAIDRSDIVLMVINAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLS 163 + IV+ K D + Sbjct: 284 EAGKGIIIVVNKWDTIE 300 >gi|296273309|ref|YP_003655940.1| ribosome-associated GTPase EngA [Arcobacter nitrofigilis DSM 7299] gi|296097483|gb|ADG93433.1| ribosome-associated GTPase EngA [Arcobacter nitrofigilis DSM 7299] Length = 480 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 29/185 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKN-----LARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 +A GR NVGKSS++N L+ ++ +A T+ P V + F N+ Sbjct: 217 VAIIGRVNVGKSSILNALIGQERSVVSPIAGTTIDP---------VDESFEYKDKNI--- 264 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R + ++ + + + + E++ L V L D + +D+ + +D Sbjct: 265 TFVDTAGL-RRRGSIEGIEKFALMRTKEMLEKANLALVVL--DASSELVDLDEKIAGLVD 321 Query: 147 KKAVSYQIVLTKIDKLSPT--TAQETLE-KTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + IVL K D+ T QET+ K K+L + +I S+ + I+ L+ Sbjct: 322 EYGLGTIIVLNKWDENMDTFQKIQETIRSKFKFLY------YAPIIAVSAKTGRSIDKLK 375 Query: 204 KAILE 208 ++E Sbjct: 376 DKLIE 380 >gi|293453902|ref|ZP_06664321.1| selenocysteine-specific translation elongation factor [Escherichia coli B088] gi|291322028|gb|EFE61459.1| selenocysteine-specific translation elongation factor [Escherichia coli B088] Length = 614 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVNEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|284923627|emb|CBG36724.1| selenocysteine-specific elongation factor [Escherichia coli 042] Length = 614 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|61740615|ref|NP_001013439.1| large subunit GTPase 1 homolog [Rattus norvegicus] gi|81882520|sp|Q5BJT6|LSG1_RAT RecName: Full=Large subunit GTPase 1 homolog gi|60688331|gb|AAH91338.1| Large subunit GTPase 1 homolog (S. cerevisiae) [Rattus norvegicus] Length = 655 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 380 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 429 Query: 86 MALVDMPG 93 + L D PG Sbjct: 430 LCLCDCPG 437 >gi|42527683|ref|NP_972781.1| tRNA modification GTPase TrmE [Treponema denticola ATCC 35405] gi|81831356|sp|Q73KN7|MNME_TREDE RecName: Full=tRNA modification GTPase mnmE gi|41818511|gb|AAS12700.1| tRNA modification GTPase TrmE [Treponema denticola ATCC 35405] Length = 472 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 30/180 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-----LNFFVPKDFSNLKNNLPAM 86 + +G++N GKSSL N L+ +++ A S+ G T+ LNF N +P + Sbjct: 228 VVLAGKTNAGKSSLFNALL-KEDRAIVSDIHGTTRDWLEASLNF----------NGIP-V 275 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH--GVKQIDQDVFSF 144 +L D G Y + ++++ G + R L + L D + +++D F Sbjct: 276 SLYDTAGIRYTQ---DSIEAIG--VERSLEMSRNADLILYLCDPKDILSAGSLNKDDSEF 330 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + V+TK D L E+ EK K +++ A P +I SS GI+ L + Sbjct: 331 IKNAKAPVITVITKEDLLDT----ESKEKIKEILKAEKIAEPIII--SSKASNGIKALSE 384 >gi|306832031|ref|ZP_07465186.1| ribosome-associated GTPase EngA [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425957|gb|EFM29074.1| ribosome-associated GTPase EngA [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 436 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 10/137 (7%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + +F++ + Sbjct: 172 PDIIKFSLIGRPNVGKSSLINAILGEERVI-ASPIAGTTRDA---IDTNFTDSEGQ--EY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++I+ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRSMRAIDRSDIVLMVINAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLS 163 + IV+ K D + Sbjct: 284 EAGKGIIIVVNKWDTIE 300 >gi|300871622|ref|YP_003786495.1| GTP-binding protein [Brachyspira pilosicoli 95/1000] gi|300689323|gb|ADK31994.1| GTP-binding protein [Brachyspira pilosicoli 95/1000] Length = 404 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + IA GR NVGKSS+IN + N+ ++A S+ G T P + N + Sbjct: 17 PNSNRTHIAIFGRRNVGKSSIINAIANQ-DVAIVSDTAGTTTD-----PVKKAIEINKIG 70 Query: 85 AMALVDMPGY 94 A +VD G+ Sbjct: 71 ACTIVDTAGF 80 >gi|294669201|ref|ZP_06734281.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308833|gb|EFE50076.1| ribosome biogenesis GTP-binding protein YlqF [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 310 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ-HLNFFVPKDF 76 P + G NVGKS+LIN ++ +K+ A+T N PG T+ F+ DF Sbjct: 114 PLRVMICGIPNVGKSTLINGMLGKKS-AKTGNEPGITKAEQRLFLADDF 161 >gi|288906012|ref|YP_003431234.1| GTP-binding protein [Streptococcus gallolyticus UCN34] gi|288732738|emb|CBI14312.1| putative GTP-binding protein [Streptococcus gallolyticus UCN34] Length = 436 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 10/137 (7%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + +F++ + Sbjct: 172 PDIIKFSLIGRPNVGKSSLINAILGEERVI-ASPIAGTTRDA---IDTNFTDSEGQ--EY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++I+ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRSMRAIDRSDIVLMVINAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLS 163 + IV+ K D + Sbjct: 284 EAGKGIIIVVNKWDTIE 300 >gi|223041036|ref|ZP_03611294.1| ribosome-associated GTPase EngA [Campylobacter rectus RM3267] gi|222877708|gb|EEF12831.1| ribosome-associated GTPase EngA [Campylobacter rectus RM3267] Length = 467 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 13/129 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G+ NVGKSSL N L R+ +A TS+ G T+ N + + + + L+D Sbjct: 4 IILVGKPNVGKSSLFNRLAGRR-IAITSDVSGTTRDTNKTIIEIYDK------SCVLIDS 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + KNV + + L+E + + ++D + D+ ++ L K + Sbjct: 57 GGLDDSSELFKNVKA------KTLAEARSSDAIIFMVDGKMMPSDEDKALYYALLKLNLP 110 Query: 152 YQIVLTKID 160 +V+ KID Sbjct: 111 TALVINKID 119 >gi|162447731|ref|YP_001620863.1| EngA family GTP-binding protein [Acholeplasma laidlawii PG-8A] gi|161985838|gb|ABX81487.1| GTP-binding protein, EngA family [Acholeplasma laidlawii PG-8A] Length = 438 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 13/150 (8%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I+FS GR NVGKSSL+N ++ + + + + T ++ KD ++ Sbjct: 174 ISFSVLGRPNVGKSSLVNAIIGEERVIVSDISGTTTDAIDTTFTKDKQK-------YTII 226 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G +N+D + L ERS + L++D G+++ D V ++ + Sbjct: 227 DTAGIKKRGKVYENLDKYSVLRAMTALERSDIAL--LVLDATAGIQEQDGHVAGYIMQYM 284 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 IV+ K D + + +T++K + IR Sbjct: 285 RGCIIVVNKWDLIEKDS--KTMKKFETEIR 312 >gi|170288479|ref|YP_001738717.1| tRNA modification GTPase TrmE [Thermotoga sp. RQ2] gi|205829186|sp|B1L9N6|MNME_THESQ RecName: Full=tRNA modification GTPase mnmE gi|170175982|gb|ACB09034.1| tRNA modification GTPase TrmE [Thermotoga sp. RQ2] Length = 450 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 23/172 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKS+L+N L+N ++ A ++ PG T+ V + ++ L +VD G Sbjct: 218 GKPNVGKSTLLNRLLN-EDRAIVTDIPGTTRD----VISEEIVIRGIL--FRIVDTAG-- 268 Query: 96 YARAPKKN-VDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 R+ + V+ G I R L E V ++D + + D+ + + K Y + Sbjct: 269 -VRSETNDLVERLG--IERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNK--RYLV 323 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ K+D + +E I+N ++ S++K +G+E L ++I Sbjct: 324 VINKVDVVEKINEEE--------IKNKLGTDRHMVKISALKGEGLEKLEESI 367 >gi|157364142|ref|YP_001470909.1| GTP-binding protein Era [Thermotoga lettingae TMO] gi|189037681|sp|A8F6R1|ERA_THELT RecName: Full=GTPase Era gi|157314746|gb|ABV33845.1| GTP-binding protein Era [Thermotoga lettingae TMO] Length = 296 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 71/176 (40%), Gaps = 20/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR N GKSSLIN + RK L S P T++ + D + + D Sbjct: 6 VTLVGRPNAGKSSLINSFIGRKVLI-VSEKPQTTRNKIRCIYTD------SYHQIIFTDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG K V G +V+ + + V ++D G + ++ + + Sbjct: 59 PGI------HKPVHRLGEFMVKVAIQAMKGVDLVLFVVDATKGFGEPEKRICDLVKLSKT 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KID E L KT I + +V TS VK +GIE L +AI Sbjct: 113 ETFLVINKID---LAKNYEFLAKT---IVSECDCFSKVFFTSVVKNEGIEELLQAI 162 >gi|20093588|ref|NP_613435.1| GTPase - translation elongation factor [Methanopyrus kandleri AV19] gi|19886447|gb|AAM01365.1| GTPase - translation elongation factor [Methanopyrus kandleri AV19] Length = 459 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 35/181 (19%), Positives = 72/181 (39%), Gaps = 15/181 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G + GK++L L + + A P + + FS+ + + LVD Sbjct: 6 VGLFGHIDHGKTALAAQLTEKPSTAALDKHP-EEKERGITIDLGFSSFELGDYTVTLVDA 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG+ LI ++ + L++ G + + L+ + Sbjct: 65 PGHA-------------DLIRTVVAGAEIIDAAILVVAADEGPQVQTGEHLVVLNHLGID 111 Query: 152 YQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++ L K+D + T + +E+ K +++ +IP S+ +GIE L+ A+LE + Sbjct: 112 RGVIALNKVDLVDEKTVERRIEEIKRVLQGTTLEDAPIIPVSAKIGEGIEDLKDALLEVL 171 Query: 211 N 211 Sbjct: 172 E 172 >gi|33593199|ref|NP_880843.1| GTP-binding protein EngA [Bordetella pertussis Tohama I] gi|33597408|ref|NP_885051.1| GTP-binding protein EngA [Bordetella parapertussis 12822] gi|33602148|ref|NP_889708.1| GTP-binding protein EngA [Bordetella bronchiseptica RB50] gi|41017018|sp|Q7VWL4|DER_BORPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|41017021|sp|Q7W6Q0|DER_BORPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|41017022|sp|Q7WHN4|DER_BORBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|33563574|emb|CAE42473.1| putative GTP-binding protein [Bordetella pertussis Tohama I] gi|33573835|emb|CAE38143.1| putative GTP-binding protein [Bordetella parapertussis] gi|33576586|emb|CAE33664.1| putative GTP-binding protein [Bordetella bronchiseptica RB50] gi|332382610|gb|AEE67457.1| GTP-binding protein EngA [Bordetella pertussis CS] Length = 451 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 11/176 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+LIN L+ + + + PG T+ + DF + + L+D Sbjct: 187 KLAIVGRPNVGKSTLINTLLGEERVI-AFDMPGTTRDA---IEIDF---ERDGRKYTLID 239 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +++ L V L+ID + V + D + F+ + Sbjct: 240 TAGLRKRGKVFEAIEKFS--VIKTLQAIEASNVVLLMIDAQAEVSEQDAHIAGFVLETGR 297 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K D L + + + +R A I S++K +G++ L K++ Sbjct: 298 AVVVAINKWDGLDSDQRERIEREFQRKLRFLGFARMHTI--SALKGQGVKPLLKSV 351 >gi|331675079|ref|ZP_08375836.1| selenocysteine-specific translation elongation factor [Escherichia coli TA280] gi|331067988|gb|EGI39386.1| selenocysteine-specific translation elongation factor [Escherichia coli TA280] Length = 614 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVNEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|227514773|ref|ZP_03944822.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931] gi|260663644|ref|ZP_05864533.1| GTP-binding protein [Lactobacillus fermentum 28-3-CHN] gi|227086882|gb|EEI22194.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931] gi|260551870|gb|EEX24985.1| GTP-binding protein [Lactobacillus fermentum 28-3-CHN] Length = 435 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 37/190 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK----DFSNLKNNLPAM 86 ++ G +VGKS+L++++ K PK +F+ L NL + Sbjct: 162 DVGLIGFPSVGKSTLLSVVTGAK-------------------PKIAAYEFTTLVPNLGMV 202 Query: 87 ALVDMPGYGYARAPKK-NVDSWG-GLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L D + A P N S G GL +++L R + L+D + ++ + F Sbjct: 203 MLPDGRDFAMADMPGLINGASKGVGLGLQFLRHIERTRVLLHLVDLGNQDAELALEKFHD 262 Query: 145 LDKKAVSY--------QIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSV 194 ++K+ SY QIV+ K+ AQE L++ K L+ T P+V S+V Sbjct: 263 INKELASYDPELLKRPQIVVAT--KMDLPEAQEHLDEFKKLLEADDTLPETPQVFAISAV 320 Query: 195 KRKGIEVLRK 204 G++ L + Sbjct: 321 THAGVQELMQ 330 >gi|24374819|ref|NP_718862.1| GTP-binding protein EngA [Shewanella oneidensis MR-1] gi|37999695|sp|Q8EC36|DER_SHEON RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|24349505|gb|AAN56306.1|AE015769_2 GTP-binding protein EngA [Shewanella oneidensis MR-1] Length = 487 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ + + Sbjct: 198 PIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRD-SIYIP-----MERDGREYVI 250 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +++ L V L+ID R GV + D + F Sbjct: 251 IDTAGVRRRSKVHEVIEKFS--VIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFALNA 308 Query: 149 AVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 309 GRALVIAVNKWDGID 323 >gi|157155659|ref|YP_001465067.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli E24377A] gi|191165297|ref|ZP_03027140.1| selenocysteine-specific translation elongation factor [Escherichia coli B7A] gi|193061782|ref|ZP_03042879.1| selenocysteine-specific translation elongation factor [Escherichia coli E22] gi|194427450|ref|ZP_03059999.1| selenocysteine-specific translation elongation factor [Escherichia coli B171] gi|256020942|ref|ZP_05434807.1| selenocysteinyl-tRNA-specific translation factor [Shigella sp. D9] gi|260846695|ref|YP_003224473.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O103:H2 str. 12009] gi|300822001|ref|ZP_07102144.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 119-7] gi|300925675|ref|ZP_07141536.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 182-1] gi|301328369|ref|ZP_07221464.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 78-1] gi|331670429|ref|ZP_08371268.1| selenocysteine-specific translation elongation factor [Escherichia coli TA271] gi|331679675|ref|ZP_08380345.1| selenocysteine-specific translation elongation factor [Escherichia coli H591] gi|332282164|ref|ZP_08394577.1| selenocysteinyl-tRNA-specific translation factor [Shigella sp. D9] gi|157077689|gb|ABV17397.1| selenocysteine-specific translation elongation factor [Escherichia coli E24377A] gi|190904699|gb|EDV64405.1| selenocysteine-specific translation elongation factor [Escherichia coli B7A] gi|192932572|gb|EDV85169.1| selenocysteine-specific translation elongation factor [Escherichia coli E22] gi|194414490|gb|EDX30763.1| selenocysteine-specific translation elongation factor [Escherichia coli B171] gi|257761842|dbj|BAI33339.1| selenocysteinyl-tRNA-specific translation factor [Escherichia coli O103:H2 str. 12009] gi|300418229|gb|EFK01540.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 182-1] gi|300525364|gb|EFK46433.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 119-7] gi|300845194|gb|EFK72954.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 78-1] gi|320201385|gb|EFW75966.1| Selenocysteine-specific translation elongation factor [Escherichia coli EC4100B] gi|323160638|gb|EFZ46577.1| selenocysteine-specific translation elongation factor [Escherichia coli E128010] gi|331062491|gb|EGI34411.1| selenocysteine-specific translation elongation factor [Escherichia coli TA271] gi|331072847|gb|EGI44172.1| selenocysteine-specific translation elongation factor [Escherichia coli H591] gi|332104516|gb|EGJ07862.1| selenocysteinyl-tRNA-specific translation factor [Shigella sp. D9] Length = 614 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVNEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|323934861|gb|EGB31243.1| selenocysteine-specific translation elongation protein [Escherichia coli E1520] Length = 614 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|309797547|ref|ZP_07691936.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 145-7] gi|308118817|gb|EFO56079.1| selenocysteine-specific translation elongation factor [Escherichia coli MS 145-7] Length = 614 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVNEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|260588686|ref|ZP_05854599.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583] gi|260541161|gb|EEX21730.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583] Length = 441 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 13/136 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA--MA 87 P+IA G+ NVGKSSLIN ++ + SN G T +D + K Sbjct: 178 PKIAVVGKPNVGKSSLINKILGEDRVI-VSNIAGTT--------RDAIDTKVTYQGKEYT 228 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G K+ ++ + I+R ++ V ++ID GV + D + Sbjct: 229 FIDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVVMMIDATEGVTEQDAKIAGIAHD 286 Query: 148 KAVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 287 RGKGVVIAVNKWDAIE 302 >gi|119598445|gb|EAW78039.1| large subunit GTPase 1 homolog (S. cerevisiae), isoform CRA_f [Homo sapiens] Length = 663 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|169612157|ref|XP_001799496.1| hypothetical protein SNOG_09195 [Phaeosphaeria nodorum SN15] gi|111062267|gb|EAT83387.1| hypothetical protein SNOG_09195 [Phaeosphaeria nodorum SN15] Length = 656 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 13 IFLRGVPEIGLLP--KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +FL P++ P + I G NVGKSS IN L+ K ++ S PG+T+H Sbjct: 340 LFLEHAPDVDTGPGGEKRKTSIGLVGYPNVGKSSTINALIGAKKVS-VSATPGKTKHFQ 397 >gi|7023874|dbj|BAA92116.1| unnamed protein product [Homo sapiens] Length = 642 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|325479528|gb|EGC82624.1| ribosome biogenesis GTPase Der [Anaerococcus prevotii ACS-065-V-Col13] Length = 439 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 9/135 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ N GKSSL+N+L+N + T A ++ + + +N L+D Sbjct: 178 IAIIGKPNAGKSSLVNLLLNEDRMIVTDIAGTTRDAVDSYWTYNDNN-------YVLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+NV+ + R + LID GV + D + + + Sbjct: 231 AGLRRKSKVKENVEYYANQ--RTFDAVDSAEVCLFLIDANVGVTEQDAKIAGYAHNNKKA 288 Query: 152 YQIVLTKIDKLSPTT 166 I + K D + T Sbjct: 289 MIIAVNKWDLVDKDT 303 >gi|223044391|ref|ZP_03614425.1| GTP-binding protein Era [Staphylococcus capitis SK14] gi|314933739|ref|ZP_07841104.1| GTP-binding protein Era [Staphylococcus caprae C87] gi|222442260|gb|EEE48371.1| GTP-binding protein Era [Staphylococcus capitis SK14] gi|313653889|gb|EFS17646.1| GTP-binding protein Era [Staphylococcus caprae C87] Length = 300 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 32/164 (19%), Positives = 67/164 (40%), Gaps = 17/164 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+ +N ++ K + A + + +D + + +D Sbjct: 10 VSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQI-------IFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + + + + S + + +++ + + D+ + L Sbjct: 63 PG---IHKPKHKLGDYMMRVAK--NTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNVKTP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +VL KID + P +EK K + E+IP S+++ Sbjct: 118 IFLVLNKIDLVHPDALMPRIEKYKEYM-----DFTEIIPISALE 156 >gi|117938785|gb|AAH15042.1| LSG1 protein [Homo sapiens] Length = 648 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|15643037|ref|NP_228080.1| tRNA modification GTPase TrmE [Thermotoga maritima MSB8] gi|14195303|sp|Q9WYA4|MNME_THEMA RecName: Full=tRNA modification GTPase mnmE gi|4980765|gb|AAD35356.1|AE001709_2 thiophene oxidation protein ThdF-related GTPase [Thermotoga maritima MSB8] Length = 450 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 23/172 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKS+L+N L+N ++ A ++ PG T+ V + ++ L +VD G Sbjct: 218 GKPNVGKSTLLNRLLN-EDRAIVTDIPGTTRD----VISEEIVIRGIL--FRIVDTAG-- 268 Query: 96 YARAPKKN-VDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 R+ + V+ G I R L E V ++D + + D+ + + K Y + Sbjct: 269 -VRSETNDLVERLG--IERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNK--RYLV 323 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ K+D + +E I+N ++ S++K +G+E L ++I Sbjct: 324 VINKVDVVEKINEEE--------IKNKLGTDRHMVKISALKGEGLEKLEESI 367 >gi|88703550|ref|ZP_01101266.1| GTP-binding protein era [Congregibacter litoralis KT71] gi|88702264|gb|EAQ99367.1| GTP-binding protein era [Congregibacter litoralis KT71] Length = 299 Score = 35.4 bits (80), Expect = 5.7, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 9/70 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + + M VD Sbjct: 10 VAIVGRPNVGKSTLLNHLLGQK-LSITSRKPQTTRHQVLGIK------TTDTAQMLFVDT 62 Query: 92 PGY--GYARA 99 PG G RA Sbjct: 63 PGIHGGEDRA 72 >gi|291400439|ref|XP_002716566.1| PREDICTED: nucleostemin 3-like [Oryctolagus cuniculus] Length = 659 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 384 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 433 Query: 86 MALVDMPG 93 + L D PG Sbjct: 434 LCLCDCPG 441 >gi|291276972|ref|YP_003516744.1| putative GTP-binding protein [Helicobacter mustelae 12198] gi|290964166|emb|CBG40011.1| putative GTP-binding protein [Helicobacter mustelae 12198] Length = 466 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 30/192 (15%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LPK +I GR NVGKSSL+N LV + R+ +P L+ P D + + Sbjct: 193 LPKI---KIGIIGRVNVGKSSLLNALVGKD---RSVVSPIEGTTLD---PVDEGIIYKDY 243 Query: 84 PAMALVDMPGY---GYARAPKK-NVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + VD G G R +K +D G ++ E+S + L++D +D+ Sbjct: 244 -QLEFVDTAGLRRRGKIRGLEKFALDRTGKML-----EKSDI--ALLVLDVSTAFVDLDE 295 Query: 140 DVFSFLDKKAVSYQIVLTKID---KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + S +DK + IVL K D + +E K ++L + +I S++ + Sbjct: 296 KISSLVDKYTLGIIIVLNKWDIRIAEYKSIIEELRRKFRFL------EYAPIITVSALNK 349 Query: 197 KGIEVLRKAILE 208 + I+ L++ IL+ Sbjct: 350 RHIKELKEKILQ 361 >gi|225867922|ref|YP_002743870.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus] gi|225701198|emb|CAW98121.1| GTP-binding protein EngA [Streptococcus equi subsp. zooepidemicus] Length = 446 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 10/134 (7%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + + S G T+ D S + A ++ Sbjct: 185 IRFSLIGRPNVGKSSLINAILGEERVI-ASPVAGTTRD-----AIDTSFTDESGQAYTMI 238 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +N + + + +RS + V ++I+ G++ D+ + F + Sbjct: 239 DTAGMRKSGKVYENTEKYSVMRAMRAIDRSDI--VLMVINAEEGIRDYDKRIAGFAHEAG 296 Query: 150 VSYQIVLTKIDKLS 163 IV+ K D + Sbjct: 297 KGMIIVVNKWDTIE 310 >gi|104774144|ref|YP_619124.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514234|ref|YP_813140.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275034|sp|Q04A20|ERA_LACDB RecName: Full=GTPase Era gi|122983938|sp|Q1G9W6|ERA_LACDA RecName: Full=GTPase Era gi|103423225|emb|CAI98053.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093549|gb|ABJ58702.1| GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125924|gb|ADY85254.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 301 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 22/177 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N L+ +K +A TS P T++ + D + V Sbjct: 12 VALVGRPNVGKSTLMNRLIGQK-VAITSAKPQTTRNKISGIYTEDDMQ--------VVFV 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG + + ++D + + LS + V ++D + K ++ V L Sbjct: 63 DTPGIFKSHS---DLDEY--MDKASLSSLKDVDLVMFMVDAKEAGKG-EEYVAGLLKDLD 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V+ KID++ P ++ + + + E +P S+ + G++ L K + Sbjct: 117 IPVFLVINKIDQVHPNELLPIIDSYQAVGK-----FAEFLPISARQGNGVDDLLKTL 168 >gi|47225762|emb|CAG08105.1| unnamed protein product [Tetraodon nigroviridis] Length = 222 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 103 KDGQLTVGLVGYPNVGKSSTINTILRNKKVS-VSATPGHTKHFQTLYVE---------PG 152 Query: 86 MALVDMPG 93 + L D PG Sbjct: 153 LCLCDCPG 160 >gi|328766441|gb|EGF76495.1| hypothetical protein BATDEDRAFT_92551 [Batrachochytrium dendrobatidis JAM81] Length = 1107 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 11/121 (9%) Query: 102 KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK----------AVS 151 +++ + +I++Y E ST YL + +++ S L +K A + Sbjct: 741 QSLSTASNMILKYHCEASTSAMQYLSSQVNLDRFKAAEEMLSVLGEKLGIHGTHTMSAAA 800 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 Y ++ K+D L Q L+ YL+ N HP+ S ++ V K I ETI+ Sbjct: 801 YACIIIKLDDLDKNIHQRLLDLQAYLLSNNDLTHPDS-QDSETRQSDSMVHIKMIQETID 859 Query: 212 Y 212 + Sbjct: 860 F 860 >gi|257061940|ref|YP_003139828.1| tRNA modification GTPase TrmE [Cyanothece sp. PCC 8802] gi|256592106|gb|ACV02993.1| tRNA modification GTPase TrmE [Cyanothece sp. PCC 8802] Length = 460 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N + + A ++ PG T+ + + + +P + ++D Sbjct: 228 VAIVGRPNVGKSSLLNAW-SCSDRAIVTDLPGTTRDV-----VESQLIVGGIP-IQVLDT 280 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G R+++ ++ L V L ID + G D+ ++ + + + Sbjct: 281 AGI---RETADRVEKLGVERSRHVASQADL--VLLTIDAQMGWTTEDEAIYQQVQHRPLI 335 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID L + + + K +++ T + + +GIE L KAIL ++ Sbjct: 336 --LVINKID-LGLADSLSFIPQIK-----------QIVKTVAAQNQGIEQLEKAILASVE 381 >gi|195387361|ref|XP_002052364.1| GJ17511 [Drosophila virilis] gi|194148821|gb|EDW64519.1| GJ17511 [Drosophila virilis] Length = 576 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 12/59 (20%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVDMPG 93 G NVGKSSLIN + RK + S PG T+H F+ LP + L D PG Sbjct: 344 GFPNVGKSSLINAIKGRK-VVSVSRTPGHTKHFQTIFL----------LPNVRLCDCPG 391 >gi|33860948|ref|NP_892509.1| GTP-binding protein EngA [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|41017012|sp|Q7V2S6|DER_PROMP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|33639680|emb|CAE18850.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 458 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 13/127 (10%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N + K + + T ++ + KD S+L +VD G Sbjct: 184 GRPNVGKSSLLNAICGEKRAIVSDISGTTTDSIDTLIKKD-SHL------WKIVDTAGIR 236 Query: 96 YARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 + K + +G I R +RS + CV L+ID GV DQ + ++++ + Sbjct: 237 RKKNVKYGTEFFG--INRAFKSIDRSDV-CV-LVIDAIDGVTDQDQKLAGRIEEQGRACV 292 Query: 154 IVLTKID 160 IV+ K D Sbjct: 293 IVVNKWD 299 >gi|114046809|ref|YP_737359.1| GTP-binding protein EngA [Shewanella sp. MR-7] gi|123131595|sp|Q0HX53|DER_SHESR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|113888251|gb|ABI42302.1| small GTP-binding protein [Shewanella sp. MR-7] Length = 488 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ + + Sbjct: 198 PIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRD-SIYIP-----MERDGREYVI 250 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +++ L V L+ID R GV + D + F Sbjct: 251 IDTAGVRRRSKVHEVIEKFS--VIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFALNA 308 Query: 149 AVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 309 GRALVIAVNKWDGID 323 >gi|330828483|ref|YP_004391435.1| GTP-binding protein era [Aeromonas veronii B565] gi|328803619|gb|AEB48818.1| GTP-binding protein era [Aeromonas veronii B565] Length = 299 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 78/178 (43%), Gaps = 26/178 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H + + ++N + VD Sbjct: 10 VAIVGRPNVGKSTLLNKLLGQK-VSITSKKPQTTRHRILGI-----DTEDNYQTI-YVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERST-----LRCVYLLIDCRHGVKQIDQDVFSFLD 146 PG N R ++ +T + V ++D H K D+ V L Sbjct: 63 PGLHIEEKRAIN---------RLMNRAATSSLGDVAMVVFMVDGTHWTKD-DEMVLGKLR 112 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + KID + ++ L ++L + AH ++P S+ K +E +R+ Sbjct: 113 NLKCPVVLAVNKIDNVKE--KEDLLPHLEWLGQQMNFAH--ILPISAEKGTNVEKIRE 166 >gi|326912605|ref|XP_003202639.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 5B-like [Meleagris gallopavo] Length = 1259 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 27/145 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFS 77 P I G + GK+ +++ L R + S A G TQ + VP K+F Sbjct: 671 PVICVLGHVDTGKTKILDKL--RHTHVQDSEAGGITQQIGATNVPLEAINEQTKMVKNFD 728 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 +P M ++D PG+ +S+ L R S L++D HG++ Sbjct: 729 RENIKIPGMLIIDTPGH----------ESFSNLRNRG---SSLCDIAILVVDIMHGLEPQ 775 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL 162 + + L K + + L KID+L Sbjct: 776 TIESINLLKSKKCPFIVALNKIDRL 800 >gi|291484708|dbj|BAI85783.1| GTP-binding protein EngA [Bacillus subtilis subsp. natto BEST195] Length = 436 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 13/175 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ V F+ N +VD G Sbjct: 182 GRPNVGKSSLVNAMLGEERVI-VSNVAGTTRDA---VDTSFT---YNQQEFVIVDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 + + + ++R L V +++D G+ + D+ + + + + IV Sbjct: 235 KKGKVYETTEKYS--VLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHEAGKAVVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAILE 208 + K D + + T+++ + IR++ + ++ S++ +K I L AI++ Sbjct: 293 VNKWDAVDKD--ESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIK 345 >gi|241956554|ref|XP_002420997.1| uncharacterized GTPase, putative [Candida dubliniensis CD36] gi|223644340|emb|CAX41153.1| uncharacterized GTPase, putative [Candida dubliniensis CD36] Length = 678 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 12/83 (14%) Query: 13 IFLRGVPEIGLLPK--AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 +F+ P+ + P+ +I G NVGKSS IN LV K ++ S+ PG+T+H Sbjct: 327 LFMDSAPKFEVDPEFPDRKLQIGLVGYPNVGKSSTINALVGSKKVS-VSSTPGKTKH--- 382 Query: 71 FVPKDFSNLKNNLPAMALVDMPG 93 F S P + L D PG Sbjct: 383 FQTIHLS------PDVLLCDCPG 399 >gi|94311040|ref|YP_584250.1| GTP-binding protein EngA [Cupriavidus metallidurans CH34] gi|123383733|sp|Q1LLJ5|DER_RALME RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|93354892|gb|ABF08981.1| GTP-binding protein [Cupriavidus metallidurans CH34] Length = 447 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 11/147 (7%) Query: 19 PEIGLLPKAGPP--EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PE+ AG +IA GR NVGKS+L+N L+ + + + PG T+ + Sbjct: 168 PELADQEDAGQHGVKIAIVGRPNVGKSTLVNTLIGEERVI-AFDMPGTTRDAIYV----- 221 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + L+D G + ++ + +V+ L + V LL+D + + + Sbjct: 222 -EFERGGKPYTLIDTAGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISE 278 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLS 163 D + F+ + + + + K D L Sbjct: 279 QDAHIAGFIVESGRALVVGVNKWDGLD 305 >gi|296269475|ref|YP_003652107.1| small GTP-binding protein [Thermobispora bispora DSM 43833] gi|296092262|gb|ADG88214.1| small GTP-binding protein [Thermobispora bispora DSM 43833] Length = 476 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 53/136 (38%), Gaps = 9/136 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 GP +A GR NVGKSSL+N + + + PG T+ P D ++ Sbjct: 211 GPRRVALVGRPNVGKSSLLNRMAGEERVL-VDPMPGTTRD-----PVD-ELIELGGKTYR 263 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 VD G K D + + R ERS +LID + + D + S + + Sbjct: 264 FVDTAGIRRRDRELKGADFYAAMRTRSALERS--EAAVVLIDASEPLTEQDLRIISLVAE 321 Query: 148 KAVSYQIVLTKIDKLS 163 + + K D L Sbjct: 322 SGRAMVLAFNKWDLLD 337 >gi|317131002|ref|YP_004097284.1| tRNA modification GTPase TrmE [Bacillus cellulosilyticus DSM 2522] gi|315475950|gb|ADU32553.1| tRNA modification GTPase TrmE [Bacillus cellulosilyticus DSM 2522] Length = 458 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ N A + G T+ V +++ N++ +P + L+D G Sbjct: 227 GRPNVGKSSLLNNLVH-DNKAIVTEIAGTTRD----VIEEYVNVR-GVP-LRLLDTAGI- 278 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R V+ G + R V L+++ + + D+++F K I+ Sbjct: 279 --RETDDVVEKIG--VERSRKVVGDAELVLLVLNYNEELTESDEELFHI--SKGKERIII 332 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D + +E+ K L P ++ TS +K +G++ L +AI Sbjct: 333 INKTD----LERKINMERVKQLANEAP-----IVSTSLIKDEGVDELEEAI 374 >gi|195434020|ref|XP_002065001.1| GK14912 [Drosophila willistoni] gi|194161086|gb|EDW75987.1| GK14912 [Drosophila willistoni] Length = 576 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 12/74 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN L RK + S PG T+H F+ P + L D Sbjct: 336 IGCIGFPNVGKSSLINALKGRK-VVSVSRTPGHTKHFQTIFL----------TPLVRLCD 384 Query: 91 MPGYGYARAPKKNV 104 PG + A K++ Sbjct: 385 CPGLVFPSATPKSL 398 >gi|189235276|ref|XP_973489.2| PREDICTED: similar to mmr1/hsr1 GTP binding protein [Tribolium castaneum] Length = 1234 Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust. Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 13/78 (16%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G+ NVGKSSLIN ++ +K + S PG T+H F+ P Sbjct: 987 KNGILTIGCLGQPNVGKSSLINAIMGKK-VVSVSRTPGHTKHFQTIFL----------TP 1035 Query: 85 AMALVDMPGYGY-ARAPK 101 + L D PG + ++ PK Sbjct: 1036 NVRLCDCPGLVFPSKTPK 1053 >gi|332345560|gb|AEE58894.1| selenocysteine-specific translation elongation factor protein [Escherichia coli UMNK88] Length = 614 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 31/55 (56%) Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + LTK D++ E + K ++R Y A ++ T++ + +GI+ LR+ +L+ Sbjct: 109 VALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREHLLQ 163 >gi|288554601|ref|YP_003426536.1| tRNA modification GTPase TrmE [Bacillus pseudofirmus OF4] gi|288545761|gb|ADC49644.1| tRNA modification GTPase TrmE [Bacillus pseudofirmus OF4] Length = 456 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 32/213 (15%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEI-------AFSGRSNVGKSSLINILVNRK 53 +V+H + + A R + + LL A +I GR NVGKSSL+N LV+ + Sbjct: 185 VVTHDLLIEKANFVEREIDK--LLGTANQGKILREGLSTVIVGRPNVGKSSLLNSLVHEE 242 Query: 54 NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVR 113 A ++ G T+ V +++ N++ +P + LVD G R + V+ G R Sbjct: 243 K-AIVTDIAGTTRD----VIEEYVNVR-GVP-LRLVDTAGI---RETEDMVERIGVERSR 292 Query: 114 YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 + + + L + L+++ + D+ +F +AV + V+ ++K T ++ ++ Sbjct: 293 QVLKEAEL--ILLVLNYGEELSSEDEALF-----EAVKHLNVIVIVNK---TDVEQKIDL 342 Query: 174 TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +R P V+ TS +K +G++ L AI Sbjct: 343 NR--VRELAEGRP-VVTTSLIKDEGVDELESAI 372 >gi|218291088|ref|ZP_03495111.1| tRNA modification GTPase TrmE [Alicyclobacillus acidocaldarius LAA1] gi|218238973|gb|EED06180.1| tRNA modification GTPase TrmE [Alicyclobacillus acidocaldarius LAA1] Length = 465 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 7/61 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N LV R + A ++ PG T+ V +++ NL+ +P + L+D Sbjct: 231 AIVGRPNVGKSSLLNALVER-DRAIVTDLPGTTRD----VLEEYINLR-GIP-LRLIDTA 283 Query: 93 G 93 G Sbjct: 284 G 284 >gi|149236361|ref|XP_001524058.1| hypothetical protein LELG_04871 [Lodderomyces elongisporus NRRL YB-4239] gi|146452434|gb|EDK46690.1| hypothetical protein LELG_04871 [Lodderomyces elongisporus NRRL YB-4239] Length = 718 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 10/63 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I G NVGKSS IN L+ K ++ S+ PG+T+H F L + P + L D Sbjct: 391 QIGLVGYPNVGKSSTINALIGSKKVS-VSSTPGKTKH--------FQTL-HLTPEVLLCD 440 Query: 91 MPG 93 PG Sbjct: 441 CPG 443 >gi|118600911|gb|AAH40119.1| LSG1 protein [Homo sapiens] Length = 649 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|117646680|emb|CAL37455.1| hypothetical protein [synthetic construct] Length = 658 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|157826149|ref|YP_001493869.1| tRNA modification GTPase TrmE [Rickettsia akari str. Hartford] gi|166234814|sp|A8GPN6|MNME_RICAH RecName: Full=tRNA modification GTPase mnmE gi|157800107|gb|ABV75361.1| tRNA modification GTPase TrmE [Rickettsia akari str. Hartford] Length = 445 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 14/147 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G N GKSSL+N L+ R ++A SN G T +D ++ ++ Sbjct: 217 KLAIVGPPNTGKSSLLNFLMQR-DIAMVSNIAGTT--------RDIIEGHLDIGGYPIIL 267 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ G I R ++ T ++ D + I++D+ +D+ + Sbjct: 268 QDTAGIREESSDIIEQEG--IKRAINSAKTADIKIIMFDAKKLDSSINEDITGLIDENTI 325 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYL 177 +++ KID + P+ +K K L Sbjct: 326 ---VIINKIDLIEPSKVFSIEDKYKCL 349 >gi|313125615|ref|YP_004035885.1| GTP-binding protein hflx [Halogeometricum borinquense DSM 11551] gi|312291980|gb|ADQ66440.1| GTP-binding protein HflX [Halogeometricum borinquense DSM 11551] Length = 455 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 21/188 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL-------- 83 + +G +N GKS+L++ L + +L T P + + F L+ Sbjct: 211 VTVAGYTNAGKSTLLHRLADDLSLDSTERHPDEANSVAAVEDRLFKTLQTTTRRATLEGR 270 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV-- 141 P +A D G+ P V+S+ I SE + V L+ D V+ + + + Sbjct: 271 PVLA-TDTVGF-VDDLPHWLVESFSTTI----SEAAAADIVVLVADASDDVETLREKIRV 324 Query: 142 -FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 S D + V Q V+T ++K T E + + + P V+P S V+ +E Sbjct: 325 SLSVFDAQGVETQNVVTALNKTDLLTDAECESR----VAAAESLAPRVVPVSVVEETNLE 380 Query: 201 VLRKAILE 208 L + + + Sbjct: 381 TLVEVVCD 388 >gi|71064910|ref|YP_263637.1| GTP-binding protein Era [Psychrobacter arcticus 273-4] gi|71037895|gb|AAZ18203.1| probable GTP-binding protein Era [Psychrobacter arcticus 273-4] Length = 330 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 7/62 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + L N+ VD Sbjct: 33 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHRIHGI------LSNDEMQAVFVDT 85 Query: 92 PG 93 PG Sbjct: 86 PG 87 >gi|16079341|ref|NP_390165.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. 168] gi|221310200|ref|ZP_03592047.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. 168] gi|221314523|ref|ZP_03596328.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319445|ref|ZP_03600739.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. JH642] gi|221323721|ref|ZP_03605015.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. SMY] gi|321311754|ref|YP_004204041.1| GTP-binding protein Der [Bacillus subtilis BSn5] gi|1730915|sp|P50743|DER_BACSU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|1146219|gb|AAC83966.1| similar to Escherichia coli GTP-binding protein Era; putative [Bacillus subtilis subsp. subtilis str. 168] gi|2634702|emb|CAB14200.1| GTPase essential for ribosome 50S subunit assembly [Bacillus subtilis subsp. subtilis str. 168] gi|320018028|gb|ADV93014.1| GTP-binding protein Der [Bacillus subtilis BSn5] Length = 436 Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 13/175 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ V F+ N +VD G Sbjct: 182 GRPNVGKSSLVNAMLGEERVI-VSNVAGTTRDA---VDTSFT---YNQQEFVIVDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 + + + ++R L V +++D G+ + D+ + + + + IV Sbjct: 235 KKGKVYETTEKYS--VLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHEAGKAVVIV 292 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAILE 208 + K D + + T+++ + IR++ + ++ S++ +K I L AI++ Sbjct: 293 VNKWDAVDKD--ESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIK 345 >gi|300812180|ref|ZP_07092622.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123894|ref|YP_004034153.1| GTP-binding protein era-like protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300496816|gb|EFK31896.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312280457|gb|ADQ61176.1| GTP-binding protein era-like protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325686031|gb|EGD28089.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 301 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 22/177 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A GR NVGKS+L+N L+ +K +A TS P T++ + D + V Sbjct: 12 VALVGRPNVGKSTLMNRLIGQK-VAITSAKPQTTRNKISGIYTEDDMQ--------VVFV 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D PG + + ++D + + LS + V ++D + K ++ V L Sbjct: 63 DTPGIFKSHS---DLDEY--MDKASLSSLKDVDLVMFMVDAKEAGKG-EEYVAGLLKDLD 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V+ KID++ P ++ + + + E +P S+ + G++ L K + Sbjct: 117 IPVFLVINKIDQVHPNDLLPIIDSYQAVGK-----FAEFLPISARQGNGVDDLLKTL 168 >gi|110757680|ref|XP_396436.3| PREDICTED: nucleostemin 4 [Apis mellifera] Length = 583 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 12/69 (17%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSL+N L+ +K + S PG T+H F+ K Sbjct: 331 KNGVLSIGCIGTPNVGKSSLMNALMGKK-VVSVSRTPGHTKHFQTIFLTK---------- 379 Query: 85 AMALVDMPG 93 + L D PG Sbjct: 380 TVCLCDCPG 388 >gi|12053291|emb|CAB66831.1| hypothetical protein [Homo sapiens] gi|46329581|gb|AAH68500.1| Large subunit GTPase 1 homolog (S. cerevisiae) [Homo sapiens] gi|261858190|dbj|BAI45617.1| large subunit GTPase 1 homolog [synthetic construct] gi|294661812|dbj|BAG72607.2| large subunit GTPase 1 homolog [synthetic construct] Length = 658 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|222152562|ref|YP_002561737.1| GTP-binding protein EngA [Streptococcus uberis 0140J] gi|254783170|sp|B9DTQ3|DER_STRU0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|222113373|emb|CAR41004.1| GTP-binding protein EngA [Streptococcus uberis 0140J] Length = 436 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 12/135 (8%) Query: 32 IAFS--GRSNVGKSSLIN-ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 I FS GR NVGKSSLIN IL + +A R F +D + Sbjct: 175 IRFSLIGRPNVGKSSLINAILGEERVIASPVAGTTRDAIDTHFTDQDGQEYN-------M 227 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + +N + + + +RS + V L+I+ G+++ D+ + F + Sbjct: 228 IDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLLVINAEEGIREYDKRIAGFAHEA 285 Query: 149 AVSYQIVLTKIDKLS 163 IV+ K D L Sbjct: 286 GKGMIIVVNKWDLLE 300 >gi|223029424|ref|NP_060855.2| large subunit GTPase 1 homolog [Homo sapiens] gi|172045910|sp|Q9H089|LSG1_HUMAN RecName: Full=Large subunit GTPase 1 homolog; Short=hLsg1 Length = 658 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 10/68 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G + G NVGKSS IN ++ K ++ S PG T+H + P Sbjct: 383 KDGQLTVGLVGYPNVGKSSTINTIMGNKKVS-VSATPGHTKHFQTLYVE---------PG 432 Query: 86 MALVDMPG 93 + L D PG Sbjct: 433 LCLCDCPG 440 >gi|163797497|ref|ZP_02191448.1| GTP-binding protein engA [alpha proteobacterium BAL199] gi|159177246|gb|EDP61805.1| GTP-binding protein engA [alpha proteobacterium BAL199] Length = 467 Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 22/36 (61%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNL 55 E+ P+ GP +A GR NVGKS+L+N L+ L Sbjct: 190 EMEAEPEVGPIRLAIVGRPNVGKSTLVNRLIGEDRL 225 >gi|326430802|gb|EGD76372.1| hypothetical protein PTSG_01072 [Salpingoeca sp. ATCC 50818] Length = 388 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 10/64 (15%) Query: 34 FSGRSNVGKSSLIN----ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 +G NVGKSSL+N +L N++ ART + PG T+ V +D ++ P + ++ Sbjct: 143 IAGMPNVGKSSLVNTLRSVLANKRKCARTGDRPGVTR----TVQQDVK--IHDDPPVYIL 196 Query: 90 DMPG 93 D PG Sbjct: 197 DTPG 200 >gi|262371080|ref|ZP_06064402.1| GTPase [Acinetobacter johnsonii SH046] gi|262313966|gb|EEY95011.1| GTPase [Acinetobacter johnsonii SH046] Length = 469 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ + + + PG T+ + ++P + + L+D Sbjct: 179 LAIIGRPNVGKSTLVNRLLGEERVV-AFDQPGTTRD-SIYIPYERDGRQ-----YTLIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + IV+ L + +++D R GV + D + + + + Sbjct: 232 AGVRRKGKVDEMIEKFS--IVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYALEAGRA 289 Query: 152 YQIVLTKIDKLS 163 I + K D +S Sbjct: 290 MVIAINKWDNMS 301 >gi|205374162|ref|ZP_03226962.1| GTP-binding protein Era [Bacillus coahuilensis m4-4] Length = 306 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+ +N ++ +K +A S+ P T++ K L + +D Sbjct: 15 VSIIGRPNVGKSTFLNRVIGQK-IAIMSDKPQTTRN------KVQGVLTLADSQIVFIDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG PK + G +++ ++TL+ V ++D G+ + D+ + L Sbjct: 68 PGI---HKPKHKL---GDFMMKV--AQNTLKEVDIVLFMVDVAEGIGKGDEFIIEKLKNV 119 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +VL KID + P +E +Y R T E++P S+++ ++ L Sbjct: 120 STPVFLVLNKIDAIHPDELFSIIE--EYRSRFEFT---EIVPISALEGNNVDTL 168 >gi|126654071|ref|ZP_01725897.1| ribosomal biogenesis GTPase [Bacillus sp. B14905] gi|126589451|gb|EAZ83598.1| ribosomal biogenesis GTPase [Bacillus sp. B14905] Length = 281 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G+ P+A I G NVGKS+LIN L +KN+A+T N PG T+ Sbjct: 106 GMKPRAIRAMIV--GIPNVGKSTLINRLA-KKNIAKTGNTPGVTK 147 >gi|302386477|ref|YP_003822299.1| ribosome-associated GTPase EngA [Clostridium saccharolyticum WM1] gi|302197105|gb|ADL04676.1| ribosome-associated GTPase EngA [Clostridium saccharolyticum WM1] Length = 442 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 29/175 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + D + L N L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAG-DTISIVKDTPGVTRDR---IYADCTWLDMNF---TLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSER-----STLRCVYLLIDCRHGVKQIDQDVFSF 144 D G P + +I+ + E+ +T + ++D R G+ D V Sbjct: 57 DTGGI----EPDSS-----DIILSQMREQAEIAIATADVIIFIVDVRQGLVDADSKVADM 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L K + + K+D + Y N P IP S+ R G+ Sbjct: 108 LRKSKKPIVLAVNKVDSF------QKFGNDVYEFYNLGIGDP--IPVSAASRLGL 154 >gi|257791391|ref|YP_003181997.1| GTP-binding protein Era [Eggerthella lenta DSM 2243] gi|325831362|ref|ZP_08164616.1| ribosome biogenesis GTPase Era [Eggerthella sp. HGA1] gi|257475288|gb|ACV55608.1| GTP-binding protein Era [Eggerthella lenta DSM 2243] gi|325486616|gb|EGC89064.1| ribosome biogenesis GTPase Era [Eggerthella sp. HGA1] Length = 307 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 44/143 (30%), Positives = 62/143 (43%), Gaps = 16/143 (11%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P +G K+G + GR N GKS+LIN ++ +K +A TSN T+H V Sbjct: 6 PAVGDSFKSGF--VTLVGRPNAGKSTLINAIMGKK-IAITSNTAQTTRHRFRAV------ 56 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWG-GLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 L + LVD PG K D+ G L L + V L+D V Sbjct: 57 LTREGFQLILVDTPGL------HKPHDALGEELNTSALKALEDVDVVAFLVDASKPVGTG 110 Query: 138 DQDVFSFLDKKAVSYQIVLTKID 160 D+ V + L + +VL+KID Sbjct: 111 DEWVAAQLKRARSKKILVLSKID 133 >gi|194476690|ref|YP_002048869.1| possible GTPase [Paulinella chromatophora] gi|171191697|gb|ACB42659.1| possible GTPase [Paulinella chromatophora] Length = 420 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIA GR VGKSSL+N L+ + + TS A G T+ + + KD+ N + L+D Sbjct: 67 EIATLGRVGVGKSSLLNALLGKSHFP-TSIAHGSTRTQSSILWKDYIKGDN---LVELID 122 Query: 91 MPG 93 PG Sbjct: 123 TPG 125 >gi|164688557|ref|ZP_02212585.1| hypothetical protein CLOBAR_02202 [Clostridium bartlettii DSM 16795] gi|164602970|gb|EDQ96435.1| hypothetical protein CLOBAR_02202 [Clostridium bartlettii DSM 16795] Length = 299 Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G NVGKSSLIN L RK+ +T + PG T+ K + LK NL L+D Sbjct: 136 VMIVGVPNVGKSSLINKLTGRKS-TQTGDRPGVTKG------KQWVRLKGNL---ELLDT 185 Query: 92 PG 93 PG Sbjct: 186 PG 187 >gi|331701406|ref|YP_004398365.1| GTP-binding protein engA [Lactobacillus buchneri NRRL B-30929] gi|329128749|gb|AEB73302.1| GTP-binding protein engA [Lactobacillus buchneri NRRL B-30929] Length = 435 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 17/182 (9%) Query: 26 KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 K +I FS GR NVGKSSL+N ++ + + A ++ + + + Sbjct: 169 KTDNDDIRFSIIGRPNVGKSSLVNAILGEDRVIVSDIAGTTRDAID-------TRFEADG 221 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +VD G +N + + ++R + + +++ G+++ D+ V Sbjct: 222 IKFTMVDTAGIRKRGKVYENTERYS--VMRAMKAIDQSDVILFVMNAEEGIREQDKKVAG 279 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN---YPTAHPEVIPTSSVKRKGIE 200 + + + V+ K D L T T + + LIRN Y + P +I S+V ++ IE Sbjct: 280 YAHEAGKAIITVVNKWDTLKKT--NHTQQDFETLIRNEFQYMSYSP-IIFVSAVTKQRIE 336 Query: 201 VL 202 L Sbjct: 337 KL 338 >gi|320106113|ref|YP_004181703.1| GTP-binding protein Era [Terriglobus saanensis SP1PR4] gi|319924634|gb|ADV81709.1| GTP-binding protein Era [Terriglobus saanensis SP1PR4] Length = 349 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 35/203 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV------PKDFSNLKNNLPA 85 ++ GR N GKS+L+N L+ K +A ++ P T++ V K + Sbjct: 8 VSIVGRPNAGKSTLLNALLGEK-IAIVTHKPQTTRNRILGVLELPIRKKAAKDPGRGAAQ 66 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + LVD PG P ++D ++ + V ++D H + + F Sbjct: 67 VVLVDTPG---VHKPSSHLDK--RMMQEVYDALESRDVVLFIVDATHRLPAESKSDKPFT 121 Query: 146 -DKKAVSYQ-----------------IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 D+KA+S + +VL KID + E L + Y A E Sbjct: 122 RDRKAMSAEEDTFALSLLKNVDSPVLLVLNKIDSVPRA---ELLPLIAHWSEKYNFA--E 176 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 VIP S+ K+ G+EVL A+++ + Sbjct: 177 VIPISAKKKDGLEVLLDAVVKRL 199 >gi|258539617|ref|YP_003174116.1| GTP-binding protein [Lactobacillus rhamnosus Lc 705] gi|257151293|emb|CAR90265.1| GTP-binding protein [Lactobacillus rhamnosus Lc 705] Length = 285 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 10/58 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 G NVGKS+++N LV RKN+A T N PG T++ + D N + L+D PG Sbjct: 127 GIPNVGKSTVLNRLV-RKNIAVTGNKPGVTKNQQWLKASD--NFQ-------LLDTPG 174 >gi|184155102|ref|YP_001843442.1| GTP-binding protein [Lactobacillus fermentum IFO 3956] gi|261266842|sp|B2GBD0|OBG_LACF3 RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|183226446|dbj|BAG26962.1| GTP-binding protein [Lactobacillus fermentum IFO 3956] Length = 435 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 37/190 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK----DFSNLKNNLPAM 86 ++ G +VGKS+L++++ K PK +F+ L NL + Sbjct: 162 DVGLIGFPSVGKSTLLSVVTGAK-------------------PKIAAYEFTTLVPNLGMV 202 Query: 87 ALVDMPGYGYARAPKK-NVDSWG-GLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L D + A P N S G GL +++L R + L+D + ++ + F Sbjct: 203 MLPDGRDFAMADMPGLINGASKGVGLGLQFLRHIERTRVLLHLVDLGNQDAELALEKFHD 262 Query: 145 LDKKAVSY--------QIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSV 194 ++K+ SY QIV+ K+ AQE L++ K L+ T P+V S+V Sbjct: 263 INKELASYDPELLKRPQIVVAT--KMDLPEAQEHLDEFKKLLEADDTLPETPQVFSISAV 320 Query: 195 KRKGIEVLRK 204 G++ L + Sbjct: 321 THAGVQELMQ 330 >gi|188581485|ref|YP_001924930.1| GTP-binding protein Era [Methylobacterium populi BJ001] gi|179344983|gb|ACB80395.1| GTP-binding protein Era [Methylobacterium populi BJ001] Length = 319 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N LV A+ S + Q V + + LVD Sbjct: 29 VALIGVPNAGKSTLLNALVG----AKVSIVSRKVQTTRALV---RGIVMEGDAQVVLVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ +D ++ S + V LLID R G + + L + Sbjct: 82 PGIF---APKRRLDR--AMVHSAWSGAADADAVCLLIDARKGADDEVETILRRLPEVKRP 136 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L KID ++ E + K ++ + S++ G+ LRKA+ Sbjct: 137 KILILNKIDLIARERLLELVAKLNAMV-----PFEDTFLISALNGDGVADLRKAL 186 >gi|156743465|ref|YP_001433594.1| GTP-binding protein EngA [Roseiflexus castenholzii DSM 13941] gi|156234793|gb|ABU59576.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941] Length = 494 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 9/130 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKSSL+N L+ ++ + S+ PG T+ + P + ++ L+D Sbjct: 184 KIAIVGRPNVGKSSLLNRLIGQER-SVVSDIPGTTRD-SIDTPIEIGGVR-----ALLID 236 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + ++R L LLID GV D + + + Sbjct: 237 TAGIRRRGKIDRGLERYS--VMRALRAIERADVALLLIDATEGVTAQDTHIAGMILESLK 294 Query: 151 SYQIVLTKID 160 I++ K D Sbjct: 295 GVAILVNKWD 304 >gi|120404249|ref|YP_954078.1| GTP-binding protein EngA [Mycobacterium vanbaalenii PYR-1] gi|166225829|sp|A1TA72|DER_MYCVP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|119957067|gb|ABM14072.1| small GTP-binding protein [Mycobacterium vanbaalenii PYR-1] Length = 470 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 A PP +A GR NVGKS+L+N ++ R+ A + PG T+ Sbjct: 29 APPPVVAVVGRPNVGKSTLVNRILGRRE-AVVQDVPGVTRD 68 >gi|326692993|ref|ZP_08229998.1| GTPase [Leuconostoc argentinum KCTC 3773] Length = 303 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 17/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N +V K + A + D + + +D Sbjct: 11 VAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQV-------VFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG K +S G +V+ S ++ ++D + D + S L K V Sbjct: 64 PGV------HKPQNSLGDFMVKSAFSALHEADAIWFVVDASMPRGRGDDFIISRL--KEV 115 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + I+K+ TA E L+ + + PT EV P S+ + + L I+E++ Sbjct: 116 KDTPIYLLINKVDLVTADELLDVIQSYQEDAPT-WAEVFPISATEGDNVPELLGNIVESL 174 Query: 211 N 211 Sbjct: 175 E 175 >gi|324111921|gb|EGC05901.1| selenocysteine-specific translation elongation protein [Escherichia fergusonii B253] Length = 615 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPTLTVALTKADRVDEARIGEVERQVKEVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 DAKLFVTAATEGRGIDALREHLLQ 163 >gi|315223305|ref|ZP_07865166.1| ferrous iron transport protein B [Streptococcus anginosus F0211] gi|315187737|gb|EFU21491.1| ferrous iron transport protein B [Streptococcus anginosus F0211] Length = 714 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 30/185 (16%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+A +G N GK+SL NIL N PG T V K + N + + D Sbjct: 3 ELALAGNPNSGKTSLFNILTGSSQ--HVGNWPGVT------VEKKSGLFRKN-KEIIIQD 53 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG Y+ +P Y SE R YLL G+ + D + + Sbjct: 54 LPGI-YSLSP-------------YTSEEMVSRN-YLLSGNADGILDV-VDATNLERNLYL 97 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIR----NYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S Q++ T I + + +EK I +Y P V+ TS++K+ GI+ + + Sbjct: 98 SLQLIETGIPVVLALNMSDVVEKQGKWIDTEKLSYQLGVP-VVATSALKKTGIDQVMQQA 156 Query: 207 LETIN 211 + +N Sbjct: 157 MRVMN 161 >gi|304310580|ref|YP_003810178.1| Small GTP-binding protein Era [gamma proteobacterium HdN1] gi|301796313|emb|CBL44521.1| Small GTP-binding protein Era [gamma proteobacterium HdN1] Length = 305 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 9/63 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 IA GR NVGKS+L+N ++ +K ++ TS P T+H +K + P A+ VD Sbjct: 17 IAIVGRPNVGKSTLLNHILGQK-ISITSRKPQTTRH-------RILGIKTDGPVQAIYVD 68 Query: 91 MPG 93 PG Sbjct: 69 TPG 71 >gi|229552203|ref|ZP_04440928.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1] gi|229314425|gb|EEN80398.1| GTP-binding protein [Lactobacillus rhamnosus LMS2-1] Length = 270 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 10/58 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 G NVGKS+++N LV RKN+A T N PG T++ + D L+D PG Sbjct: 112 GIPNVGKSTVLNRLV-RKNIAVTGNKPGVTKNQQWLKASD---------NFQLLDTPG 159 >gi|83589822|ref|YP_429831.1| GTP-binding protein YlqF [Moorella thermoacetica ATCC 39073] gi|83572736|gb|ABC19288.1| Ras superfamily GTP-binding protein YlqF [Moorella thermoacetica ATCC 39073] Length = 270 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 10/83 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + G NVGKSS++N L R ART N PG T+ + +K+NL L Sbjct: 111 PLRVMALGIPNVGKSSVLNRLAGR-GAARTGNRPGITRGPQWI------RIKDNL---EL 160 Query: 89 VDMPGYGYARAPKKNVDSWGGLI 111 +D PG + R + W G + Sbjct: 161 LDTPGVLWPRWREPRTALWLGAL 183 >gi|15672737|ref|NP_266911.1| GTP-binding protein EngA [Lactococcus lactis subsp. lactis Il1403] gi|26006736|sp|Q9CHH6|DER_LACLA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|12723672|gb|AAK04853.1|AE006309_2 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403] gi|326406306|gb|ADZ63377.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 436 Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 19/152 (12%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + S G T+ + F + ++ ++ Sbjct: 175 IKFSLIGRPNVGKSSLINAILGEDRVI-ASPIAGTTRDA---IDTHFVDSEDQ--EFVMI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +N + + + +RS + V ++I+ G+++ D + F + Sbjct: 229 DTAGMRKSGKIYENTEKYSVMRAMRAIDRSDI--VLMVINAEEGIREYDMRIAGFAHEAG 286 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 IV+ K D TLEK ++N+ Sbjct: 287 KGILIVVNKWD---------TLEKDNDTMKNF 309 >gi|326562235|gb|EGE12563.1| GTP-binding protein Era [Moraxella catarrhalis 7169] gi|326565583|gb|EGE15746.1| GTP-binding protein Era [Moraxella catarrhalis 12P80B1] gi|326567189|gb|EGE17311.1| GTP-binding protein Era [Moraxella catarrhalis BC1] gi|326576293|gb|EGE26208.1| GTP-binding protein Era [Moraxella catarrhalis CO72] Length = 331 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 36/187 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K L+ TS P T+H + L + + VD Sbjct: 34 VAIVGRPNVGKSTLMNHMLGQK-LSITSRKPQTTRHRIHGI------LTDEDRQIVFVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER------STLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG VR ++ER S L V +++ G++ + D+ + Sbjct: 87 PGIHSKE-------------VRAINERMNKAAISALADVDVVLFVVDGIQWREDDLLTLE 133 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL--IRNYPTA--HPEVIPTSSVKRKGIEV 201 A + ++L I+K A +K+K L I ++ + ++IP S+++R ++ Sbjct: 134 KLSATNLPVILV-INK-----ADTVKDKSKLLPVIESFSESFDFADIIPVSALRRHNLDR 187 Query: 202 LRKAILE 208 L+ I E Sbjct: 188 LQSVIGE 194 >gi|317014244|gb|ADU81680.1| GTP-binding protein Der [Helicobacter pylori Gambia94/24] Length = 463 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 203 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 255 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 256 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 312 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y VI TS +K + ++ ++ I+E Sbjct: 313 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----VITTSCLKARHMDEIKHKIIE 367 >gi|311032250|ref|ZP_07710340.1| tRNA modification GTPase TrmE [Bacillus sp. m3-13] Length = 462 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 23/171 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N LV+ +N A ++ PG T+ V +++ +++ +P + LVD G Sbjct: 231 GRPNVGKSSLLNSLVH-ENKAIVTDIPGTTRD----VIEEYVSVR-GVP-LRLVDTAGI- 282 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G R + +++ L + L+++ + D+ +F + K + ++ Sbjct: 283 --RETEDIVERIGVERSREVLKKADL--ILLVLNNNDDLTMEDKQLFEAV--KGMDVIVI 336 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K D PT + + K L H VI TS + +GI+ L +AI Sbjct: 337 VNKTD--LPTKID--IGQVKEL-----ANHHTVISTSLKEEQGIDELEEAI 378 >gi|219856806|ref|YP_002473928.1| hypothetical protein CKR_3463 [Clostridium kluyveri NBRC 12016] gi|219570530|dbj|BAH08514.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 465 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 14/129 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G+ NVGKSSL+N L+ +N A ++ PG T+ V +++ N+ +P + +VD Sbjct: 232 VVIVGKPNVGKSSLLNSLI-EENKAIVTDIPGTTRD----VIEEYMNI-GGIP-IKIVDT 284 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G + + S L V L++D + + D+++ ++++ + Sbjct: 285 AGI---RKTDDIVEKIGVEKSKEKIDESDL--VILMLDSSKELDEEDKEIINYVNHR--K 337 Query: 152 YQIVLTKID 160 Y I+L K D Sbjct: 338 YIILLNKTD 346 >gi|148270008|ref|YP_001244468.1| ferrous iron transport protein B [Thermotoga petrophila RKU-1] gi|147735552|gb|ABQ46892.1| ferrous iron transport protein B [Thermotoga petrophila RKU-1] Length = 667 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 37/186 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT--QHLNFFVPKDFSNLKNNLPAMAL 88 ++A +G NVGK+SL N L K +N PG T + F K ++ + L Sbjct: 16 KVALAGCPNVGKTSLFNALTGTKQ--YVANWPGVTVEKKEGVFTYKGYT--------INL 65 Query: 89 VDMPG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D+PG GY+ +K I R + V L+ D + +Q ++ L Sbjct: 66 IDLPGTYSLGYSSIDEK--------IARDYLLKGDADLVILVADSVNP----EQSLYLLL 113 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP---TSSVKRKGIEVL 202 + + +++L TA + +KT I Y IP TSSV +G+E L Sbjct: 114 EILEMEKKVILA-------MTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEEL 166 Query: 203 RKAILE 208 ++ I+E Sbjct: 167 KEKIVE 172 >gi|117928001|ref|YP_872552.1| GTP-binding protein Era [Acidothermus cellulolyticus 11B] gi|117648464|gb|ABK52566.1| GTP-binding protein Era [Acidothermus cellulolyticus 11B] Length = 297 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 29/173 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKS+L+N +V K +A TS+ P T+H+ V + + +VD PG Sbjct: 14 GRPNVGKSTLLNAMVKTK-VAITSDRPQTTRHVVRGV------VHRPDAQLVVVDTPGLH 66 Query: 96 YARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQI---DQDVFSFLDKKAV 150 R L+ L++ R+TL V +++ C ++I D+ + L++ Sbjct: 67 KPRT----------LLGSRLNDLARATLAEVDVIVFCLPADERIGPGDRFLADELNRIKT 116 Query: 151 SYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 V+TK D++ P A++ L + E++P S+V +E+L Sbjct: 117 PTFAVVTKTDRVRKPRVAEQLLAVAEL------GDWAEIVPVSAVTDYQVELL 163 >gi|33865191|ref|NP_896750.1| GTP-binding protein EngA [Synechococcus sp. WH 8102] gi|41017009|sp|Q7U8G2|DER_SYNPX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|33638875|emb|CAE07172.1| putative GTP-binding protein [Synechococcus sp. WH 8102] Length = 455 Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + + R +P R + D + ++ N P L Sbjct: 177 PIQMAIIGRPNVGKSSLLNAICGEQ---RAIVSPIRGTTRDTI---DTNIVRENRP-WRL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G R+ + +G I R +RS + CV L+ID GV + DQ + ++ Sbjct: 230 VDTAGIRRRRSVNYGPEYFG--INRSFKAIDRSDV-CV-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLS 163 + + +V+ K D + Sbjct: 286 EDGRACVVVVNKWDAVE 302 >gi|251778655|ref|ZP_04821575.1| tRNA modification GTPase TrmE [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082970|gb|EES48860.1| tRNA modification GTPase TrmE [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 456 Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 16/147 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 L+G E G + + G + G+ NVGKSSL+N+L+ K A ++ PG T+ + Sbjct: 212 LLKGADE-GKIIRDGLN-VVIIGKPNVGKSSLLNVLLKEKR-AIVTDIPGTTRD----II 264 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +++ N+ + +P + + D G R + V+ G R E + L + L++D Sbjct: 265 EEYLNI-DGIP-IKITDTAGI---RETEDTVEKIGVERSREKIEEADL--IILILDSSRD 317 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKID 160 +++ D+++ + + K ++ ++L K D Sbjct: 318 LEEEDKEIINTIKDK--NHIVLLNKTD 342 >gi|157128082|ref|XP_001661306.1| septin [Aedes aegypti] gi|108872715|gb|EAT36940.1| septin [Aedes aegypti] Length = 368 Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust. Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 32/184 (17%) Query: 32 IAFSGRSNVGKSSLIN--ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP-AMAL 88 + G S +GKS+LIN L + S RT+ K + + + + Sbjct: 35 LMVCGESGLGKSTLINSLFLTDLYQNRTVSQVEERTEKTTKIDKKTLDIEEKGVKLRLTI 94 Query: 89 VDMPGYGYARAPKKNVDSW------------------GGLIVRYLSERSTLRCVYLLIDC 130 VD PG+G + + DSW GL R + + +Y + Sbjct: 95 VDTPGFGDSINCE---DSWRVCTQYIDEQFRQYFTDESGLNRRNIQDNRVHCLLYFVPPW 151 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ-------ETLEKTKYLIRNYPT 183 HG++Q+D D+ + KK V+ IV+ K D L+ T Q E +E I +P Sbjct: 152 GHGLRQMDIDLMRRMHKK-VNIVIVIGKADTLTTTEVQRLKTRVLEDIESNGLQIYQFPE 210 Query: 184 AHPE 187 + Sbjct: 211 CDSD 214 >gi|67458640|ref|YP_246264.1| GTP-binding protein EngA [Rickettsia felis URRWXCal2] gi|75536894|sp|Q4UMV9|DER_RICFE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|67004173|gb|AAY61099.1| Conserved GTP-binding protein [Rickettsia felis URRWXCal2] Length = 447 Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust. Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 17/183 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I SGR N GKS+ IN L+N + L T G T+ + D+ KNN + L+D Sbjct: 181 QIVVSGRPNAGKSTFINALINDERLL-TGPEAGITRE---SIEIDWQ-YKNN--HIKLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++++ ++ V L+ID +KQ D ++ S + + Sbjct: 234 TAGLRKKSTITESLEKLSA--SDAINSIKFANTVILMIDALAPLKQQDLNIASHVVNEGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPT---SSVKRKGIEVLRKA 205 S IV+ K D + + + E+ Y I T P+V +P S++ ++ IE + A Sbjct: 292 SIVIVVNKWDLVKESEKEAFQEEFYYQIN---THLPQVKGVPVLFISAINKQNIEQVLDA 348 Query: 206 ILE 208 L+ Sbjct: 349 CLK 351 >gi|299536767|ref|ZP_07050075.1| hypothetical protein BFZC1_12128 [Lysinibacillus fusiformis ZC1] gi|298727779|gb|EFI68346.1| hypothetical protein BFZC1_12128 [Lysinibacillus fusiformis ZC1] Length = 291 Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G+ P+A I G NVGKS+LIN L +KN+A+T N PG T+ Sbjct: 115 GMKPRAIRAMIV--GIPNVGKSTLINRLA-KKNIAKTGNTPGVTK 156 >gi|255693537|ref|ZP_05417212.1| ribosome-associated GTPase EngA [Bacteroides finegoldii DSM 17565] gi|260620675|gb|EEX43546.1| ribosome-associated GTPase EngA [Bacteroides finegoldii DSM 17565] Length = 437 Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 21/151 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G + K N D ++R + L++D G++ D ++FS Sbjct: 226 --YLVDTA--GIRKKSKVNEDLEYYSVIRSIRAIEGSDVCILMLDATRGIESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTT--AQETLEK 173 + K +V+ K D + + Q+T E+ Sbjct: 282 IQKNQKGLVVVINKWDLVEDKSVKVQKTFEE 312 >gi|61679425|pdb|1XZP|A Chain A, Structure Of The Gtp-Binding Protein Trme From Thermotoga Maritima gi|61679427|pdb|1XZQ|A Chain A, Structure Of The Gtp-Binding Protein Trme From Thermotoga Maritima Complexed With 5-Formyl-Thf Length = 482 Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 23/172 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKS+L+N L+N ++ A ++ PG T+ V + ++ L +VD G Sbjct: 250 GKPNVGKSTLLNRLLN-EDRAIVTDIPGTTRD----VISEEIVIRGIL--FRIVDTAG-- 300 Query: 96 YARAPKKN-VDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 R+ + V+ G I R L E V ++D + + D+ + + K Y + Sbjct: 301 -VRSETNDLVERLG--IERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNK--RYLV 355 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ K+D + +E I+N ++ S++K +G+E L ++I Sbjct: 356 VINKVDVVEKINEEE--------IKNKLGTDRHMVKISALKGEGLEKLEESI 399 >gi|195119113|ref|XP_002004076.1| GI18253 [Drosophila mojavensis] gi|193914651|gb|EDW13518.1| GI18253 [Drosophila mojavensis] Length = 574 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFVP 73 I G NVGKSSLIN L RK + S PG T+H F VP Sbjct: 337 IGCIGFPNVGKSSLINALKGRK-VVSVSRTPGHTKHFQTIFLVP 379 >gi|169827105|ref|YP_001697263.1| hypothetical protein Bsph_1533 [Lysinibacillus sphaericus C3-41] gi|168991593|gb|ACA39133.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 290 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 G+ P+A I G NVGKS+LIN L +KN+A+T N PG T+ Sbjct: 115 GMKPRAIRAMIV--GIPNVGKSTLINRLA-KKNIAKTGNTPGVTK 156 >gi|15642826|ref|NP_227867.1| iron(II) transport protein B [Thermotoga maritima MSB8] gi|281412111|ref|YP_003346190.1| ferrous iron transport protein B [Thermotoga naphthophila RKU-10] gi|4980537|gb|AAD35145.1|AE001692_2 iron(II) transport protein B [Thermotoga maritima MSB8] gi|281373214|gb|ADA66776.1| ferrous iron transport protein B [Thermotoga naphthophila RKU-10] Length = 669 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 37/186 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT--QHLNFFVPKDFSNLKNNLPAMAL 88 ++A +G NVGK+SL N L K +N PG T + F K ++ + L Sbjct: 18 KVALAGCPNVGKTSLFNALTGTKQ--YVANWPGVTVEKKEGVFTYKGYT--------INL 67 Query: 89 VDMPG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D+PG GY+ +K I R + V L+ D + +Q ++ L Sbjct: 68 IDLPGTYSLGYSSIDEK--------IARDYLLKGDADLVILVADSVNP----EQSLYLLL 115 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP---TSSVKRKGIEVL 202 + + +++L TA + +KT I Y IP TSSV +G+E L Sbjct: 116 EILEMEKKVILA-------MTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEEL 168 Query: 203 RKAILE 208 ++ I+E Sbjct: 169 KEKIVE 174 >gi|68487179|ref|XP_712533.1| hypothetical protein CaO19.10967 [Candida albicans SC5314] gi|68487240|ref|XP_712503.1| hypothetical protein CaO19.3463 [Candida albicans SC5314] gi|46433895|gb|EAK93321.1| hypothetical protein CaO19.3463 [Candida albicans SC5314] gi|46433927|gb|EAK93352.1| hypothetical protein CaO19.10967 [Candida albicans SC5314] Length = 684 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 12/83 (14%) Query: 13 IFLRGVPEIGLLPK--AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 +F+ P+ + P+ +I G NVGKSS IN LV K ++ S+ PG+T+H Sbjct: 337 LFMDSAPKFEVDPEFPDRKLQIGLVGYPNVGKSSTINALVGSKKVS-VSSTPGKTKH--- 392 Query: 71 FVPKDFSNLKNNLPAMALVDMPG 93 F S P + L D PG Sbjct: 393 FQTIHLS------PDVLLCDCPG 409 >gi|330686012|gb|EGG97635.1| ribosome biogenesis GTPase Der [Staphylococcus epidermidis VCU121] Length = 436 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 9/128 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ V ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEERVI-VSNVAGTTRDA---VDTEYSYDGQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS + V ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERSNV--VLVVIDAEQGIIEQDKRVAGYAHEEGKAIVIV 292 Query: 156 LTKIDKLS 163 + K D + Sbjct: 293 VNKWDTVE 300 >gi|187932414|ref|YP_001887734.1| tRNA modification GTPase TrmE [Clostridium botulinum B str. Eklund 17B] gi|187720567|gb|ACD21788.1| tRNA modification GTPase TrmE [Clostridium botulinum B str. Eklund 17B] Length = 456 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 16/147 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 L+G E G + + G + G+ NVGKSSL+N+L+ K A ++ PG T+ + Sbjct: 212 LLKGADE-GKIIRDGLN-VVIIGKPNVGKSSLLNVLLKEKR-AIVTDVPGTTRD----II 264 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +++ N+ + +P + + D G R + V+ G R E + L + L++D Sbjct: 265 EEYLNI-DGIP-IKITDTAGI---RETEDTVEKIGVERSREKIEEADL--IILILDSSRE 317 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKID 160 +++ D+++ + + K ++ ++L K D Sbjct: 318 LEEEDKEIINTIKDK--NHIVLLNKTD 342 >gi|17232312|ref|NP_488860.1| hypothetical protein all4820 [Nostoc sp. PCC 7120] gi|17133957|dbj|BAB76519.1| all4820 [Nostoc sp. PCC 7120] Length = 628 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 23/141 (16%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-FVPKDFSNLKNNLPAMA 87 P I +GR+ GKSSLIN + + NLA P + N+ + +D L Sbjct: 287 PVNILLAGRTGAGKSSLINTIF-QSNLAEVDVLPSTAEIQNYHWQTQDGETLN------- 338 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D PGY + DS ++ Y ++ L V ++D + DV + Sbjct: 339 LLDTPGYEQVKRGDLR-DS----VLEYATKADLLLLVTPVLD-----PALQMDVDFLQEI 388 Query: 148 KAVSYQI----VLTKIDKLSP 164 KA I V+T++D+L P Sbjct: 389 KATVADIPAIAVVTQVDRLRP 409 >gi|302345898|ref|YP_003814251.1| ribosome-associated GTPase EngA [Prevotella melaninogenica ATCC 25845] gi|302149910|gb|ADK96172.1| ribosome-associated GTPase EngA [Prevotella melaninogenica ATCC 25845] Length = 437 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 25/199 (12%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLN 69 L+ VPE + P A GR N GKSS+IN + +A T+ T++ Sbjct: 163 LKDVPEEAV--DQDIPRFAVVGRPNAGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYTK 220 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F DF LVD G ++++ + ++R + L++D Sbjct: 221 FGF--DFY----------LVDTAGIRRKNKVSEDLEFYS--VMRSIRSIENSDVCILMLD 266 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT---AHP 186 G++ D ++F + + S +V+ K D L Q+ ++ + IR P Sbjct: 267 ATRGIEAQDMNIFQLIQRNNKSLVVVVNKWD-LVEDKNQKVIDTFENAIRKRMAPFVDFP 325 Query: 187 EVIPTSSVKRKGIEVLRKA 205 + ++ K++ +VL A Sbjct: 326 IIFASALTKQRIFKVLETA 344 >gi|238883140|gb|EEQ46778.1| conserved hypothetical protein [Candida albicans WO-1] Length = 685 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 12/83 (14%) Query: 13 IFLRGVPEIGLLPK--AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 +F+ P+ + P+ +I G NVGKSS IN LV K ++ S+ PG+T+H Sbjct: 338 LFMDSAPKFEVDPEFPDRKLQIGLVGYPNVGKSSTINALVGSKKVS-VSSTPGKTKH--- 393 Query: 71 FVPKDFSNLKNNLPAMALVDMPG 93 F S P + L D PG Sbjct: 394 FQTIHLS------PDVLLCDCPG 410 >gi|89098663|ref|ZP_01171545.1| GTPase family protein [Bacillus sp. NRRL B-14911] gi|89086625|gb|EAR65744.1| GTPase family protein [Bacillus sp. NRRL B-14911] Length = 281 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 10/58 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 G NVGKS+LIN L +KN+A+T N PG T+ + M L+D PG Sbjct: 118 GIPNVGKSTLINRLA-KKNIAKTGNMPGVTKAQQWI---------KAGKEMELLDTPG 165 >gi|150019907|ref|YP_001312161.1| tRNA modification GTPase TrmE [Clostridium beijerinckii NCIMB 8052] gi|189036196|sp|A6M3M5|MNME_CLOB8 RecName: Full=tRNA modification GTPase mnmE gi|149906372|gb|ABR37205.1| tRNA modification GTPase TrmE [Clostridium beijerinckii NCIMB 8052] Length = 462 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 25/175 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G+ NVGKSSL+N L+ R+N A ++ PG T+ + +++ NL + +P + + D Sbjct: 230 IVIVGKPNVGKSSLLNALL-RENRAIVTDVPGTTRD----IIEEYINL-DGIP-VKITDT 282 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + V+ G + E + L + L++D + + D + + + K Sbjct: 283 AGI---RDTEDVVEKIGVEKSKEKIEEADL--IILMLDASRYIDEEDSRIINKI--KNRK 335 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 Y ++L K+D L QE +++N +I S+ +GI++L+ + Sbjct: 336 YIVLLNKMD-LKDIKIQEE------ILKNLSN----IINISAKTGQGIDILKDEV 379 >gi|327400365|ref|YP_004341204.1| translation initiation factor aIF-2 [Archaeoglobus veneficus SNP6] gi|327315873|gb|AEA46489.1| translation initiation factor aIF-2 [Archaeoglobus veneficus SNP6] Length = 588 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 24/142 (16%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF---------VPKDFSNLK 80 P ++ G + GK++L++ + R+ A G TQH+ + KD N+K Sbjct: 7 PIVSVLGHVDHGKTTLLDKI--RRTRVTAKEAGGITQHIGATEIPIDLIKQICKDIWNVK 64 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +P + +D PG+ N+ GG + L++D G K ++ Sbjct: 65 VTIPGLLFIDTPGH----KAFTNLRRRGGALA---------DLAILIVDVNEGFKPQTEE 111 Query: 141 VFSFLDKKAVSYQIVLTKIDKL 162 S L + + KID++ Sbjct: 112 AVSILRTFKTPFVVAANKIDRI 133 >gi|293413027|ref|ZP_06655695.1| selenocysteine-specific translation elongation factor [Escherichia coli B354] gi|291468674|gb|EFF11167.1| selenocysteine-specific translation elongation factor [Escherichia coli B354] Length = 614 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKGVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|281491251|ref|YP_003353231.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147] gi|281374992|gb|ADA64510.1| GTP-binding protein [Lactococcus lactis subsp. lactis KF147] Length = 436 Score = 35.0 bits (79), Expect = 6.7, Method: Compositional matrix adjust. Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 19/152 (12%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + S G T+ + F + ++ ++ Sbjct: 175 IKFSLIGRPNVGKSSLINAILGEDRVI-ASPIAGTTRDA---IDTHFVDSEDQ--EFVMI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +N + + + +RS + V ++I+ G+++ D + F + Sbjct: 229 DTAGMRKSGKIYENTEKYSVMRAMRAIDRSDI--VLMVINAEEGIREYDMRIAGFAHEAG 286 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 IV+ K D TLEK ++N+ Sbjct: 287 KGILIVVNKWD---------TLEKDNDTMKNF 309 >gi|187732429|ref|YP_001882283.1| selenocysteinyl-tRNA-specific translation factor [Shigella boydii CDC 3083-94] gi|187429421|gb|ACD08695.1| selenocysteine-specific translation elongation factor [Shigella boydii CDC 3083-94] Length = 614 Score = 35.0 bits (79), Expect = 6.8, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSY-QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++ C GV ++ + L + LTK D++ E + K ++R Y A Sbjct: 80 LVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKDVLREYGFA 139 Query: 185 HPEVIPTSSVKRKGIEVLRKAILE 208 ++ T++ + +GI+ LR+ +L+ Sbjct: 140 EAKLFITAATEGRGIDALREHLLQ 163 >gi|297794363|ref|XP_002865066.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] gi|297310901|gb|EFH41325.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] Length = 427 Score = 35.0 bits (79), Expect = 6.9, Method: Compositional matrix adjust. Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 26/187 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G NVGKS+L N ++ +K ++ ++ P T+H L ++ M L Sbjct: 132 VAVLGMPNVGKSTLSNQMIGQK-ISIVTDKPQTTRHRILGICSSPEYQ--------MILY 182 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLID-CRHG--VKQIDQDVFSFL 145 D PG +K + ++++ + + + CV +L+D C+ ++++ ++ L Sbjct: 183 DTPG-----VIEKKMHRLDTMMMKNVRDAAINADCVVILVDACKTPTYIEEVLKEGLGNL 237 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +KK +V+ K D + P + LE + T EVIP S+ GIE +++ Sbjct: 238 EKKP-PMLLVMNKKDLIKPGEIAKKLEWYEKF-----TDVDEVIPVSAKYGHGIEDVKEW 291 Query: 206 ILETINY 212 IL + + Sbjct: 292 ILSKLPF 298 >gi|153956503|ref|YP_001397268.1| tRNA modification GTPase TrmE [Clostridium kluyveri DSM 555] gi|189036197|sp|A5N451|MNME_CLOK5 RecName: Full=tRNA modification GTPase mnmE gi|146349361|gb|EDK35897.1| TrmE [Clostridium kluyveri DSM 555] Length = 459 Score = 35.0 bits (79), Expect = 6.9, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 14/129 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G+ NVGKSSL+N L+ +N A ++ PG T+ V +++ N+ +P + +VD Sbjct: 226 VVIVGKPNVGKSSLLNSLI-EENKAIVTDIPGTTRD----VIEEYMNI-GGIP-IKIVDT 278 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R V+ G + + S L V L++D + + D+++ ++++ + Sbjct: 279 AGI---RKTDDIVEKIGVEKSKEKIDESDL--VILMLDSSKELDEEDKEIINYVNHR--K 331 Query: 152 YQIVLTKID 160 Y I+L K D Sbjct: 332 YIILLNKTD 340 >gi|219670950|ref|YP_002461385.1| tRNA modification GTPase TrmE [Desulfitobacterium hafniense DCB-2] gi|219541210|gb|ACL22949.1| tRNA modification GTPase TrmE [Desulfitobacterium hafniense DCB-2] Length = 459 Score = 35.0 bits (79), Expect = 6.9, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 21/171 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL+N L+ + A ++ PG T+ ++ + L + LVD G Sbjct: 226 GQPNVGKSSLLNALMGEER-AIVTDIPGTTRD----EIRESVTIGGIL--LQLVDTAGL- 277 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G I R + L+I +K + + + D+ + ++ Sbjct: 278 --RESEDLVEKLG--IERSWKAMEKAELILLIIQAGQELKAEELKILNQYDQSVI---VL 330 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K+D L E+ + ++ NYPT IP S + G + L K I Sbjct: 331 INKMDLLVGK------EQGEEVLENYPTQQGVWIPFSVKENLGFKQLEKEI 375 >gi|332523593|ref|ZP_08399845.1| ribosome biogenesis GTPase Der [Streptococcus porcinus str. Jelinkova 176] gi|332314857|gb|EGJ27842.1| ribosome biogenesis GTPase Der [Streptococcus porcinus str. Jelinkova 176] Length = 436 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 10/134 (7%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + S G T+ D S ++ ++ Sbjct: 175 IRFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRD-----AIDTSFTDSDGQEFTMI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +N + + + +RS + V ++I+ G+++ D+ + F + Sbjct: 229 DTAGMRKSGKIYENTEKYSVMRAMRAIDRSDV--VLMVINAEEGIREYDKRIAGFAHEAG 286 Query: 150 VSYQIVLTKIDKLS 163 IV+ K D ++ Sbjct: 287 KGMIIVVNKWDTIA 300 >gi|226323780|ref|ZP_03799298.1| hypothetical protein COPCOM_01555 [Coprococcus comes ATCC 27758] gi|225207964|gb|EEG90318.1| hypothetical protein COPCOM_01555 [Coprococcus comes ATCC 27758] Length = 298 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 7/67 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ + + L + + VD Sbjct: 10 VTLIGRPNVGKSTLMNYLIGQK-IAITSNKPQTTRN------RIQTVLTTDEGQIVFVDT 62 Query: 92 PGYGYAR 98 PG A+ Sbjct: 63 PGIHKAK 69 >gi|188590674|ref|YP_001922717.1| tRNA modification GTPase TrmE [Clostridium botulinum E3 str. Alaska E43] gi|188500955|gb|ACD54091.1| tRNA modification GTPase TrmE [Clostridium botulinum E3 str. Alaska E43] Length = 456 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 16/147 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 L+G E G + + G + G+ NVGKSSL+N+L+ K A ++ PG T+ + Sbjct: 212 LLKGADE-GKIIRDGLN-VVIIGKPNVGKSSLLNVLLKEKR-AIVTDIPGTTRD----II 264 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +++ N+ + +P + + D G R + V+ G R E + L + L++D Sbjct: 265 EEYLNI-DGIP-IKITDTAGI---RETEDTVEKIGVERSREKIEEADL--IILILDSSRD 317 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKID 160 +++ D+++ + + K ++ ++L K D Sbjct: 318 LEEEDKEIINTIKDK--NHIVLLNKTD 342 >gi|157964906|ref|YP_001499730.1| tRNA modification GTPase TrmE [Rickettsia massiliae MTU5] gi|166991114|sp|A8F2P7|MNME_RICM5 RecName: Full=tRNA modification GTPase mnmE gi|157844682|gb|ABV85183.1| tRNA modification GTPase TrmE [Rickettsia massiliae MTU5] Length = 445 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 32/171 (18%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +HTI + +L + G L ++G ++A G NVGKSSL+N L+ R ++A SN Sbjct: 191 THTILVNTISEYLNDNRK-GELLRSGL-KLAIIGPPNVGKSSLLNFLMQR-DIAIVSNIA 247 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGY--------GYARAPKKNVDSWGGLIVRY 114 G T+ + ++ +L D+ GY G ++ G I R Sbjct: 248 GTTRDI----------IEGHL------DIGGYPIILQDTAGIGEESSDIIEQEG--IKRA 289 Query: 115 LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 ++ T ++ D I++D+ + +D+ ++ ++ KID + + Sbjct: 290 INSAKTADIKIIMFDAEKLDSSINEDIINLIDENTIT---IINKIDLIEAS 337 >gi|93005198|ref|YP_579635.1| GTP-binding protein Era [Psychrobacter cryohalolentis K5] gi|92392876|gb|ABE74151.1| GTP-binding protein Era [Psychrobacter cryohalolentis K5] Length = 338 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 7/62 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + L N+ VD Sbjct: 41 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHRIHGI------LSNDEMQAVFVDT 93 Query: 92 PG 93 PG Sbjct: 94 PG 95 >gi|238798221|ref|ZP_04641707.1| Predicted GTPase [Yersinia mollaretii ATCC 43969] gi|238717958|gb|EEQ09788.1| Predicted GTPase [Yersinia mollaretii ATCC 43969] Length = 294 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 17/147 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I G++ GKSSL N + ++ L+ TSN T+ F L M ++ Sbjct: 37 PVIGIMGKTGAGKSSLCNAIFSQP-LSPTSNVHACTRKAKSF------RLSIGSRQMTII 89 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+PG G + K + L ++L + L + +I +DQ + + Sbjct: 90 DLPGVGESSDRDKE---YQDLYEQWLPK---LDLIIWVIKADDRALSVDQHFYQNVICAV 143 Query: 150 VSYQ----IVLTKIDKLSPTTAQETLE 172 YQ VL ++DK+ P ++++ Sbjct: 144 PEYQDKVVFVLNQVDKIEPCREWDSIQ 170 >gi|320159635|ref|YP_004172859.1| translation initiation factor IF-2 [Anaerolinea thermophila UNI-1] gi|319993488|dbj|BAJ62259.1| translation initiation factor IF-2 [Anaerolinea thermophila UNI-1] Length = 593 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 27/199 (13%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 I L PE L+P+ PP + G + GK++L++ + N N+A A G TQH+ + Sbjct: 86 IILSEKPE-SLIPR--PPVVTILGHVDHGKTTLLDAIRN-TNVAE-GEAGGITQHIGAYQ 140 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + L + +D PG+ A + +++ L++ Sbjct: 141 VEHKGRL------ITFLDTPGHAAFTAMRARGAQGADIVI-------------LVVAAND 181 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDK--LSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 GV ++ + V + L KID+ +P + L + L+ + + V+P Sbjct: 182 GVMPQTREAIAHARAARVPIVVALNKIDRPDANPDFVKRQLAELD-LVPDEWGGNTLVVP 240 Query: 191 TSSVKRKGIEVLRKAILET 209 S+ +R G+E L +AIL T Sbjct: 241 VSAKQRIGLEDLMEAILLT 259 >gi|290769994|gb|ADD61761.1| putative protein [uncultured organism] Length = 322 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F GR NVGKS+L+N ++ +K +A TSN P T++ V D + VD Sbjct: 28 VTFIGRPNVGKSTLMNQIIGQK-IAITSNKPQTTRNRIQTVYTDERG------QIVFVDT 80 Query: 92 PGYGYAR 98 PG A+ Sbjct: 81 PGIHKAK 87 >gi|167749645|ref|ZP_02421772.1| hypothetical protein EUBSIR_00603 [Eubacterium siraeum DSM 15702] gi|167657398|gb|EDS01528.1| hypothetical protein EUBSIR_00603 [Eubacterium siraeum DSM 15702] Length = 400 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 27/144 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR N GKSSLIN + ++ LA S+ G T V K L L + + D Sbjct: 14 IGIFGRRNAGKSSLINAITGQE-LAVVSDTAGTTTD---PVSKAMELLP--LGPVMITDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY------LLIDCRHGVKQIDQDVFSFL 145 PG +D G L L R + + ++ L++D G+ D + L Sbjct: 68 PG----------LDDEGDL--GSLRVRKSYQVLFKTDIALLVVDSTKGISDFDSAILERL 115 Query: 146 DKKAVSYQIVLTK---IDKLSPTT 166 K+ + Y IV+ K +D + P T Sbjct: 116 KKQNIPYIIVMNKCGLLDTVPPKT 139 >gi|88658308|ref|YP_507292.1| GTP-binding protein Era [Ehrlichia chaffeensis str. Arkansas] gi|123493487|sp|Q2GGZ1|ERA_EHRCR RecName: Full=GTPase Era gi|88599765|gb|ABD45234.1| GTP-binding protein Era [Ehrlichia chaffeensis str. Arkansas] Length = 296 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 16/142 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G +N GKS+LIN+LV +K A T ++ + L N + +D P Sbjct: 12 AIVGTTNAGKSTLINMLVGQKVAAVTPKVQTTRVRMH-------AVLNNENVQLIFIDTP 64 Query: 93 GYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +PK ++ + IV+ ++S + + V LL+D ++ + + + + S + + + Sbjct: 65 GIF---SPKTKLEKF---IVKHAWMSLKG-IENVILLLDVKNYLNKHIEKIISRIKQSNI 117 Query: 151 SYQIVLTKIDKLSPTTAQETLE 172 + +V+ KID + ++ + +E Sbjct: 118 NAILVVNKIDTVPTSSVDKAIE 139 >gi|241896284|ref|ZP_04783580.1| GTP-binding protein EngA [Weissella paramesenteroides ATCC 33313] gi|241870525|gb|EER74276.1| GTP-binding protein EngA [Weissella paramesenteroides ATCC 33313] Length = 436 Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust. Identities = 34/163 (20%), Positives = 71/163 (43%), Gaps = 17/163 (10%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PEI + +F GR NVGKSSL+N ++ + + S+ G T+ + F++ Sbjct: 164 PEIEAQEEDDAVRFSFIGRPNVGKSSLVNAILGEERVI-VSDISGTTRDA---IDTRFTS 219 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + +VD G ++ + + ++R + V ++++ G+++ D Sbjct: 220 AYGD--EFVMVDTAGIRKRGKVYESTEKYS--VMRAMRAIDDSNVVLVVLNAEEGIREQD 275 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V + + + IV+ K D TLEK + + ++ Sbjct: 276 KHVAGYAHEAGRAVIIVVNKWD---------TLEKDNHTMADF 309 >gi|258515338|ref|YP_003191560.1| GTP-binding protein EngA [Desulfotomaculum acetoxidans DSM 771] gi|257779043|gb|ACV62937.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771] Length = 443 Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 9/130 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKSSL+N ++ ++ + SN PG T+ P + + L+D Sbjct: 180 KIAVIGRPNVGKSSLVNSILGQERVI-VSNVPGTTRD-AIDTP-----FERDDKHYVLID 232 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + + + ++R L +++D GV D+ + + +K Sbjct: 233 TA--GIRRKSRIYISTEKYSVLRSLKAIDRSDVALIVLDAEEGVTDQDKRIAGYAHEKGK 290 Query: 151 SYQIVLTKID 160 + I++ K D Sbjct: 291 ASIIIINKWD 300 >gi|229595362|ref|XP_001017994.2| hypothetical protein TTHERM_01045810 [Tetrahymena thermophila] gi|225566277|gb|EAR97749.2| hypothetical protein TTHERM_01045810 [Tetrahymena thermophila SB210] Length = 1192 Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 50/122 (40%), Gaps = 15/122 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTS-NAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 I G S VGKSSLI L K L S N+ R + P ++N++ N +D Sbjct: 284 IILIGESQVGKSSLIEQLTKYKGLVGDSINSKSRFCEI---FPVIYNNVRYN-----FID 335 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL-----IDCRHGVKQIDQDVFSFL 145 PGYG + +D++ I +L L L I CR QI + F+ Sbjct: 336 TPGYGGTDSRSSYLDNFKQ-IADFLRRNKILEFKILFVRNAEIQCRDNTDQIVKQFLLFI 394 Query: 146 DK 147 + Sbjct: 395 SE 396 >gi|167758361|ref|ZP_02430488.1| hypothetical protein CLOSCI_00701 [Clostridium scindens ATCC 35704] gi|167664258|gb|EDS08388.1| hypothetical protein CLOSCI_00701 [Clostridium scindens ATCC 35704] Length = 442 Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust. Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 18/152 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSS+IN L+ + + + A ++ +++ N +D Sbjct: 180 IAIVGKPNVGKSSIINKLLGEQRVIVSDIAGTTRDAID-------TDIVYNGKEYVFIDT 232 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 233 AGLRRKNKIKEELERYS--IIRTVTAVERADVVLIVIDATEGVTEQDAKIAGIAHERGKG 290 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 IV+ K D +EK +R Y + Sbjct: 291 IIIVVNKWD---------AIEKNDKTMREYDS 313 >gi|160882378|ref|ZP_02063381.1| hypothetical protein BACOVA_00327 [Bacteroides ovatus ATCC 8483] gi|237719052|ref|ZP_04549533.1| GTP-binding protein EngA [Bacteroides sp. 2_2_4] gi|260172013|ref|ZP_05758425.1| GTP-binding protein EngA [Bacteroides sp. D2] gi|299148136|ref|ZP_07041198.1| ribosome-associated GTPase EngA [Bacteroides sp. 3_1_23] gi|315920326|ref|ZP_07916566.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156112191|gb|EDO13936.1| hypothetical protein BACOVA_00327 [Bacteroides ovatus ATCC 8483] gi|229451431|gb|EEO57222.1| GTP-binding protein EngA [Bacteroides sp. 2_2_4] gi|298512897|gb|EFI36784.1| ribosome-associated GTPase EngA [Bacteroides sp. 3_1_23] gi|313694201|gb|EFS31036.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 437 Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 19/136 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEERNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + +VR + L++D GV+ D ++FS Sbjct: 226 --YLVDTAGIRKKNKVNEDLEYYS--VVRSIRSIEGSDVCILMLDATRGVEGQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKID 160 + K +V+ K D Sbjct: 282 IQKNQKGLVVVINKWD 297 >gi|149374708|ref|ZP_01892482.1| GTP-binding protein Era [Marinobacter algicola DG893] gi|149361411|gb|EDM49861.1| GTP-binding protein Era [Marinobacter algicola DG893] Length = 305 Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K L+ TS P T+H +K P A+ VD Sbjct: 17 VAIVGRPNVGKSTLLNHILGQK-LSITSRKPQTTRH-------QVLGIKTEGPVQAIYVD 68 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST----LRCVYLLIDCRHGVKQIDQDVFSFLD 146 PG + P+ I RY+++ +T V + + + D+ V L Sbjct: 69 TPGM-HEEEPRA--------INRYMNKAATSALKDVDVAVFVVDQMAWTTADEMVLEKLS 119 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D++ A L L R A E+IP S++K +E L A+ Sbjct: 120 SLKCPVILAVNKVDRIENREA--LLPHLDMLSRKREFA--EIIPLSALKGMNLEPLESAV 175 >gi|84105269|ref|NP_001033585.1| eukaryotic translation initiation factor 5B [Gallus gallus] Length = 1220 Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 37/166 (22%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VP-----------KDFS 77 P I G + GK+ +++ L R + S A G TQ + VP K+F Sbjct: 632 PVICVLGHVDTGKTKILDKL--RHTHVQDSEAGGITQQIGATNVPLEAINEQTKMVKNFD 689 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVK 135 +P M ++D PG+ +S+ L R + C L++D HG++ Sbjct: 690 RENIKIPGMLIIDTPGH----------ESFSNL-----RNRGSSLCDIAILVVDIMHGLE 734 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKL-----SP-TTAQETLEKTK 175 + + L K + + L KID+L SP T TL+K K Sbjct: 735 PQTIESINLLKSKKCPFIVALNKIDRLYDWKKSPDTDVAVTLKKQK 780 >gi|55820417|ref|YP_138859.1| GTP-binding protein EngA [Streptococcus thermophilus LMG 18311] gi|55822299|ref|YP_140740.1| GTP-binding protein EngA [Streptococcus thermophilus CNRZ1066] gi|81820353|sp|Q5M1D9|DER_STRT1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|81820516|sp|Q5M5X5|DER_STRT2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|55736402|gb|AAV60044.1| phosphoglycerate dehydrogenase-related protein [Streptococcus thermophilus LMG 18311] gi|55738284|gb|AAV61925.1| GTP-binding protein, putative [Streptococcus thermophilus CNRZ1066] Length = 436 Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 14/148 (9%) Query: 21 IGLLP----KAGPPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +G LP + P I FS GR NVGKSSLIN ++ + S G T+ + Sbjct: 160 VGNLPTEVEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVI-ASPIAGTTRDA---IDT 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 +F + + ++D G + +N + + I+R + V ++I+ G+ Sbjct: 216 NFVDSEGQ--EYTMIDTAGMRKSGKVYENTEKYS--IMRSMRAIDRSDVVLMVINAEEGI 271 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 ++ D+ + F + IV+ K D + Sbjct: 272 REYDKRIAGFAHEAGKGIIIVVNKWDTI 299 >gi|294012485|ref|YP_003545945.1| GTP-binding protein EngA [Sphingobium japonicum UT26S] gi|292675815|dbj|BAI97333.1| GTP-binding protein EngA [Sphingobium japonicum UT26S] Length = 456 Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 16/190 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ P ++A GR N GKS+LIN L+ L T G T+ + V +++ N Sbjct: 181 ESAPLKLAIVGRPNAGKSTLINRLLGENRLL-TGPEAGITRD-SIAVDWQWTDPDGNERP 238 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVR-YLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + L+D G R K D L V L+ + V LL+D G++ D + Sbjct: 239 VRLIDTAGM---RKRAKVQDKLEKLAVSDGLNAVNFAEVVVLLLDSTRGLEAQDLRIADK 295 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + ++ + + L K D + +A ++ L IR P ++ S+ KG+ Sbjct: 296 VIEEGRALVVALNKWDTVENGSALYQGIKQALSDGLAQIRGVP-----IMTVSAATGKGL 350 Query: 200 EVLRKAILET 209 + L + ET Sbjct: 351 DDLIRVAFET 360 >gi|296128460|ref|YP_003635710.1| ferrous iron transport protein B [Cellulomonas flavigena DSM 20109] gi|296020275|gb|ADG73511.1| ferrous iron transport protein B [Cellulomonas flavigena DSM 20109] Length = 640 Score = 35.0 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + G NVGKS+L N L + R NAPG T L + + + LV Sbjct: 17 PLVVLVGNPNVGKSTLFNALTGGRQ--RVVNAPGTTVELQ---TGTWRLRDDGTSHVRLV 71 Query: 90 DMPG-YG-YARAPKKNVDS 106 D+PG Y AR+P + V + Sbjct: 72 DLPGTYSLLARSPDEQVTA 90 >gi|254478618|ref|ZP_05091991.1| putative GTPase [Carboxydibrachium pacificum DSM 12653] gi|214035472|gb|EEB76173.1| putative GTPase [Carboxydibrachium pacificum DSM 12653] Length = 403 Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 74/186 (39%), Gaps = 21/186 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ IA G+ N GKSSLIN + N+ +A S PG T + K L L Sbjct: 5 PRSERLHIAIFGKRNAGKSSLINAITNQP-IAIVSPTPGTTTDPVY---KSMEILP--LG 58 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD G +V G L V E + +L+ ++ + Sbjct: 59 PVVLVDTAGI-------DDVGELGKLRVEKTLEVLNRTDIAILVVSEIDDLNFEKQLIEL 111 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +K V VL KID ++ EK YL T + +P S KGIE L+ Sbjct: 112 FREKKVPSIGVLNKID-----LDKDYKEKLSYL---QSTLGIKFLPVSCATLKGIEELKN 163 Query: 205 AILETI 210 I ++ Sbjct: 164 EIARSV 169 >gi|328705370|ref|XP_003242776.1| PREDICTED: protein peanut-like isoform 2 [Acyrthosiphon pisum] gi|328705374|ref|XP_003242778.1| PREDICTED: protein peanut-like isoform 4 [Acyrthosiphon pisum] Length = 471 Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 26/155 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN---NLPAMALVDMP 92 GRS +GKS+LIN + + P V + LK NL ++ +VD P Sbjct: 74 GRSGLGKSTLINTMFLADIYGKEHPGPSLRVGKTVRVETNRCMLKEKGVNL-SLTVVDTP 132 Query: 93 GYGYARAPKKNVDSWGGLI-------VRYLSERSTLR-----------CVYLLIDCRHGV 134 G+G A N D W ++ YL+ S + C+Y L HG+ Sbjct: 133 GFGDA---VDNSDCWQPVLEYIESRYEEYLNAESRVNRKVQHDSRVHCCLYFLESNSHGM 189 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 +D + L K V+ +++K D ++P E Sbjct: 190 TPLDVEFMQRLHDK-VNIIPIISKADTMTPDEVTE 223 >gi|329116373|ref|ZP_08245090.1| ribosome biogenesis GTPase Der [Streptococcus parauberis NCFD 2020] gi|326906778|gb|EGE53692.1| ribosome biogenesis GTPase Der [Streptococcus parauberis NCFD 2020] Length = 436 Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 10/134 (7%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + S G T+ D S + ++ Sbjct: 175 IRFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRD-----AIDTSFKDEDGQEFTMI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +N + + + +RS + V ++I+ G+++ D+ + F + Sbjct: 229 DTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVINAEEGIREYDKRIAGFAHEAG 286 Query: 150 VSYQIVLTKIDKLS 163 IV+ K D L Sbjct: 287 KGMIIVVNKWDTLE 300 >gi|326931159|ref|XP_003211701.1| PREDICTED: septin-4-like [Meleagris gallopavo] Length = 344 Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 68/174 (39%), Gaps = 31/174 (17%) Query: 32 IAFSGRSNVGKSSLINILV------NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +G S +GKS+L+N L +RK L + V + +K L Sbjct: 53 LMVAGESGLGKSTLVNSLFLTDMYRDRKLLNAEERITQTVEITKHVVDIEEKGVKLRL-- 110 Query: 86 MALVDMPGYGYARAPKKNVDSW------------------GGLIVRYLSERSTLRCVYLL 127 +VD PG+G A N + W GL + + + C+Y + Sbjct: 111 -TIVDTPGFGDA---VNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCIYFI 166 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 HG++ +D + L ++ V+ VL K D L+P + K + I +Y Sbjct: 167 SPFGHGLRPLDVEFMRALHQR-VNIVPVLAKADTLTPAEVERMKNKIREEIDHY 219 >gi|225551742|ref|ZP_03772685.1| GTP-binding protein [Borrelia sp. SV1] gi|225371537|gb|EEH00964.1| GTP-binding protein [Borrelia sp. SV1] Length = 279 Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 13/149 (8%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G NVGKSS+IN+L +K+ A+ +N PG T+++ + N L DMPG Sbjct: 124 GVPNVGKSSIINLLSGKKS-AKVANKPGYTKNIQIVKINEEIN---------LFDMPGIL 173 Query: 96 YARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 + +++ ++ +E ST +YLL K I + +K ++ Sbjct: 174 WHNLADQSIAKKLAILDMIKNEIVDSTDLALYLLEIMDQNNKNILLKKYEIYNKNSLDIL 233 Query: 154 IVLTKIDKLSPTTAQETLEK-TKYLIRNY 181 K KL + LEK +K LI+ + Sbjct: 234 QNFAKARKLIGKKNELNLEKASKILIKEF 262 >gi|199599537|ref|ZP_03212925.1| Predicted GTPase [Lactobacillus rhamnosus HN001] gi|258508403|ref|YP_003171154.1| GTP-binding protein [Lactobacillus rhamnosus GG] gi|199589578|gb|EDY97696.1| Predicted GTPase [Lactobacillus rhamnosus HN001] gi|257148330|emb|CAR87303.1| GTP-binding protein [Lactobacillus rhamnosus GG] gi|259649718|dbj|BAI41880.1| putative GTPase [Lactobacillus rhamnosus GG] Length = 285 Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 10/58 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 G NVGKS+++N LV RKN+A T N PG T++ + D N + L+D PG Sbjct: 127 GIPNVGKSTVLNRLV-RKNIAVTGNKPGVTKNQQWLKASD--NFQ-------LLDTPG 174 >gi|120555159|ref|YP_959510.1| GTP-binding protein Era [Marinobacter aquaeolei VT8] gi|189037652|sp|A1U2V4|ERA_MARAV RecName: Full=GTPase Era gi|120325008|gb|ABM19323.1| GTP-binding protein Era [Marinobacter aquaeolei VT8] Length = 305 Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 9/63 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K L+ TS P T+H +K P A+ VD Sbjct: 17 VAIVGRPNVGKSTLLNHILGQK-LSITSRKPQTTRH-------QVLGIKTEGPVQAIYVD 68 Query: 91 MPG 93 PG Sbjct: 69 TPG 71 >gi|313904194|ref|ZP_07837573.1| ribosome-associated GTPase EngA [Eubacterium cellulosolvens 6] gi|313470996|gb|EFR66319.1| ribosome-associated GTPase EngA [Eubacterium cellulosolvens 6] Length = 443 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA G+ NVGKSS+IN L+ N S+ G T+ V +K N + Sbjct: 178 PKIAIVGKPNVGKSSIINKLLG-TNRVIVSDIAGTTRDAIDTV------IKRNGKDYTFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + IVR ++ ++ID G+ + D + + Sbjct: 231 DTAGLRRKSKIKEELERYS--IVRTVAAVERCDIAVVVIDAVEGITEQDAKIAGIAHDRG 288 Query: 150 VSYQIVLTKIDKLS 163 I + K D + Sbjct: 289 KGLIIAVNKWDAIE 302 >gi|238917282|ref|YP_002930799.1| GTP-binding protein Era [Eubacterium eligens ATCC 27750] gi|238872642|gb|ACR72352.1| GTP-binding protein Era [Eubacterium eligens ATCC 27750] Length = 322 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F GR NVGKS+L+N ++ +K +A TSN P T++ V D + VD Sbjct: 28 VTFIGRPNVGKSTLMNQIIGQK-IAITSNKPQTTRNRIQTVYTDERG------QIVFVDT 80 Query: 92 PGYGYAR 98 PG A+ Sbjct: 81 PGIHKAK 87 >gi|167747191|ref|ZP_02419318.1| hypothetical protein ANACAC_01905 [Anaerostipes caccae DSM 14662] gi|317473608|ref|ZP_07932897.1| ribosome-associated GTPase EngA [Anaerostipes sp. 3_2_56FAA] gi|167654151|gb|EDR98280.1| hypothetical protein ANACAC_01905 [Anaerostipes caccae DSM 14662] gi|316898898|gb|EFV20923.1| ribosome-associated GTPase EngA [Anaerostipes sp. 3_2_56FAA] Length = 440 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 9/131 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA G+ N GKSS+IN ++ + + S+ G T+ V ++ N + Sbjct: 178 PKIAIIGKPNAGKSSIINKMLGEERVI-VSDVAGTTRDAIDTV------IQKNGKEYVFI 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K++++ + ++R +S L+ID G+ + D + ++ Sbjct: 231 DTAGLRRKNKIKEDLERYS--VIRTVSAVERCDVAVLVIDATEGITEQDAKIAGIAHERG 288 Query: 150 VSYQIVLTKID 160 I + K D Sbjct: 289 KGMIIAVNKWD 299 >gi|72390776|ref|XP_845682.1| GTP-binding protein [Trypanosoma brucei TREU927] gi|62176824|gb|AAX70922.1| GTP-binding protein, putative [Trypanosoma brucei] gi|70802218|gb|AAZ12123.1| GTP-binding protein, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 682 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 9/65 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G NVGKSSL+N + K ++ +S A G T+HL +P N+ L+D Sbjct: 478 IGFVGHPNVGKSSLLNCIRGTKVVSVSSTA-GHTKHLQ-TIPIPSENV-------VLIDS 528 Query: 92 PGYGY 96 PG + Sbjct: 529 PGLAF 533 >gi|306834169|ref|ZP_07467289.1| ribosome-associated GTPase EngA [Streptococcus bovis ATCC 700338] gi|304423742|gb|EFM26888.1| ribosome-associated GTPase EngA [Streptococcus bovis ATCC 700338] Length = 436 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 10/137 (7%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + + S G T+ + +F++ ++ Sbjct: 172 PDIIKFSLIGRPNVGKSSLINAILGEERVI-ASPIAGTTRDA---IDTNFTD--SDGQEY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++I+ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRSMRAIDRSDIVLMVINAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLS 163 + IV+ K D + Sbjct: 284 EAGKGIIIVVNKWDTIE 300 >gi|251771600|gb|EES52176.1| GTP-binding protein (EngA) [Leptospirillum ferrodiazotrophum] Length = 468 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 P IA GR NVGKS+LIN L+ + L TS PG T+ Sbjct: 207 PARIAVIGRPNVGKSTLINHLLGEERLV-TSPLPGTTR 243 >gi|157960272|ref|YP_001500306.1| selenocysteine-specific translation elongation factor [Shewanella pealeana ATCC 700345] gi|157845272|gb|ABV85771.1| selenocysteine-specific translation elongation factor [Shewanella pealeana ATCC 700345] Length = 635 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 + SG + GK+SLI L P Q + + F +L + +A VD Sbjct: 3 VVTSGHVDHGKTSLIQALTGTD----ADRLPEEKQRGMTIELGYAFMDLSDG-ERLAFVD 57 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PG+ I L+ S + L+I C GV + + L + Sbjct: 58 VPGHSK-------------FINTMLAGVSCAKHALLIIACDDGVMPQTYEHLAILQLLNL 104 Query: 151 SYQIV-LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + IV LTK DK+ T E E+ L+ + P + S+ GI+ L+ AI E Sbjct: 105 EHLIVVLTKQDKVDATRVDEVKEQVSELLAQHQRQSP-IFVVSAQSGFGIDALKLAITE 162 >gi|120437318|ref|YP_863004.1| GTP-binding protein Era [Gramella forsetii KT0803] gi|117579468|emb|CAL67937.1| GTP-binding protein Era [Gramella forsetii KT0803] Length = 295 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 22/162 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAP-GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGY 94 G NVGKS+L+N + + TS A R + L +DF M L D PG Sbjct: 12 GNPNVGKSTLMNAFIGERLSIITSKAQTTRHRILGIVNGEDFQ--------MILSDTPG- 62 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 P + + V+ E + + +Y++ G+K D+ F+ + V + Sbjct: 63 --IIKPAYELQASMMDFVKSAFEDADV-LIYIVEIGEEGLK--DEAFFNKISNSEVPVLL 117 Query: 155 VLTKIDKLSPTTAQETL-EKTKYLIRNYPTAHPEVIPTSSVK 195 +L KIDK + QE L E+ +Y PTA E+ P S+++ Sbjct: 118 LLNKIDK----SNQEQLEEQVQYWAEKVPTA--EIHPISALE 153 >gi|118404254|ref|NP_001072441.1| guanine nucleotide binding protein-like 1 [Xenopus (Silurana) tropicalis] gi|111306272|gb|AAI21692.1| guanine nucleotide binding protein-like 1 [Xenopus (Silurana) tropicalis] Length = 612 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 39/93 (41%), Gaps = 16/93 (17%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 +VSH I G P L K G I G NVGKSSLIN LV +K + S Sbjct: 339 VVSHQITDAEL-----GAPSSELY-KDGVLSIGCVGFPNVGKSSLINGLVGKK-IVSVSR 391 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 PG T++ + P + L D PG Sbjct: 392 TPGHTKYFQTYY---------LTPTVRLCDCPG 415 >gi|104783262|ref|YP_609760.1| GTP-binding protein Era [Pseudomonas entomophila L48] gi|122402119|sp|Q1I5V9|ERA_PSEE4 RecName: Full=GTPase Era gi|95112249|emb|CAK16976.1| GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase [Pseudomonas entomophila L48] Length = 300 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 26/180 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL-VD 90 +A GR NVGKS+L+N ++ +K LA TS P T+H + +K A+ VD Sbjct: 12 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRH-------NMLGIKTEGDVQAIYVD 63 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG A N RY++ ++ L+ V ++I + D+D + Sbjct: 64 TPGMHKANDKALN---------RYMNRNASAALKDVDVVIFVVDRTRWTDEDQLVLERVQ 114 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V+ +++ K D++ E + ++L P A EV+P S+ + ++ L I Sbjct: 115 YVTGPLIIAVNKTDRMEEKA--ELIPHLQWLQEQLPNA--EVMPISAQQGHNLDALEAQI 170 >gi|269866639|ref|XP_002652342.1| GTPase, predicted [Enterocytozoon bieneusi H348] gi|220062702|gb|EED41715.1| GTPase, predicted [Enterocytozoon bieneusi H348] Length = 158 Score = 35.0 bits (79), Expect = 7.4, Method: Compositional matrix adjust. Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 I F G N+GKSSLINIL N K + + + PG T+ Sbjct: 6 IGFVGYPNIGKSSLINILKN-KQVCKVAPIPGETK 39 >gi|188527319|ref|YP_001910006.1| GTP-binding protein EngA [Helicobacter pylori Shi470] gi|238691915|sp|B2USZ4|DER_HELPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|188143559|gb|ACD47976.1| GTP-binding protein EngA [Helicobacter pylori Shi470] Length = 461 Score = 35.0 bits (79), Expect = 7.4, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 201 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 253 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 254 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 310 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y +I TS +K I+ ++ I+E Sbjct: 311 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----IITTSCLKTHHIDEIKHKIIE 365 >gi|51473927|ref|YP_067684.1| tRNA modification GTPase TrmE [Rickettsia typhi str. Wilmington] gi|81389958|sp|Q68VZ0|MNME_RICTY RecName: Full=tRNA modification GTPase mnmE gi|51460239|gb|AAU04202.1| thiophene and furan oxidation protein; tRNA modification GTPase [Rickettsia typhi str. Wilmington] Length = 445 Score = 35.0 bits (79), Expect = 7.4, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 28/142 (19%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G N GKSSL+N L+ R N+A SN G T+ + +D Sbjct: 217 KLAIIGPPNTGKSSLLNFLMQR-NIAIVSNIAGTTRDI----------------IEGHLD 259 Query: 91 MPGY-------GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + GY RA ++ G I R ++ T ++ D I+ D+ Sbjct: 260 IGGYPIILQDTAGIRAESTDIIEREG-IKRAINSAKTANIKIIMFDAEKLDLSINNDIID 318 Query: 144 FLDKKAVSYQIVLTKIDKLSPT 165 +D+ + +++ KID + P+ Sbjct: 319 LIDENTI---VIINKIDLIEPS 337 >gi|331090933|ref|ZP_08339775.1| hypothetical protein HMPREF9477_00418 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405155|gb|EGG84691.1| hypothetical protein HMPREF9477_00418 [Lachnospiraceae bacterium 2_1_46FAA] Length = 821 Score = 35.0 bits (79), Expect = 7.5, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 22/182 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP + G + GK+SL++ + N + R A G TQH+ +V +N+ N + Sbjct: 324 PPVVCVMGHVDHGKTSLLDAIRNTNVIDR--EAGGITQHIGAYV----ANV--NGERITF 375 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D PG+ A +R +ST L++ GV + S Sbjct: 376 LDTPGHEAFTA------------MRLRGAQST-DIAILVVAADDGVMPQTVEAISHAKAA 422 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKY-LIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + KIDK S + E T+Y LI +P S+ +G+E L + IL Sbjct: 423 GIEIIVAVNKIDKPSANIERVKQELTEYELIPEDWGGSTIFVPVSAKTGEGLEDLMEMIL 482 Query: 208 ET 209 T Sbjct: 483 LT 484 >gi|311267723|ref|XP_003131707.1| PREDICTED: septin-4-like [Sus scrofa] Length = 462 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 31/205 (15%) Query: 32 IAFSGRSNVGKSSLINILV------NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +G S +GKS+LIN L +RK L+ + V + +K L Sbjct: 146 LMVAGESGLGKSTLINSLFLTDLYRDRKLLSAEERIMQTVEITKHAVDIEEKGVKLRL-- 203 Query: 86 MALVDMPGYGYARAPKKNVDSW------------------GGLIVRYLSERSTLRCVYLL 127 +VD PG+G A N + W GL + + + C+Y + Sbjct: 204 -TIVDTPGFGDA---VNNTECWKPVAEYIDQQFEQYFRDESGLNRKNIQDNRVHCCLYFI 259 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 HG++ +D + L ++ V+ +L K D L+P + K + I ++ + Sbjct: 260 SPFGHGLRPLDVEFMKALHQR-VNIVPILAKADTLTPPEVERKKRKIREEIEHFGIKVYQ 318 Query: 188 VIPTSSVKRKGIEVLRKAILETINY 212 S + + ++ +A+ E+I + Sbjct: 319 FPDCDSDEDEDFKLQDQALKESIPF 343 >gi|291549419|emb|CBL25681.1| iron-only hydrogenase maturation protein HydF [Ruminococcus torques L2-14] Length = 423 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 22/179 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G+ N GKSS++N V ++LA S+ G T + K L L + ++D Sbjct: 24 IGFFGKRNAGKSSVMNA-VTGQDLAVVSDVKGTTTDPVY---KTMELLP--LGPVVMMDT 77 Query: 92 PGYGYARAPKKNVDSWGGL----IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 PG +D G L + + + ++ID GV + D + + K Sbjct: 78 PG----------IDDEGELGELRVKKSYQVLNKTDIAVVVIDGTCGVGEEDLKITERIQK 127 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + Y IVL K ++ T E L + T +++ S+ + GI L++ + Sbjct: 128 KNIPYIIVLNKCERF--TQEDERLRVQENTASYLKTEKEKILLVSAADKSGIYELKEEL 184 >gi|157165129|ref|YP_001466229.1| GTP-binding protein EngA [Campylobacter concisus 13826] gi|166224319|sp|A7ZBS1|DER_CAMC1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|112801522|gb|EAT98866.1| GTP-binding protein EngA [Campylobacter concisus 13826] Length = 462 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 13/125 (10%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 G+ NVGKSSL N L R+ +A TS+ G T+ N + ++ L+D G Sbjct: 8 GKPNVGKSSLFNRLA-RRRIAITSDVSGTTRDTN------KAKIEVEGKECILIDSGGLD 60 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 + KNV + + L+E + ++D + D+ +F L K + +V Sbjct: 61 DSSELFKNVKA------KTLAEAKNSDVILYMVDGKMMPDDEDRAIFYELSKLNLPIALV 114 Query: 156 LTKID 160 + KID Sbjct: 115 INKID 119 >gi|56751667|ref|YP_172368.1| GTP-binding protein HflX [Synechococcus elongatus PCC 6301] gi|56686626|dbj|BAD79848.1| GTP-binding protein HflX [Synechococcus elongatus PCC 6301] Length = 535 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 28/190 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P IA G +N GKS+L+NIL + L T + R LN +N + Sbjct: 363 PSIAIVGYTNAGKSTLLNILTQAEVYAADQLFATLDPTTRRLVLN-------ANPGSEPD 415 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV--KQIDQDVF 142 + L D G+ + P VD++ L E + + L+D H QI Q V Sbjct: 416 VVLLTDTVGFIH-ELPPPLVDAFRA----TLEEVTEADALLHLVDLSHPAWYAQI-QSVM 469 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 S L + V+ +L +K+ T+ ETL + +P+ + S+ + G+E L Sbjct: 470 SILREMPVTPGPILLAFNKIDAATS-ETLAIAQ-------AEYPQAVFLSASRGLGLETL 521 Query: 203 RKAILETINY 212 R+ + + ++Y Sbjct: 522 RQRLGQLVHY 531 >gi|320458666|dbj|BAJ69287.1| ferrous iron transport protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 671 Score = 35.0 bits (79), Expect = 7.5, Method: Composition-based stats. Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 A + F G NVGKSS+ N L+ + RT NAPG T Sbjct: 16 ASMKRVVFVGNPNVGKSSMFNALLGAR--TRTMNAPGTT 52 >gi|291546834|emb|CBL19942.1| GTP-binding protein Era [Ruminococcus sp. SR1/5] Length = 302 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 21/183 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TSN P T++ K + + + +D Sbjct: 10 VAIIGRPNVGKSTLMNHLIGQK-IAITSNKPQTTRN------KIQTVYTCDEGQIVFLDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + G +V+ ++ER+ + + L++ V ++ + L K Sbjct: 63 PGIHKAK------NKLGEYMVQ-VAERTLKEVDAIMWLVEPSTFVGAGERHIAEQLQKVG 115 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +++ KID + ++ + + E+IP S+++ K + + +I + Sbjct: 116 VPVILIINKIDTVKKEELLPAIDTYRKI-----CDFAEIIPCSALRGKNTQDIIPSIFKY 170 Query: 210 INY 212 + Y Sbjct: 171 LPY 173 >gi|282880854|ref|ZP_06289547.1| ribosome-associated GTPase EngA [Prevotella timonensis CRIS 5C-B1] gi|281305236|gb|EFA97303.1| ribosome-associated GTPase EngA [Prevotella timonensis CRIS 5C-B1] Length = 437 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 19/136 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR NVGKSS+IN + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNVGKSSIINAFIGEDRNIVTEIAGTTRDSIYTRYDKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + + + E S + C+ L++D G++ D ++F Sbjct: 226 --YLVDTAGIRRKNKVTEDLEFYSVMRSIHSIENSDV-CI-LMLDATRGIESQDMNIFQL 281 Query: 145 LDKKAVSYQIVLTKID 160 + + S +V+ K D Sbjct: 282 IQRNNKSLVVVVNKWD 297 >gi|261329089|emb|CBH12068.1| GTP-binding protein, putative [Trypanosoma brucei gambiense DAL972] Length = 682 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 9/65 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G NVGKSSL+N + K ++ +S A G T+HL +P N+ L+D Sbjct: 478 IGFVGHPNVGKSSLLNCIRGTKVVSVSSTA-GHTKHLQ-TIPIPSENV-------VLIDS 528 Query: 92 PGYGY 96 PG + Sbjct: 529 PGLAF 533 >gi|224498350|ref|ZP_03666699.1| tRNA modification GTPase TrmE [Listeria monocytogenes Finland 1988] Length = 457 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ + A ++ G T+ + +++ N++ +P + L+D Sbjct: 223 AIIGRPNVGKSSLLNQLIQEEK-AIVTDIAGTTRD----IIEEYVNVR-GVP-LRLIDTA 275 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S ++ ++L+ + +D F +Y Sbjct: 276 GI---RETEDIVEKIG--VER--SRKALADADFILLVLNQNEELTAEDEALFEAAAGHNY 328 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +VL K D + +EK + + P ++ TS V +G+E L +AI Sbjct: 329 VVVLNKTDLETKL----DIEKVREIAGENP-----IVATSLVNDEGLEALEEAI 373 >gi|195580491|ref|XP_002080069.1| GD24278 [Drosophila simulans] gi|194192078|gb|EDX05654.1| GD24278 [Drosophila simulans] Length = 575 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN L RK + S PG T+H F+ P + L D Sbjct: 335 IGCVGFPNVGKSSLINALKGRK-VVSVSRTPGHTKHFQTIFL----------TPLVRLCD 383 Query: 91 MPG 93 PG Sbjct: 384 CPG 386 >gi|195351921|ref|XP_002042464.1| GM23366 [Drosophila sechellia] gi|194124333|gb|EDW46376.1| GM23366 [Drosophila sechellia] Length = 575 Score = 35.0 bits (79), Expect = 7.5, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN L RK + S PG T+H F+ P + L D Sbjct: 335 IGCVGFPNVGKSSLINALKGRK-VVSVSRTPGHTKHFQTIFL----------TPLVRLCD 383 Query: 91 MPG 93 PG Sbjct: 384 CPG 386 >gi|262280930|ref|ZP_06058713.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262257830|gb|EEY76565.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 469 Score = 35.0 bits (79), Expect = 7.6, Method: Compositional matrix adjust. Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 9/138 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 KA +A GR NVGKS+L+N L+ + + PG T+ + ++P + + Sbjct: 173 KATGLRLAIIGRPNVGKSTLVNRLLGEDRVV-AFDQPGTTRD-SIYIP-----FERDGRQ 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + IV+ L + +++D R GV + D + + Sbjct: 226 YTLIDTAGVRRKGKVDEMIEKFS--IVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLS 163 + + I + K D ++ Sbjct: 284 LEAGRAMVIAINKWDNMT 301 >gi|256545124|ref|ZP_05472490.1| ribosome-associated GTPase EngA [Anaerococcus vaginalis ATCC 51170] gi|256399165|gb|EEU12776.1| ribosome-associated GTPase EngA [Anaerococcus vaginalis ATCC 51170] Length = 442 Score = 35.0 bits (79), Expect = 7.6, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 13/150 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 IA G+ N GKSSL+N L+N + + T A ++ ++ KD NN L+D Sbjct: 182 IAIIGKPNAGKSSLVNHLLNEERMIVTDIAGTTRDAIDTYWQYKD-----NN---YVLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G N++ + R + LID GV + D + + + Sbjct: 234 TAGLRRKNKVSDNIEYYANQ--RTFDAVDSSEICLFLIDATVGVTEQDTKIAGYAHNQKK 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + I + K DK+ T T++ + IRN Sbjct: 292 AIIIAVNKWDKVEKET--NTMKNMEKEIRN 319 >gi|255323406|ref|ZP_05364537.1| ribosome-associated GTPase EngA [Campylobacter showae RM3277] gi|255299443|gb|EET78729.1| ribosome-associated GTPase EngA [Campylobacter showae RM3277] Length = 467 Score = 35.0 bits (79), Expect = 7.6, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 13/129 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G+ NVGKSSL N L R+ +A TS+ G T+ N + + + + L+D Sbjct: 4 IILVGKPNVGKSSLFNRLAGRR-IAITSDVSGTTRDTNKTIIEIYDR------SCVLIDS 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + KNV + + L+E + + ++D + D+ ++ L K + Sbjct: 57 GGLDDSSELFKNVKA------KTLAEARSSDAIIFMVDGKMMPSDEDKALYYALLKLNLP 110 Query: 152 YQIVLTKID 160 +V+ KID Sbjct: 111 TALVINKID 119 >gi|332799158|ref|YP_004460657.1| ribosome biogenesis GTP-binding protein YlqF [Tepidanaerobacter sp. Re1] gi|332696893|gb|AEE91350.1| ribosome biogenesis GTP-binding protein YlqF [Tepidanaerobacter sp. Re1] Length = 285 Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 10/58 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 G NVGKSSLIN + RK+ ART++ PG T++ K + + +NL L+D PG Sbjct: 118 GIPNVGKSSLINQMAGRKS-ARTADIPGVTRN------KMWLKVDDNLE---LLDTPG 165 >gi|310780551|ref|YP_003968883.1| GTP-binding proten HflX [Ilyobacter polytropus DSM 2926] gi|309749874|gb|ADO84535.1| GTP-binding proten HflX [Ilyobacter polytropus DSM 2926] Length = 441 Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 21/186 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS---NLKNNLPAM 86 P +A G +N GKS+++N L+ + + + + F F L++NL + Sbjct: 209 PTVALVGYTNAGKSTIMNHLMQMEE-EEDTRTKSFVKDMLFATLDPFHRKIKLEDNLEFI 267 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI--DCRHGVKQIDQDVFSF 144 L+D G+ ++ P V+S+ + + E S L V + D +H +K + ++V Sbjct: 268 -LIDTVGF-VSKLPHDLVESFKSTL-EEVEEASLLLYVVDISREDYKHQLK-VTRNVVEE 323 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L+ K + +V KIDKLS E LEKT + + S+++ KGI L K Sbjct: 324 LNVKDTPFLVVYNKIDKLSS----EELEKTGDIFEKS-------VYISAIEGKGIGELLK 372 Query: 205 AILETI 210 I + I Sbjct: 373 EIEKEI 378 >gi|269866221|ref|XP_002652197.1| GTPase, predicted [Enterocytozoon bieneusi H348] gi|220062974|gb|EED41859.1| GTPase, predicted [Enterocytozoon bieneusi H348] Length = 155 Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust. Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 I F G N+GKSSLINIL N K + + + PG T+ Sbjct: 3 IGFVGYPNIGKSSLINILKN-KQVCKVAPIPGETK 36 >gi|213403632|ref|XP_002172588.1| nucleolar GTP-binding protein [Schizosaccharomyces japonicus yFS275] gi|212000635|gb|EEB06295.1| nucleolar GTP-binding protein [Schizosaccharomyces japonicus yFS275] Length = 605 Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G NVGKSS IN L K ++ S+ PG+T+H F +K + P + L D Sbjct: 281 IGLVGYPNVGKSSTINALAGAKKVS-VSSTPGKTKH--------FQTIKLS-PTVMLCDC 330 Query: 92 PG 93 PG Sbjct: 331 PG 332 >gi|167854943|ref|ZP_02477718.1| GTP-binding protein Era [Haemophilus parasuis 29755] gi|219870403|ref|YP_002474778.1| GTP-binding protein Era [Haemophilus parasuis SH0165] gi|254783657|sp|B8F3C8|ERA_HAEPS RecName: Full=GTPase Era gi|167853900|gb|EDS25139.1| GTP-binding protein Era [Haemophilus parasuis 29755] gi|219690607|gb|ACL31830.1| GTP-binding protein Era binding 16S rRNA and 30S ribosome [Haemophilus parasuis SH0165] Length = 300 Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS T+H + + + + VD Sbjct: 11 IAIVGRPNVGKSTLLNKILGQK-ISITSRKAQTTRHRILGIKTEGAYQE------IYVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD--VFSFLDKKA 149 PG K+ ++ L+ R + S + V ++I G K D D V + L Sbjct: 64 PGLHI--EEKRAINR---LMNRAAA--SAIGDVDMVIFVVEGTKWTDDDEMVLNKLRSTK 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D + +E L L + +P E+IP S+ + K + +L K + E+ Sbjct: 117 APVILAINKVDNIKE--KEELLPHLTALSQKFP--FKEIIPISAQRGKNVHILEKFVRES 172 Query: 210 I 210 + Sbjct: 173 L 173 >gi|332362231|gb|EGJ40031.1| ribosome-associated GTPase EngA [Streptococcus sanguinis SK1056] Length = 436 Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 10/137 (7%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + F++ + Sbjct: 172 PDMIKFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTVFTDSEGQ--EF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + + +RS + V ++++ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYSVMRAMRAIDRSDV--VLMVLNAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTKIDKLS 163 + IV+ K D L Sbjct: 284 EAGKGIVIVVNKWDTLD 300 >gi|239947026|ref|ZP_04698779.1| ribosome-associated GTPase EngA [Rickettsia endosymbiont of Ixodes scapularis] gi|239921302|gb|EER21326.1| ribosome-associated GTPase EngA [Rickettsia endosymbiont of Ixodes scapularis] Length = 447 Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 29/189 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +I SGR N GKS+ IN L+N + L T G T+ + D+ KNN + L+D Sbjct: 181 QIVVSGRPNAGKSTFINALINDERLL-TGPEAGITRE---SIEIDWQ-YKNN--HIKLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTL------RCVYLLIDCRHGVKQIDQDVFSF 144 G ++++ LS T+ V L+ID +KQ D ++ S Sbjct: 234 TAGLRKKSTITESLEK--------LSASDTINSIKFANTVILMIDALVPLKQQDLNIASH 285 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPT---SSVKRKGI 199 + + S IV+ K D + + + E+ Y I T P+V +P S++ ++ I Sbjct: 286 VVNEGRSIVIVVNKWDLVKESEKEAFQEEFYYQIN---THLPQVKGVPVLFISAINKQNI 342 Query: 200 EVLRKAILE 208 E + A L+ Sbjct: 343 EQVLDACLK 351 >gi|239636852|ref|ZP_04677851.1| ribosome-associated GTPase EngA [Staphylococcus warneri L37603] gi|239597526|gb|EEQ80024.1| ribosome-associated GTPase EngA [Staphylococcus warneri L37603] Length = 436 Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 9/128 (7%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N ++ + + SN G T+ V ++S + L+D G Sbjct: 182 GRPNVGKSSLVNAILGEERVI-VSNVAGTTRDA---VDTEYSFDGQDY---VLIDTAGMR 234 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 ++ + + L ERS + V ++ID G+ + D+ V + ++ + IV Sbjct: 235 KKGKVYESTEKYSVLRALKAIERSNV--VLVVIDAEQGIIEQDKRVAGYAHEEGKAIVIV 292 Query: 156 LTKIDKLS 163 + K D + Sbjct: 293 VNKWDTVE 300 >gi|193212091|ref|YP_001998044.1| GTP-binding protein EngA [Chlorobaculum parvum NCIB 8327] gi|238692612|sp|B3QLF4|DER_CHLP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|193085568|gb|ACF10844.1| small GTP-binding protein [Chlorobaculum parvum NCIB 8327] Length = 438 Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 13/132 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N L+ + S+ PG T+ V LK N L+D Sbjct: 180 KLAVLGRPNVGKSSLVNALLG-TDRQIVSDVPGTTRDAIDSV------LKRNGKEYILID 232 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDKK 148 G ++ + L +ER+ RC +L+D + G++ D + ++ Sbjct: 233 TAGLRKRTKIDPGIEYYSSL----RTERAIERCQVALVLLDAQLGLESQDMKIIHMAIER 288 Query: 149 AVSYQIVLTKID 160 I++ K D Sbjct: 289 KKGVLILVNKWD 300 >gi|302818624|ref|XP_002990985.1| hypothetical protein SELMODRAFT_132651 [Selaginella moellendorffii] gi|300141316|gb|EFJ08029.1| hypothetical protein SELMODRAFT_132651 [Selaginella moellendorffii] Length = 276 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 12/72 (16%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 GLLP++ +A G N+GKSS+IN L+ RK + + PG T+ L + D Sbjct: 111 GLLPRS--VRVAVVGFPNIGKSSIINRLLKRK-ICEAAPRPGVTRQLRWSTIHD------ 161 Query: 82 NLPAMALVDMPG 93 + L+D PG Sbjct: 162 ---GLDLLDSPG 170 >gi|19703615|ref|NP_603177.1| GTP-binding protein Era [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|25008422|sp|Q8RGM1|ERA_FUSNN RecName: Full=GTPase Era gi|19713721|gb|AAL94476.1| GTP-binding protein era [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 296 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN LV+ K +A S+ G T+ N K N K+N +D Sbjct: 6 IAVVGRPNVGKSTLINKLVSEK-VAIVSDKAGTTRD-NI---KGILNFKDN--QYIFIDT 58 Query: 92 PG 93 PG Sbjct: 59 PG 60 >gi|120598182|ref|YP_962756.1| GTP-binding protein EngA [Shewanella sp. W3-18-1] gi|166225859|sp|A1RHQ7|DER_SHESW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120558275|gb|ABM24202.1| small GTP-binding protein [Shewanella sp. W3-18-1] Length = 488 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 59/135 (43%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRD-SIYIP-----MEREGREYVI 250 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +++ L V L+ID R GV + D + F Sbjct: 251 IDTAGVRRRSKVHQVIEKFS--VIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFALNA 308 Query: 149 AVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 309 GRALVIAVNKWDGID 323 >gi|308063376|gb|ADO05263.1| GTP-binding protein EngA [Helicobacter pylori Sat464] Length = 460 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 15/179 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL+N L +K + S+ G T P D + L + + VD Sbjct: 200 QVGIIGRVNVGKSSLLNALT-KKERSLVSSVAGTT-----IDPIDETILIGD-QKICFVD 252 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + R ++ + + E+S + L++D ++D+ + S DK ++ Sbjct: 253 TAGIRH-RGKILGIEKYALERTQKALEKSHI--ALLVLDVSAPFVELDEKISSLADKHSL 309 Query: 151 SYQIVLTKID-KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + +P K K+ Y +I TS +K I+ ++ I+E Sbjct: 310 GIILILNKWDIRYAPYEEIMATLKRKFRFLEYAP----IITTSCLKAHHIDEIKHKIIE 364 >gi|302802247|ref|XP_002982879.1| hypothetical protein SELMODRAFT_117255 [Selaginella moellendorffii] gi|300149469|gb|EFJ16124.1| hypothetical protein SELMODRAFT_117255 [Selaginella moellendorffii] Length = 276 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 12/72 (16%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 GLLP++ +A G N+GKSS+IN L+ RK + + PG T+ L + D Sbjct: 111 GLLPRS--VRVAVVGFPNIGKSSIINRLLKRK-ICEAAPRPGVTRQLRWSTIHD------ 161 Query: 82 NLPAMALVDMPG 93 + L+D PG Sbjct: 162 ---GLDLLDSPG 170 >gi|224476594|ref|YP_002634200.1| GTP-binding protein EngA [Staphylococcus carnosus subsp. carnosus TM300] gi|254783167|sp|B9DNV9|DER_STACT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|222421201|emb|CAL28015.1| putative GTP-binding protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 436 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 11/150 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +++ GR NVGKSSL+N ++ + SN G T+ + ++S + L+D Sbjct: 177 KLSLIGRPNVGKSSLVNAILGEDRVI-VSNIAGTTRDA---IDTEYSYEDQDY---VLID 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + + L ERS + V +++D G+ + D+ V + ++ Sbjct: 230 TAGMRKKGKVYESTEKYSVLRALKAIERSNV--VLVVLDAEEGIIEQDKRVAGYAHEEGK 287 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + IV+ K D L + +T++K + IR Sbjct: 288 AVVIVVNKWDTLDKDS--KTMKKFEDKIRQ 315 >gi|269862373|ref|XP_002650812.1| GTPase, predicted [Enterocytozoon bieneusi H348] gi|269863467|ref|XP_002651233.1| GTPase, predicted [Enterocytozoon bieneusi H348] gi|220064905|gb|EED42823.1| GTPase, predicted [Enterocytozoon bieneusi H348] gi|220065579|gb|EED43245.1| GTPase, predicted [Enterocytozoon bieneusi H348] Length = 270 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G N+GKSSLINIL N K + + + PG T+ + + + L+D Sbjct: 118 IGFVGYPNIGKSSLINILKN-KQVCKVAPIPGETKVWQYITL---------MKDVYLIDS 167 Query: 92 PG 93 PG Sbjct: 168 PG 169 >gi|34541718|ref|NP_906197.1| GTP-binding protein EngA [Porphyromonas gingivalis W83] gi|188994055|ref|YP_001928307.1| GTP-binding protein EngA [Porphyromonas gingivalis ATCC 33277] gi|41017000|sp|Q7MT48|DER_PORGI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|34398036|gb|AAQ67096.1| GTP-binding protein, Era/ThdF family [Porphyromonas gingivalis W83] gi|188593735|dbj|BAG32710.1| GTP-binding protein EngA [Porphyromonas gingivalis ATCC 33277] Length = 437 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 35/164 (21%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQH----LNFFVPKDFSNLK 80 P IA GR N GKSSL+N + ++A T+ T++ LNF+ Sbjct: 177 PRIAIVGRPNAGKSSLLNAFIGEDRHIVTDIAGTTRDSIYTKYNKFGLNFY--------- 227 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVD G + K N D ++R + L++D GV+ D + Sbjct: 228 -------LVDTA--GIRKRGKVNEDLEYYSVIRSIRAIENSDVCVLMLDATRGVESQDLN 278 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +F + + + + + K D + +K++ +I+ + A Sbjct: 279 IFQIIQRNSKGLVVCINKWDLVE--------DKSQAVIKTFENA 314 >gi|13540832|ref|NP_110520.1| GTPase [Thermoplasma volcanium GSS1] gi|14324215|dbj|BAB59143.1| GTP1/OBG family GTP-binding protein [Thermoplasma volcanium GSS1] Length = 360 Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust. Identities = 15/28 (53%), Positives = 20/28 (71%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVN 51 +PK+G +A G NVGKSSL+N+L N Sbjct: 55 IPKSGDATVALVGFPNVGKSSLLNVLTN 82 >gi|255037604|ref|YP_003088225.1| GTP-binding protein Era [Dyadobacter fermentans DSM 18053] gi|254950360|gb|ACT95060.1| GTP-binding protein Era [Dyadobacter fermentans DSM 18053] Length = 308 Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 17/177 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP-AMALVD 90 ++ G+ NVGKS+L+N+LV + TS A T+H + + N+P + D Sbjct: 20 VSIIGKPNVGKSTLMNVLVGERMSIITSKAQT-TRHRIIGI---LNGNHENIPFQLVYSD 75 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 P G + K DS + L + + V + G K + +V L++ Sbjct: 76 TP--GVIKPSYKLHDSMMTFVKGSLEDADVVLFVVEI-----GEKAAEHEVLPLLNRTQS 128 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +VL KID + ++ +++ + I +P A +IP S++++ I L A++ Sbjct: 129 PVVLVLNKIDLSNEEEVKQKMQEWENEI--HPAA---IIPISALEKANIGTLFDAVV 180 >gi|50365015|ref|YP_053440.1| GTP-binding protein EngA [Mesoplasma florum L1] gi|81695689|sp|Q6F1R7|DER_MESFL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|50363571|gb|AAT75556.1| GTP-binding protein, cell cycle control [Mesoplasma florum L1] Length = 435 Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 11/121 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKSSL+N L+ + + S+ PG T + S +K N L+D Sbjct: 177 VSIIGRPNVGKSSLVNSLIGEERMI-VSDIPGTT------LDAVDSVVKVNNIEYTLIDT 229 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV--FSFLDKKA 149 G +NV+ + L R L+ + V L++D + +D ++ +F +KK Sbjct: 230 AGIRKKSKIFQNVEKYSYL--RSLTTINGSDVVLLMLDASVPISDLDTNIGGLAFEEKKP 287 Query: 150 V 150 + Sbjct: 288 I 288 >gi|81301257|ref|YP_401465.1| GTP-binding protein HflX [Synechococcus elongatus PCC 7942] gi|81170138|gb|ABB58478.1| GTP-binding protein HflX [Synechococcus elongatus PCC 7942] Length = 535 Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 28/190 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P IA G +N GKS+L+NIL + L T + R LN +N + Sbjct: 363 PSIAIVGYTNAGKSTLLNILTQAEVYAADQLFATLDPTTRRLVLN-------ANPGSEPD 415 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV--KQIDQDVF 142 + L D G+ + P VD++ L E + + L+D H QI Q V Sbjct: 416 VVLLTDTVGFIH-ELPPPLVDAFRA----TLEEVTEADALLHLVDLSHPAWYAQI-QSVM 469 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 S L + V+ +L +K+ T+ ETL + +P+ + S+ + G+E L Sbjct: 470 SILREMPVTPGPILLAFNKIDAATS-ETLAIAQ-------AEYPQAVFLSASRGLGLETL 521 Query: 203 RKAILETINY 212 R+ + + ++Y Sbjct: 522 RQRLGQLVHY 531 >gi|33239840|ref|NP_874782.1| GTP-binding protein EngA [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|41017014|sp|Q7VDI8|DER_PROMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|33237366|gb|AAP99434.1| Predicted GTPase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 456 Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust. Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 13/140 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + K A S G T+ D S ++ L Sbjct: 177 PIQVAIVGRPNVGKSSLLNAICGEKR-AIVSAIRGTTRD-----TIDTSIVREG-KLWKL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS--ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D G ++ + +G I R ERS + CV L+ID GV + DQ + ++ Sbjct: 230 IDTAGIRRRKSVNYGPEFFG--INRSFKAIERSDV-CV-LVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLSPTT 166 ++ + +V+ K D + T Sbjct: 286 EEGRACLVVVNKWDAVEKDT 305 >gi|290988049|ref|XP_002676734.1| predicted protein [Naegleria gruberi] gi|284090338|gb|EFC43990.1| predicted protein [Naegleria gruberi] Length = 347 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 8/68 (11%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K P +G NVGKSS+IN L+ +K A+ PG T+ + FF K N Sbjct: 143 KTIPYTFLIAGVPNVGKSSIINKLIEKKK-AKEGALPGVTRGMGFFPMKTRENC------ 195 Query: 86 MALVDMPG 93 L+D PG Sbjct: 196 -LLLDTPG 202 >gi|257468039|ref|ZP_05632135.1| ferrous iron transport protein B [Fusobacterium ulcerans ATCC 49185] gi|317062325|ref|ZP_07926810.1| ferrous iron transporter B [Fusobacterium ulcerans ATCC 49185] gi|313688001|gb|EFS24836.1| ferrous iron transporter B [Fusobacterium ulcerans ATCC 49185] Length = 731 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 9/70 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++AF+G NVGKS+LIN + K + N PG T V K + + LVD Sbjct: 3 KLAFTGNPNVGKSALINAIAGSK--LKVGNWPGVT------VEKKEAIFNYKGEEIKLVD 54 Query: 91 MPGYGYARAP 100 +PG Y+ +P Sbjct: 55 LPGV-YSLSP 63 >gi|118468050|ref|YP_888037.1| GTP-binding protein EngA [Mycobacterium smegmatis str. MC2 155] gi|118169337|gb|ABK70233.1| GTP-binding protein EngA [Mycobacterium smegmatis str. MC2 155] Length = 471 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 A PP +A GR NVGKS+L+N ++ R+ A + PG T+ Sbjct: 33 APPPVLAIVGRPNVGKSTLVNRILGRRE-AVVQDVPGVTR 71 >gi|317496984|ref|ZP_07955314.1| small GTP-binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316895996|gb|EFV18148.1| small GTP-binding domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 402 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 20/140 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA G+ N GKSS+IN + N++ LA S+ G T V K L L Sbjct: 7 PRGDRIHIALFGKRNAGKSSVINAMTNQE-LAIVSDVKGTTTDP---VYKAMELLP--LG 60 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL----RCVYLLIDCRHGVKQIDQD 140 + ++D PG +D G L + + + + +++D G+ + ++D Sbjct: 61 PVVMIDTPG----------LDDEGELGEKRVKKAKEVLGKADIALVIMDATAGMTEFEED 110 Query: 141 VFSFLDKKAVSYQIVLTKID 160 + ++ + + Y V K+D Sbjct: 111 MIRLIEDRKIPYLKVYNKMD 130 >gi|237747713|ref|ZP_04578193.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13] gi|229379075|gb|EEO29166.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13] Length = 446 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 11/176 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS++IN L+ + + + PG T+ +P + + LVD Sbjct: 183 KLAIVGRPNVGKSTMINALLGEERVI-AFDLPGTTRD-AIEIP-----FERDGKQYTLVD 235 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + + D + F+ + Sbjct: 236 TAGLRKRGKVFQAIEKFS--VVKTLQAISEANVVLLLMDAQQDISEQDAHIAGFVLESGR 293 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K D L +E + + + A + S++K GI L ++I Sbjct: 294 ALVVGINKWDGLDQDKRKEIKSEVERKLHFLSFAKFHYV--SALKSTGISALMRSI 347 >gi|256383817|gb|ACU78387.1| ribosome-associated GTPase EngA [Mycoplasma mycoides subsp. capri str. GM12] gi|256384647|gb|ACU79216.1| ribosome-associated GTPase EngA [Mycoplasma mycoides subsp. capri str. GM12] gi|296455372|gb|ADH21607.1| ribosome-associated GTPase EngA [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 435 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 49/115 (42%), Gaps = 11/115 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K +IA GR NVGKSSL+N LVN +N S G T V FS N Sbjct: 171 KDDSTKIAIIGRPNVGKSSLVNSLVN-ENRMIVSEIEGTTLDA---VDISFS---YNKKK 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 ++D G + ++ + L R LS S V L+ID + DQD Sbjct: 224 YTVIDTAGIRKKSKLGQTIEKYSYL--RSLSAISNADIVLLMIDATKPIT--DQD 274 >gi|210612468|ref|ZP_03289326.1| hypothetical protein CLONEX_01527 [Clostridium nexile DSM 1787] gi|210151576|gb|EEA82583.1| hypothetical protein CLONEX_01527 [Clostridium nexile DSM 1787] Length = 826 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 26/184 (14%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP + G + GK+SL++ + N + R A G TQH+ +V N + Sbjct: 329 PPVVCVMGHVDHGKTSLLDAIRNTNVIDR--EAGGITQHIGAYVA------TVNGEKITF 380 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D PG+ A +R ST L++ GV + Q V + K Sbjct: 381 LDTPGHEAFTA------------MRMRGANST-DIAILVVAADDGV--MPQTVEAINHAK 425 Query: 149 AVSYQIVLT--KIDKLSPTTAQETLEKTKY-LIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 A +I++ KIDK S + E T+Y LI +P S+ +GIE L + Sbjct: 426 AAGIEIIVAVNKIDKPSANIDRVKQELTEYELIAEDWGGSTIFVPVSAKTGEGIEDLMEM 485 Query: 206 ILET 209 IL T Sbjct: 486 ILLT 489 >gi|146293744|ref|YP_001184168.1| GTP-binding protein EngA [Shewanella putrefaciens CN-32] gi|166225857|sp|A4Y8T6|DER_SHEPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145565434|gb|ABP76369.1| small GTP-binding protein [Shewanella putrefaciens CN-32] gi|319427118|gb|ADV55192.1| ribosome-associated GTPase EngA [Shewanella putrefaciens 200] Length = 488 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 59/135 (43%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ + Sbjct: 198 PIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRD-SIYIP-----MEREGREYVI 250 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +++ L V L+ID R GV + D + F Sbjct: 251 IDTAGVRRRSKVHQVIEKFS--VIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFALNA 308 Query: 149 AVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 309 GRALVIAVNKWDGID 323 >gi|158316815|ref|YP_001509323.1| small GTP-binding protein [Frankia sp. EAN1pec] gi|158112220|gb|ABW14417.1| small GTP-binding protein [Frankia sp. EAN1pec] Length = 462 Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 2/50 (4%) Query: 19 PEIGLLPKAG-PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 P G LP AG P +A GR NVGKS+L+N ++ R+ A + PG T+ Sbjct: 14 PVGGALPLAGGQPVLAVVGRPNVGKSTLVNRILGRRA-AVVEDVPGVTRD 62 >gi|262374928|ref|ZP_06068162.1| ribosome-associated GTPase EngA [Acinetobacter lwoffii SH145] gi|262309941|gb|EEY91070.1| ribosome-associated GTPase EngA [Acinetobacter lwoffii SH145] Length = 469 Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust. Identities = 28/132 (21%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ + + + PG T+ + ++P + + L+D Sbjct: 179 LAIIGRPNVGKSTLVNRLLGEERVV-AFDQPGTTRD-SIYIP-----FERDGRQYTLIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + IV+ L + +++D R G+ + D + + + + Sbjct: 232 AGVRRKGKVDEMIEKFS--IVKTLQAMKDANVIVVVVDARDGIVEQDLHLIGYALEAGRA 289 Query: 152 YQIVLTKIDKLS 163 I + K D ++ Sbjct: 290 MVIAVNKWDNMT 301 >gi|257465956|ref|ZP_05630267.1| choline kinase [Fusobacterium gonidiaformans ATCC 25563] gi|315917112|ref|ZP_07913352.1| choline kinase [Fusobacterium gonidiaformans ATCC 25563] gi|313690987|gb|EFS27822.1| choline kinase [Fusobacterium gonidiaformans ATCC 25563] Length = 598 Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 30/50 (60%) Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 Q+D D+F F ++K + + + L+PTTA++ LEK +++ T++ Sbjct: 378 QLDADLFYFQEQKGIKITKYIENAETLNPTTAKQNLEKVAVILKKLHTSN 427 >gi|167396079|ref|XP_001741891.1| hypothetical protein [Entamoeba dispar SAW760] gi|165893336|gb|EDR21629.1| hypothetical protein, conserved [Entamoeba dispar SAW760] Length = 299 Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 25/39 (64%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 LP++ +I G + GKSSL N ++N+KN + SN+P Sbjct: 3 LPESKKAKILLIGDTGYGKSSLGNFILNKKNAFQVSNSP 41 >gi|329121701|ref|ZP_08250318.1| tRNA modification GTPase TrmE [Dialister micraerophilus DSM 19965] gi|327468171|gb|EGF13657.1| tRNA modification GTPase TrmE [Dialister micraerophilus DSM 19965] Length = 459 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 25/175 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ N GKSSL+N L+ + A ++ PG T +D +L + L+ M Sbjct: 225 AIVGKPNAGKSSLLNTLLQEER-AIVTDIPGTT--------RDTIEESISLSGIPLILMD 275 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK-KAVS 151 G R + V+ G R E++ L V ++ID +++ D+ + + K KAV Sbjct: 276 TAGI-RKTENKVEKIGIERARESMEKADL--VLMVIDSSKELEESDKKLLEEISKRKAV- 331 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L K D L T +ET+ K Y P V+ S+ + G+ L K + Sbjct: 332 --VLLNKSD-LEKKTTKETVSK-------YAKDLP-VLEISAKNKTGMNKLEKVL 375 >gi|237742515|ref|ZP_04572996.1| GTP binding protein [Fusobacterium sp. 4_1_13] gi|229430163|gb|EEO40375.1| GTP binding protein [Fusobacterium sp. 4_1_13] Length = 298 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN LV+ K +A S+ G T+ N K N K+N +D Sbjct: 6 IAVVGRPNVGKSTLINKLVSEK-VAIVSDKAGTTRD-NI---KGILNFKDN--QYIFIDT 58 Query: 92 PG 93 PG Sbjct: 59 PG 60 >gi|115696664|ref|XP_001199006.1| PREDICTED: similar to Eukaryotic translation initiation factor 5B (eIF-5B) (Translation initiation factor IF-2) [Strongylocentrotus purpuratus] gi|115973953|ref|XP_001187110.1| PREDICTED: similar to Eukaryotic translation initiation factor 5B (eIF-5B) (Translation initiation factor IF-2) [Strongylocentrotus purpuratus] Length = 1349 Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 60/223 (26%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVP-----------KDFS 77 P + G + GK+ +++ + R + + A G TQ + +P ++F+ Sbjct: 761 PVVCVLGHVDTGKTKILDKI--RHSNVQDGEAGGITQQIGATMIPQQAIQDQTKMCREFA 818 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + +P + ++D PG+ +S+ L R S L++D HG++ Sbjct: 819 KEEMKIPGLLIIDTPGH----------ESFSNLRSR---GSSLCDIAILVVDIMHGLEPQ 865 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL-----SPT-------------TAQETLEKTKYLIR 179 + + L +K + + L KID+L SP T E E+TK +I Sbjct: 866 TIESINLLKQKKTPFIVALNKIDRLFEWKSSPQTDVTNAIKKQKRHTRDEFEERTKNIIT 925 Query: 180 NY---------------PTAHPEVIPTSSVKRKGIEVLRKAIL 207 + P + ++PTS++ G+ L I+ Sbjct: 926 EFAEQSLNAALFNDNPDPKTYISLVPTSAISGDGMGNLMALIV 968 >gi|312143999|ref|YP_003995445.1| GTP-binding protein Era [Halanaerobium sp. 'sapolanicus'] gi|311904650|gb|ADQ15091.1| GTP-binding protein Era [Halanaerobium sp. 'sapolanicus'] Length = 293 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 22/174 (12%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKS+L+N LV K + S P T++ + ++ K + +D PG Sbjct: 12 GRPNVGKSTLVNNLVGEK-INIISPRPQTTRN---SIKAIYTEEKGQI---IFIDTPGIH 64 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--DKKAVSYQ 153 AR +D + ++ S + + ++D + DQ ++ + KK + Y Sbjct: 65 QAR---NKLDKF--MLEEAYSSLDGIDIIIFILDASTYWGKNDQMIYDQIKSSKKNIIY- 118 Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V+ KIDK+S L + KY EVIP S++ K I+ L + I Sbjct: 119 -VMNKIDKISNKDL--LLRQKKY----SQKVGEEVIPISALNNKNIDTLLEEIF 165 >gi|307249747|ref|ZP_07531726.1| GTP-binding protein era [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858255|gb|EFM90332.1| GTP-binding protein era [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 304 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 20/188 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK IA GR NVGKS+L+N ++ +K ++ TS T+H + + ++ Sbjct: 8 PKTYCGFIAIVGRPNVGKSTLLNKILGQK-ISITSRKAQTTRHRIVGI-----HTEDQYQ 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD PG K+ ++ L+ R S S + V L+I G K D D Sbjct: 62 AI-YVDTPGLHI--EEKRAINR---LMNRAAS--SAIGDVDLIIFVVEGTKWTDDDEMVL 113 Query: 145 LDKKAVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +A +VL K+D + E L L + + A E++P S+ + K + +L Sbjct: 114 NKLRAAKAPVVLAINKVDNIKE--KDELLPHITELSKKFDFA--EILPISAQRGKNVHIL 169 Query: 203 RKAILETI 210 +K + +++ Sbjct: 170 QKIVRKSL 177 >gi|296535949|ref|ZP_06898098.1| GTP-binding protein Era [Roseomonas cervicalis ATCC 49957] gi|296263722|gb|EFH10198.1| GTP-binding protein Era [Roseomonas cervicalis ATCC 49957] Length = 319 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 17/141 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L+N L A+ S + Q F + + + L D Sbjct: 30 VAVVGAPNAGKSTLVNRLAG----AKVSIVSPKPQTTRFRIRAVVMQERTQI---VLTDT 82 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG +P++ +D ++ L++D R G+ + + + S L + V Sbjct: 83 PGIF---SPRRRLDR--AMVAAAWEGAQDADLALLIVDSRAGMTEAVESIISVLKRSRVP 137 Query: 152 YQIVLTKID-----KLSPTTA 167 +VL K D KL P TA Sbjct: 138 IWLVLNKSDLIDTKKLLPLTA 158 >gi|113969576|ref|YP_733369.1| GTP-binding protein EngA [Shewanella sp. MR-4] gi|117919682|ref|YP_868874.1| GTP-binding protein EngA [Shewanella sp. ANA-3] gi|123029832|sp|Q0HKV5|DER_SHESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225858|sp|A0KUJ9|DER_SHESA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|113884260|gb|ABI38312.1| small GTP-binding protein [Shewanella sp. MR-4] gi|117612014|gb|ABK47468.1| small GTP-binding protein [Shewanella sp. ANA-3] Length = 488 Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust. Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 9/135 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++P ++ + + Sbjct: 198 PIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRD-SIYIP-----MERDGREYVI 250 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +++ L V L+ID R G+ + D + F Sbjct: 251 IDTAGVRRRSKVHEVIEKFS--VIKTLKAVEDANVVLLIIDAREGIAEQDLGLLGFALNA 308 Query: 149 AVSYQIVLTKIDKLS 163 + I + K D + Sbjct: 309 GRALVIAVNKWDGID 323 >gi|256845852|ref|ZP_05551310.1| GTP-binding protein Era [Fusobacterium sp. 3_1_36A2] gi|256719411|gb|EEU32966.1| GTP-binding protein Era [Fusobacterium sp. 3_1_36A2] Length = 298 Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN LV+ K +A S+ G T+ N K N K+N +D Sbjct: 6 IAVVGRPNVGKSTLINKLVSEK-VAIVSDKAGTTRD-NI---KGILNFKDN--QYIFIDT 58 Query: 92 PG 93 PG Sbjct: 59 PG 60 >gi|153809063|ref|ZP_01961731.1| hypothetical protein BACCAC_03371 [Bacteroides caccae ATCC 43185] gi|149128396|gb|EDM19615.1| hypothetical protein BACCAC_03371 [Bacteroides caccae ATCC 43185] Length = 437 Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 21/151 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSS++N + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L++D G++ D ++FS Sbjct: 226 --YLVDTAGIRKKNKVNEDLEYYS--VIRSIRAIEGSDVCILMLDATRGIESQDLNIFSL 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTT--AQETLEK 173 + K +V+ K D + + Q+T E+ Sbjct: 282 IQKNQKGLVVVINKWDLVEDKSVKVQKTFEE 312 >gi|94311353|ref|YP_584563.1| GTP-binding protein Era [Cupriavidus metallidurans CH34] gi|93355205|gb|ABF09294.1| membrane-associated, 16S rRNA-binding GTPase [Cupriavidus metallidurans CH34] Length = 312 Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 15/171 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K ++ TS T+H + + D Sbjct: 25 VAIVGRPNVGKSTLMNALVGQK-ISITSRKAQTTRHRIVGIQ------TTDDTQYVFADT 77 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG+ A N L S S++ V +++ + D+ V S L K V Sbjct: 78 PGFQTRHASALN----RSLNRAVTSTLSSVDIVLFVVEAGY-FGPDDEKVLSLLPKN-VP 131 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V K+D++ ++ + + + + +P EV+P S+ R I+ L Sbjct: 132 VLLVCNKLDRIGEGRSEVMMPFLEQMGQRFP--FREVVPMSAKTRDHIQRL 180 >gi|323466656|gb|ADX70343.1| GTP-binding protein engA [Lactobacillus helveticus H10] Length = 435 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A G+ NVGKS+L N ++N++ LA + PG T+ N+ Sbjct: 4 PVVAIVGQPNVGKSTLFNRIINQR-LAIVEDKPGVTRDRNY 43 >gi|309807137|ref|ZP_07701114.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LactinV 03V1-b] gi|308166488|gb|EFO68690.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LactinV 03V1-b] Length = 370 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNR----KNLARTSNAPGRT 65 L K +I F G +NVGKS+LIN ++ KNL TS PG T Sbjct: 161 LATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTT 207 >gi|299747051|ref|XP_001839346.2| GTP-binding protein [Coprinopsis cinerea okayama7#130] gi|298407343|gb|EAU82462.2| GTP-binding protein [Coprinopsis cinerea okayama7#130] Length = 698 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P IA +G +NVGKSS IN L+ + L + A +P++ + L++N ++ Sbjct: 293 APYTIAVAGITNVGKSSFINSLLKQSALPVYTQASASRGPTTTELPQEVT-LESNGQSLR 351 Query: 88 LVDMPGYGY 96 ++D PG + Sbjct: 352 IIDTPGVSF 360 >gi|262037969|ref|ZP_06011387.1| ribosome-associated GTPase EngA [Leptotrichia goodfellowii F0264] gi|261748010|gb|EEY35431.1| ribosome-associated GTPase EngA [Leptotrichia goodfellowii F0264] Length = 439 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 21/119 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV + L+ + PG T+ + ++S KN LVD Sbjct: 5 VAIVGRPNVGKSTLFNKLVGDR-LSIVKDEPGVTRD-RLYRETEWSG-KN----FILVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSFL 145 G PK + ++R + E++ + V L+D + G+ +D+D+ + L Sbjct: 58 GGL----EPKTD-----DFMMRKIKEQAQVAIDEADVVIFLVDGKAGITGLDEDIANIL 107 >gi|303287344|ref|XP_003062961.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455597|gb|EEH52900.1| predicted protein [Micromonas pusilla CCMP1545] Length = 337 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 3/49 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 GL+P+ P A G NVGKS+LIN L N K A ++ PG T++L + Sbjct: 124 GLMPR--PVRTAIIGYPNVGKSALINRLTNSKACA-SAPRPGVTRNLRW 169 >gi|269863458|ref|XP_002651230.1| GTPase, predicted [Enterocytozoon bieneusi H348] gi|220064911|gb|EED42826.1| GTPase, predicted [Enterocytozoon bieneusi H348] Length = 381 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 10/80 (12%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 L + ++ L + I F G N+GKSSLINIL N K + + + PG T+ + Sbjct: 238 LLNVIRQLKTLYRKRTMSIGFVGYPNIGKSSLINILKN-KQVCKVAPIPGETKVWQYITL 296 Query: 74 KDFSNLKNNLPAMALVDMPG 93 + + L+D PG Sbjct: 297 ---------MKDVYLIDSPG 307 >gi|77457222|ref|YP_346727.1| GTP-binding protein Era [Pseudomonas fluorescens Pf0-1] gi|123605861|sp|Q3KHL8|ERA_PSEPF RecName: Full=GTPase Era gi|77381225|gb|ABA72738.1| GTP-binding protein [Pseudomonas fluorescens Pf0-1] Length = 300 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAM 86 +A GR NVGKS+L+N ++ +K LA TS P T+H L D + + P M Sbjct: 12 VAIVGRPNVGKSTLLNHILGQK-LAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGM 67 >gi|326793803|ref|YP_004311623.1| GTP-binding protein HSR1-related protein [Marinomonas mediterranea MMB-1] gi|326544567|gb|ADZ89787.1| GTP-binding protein HSR1-related protein [Marinomonas mediterranea MMB-1] Length = 452 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + G +N GK+SLI L+ K + N G T+H+ K + L Sbjct: 2 PINLLIVGHANTGKTSLIRTLIRDKGFGQVGNIAGTTRHVEAVDIK-----VERRSVLRL 56 Query: 89 VDMPGY 94 +D PG+ Sbjct: 57 IDTPGF 62 >gi|312190415|gb|ADQ43214.1| GTP binding protein [Eutrema parvulum] Length = 426 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 26/187 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 +A G NVGKS+L N ++ +K ++ ++ P T+H L ++ M L Sbjct: 131 VAVVGMPNVGKSTLSNQMIGQK-ISIVTDKPQTTRHRILGICSSPEYQ--------MILF 181 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLID-CR--HGVKQIDQDVFSFL 145 D PG +K + ++++ + + + CV +L+D C+ ++++ ++ L Sbjct: 182 DTPG-----VIEKKMHRLDTMMMKNVRDAAINADCVVILVDACKTPAKIEEVLKEGLGDL 236 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K+ +V+ K D + P + LE + T EVIP S+ GIE +++ Sbjct: 237 EKRP-PMLLVMNKKDLIKPGEIAKKLEWYEKF-----TDVDEVIPVSAKYGHGIEDVKEW 290 Query: 206 ILETINY 212 IL + + Sbjct: 291 ILSKLPF 297 >gi|296269145|ref|YP_003651777.1| GTP-binding protein Era [Thermobispora bispora DSM 43833] gi|296091932|gb|ADG87884.1| GTP-binding protein Era [Thermobispora bispora DSM 43833] Length = 303 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 19/172 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVDM 91 F GR NVGKS+L+N LV K +A TS+ P T+ + V + + L +VD Sbjct: 13 CFVGRPNVGKSTLMNALVGTK-VAITSSKPQTTRRAIRGIVHRPDAQL-------IIVDT 64 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG+ R + +DS L++ LSE + + I + + D+ + L KAV Sbjct: 65 PGFHRPRTLLGERLDS---LVLSTLSE---VDVIGFCIPANEPIGKGDRFITEKL--KAV 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 V+ + K ++E + K + E++P S+V + ++VL Sbjct: 117 KETPVVAIVTKCD-VASREQIVKQLVAVEQLVDFAEEIVPVSAVSGERLDVL 167 >gi|237745211|ref|ZP_04575692.1| GTP binding protein [Fusobacterium sp. 7_1] gi|229432440|gb|EEO42652.1| GTP binding protein [Fusobacterium sp. 7_1] Length = 298 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN LV+ K +A S+ G T+ N K N K+N +D Sbjct: 6 IAVVGRPNVGKSTLINKLVSEK-VAIVSDKAGTTRD-NI---KGILNFKDN--QYIFIDT 58 Query: 92 PG 93 PG Sbjct: 59 PG 60 >gi|254413882|ref|ZP_05027651.1| GTP-binding proten HflX, putative [Microcoleus chthonoplastes PCC 7420] gi|196179479|gb|EDX74474.1| GTP-binding proten HflX, putative [Microcoleus chthonoplastes PCC 7420] Length = 532 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 38/199 (19%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLK 80 K P I+ G +N GKS+L+N L N + L T + R +P ++ Sbjct: 354 KQDVPTISVVGYTNAGKSTLLNTLTNAEVYTADQLFATLDPTTRR------LPITYAETG 407 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID-Q 139 ++ + L D G+ + P VDS+ L E + + L+D H Q + Sbjct: 408 ESITVL-LTDTVGFIH-ELPPPLVDSFRA----TLEEVTEADALIHLVDLSHPAWQNHIR 461 Query: 140 DVFSFLDKKAVS---YQIVLTKIDKLSPTT---AQETLEKTKYLIRNYPTAHPEVIPTSS 193 V S L V+ +V KID + T AQE P+ + S+ Sbjct: 462 SVMSILADMPVTPGPILVVFNKIDDVDSDTLVLAQEEF--------------PQGVFVSA 507 Query: 194 VKRKGIEVLRKAILETINY 212 KR G+E LR+ I + ++Y Sbjct: 508 SKRLGLETLRQKIAQLVDY 526 >gi|108759687|ref|YP_631948.1| GTP-binding protein EngA [Myxococcus xanthus DK 1622] gi|122981004|sp|Q1D5X5|DER_MYXXD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|108463567|gb|ABF88752.1| GTP-binding protein EngA [Myxococcus xanthus DK 1622] Length = 459 Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 9/136 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G +A GR NVGKS+L+N ++ K + S+ G T+ P D S L Sbjct: 178 PDDGIIRLAIIGRPNVGKSTLVNAILKEKRVV-ASDVAGTTRD-----PVD-SELTYKDR 230 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + L D G ++ + V+ + + + ERS + LL+D D + Sbjct: 231 KLLLTDTAGIRRKKSIAQRVEQFSVVAALKVMERSDV--AVLLMDATEPAVDQDAKLAGL 288 Query: 145 LDKKAVSYQIVLTKID 160 +++ + IV+ K D Sbjct: 289 AEERGRALVIVVNKWD 304 >gi|328705368|ref|XP_001952867.2| PREDICTED: protein peanut-like isoform 1 [Acyrthosiphon pisum] Length = 456 Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 26/155 (16%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN---NLPAMALVDMP 92 GRS +GKS+LIN + + P V + LK NL ++ +VD P Sbjct: 74 GRSGLGKSTLINTMFLADIYGKEHPGPSLRVGKTVRVETNRCMLKEKGVNL-SLTVVDTP 132 Query: 93 GYGYARAPKKNVDSWGGLI-------VRYLSERSTLR-----------CVYLLIDCRHGV 134 G+G A N D W ++ YL+ S + C+Y L HG+ Sbjct: 133 GFGDA---VDNSDCWQPVLEYIESRYEEYLNAESRVNRKVQHDSRVHCCLYFLESNSHGM 189 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 +D + L K V+ +++K D ++P E Sbjct: 190 TPLDVEFMQRLHDK-VNIIPIISKADTMTPDEVTE 223 >gi|310792411|gb|EFQ27938.1| hypothetical protein GLRG_03082 [Glomerella graminicola M1.001] Length = 657 Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 9/59 (15%) Query: 13 IFLRGVPEIGLLPKAGPP---EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 IFL PE A P +I G NVGKSS IN L+ K ++ S+ PG+T+H Sbjct: 340 IFLSHAPE-----NAEPGHKLQIGLVGYPNVGKSSTINALIGAKKVS-VSSTPGKTKHF 392 >gi|161507460|ref|YP_001577414.1| GTP-binding protein EngA [Lactobacillus helveticus DPC 4571] gi|260101628|ref|ZP_05751865.1| ribosome-associated GTPase EngA [Lactobacillus helveticus DSM 20075] gi|172048280|sp|A8YV35|DER_LACH4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|160348449|gb|ABX27123.1| phosphoglycerate dehydrogenase [Lactobacillus helveticus DPC 4571] gi|260084561|gb|EEW68681.1| ribosome-associated GTPase EngA [Lactobacillus helveticus DSM 20075] Length = 435 Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 P +A G+ NVGKS+L N ++N++ LA + PG T+ N+ Sbjct: 4 PVVAIVGQPNVGKSTLFNRIINQR-LAIVEDKPGVTRDRNY 43 >gi|297559688|ref|YP_003678662.1| GTP-binding protein Era [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844136|gb|ADH66156.1| GTP-binding protein Era [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 322 Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust. Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F GR NVGKS+L+N LV +K +A TSN P T+ Sbjct: 28 CFVGRPNVGKSTLMNALVGQK-VAITSNRPQTTR 60 >gi|67923219|ref|ZP_00516706.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era [Crocosphaera watsonii WH 8501] gi|67854950|gb|EAM50222.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era [Crocosphaera watsonii WH 8501] Length = 314 Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 22/184 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TS T++ + L + VD Sbjct: 25 VGIIGRPNVGKSTLMNQLIGQK-IAITSPVSQTTRN------RLRGILTTEKAQIIFVDT 77 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG K S G +IV+ + + + + L++D D+ + L K V Sbjct: 78 PGI------HKPHHSLGKIIVKNAKTAINAVDIILLVVDSSTKSGGGDRYIIDLL--KTV 129 Query: 151 SYQIV--LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + I+ L K D+ P QE E LI++Y + ++ S++ G+E L+ +++E Sbjct: 130 NQPIILGLNKSDQ-QPENYQEIDESYASLIQDY---NWPILKFSALTGDGLENLQNSLIE 185 Query: 209 TINY 212 +++ Sbjct: 186 QLDF 189 >gi|323337587|gb|EGA78832.1| Lsg1p [Saccharomyces cerevisiae Vin13] Length = 507 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G NVGKSS IN LV K ++ S+ PG+T+H D ++ L D Sbjct: 339 IGLVGYPNVGKSSTINSLVGAKKVS-VSSTPGKTKHFQTIKLSD---------SVMLCDC 388 Query: 92 PG 93 PG Sbjct: 389 PG 390 >gi|282878065|ref|ZP_06286870.1| ribosome-associated GTPase EngA [Prevotella buccalis ATCC 35310] gi|281299805|gb|EFA92169.1| ribosome-associated GTPase EngA [Prevotella buccalis ATCC 35310] Length = 437 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 19/136 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSSLIN + +A T+ T+ F DF Sbjct: 176 PRFAVVGRPNAGKSSLINAFIGEDRHIVTEIAGTTRDSIYTRFDKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L+ID G++ D ++F Sbjct: 226 --YLVDTAGIRRKSKVSEDLEFYS--VMRSIRSIENSDVCILMIDATRGIESQDMNIFQL 281 Query: 145 LDKKAVSYQIVLTKID 160 + K S +V+ K D Sbjct: 282 IQKNHKSLVVVVNKWD 297 >gi|282901593|ref|ZP_06309512.1| tRNA modification GTPase TrmE [Cylindrospermopsis raciborskii CS-505] gi|281193519|gb|EFA68497.1| tRNA modification GTPase TrmE [Cylindrospermopsis raciborskii CS-505] Length = 460 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 31/194 (15%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G L ++G ++A GR NVGKSSL+N ++ + A ++ PG T+ + + + Sbjct: 217 EKGELLRSGL-KVAIVGRPNVGKSSLLNAW-SQCDRAIVTDLPGTTRDI-----VESQLV 269 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 +P L D G R V+ G + R ++ V L ID G + D+ Sbjct: 270 VGGIPIQVL-DTAGI---RETVDQVEKLG--VERSRQAANSADLVLLTIDATAGWQSGDE 323 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 +++ + + + +V+ KID + +EK + T++ + + Sbjct: 324 EIYQQVKHRPLI--LVINKIDLVEDLGGICSPNIEKA--------------VKTAAAQNR 367 Query: 198 GIEVLRKAILETIN 211 GIE L +AILE + Sbjct: 368 GIEDLEQAILEVVQ 381 >gi|259501944|ref|ZP_05744846.1| selenocysteine-specific translation elongation factor [Lactobacillus antri DSM 16041] gi|259170121|gb|EEW54616.1| selenocysteine-specific translation elongation factor [Lactobacillus antri DSM 16041] Length = 625 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 38/188 (20%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAP-----GRTQHLNFFVPKDFSNLKNNLPA-- 85 A +G + GK++LI L T AP G T +L F +LP+ Sbjct: 7 ATAGHVDHGKTTLIKRLTG----IDTDTAPEEKKRGLTINLGFAY--------FDLPSKK 54 Query: 86 -MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD---V 141 +A VD+PG+ + +S + + L++D GV ++ + Sbjct: 55 RIAFVDVPGHEK-------------FLKNMISGLTGIDMALLVVDAGEGVMPQTEEHAAI 101 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 S L K ++ I +TK D + P Q T+E + +N P ++ T +V +GI+ Sbjct: 102 LSLLGIK--NFVIAVTKADTVDPEMCQLTIEDIREHFKNGPLEKAPLVVTDAVSGRGIKE 159 Query: 202 LRKAILET 209 L + ET Sbjct: 160 LIAVMDET 167 >gi|254302672|ref|ZP_04970030.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322864|gb|EDK88114.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 296 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN LV+ K +A S+ G T+ N K N K+N +D Sbjct: 6 IAVVGRPNVGKSTLINKLVSEK-VAIVSDKAGTTRD-NI---KGILNFKDN--QYIFIDT 58 Query: 92 PG 93 PG Sbjct: 59 PG 60 >gi|94989793|ref|YP_597893.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS10270] gi|94993678|ref|YP_601776.1| GTP-binding protein EngA [Streptococcus pyogenes MGAS10750] gi|166225863|sp|Q1JIH4|DER_STRPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225864|sp|Q1J8C9|DER_STRPF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|94543301|gb|ABF33349.1| GTP-binding protein [Streptococcus pyogenes MGAS10270] gi|94547186|gb|ABF37232.1| GTP-binding protein [Streptococcus pyogenes MGAS10750] Length = 436 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 10/134 (7%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSSLIN ++ + S G T+ + F++ ++ Sbjct: 175 IRFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTHFTDADGQ--EFTMI 228 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + +N + + ++R + V ++I+ G+++ D+ + F + Sbjct: 229 DTAGMRKSGKIYENTEKYS--VMRAMRAIDRSDVVLMVINAEEGIREYDKRIAGFAHEAG 286 Query: 150 VSYQIVLTKIDKLS 163 IV+ K D L Sbjct: 287 KGMIIVVNKWDTLD 300 >gi|34764123|ref|ZP_00144997.1| GTP binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886109|gb|EAA23411.1| GTP binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 298 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN LV+ K +A S+ G T+ N K N K+N +D Sbjct: 6 IAVVGRPNVGKSTLINKLVSEK-VAIVSDKAGTTRD-NI---KGILNFKDN--QYIFIDT 58 Query: 92 PG 93 PG Sbjct: 59 PG 60 >gi|329925043|ref|ZP_08279987.1| hypothetical protein HMPREF9412_6543 [Paenibacillus sp. HGF5] gi|328940162|gb|EGG36494.1| hypothetical protein HMPREF9412_6543 [Paenibacillus sp. HGF5] Length = 348 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 24/179 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G N GKSS +N +V + +A PG T ++ KD ++ +D Sbjct: 37 IALIGDVNTGKSSTMNRIVGEE-VAGVGAEPGETTVIHPHKYKDH---------ISFIDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG V + Y + + ++ L + ++ F + + Sbjct: 87 PGLNDVNTANSEV------TLNYYKQADIV--LFFLNAAGTVFSEAEKKSFDKIQSVNSN 138 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 IVL KID A + +++ IR EV+P SS + I+ LR +ILE + Sbjct: 139 ILIVLNKID------AADEIDRLVARIRKETEGRYEVVPVSSRTGQNIDRLRSSILEIL 191 >gi|311267715|ref|XP_003131697.1| PREDICTED: septin-4-like isoform 1 [Sus scrofa] Length = 477 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 82/205 (40%), Gaps = 31/205 (15%) Query: 32 IAFSGRSNVGKSSLINILV------NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +G S +GKS+LIN L +RK L+ + V + +K L Sbjct: 146 LMVAGESGLGKSTLINSLFLTDLYRDRKLLSAEERIMQTVEITKHAVDIEEKGVKLRL-- 203 Query: 86 MALVDMPGYGYARAPKKNVDSW------------------GGLIVRYLSERSTLRCVYLL 127 +VD PG+G A N + W GL + + + C+Y + Sbjct: 204 -TIVDTPGFGDA---VNNTECWKPVAEYIDQQFEQYFRDESGLNRKNIQDNRVHCCLYFI 259 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 HG++ +D + L ++ V+ +L K D L+P + K + I ++ + Sbjct: 260 SPFGHGLRPLDVEFMKALHQR-VNIVPILAKADTLTPPEVERKKRKIREEIEHFGIKVYQ 318 Query: 188 VIPTSSVKRKGIEVLRKAILETINY 212 S + + ++ +A+ E+I + Sbjct: 319 FPDCDSDEDEDFKLQDQALKESIPF 343 >gi|302335702|ref|YP_003800909.1| ribosome-associated GTPase EngA [Olsenella uli DSM 7084] gi|301319542|gb|ADK68029.1| ribosome-associated GTPase EngA [Olsenella uli DSM 7084] Length = 439 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 15/175 (8%) Query: 18 VPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 +PEI P G +A GR NVGKSSL N L R+ + ++ G T +D Sbjct: 165 LPEIREEPAVDDGTLNVAIIGRPNVGKSSLTNRLA-RRERSIVADVAGTT--------RD 215 Query: 76 FSNLKNNLPA--MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD G ++V+ + +VR L L++D G Sbjct: 216 AVDITIAWKGQRFCLVDTAGMRKRNQVHEDVEYYS--LVRGLEAMDRADVCLLVVDSTVG 273 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 V + DQ + + + IVL K D ++ ++ + + + T P V Sbjct: 274 VTEQDQKLAGMAIDRGCAVVIVLNKWDLITGDRQRDEVMSSLDARMTFATWAPAV 328 >gi|255727392|ref|XP_002548622.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240134546|gb|EER34101.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 660 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 12/83 (14%) Query: 13 IFLRGVPEIGLLPK--AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 +F+ P+ + P+ +I G NVGKSS IN LV K ++ S+ PG+T+H Sbjct: 319 LFMDSAPKFEVDPEFPDRKLQIGLVGYPNVGKSSTINALVGSKKVS-VSSTPGKTKH--- 374 Query: 71 FVPKDFSNLKNNLPAMALVDMPG 93 F S P + L D PG Sbjct: 375 FQTIHLS------PDVLLCDCPG 391 >gi|115535155|ref|NP_740787.2| hypothetical protein C53H9.2 [Caenorhabditis elegans] gi|89179570|gb|AAK68267.2|AF003143_2 Hypothetical protein C53H9.2a [Caenorhabditis elegans] Length = 554 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A P + G NVGKSS IN L K ++ S PG+T+H + D + P Sbjct: 294 PSAKPVMVGMVGYPNVGKSSTINKLAGGKKVS-VSATPGKTRHFQ-TIHIDSQLCLCDCP 351 Query: 85 AMALVDMPGYGYARA 99 + MP + + R+ Sbjct: 352 GLV---MPSFSFGRS 363 >gi|307245401|ref|ZP_07527489.1| GTP-binding protein era [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254356|ref|ZP_07536194.1| GTP-binding protein era [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258814|ref|ZP_07540546.1| GTP-binding protein era [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853742|gb|EFM85959.1| GTP-binding protein era [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862655|gb|EFM94611.1| GTP-binding protein era [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867165|gb|EFM99021.1| GTP-binding protein era [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 304 Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 20/188 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK IA GR NVGKS+L+N ++ +K ++ TS T+H + + ++ Sbjct: 8 PKTYCGFIAIVGRPNVGKSTLLNKILGQK-ISITSRKAQTTRHRIVGI-----HTEDQYQ 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A+ VD PG K+ ++ L+ R S S + V L+I G K D D Sbjct: 62 AI-YVDTPGLHI--EEKRAINR---LMNRAAS--SAIGDVDLIIFVVEGTKWTDDDEMVL 113 Query: 145 LDKKAVSYQIVLT--KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +A +VL K+D + E L L + + A E++P S+ + K + +L Sbjct: 114 NKLRAAKAPVVLAINKVDNIKEK--DELLPHITELSKKFDFA--EILPISAQRGKNVHIL 169 Query: 203 RKAILETI 210 +K + +++ Sbjct: 170 QKIVRKSL 177 >gi|255101596|ref|ZP_05330573.1| GTP-binding protein Era [Clostridium difficile QCD-63q42] Length = 297 Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N +V K +A S+ P T++ V D + +D Sbjct: 7 VSIVGRPNVGKSTLMNNVVGEK-IAIMSDKPQTTRNTIQAVYTDEE------MQIVFLDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ +E + + ++D + D+ + L Sbjct: 60 PG---IHKPK---NKLGEFMVKAATEAFKNVDLILFVVDDSKKIGPGDRKIIEDLRSVKT 113 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KID+L E + K R E++P S++K K + L K I Sbjct: 114 PIILVVNKIDQLD--QKDELFDIIKMYDRE--GIFKEIVPISALKGKNTDTLIKVI 165 >gi|205373354|ref|ZP_03226158.1| hypothetical protein Bcoam_08560 [Bacillus coahuilensis m4-4] Length = 285 Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 G NVGKS+LIN L +KN+A+T N PG T+ + Sbjct: 127 GIPNVGKSTLINRLA-KKNIAKTGNTPGVTKAQQWI 161 >gi|25011707|ref|NP_736102.1| GTP-binding protein EngA [Streptococcus agalactiae NEM316] gi|41017045|sp|Q8E3T9|DER_STRA3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|24413247|emb|CAD47326.1| Unknown [Streptococcus agalactiae NEM316] Length = 436 Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 13/145 (8%) Query: 29 PPEIAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I FS GR NVGKSSLIN ++ + S G T+ + +F + + Sbjct: 172 PDIIRFSLIGRPNVGKSSLINAILGEDRVI-ASPVAGTTRDA---IDTNFVDSQGQ--EY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +N + + ++R + V ++I+ G+++ D+ + F Sbjct: 226 TMIDTAGMRKSGKVYENTEKYS--VMRSMRAIDRSDVVLMVINAEEGIREYDKRIAGFAH 283 Query: 147 KKAVSYQIVLTK---IDKLSPTTAQ 168 + IV+ K I+K S T +Q Sbjct: 284 EAGKGIIIVVNKWDTIEKDSHTVSQ 308 >gi|331703406|ref|YP_004400093.1| GTP binding protein EngA [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801961|emb|CBW54115.1| GTP binding protein EngA, probably truncated inC terminal [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 435 Score = 34.7 bits (78), Expect = 8.9, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 49/115 (42%), Gaps = 11/115 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K +IA GR NVGKSSL+N LVN +N S G T V FS N Sbjct: 171 KDDSTKIAIIGRPNVGKSSLVNSLVN-ENRMIVSEIEGTTLDA---VDISFS---YNKKK 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 ++D G + ++ + L R LS S V L+ID + DQD Sbjct: 224 YTVIDTAGIRKKSKLGQTIEKYSYL--RSLSAISDADIVLLMIDATKPIT--DQD 274 >gi|322800500|gb|EFZ21504.1| hypothetical protein SINV_13942 [Solenopsis invicta] Length = 465 Score = 34.7 bits (78), Expect = 8.9, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 23/108 (21%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLP 84 K G I G NVGKSSL+N L+ +K + S PG T+H ++ K Sbjct: 300 KNGVLTIGCIGTPNVGKSSLMNALMGKK-VVSVSRTPGHTKHFQTIYLTK---------- 348 Query: 85 AMALVDMPGYGYARAPKKNVDSWGG-----------LIVRYLSERSTL 121 ++ L D PG + K + G +V++L+ER L Sbjct: 349 SVCLCDCPGLVFPSTVPKELQILMGSFPIAQVRDPYTVVQFLAERVNL 396 >gi|319649583|ref|ZP_08003739.1| GTPase [Bacillus sp. 2_A_57_CT2] gi|317398745|gb|EFV79427.1| GTPase [Bacillus sp. 2_A_57_CT2] Length = 290 Score = 34.7 bits (78), Expect = 8.9, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 12/70 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVDMPGY 94 G N GKS+LIN L +KN+ART N PG T+ + V K+ L+D PG Sbjct: 127 GIPNAGKSTLINRLA-KKNIARTGNTPGVTKAQQWIKVGKELE----------LLDTPGI 175 Query: 95 GYARAPKKNV 104 + + + V Sbjct: 176 LWPKFEDQEV 185 >gi|270159972|ref|ZP_06188628.1| GTP-binding protein Era [Legionella longbeachae D-4968] gi|289165284|ref|YP_003455422.1| membrane-associated, 16S rRNA-binding GTPase [Legionella longbeachae NSW150] gi|269988311|gb|EEZ94566.1| GTP-binding protein Era [Legionella longbeachae D-4968] gi|288858457|emb|CBJ12335.1| membrane-associated, 16S rRNA-binding GTPase [Legionella longbeachae NSW150] Length = 294 Score = 34.7 bits (78), Expect = 8.9, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 11/64 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH--LNFFVPKDFSNLKNNLPAMALV 89 IA GR NVGKS+L+N ++ +K ++ TS P T+H L D+ V Sbjct: 8 IALVGRPNVGKSTLLNCILQQK-VSITSKKPQTTRHSILGICTEGDYQ--------FVYV 58 Query: 90 DMPG 93 D PG Sbjct: 59 DTPG 62 >gi|254780941|ref|YP_003065354.1| GTP-binding protein Era [Candidatus Liberibacter asiaticus str. psy62] gi|254040618|gb|ACT57414.1| GTP-binding protein Era [Candidatus Liberibacter asiaticus str. psy62] Length = 311 Score = 34.7 bits (78), Expect = 8.9, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 18/150 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G +N GKS+L+N V A+ S + Q V S ++ + +D Sbjct: 25 VALVGATNAGKSTLVNRFVG----AKVSIVTHKVQTTRSIVRGIVSEKESQI---VFLDT 77 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG A+ DS+ L++R ST++ V L++D +K D+ + K+ Sbjct: 78 PGIFNAK------DSYHKLMIRL--SWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKR 129 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + ++L KID + P E E L+ Sbjct: 130 SSRLILILNKIDCVKPERLLEQAEIANKLV 159 >gi|229585363|ref|YP_002843865.1| GTP-binding proten HflX [Sulfolobus islandicus M.16.27] gi|228020413|gb|ACP55820.1| GTP-binding proten HflX [Sulfolobus islandicus M.16.27] Length = 356 Score = 34.7 bits (78), Expect = 8.9, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 30/188 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFV---PKDFSNLKNNLP 84 P + G +N GK+SL N L G TQ ++ F PK ++ NN Sbjct: 180 PSVGIVGYTNSGKTSLFNSLT------------GLTQKVDTKLFTTMSPKRYALSINNRK 227 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG---VKQIDQDV 141 M LVD G+ P + VD++ LSE + L+ID + + Q Sbjct: 228 IM-LVDTVGFIRG-IPPQIVDAF----FVTLSEAKYSDALILVIDSMFSENLLIETLQSS 281 Query: 142 FSFLDKKAVSYQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 F L + VS + + L KIDK+ ++ L + L + + +VIP S++KR Sbjct: 282 FEILREIGVSGKPILVALNKIDKIDGDLYKK-LNLIEKLSKELYSPIFDVIPISALKRTN 340 Query: 199 IEVLRKAI 206 +E+LR+ I Sbjct: 341 LELLRERI 348 >gi|221090528|ref|XP_002169558.1| PREDICTED: hypothetical protein, partial [Hydra magnipapillata] Length = 167 Score = 34.7 bits (78), Expect = 8.9, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%) Query: 34 FSGRSNVGKSSLINILVNRKNL--ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 FSG S VGKS+L+N + NL SN + QH F + +L N++ + + Sbjct: 22 FSGHSGVGKSTLVNAIEPTLNLKTKEISNTHSQGQHTTTFA--EMFDLSNDIRIIDTPGI 79 Query: 92 PGYGYARAPKKNVDSW 107 G+G K+ V + Sbjct: 80 RGFGMVDMEKQEVSDY 95 >gi|238926984|ref|ZP_04658744.1| GTP-binding protein EngA [Selenomonas flueggei ATCC 43531] gi|238885218|gb|EEQ48856.1| GTP-binding protein EngA [Selenomonas flueggei ATCC 43531] Length = 441 Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 11/147 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IA GR NVGKSSL+N L+ + + S+ PG T+ ++ KD + L+D Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEERVI-VSDVPGTTRDAIDTHFTKDGAK-------YLLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + ++R L V ++I+ G+ + D + ++ + Sbjct: 231 TAGMRRKGKITLPVERYS--VMRSLRAIDRAGVVLMVINAAEGILEQDTKIAGYVHESGK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYL 177 IV+ K D + TL T L Sbjct: 289 GVIIVVNKWDIFPEKNDKSTLRFTDDL 315 >gi|126700053|ref|YP_001088950.1| GTP-binding protein Era [Clostridium difficile 630] gi|254976030|ref|ZP_05272502.1| GTP-binding protein Era [Clostridium difficile QCD-66c26] gi|255093418|ref|ZP_05322896.1| GTP-binding protein Era [Clostridium difficile CIP 107932] gi|255307465|ref|ZP_05351636.1| GTP-binding protein Era [Clostridium difficile ATCC 43255] gi|255315163|ref|ZP_05356746.1| GTP-binding protein Era [Clostridium difficile QCD-76w55] gi|255517832|ref|ZP_05385508.1| GTP-binding protein Era [Clostridium difficile QCD-97b34] gi|255650948|ref|ZP_05397850.1| GTP-binding protein Era [Clostridium difficile QCD-37x79] gi|255656417|ref|ZP_05401826.1| GTP-binding protein Era [Clostridium difficile QCD-23m63] gi|260684017|ref|YP_003215302.1| GTP-binding protein [Clostridium difficile CD196] gi|260687677|ref|YP_003218811.1| GTP-binding protein [Clostridium difficile R20291] gi|296450136|ref|ZP_06891897.1| GTP-binding protein Era [Clostridium difficile NAP08] gi|296878517|ref|ZP_06902522.1| GTP-binding protein Era [Clostridium difficile NAP07] gi|306520828|ref|ZP_07407175.1| GTP-binding protein [Clostridium difficile QCD-32g58] gi|122973603|sp|Q182C3|ERA_CLOD6 RecName: Full=GTPase Era gi|115251490|emb|CAJ69323.1| GTP-binding protein Era [Clostridium difficile] gi|260210180|emb|CBA64374.1| GTP-binding protein [Clostridium difficile CD196] gi|260213694|emb|CBE05565.1| GTP-binding protein [Clostridium difficile R20291] gi|296260899|gb|EFH07733.1| GTP-binding protein Era [Clostridium difficile NAP08] gi|296430324|gb|EFH16166.1| GTP-binding protein Era [Clostridium difficile NAP07] Length = 297 Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N +V K +A S+ P T++ V D + +D Sbjct: 7 VSIVGRPNVGKSTLMNNVVGEK-IAIMSDKPQTTRNTIQAVYTDEE------MQIVFLDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG PK + G +V+ +E + + ++D + D+ + L Sbjct: 60 PG---IHKPK---NKLGEFMVKAATEAFKNVDLILFVVDDSKKIGPGDRKIIEDLRSVKT 113 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KID+L E + K R E++P S++K K + L K I Sbjct: 114 PIILVVNKIDQLD--QKDELFDIIKMYDRE--GIFKEIVPISALKGKNTDTLIKVI 165 >gi|67619861|ref|XP_667670.1| GTP-binding protein [Cryptosporidium hominis TU502] gi|54658817|gb|EAL37432.1| GTP-binding protein [Cryptosporidium hominis] Length = 604 Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF--FVPKDFSNLKNNLPA 85 G I G NVGKSS++N L + + S PG+T+HL P ++ + + Sbjct: 353 GELTIGMVGFPNVGKSSIVNALFGSQK-SSISRTPGKTKHLQTLRLKPPHLNDKEEDQDF 411 Query: 86 MALVDMPG 93 + L D PG Sbjct: 412 ITLCDCPG 419 >gi|262341130|ref|YP_003283985.1| GTP-binding protein EngA [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272467|gb|ACY40375.1| GTP-binding protein EngA [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 443 Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 11/130 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+ N LV R+ A G T+ + F N + N ++VD Sbjct: 5 VSIVGRPNVGKSTFFNRLVGRRK-AIVHITSGVTR------DRIFGNSEWNGVKFSVVDT 57 Query: 92 PGYGYARAPKKNVD-SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G+ +A + ++ I + E + L+D + GV D+++ L K Sbjct: 58 GGFSFATSENDVLEKEIKNQIFIAIKEADV---ILFLVDIKMGVLDTDREIAKILRKSQK 114 Query: 151 SYQIVLTKID 160 +V+ K+D Sbjct: 115 ITLLVVNKVD 124 >gi|256846327|ref|ZP_05551784.1| ribosome-associated GTPase EngA [Fusobacterium sp. 3_1_36A2] gi|256718096|gb|EEU31652.1| ribosome-associated GTPase EngA [Fusobacterium sp. 3_1_36A2] Length = 440 Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 21/138 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N LV K +A + PG T+ + ++S +V Sbjct: 3 PIVAIVGRPNVGKSTLFNNLVGDK-IAIVDDLPGVTRD-RLYRDAEWSG-----SEFVIV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G P+ N ++ + E++ + + ++D + G+ +D+++ Sbjct: 56 DTGGL----EPRNN-----DFLMAKIKEQAEVAMNEADVILFIVDGKSGLNPLDEEIAYI 106 Query: 145 LDKKAVSYQIVLTKIDKL 162 L KK + + KID Sbjct: 107 LRKKNKPVILCVNKIDNF 124 >gi|46125633|ref|XP_387370.1| hypothetical protein FG07194.1 [Gibberella zeae PH-1] Length = 666 Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 10/63 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G NVGKSS IN L+ K ++ S+ PG+T+H + P + L D Sbjct: 344 QVGLVGYPNVGKSSTINALIGSKKVS-VSSTPGKTKHFQTI---------HLSPDVVLCD 393 Query: 91 MPG 93 PG Sbjct: 394 CPG 396 >gi|332799113|ref|YP_004460612.1| GTP-binding protein engA [Tepidanaerobacter sp. Re1] gi|332696848|gb|AEE91305.1| GTP-binding protein engA [Tepidanaerobacter sp. Re1] Length = 439 Score = 34.7 bits (78), Expect = 9.1, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 12/141 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ NVGKSSL+N ++ + + S+ PG T+ S + N M +D Sbjct: 177 KVAIIGKPNVGKSSLLNAILGEERVI-VSDIPGTTRDAI------DSYFEINGKKMLFID 229 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++V+ + VR L V +++D + + D+ + + Sbjct: 230 TAGLRKKSRISEDVEYYS--TVRALGAIDRADVVLMVLDASQNISEQDKRIAGIAHEAGK 287 Query: 151 SYQIVLTK---IDKLSPTTAQ 168 + I++ K IDK S TT + Sbjct: 288 AVIIIVNKWDLIDKDSHTTDE 308 >gi|319901975|ref|YP_004161703.1| iron-only hydrogenase maturation protein HydF [Bacteroides helcogenes P 36-108] gi|319417006|gb|ADV44117.1| iron-only hydrogenase maturation protein HydF [Bacteroides helcogenes P 36-108] Length = 402 Score = 34.7 bits (78), Expect = 9.1, Method: Compositional matrix adjust. Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 28/189 (14%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A IA GR N GKSSL+N L ++ A S+ PG T P + + L Sbjct: 11 PNANRLHIAIFGRRNSGKSSLVNALTG-QDTALVSSVPGTTTD-----PVMKAMEVHLLG 64 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVR---YLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + +D PG+ + + G + V + ER+ + L+ C G ++++ Sbjct: 65 SCLFIDTPGF------DDDENKLGEMRVERTLQIVERTDIA----LLLCEDG-GILEKEW 113 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F L ++ + VL K D T + + YP + S+ K GI+ Sbjct: 114 FGMLTERKIPIVPVLNKFDL--RTDVDRLASDIERIFGQYP------VIVSAQKLIGIQN 165 Query: 202 LRKAILETI 210 + +AILE + Sbjct: 166 IFRAILEKL 174 >gi|313893315|ref|ZP_07826890.1| ribosome biogenesis GTPase Era [Veillonella sp. oral taxon 158 str. F0412] gi|313442211|gb|EFR60628.1| ribosome biogenesis GTPase Era [Veillonella sp. oral taxon 158 str. F0412] Length = 299 Score = 34.7 bits (78), Expect = 9.1, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ K +A S+ T++ V D + + +D Sbjct: 12 VAVVGRPNVGKSTLINALIGDK-IAIVSDKAQTTRNRIICVYTDEAK------QIVFMDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ + V ++ D + L + V Sbjct: 65 PG---VHKPKHKLGEF--MVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQLQRVKVP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAILET 209 +V+ KID L +E LE I +Y A+P VIP S+ ++ + + K + ET Sbjct: 120 VFLVVNKIDTLK---KEELLEA----IVSYQNAYPFAGVIPISAKDKENLPEILKVLEET 172 Query: 210 I 210 + Sbjct: 173 L 173 >gi|312871750|ref|ZP_07731838.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 3008A-a] gi|329920071|ref|ZP_08276902.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 1401G] gi|311092692|gb|EFQ51048.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 3008A-a] gi|328936525|gb|EGG32969.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 1401G] Length = 370 Score = 34.7 bits (78), Expect = 9.1, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNR----KNLARTSNAPGRT 65 L K +I F G +NVGKS+LIN ++ KNL TS PG T Sbjct: 161 LATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTT 207 >gi|291544277|emb|CBL17386.1| GTP-binding protein Era [Ruminococcus sp. 18P13] Length = 297 Score = 34.7 bits (78), Expect = 9.1, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + +GR+N GKSSL+N LV K +A SN P T+ Sbjct: 7 VTIAGRTNAGKSSLLNALVGEK-IASVSNKPQTTR 40 >gi|227828124|ref|YP_002829904.1| GTP-binding proten HflX [Sulfolobus islandicus M.14.25] gi|227830831|ref|YP_002832611.1| GTP-binding proten HflX [Sulfolobus islandicus L.S.2.15] gi|229579727|ref|YP_002838126.1| GTP-binding proten HflX [Sulfolobus islandicus Y.G.57.14] gi|229581605|ref|YP_002840004.1| GTP-binding proten HflX [Sulfolobus islandicus Y.N.15.51] gi|238620324|ref|YP_002915150.1| GTP-binding proten HflX [Sulfolobus islandicus M.16.4] gi|284998346|ref|YP_003420114.1| small GTP-binding protein [Sulfolobus islandicus L.D.8.5] gi|227457279|gb|ACP35966.1| GTP-binding proten HflX [Sulfolobus islandicus L.S.2.15] gi|227459920|gb|ACP38606.1| GTP-binding proten HflX [Sulfolobus islandicus M.14.25] gi|228010442|gb|ACP46204.1| GTP-binding proten HflX [Sulfolobus islandicus Y.G.57.14] gi|228012321|gb|ACP48082.1| GTP-binding proten HflX [Sulfolobus islandicus Y.N.15.51] gi|238381394|gb|ACR42482.1| GTP-binding proten HflX [Sulfolobus islandicus M.16.4] gi|284446242|gb|ADB87744.1| small GTP-binding protein [Sulfolobus islandicus L.D.8.5] gi|323475186|gb|ADX85792.1| GTP-binding proten HflX [Sulfolobus islandicus REY15A] gi|323477918|gb|ADX83156.1| GTP-binding proten HflX [Sulfolobus islandicus HVE10/4] Length = 356 Score = 34.7 bits (78), Expect = 9.1, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 30/188 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN--FFV---PKDFSNLKNNLP 84 P + G +N GK+SL N L G TQ ++ F PK ++ NN Sbjct: 180 PSVGIVGYTNSGKTSLFNSLT------------GLTQKVDTKLFTTMSPKRYALSINNRK 227 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG---VKQIDQDV 141 M LVD G+ P + VD++ LSE + L+ID + + Q Sbjct: 228 IM-LVDTVGFIRG-IPPQIVDAF----FVTLSEAKYSDALILVIDSMFSENLLIETLQSS 281 Query: 142 FSFLDKKAVSYQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 F L + VS + + L KIDK+ ++ L + L + + +VIP S++KR Sbjct: 282 FEILREIGVSGKPILVALNKIDKIDGDLYKK-LNLIEKLSKELYSPIFDVIPISALKRTN 340 Query: 199 IEVLRKAI 206 +E+LR+ I Sbjct: 341 LELLRERI 348 >gi|152990976|ref|YP_001356698.1| GTP-binding protein Obg [Nitratiruptor sp. SB155-2] gi|261277705|sp|A6Q4D2|OBG_NITSB RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|151422837|dbj|BAF70341.1| GTP-binding protein Obg [Nitratiruptor sp. SB155-2] Length = 367 Score = 34.7 bits (78), Expect = 9.1, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 22/151 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G NVGKS+LI+ + N K T L +F + + D Sbjct: 160 DVGLVGFPNVGKSTLISTISNAKPEVANYEFTTLTPKLGVVRVSEFE-------SFVMAD 212 Query: 91 MPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH------GVKQIDQDVFS 143 +PG G A K GL +++L + + +ID K + +++ + Sbjct: 213 IPGIIGGASEGK-------GLGLQFLKHIERTKSLLYMIDMSSYRDPLTQYKTLQKELKN 265 Query: 144 FLDKKAV-SYQIVLTKIDKLSPTTAQETLEK 173 F ++ A S+ I LTKID L A+E +EK Sbjct: 266 FSEELAKRSFAIALTKIDALQEDEAKEKIEK 296 >gi|259500527|ref|ZP_05743429.1| GTP-binding protein [Lactobacillus iners DSM 13335] gi|302191217|ref|ZP_07267471.1| GTP-binding protein YqeH [Lactobacillus iners AB-1] gi|325912153|ref|ZP_08174551.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 143-D] gi|259167911|gb|EEW52406.1| GTP-binding protein [Lactobacillus iners DSM 13335] gi|325476103|gb|EGC79271.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 143-D] Length = 370 Score = 34.7 bits (78), Expect = 9.2, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNR----KNLARTSNAPGRT 65 L K +I F G +NVGKS+LIN ++ KNL TS PG T Sbjct: 161 LATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTT 207 >gi|229828496|ref|ZP_04454565.1| hypothetical protein GCWU000342_00558 [Shuttleworthia satelles DSM 14600] gi|229793090|gb|EEP29204.1| hypothetical protein GCWU000342_00558 [Shuttleworthia satelles DSM 14600] Length = 310 Score = 34.7 bits (78), Expect = 9.2, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 24/180 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TSN P T++ V D + + +D Sbjct: 17 VAMIGRPNVGKSTLMNQLIGQK-IAITSNKPQTTRNRIQTVYTD-----PDRGQIVFLDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 PG A+ + G +V ++ERS + + LI+ V D+ + L++ Sbjct: 71 PGIHQAK------NKLGQYMV-GVAERSMKDVDLILWLIEPDTRVGGGDRHILKELEQIQ 123 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVLRKAIL 207 + +V+ KID + EK +I Y + E++P + G + L ++I Sbjct: 124 IPVFLVINKIDMVKK-------EKILAVIDTYRGEYDFDEILPVCARSGDGCKDLIESIF 176 >gi|194878732|ref|XP_001974118.1| GG21249 [Drosophila erecta] gi|190657305|gb|EDV54518.1| GG21249 [Drosophila erecta] Length = 575 Score = 34.7 bits (78), Expect = 9.2, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN L RK + S PG T+H F+ P + L D Sbjct: 335 IGCIGFPNVGKSSLINALKGRK-VVSVSRTPGHTKHFQTIFL----------TPLVRLCD 383 Query: 91 MPG 93 PG Sbjct: 384 CPG 386 >gi|149585562|ref|XP_001518204.1| PREDICTED: similar to Septin 1 [Ornithorhynchus anatinus] Length = 427 Score = 34.7 bits (78), Expect = 9.2, Method: Compositional matrix adjust. Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 36/199 (18%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA----MA 87 + +G S +GKS+LIN L +L + P + L + + ++ + Sbjct: 90 LMVAGESGLGKSTLINSLF-LTDLYKDRELPDASARLEQTLTIERRGVEIEEGGVKVKLT 148 Query: 88 LVDMPGYGYARAPKKNVDSWGGLI-------VRYLSERSTLR-----------CVYLLID 129 LVD PG+G A N D W ++ +YL + S L C+Y + Sbjct: 149 LVDTPGFGDA---VDNADCWLPVVRFIEEQFEQYLQDESGLNRKNIQDTRVHCCLYFISP 205 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ-------ETLEKTKYLIRNYP 182 G++ +D + +K V+ V+ K D L+P AQ + LE+ + I +P Sbjct: 206 FGRGLRPLDVAFLRAIHEK-VNIVPVIGKADALTPAEAQTLKQKIRDQLEEKEISIYQFP 264 Query: 183 TAHPEVIPTSSVKRKGIEV 201 + KR+ E+ Sbjct: 265 DCDSD--EDEDFKRQDAEM 281 >gi|154339357|ref|XP_001562370.1| GTP-binding protein-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062953|emb|CAM39401.1| guanine nucleotide-binding protein-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 901 Score = 34.7 bits (78), Expect = 9.2, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 11/63 (17%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAMALVD 90 I F G NVGKSSL+N + K + S PG T+H+ VP+ + LVD Sbjct: 710 IGFIGHPNVGKSSLLNCIRGTK-VVSVSPTPGHTKHIQTIPVPEAH---------LTLVD 759 Query: 91 MPG 93 PG Sbjct: 760 SPG 762 >gi|332295395|ref|YP_004437318.1| ferrous iron transport protein B [Thermodesulfobium narugense DSM 14796] gi|332178498|gb|AEE14187.1| ferrous iron transport protein B [Thermodesulfobium narugense DSM 14796] Length = 665 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 22/177 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G NVGKS++ N L A N PG T V K N + +VD+ Sbjct: 6 IALIGNPNVGKSAIFNELTGAN--AHVGNWPGVT------VEKKEGKFVYNDTKINVVDL 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A + IVR E+ L V ++D + V+ + +F L + Sbjct: 58 PGIYSLTASSIDERIARDYIVR---EKPDL--VVCIVDSTNLVRNLY--LFVLLKELGAK 110 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +VL ID + + + ++ L ++ TS+ K+ GI+ L+KAI E Sbjct: 111 TLLVLNMIDLVENKIEFDESKLSESL-------KTRIVKTSATKKIGIDELKKAIYE 160 >gi|312131342|ref|YP_003998682.1| ribosome-associated gtpase enga [Leadbetterella byssophila DSM 17132] gi|311907888|gb|ADQ18329.1| ribosome-associated GTPase EngA [Leadbetterella byssophila DSM 17132] Length = 437 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 19/188 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLK 80 + G P IA GR N GKSS +N L+ + ++A T+ T++ F KDF Sbjct: 174 EEGVPRIAILGRPNAGKSSFLNALLGKDRSIVTDIAGTTRDAIDTRYKMF--GKDF---- 227 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 L D G + K N D ++R + +L+D G++ D Sbjct: 228 ------ILTDTA--GIRKKAKVNEDLEFYSVLRSIKALDKSDVCIILLDATKGLESQDIS 279 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + +++ K D L + K + L R P + VI S++ ++ I Sbjct: 280 IIAQAHNAKKGIVLMVNKWDALEKDSKTADTMKKEILERIAPMNYMPVIFASALNKQRIF 339 Query: 201 VLRKAILE 208 + +A +E Sbjct: 340 QVIEAAME 347 >gi|309810198|ref|ZP_07704043.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 2503V10-D] gi|312872993|ref|ZP_07733053.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2062A-h1] gi|312874210|ref|ZP_07734244.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2052A-d] gi|312875587|ref|ZP_07735588.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2053A-b] gi|325912587|ref|ZP_08174970.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 60-B] gi|308169470|gb|EFO71518.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners SPIN 2503V10-D] gi|311088841|gb|EFQ47284.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2053A-b] gi|311090280|gb|EFQ48690.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2052A-d] gi|311091515|gb|EFQ49899.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners LEAF 2062A-h1] gi|325478008|gb|EGC81137.1| ribosome biogenesis GTPase YqeH [Lactobacillus iners UPII 60-B] Length = 370 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNR----KNLARTSNAPGRT 65 L K +I F G +NVGKS+LIN ++ KNL TS PG T Sbjct: 161 LATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTT 207 >gi|302388592|ref|YP_003824414.1| tRNA modification GTPase TrmE [Clostridium saccharolyticum WM1] gi|302199220|gb|ADL06791.1| tRNA modification GTPase TrmE [Clostridium saccharolyticum WM1] Length = 459 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 26/177 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E G+ N GKSSL+N+LV + A ++ G T+ K+ L++ ++ ++D Sbjct: 224 ETVILGKPNAGKSSLLNVLVGEER-AIVTDIAGTTRD----TLKEQIRLED--LSLNIID 276 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD-KKA 149 G R + V+ G R ++ + L + ++D + + D+++ +F++ +KA Sbjct: 277 TAGI---RDTQDVVEKIGVEKARSAAQEADL--IIYVVDGSCPLDENDEEILTFIESRKA 331 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 V ++L K D L P ++ L+ T H +VIP S+ +R GI L I Sbjct: 332 V---VLLNKTD-LIPVVTEDMLK--------MRTRH-QVIPISAKERLGIGNLENEI 375 >gi|325681534|ref|ZP_08161059.1| ribosome biogenesis GTPase Era [Ruminococcus albus 8] gi|324106801|gb|EGC01092.1| ribosome biogenesis GTPase Era [Ruminococcus albus 8] Length = 298 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 18/172 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + +GR+N GKSSL+N LV K +A S+ P T+ K L +D Sbjct: 7 VTIAGRANAGKSSLLNALVGEK-IAAVSDKPQTTR------TKITGVLTKGETQFVFMDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG A+ + +V ++E + + + L+ DC + ++ + Sbjct: 60 PGMHKAK------NKLSEHMVNTVNETIAGVDMIILMCDCTKKISDNEKSLIQSFKGGRS 113 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + L KID L ++ + K Y EV+P S + G++++ Sbjct: 114 KVILALNKIDLLD--NKEDVIAKLAEYSALYD--FEEVVPISVAENDGLDII 161 >gi|182415643|ref|YP_001820709.1| GTP-binding protein Obg/CgtA [Opitutus terrae PB90-1] gi|261277652|sp|B1ZZ37|OBG_OPITP RecName: Full=GTPase obg; AltName: Full=GTP-binding protein obg gi|177842857|gb|ACB77109.1| GTP-binding protein Obg/CgtA [Opitutus terrae PB90-1] Length = 346 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 28/190 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G N GKSSL ++ + RT+ P T H + D+ ++ + L D Sbjct: 160 DVGLVGFPNAGKSSLTCLITRAR--PRTAAYPFTTLHPQIGI-IDYPPDRHGRRRLRLAD 216 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI----------DCRHGVKQIDQD 140 +PG + + GL R+L R RC LL+ D R K + ++ Sbjct: 217 VPGLIEGASENR------GLGHRFL--RHIERCALLLVLIDMAGTDGRDPREDYKHLLRE 268 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + A+ + L +K+ A L K K R + T +V+P S + +GIE Sbjct: 269 LELY--DPALLKKPRLVAANKMDVEAAAANLSKFK---RRHRTV--DVLPLSCLTSEGIE 321 Query: 201 VLRKAILETI 210 +L+K +L+ + Sbjct: 322 LLKKELLKRV 331 >gi|152981185|ref|YP_001353813.1| GTP-binding protein EngA [Janthinobacterium sp. Marseille] gi|166198722|sp|A6SZW6|DER_JANMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|151281262|gb|ABR89672.1| GTP-binding protein EngA [Janthinobacterium sp. Marseille] Length = 447 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 9/139 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L+N L+ + + + PG T+ + +P + + L+D Sbjct: 182 KLAIVGRPNVGKSTLVNTLLGEERVI-AFDLPGTTRD-SIEIP-----FERDGKHYTLID 234 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + + D + F+ + Sbjct: 235 TAGIRRRGKVFEAIEKFS--VVKTLQSISEANVVLLLLDAQQDISEQDAHIAGFILESGR 292 Query: 151 SYQIVLTKIDKLSPTTAQE 169 + + + K D L+ E Sbjct: 293 ALVVGVNKWDGLTSDRRDE 311 >gi|68171944|ref|ZP_00545257.1| Small GTP-binding protein domain:GTP-binding protein Era [Ehrlichia chaffeensis str. Sapulpa] gi|67998634|gb|EAM85374.1| Small GTP-binding protein domain:GTP-binding protein Era [Ehrlichia chaffeensis str. Sapulpa] Length = 296 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 16/142 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G +N GKS+LIN+LV +K A T ++ + L N + +D P Sbjct: 12 AIVGTTNAGKSTLINMLVGQKVAAVTPKVQTTRVRMH-------AVLNNENVQLIFIDTP 64 Query: 93 GYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +PK ++ + IV+ ++S + + V LL+D ++ + + + + S + + + Sbjct: 65 GIF---SPKTKLEKF---IVKHAWMSLKG-IENVILLLDVKNYLNKHIERIISRIKQSNI 117 Query: 151 SYQIVLTKIDKLSPTTAQETLE 172 + +V+ KID + ++ + +E Sbjct: 118 NAILVVNKIDTVPTSSVDKAIE 139 >gi|289422583|ref|ZP_06424426.1| tRNA modification GTPase TrmE [Peptostreptococcus anaerobius 653-L] gi|289157155|gb|EFD05777.1| tRNA modification GTPase TrmE [Peptostreptococcus anaerobius 653-L] Length = 459 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 24/180 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ NVGKSSL+N ++ +N A + G T+ V ++F N+K +P + +VD Sbjct: 225 AILGKPNVGKSSLMNWILG-ENRAIVTEIAGTTRD----VIEEFVNIK-GIP-LKIVDTA 277 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R V+ G R ++ L++ +++++D LD A++ Sbjct: 278 GI---RETDDIVEKIG-----VEKSRDHMKSSDLVLVVLDSSRELEEDDLEILD--AINP 327 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 + L I+K+ + + ++K K I A +I S+++ KG+E + I ET+ Y Sbjct: 328 KKTLVLINKIDLESRLD-MDKVKEYI-----AEENIIHISAMENKGLESIHDKI-ETMVY 380 >gi|111115476|ref|YP_710094.1| ribosomal biogenesis GTPase [Borrelia afzelii PKo] gi|110890750|gb|ABH01918.1| hypothetical protein BAPKO_0687 [Borrelia afzelii PKo] Length = 268 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 10/58 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 G NVGKSS+IN+L +K+ A+ +N PG T+++ + N L DMPG Sbjct: 113 GVPNVGKSSIINLLSGKKS-AKVANKPGYTKNIQIVKINEEIN---------LFDMPG 160 >gi|313892276|ref|ZP_07825869.1| tRNA modification GTPase TrmE [Dialister microaerophilus UPII 345-E] gi|313119414|gb|EFR42613.1| tRNA modification GTPase TrmE [Dialister microaerophilus UPII 345-E] Length = 459 Score = 34.7 bits (78), Expect = 9.4, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 25/175 (14%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A G+ N GKSSL+N L+ + A ++ PG T +D +L + L+ M Sbjct: 225 AIVGKPNAGKSSLLNTLLQEER-AIVTDIPGTT--------RDTIEESISLSGIPLILMD 275 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK-KAVS 151 G R + V+ G R E++ L V ++ID +++ D+ + + K KAV Sbjct: 276 TAGI-RKTENKVEKIGIERARESMEKADL--VLMVIDSSKELEESDKKLLEEISKRKAV- 331 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++L K D L T +ET+ K Y P V+ S+ + G+ L K + Sbjct: 332 --VLLNKSD-LEKKTTKETVSK-------YAKDLP-VLEISAKNKTGMNKLEKVL 375 >gi|48477308|ref|YP_023014.1| GTP binding protein [Picrophilus torridus DSM 9790] gi|48429956|gb|AAT42821.1| GTP binding protein [Picrophilus torridus DSM 9790] Length = 359 Score = 34.7 bits (78), Expect = 9.4, Method: Compositional matrix adjust. Identities = 16/30 (53%), Positives = 20/30 (66%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRK 53 +PK G +A G NVGKSSL+N L N+K Sbjct: 55 VPKTGDATVALVGYPNVGKSSLLNKLTNKK 84 >gi|39939111|ref|NP_950877.1| GTP-binding protein Era [Onion yellows phytoplasma OY-M] gi|39722220|dbj|BAD04710.1| glycyl-tRNA synthetase [Onion yellows phytoplasma OY-M] Length = 295 Score = 34.7 bits (78), Expect = 9.4, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 28/184 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L +K +A TS P T+H K VD Sbjct: 12 IAILGRPNVGKSTLLNALTQQK-VAITSAKPQTTRH------KIIGICHEPNAQYIFVDT 64 Query: 92 PG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG Y + K N ++ + + + L D + K+ F KK Sbjct: 65 PGINQYKHLLNQKMNNIAFQSI--------KDVDLILFLTDSFYHPKEETLLKMIFQTKK 116 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAI 206 V +V+ KID+L + + +I +Y + VIP S++K K L++ I Sbjct: 117 PVF--LVINKIDRLKNKSQIDA------IILSYLNHFSFQTVIPLSAIKAKNTTFLKENI 168 Query: 207 LETI 210 + I Sbjct: 169 YQNI 172 >gi|119716151|ref|YP_923116.1| GTP-binding protein Era [Nocardioides sp. JS614] gi|226741224|sp|A1SHZ4|ERA_NOCSJ RecName: Full=GTPase Era gi|119536812|gb|ABL81429.1| GTP-binding protein Era [Nocardioides sp. JS614] Length = 313 Score = 34.7 bits (78), Expect = 9.4, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 25/169 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL-NFFVPKDFSNLKNNLPAMALVD 90 ++F GR N GKS+L N LV K + TS+ P T+ + V +D + L LVD Sbjct: 17 VSFVGRPNAGKSTLTNALVGSK-VVITSDKPQTTRTVVRGIVHRDDAQL-------ILVD 68 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQI---DQDVFSFL 145 PG R L+ L++ ++TL V ++ C +++ D+ + + + Sbjct: 69 TPGLHRPRT----------LLGERLNDLVKTTLAEVDVVAVCLPANEKVGPGDRFIVNEM 118 Query: 146 DK-KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K K + + TK D SP E L L T E++P S+ Sbjct: 119 AKIKRTTKVAIATKTDLASPDRIAEHLLDIARLGTETGTEWAEIVPVSA 167 >gi|58264644|ref|XP_569478.1| GTP-binding protein [Cryptococcus neoformans var. neoformans JEC21] gi|134109951|ref|XP_776361.1| hypothetical protein CNBC5780 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259035|gb|EAL21714.1| hypothetical protein CNBC5780 [Cryptococcus neoformans var. neoformans B-3501A] gi|57225710|gb|AAW42171.1| GTP-binding protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 743 Score = 34.7 bits (78), Expect = 9.4, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G NVGKSS IN L+ K ++ S PG+T+H V D + L D Sbjct: 403 VGLVGYPNVGKSSTINSLLGAKKVS-VSATPGKTKHFQTLVLSD---------TITLCDC 452 Query: 92 PG 93 PG Sbjct: 453 PG 454 >gi|328793826|ref|XP_001121197.2| PREDICTED: tRNA modification GTPase GTPBP3, mitochondrial-like [Apis mellifera] Length = 488 Score = 34.7 bits (78), Expect = 9.5, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 19/135 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKSS +N+L ++KN A ++ PG T +D L ++ ++ Sbjct: 248 VAILGKPNVGKSSFLNLL-SKKNAAIVTSLPGTT--------RDIIELTIDICGYPMILA 298 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV------FSFL 145 G P+ ++ G + S+++ + +I + VK +D F + Sbjct: 299 DTAGIRNNPENEIEIEGIKKTKEYSKKADF--IICIISAENNVKTSLEDFLKQYKNFLEI 356 Query: 146 DKKAVSYQIVLTKID 160 DKK V ++L KID Sbjct: 357 DKKRV--LLILNKID 369 >gi|325962851|ref|YP_004240757.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein TIGR00650 [Arthrobacter phenanthrenivorans Sphe3] gi|323468938|gb|ADX72623.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein TIGR00650 [Arthrobacter phenanthrenivorans Sphe3] Length = 527 Score = 34.7 bits (78), Expect = 9.5, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 74/192 (38%), Gaps = 41/192 (21%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A +G +N GKSSL+N L + L + F+ L + Sbjct: 306 PSVAIAGYTNAGKSSLLNRLTDAGVLVENAL---------------FATLDPTVRKAETA 350 Query: 90 DMPGY------GYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH----GVKQID 138 D GY G+ R+ P + V+++ L E + + ++D H G Sbjct: 351 DGLGYTLADTVGFVRSLPTQLVEAFRS----TLEEVADSDLILHVVDASHPDPEGQIAAV 406 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + VFS +D + V IVL K D P +++ P + S+ +G Sbjct: 407 RKVFSEVDARKVPEIIVLNKADAADP-----------FVVERLKQREPRHVVVSARTGEG 455 Query: 199 IEVLRKAILETI 210 I L +AI E I Sbjct: 456 IPELLRAISEAI 467 >gi|315653638|ref|ZP_07906558.1| GTP-binding protein [Lactobacillus iners ATCC 55195] gi|315489000|gb|EFU78642.1| GTP-binding protein [Lactobacillus iners ATCC 55195] Length = 370 Score = 34.7 bits (78), Expect = 9.5, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNR----KNLARTSNAPGRT 65 L K +I F G +NVGKS+LIN ++ KNL TS PG T Sbjct: 161 LATKGKNEDIYFVGTTNVGKSTLINAIIETRSEYKNLITTSKFPGTT 207 >gi|268318173|ref|YP_003291892.1| small GTP-binding protein [Rhodothermus marinus DSM 4252] gi|262335707|gb|ACY49504.1| small GTP-binding protein [Rhodothermus marinus DSM 4252] Length = 434 Score = 34.7 bits (78), Expect = 9.5, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 19/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKSSL N L+ ++ + ++ G T+ V K + + LV Sbjct: 175 PRLAIVGRPNVGKSSLTNALLGQER-SIVTDISGTTRDAVHSVLKYYGR------EIVLV 227 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC--VYLLIDCRHGVKQIDQDVFSFLDK 147 D G ++N++ + L +ER+ C LID G+ D + ++ Sbjct: 228 DTAGLRRRSRIRENIEFYATL----RTERALRECDVAITLIDATEGLTAQDIRILRQAEE 283 Query: 148 KAVSYQIVLTKIDKLS--PTTAQETLEKTKYLIRNYPT-AHPEVIPTSSVKRKGIEVLRK 204 +V+ K D + T +E E +Y + PT H ++ S+ R+ I + + Sbjct: 284 LRKGMVLVVNKWDLIEKDANTMKEWEEAIRYRL---PTWQHVPLVFISAKTRQRIHRVLE 340 Query: 205 AIL 207 A L Sbjct: 341 AAL 343 >gi|145501361|ref|XP_001436662.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124403804|emb|CAK69265.1| unnamed protein product [Paramecium tetraurelia] Length = 504 Score = 34.7 bits (78), Expect = 9.5, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 10/74 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F G NVGKSS+IN L RK + + + PG T+ + + L+D Sbjct: 317 IGFVGYPNVGKSSVINSLKKRK-VCKAAPVPGETRVWQYVAL---------TKRIYLIDC 366 Query: 92 PGYGYARAPKKNVD 105 PG Y K +V+ Sbjct: 367 PGVVYQHEGKDDVE 380 >gi|304436527|ref|ZP_07396500.1| ribosome-associated GTPase EngA [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370470|gb|EFM24122.1| ribosome-associated GTPase EngA [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 442 Score = 34.7 bits (78), Expect = 9.6, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 11/147 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IA GR NVGKSSL+N L+ + + S+ PG T+ ++ KD + L+D Sbjct: 179 IAVVGRPNVGKSSLVNRLLGEERVI-VSDVPGTTRDAIDTHFTKDGAK-------YLLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + ++R L V ++I+ G+ + D + ++ + Sbjct: 231 TAGMRRKGKITLPVERYS--VMRSLRAIDRAGVVLMVINAAEGILEQDTKIAGYVHESGK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYL 177 IV+ K D + TL T L Sbjct: 289 GVIIVVNKWDIFPEKNDKSTLRFTDDL 315 >gi|315284189|ref|ZP_07872091.1| tRNA modification GTPase TrmE [Listeria marthii FSL S4-120] gi|313612167|gb|EFR86407.1| tRNA modification GTPase TrmE [Listeria marthii FSL S4-120] Length = 425 Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 23/174 (13%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKSSL+N L+ + A ++ G T+ + +++ N++ +P + L+D Sbjct: 191 AIIGRPNVGKSSLLNQLIQEEK-AIVTDIAGTTRD----IIEEYVNVR-GVP-LRLIDTA 243 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G R + V+ G + R S ++ ++L+ + +D F +Y Sbjct: 244 GI---RETEDIVEKIG--VER--SRKALADADFILLVLNQNEELTAEDEALFEAAAGHNY 296 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +VL K D + +EK + + P ++ TS V +G+E L +AI Sbjct: 297 VVVLNKTDLETKL----DIEKVREIAGENP-----IVATSLVNDEGLEALEEAI 341 >gi|291544296|emb|CBL17405.1| iron-only hydrogenase maturation protein HydF [Ruminococcus sp. 18P13] Length = 390 Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 P A IAF G+ N GKSSL+N + N+ +A S+ PG T Sbjct: 7 PSADRLHIAFFGKRNAGKSSLMNAVTNQP-MAIVSDTPGTT 46 >gi|20129659|ref|NP_610055.1| nucleostemin 4 [Drosophila melanogaster] gi|7298708|gb|AAF53920.1| nucleostemin 4 [Drosophila melanogaster] gi|21428430|gb|AAM49875.1| LD10773p [Drosophila melanogaster] gi|220943500|gb|ACL84293.1| CG9320-PA [synthetic construct] gi|220953522|gb|ACL89304.1| CG9320-PA [synthetic construct] Length = 575 Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN L RK + S PG T+H F+ P + L D Sbjct: 335 IGCIGFPNVGKSSLINALKGRK-VVSVSRTPGHTKHFQTIFL----------TPLVRLCD 383 Query: 91 MPG 93 PG Sbjct: 384 CPG 386 >gi|293374967|ref|ZP_06621262.1| ribosome-associated GTPase EngA [Turicibacter sanguinis PC909] gi|325843340|ref|ZP_08167923.1| ribosome biogenesis GTPase Der [Turicibacter sp. HGF1] gi|292646377|gb|EFF64392.1| ribosome-associated GTPase EngA [Turicibacter sanguinis PC909] gi|325489369|gb|EGC91742.1| ribosome biogenesis GTPase Der [Turicibacter sp. HGF1] Length = 436 Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust. Identities = 29/136 (21%), Positives = 61/136 (44%), Gaps = 16/136 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + ++ K N+ + Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGSR-VSIVEDEPGITRD-RIYSSGEWLTRKFNVIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSE--RSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++ + R ++Y +E + + + R G+ Q DQ+V + L K Sbjct: 62 EIGDEPFMRQ------------IKYQAEIAMDEADVIVFVTNARDGITQADQEVANMLYK 109 Query: 148 KAVSYQIVLTKIDKLS 163 +++ K+D ++ Sbjct: 110 TKKPVVLIVNKVDDIN 125 >gi|269859681|ref|XP_002649565.1| GTPase, predicted [Enterocytozoon bieneusi H348] gi|220067116|gb|EED44584.1| GTPase, predicted [Enterocytozoon bieneusi H348] Length = 430 Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 10/80 (12%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 L + ++ L + I F G N+GKSSLINIL N K + + + PG T+ + Sbjct: 275 LLNVIRQLKTLYRKRTMSIGFVGYPNIGKSSLINILKN-KQVCKVAPIPGETKVWQYITL 333 Query: 74 KDFSNLKNNLPAMALVDMPG 93 + + L+D PG Sbjct: 334 ---------MKDVYLIDSPG 344 >gi|207345376|gb|EDZ72217.1| YGL099Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 325 Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I G NVGKSS IN LV K ++ S+ PG+T+H D ++ L D Sbjct: 24 IGLVGYPNVGKSSTINSLVGAKKVS-VSSTPGKTKHFQTIKLSD---------SVMLCDC 73 Query: 92 PG 93 PG Sbjct: 74 PG 75 >gi|170017042|ref|YP_001727961.1| GTP-binding protein engA [Leuconostoc citreum KM20] gi|238688961|sp|B1MYB5|DER_LEUCK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169803899|gb|ACA82517.1| GTP-binding protein engA [Leuconostoc citreum KM20] Length = 437 Score = 34.7 bits (78), Expect = 9.7, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 12/151 (7%) Query: 32 IAFS--GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 I FS GR NVGKSS++N ++ + S+ G T+ + F + + +V Sbjct: 176 IRFSIIGRPNVGKSSIVNAMLGEDRVI-VSDIEGTTRDA---IDSRFVTAEGD--EFIMV 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G +N + + ++R L + +++D G+++ D+ V F Sbjct: 230 DTAGMRKRGKVYENTEKYS--VMRALKAIDNSNVILMVLDAEAGIREQDKHVAGFAHDAG 287 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + I++ K D + T+++ + LIR+ Sbjct: 288 RAMIIIVNKWDAIEKDG--HTMKEFENLIRS 316 >gi|309355482|emb|CAP38852.2| hypothetical protein CBG_22213 [Caenorhabditis briggsae AF16] Length = 555 Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A P + G NVGKSS IN L K ++ S PG+T+H + D + P Sbjct: 295 PSAKPVMVGMVGYPNVGKSSTINKLAGGKKVS-VSATPGKTRHFQ-TIHIDSQLCLCDCP 352 Query: 85 AMALVDMPGYGYARA 99 + MP + + R+ Sbjct: 353 GLV---MPSFSFGRS 364 >gi|307564580|ref|ZP_07627120.1| ribosome-associated GTPase EngA [Prevotella amnii CRIS 21A-A] gi|307346738|gb|EFN92035.1| ribosome-associated GTPase EngA [Prevotella amnii CRIS 21A-A] Length = 437 Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 19/136 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRK-----NLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P A GR N GKSSLIN + + +A T+ T++ F DF Sbjct: 176 PRFAVVGRPNAGKSSLINSFIGEERNIVTEIAGTTRDSIYTRYNKFGF--DF-------- 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + L+ID G++ D ++F Sbjct: 226 --YLVDTAGIRRKNKVSEDLEFYS--VMRSIRSIENSDVCILMIDATRGIESQDMNIFQL 281 Query: 145 LDKKAVSYQIVLTKID 160 + + S +V+ K D Sbjct: 282 IQRNNKSLVVVVNKWD 297 >gi|195485817|ref|XP_002091245.1| GE12344 [Drosophila yakuba] gi|194177346|gb|EDW90957.1| GE12344 [Drosophila yakuba] Length = 575 Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 12/63 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-FFVPKDFSNLKNNLPAMALVD 90 I G NVGKSSLIN L RK + S PG T+H F+ P + L D Sbjct: 335 IGCIGFPNVGKSSLINALKGRK-VVSVSRTPGHTKHFQTIFL----------TPLVRLCD 383 Query: 91 MPG 93 PG Sbjct: 384 CPG 386 >gi|195941463|ref|ZP_03086845.1| ribosomal biogenesis GTPase [Borrelia burgdorferi 80a] Length = 268 Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 10/58 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 G NVGKSS+IN+L +K+ A+ +N PG T+++ + N L DMPG Sbjct: 113 GVPNVGKSSIINLLSGKKS-AKVANKPGYTKNIQIVKINEEIN---------LFDMPG 160 >gi|146328838|ref|YP_001209431.1| GTP-binding family protein [Dichelobacter nodosus VCS1703A] gi|146232308|gb|ABQ13286.1| GTP-binding family protein [Dichelobacter nodosus VCS1703A] Length = 449 Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 8/138 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKS+L+N L+ + L S G T+ +P + N A L+D Sbjct: 185 LAVLGRPNAGKSTLLNRLLGEERLV-ASPVAGTTRDA-IRIPY----VDNEGDAFTLIDT 238 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ + IV+ L V L++D + G+ D + + K+ Sbjct: 239 AGIRRKARVDDKIEKFS--IVKALEAIEQANVVILVLDAQAGITDQDAHLLGEIIKRGRG 296 Query: 152 YQIVLTKIDKLSPTTAQE 169 I + K D L T ++ Sbjct: 297 LVIAVNKWDHLDGETREK 314 >gi|90021085|ref|YP_526912.1| GTP-binding protein EngA [Saccharophagus degradans 2-40] gi|123396308|sp|Q21KS9|DER_SACD2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|89950685|gb|ABD80700.1| Small GTP-binding protein domain [Saccharophagus degradans 2-40] Length = 471 Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 11/116 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 KA ++A GR NVGKS+L+N ++ + + PG T+ + + + A Sbjct: 173 KAKGIKLAIVGRPNVGKSTLVNRMLGEDRVV-VYDMPGTTRDSIYI------EYERDGKA 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 ++D G + K +V+ + IV+ L V L++D + G+ +DQD+ Sbjct: 226 YTIIDTAGVRRRKNIKLSVEKFS--IVKTLQAIDDANVVILVMDAQEGI--VDQDL 277 >gi|146297756|ref|YP_001181527.1| tRNA modification GTPase TrmE [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166200470|sp|A4XN51|MNME_CALS8 RecName: Full=tRNA modification GTPase mnmE gi|145411332|gb|ABP68336.1| tRNA modification GTPase trmE [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 455 Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 25/175 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL+N L+ ++ + ++ PG T+ V ++ +++ +P + LVD G Sbjct: 227 GRPNVGKSSLLNRLL-KEERSIVTDIPGTTRD----VIEEVLDIE-GIP-IILVDTAG-- 277 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 R + V+ G + R L V +I+ G+ + D ++FS + K Y I+ Sbjct: 278 -VRQTEDIVERIG--VERTLKSVERADLVIFMIES-DGITKEDIEIFSSIKNK--KYIIL 331 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + K DK +Q+ ++K E I S K + +E++ KAI E I Sbjct: 332 VNKTDK-GINISQDEIKK---------LFGKEGIFISIAKDENLELVEKAIKEAI 376 >gi|66358824|ref|XP_626590.1| YawG/Kre35p-like, Yjeq GTpase [Cryptosporidium parvum Iowa II] gi|46227976|gb|EAK88896.1| YawG/Kre35p-like, Yjeq GTpase [Cryptosporidium parvum Iowa II] Length = 666 Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF--FVPKDFSNLKNNLPA 85 G I G NVGKSS++N L + + S PG+T+HL P ++ + + Sbjct: 415 GELTIGMVGFPNVGKSSIVNALFGSQK-SSISRTPGKTKHLQTLRLKPPHLNDKEEDQDF 473 Query: 86 MALVDMPG 93 + L D PG Sbjct: 474 ITLCDCPG 481 >gi|289613204|emb|CBI59798.1| unnamed protein product [Sordaria macrospora] Length = 656 Score = 34.7 bits (78), Expect = 9.9, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 10/63 (15%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ G NVGKSS IN L+ K ++ S+ PG+T+H +L +N+ L D Sbjct: 340 QVGLVGYPNVGKSSTINALIGAKKVS-VSSTPGKTKHFQTI------HLSDNV---LLCD 389 Query: 91 MPG 93 PG Sbjct: 390 CPG 392 >gi|114052056|ref|NP_001040346.1| septin [Bombyx mori] gi|95102582|gb|ABF51229.1| septin [Bombyx mori] Length = 379 Score = 34.7 bits (78), Expect = 9.9, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 27/155 (17%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL----VDM 91 G S +GKS+L+N L +L P T+ N V D S ++ + L VD Sbjct: 44 GESGLGKSTLVNSLF-LTDLYPERVIPDATEKTNQTVKLDASTVEIEERGVKLRLTVVDT 102 Query: 92 PGYGYARAPKKNVDSWGGLIV-------RYLSERSTLR-----------CVYLLIDCRHG 133 PGYG A N D + +I R+L + S L C Y + HG Sbjct: 103 PGYGDA---IDNTDCFRSIIQYIDEQFERFLRDESGLNRRNIVDNRIHCCFYFISPFGHG 159 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 +K +D + L K V+ V+ K D L+ Q Sbjct: 160 LKPLDIEFMKQLHNK-VNIVPVIAKADCLTKKEVQ 193 >gi|296328716|ref|ZP_06871231.1| GTP-binding protein Era [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154153|gb|EFG94956.1| GTP-binding protein Era [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 296 Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust. Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN LV+ K +A S+ G T+ N K N K+N +D Sbjct: 6 IAVVGRPNVGKSTLINKLVSEK-VAIVSDKAGTTRD-NI---KGILNFKDN--QYIFIDT 58 Query: 92 PG 93 PG Sbjct: 59 PG 60 >gi|157363889|ref|YP_001470656.1| small GTP-binding protein [Thermotoga lettingae TMO] gi|157314493|gb|ABV33592.1| small GTP-binding protein [Thermotoga lettingae TMO] Length = 403 Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 37/187 (19%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR NVGKSS +N ++ +N++ S+ G T P + N + + +D Sbjct: 11 VAIAGRRNVGKSSFLNAIIG-QNVSIVSDIAGTTTD-----PVYKTIELNPVGPVTFIDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID-------QDVFSF 144 PG+ D G L R ER+ R V DC G+ +D D+ S Sbjct: 65 PGF----------DDTGEL-GRLRIERA--RKVLYRADC--GILLVDSLPTRYEDDIVSL 109 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTSSVKRKGIEVLR 203 + + + IV+ K D L EK L+ Y + + I SS KG E++ Sbjct: 110 FREMEIPFLIVVNKEDLLK--------EKVDELLGVYQQRYGVKTISVSSKLIKGFELIG 161 Query: 204 KAILETI 210 + I E + Sbjct: 162 RKINEIL 168 >gi|148265177|ref|YP_001231883.1| GTP-binding protein EngA [Geobacter uraniireducens Rf4] gi|189037149|sp|A5G692|DER_GEOUR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|146398677|gb|ABQ27310.1| small GTP-binding protein [Geobacter uraniireducens Rf4] Length = 441 Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 28/210 (13%) Query: 5 TIFTKSAWIFLRGVPE-----IGLLPKAGPPE-------IAFSGRSNVGKSSLINILVNR 52 TIFT SA RGV + I LPK + IA GR NVGKS+L+N L+ Sbjct: 140 TIFTVSAE-HNRGVNDLMDEVIKALPKGSAADTDEEVTKIAVIGRPNVGKSTLVNRLLGI 198 Query: 53 KNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL 110 + + + PG T+ +F N K L L+D G + ++ + Sbjct: 199 ERVV-ANPTPGTTRDSIDTYFT----CNRKRYL----LIDTAGIRRKGKTTEKIEKYS-- 247 Query: 111 IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ-- 168 +V L V ++ID GV + D + + + V+ K D L+ A Sbjct: 248 VVDSLRSIERADVVLIVIDAEEGVTEQDTKIAGYAYEAGRGCIFVVNKWDTLTKDNASMG 307 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + +EK + + P A + + +R G Sbjct: 308 KFIEKIRMEFKYLPFAPIVFVSAKTGQRLG 337 Searching..................................................done Results from round 2 >gi|254780484|ref|YP_003064897.1| GTPase EngB [Candidatus Liberibacter asiaticus str. psy62] gi|254040161|gb|ACT56957.1| GTPase EngB [Candidatus Liberibacter asiaticus str. psy62] Length = 212 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 212/212 (100%), Positives = 212/212 (100%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN Sbjct: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST Sbjct: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN Sbjct: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 YPTAHPEVIPTSSVKRKGIEVLRKAILETINY Sbjct: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 >gi|110632739|ref|YP_672947.1| GTPase EngB [Mesorhizobium sp. BNC1] gi|119369212|sp|Q11LE3|ENGB_MESSB RecName: Full=Probable GTP-binding protein EngB gi|110283723|gb|ABG61782.1| GTP-binding protein [Chelativorans sp. BNC1] Length = 225 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 119/205 (58%), Positives = 146/205 (71%), Gaps = 1/205 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + WIF+RGVP + LP GPPE+AF+GRSNVGKSSLIN LV RK LARTSN PGRT Sbjct: 19 LFIR-PWIFIRGVPAMKFLPPEGPPEVAFAGRSNVGKSSLINGLVGRKGLARTSNTPGRT 77 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP+ +S +LP MALVDMPGYG+A+APK VD+W L+ YL R TL+ VY Sbjct: 78 QELNYFVPEGYSGEAGDLPPMALVDMPGYGFAKAPKAQVDAWTKLVFDYLRGRVTLKRVY 137 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K+ID++V LD AVSYQIVLTK DK+ + + +T I P A Sbjct: 138 LLIDARHGIKKIDEEVMDLLDSAAVSYQIVLTKADKIKSPAVTKLVAETGQKIVKRPAAF 197 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PEVI TSS K +G+E LR AI+ + Sbjct: 198 PEVIATSSEKGEGLEELRAAIVHAV 222 >gi|163868926|ref|YP_001610153.1| ribosome biogenesis GTP-binding protein YsxC [Bartonella tribocorum CIP 105476] gi|189037171|sp|A9IXE1|ENGB_BART1 RecName: Full=Probable GTP-binding protein EngB gi|161018600|emb|CAK02158.1| GTP-binding protein [Bartonella tribocorum CIP 105476] Length = 214 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 121/205 (59%), Positives = 151/205 (73%), Gaps = 1/205 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F+++ WIF+RGVP I LP GPPEIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 10 VFSRN-WIFIRGVPAIRFLPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRT 68 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+F+P FS + +LP A+VDMPGYG+A APK VD+W LI YL RSTL+ VY Sbjct: 69 QELNYFIPDGFSGQRGDLPPFAVVDMPGYGFAAAPKNLVDAWTNLIFSYLRGRSTLKRVY 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K D+DV + LDK AVSYQIVLTK DK+ ++ + T+ + +P A+ Sbjct: 129 LLIDSRHGIKNNDEDVLALLDKAAVSYQIVLTKSDKIKSNALEKLIMITQTKLLKHPAAY 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE++ TSS K G+E LR AIL+TI Sbjct: 189 PEILATSSEKAYGLEELRAAILQTI 213 >gi|114706825|ref|ZP_01439725.1| GTP-binding protein [Fulvimarina pelagi HTCC2506] gi|114537773|gb|EAU40897.1| GTP-binding protein [Fulvimarina pelagi HTCC2506] Length = 217 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 112/204 (54%), Positives = 144/204 (70%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 S+ W+F+RGVP + LP GPPE+AF+GRSNVGKSSLIN L+ +K LARTSN P Sbjct: 9 SNPKLFGQPWVFVRGVPAMKFLPPEGPPEVAFAGRSNVGKSSLINALLGQKGLARTSNTP 68 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LNFFVP F LP +A+VDMPGYGYA+APK+ VD+W L+ YL R TL+ Sbjct: 69 GRTQELNFFVPDGFGGETTELPPIAIVDMPGYGYAQAPKEKVDAWTELVFDYLRGRPTLK 128 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 V++LID RHG+K D++V LDK A+SYQIVLTKIDK+ PT + + T+ IR P Sbjct: 129 RVFVLIDARHGIKANDEEVLKLLDKAAMSYQIVLTKIDKIKPTGVPKLIAATEEAIRKRP 188 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAI 206 A+P ++ TSS KR G++ L+ A+ Sbjct: 189 AAYPGILATSSEKRSGLDELQAAL 212 >gi|150395306|ref|YP_001325773.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium medicae WSM419] gi|166225985|sp|A6U5K8|ENGB_SINMW RecName: Full=Probable GTP-binding protein EngB gi|150026821|gb|ABR58938.1| GTP-binding protein HSR1-related [Sinorhizobium medicae WSM419] Length = 217 Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 121/205 (59%), Positives = 147/205 (71%), Gaps = 1/205 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 + ++F + WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV K LARTSN P Sbjct: 9 AASVFGR-PWIFIRGVPSMKFLPPEGPTEIAFAGRSNVGKSSLINALVGHKGLARTSNTP 67 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S ++LP MALVDMPGYGYA+APK+ VD+W L+ YL RSTL+ Sbjct: 68 GRTQELNYFVPDGYSGEADDLPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLK 127 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D++V + LDK AVSYQIVLTK DK+ L +T IR P Sbjct: 128 RVYVLIDARHGIKKNDEEVLALLDKAAVSYQIVLTKTDKIKAAGVPRLLAETLEKIRKRP 187 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAIL 207 A PEV+ TSS K +GIE LR AI Sbjct: 188 AAFPEVLSTSSEKGEGIEELRAAIE 212 >gi|218461047|ref|ZP_03501138.1| GTPase EngB [Rhizobium etli Kim 5] Length = 217 Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats. Identities = 117/209 (55%), Positives = 147/209 (70%), Gaps = 1/209 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN P Sbjct: 5 EKPLF-GHPWIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTP 63 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ Sbjct: 64 GRTQELNYFVPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLK 123 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D+DV + LDK AVSYQ+VLTK DK+ + L +T IR P Sbjct: 124 RVYVLIDSRHGIKKNDEDVLTLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRP 183 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETIN 211 A+P V+ TSS K G++ LR+AI ET+ Sbjct: 184 AAYPFVLSTSSEKGDGLDDLRQAIAETVG 212 >gi|190890107|ref|YP_001976649.1| GTP-binding protein [Rhizobium etli CIAT 652] gi|238692551|sp|B3Q039|ENGB_RHIE6 RecName: Full=Probable GTP-binding protein EngB gi|190695386|gb|ACE89471.1| GTP-binding protein [Rhizobium etli CIAT 652] Length = 217 Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 116/209 (55%), Positives = 147/209 (70%), Gaps = 1/209 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN P Sbjct: 5 EKPLF-GHPWIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTP 63 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ Sbjct: 64 GRTQELNYFVPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLK 123 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D+DV + LDK AVSYQ+VLTK DK+ + L +T IR P Sbjct: 124 RVYVLIDSRHGIKKNDEDVLTLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRP 183 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETIN 211 A+P V+ TSS K G++ LR+AI +T+ Sbjct: 184 AAYPAVLSTSSEKGDGLDDLRQAIAQTVG 212 >gi|327192536|gb|EGE59488.1| GTP-binding protein [Rhizobium etli CNPAF512] Length = 217 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 116/209 (55%), Positives = 147/209 (70%), Gaps = 1/209 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN P Sbjct: 5 EKPLF-GHPWIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTP 63 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ Sbjct: 64 GRTQELNYFVPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLK 123 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D+DV + LDK AVSYQ+VLTK DK+ + L +T IR P Sbjct: 124 RVYVLIDSRHGIKKNDEDVLTLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRP 183 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETIN 211 A+P V+ TSS K G++ LR+AI +T+ Sbjct: 184 AAYPAVLSTSSEKGDGLDDLRQAIAQTVG 212 >gi|23500747|ref|NP_700187.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis 1330] gi|62317853|ref|YP_223706.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 1 str. 9-941] gi|83269832|ref|YP_419123.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis biovar Abortus 2308] gi|148558302|ref|YP_001257935.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ovis ATCC 25840] gi|163845138|ref|YP_001622793.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis ATCC 23445] gi|225629473|ref|ZP_03787506.1| GTP-binding conserved hypothetical protein [Brucella ceti str. Cudo] gi|237817393|ref|ZP_04596385.1| GTP-binding conserved hypothetical protein [Brucella abortus str. 2308 A] gi|256015783|ref|YP_003105792.1| GTP-binding protein [Brucella microti CCM 4915] gi|297249211|ref|ZP_06932912.1| GTP-binding protein [Brucella abortus bv. 5 str. B3196] gi|23464401|gb|AAN34192.1| GTP-binding protein, putative [Brucella suis 1330] gi|62198046|gb|AAX76345.1| hypothetical GTP-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82940106|emb|CAJ13153.1| ATP/GTP-binding site motif A (P-loop):GTP-binding domain [Brucella melitensis biovar Abortus 2308] gi|148369587|gb|ABQ62459.1| putative GTP-binding protein [Brucella ovis ATCC 25840] gi|163675861|gb|ABY39971.1| GTP-binding conserved hypothetical protein [Brucella suis ATCC 23445] gi|225615969|gb|EEH13018.1| GTP-binding conserved hypothetical protein [Brucella ceti str. Cudo] gi|237788206|gb|EEP62422.1| GTP-binding conserved hypothetical protein [Brucella abortus str. 2308 A] gi|255998443|gb|ACU50130.1| GTP-binding protein [Brucella microti CCM 4915] gi|297173080|gb|EFH32444.1| GTP-binding protein [Brucella abortus bv. 5 str. B3196] Length = 267 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 115/202 (56%), Positives = 140/202 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 60 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 119 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 120 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 180 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 239 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K +G++ LR AI Sbjct: 240 PGIIATSSEKGQGLDDLRAAIA 261 >gi|218515056|ref|ZP_03511896.1| GTPase EngB [Rhizobium etli 8C-3] Length = 217 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 116/209 (55%), Positives = 148/209 (70%), Gaps = 1/209 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN P Sbjct: 5 EKPLF-GHPWIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTP 63 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ Sbjct: 64 GRTQELNYFVPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLK 123 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D+DV + LDK AVSYQ+VLTK DK++ + L +T IR P Sbjct: 124 RVYVLIDSRHGIKKNDEDVLTLLDKAAVSYQLVLTKTDKITAPAVPKLLAETADKIRKRP 183 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETIN 211 A+P V+ TSS K G++ LR+AI +T+ Sbjct: 184 AAYPAVLSTSSEKGDGLDDLRQAIAQTVG 212 >gi|90419895|ref|ZP_01227804.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90335936|gb|EAS49684.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 226 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 110/201 (54%), Positives = 141/201 (70%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F W+F+RGVP + LP GPPEIAF+GRSNVGKSSLIN L+ +K LARTSN PGRTQ Sbjct: 22 FFGQPWVFVRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALLAQKGLARTSNTPGRTQ 81 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNFFVP + LP +A+VDMPGYGYA+APK +VD+W L+ YL R++L+ V+L Sbjct: 82 ELNFFVPDGYGGETAELPPIAVVDMPGYGYAKAPKDHVDAWTKLVFSYLRGRASLKRVFL 141 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID RHG+K+ D++V LDK AVSYQIVLTK DK+ T + +E T I+ +P A P Sbjct: 142 LIDARHGIKKNDEEVMGLLDKAAVSYQIVLTKTDKIKATGVPKLIEATALGIKRHPAAFP 201 Query: 187 EVIPTSSVKRKGIEVLRKAIL 207 ++ TSS K G++ L+ I Sbjct: 202 RILSTSSEKGVGLDELKAEIA 222 >gi|239832646|ref|ZP_04680975.1| GTP-binding conserved hypothetical protein [Ochrobactrum intermedium LMG 3301] gi|239824913|gb|EEQ96481.1| GTP-binding conserved hypothetical protein [Ochrobactrum intermedium LMG 3301] Length = 268 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 117/205 (57%), Positives = 141/205 (68%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LVN+K LARTSN PGRT Sbjct: 60 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVNKKGLARTSNTPGRT 119 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 120 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 180 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 239 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 P +I TSS K G++ LR AI I Sbjct: 240 PGIIATSSEKGVGLDELRAAIARLI 264 >gi|49475955|ref|YP_033996.1| GTPase EngB [Bartonella henselae str. Houston-1] gi|81647688|sp|Q6G2G5|ENGB_BARHE RecName: Full=Probable GTP-binding protein EngB gi|49238763|emb|CAF28024.1| GTP-binding protein cgpa [Bartonella henselae str. Houston-1] Length = 215 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 118/201 (58%), Positives = 147/201 (73%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W+F+RGVP I LP GPPEIAF+GRSNVGKSSLIN LV +K+LARTSN PGRTQ LN Sbjct: 13 HNWVFIRGVPTIRFLPPEGPPEIAFAGRSNVGKSSLINALVRQKSLARTSNMPGRTQELN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +FVP FS +LP +ALVDMPGYG+A+APK VD+W LI YL R+TL+ VY+LID Sbjct: 73 YFVPDGFSGRPEDLPPIALVDMPGYGFAKAPKNLVDAWTDLIYSYLRGRTTLKRVYVLID 132 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K+ D ++ LDK AVSYQIVLTK DK+ + ++ + TK + P A+PE++ Sbjct: 133 SRHGIKKNDAEILELLDKAAVSYQIVLTKSDKIKSSVLEQRIITTKTKLLKRPAAYPEIL 192 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS K G+E LR AIL+TI Sbjct: 193 ATSSEKAFGLEELRAAILQTI 213 >gi|161621072|ref|YP_001594958.1| GTPase EngB [Brucella canis ATCC 23365] gi|161337883|gb|ABX64187.1| GTP-binding conserved hypothetical protein [Brucella canis ATCC 23365] Length = 267 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 115/202 (56%), Positives = 141/202 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 60 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 119 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S+ +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 120 QELNYFVPDGYSSENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 180 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 239 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K +G++ LR AI Sbjct: 240 PGIIATSSEKGQGLDDLRAAIA 261 >gi|222147368|ref|YP_002548325.1| ribosome biogenesis GTP-binding protein YsxC [Agrobacterium vitis S4] gi|254783181|sp|B9JZK9|ENGB_AGRVS RecName: Full=Probable GTP-binding protein EngB gi|221734358|gb|ACM35321.1| GTP-binding protein [Agrobacterium vitis S4] Length = 219 Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats. Identities = 121/209 (57%), Positives = 151/209 (72%), Gaps = 1/209 (0%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 +F + WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PG Sbjct: 10 QPLFGR-PWIFIRGVPSMKFLPPEGPLEIAFAGRSNVGKSSLINALVGQKGLARTSNTPG 68 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ LN+FVP+ +S ++LP MALVDMPGYGYA+APK +VD+W L+ YL R+TL+ Sbjct: 69 RTQELNYFVPEGYSGEGDDLPPMALVDMPGYGYAKAPKDHVDAWTKLVFDYLRGRATLKR 128 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 VYLLID RHG+K D+DV + LDK A+SYQIVLTK DK+ +E+T IR P Sbjct: 129 VYLLIDSRHGIKANDEDVLTLLDKAAMSYQIVLTKTDKIKEAGVPRLIEETLEKIRKRPA 188 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETINY 212 A+P V+ TSS K KG++ LR AI ET+ + Sbjct: 189 AYPFVLSTSSEKDKGLKELRAAICETVGH 217 >gi|225686779|ref|YP_002734751.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis ATCC 23457] gi|225642884|gb|ACO02797.1| GTP-binding conserved hypothetical protein [Brucella melitensis ATCC 23457] Length = 267 Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats. Identities = 115/202 (56%), Positives = 140/202 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 60 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 119 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 120 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKVQVDAWTRLVFDYLRGRTTLKRVY 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 180 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 239 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K +G++ LR AI Sbjct: 240 PGIIATSSEKGQGLDDLRAAIA 261 >gi|294853977|ref|ZP_06794649.1| GTP-binding protein [Brucella sp. NVSL 07-0026] gi|294819632|gb|EFG36632.1| GTP-binding protein [Brucella sp. NVSL 07-0026] Length = 267 Score = 273 bits (700), Expect = 8e-72, Method: Composition-based stats. Identities = 114/202 (56%), Positives = 139/202 (68%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 60 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 119 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGY +A APK VD+W L+ YL R+TL+ VY Sbjct: 120 QELNYFVPDGYSGENGDLPPLALVDMPGYSFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 180 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 239 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K +G++ LR AI Sbjct: 240 PGIIATSSEKGQGLDDLRAAIA 261 >gi|319406773|emb|CBI80406.1| GTP-binding protein [Bartonella sp. 1-1C] Length = 213 Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats. Identities = 116/205 (56%), Positives = 150/205 (73%), Gaps = 1/205 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F ++ WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV +KNLARTSN PGRT Sbjct: 9 LFVRN-WIFIRGVPTMKFLPPEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRT 67 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+F+P F+ +NLP +A VDMPGYG+A+APK V++W LI YL R+TL+ VY Sbjct: 68 QELNYFIPDGFNEQTHNLPPVAFVDMPGYGFAKAPKNLVNAWTHLIFDYLRGRTTLKRVY 127 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D D + LDK AVSYQIVLTK DK+ T + + TK + +P A+ Sbjct: 128 VLIDSRHGIKKNDTDTLNLLDKAAVSYQIVLTKSDKIKFNTLEALITMTKTKLLKHPAAY 187 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE++ TS+ K G+E LR AI++ I Sbjct: 188 PEILVTSAEKASGLEELRAAIIQAI 212 >gi|15964196|ref|NP_384549.1| GTPase EngB [Sinorhizobium meliloti 1021] gi|307301340|ref|ZP_07581102.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium meliloti BL225C] gi|307318010|ref|ZP_07597447.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium meliloti AK83] gi|24418387|sp|Q92SF6|ENGB_RHIME RecName: Full=Probable GTP-binding protein EngB gi|15073372|emb|CAC41880.1| Hypothetical GTP-binding protein [Sinorhizobium meliloti 1021] gi|306896412|gb|EFN27161.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium meliloti AK83] gi|306903796|gb|EFN34383.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium meliloti BL225C] Length = 217 Score = 273 bits (699), Expect = 9e-72, Method: Composition-based stats. Identities = 120/205 (58%), Positives = 146/205 (71%), Gaps = 1/205 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 + ++F + WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV K LARTSN P Sbjct: 9 AASVFGR-PWIFIRGVPSMKFLPPEGPTEIAFAGRSNVGKSSLINALVGHKGLARTSNTP 67 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S +LP MALVDMPGYGYA+APK+ VD+W L+ YL RSTL+ Sbjct: 68 GRTQELNYFVPDGYSGEAGDLPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLK 127 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D+DV + LDK AVSYQIVLTK DK+ + +T I+ P Sbjct: 128 RVYVLIDARHGIKKNDEDVLALLDKAAVSYQIVLTKTDKIKAAGVPRLVAETLEKIKKRP 187 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAIL 207 A PEV+ TSS K +GIE LR AI Sbjct: 188 AAFPEVLSTSSEKGEGIEDLRAAIE 212 >gi|240850502|ref|YP_002971901.1| GTP-ase EngB [Bartonella grahamii as4aup] gi|240267625|gb|ACS51213.1| GTP-ase EngB [Bartonella grahamii as4aup] Length = 214 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 123/205 (60%), Positives = 151/205 (73%), Gaps = 1/205 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 IF+++ WIF+RGVP I LP GPPEIAF+GRSNVGKSSLIN LV +K+LARTSN PGRT Sbjct: 10 IFSRN-WIFIRGVPAIRFLPPEGPPEIAFAGRSNVGKSSLINALVQQKSLARTSNTPGRT 68 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP FS +LP +ALVDMPGYG+A APK VD+W LI YL R+TL+ VY Sbjct: 69 QELNYFVPDGFSGQLGDLPPLALVDMPGYGFAAAPKNLVDAWTNLIFSYLRGRTTLKRVY 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K D+DV S LDK AVSYQIVLTK DK+ ++ + T+ + P A+ Sbjct: 129 ILIDSRHGIKNNDEDVLSLLDKAAVSYQIVLTKSDKIKSNALEKLIMSTQTKLLKRPAAY 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE++ TSS K G+E LR AIL+TI Sbjct: 189 PELLVTSSEKALGLEELRAAILQTI 213 >gi|15887733|ref|NP_353414.1| GTPase EngB [Agrobacterium tumefaciens str. C58] gi|24418376|sp|Q8UIB4|ENGB_AGRT5 RecName: Full=Probable GTP-binding protein EngB gi|15155296|gb|AAK86199.1| GTP-binding protein [Agrobacterium tumefaciens str. C58] Length = 217 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 118/208 (56%), Positives = 148/208 (71%), Gaps = 1/208 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F + WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV K LARTSN P Sbjct: 9 EKPLFGR-PWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTP 67 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP+ +S +LP MALVDMPGYGYA+APK +VD+W L+ YL R+TL+ Sbjct: 68 GRTQELNYFVPEGYSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLK 127 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D++V S LDK AVSYQ+VLTK DK+ + +T IR P Sbjct: 128 RVYVLIDSRHGIKKNDEEVLSLLDKAAVSYQVVLTKTDKIKDVGVPRLIGETLEKIRKRP 187 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETI 210 A+PEV+ TSS K G++ LR I+ T+ Sbjct: 188 AAYPEVLATSSEKSFGLDDLRAEIVRTV 215 >gi|13474032|ref|NP_105600.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium loti MAFF303099] gi|24418390|sp|Q98D85|ENGB_RHILO RecName: Full=Probable GTP-binding protein EngB gi|14024784|dbj|BAB51386.1| GTP-binding protein [Mesorhizobium loti MAFF303099] Length = 212 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 122/207 (58%), Positives = 147/207 (71%), Gaps = 1/207 (0%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M++ +FT+ WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LVN+K LARTSN Sbjct: 1 MITTDLFTRG-WIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSN 59 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ LN+FVP FS +LP MALVDMPGYGYA APK+ VD W L+ YL R T Sbjct: 60 TPGRTQELNYFVPDGFSGEGADLPPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVT 119 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ VY+LID RHG+K D +V S LDK AVSYQIVLTK DK+ +E+T I+ Sbjct: 120 LKRVYVLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDKIKVAGVPRLIEETLQKIKK 179 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 P A P V+ TSS K +G+E L+ AI+ Sbjct: 180 RPAAFPFVLATSSEKGEGLEELQAAIV 206 >gi|325291816|ref|YP_004277680.1| ribosome biogenesis GTP-binding protein YsxC [Agrobacterium sp. H13-3] gi|325059669|gb|ADY63360.1| ribosome biogenesis GTP-binding protein YsxC [Agrobacterium sp. H13-3] Length = 217 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 117/208 (56%), Positives = 147/208 (70%), Gaps = 1/208 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F + WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV K LARTSN P Sbjct: 9 EKPLFGR-PWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTP 67 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP+ +S +LP MALVDMPGYGYA+APK +VD+W L+ YL R+TL+ Sbjct: 68 GRTQELNYFVPEGYSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLK 127 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D++V LDK AVSYQ+VLTK DK+ + +T IR P Sbjct: 128 RVYVLIDSRHGIKKNDEEVLGLLDKAAVSYQVVLTKTDKIKDVGVPRLISETLEKIRKRP 187 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETI 210 A+PEV+ TSS K G++ LR I+ T+ Sbjct: 188 AAYPEVLATSSEKSFGLDSLRAEIVRTV 215 >gi|163757862|ref|ZP_02164951.1| GTPase EngB [Hoeflea phototrophica DFL-43] gi|162285364|gb|EDQ35646.1| GTPase EngB [Hoeflea phototrophica DFL-43] Length = 225 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 118/209 (56%), Positives = 149/209 (71%), Gaps = 1/209 (0%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S T+F K W+F+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV K LARTSN Sbjct: 16 LSATLFAK-PWVFIRGVPSLKFLPPEGPPEIAFAGRSNVGKSSLINALVGAKGLARTSNT 74 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ LN+FVP +S +++LP MALVDMPGYGYA+APK+ VD W L+ Y+ RSTL Sbjct: 75 PGRTQELNYFVPGGYSGAEDDLPPMALVDMPGYGYAKAPKEQVDLWTKLVFDYMRGRSTL 134 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + VYLLID RHG+K+ D++V LDK A+SYQ+VLTK DK+ + +T ++ Sbjct: 135 KRVYLLIDSRHGIKKNDEEVMDLLDKAAMSYQVVLTKTDKIKEAGVPRLIGETLNKLKRR 194 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETI 210 P A+PEV+ TSS K G++ LR AI I Sbjct: 195 PAAYPEVLATSSEKANGVDDLRIAIALAI 223 >gi|227820667|ref|YP_002824637.1| ribosome biogenesis GTP-binding protein YsxC [Sinorhizobium fredii NGR234] gi|254783206|sp|C3MF47|ENGB_RHISN RecName: Full=Probable GTP-binding protein EngB gi|227339666|gb|ACP23884.1| predicted GTP-binding protein EngB-related [Sinorhizobium fredii NGR234] Length = 217 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 118/207 (57%), Positives = 146/207 (70%), Gaps = 1/207 (0%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 +F + WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV K LARTSN PG Sbjct: 10 KPLFGR-PWIFIRGVPSMKFLPPEGPAEIAFAGRSNVGKSSLINALVGHKGLARTSNTPG 68 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ LN+FVP +S ++LP MALVDMPGYGYA+APK+ VD+W L+ YL RSTL+ Sbjct: 69 RTQELNYFVPDGYSGEADDLPPMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLKR 128 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 VY+LID RHG+K+ D++V + LDK AVSYQIVLTK DK+ + +T I+ P Sbjct: 129 VYVLIDARHGIKKNDEEVLALLDKAAVSYQIVLTKTDKIKAAGVPRLIAETLDKIKKRPA 188 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETI 210 A+PEV+ TSS K GIE LR I + + Sbjct: 189 AYPEVLSTSSEKGAGIEDLRITIEQAV 215 >gi|17988618|ref|NP_541251.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis bv. 1 str. 16M] gi|189023103|ref|YP_001932844.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus S19] gi|254690661|ref|ZP_05153915.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 6 str. 870] gi|254696034|ref|ZP_05157862.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 3 str. Tulya] gi|254699143|ref|ZP_05160971.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 2 str. 86/8/59] gi|254700219|ref|ZP_05162047.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis bv. 5 str. 513] gi|254703340|ref|ZP_05165168.1| ribosome biogenesis GTP-binding protein YsxC [Brucella suis bv. 3 str. 686] gi|254705519|ref|ZP_05167347.1| ribosome biogenesis GTP-binding protein YsxC [Brucella pinnipedialis M163/99/10] gi|254710750|ref|ZP_05172561.1| ribosome biogenesis GTP-binding protein YsxC [Brucella pinnipedialis B2/94] gi|254720148|ref|ZP_05181959.1| ribosome biogenesis GTP-binding protein YsxC [Brucella sp. 83/13] gi|254732587|ref|ZP_05191165.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 4 str. 292] gi|256029133|ref|ZP_05442747.1| ribosome biogenesis GTP-binding protein YsxC [Brucella pinnipedialis M292/94/1] gi|256043892|ref|ZP_05446812.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis bv. 1 str. Rev.1] gi|256058816|ref|ZP_05449032.1| ribosome biogenesis GTP-binding protein YsxC [Brucella neotomae 5K33] gi|256157325|ref|ZP_05455243.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ceti M490/95/1] gi|256253697|ref|ZP_05459233.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ceti B1/94] gi|256255843|ref|ZP_05461379.1| ribosome biogenesis GTP-binding protein YsxC [Brucella abortus bv. 9 str. C68] gi|260167775|ref|ZP_05754586.1| ribosome biogenesis GTP-binding protein YsxC [Brucella sp. F5/99] gi|260545088|ref|ZP_05820909.1| ATP/GTP-binding site-containing protein A [Brucella abortus NCTC 8038] gi|260565069|ref|ZP_05835554.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv. 1 str. 16M] gi|260756232|ref|ZP_05868580.1| GTPase EngB [Brucella abortus bv. 6 str. 870] gi|260760399|ref|ZP_05872747.1| GTPase EngB [Brucella abortus bv. 4 str. 292] gi|260763639|ref|ZP_05875971.1| GTPase EngB [Brucella abortus bv. 2 str. 86/8/59] gi|260882056|ref|ZP_05893670.1| GTPase EngB [Brucella abortus bv. 9 str. C68] gi|261216466|ref|ZP_05930747.1| GTPase EngB [Brucella abortus bv. 3 str. Tulya] gi|261220834|ref|ZP_05935115.1| GTPase EngB [Brucella ceti B1/94] gi|261312923|ref|ZP_05952120.1| GTPase EngB [Brucella pinnipedialis M163/99/10] gi|261318318|ref|ZP_05957515.1| GTPase EngB [Brucella pinnipedialis B2/94] gi|261322753|ref|ZP_05961950.1| GTPase EngB [Brucella neotomae 5K33] gi|261750714|ref|ZP_05994423.1| GTPase EngB [Brucella suis bv. 5 str. 513] gi|261753970|ref|ZP_05997679.1| GTPase EngB [Brucella suis bv. 3 str. 686] gi|261757212|ref|ZP_06000921.1| conserved hypothetical protein [Brucella sp. F5/99] gi|265985154|ref|ZP_06097889.1| GTPase EngB [Brucella sp. 83/13] gi|265986116|ref|ZP_06098673.1| GTPase EngB [Brucella pinnipedialis M292/94/1] gi|265990315|ref|ZP_06102872.1| GTPase EngB [Brucella melitensis bv. 1 str. Rev.1] gi|265995810|ref|ZP_06108367.1| GTPase EngB [Brucella ceti M490/95/1] gi|306839546|ref|ZP_07472353.1| GTP-binding conserved hypothetical protein [Brucella sp. NF 2653] gi|306840614|ref|ZP_07473367.1| GTP-binding conserved hypothetical protein [Brucella sp. BO2] gi|306846226|ref|ZP_07478788.1| GTP-binding conserved hypothetical protein [Brucella sp. BO1] gi|54037055|sp|P64067|ENGB_BRUSU RecName: Full=Probable GTP-binding protein EngB gi|54040978|sp|P64066|ENGB_BRUME RecName: Full=Probable GTP-binding protein EngB gi|119368793|sp|Q2YJR1|ENGB_BRUA2 RecName: Full=Probable GTP-binding protein EngB gi|119368794|sp|Q576T9|ENGB_BRUAB RecName: Full=Probable GTP-binding protein EngB gi|17984421|gb|AAL53515.1| gtp-binding protein cgpa [Brucella melitensis bv. 1 str. 16M] gi|189021677|gb|ACD74398.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19] gi|260098359|gb|EEW82233.1| ATP/GTP-binding site-containing protein A [Brucella abortus NCTC 8038] gi|260152712|gb|EEW87805.1| ATP/GTP-binding site-containing protein A [Brucella melitensis bv. 1 str. 16M] gi|260670717|gb|EEX57657.1| GTPase EngB [Brucella abortus bv. 4 str. 292] gi|260674060|gb|EEX60881.1| GTPase EngB [Brucella abortus bv. 2 str. 86/8/59] gi|260676340|gb|EEX63161.1| GTPase EngB [Brucella abortus bv. 6 str. 870] gi|260871584|gb|EEX78653.1| GTPase EngB [Brucella abortus bv. 9 str. C68] gi|260918073|gb|EEX84934.1| GTPase EngB [Brucella abortus bv. 3 str. Tulya] gi|260919418|gb|EEX86071.1| GTPase EngB [Brucella ceti B1/94] gi|261297541|gb|EEY01038.1| GTPase EngB [Brucella pinnipedialis B2/94] gi|261298733|gb|EEY02230.1| GTPase EngB [Brucella neotomae 5K33] gi|261301949|gb|EEY05446.1| GTPase EngB [Brucella pinnipedialis M163/99/10] gi|261737196|gb|EEY25192.1| conserved hypothetical protein [Brucella sp. F5/99] gi|261740467|gb|EEY28393.1| GTPase EngB [Brucella suis bv. 5 str. 513] gi|261743723|gb|EEY31649.1| GTPase EngB [Brucella suis bv. 3 str. 686] gi|262550107|gb|EEZ06268.1| GTPase EngB [Brucella ceti M490/95/1] gi|263000984|gb|EEZ13674.1| GTPase EngB [Brucella melitensis bv. 1 str. Rev.1] gi|264658313|gb|EEZ28574.1| GTPase EngB [Brucella pinnipedialis M292/94/1] gi|264663746|gb|EEZ34007.1| GTPase EngB [Brucella sp. 83/13] gi|306273477|gb|EFM55338.1| GTP-binding conserved hypothetical protein [Brucella sp. BO1] gi|306289399|gb|EFM60633.1| GTP-binding conserved hypothetical protein [Brucella sp. BO2] gi|306405378|gb|EFM61650.1| GTP-binding conserved hypothetical protein [Brucella sp. NF 2653] Length = 241 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 115/202 (56%), Positives = 140/202 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGQGLDDLRAAIA 235 >gi|222084725|ref|YP_002543254.1| GTP-binding protein [Agrobacterium radiobacter K84] gi|254783180|sp|B9J8E2|ENGB_AGRRK RecName: Full=Probable GTP-binding protein EngB gi|221722173|gb|ACM25329.1| GTP-binding protein [Agrobacterium radiobacter K84] Length = 219 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 116/203 (57%), Positives = 143/203 (70%), Gaps = 1/203 (0%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 +F + WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV K LARTSN PG Sbjct: 10 KPLFGR-PWIFIRGVPAMKFLPPEGPLEVAFAGRSNVGKSSLINALVGHKGLARTSNTPG 68 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ LN+FVP FS +LP MALVDMPGYGYA APK+ VD+W L+ YL R+TL+ Sbjct: 69 RTQELNYFVPDGFSGEGGDLPPMALVDMPGYGYAEAPKEQVDAWTKLVFDYLRGRTTLKR 128 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 VY+LID RHG+K+ D++V + LDK AVSYQIVLTK DK+ + L T IR P Sbjct: 129 VYVLIDSRHGIKKNDEEVLALLDKAAVSYQIVLTKTDKIKEAGLPKLLADTAEKIRKRPA 188 Query: 184 AHPEVIPTSSVKRKGIEVLRKAI 206 A+P ++ TSS K G+E +R+AI Sbjct: 189 AYPGILSTSSEKGDGLEEVRQAI 211 >gi|256111043|ref|ZP_05452105.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis bv. 3 str. Ether] gi|265992578|ref|ZP_06105135.1| GTPase EngB [Brucella melitensis bv. 3 str. Ether] gi|262763448|gb|EEZ09480.1| GTPase EngB [Brucella melitensis bv. 3 str. Ether] Length = 241 Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 115/202 (56%), Positives = 140/202 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSGKNGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGQGLDDLRAAIA 235 >gi|153008691|ref|YP_001369906.1| ribosome biogenesis GTP-binding protein YsxC [Ochrobactrum anthropi ATCC 49188] gi|151560579|gb|ABS14077.1| GTP-binding protein HSR1-related [Ochrobactrum anthropi ATCC 49188] Length = 241 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 116/202 (57%), Positives = 141/202 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LVN+K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVNKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGEGLDELRAAIA 235 >gi|260567730|ref|ZP_05838199.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str. 40] gi|260154395|gb|EEW89476.1| ATP/GTP-binding site-containing protein A [Brucella suis bv. 4 str. 40] Length = 241 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 115/202 (56%), Positives = 141/202 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S+ +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSSENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGQGLDDLRAAIA 235 >gi|49474532|ref|YP_032574.1| GTPase EngB [Bartonella quintana str. Toulouse] gi|81646890|sp|Q6FZ15|ENGB_BARQU RecName: Full=Probable GTP-binding protein EngB gi|49240036|emb|CAF26455.1| GTP-binding protein cgpA [Bartonella quintana str. Toulouse] Length = 215 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 122/205 (59%), Positives = 147/205 (71%), Gaps = 1/205 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 IF++ WIF+RG+P I LP GPPEIAF+GRSNVGKSSLIN LV +K+LARTSN PGRT Sbjct: 10 IFSR-KWIFIRGIPTIHFLPPEGPPEIAFAGRSNVGKSSLINALVQQKSLARTSNTPGRT 68 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP FS NLP +ALVDMPGYG+A APK VD+W LI YL R+TL+ VY Sbjct: 69 QELNYFVPDGFSGEPGNLPPIALVDMPGYGFAEAPKNLVDAWTHLIFSYLRGRTTLKRVY 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D DV LDK AVSYQIVLTK DK + + TK + +P A+ Sbjct: 129 VLIDSRHGIKKNDGDVLDLLDKAAVSYQIVLTKSDKTKSNELAKLIMITKTKLLKHPAAY 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE++ TSS K G+E LR AIL+ I Sbjct: 189 PELLVTSSEKALGLEELRAAILQAI 213 >gi|256262087|ref|ZP_05464619.1| ATP/GTP-binding site domain-containing protein A [Brucella melitensis bv. 2 str. 63/9] gi|263091776|gb|EEZ16107.1| ATP/GTP-binding site domain-containing protein A [Brucella melitensis bv. 2 str. 63/9] gi|326411187|gb|ADZ68251.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis M28] gi|326554478|gb|ADZ89117.1| ribosome biogenesis GTP-binding protein YsxC [Brucella melitensis M5-90] Length = 241 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 115/202 (56%), Positives = 140/202 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKVQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTKIDK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKIDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGQGLDDLRAAIA 235 >gi|254712780|ref|ZP_05174591.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ceti M644/93/1] gi|254715849|ref|ZP_05177660.1| ribosome biogenesis GTP-binding protein YsxC [Brucella ceti M13/05/1] gi|261217610|ref|ZP_05931891.1| GTPase EngB [Brucella ceti M13/05/1] gi|261320487|ref|ZP_05959684.1| GTPase EngB [Brucella ceti M644/93/1] gi|260922699|gb|EEX89267.1| GTPase EngB [Brucella ceti M13/05/1] gi|261293177|gb|EEX96673.1| GTPase EngB [Brucella ceti M644/93/1] Length = 241 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 114/202 (56%), Positives = 140/202 (69%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + K +WIF+RGVP + LP GP EIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 34 LLFKKSWIFIRGVPSMKFLPPEGPVEIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRT 93 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP +S +LP +ALVDMPGYG+A APK VD+W L+ YL R+TL+ VY Sbjct: 94 QELNYFVPDGYSGENGDLPPLALVDMPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVY 153 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D +V LDK AVSYQIVLTK+DK+ P LE+T L Sbjct: 154 VLIDARHGIKKNDAEVLDLLDKAAVSYQIVLTKLDKIKPAGVPRLLEETHKLTYKRAACF 213 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K +G++ LR AI Sbjct: 214 PGIIATSSEKGQGLDDLRAAIA 235 >gi|121602307|ref|YP_989324.1| GTPase EngB [Bartonella bacilliformis KC583] gi|166225944|sp|A1UTM1|ENGB_BARBK RecName: Full=Probable GTP-binding protein EngB gi|120614484|gb|ABM45085.1| GTP-binding protein [Bartonella bacilliformis KC583] Length = 215 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 117/205 (57%), Positives = 148/205 (72%), Gaps = 1/205 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 IF ++ WIF+RGVP I LP GPPEIAF+GRSNVGKSSLIN LV +K LARTSN PGRT Sbjct: 10 IFFRN-WIFIRGVPTIQFLPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRT 68 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP FS K + P MALVDMPGYG+A+APK VD+W L+ YL R+TL+ VY Sbjct: 69 QELNYFVPDGFSGSKEDFPPMALVDMPGYGFAQAPKNLVDAWTHLVFNYLRGRTTLKRVY 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D++V LDK AVSYQI+LTK DK+ + + T+ + P A+ Sbjct: 129 ILIDSRHGIKKNDEEVLDLLDKAAVSYQIILTKSDKIKSNMLENLMTTTQMSLLKRPAAY 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE++ TS+ K G+E LR AIL+ + Sbjct: 189 PELLTTSAEKALGLEELRTAILQAV 213 >gi|260461154|ref|ZP_05809403.1| GTP-binding protein HSR1-related protein [Mesorhizobium opportunistum WSM2075] gi|259033188|gb|EEW34450.1| GTP-binding protein HSR1-related protein [Mesorhizobium opportunistum WSM2075] Length = 219 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 121/202 (59%), Positives = 144/202 (71%), Gaps = 1/202 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +FT+ WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LVN+K LARTSN PGRT Sbjct: 13 LFTRG-WIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSNTPGRT 71 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+FVP FS +LP MALVDMPGYGYA APK+ VD W L+ YL R TL+ VY Sbjct: 72 QELNYFVPDGFSGEGADLPPMALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVTLKRVY 131 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K D +V S LDK AVSYQIVLTK DK+ +E+T I+ P A Sbjct: 132 VLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDKIKVAGVPRLIEETLAKIKKRPAAF 191 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P V+ TSS K +G+E L+ AI+ Sbjct: 192 PFVLATSSEKGEGLEELQAAIV 213 >gi|315122060|ref|YP_004062549.1| GTPase EngB [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495462|gb|ADR52061.1| GTPase EngB [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 192 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 143/192 (74%), Positives = 167/192 (86%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + LLP+ GPPEIAFSGRSNVGKSSLIN+L+NRKNLARTSN+PGRTQ +NFF+P D S K Sbjct: 1 MRLLPEEGPPEIAFSGRSNVGKSSLINMLLNRKNLARTSNSPGRTQEINFFIPSDCSGRK 60 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +NLP M LVDMPGYGYA+APKKNV +WG L+VRYL ERSTLRCVYLLIDCRHG+K+IDQD Sbjct: 61 DNLPTMTLVDMPGYGYAKAPKKNVAAWGNLVVRYLRERSTLRCVYLLIDCRHGIKKIDQD 120 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 VF+ LDK+AVSYQ++LTK DKLSP AQE LE TK L++N+P AH +VI TSS+K GIE Sbjct: 121 VFALLDKEAVSYQVILTKADKLSPAMAQEKLENTKSLLQNHPAAHSDVILTSSIKGNGIE 180 Query: 201 VLRKAILETINY 212 +LRK+ILETI Y Sbjct: 181 MLRKSILETIIY 192 >gi|319405205|emb|CBI78810.1| GTP-binding protein [Bartonella sp. AR 15-3] Length = 214 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 114/205 (55%), Positives = 149/205 (72%), Gaps = 1/205 (0%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F ++ WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV +KNLARTSN PGRT Sbjct: 10 LFVRN-WIFIRGVPTMKFLPPEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRT 68 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LN+F+P F+ ++LP +ALVDMPGYG+A APK +++W LI YL R+TL+ VY Sbjct: 69 QELNYFIPDGFNGQTHHLPPVALVDMPGYGFAEAPKNLINAWTHLIFDYLRGRTTLKRVY 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K+ D D + LDK AVSYQIVLTK DK+ T + + TK + + A+ Sbjct: 129 VLIDSRHGIKKNDTDTLNLLDKAAVSYQIVLTKSDKIKLNTLEALIIMTKTKLLKHSAAY 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE++ TS+ K G+E LR AI++ I Sbjct: 189 PEILVTSAEKASGLEELRTAIIQAI 213 >gi|319780375|ref|YP_004139851.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166263|gb|ADV09801.1| ribosome biogenesis GTP-binding protein YsxC [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 219 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 120/207 (57%), Positives = 146/207 (70%), Gaps = 1/207 (0%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 ++ +FT+ WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LVN+K LARTSN Sbjct: 8 IIGTELFTRG-WIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVNQKGLARTSN 66 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ LN+FVP FS +LP +ALVDMPGYGYA APK+ VD W L+ YL R T Sbjct: 67 TPGRTQELNYFVPDGFSGEGADLPPLALVDMPGYGYATAPKEKVDEWTKLVFDYLKGRVT 126 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ VY+LID RHG+K D +V S LDK AVSYQIVLTK DK+ +E+T I+ Sbjct: 127 LKRVYVLIDARHGIKAKDDEVLSLLDKAAVSYQIVLTKTDKIKTAGVPRLIEETLAKIKK 186 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 P A P V+ TSS K +G+E L+ AI+ Sbjct: 187 RPAAFPFVLATSSEKAEGLEELQAAIV 213 >gi|319898440|ref|YP_004158533.1| GTP-binding protein [Bartonella clarridgeiae 73] gi|319402404|emb|CBI75945.1| GTP-binding protein [Bartonella clarridgeiae 73] Length = 213 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 113/200 (56%), Positives = 143/200 (71%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 WIF+RGVP + LP GPPEIAF+GRSNVGKSSLIN LV +KNLARTSN PGRTQ LN+ Sbjct: 13 NWIFIRGVPTMKFLPAEGPPEIAFAGRSNVGKSSLINALVQQKNLARTSNTPGRTQELNY 72 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+P F+ N P +A VDMPGYG+A APK V++W LI YL R+TL+ VY+LID Sbjct: 73 FIPDGFNGQSQNFPPIAFVDMPGYGFAEAPKHLVNAWTHLIFDYLRGRTTLKRVYVLIDS 132 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RHG+K+ D + F+ LDK AVSYQIVLTK DK+ + + TK + +P A+PE++ Sbjct: 133 RHGIKKNDIETFNLLDKAAVSYQIVLTKSDKIKSDALKALIMITKTKLLKHPAAYPEILV 192 Query: 191 TSSVKRKGIEVLRKAILETI 210 TS+ K G+E LR AI++ I Sbjct: 193 TSAKKTFGLEELRTAIIQVI 212 >gi|116250221|ref|YP_766059.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium leguminosarum bv. viciae 3841] gi|119369242|sp|Q1MM59|ENGB_RHIL3 RecName: Full=Probable GTP-binding protein EngB gi|115254869|emb|CAK05943.1| putative GTP-binding protein [Rhizobium leguminosarum bv. viciae 3841] Length = 217 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 117/209 (55%), Positives = 144/209 (68%), Gaps = 1/209 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN P Sbjct: 5 EKPLF-GHPWIFIRGVPSLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTP 63 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S +LP A+VDMPGYGYA+APK+ VD W L+ YL R+TL+ Sbjct: 64 GRTQELNYFVPDGYSGEGGDLPPTAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLK 123 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D DV LDK AVSYQIVLTK DK+ + L +T IR P Sbjct: 124 RVYVLIDSRHGIKKNDDDVLDLLDKAAVSYQIVLTKTDKIKAAGVPKLLAETAEKIRKRP 183 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETIN 211 A+P V+ TSS K G++ LR+AI ET+ Sbjct: 184 AAYPGVLSTSSEKGDGLDELRQAIAETVG 212 >gi|241202848|ref|YP_002973944.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856738|gb|ACS54405.1| GTP-binding protein HSR1-related [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 217 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 117/209 (55%), Positives = 144/209 (68%), Gaps = 1/209 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN P Sbjct: 5 EKPLF-GHPWIFIRGVPSLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTP 63 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S +LP A+VDMPGYGYA+APK+ VD W L+ YL R+TL+ Sbjct: 64 GRTQELNYFVPDGYSGEGQDLPPTAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLK 123 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D DV LDK AVSYQIVLTK DK+ + L +T IR P Sbjct: 124 RVYVLIDSRHGIKKNDDDVLDLLDKAAVSYQIVLTKTDKIKAAGVPKLLAETAEKIRKRP 183 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETIN 211 A+P V+ TSS K G++ LR+AI ET+ Sbjct: 184 AAYPGVLSTSSEKGDGLDELRQAIAETVG 212 >gi|86356093|ref|YP_467985.1| GTPase EngB [Rhizobium etli CFN 42] gi|119369241|sp|Q2KD28|ENGB_RHIEC RecName: Full=Probable GTP-binding protein EngB gi|86280195|gb|ABC89258.1| GTP-binding protein [Rhizobium etli CFN 42] Length = 217 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 117/209 (55%), Positives = 147/209 (70%), Gaps = 1/209 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F WIF+RGVP + LP GPPE+AF+GRSNVGKSSLIN LV++K LARTSN P Sbjct: 5 EKPLF-GHPWIFIRGVPSLNFLPPEGPPEVAFAGRSNVGKSSLINALVSQKGLARTSNTP 63 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ Sbjct: 64 GRTQELNYFVPDGYSGEAGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLK 123 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D DV LDK AVSYQ+VLTK DK+ + L +T IR P Sbjct: 124 RVYVLIDSRHGIKKNDDDVLDLLDKAAVSYQLVLTKTDKIKAPAVPKLLAETADKIRKRP 183 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETIN 211 A+P ++ TSS K G++ LR+AI ET+ Sbjct: 184 AAYPYLLSTSSEKGDGLDELRQAIAETVG 212 >gi|304392401|ref|ZP_07374342.1| ribosome biogenesis GTP-binding protein YsxC [Ahrensia sp. R2A130] gi|303295505|gb|EFL89864.1| ribosome biogenesis GTP-binding protein YsxC [Ahrensia sp. R2A130] Length = 233 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 111/201 (55%), Positives = 137/201 (68%), Gaps = 2/201 (0%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W F+RGVP + LP+ GPPEIAF+GRSNVGKSSLIN L K LARTSN PGRTQ LN Sbjct: 33 GDWQFVRGVPAMKFLPEEGPPEIAFAGRSNVGKSSLINALTATKGLARTSNTPGRTQELN 92 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF P + ++ LP +ALVDMPGYG+A+APK VD+W LI YL R+TL+ VY+LID Sbjct: 93 FFTPD--AEFEDGLPPIALVDMPGYGFAKAPKDAVDAWTKLIFSYLRGRTTLKRVYVLID 150 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHGVK+ D++VF LDK AVSYQ+VLTK DK+ P + +T I A P ++ Sbjct: 151 ARHGVKKNDEEVFDLLDKAAVSYQLVLTKADKIKPPALVKLQAETLEKIAKRAAAFPFIV 210 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS K G++ L+ IL I Sbjct: 211 STSSEKGHGVDDLKGQILYAI 231 >gi|209547691|ref|YP_002279608.1| ribosome biogenesis GTP-binding protein YsxC [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238058987|sp|B5ZN41|ENGB_RHILW RecName: Full=Probable GTP-binding protein EngB gi|209533447|gb|ACI53382.1| GTP-binding protein HSR1-related [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 217 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 117/209 (55%), Positives = 145/209 (69%), Gaps = 1/209 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN P Sbjct: 5 EKPLF-GHPWIFIRGVPSLNFLPPEGPLEVAFAGRSNVGKSSLINALVGQKGLARTSNTP 63 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S ++P MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ Sbjct: 64 GRTQELNYFVPDGYSGESGDMPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLK 123 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K+ D DV LDK AVSYQIVLTK DK+ + L +T IR P Sbjct: 124 RVYVLIDSRHGIKKNDDDVLDLLDKAAVSYQIVLTKTDKIKAPAVPKLLAETAEKIRKRP 183 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETIN 211 A+P V+ TSS K G++ LR+AI ET+ Sbjct: 184 AAYPGVLSTSSEKGDGLDDLRQAIGETVG 212 >gi|328545252|ref|YP_004305361.1| GTPase EngB [polymorphum gilvum SL003B-26A1] gi|326414994|gb|ADZ72057.1| GTPase EngB [Polymorphum gilvum SL003B-26A1] Length = 218 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 107/206 (51%), Positives = 126/206 (61%), Gaps = 9/206 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + W FL V +I LP G EIAF+GRSNVGKSSLIN L +K LARTSN PGRT Sbjct: 18 LFAR-PWRFLTSVADIRQLPDIGSLEIAFAGRSNVGKSSLINALTGQKALARTSNTPGRT 76 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF A+ +VDMPGYGYA APK VD+W LI YL R TLR V+ Sbjct: 77 QMLNFF--------GAEGAAVTIVDMPGYGYAEAPKGMVDAWTDLIFAYLRGRPTLRRVF 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K D + LDK AV YQ+VLTK DK+ P + T + P AH Sbjct: 129 LLIDSRHGLKSNDLEAMQLLDKAAVVYQVVLTKADKIKPGQLDRLVVDTAKALAKRPAAH 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETIN 211 PE++ TSS K GI+ LR AI +N Sbjct: 189 PEILVTSSEKNTGIDSLRAAIAVLVN 214 >gi|254473683|ref|ZP_05087078.1| GTP-binding protein [Pseudovibrio sp. JE062] gi|211957069|gb|EEA92274.1| GTP-binding protein [Pseudovibrio sp. JE062] Length = 216 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 108/207 (52%), Positives = 131/207 (63%), Gaps = 9/207 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + W F+ V E+ LP EIAF+GRSNVGKSSLIN L +K LARTSN PGRT Sbjct: 18 LFAR-PWEFITSVKEMHQLPVLDGIEIAFAGRSNVGKSSLINKLTGKKALARTSNTPGRT 76 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF + + +VDMPGYGYA APK VD+W LI YL RSTLR V+ Sbjct: 77 QMLNFFGAEHSM--------LKIVDMPGYGYAEAPKGMVDAWTSLIFDYLRGRSTLRRVF 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LID RHG+K+ D D + LDK AV YQ+VLTK DKL P Q E+T ++ P AH Sbjct: 129 SLIDSRHGIKKNDLDAMAILDKAAVPYQVVLTKADKLKPGQLQRMKEETLKVLAKRPAAH 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETINY 212 PEVI TSS K G++ LR I + ++Y Sbjct: 189 PEVIATSSEKGLGMDDLRAEIAQLVSY 215 >gi|254501660|ref|ZP_05113811.1| small GTP-binding protein domain, putative [Labrenzia alexandrii DFL-11] gi|222437731|gb|EEE44410.1| small GTP-binding protein domain, putative [Labrenzia alexandrii DFL-11] Length = 215 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 100/204 (49%), Positives = 126/204 (61%), Gaps = 9/204 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + W FL V ++ LP A EIAF+GRSNVGKSSLIN L RK LARTS+ PGRT Sbjct: 18 MFARQ-WDFLTSVTDMANLPPAAGTEIAFAGRSNVGKSSLINALTGRKGLARTSSTPGRT 76 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFFV + +VDMPGYGYA+APK+ V++W L+ YL R LR V Sbjct: 77 QMLNFFV--------APETPLTIVDMPGYGYAQAPKELVEAWTNLVFSYLRGRPNLRRVI 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K+ D + LDK AV YQ+VLTK DK+ P +++TK AH Sbjct: 129 LLIDSRHGIKKNDLEAMELLDKAAVVYQVVLTKADKIKPPALVRLIDETKAASAKRVAAH 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILET 209 PE+I TSS K +G++ LR + Sbjct: 189 PEIIATSSEKNRGVDELRAELCNL 212 >gi|94495880|ref|ZP_01302459.1| GTP-binding protein [Sphingomonas sp. SKA58] gi|94424572|gb|EAT09594.1| GTP-binding protein [Sphingomonas sp. SKA58] Length = 215 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 99/208 (47%), Positives = 126/208 (60%), Gaps = 8/208 (3%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 + +F FL+ P++ LP E+AF+GRSNVGKSSL+N L NR LARTSN P Sbjct: 13 ARKLFA-GPIAFLKSAPDLKFLPDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTP 71 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LNFF D LVDMPGYGYA+APK V W L+ YL R+ L+ Sbjct: 72 GRTQELNFFDVGDPL-------RFRLVDMPGYGYAKAPKDMVKKWRFLVNDYLRGRAALK 124 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 +LID RHG+K +D D+ LD AVSY+IVLTK DK+ + ++T IR P Sbjct: 125 RTLVLIDSRHGIKDVDTDMLDMLDGAAVSYRIVLTKADKIKASALAAVTQQTADAIRKRP 184 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETI 210 AHP++I TSS K G+ LR A+LE++ Sbjct: 185 AAHPDIIATSSEKGMGLPELRAAVLESV 212 >gi|118589751|ref|ZP_01547156.1| GTP-binding protein [Stappia aggregata IAM 12614] gi|118437837|gb|EAV44473.1| GTP-binding protein [Stappia aggregata IAM 12614] Length = 215 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 98/197 (49%), Positives = 127/197 (64%), Gaps = 8/197 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 W FL V ++ LP+A EIAF+GRSNVGKSSLIN L RK+LARTS PGRTQ LNF Sbjct: 22 PWDFLTSVTDMANLPEAAGAEIAFAGRSNVGKSSLINALTGRKDLARTSATPGRTQMLNF 81 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ + +VDMPGYGYA+APK+ V++W L+ YL R LR V LLID Sbjct: 82 FI--------APETPLTIVDMPGYGYAQAPKELVEAWTKLVFSYLRGRPNLRRVILLIDS 133 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RHG+K+ D + LDK AV YQ+VLTK DK+ P +E+T+ ++R AHPE++ Sbjct: 134 RHGIKKNDLEAMELLDKAAVVYQVVLTKSDKIKPPQLVRLIEETQAILRKRVAAHPEILA 193 Query: 191 TSSVKRKGIEVLRKAIL 207 TSS K +G++ LR + Sbjct: 194 TSSEKNRGVDELRAELF 210 >gi|103485501|ref|YP_615062.1| ribosome biogenesis GTP-binding protein YsxC [Sphingopyxis alaskensis RB2256] gi|119369262|sp|Q1GN74|ENGB_SPHAL RecName: Full=Probable GTP-binding protein EngB gi|98975578|gb|ABF51729.1| GTP-binding [Sphingopyxis alaskensis RB2256] Length = 219 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 101/208 (48%), Positives = 126/208 (60%), Gaps = 8/208 (3%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 + +F+ FL+ P + LP PEIAF+GRSNVGKSSL+N L NR LARTS P Sbjct: 18 ARKLFS-GPIAFLKSAPALQHLPVPSVPEIAFAGRSNVGKSSLLNALTNRNGLARTSVTP 76 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+F + P LVDMPGYG+A+APK V W LI YL R L+ Sbjct: 77 GRTQELNYFDVGE-------PPVFRLVDMPGYGFAKAPKDVVRKWRFLINDYLRGRQVLK 129 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 +LID RHG+K +D+DV LD AVSY++VLTK DK+ + + T+ R +P Sbjct: 130 RTLVLIDSRHGIKDVDRDVLEMLDTAAVSYRLVLTKADKIKASALADVHAATEAEARKHP 189 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETI 210 AHPEVI TSS K GI LR A+LE + Sbjct: 190 AAHPEVIATSSEKGMGIAELRTAVLEAV 217 >gi|332186237|ref|ZP_08387982.1| ribosome biogenesis GTP-binding protein YsxC [Sphingomonas sp. S17] gi|332013605|gb|EGI55665.1| ribosome biogenesis GTP-binding protein YsxC [Sphingomonas sp. S17] Length = 224 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 98/210 (46%), Positives = 128/210 (60%), Gaps = 8/210 (3%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F FL+ P + LP PEIA +GRSNVGKSSL+N L NR LARTSN Sbjct: 23 AARKLFA-GPVTFLKSAPALKFLPDPIVPEIAVAGRSNVGKSSLLNALTNRNGLARTSNT 81 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ LNFF N P + LVDMPGYG+A+APK V W L+ +L R L Sbjct: 82 PGRTQELNFFDVG-------NPPTLRLVDMPGYGFAKAPKDMVKQWRFLVNDFLRGRQAL 134 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +LID RHG+K++D+++ LD+ AVSY+IVLTK DK+ T + + +T+ R Sbjct: 135 KRALVLIDSRHGIKEVDREILEMLDRAAVSYRIVLTKADKVKATELADVVARTEVEARKR 194 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 P AHP+++ TSS GI LR A+LE I Sbjct: 195 PAAHPDILATSSEGGMGIAELRAAVLEAIG 224 >gi|312113265|ref|YP_004010861.1| ribosome biogenesis GTP-binding protein YsxC [Rhodomicrobium vannielii ATCC 17100] gi|311218394|gb|ADP69762.1| ribosome biogenesis GTP-binding protein YsxC [Rhodomicrobium vannielii ATCC 17100] Length = 214 Score = 253 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 100/203 (49%), Positives = 131/203 (64%), Gaps = 9/203 (4%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 K+ F+ GV ++ LP+ PE+AF+GRSNVGKSSL+N L++R+NLAR SN PGRT+ Sbjct: 21 FKAPAEFVLGVTDVAALPEGNRPEVAFAGRSNVGKSSLLNALLSRRNLARVSNTPGRTRE 80 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +N+F D A+ +VDMPGYGYA+APK V W LI YL R L+ V LL Sbjct: 81 VNYFSVGD---------ALYVVDMPGYGYAKAPKALVKGWTQLIHDYLRGRPQLKRVMLL 131 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID RHG+K D+++ + LDK AVSYQ VLTK DK + + +T+ ++R +P AHP Sbjct: 132 IDSRHGLKPSDKEIMTLLDKAAVSYQGVLTKADKPKAGDLGQVVRETEAVMRTHPAAHPV 191 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ TSSV GIE LR AI E Sbjct: 192 VLTTSSVDGAGIEELRTAIAELC 214 >gi|288957365|ref|YP_003447706.1| GTP-binding protein [Azospirillum sp. B510] gi|288909673|dbj|BAI71162.1| GTP-binding protein [Azospirillum sp. B510] Length = 227 Score = 253 bits (648), Expect = 9e-66, Method: Composition-based stats. Identities = 91/202 (45%), Positives = 122/202 (60%), Gaps = 10/202 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F K F+ G + LP+A PE+AF+GRSNVGKSSL+N L RK LARTSN PGRT Sbjct: 29 LFAK-ECDFVWGANALNQLPEADLPEVAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRT 87 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF D + LVDMPGYGYA+ K+ V++W ++ R+L R TLR Sbjct: 88 QQLNFFNLGDR---------LKLVDMPGYGYAKESKEKVEAWNDMVRRFLRGRVTLRRAL 138 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K D ++ LD+ AV Y +VLTK DK+ + T+ ++ +P A Sbjct: 139 VLIDSRHGLKPNDHEIMEMLDRTAVPYVVVLTKADKVKEADLDKVRRATELGLKKHPAAF 198 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P++ TSS K GI LR ++ Sbjct: 199 PDIHVTSSEKGLGIAELRASLA 220 >gi|307294061|ref|ZP_07573905.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobium chlorophenolicum L-1] gi|306880212|gb|EFN11429.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobium chlorophenolicum L-1] Length = 215 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 98/197 (49%), Positives = 122/197 (61%), Gaps = 7/197 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P++ LP E+AF+GRSNVGKSSL+N L NR LARTSN PGRTQ LNFF Sbjct: 23 FLKSAPDLKFLPDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFFDV 82 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVDMPGYGYA+APK V W L+ YL R+ L+ +LID RHG Sbjct: 83 GDPL-------RFRLVDMPGYGYAKAPKDMVRKWRFLVNDYLRGRAKLKRTLVLIDSRHG 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D D+ LD AVSY+IVLTK DK+ + E + IR P AHP++I TSS Sbjct: 136 IKDVDTDILDMLDAAAVSYRIVLTKADKVKASHLAEVKQAVAEAIRKRPAAHPDIIATSS 195 Query: 194 VKRKGIEVLRKAILETI 210 K G+ LR A+LE++ Sbjct: 196 EKGMGLPELRAAVLESV 212 >gi|87198603|ref|YP_495860.1| GTPase EngB [Novosphingobium aromaticivorans DSM 12444] gi|119369226|sp|Q2GAU7|ENGB_NOVAD RecName: Full=Probable GTP-binding protein EngB gi|87134284|gb|ABD25026.1| GTP-binding protein [Novosphingobium aromaticivorans DSM 12444] Length = 217 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 94/195 (48%), Positives = 123/195 (63%), Gaps = 7/195 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P + LP PEIAF+GRSNVGKSSL+N L RK+LARTS PGRTQ LN+F Sbjct: 26 FLKSAPALKFLPDPDVPEIAFAGRSNVGKSSLLNALTGRKSLARTSVTPGRTQELNYFEV 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVDMPGYG+A+AP K V++W L+ +L R L+ LLID RHG Sbjct: 86 GE-------PTRLRLVDMPGYGFAKAPPKVVETWRRLVRDFLRGRVVLKRTLLLIDSRHG 138 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D D+ LD+ V Y+IVLTK DK+ + ++ +T R A+PE+I TSS Sbjct: 139 VKPVDDDMMQMLDEAGVGYRIVLTKADKIKASELEKVTAETIAAARKRTAAYPEIIVTSS 198 Query: 194 VKRKGIEVLRKAILE 208 K+ GIE LR A+L+ Sbjct: 199 EKKMGIEELRAAVLQ 213 >gi|241762237|ref|ZP_04760319.1| GTP-binding protein HSR1-related [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373284|gb|EER62903.1| GTP-binding protein HSR1-related [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 212 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 97/201 (48%), Positives = 124/201 (61%), Gaps = 7/201 (3%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 A FL+ P + LP PE+AF+GRSNVGKSSLIN L NR +LAR S PGRTQ LN Sbjct: 18 GAVNFLKSAPALEFLPAPTAPEVAFAGRSNVGKSSLINALTNRNSLARASTTPGRTQELN 77 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + M LVDMPGYG+A+APK V W LI YL R+ LR +LID Sbjct: 78 FFDVGEPL-------QMRLVDMPGYGFAKAPKDVVKRWKWLINDYLRGRAVLRRSLILID 130 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K +D+D+ LD A+SY++VLTK DK+ ++T++ +R +P A PE+I Sbjct: 131 SRHGIKDVDRDLMKMLDDAAISYRVVLTKSDKIKAAELEKTVKAITEEMRKHPAAFPEII 190 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS K GI LR A+ + I Sbjct: 191 ATSSEKGTGIAELRAAVYDAI 211 >gi|56552523|ref|YP_163362.1| ribosome biogenesis GTP-binding protein YsxC [Zymomonas mobilis subsp. mobilis ZM4] gi|260753816|ref|YP_003226709.1| ribosome biogenesis GTP-binding protein YsxC [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|13124231|sp|Q9RNL6|ENGB_ZYMMO RecName: Full=GTP-binding protein EngB; AltName: Full=GTP-binding protein CgpA gi|5932358|gb|AAD56911.1|AF180145_3 GTP-binding protein CgpA [Zymomonas mobilis subsp. mobilis ZM4] gi|56544097|gb|AAV90251.1| GTP-binding protein HSR1-related protein [Zymomonas mobilis subsp. mobilis ZM4] gi|258553179|gb|ACV76125.1| GTP-binding protein HSR1-related [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 212 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 97/201 (48%), Positives = 124/201 (61%), Gaps = 7/201 (3%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 A FL+ P + LP PE+AF+GRSNVGKSSLIN L NR +LAR S PGRTQ LN Sbjct: 18 GAVNFLKSAPALEFLPAPTAPEVAFAGRSNVGKSSLINALTNRNSLARASTTPGRTQELN 77 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + M LVDMPGYG+A+APK V W LI YL R+ LR +LID Sbjct: 78 FFDVGEPL-------QMRLVDMPGYGFAKAPKDVVKRWKWLINDYLRGRAVLRRSLILID 130 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K +D+D+ LD A+SY++VLTK DK+ ++T++ +R +P A PE+I Sbjct: 131 SRHGIKDVDRDLMKMLDDAAISYRVVLTKSDKIKAVELEKTVKAITEEMRKHPAAFPEII 190 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS K GI LR A+ + I Sbjct: 191 ATSSEKGTGIAELRAAVYDAI 211 >gi|218679046|ref|ZP_03526943.1| GTPase EngB [Rhizobium etli CIAT 894] Length = 185 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 104/180 (57%), Positives = 129/180 (71%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +AF+GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+FVP +S +LP A+VDM Sbjct: 1 MAFAGRSNVGKSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGEGGDLPPTAIVDM 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYGYA+APK+ VD W L+ YL R+TL+ VY+LID RHG+K+ D+DV LDK AVS Sbjct: 61 PGYGYAQAPKEQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEDVLDLLDKAAVS 120 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 YQIVLTK DK+ + L +T IR P A+P V+ TSS K G++ LR+AI ET+ Sbjct: 121 YQIVLTKTDKIKAAGVPKLLAETAERIRKRPAAYPAVLSTSSEKGDGMDELRQAIAETVG 180 >gi|310816970|ref|YP_003964934.1| GTP-binding protein HSR1-related protein [Ketogulonicigenium vulgare Y25] gi|308755705|gb|ADO43634.1| GTP-binding protein HSR1-related protein [Ketogulonicigenium vulgare Y25] Length = 216 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 97/197 (49%), Positives = 124/197 (62%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A EI F+GRSNVGKSSLIN L RK+LAR SN PGRTQ LNFF Sbjct: 29 FVKGVVAMSGLPPADRVEICFAGRSNVGKSSLINALTGRKSLARASNTPGRTQELNFFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA AP V+ W L+ YLS R TLR ++LID RHG Sbjct: 89 GEDR---------YMVDLPGYGYANAPLAVVEKWQKLLKSYLSGRQTLRRAFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ + LDK AV++Q+V+TK DK+S E+ K ++ +P A+PEV+ TSS Sbjct: 140 VKSVDDEIMNLLDKSAVTFQVVMTKADKVSKAELAANFEQVKGALKKHPAAYPEVVLTSS 199 Query: 194 VKRKGIEVLRKAILETI 210 K GIE LR I I Sbjct: 200 EKGDGIETLRAIIAGLI 216 >gi|294675900|ref|YP_003576515.1| GTP-binding protein EngB [Rhodobacter capsulatus SB 1003] gi|294474720|gb|ADE84108.1| GTP-binding protein EngB [Rhodobacter capsulatus SB 1003] Length = 216 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 95/202 (47%), Positives = 127/202 (62%), Gaps = 9/202 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + + +FL+GV + LP A E+ F+GRSNVGKSSLIN L RKNLAR SN PGRT Sbjct: 21 LLFAAQVLFLKGVVAMAGLPPADRIEVCFAGRSNVGKSSLINALTGRKNLARASNTPGRT 80 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q +NFF + LVD+PGYG+A AP V W L+ YLS R+TLR + Sbjct: 81 QEINFFTTEGGP---------YLVDLPGYGFAEAPVAIVKKWQALLKSYLSGRATLRRAF 131 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHGVK +D+++ LD+ AV++Q VLTK DK+S + +E+ K + +P A+ Sbjct: 132 VLIDARHGVKAVDEEILQLLDRSAVTFQAVLTKADKISKAELERVIEQVKGALAKHPAAY 191 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 PE++ TSS K +GIE LR I Sbjct: 192 PEIVVTSSEKGEGIETLRAIIA 213 >gi|154250754|ref|YP_001411578.1| ribosome biogenesis GTP-binding protein YsxC [Parvibaculum lavamentivorans DS-1] gi|154154704|gb|ABS61921.1| GTP-binding protein HSR1-related [Parvibaculum lavamentivorans DS-1] Length = 235 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 104/206 (50%), Positives = 127/206 (61%), Gaps = 6/206 (2%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + A F+RGV + LP E+AF+GRSNVGKSSLIN L RK LARTSN PGRT Sbjct: 26 LFAQ-ACDFVRGVVAMDGLPSTTITEVAFAGRSNVGKSSLINALTGRKTLARTSNTPGRT 84 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + LNFF N PA+ LVD+PGYGYAR + VD W LI+ YL R LR V Sbjct: 85 KELNFFALGTSGN-----PAIMLVDLPGYGYARETRTRVDQWTDLIMAYLRGRVPLRRVL 139 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K D V + LD+ AVSYQIVLTKIDKL + L++ + IR + AH Sbjct: 140 VLIDARHGLKDNDHSVMTLLDEAAVSYQIVLTKIDKLKAGELETRLDEVRAGIRRHVAAH 199 Query: 186 PEVIPTSSVKRKGIEVLRKAILETIN 211 P ++ TSS K GI LR I + Sbjct: 200 PRIVATSSEKGTGIAELRAEIASLAD 225 >gi|294010744|ref|YP_003544204.1| GTP-binding protein [Sphingobium japonicum UT26S] gi|292674074|dbj|BAI95592.1| GTP-binding protein [Sphingobium japonicum UT26S] Length = 215 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 98/197 (49%), Positives = 121/197 (61%), Gaps = 7/197 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P++ LP E+AF+GRSNVGKSSL+N L NR LARTSN PGRTQ LNFF Sbjct: 23 FLKSAPDLKFLPDMAVNEVAFAGRSNVGKSSLLNALTNRNGLARTSNTPGRTQELNFFDV 82 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVDMPGYGYA+APK V W L+ YL R+ L+ +LID RHG Sbjct: 83 GDPL-------RFRLVDMPGYGYAKAPKDMVRKWRFLVNDYLRGRAKLKRTLVLIDSRHG 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D D+ LD AVSY+IVLTK DK+ + E IR P AHP++I TSS Sbjct: 136 IKDVDTDILDMLDAAAVSYRIVLTKADKVKASHLAEVRHSVTEAIRKRPAAHPDIIATSS 195 Query: 194 VKRKGIEVLRKAILETI 210 K G+ LR A+LE++ Sbjct: 196 EKGMGLPELRAAVLESV 212 >gi|315498840|ref|YP_004087644.1| ribosome biogenesis gtp-binding protein ysxc [Asticcacaulis excentricus CB 48] gi|315416852|gb|ADU13493.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis excentricus CB 48] Length = 231 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 99/209 (47%), Positives = 126/209 (60%), Gaps = 10/209 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F + A F+ G +I LP A PE+ F+GRSNVGKSSLIN LV + +LAR SN Sbjct: 29 AARVLFARPA-TFMMGAAKIEQLPAADLPEVTFAGRSNVGKSSLINALVGQNHLARASNE 87 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+ +NFFV + + LVD+PGYG+A+A K V + L YL R L Sbjct: 88 PGRTREVNFFVLDE---------KLRLVDLPGYGWAKASKAEVKKFQNLGRDYLRGRPNL 138 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + YLLID RHG+K +D + LD AVSYQIVLTK DK+ P + +EKT+ IR Sbjct: 139 KRAYLLIDARHGLKAVDNEPMDALDVAAVSYQIVLTKADKIKPHELKAVIEKTQAQIRKR 198 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETI 210 P AHP V+ TSS K GI LR I+ T Sbjct: 199 PAAHPVVLATSSEKGHGIPELRAEIMTTC 227 >gi|148556520|ref|YP_001264102.1| ribosome biogenesis GTP-binding protein YsxC [Sphingomonas wittichii RW1] gi|148501710|gb|ABQ69964.1| GTP-binding protein, HSR1-related [Sphingomonas wittichii RW1] Length = 220 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 96/197 (48%), Positives = 127/197 (64%), Gaps = 2/197 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P++ LP PE+AF+GRSNVGKSSL+N L NR LARTSN PGRTQ LNFF Sbjct: 24 FLKSAPDLRYLPDPVAPEVAFAGRSNVGKSSLLNRLTNRVGLARTSNTPGRTQELNFFDV 83 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + +PA+ LVDMPGYG+A+APK V W ++ YL R LR +LID RHG Sbjct: 84 G--ADEEGGVPALRLVDMPGYGFAKAPKDIVRKWRHVVNDYLRGRVVLRRALVLIDSRHG 141 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ LDK AV+Y +VLTK DK+ + E+T R + AHP ++ TSS Sbjct: 142 IKDVDREIMEMLDKAAVTYHLVLTKADKIKASELAAVTERTAAEARTHVAAHPRLLVTSS 201 Query: 194 VKRKGIEVLRKAILETI 210 K G+ LR AIL+ I Sbjct: 202 EKDMGMAELRAAILDAI 218 >gi|300024924|ref|YP_003757535.1| ribosome biogenesis GTP-binding protein YsxC [Hyphomicrobium denitrificans ATCC 51888] gi|299526745|gb|ADJ25214.1| ribosome biogenesis GTP-binding protein YsxC [Hyphomicrobium denitrificans ATCC 51888] Length = 221 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 96/206 (46%), Positives = 128/206 (62%), Gaps = 9/206 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +FT+ AW F RG P + LP PEIAF+GRSNVGKSSLIN LV ++ LAR SN PGRT Sbjct: 21 LFTR-AWTFSRGSPGLDHLPPDDRPEIAFAGRSNVGKSSLINALVGQRTLARASNTPGRT 79 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF + + LVDMPGYG+A APK V +W + +L+ R TL V+ Sbjct: 80 QELNFFT--------DPNADLYLVDMPGYGFAEAPKDKVAAWNKTLRSFLAGRRTLLRVF 131 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +L+D RHG+K +D ++ + LD AVSYQ++LTK DK+S T + T + +P A+ Sbjct: 132 VLVDARHGLKPVDDEIMALLDGAAVSYQVLLTKADKISRTDLERVTANTTKSLAKHPAAY 191 Query: 186 PEVIPTSSVKRKGIEVLRKAILETIN 211 P V+ TSS G E LR + + I+ Sbjct: 192 PRVLATSSETGMGFEDLRAVVAKLID 217 >gi|119383630|ref|YP_914686.1| GTPase EngB [Paracoccus denitrificans PD1222] gi|119373397|gb|ABL68990.1| small GTP-binding protein [Paracoccus denitrificans PD1222] Length = 216 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 90/194 (46%), Positives = 122/194 (62%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A PE+ F+GRSN GKSSLIN L RK+LAR SN PGRTQ +N+F Sbjct: 29 FLKGVVAMDGLPPADRPEVCFAGRSNAGKSSLINALTGRKSLARASNTPGRTQEINYFTL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYG+A+AP V W L+ YLS R TLR + LID RHG Sbjct: 89 GERA---------YLVDLPGYGFAKAPVAVVAKWQALLKNYLSGRPTLRRAFTLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ LD+ AV +Q+VLTK DK+ + T+ + + ++ +P A+PE++ TSS Sbjct: 140 VKDVDHEIMKLLDRSAVPFQVVLTKADKIGAQAMEATVAQVQEALQKHPAAYPELVITSS 199 Query: 194 VKRKGIEVLRKAIL 207 K +GI LR I Sbjct: 200 EKGQGIATLRAIIA 213 >gi|84515674|ref|ZP_01003035.1| GTP-binding protein [Loktanella vestfoldensis SKA53] gi|84510116|gb|EAQ06572.1| GTP-binding protein [Loktanella vestfoldensis SKA53] Length = 215 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 93/195 (47%), Positives = 125/195 (64%), Gaps = 10/195 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 28 TFVKGVVAMDGLPPADRIEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFT 87 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D + +VD+PGYG+A AP V+ W L+ +YL R TLR V++LID RH Sbjct: 88 AGD----------IYVVDLPGYGFANAPVAVVEKWQRLLKQYLQGRQTLRRVFVLIDARH 137 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 G K +D+++ S LD AV++Q+V+TK+DKL E+L KT+ + +P A+PE+I TS Sbjct: 138 GAKAVDEEIMSLLDASAVTFQVVMTKVDKLRGDALAESLAKTRAALVKHPAAYPELILTS 197 Query: 193 SVKRKGIEVLRKAIL 207 + K +GI LR I Sbjct: 198 AEKGEGIPTLRAIIA 212 >gi|144899246|emb|CAM76110.1| GTP-binding protein [Magnetospirillum gryphiswaldense MSR-1] Length = 193 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 99/197 (50%), Positives = 122/197 (61%), Gaps = 9/197 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +RG ++ LP G PE+AF+GRSNVGKSSLIN L R +ARTSN PGRTQ LNFF Sbjct: 1 MRGAVDLETLPPFGLPELAFAGRSNVGKSSLINALCGRSTVARTSNTPGRTQELNFFDVN 60 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + LVDMPGYG+A APK VD+W LI +L R TLR LL+D RHG+ Sbjct: 61 ---------GRLILVDMPGYGFASAPKDKVDAWTRLIKGFLRGRPTLRRCILLVDSRHGL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K D+++ LDK AV YQ+VLTKIDKL+ + E+T+ I A+P +I TSS Sbjct: 112 KDNDREMMDMLDKAAVVYQVVLTKIDKLNAAEVKAVQERTQAEISKRVAAYPTLILTSSE 171 Query: 195 KRKGIEVLRKAILETIN 211 K GI LR IL+ N Sbjct: 172 KGIGIPELRAEILQLAN 188 >gi|126734529|ref|ZP_01750275.1| GTP-binding protein [Roseobacter sp. CCS2] gi|126715084|gb|EBA11949.1| GTP-binding protein [Roseobacter sp. CCS2] Length = 215 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 93/194 (47%), Positives = 125/194 (64%), Gaps = 10/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN + RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMDGLPPADRVEVCFAGRSNVGKSSLINAITGRKGLARASNTPGRTQEINFFTA 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + +VD+PGYG+A AP V+ W L+ +YL R TLR V++LID RHG Sbjct: 89 GD----------IYVVDLPGYGFATAPVAVVEKWQRLLKQYLQGRQTLRRVFVLIDARHG 138 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K +D+++ S LD AV++Q+V+TK+DKL Q +L+KT+ + +P A PE+I TSS Sbjct: 139 AKAVDEEIMSLLDSSAVTFQVVMTKVDKLKGEALQASLDKTRAALAKHPAAFPELILTSS 198 Query: 194 VKRKGIEVLRKAIL 207 K GI+ LR I Sbjct: 199 EKGDGIKTLRAIIA 212 >gi|163733768|ref|ZP_02141210.1| GTPase EngB [Roseobacter litoralis Och 149] gi|161392879|gb|EDQ17206.1| GTPase EngB [Roseobacter litoralis Och 149] Length = 216 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 90/196 (45%), Positives = 122/196 (62%), Gaps = 9/196 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMSGLPDPDRMEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFTA 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 GESH---------YLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K++D+++ S LD AV++Q+VLTK DK+ ++ L++ + + +P A PE++ TSS Sbjct: 140 AKKVDEEILSLLDSAAVTFQVVLTKADKVKEKEREKVLDQVRNALSKHPAAFPELVVTSS 199 Query: 194 VKRKGIEVLRKAILET 209 K GI LR I + Sbjct: 200 EKGWGIPTLRSIITDL 215 >gi|146278899|ref|YP_001169058.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter sphaeroides ATCC 17025] gi|145557140|gb|ABP71753.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC 17025] Length = 217 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 9/202 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + A F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRT Sbjct: 22 LLFAGACDFVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRT 81 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q +N+F P+ LVD+PGYGYA APK V+ W L+ YL+ R TLR + Sbjct: 82 QEINYFALG---------PSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAF 132 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K +D+++ + LD+ AV++Q+V+TK DK+S + L + + ++ +P A+ Sbjct: 133 VLIDTRHGIKSVDEEILNLLDRSAVTFQVVMTKADKVSQAEREAVLGQVRGALKKHPAAY 192 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 PE++ TSS K GIE LR I Sbjct: 193 PELVMTSSEKGLGIETLRTIIA 214 >gi|110678769|ref|YP_681776.1| ribosome biogenesis GTP-binding protein YsxC [Roseobacter denitrificans OCh 114] gi|119369250|sp|Q16AA3|ENGB_ROSDO RecName: Full=Probable GTP-binding protein EngB gi|109454885|gb|ABG31090.1| GTP-binding protein [Roseobacter denitrificans OCh 114] Length = 216 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 91/196 (46%), Positives = 123/196 (62%), Gaps = 9/196 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMSGLPDPDRLEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFTA 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 GESH---------YLVDLPGYGYANAPVPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ S LD AV++Q+VLTK DK+ ++ L++ + + +P A PE++ TSS Sbjct: 140 VKKVDEEILSLLDSAAVTFQVVLTKADKVKEKEREKVLDQVRTALSKHPAAFPELVITSS 199 Query: 194 VKRKGIEVLRKAILET 209 K GI LR I + Sbjct: 200 EKGWGIPTLRSIITDL 215 >gi|56695444|ref|YP_165792.1| ribosome biogenesis GTP-binding protein YsxC [Ruegeria pomeroyi DSS-3] gi|81558731|sp|Q5LW13|ENGB_SILPO RecName: Full=Probable GTP-binding protein EngB gi|56677181|gb|AAV93847.1| GTP-binding protein [Ruegeria pomeroyi DSS-3] Length = 217 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 92/198 (46%), Positives = 119/198 (60%), Gaps = 9/198 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N Sbjct: 26 GPSEFVKGVVAMSGLPPADRVEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEIN 85 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF P + LVD+PGYGYA AP K V+ W L+ +YLS R TLR ++LID Sbjct: 86 FFTQG---------PELYLVDLPGYGYANAPLKVVEKWQKLLKQYLSGRQTLRRAFVLID 136 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHGVK +D ++ LD AV++Q VLTK DK+ + L + + + +P A+PE++ Sbjct: 137 ARHGVKAVDDEIMKLLDTSAVTFQCVLTKADKVKAAERDKVLAQVRAALAKHPAAYPEIV 196 Query: 190 PTSSVKRKGIEVLRKAIL 207 TSS K GI LR I Sbjct: 197 LTSSEKGDGIATLRSIIA 214 >gi|85374953|ref|YP_459015.1| ribosome biogenesis GTP-binding protein YsxC [Erythrobacter litoralis HTCC2594] gi|84788036|gb|ABC64218.1| probable GTPase [Erythrobacter litoralis HTCC2594] Length = 213 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 90/194 (46%), Positives = 120/194 (61%), Gaps = 7/194 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP+ PEIAF GRSNVGKSSL+N L R+++ARTS PGRTQ LNFF Sbjct: 23 FLLSAPQLKFLPEPTVPEIAFCGRSNVGKSSLLNALTGRRSIARTSVTPGRTQELNFFEV 82 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVDMPGYG+A+AP K V+ W L+ YL R L +L+D RHG Sbjct: 83 GE-------PTQFRLVDMPGYGFAKAPVKVVERWKNLVRTYLKGRQVLARTLVLVDARHG 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ + LD+ AVSY++VLTK DK+ + + T K R +P A PE+ TSS Sbjct: 136 LKDVDREMMTMLDETAVSYRVVLTKADKIKASELEATAAKVAEEARKHPAAFPELHITSS 195 Query: 194 VKRKGIEVLRKAIL 207 K GI LR A++ Sbjct: 196 EKGLGIAALRAAVV 209 >gi|89068161|ref|ZP_01155578.1| GTP-binding protein [Oceanicola granulosus HTCC2516] gi|89046400|gb|EAR52457.1| GTP-binding protein [Oceanicola granulosus HTCC2516] Length = 218 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 88/195 (45%), Positives = 120/195 (61%), Gaps = 9/195 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++GV + LP A PE+ F+GRSNVGKS+LIN L RK LAR SN PGRTQ +N+F Sbjct: 30 TFVKGVVAMSGLPGADRPEVCFAGRSNVGKSTLINALTGRKALARASNTPGRTQEINYFA 89 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYG+A AP V W L+ +YL R TLR ++LID RH Sbjct: 90 LADSH---------YLVDLPGYGFANAPVAVVAKWQALLKQYLQGRQTLRRAFVLIDARH 140 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 G K +D+++ + LD AV++Q VLTK DK+ + L++ + + +P A+PE++ TS Sbjct: 141 GAKAVDEEIMALLDSAAVTFQCVLTKADKIKASERDRVLDQVRATLARHPAAYPEIVLTS 200 Query: 193 SVKRKGIEVLRKAIL 207 S K GIE LR + Sbjct: 201 SEKGDGIETLRAIVA 215 >gi|159042882|ref|YP_001531676.1| ribosome biogenesis GTP-binding protein YsxC [Dinoroseobacter shibae DFL 12] gi|157910642|gb|ABV92075.1| GTP-binding protein [Dinoroseobacter shibae DFL 12] Length = 217 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 91/195 (46%), Positives = 120/195 (61%), Gaps = 9/195 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 FL+GV + LP A E+ F+GRSNVGKSSLIN L RK LARTSN PGRTQ +N+F Sbjct: 29 TFLKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARTSNTPGRTQEINYFC 88 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYG+A AP V W L+ YL+ R TLR ++LID RH Sbjct: 89 LGEDR---------YLVDVPGYGFAEAPVAVVQKWQALLKAYLTGRPTLRRAFVLIDARH 139 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 G+K +D ++ S LD AV++Q+VLTK DK+ +TL + + + +P A PE++ TS Sbjct: 140 GIKAVDHEIMSLLDTAAVTFQVVLTKADKIKTAEQDKTLAQVRKELARHPAAFPELLLTS 199 Query: 193 SVKRKGIEVLRKAIL 207 S K GIE LR + Sbjct: 200 SAKGDGIETLRATVA 214 >gi|149186359|ref|ZP_01864672.1| GTP-binding protein [Erythrobacter sp. SD-21] gi|148829948|gb|EDL48386.1| GTP-binding protein [Erythrobacter sp. SD-21] Length = 217 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 85/194 (43%), Positives = 118/194 (60%), Gaps = 7/194 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP+ PEIAF+GRSNVGKSSL+N L R+ +AR S PGRTQ LNFF Sbjct: 26 FLLSAPQLKFLPEPTVPEIAFAGRSNVGKSSLLNALTGRRKIARASVTPGRTQELNFFEV 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVDMPGYG+A+AP K V+ W L+ YL R L +L+D RHG Sbjct: 86 GE-------PTQFRLVDMPGYGFAKAPVKVVEKWKNLVKTYLRGRQVLVRNLVLVDSRHG 138 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ LD+ AV Y++VLTK DK+ + +T+ + + + A+P++ TSS Sbjct: 139 LKDVDREMMKMLDEAAVGYRVVLTKADKIKASELAKTVAAVEAEAKKHVAAYPQIHVTSS 198 Query: 194 VKRKGIEVLRKAIL 207 K GI LR A+L Sbjct: 199 EKGMGIGELRAALL 212 >gi|296283113|ref|ZP_06861111.1| ribosome biogenesis GTP-binding protein YsxC [Citromicrobium bathyomarinum JL354] Length = 218 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 115/194 (59%), Gaps = 7/194 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP+ PEIA +GRSNVGKSSL+N L RK +AR S PGRTQ LN F Sbjct: 26 FLLSAPQLKFLPEPTVPEIALAGRSNVGKSSLLNALTMRKGIARASVTPGRTQELNIFEV 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVDMPGYG+A+APK V+ W ++ YL R L +L+D RHG Sbjct: 86 G-------QPTQFRLVDMPGYGFAKAPKSVVEKWQNVVRTYLRGRPVLARALVLVDSRHG 138 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + LD+ AV Y+IVLTK DK+ + ET +K + +P A+PE+ TS+ Sbjct: 139 LKDTDRAMMKMLDEAAVGYRIVLTKSDKIKASALAETHDKVAAEAKKHPAAYPEIHLTSA 198 Query: 194 VKRKGIEVLRKAIL 207 K +GI LR AI+ Sbjct: 199 EKGQGIAALRAAIV 212 >gi|307546852|ref|YP_003899331.1| GTPase EngB [Halomonas elongata DSM 2581] gi|307218876|emb|CBV44146.1| GTPase EngB [Halomonas elongata DSM 2581] Length = 206 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 109/201 (54%), Gaps = 8/201 (3%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 A FL P + P E+AF+GRSN GKSS IN+L +K LARTS PGRTQ +N Sbjct: 7 QAARFLTSAPTLAQCPADTGAEVAFAGRSNAGKSSAINVLTRQKALARTSKTPGRTQLIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D + LVD+PGYGYA+ P W + YL R++LR + LL+D Sbjct: 67 FFTLGD-------DTELRLVDLPGYGYAKVPDSVKLEWQRHLADYLQRRTSLRGLVLLMD 119 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + + DQ + + D++ + I+LTK DKL A+ L++ + +R + Sbjct: 120 VRHPLTEFDQTMLGWADEQDMPVHILLTKADKLKSGAAKNALQQVRSQLRE-WEDLVSIQ 178 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S++K++GIE + + + + Sbjct: 179 LFSALKKQGIEEVHARLDDWL 199 >gi|126463487|ref|YP_001044601.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter sphaeroides ATCC 17029] gi|332559540|ref|ZP_08413862.1| GTP-binding protein YsxC [Rhodobacter sphaeroides WS8N] gi|126105151|gb|ABN77829.1| GTP-binding protein, HSR1-related [Rhodobacter sphaeroides ATCC 17029] gi|332277252|gb|EGJ22567.1| GTP-binding protein YsxC [Rhodobacter sphaeroides WS8N] Length = 217 Score = 246 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 93/198 (46%), Positives = 131/198 (66%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK+LAR SN PGRTQ +N+F Sbjct: 30 FVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKSLARASNTPGRTQEINYFAL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P+ LVD+PGYGYA APK V+ W L+ YL+ R TLR ++LID RHG Sbjct: 90 G---------PSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q+V+TK DK+S + L++ + ++ +P A+PE++ TSS Sbjct: 141 VKSVDEEILTLLDRSAVTFQVVMTKADKVSQAEREAVLDQVRGALKKHPAAYPELVMTSS 200 Query: 194 VKRKGIEVLRKAILETIN 211 K GIE LR I+ T+ Sbjct: 201 EKGMGIETLR-TIVATLG 217 >gi|304322174|ref|YP_003855817.1| GTP-binding protein [Parvularcula bermudensis HTCC2503] gi|303301076|gb|ADM10675.1| GTP-binding protein [Parvularcula bermudensis HTCC2503] Length = 213 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 96/202 (47%), Positives = 124/202 (61%), Gaps = 10/202 (4%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 + +F + F+ GV + LP PE AF+GRSNVGKSSLIN L RK LARTSN P Sbjct: 14 ARKLF-RGDCQFMLGVTTMAALPPPDLPEFAFAGRSNVGKSSLINRLTGRKALARTSNTP 72 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRT+ LNFF + LVD+PGYGYA+A + V+SW GL +L R LR Sbjct: 73 GRTRELNFFDLG---------GRLRLVDLPGYGYAKASRSAVESWTGLTRDFLRGRPNLR 123 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 V++L+D RHG+K +D++ S LD+ AV YQ+VLTKIDK+ PT A ++ I P Sbjct: 124 RVHILVDSRHGLKPVDEETMSLLDESAVPYQLVLTKIDKIKPTEAARRIKAVGEAIGRRP 183 Query: 183 TAHPEVIPTSSVKRKGIEVLRK 204 AHP++I TSS GI LR+ Sbjct: 184 AAHPDIIATSSETGDGIAALRE 205 >gi|89053125|ref|YP_508576.1| ribosome biogenesis GTP-binding protein YsxC [Jannaschia sp. CCS1] gi|119369206|sp|Q28UR1|ENGB_JANSC RecName: Full=Probable GTP-binding protein EngB gi|88862674|gb|ABD53551.1| GTP-binding protein [Jannaschia sp. CCS1] Length = 218 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 93/194 (47%), Positives = 118/194 (60%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKS+LIN L RK LAR SN PGRTQ +N+F Sbjct: 30 FLKGVVAMDGLPPADRIEVCFAGRSNVGKSTLINALTGRKGLARASNTPGRTQEINYFTL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA AP V W L+ YL R+TLR ++LID RHG Sbjct: 90 LDSH---------YLVDLPGYGYAEAPLHVVQQWQALLKSYLQGRATLRRAFVLIDARHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ LD AV +Q VLTK DK+ +L +T+ + N+P A+PE+I TSS Sbjct: 141 VKAVDEEIMKLLDIAAVPFQTVLTKSDKVKGRDRDASLARTRKALANHPAAYPEIILTSS 200 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 201 EKGDGIPTLRATIA 214 >gi|84685376|ref|ZP_01013274.1| GTP-binding protein [Maritimibacter alkaliphilus HTCC2654] gi|84666533|gb|EAQ13005.1| GTP-binding protein [Rhodobacterales bacterium HTCC2654] Length = 218 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 90/194 (46%), Positives = 121/194 (62%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 31 FLKGVVAMNGLPPDDRIEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINFFTT 90 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYG+A AP V+ W L+ YLS R++LR ++LID RHG Sbjct: 91 TDGP---------YLVDLPGYGFANAPVAVVEKWQKLLKSYLSGRASLRRAFVLIDTRHG 141 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ + LDK AV++Q VLTK DK+ + L++ + + +P A+PE++ TSS Sbjct: 142 IKAVDEEIMTLLDKSAVTFQAVLTKADKVKAADRDKILKQVREKLSKHPAAYPELVMTSS 201 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 202 EKGDGIATLRAIIA 215 >gi|259415701|ref|ZP_05739621.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter sp. TrichCH4B] gi|259347140|gb|EEW58917.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter sp. TrichCH4B] Length = 216 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 91/194 (46%), Positives = 122/194 (62%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +NFF Sbjct: 29 FLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFFTQ 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 G---------PELYLVDLPGYGYANAPLAVVEKWQRLLKQYLSGRQTLRRAFVLIDTRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ LD AV++Q+V+TK DK+ + L++ + + +P A+PE++ TSS Sbjct: 140 VKKVDEEIMKLLDSAAVTFQVVMTKADKVKEKDRAKILDQVRDALSKHPAAYPEIVLTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 200 EKGDGIATLRSIIA 213 >gi|254461126|ref|ZP_05074542.1| GTP-binding protein [Rhodobacterales bacterium HTCC2083] gi|206677715|gb|EDZ42202.1| GTP-binding protein [Rhodobacteraceae bacterium HTCC2083] Length = 217 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 92/197 (46%), Positives = 120/197 (60%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKS+LIN L K LAR SN PGRTQ +NFF Sbjct: 30 FVKGVVAMSGLPDADRMEVCFAGRSNVGKSTLINALTGHKALARASNTPGRTQEINFFTA 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 90 AESH---------YLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDARHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ S LD AV++Q VLTK DK+ ++ L + + + +P A PE++ TSS Sbjct: 141 VKAVDHEIMSLLDSSAVTFQCVLTKADKVKLVDREKVLNQVRGELAKHPAAFPEMVLTSS 200 Query: 194 VKRKGIEVLRKAILETI 210 K GIE LR I I Sbjct: 201 EKGDGIEQLRAIIATLI 217 >gi|115522672|ref|YP_779583.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris BisA53] gi|123026147|sp|Q07TY1|ENGB_RHOP5 RecName: Full=Probable GTP-binding protein EngB gi|115516619|gb|ABJ04603.1| GTP-binding protein [Rhodopseudomonas palustris BisA53] Length = 216 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 98/208 (47%), Positives = 126/208 (60%), Gaps = 8/208 (3%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 + +F W F+ P + LP E+AF+GRSNVGKSSLIN L R LARTS+ P Sbjct: 13 ARKLFA-GDWQFIWASPSVETLPPMQGLEVAFAGRSNVGKSSLINALTGRNGLARTSHTP 71 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ L FF + LVDMPGYGYA APK + SW LI ++L R+TL Sbjct: 72 GRTQELIFFEGPADAG-------FRLVDMPGYGYAAAPKTKIASWTKLIHQFLQGRATLV 124 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 VY+LID RHG+K +D +V + LDK AVSYQIVLTK D++ P E + T +R +P Sbjct: 125 RVYVLIDARHGIKDVDNEVLTTLDKSAVSYQIVLTKADQVKPAELAERVAATTEALRKHP 184 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETI 210 A PE++ TSS G+ LR AI++ + Sbjct: 185 AAFPEIVVTSSRNASGMPELRAAIIKLV 212 >gi|221640559|ref|YP_002526821.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter sphaeroides KD131] gi|221161340|gb|ACM02320.1| GTP-binding protein engB [Rhodobacter sphaeroides KD131] Length = 217 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 93/198 (46%), Positives = 130/198 (65%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +N+F Sbjct: 30 FVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFAL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P+ LVD+PGYGYA APK V+ W L+ YL+ R TLR ++LID RHG Sbjct: 90 G---------PSRYLVDLPGYGYAEAPKPIVERWQRLLKGYLAGRQTLRRAFVLIDTRHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q+V+TK DK+S + L++ + ++ +P A+PE++ TSS Sbjct: 141 VKSVDEEILTLLDRSAVTFQVVMTKADKVSQAEREAVLDQVRGALKKHPAAYPELVMTSS 200 Query: 194 VKRKGIEVLRKAILETIN 211 K GIE LR I+ T+ Sbjct: 201 EKGMGIETLR-TIVATLG 217 >gi|85709447|ref|ZP_01040512.1| GTP-binding protein [Erythrobacter sp. NAP1] gi|85688157|gb|EAQ28161.1| GTP-binding protein [Erythrobacter sp. NAP1] Length = 229 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 90/194 (46%), Positives = 116/194 (59%), Gaps = 3/194 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ LP PE+AF GRSNVGKSSL+N L RK +AR S PGRTQ LNFF Sbjct: 27 FLLSAPQLKFLPDPICPEVAFCGRSNVGKSSLLNALTGRKAIARASVTPGRTQELNFF-- 84 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D P LVDMPGYG+A+AP K V+ W L+ YL R L +L+D RHG Sbjct: 85 -DVGGEPGGKPLFRLVDMPGYGFAKAPVKVVERWKNLVKSYLRGRPVLARNLVLVDSRHG 143 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ LD+ AV Y+IVLTK DK+ + + K R + A+PE+ TSS Sbjct: 144 LKDVDREMMKMLDEAAVGYRIVLTKTDKIKASELERVANKVADEARKHVAAYPELHLTSS 203 Query: 194 VKRKGIEVLRKAIL 207 K GIE LR A++ Sbjct: 204 EKGMGIEALRAAVV 217 >gi|254509788|ref|ZP_05121855.1| GTP-binding protein [Rhodobacteraceae bacterium KLH11] gi|221533499|gb|EEE36487.1| GTP-binding protein [Rhodobacteraceae bacterium KLH11] Length = 217 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 91/198 (45%), Positives = 119/198 (60%), Gaps = 9/198 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++GV + LP E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N Sbjct: 26 GPSEFVKGVVAMNGLPVPDRLEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEIN 85 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF P + LVD+PGYGYA AP K V+ W L+ +YLS R TLR ++LID Sbjct: 86 FFTQG---------PELYLVDLPGYGYANAPVKVVEKWQRLLKQYLSGRQTLRRAFVLID 136 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHGVK +D ++ LD AV++Q VLTK DK+ ++ L++ + + +P A PE++ Sbjct: 137 SRHGVKPVDAEIMKLLDTSAVTFQCVLTKADKVKAKDQEKVLDQVRASLAKHPAAFPEIV 196 Query: 190 PTSSVKRKGIEVLRKAIL 207 TSS K GI LR I Sbjct: 197 LTSSEKGDGIPTLRSIIA 214 >gi|254475298|ref|ZP_05088684.1| hypothetical protein RR11_1134 [Ruegeria sp. R11] gi|214029541|gb|EEB70376.1| hypothetical protein RR11_1134 [Ruegeria sp. R11] Length = 216 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 88/198 (44%), Positives = 119/198 (60%), Gaps = 9/198 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N Sbjct: 25 GESTFVKGVVAMSGLPDADRMEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEIN 84 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F P + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID Sbjct: 85 YFTQG---------PELYLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLID 135 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K++D ++ LD AV++Q+V+TK DK+ L + + + +P A+PE++ Sbjct: 136 SRHGIKKVDAEIMKLLDSSAVTFQVVMTKADKVKEKDRAAVLSQVREALSKHPAAYPEIV 195 Query: 190 PTSSVKRKGIEVLRKAIL 207 TSS K GI LR I Sbjct: 196 LTSSEKGDGIPTLRAIIA 213 >gi|299132594|ref|ZP_07025789.1| ribosome biogenesis GTP-binding protein YsxC [Afipia sp. 1NLS2] gi|298592731|gb|EFI52931.1| ribosome biogenesis GTP-binding protein YsxC [Afipia sp. 1NLS2] Length = 221 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 100/201 (49%), Positives = 122/201 (60%), Gaps = 2/201 (0%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W F P I LP EIAF+GRSNVGKSSLIN L NR LARTS+ PGRTQ L Sbjct: 19 GDWQFFWASPSIETLPTMQGVEIAFAGRSNVGKSSLINALTNRNGLARTSHTPGRTQELI 78 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF K L P + LVDMPGYGYA APK + SW LI +L R+ L VY+LID Sbjct: 79 FF--KGPGPLDARTPELRLVDMPGYGYASAPKTQIASWTKLIHNFLLGRANLARVYVLID 136 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG K D +V + LDK AVSYQIVLTK D++ +ET+ +R +P A PE++ Sbjct: 137 SRHGFKDADNEVLTTLDKAAVSYQIVLTKADQVKKAALEETMAAMAEKLRKHPAAFPEML 196 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS G+ +R AI++ + Sbjct: 197 VTSSRDGGGMAEMRAAIVKLL 217 >gi|255262598|ref|ZP_05341940.1| ribosome biogenesis GTP-binding protein YsxC [Thalassiobium sp. R2A62] gi|255104933|gb|EET47607.1| ribosome biogenesis GTP-binding protein YsxC [Thalassiobium sp. R2A62] Length = 217 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 120/194 (61%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP E+ F+GRSNVGKS+LIN L RK LAR SN PGRTQ +N+F Sbjct: 30 FVKGVVAMSGLPDPDRIEVCFAGRSNVGKSTLINALTGRKGLARASNTPGRTQEINYFTM 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 90 GEHG---------YLVDLPGYGFANAPLTVVEKWQRLLKQYLSGRQTLRRAFVLIDARHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ S LD AV++Q VLTK DK+ + +++ + + +P A+PE++ TSS Sbjct: 141 VKPVDDEIMSLLDSAAVTFQAVLTKADKVKLKERERIMDQVRGALAKHPAAYPEIVLTSS 200 Query: 194 VKRKGIEVLRKAIL 207 K GI+ LR I Sbjct: 201 EKGDGIKTLRSIIA 214 >gi|149913106|ref|ZP_01901640.1| GTP-binding protein [Roseobacter sp. AzwK-3b] gi|149813512|gb|EDM73338.1| GTP-binding protein [Roseobacter sp. AzwK-3b] Length = 216 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 91/194 (46%), Positives = 121/194 (62%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKSSLIN L RK +AR SN PGRTQ +NFF Sbjct: 29 FLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGRKAIARASNTPGRTQEINFFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA AP V +W L+ +YLS R +LR ++L+D RHG Sbjct: 89 GESH---------YLVDLPGYGYANAPLDKVAAWQALLKKYLSGRQSLRRAFVLVDTRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ S LD AV++Q VLTK DK+ + LE+ + + +P A+PE+I TSS Sbjct: 140 IKSVDEEIMSLLDSSAVTFQCVLTKADKVKDKDREAVLEQVRAKLAKHPAAYPEIIMTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 200 EKGDGIATLRAVIA 213 >gi|323703639|ref|ZP_08115282.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum nigrificans DSM 574] gi|323531411|gb|EGB21307.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum nigrificans DSM 574] Length = 197 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 104/197 (52%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G P PE+AF GRSNVGKSSLIN LVNR+ LA+TS+ PGRTQ +NFF Sbjct: 8 FVTSAVNPGGYPPEDLPEVAFVGRSNVGKSSLINKLVNRRGLAKTSSTPGRTQLINFFKV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A+ P+ WG +I YL R +L+ V+ L+DCRH Sbjct: 68 NNR---------FLLVDLPGYGFAKVPETVRAKWGQMIEGYLKNRESLKGVFQLVDCRHT 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D+ ++ +L V +V TK+DKLS + K + P +I S+ Sbjct: 119 PTVQDRQMYEWLLHYQVPTVVVATKVDKLSNNQWAKQQAVIKKTLSLAPEHL--LIAFSA 176 Query: 194 VKRKGIEVLRKAILETI 210 +G + L + I + Sbjct: 177 ETGRGRDELLQVISHWV 193 >gi|99080146|ref|YP_612300.1| ribosome biogenesis GTP-binding protein YsxC [Ruegeria sp. TM1040] gi|119369260|sp|Q1GJX8|ENGB_SILST RecName: Full=Probable GTP-binding protein EngB gi|99036426|gb|ABF63038.1| GTP-binding [Ruegeria sp. TM1040] Length = 216 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 91/194 (46%), Positives = 122/194 (62%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +NFF Sbjct: 29 FLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINFFTQ 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 G---------PELYLVDLPGYGYANAPLAVVEKWQRLLKQYLSGRQTLRRAFVLIDTRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ LD AV++Q+V+TK DK+ + L++ + + +P A+PE++ TSS Sbjct: 140 VKKVDEEIMKLLDTSAVTFQVVMTKADKVKEKDRAKILDQVRDALSKHPAAYPEIVLTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 200 EKGDGIATLRSIIA 213 >gi|209886641|ref|YP_002290498.1| GTP-binding protein [Oligotropha carboxidovorans OM5] gi|229813297|sp|B6JJN9|ENGB_OLICO RecName: Full=Probable GTP-binding protein EngB gi|209874837|gb|ACI94633.1| GTP-binding protein [Oligotropha carboxidovorans OM5] Length = 221 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 100/201 (49%), Positives = 122/201 (60%), Gaps = 2/201 (0%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W F P I LP EIA +GRSNVGKSSLIN L R LARTS+ PGRTQ L Sbjct: 19 GDWQFFWASPSIETLPPMQGIEIALAGRSNVGKSSLINALTGRNALARTSHTPGRTQELI 78 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF K L P + LVDMPGYGYA APK + SW LI RYL R+ L VY+LID Sbjct: 79 FF--KGPGPLDAQTPELRLVDMPGYGYASAPKTKIASWTTLIHRYLLGRANLARVYVLID 136 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG K D +V + LDK AVSYQIVLTK D++ + ET+ +R +P A+PE++ Sbjct: 137 SRHGFKDADDEVLTTLDKSAVSYQIVLTKTDQVKKSALDETMAAMAEKLRKHPAAYPEML 196 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS G+ +R AI++ + Sbjct: 197 VTSSRDGAGMAEMRAAIVKLL 217 >gi|77464647|ref|YP_354151.1| ribosome biogenesis GTP-binding protein YsxC [Rhodobacter sphaeroides 2.4.1] gi|119369248|sp|Q3IYY4|ENGB_RHOS4 RecName: Full=Probable GTP-binding protein EngB gi|77389065|gb|ABA80250.1| Probable GTP-binding protein [Rhodobacter sphaeroides 2.4.1] Length = 217 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 93/198 (46%), Positives = 129/198 (65%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +N+F Sbjct: 30 FVKGVTTMEALPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINYFAL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P+ LVD+PGYGYA APK V W L+ YL+ R TLR ++LID RHG Sbjct: 90 G---------PSRYLVDLPGYGYAEAPKPIVQRWQRLLKGYLAGRQTLRRAFVLIDTRHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q+V+TK DK+S + L++ + ++ +P A+PE++ TSS Sbjct: 141 VKSVDEEILTLLDRSAVTFQVVMTKADKVSQAEREAVLDQVRGALKKHPAAYPELVMTSS 200 Query: 194 VKRKGIEVLRKAILETIN 211 K GIE LR I+ T+ Sbjct: 201 EKGMGIETLR-TIVATLG 217 >gi|126737053|ref|ZP_01752788.1| GTP-binding protein [Roseobacter sp. SK209-2-6] gi|126721638|gb|EBA18341.1| GTP-binding protein [Roseobacter sp. SK209-2-6] Length = 216 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 91/194 (46%), Positives = 123/194 (63%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP+A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMSGLPEADRMEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYFTQ 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ RYLS R TLR ++LID RHG Sbjct: 89 G---------PDLFLVDLPGYGYANAPLPVVEKWQKLLKRYLSGRQTLRRAFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ LD AV++Q V+TK DK+ ++ LE+ + + +P A+PE++ TSS Sbjct: 140 VKEVDEEIMKLLDSAAVTFQCVMTKADKVKVKDREKVLEQVRKALARHPAAYPEIVLTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 200 EKGDGIATLRALIA 213 >gi|256819259|ref|YP_003140538.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga ochracea DSM 7271] gi|256580842|gb|ACU91977.1| GTP-binding protein HSR1-related [Capnocytophaga ochracea DSM 7271] Length = 200 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 105/202 (51%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ ++ PK PE AF GRSNVGKSSLIN+L N KNLA+TS PG+TQ +N Sbjct: 3 KKAEFVMSNSQVSKCPKDNLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + + LVD+PGYGYAR K+ + I +Y ER L C ++L+D Sbjct: 63 HFKIDN---------SWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVD 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID + +L + + + IV TK DKL P + + + ++ P Sbjct: 114 VRHEPQKIDVEFMQWLGEHGIPFAIVFTKADKLKPLAIERNIAAYQQVLLETWEEFPPYF 173 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TS+ + G E L I E IN Sbjct: 174 ITSAENKTGKEELTHYI-EQIN 194 >gi|114765425|ref|ZP_01444540.1| GTP-binding protein [Pelagibaca bermudensis HTCC2601] gi|114542268|gb|EAU45298.1| GTP-binding protein [Roseovarius sp. HTCC2601] Length = 217 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 88/194 (45%), Positives = 121/194 (62%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP E+ F+GRSNVGKSSLIN L RK +AR SN PGRTQ +NFF Sbjct: 30 FLKGVVGMDGLPPDDRVEVCFAGRSNVGKSSLINALTGRKGIARASNTPGRTQEINFFTL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A AP V+ W L+ +YLS R +LR ++LID RHG Sbjct: 90 GEER---------YLVDLPGYGFANAPVAVVEKWQRLLKQYLSGRVSLRRAFVLIDARHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q VLTK DK+ ++ L + + + +P A PE++ TSS Sbjct: 141 VKPVDEEIMTLLDRSAVTFQAVLTKADKVKEKGREKVLAQVREKLAKHPAAFPELVLTSS 200 Query: 194 VKRKGIEVLRKAIL 207 K GI +LR I Sbjct: 201 EKGDGIALLRAIIA 214 >gi|332878394|ref|ZP_08446117.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683659|gb|EGJ56533.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 200 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 103/200 (51%), Gaps = 9/200 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ ++ PK PE AF GRSNVGKSSLIN+L N KNLA+TS PG+TQ +N Sbjct: 3 KKAEFVMSNSQVAKCPKDRLPEYAFIGRSNVGKSSLINMLTNCKNLAKTSGRPGKTQLIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F D LVD+PGYGYAR K + I Y +R L ++L+D Sbjct: 63 HFKIDDR---------WFLVDLPGYGYARVSKTTKQVFQRFITDYFEQREQLVSAFVLVD 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID + +L ++A+ + I+ TK DKL P + + K + + P Sbjct: 114 IRHEPQKIDVEFMQWLGERAIPFAIIFTKADKLKPQAIERNVAAYKEALLEWWEEFPPYF 173 Query: 190 PTSSVKRKGIEVLRKAILET 209 TS+ + G E L + I +T Sbjct: 174 VTSAQNKTGKEELTQYIEQT 193 >gi|260427039|ref|ZP_05781018.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. SE45] gi|260421531|gb|EEX14782.1| ribosome biogenesis GTP-binding protein YsxC [Citreicella sp. SE45] Length = 217 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 89/194 (45%), Positives = 123/194 (63%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 30 FLKGVVAMDGLPPDDRTEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINFFTL 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A AP V+ W L+ +YLS R++LR ++LID RHG Sbjct: 90 GEER---------YLVDLPGYGFANAPVAVVEKWQRLLKQYLSGRASLRRAFVLIDSRHG 140 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q VLTK DK+ ++ L++ + + +P A+PE++ TSS Sbjct: 141 VKAVDEEIMTLLDRSAVTFQAVLTKSDKIREKEREKVLDQVREKLSKHPAAYPELVLTSS 200 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 201 EKGDGIATLRAIIA 214 >gi|86135822|ref|ZP_01054401.1| GTP-binding protein [Roseobacter sp. MED193] gi|85826696|gb|EAQ46892.1| GTP-binding protein [Roseobacter sp. MED193] Length = 216 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 91/197 (46%), Positives = 121/197 (61%), Gaps = 9/197 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +F++GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N Sbjct: 25 GESLFVKGVVAMSGLPDADRMEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEIN 84 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F P + LVD+PGYGYA AP V+ W L+ RYLS R TLR ++LID Sbjct: 85 YFTQG---------PELYLVDLPGYGYANAPLAVVEKWQKLLKRYLSGRQTLRRAFVLID 135 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHGVK +D+++ S LD AV++Q V+TK DK+ +E+ + + +P A+PE++ Sbjct: 136 SRHGVKDVDEEIMSLLDSSAVTFQCVMTKADKVKIKDRDRVIEQVRTALARHPAAYPEIV 195 Query: 190 PTSSVKRKGIEVLRKAI 206 TSS K GI LR I Sbjct: 196 LTSSEKGDGIATLRSII 212 >gi|90422336|ref|YP_530706.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris BisB18] gi|119369245|sp|Q21B49|ENGB_RHOPB RecName: Full=Probable GTP-binding protein EngB gi|90104350|gb|ABD86387.1| GTP-binding [Rhodopseudomonas palustris BisB18] Length = 216 Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats. Identities = 99/201 (49%), Positives = 126/201 (62%), Gaps = 7/201 (3%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTS+ PGRTQ L Sbjct: 19 GDWQFIWASPSIETLPPMAGLEVAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELI 78 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + +N LVDMPGYGYA APK + SW LI +L RSTL VY+LID Sbjct: 79 FFEGPENAN-------FRLVDMPGYGYASAPKAKIASWTSLIHNFLQGRSTLARVYVLID 131 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K++DQDV + LDK AVSYQ+VLTK D++ P + + +R +P A+PE++ Sbjct: 132 ARHGLKEVDQDVLNTLDKSAVSYQVVLTKADQVKPAELAQCRIDVEAGLRKHPAAYPELL 191 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS G+ LR A+++ I Sbjct: 192 VTSSRTGAGMPELRAAMIKLI 212 >gi|83854935|ref|ZP_00948465.1| GTP-binding protein [Sulfitobacter sp. NAS-14.1] gi|83941458|ref|ZP_00953920.1| GTP-binding protein [Sulfitobacter sp. EE-36] gi|83842778|gb|EAP81945.1| GTP-binding protein [Sulfitobacter sp. NAS-14.1] gi|83847278|gb|EAP85153.1| GTP-binding protein [Sulfitobacter sp. EE-36] Length = 216 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 91/195 (46%), Positives = 122/195 (62%), Gaps = 9/195 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F++GV + LP A E+ F+GRSNVGKS+LIN L K LAR SN PGRTQ +N+F Sbjct: 28 LFVKGVVAMDGLPPADRMEVCFAGRSNVGKSTLINALTGTKALARASNTPGRTQEINYFT 87 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RH Sbjct: 88 AAD---------DHYLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDARH 138 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 GVK++D ++ S LD AV++Q VLTK DK+ Q+ L++ + + +P A+PE++ TS Sbjct: 139 GVKKVDDEIMSLLDSSAVTFQCVLTKADKVKEVERQKVLDQVRGALAKHPAAYPEIVVTS 198 Query: 193 SVKRKGIEVLRKAIL 207 S K GI LR I Sbjct: 199 SEKGWGIPTLRAIIA 213 >gi|197103855|ref|YP_002129232.1| GTP-binding protein CgpA [Phenylobacterium zucineum HLK1] gi|196477275|gb|ACG76803.1| GTP-binding protein CgpA [Phenylobacterium zucineum HLK1] Length = 213 Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats. Identities = 95/209 (45%), Positives = 119/209 (56%), Gaps = 10/209 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F FL G I LP PE+AF+GRSNVGKSSLIN + RK+LAR SN Sbjct: 13 AARVLFA-HPVRFLMGAVAISGLPDPDLPEVAFAGRSNVGKSSLINAVTGRKDLARASNE 71 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+ +NFFV + + LVD+PGYG+ARA K + L YL R L Sbjct: 72 PGRTREVNFFVADE---------KLRLVDLPGYGWARASKSVARKFQNLGRDYLRGRPNL 122 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + VYLLID RHG+K +D++ LD AVSYQIVLTK DKL ++ + +T + Sbjct: 123 KRVYLLIDARHGLKDVDKEALDALDVAAVSYQIVLTKADKLRAAEVEKVVAETLQKVSKR 182 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETI 210 P A P V+ TSS K GI LR IL Sbjct: 183 PAAFPRVLATSSEKGTGIPELRAEILAAC 211 >gi|27383210|ref|NP_774739.1| ribosome biogenesis GTP-binding protein YsxC [Bradyrhizobium japonicum USDA 110] gi|81734112|sp|Q89BP9|ENGB_BRAJA RecName: Full=Probable GTP-binding protein EngB gi|27356384|dbj|BAC53364.1| GTP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 217 Score = 243 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 95/205 (46%), Positives = 125/205 (60%), Gaps = 8/205 (3%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + W F+ P I LP EIAF+GRSNVGKSSLIN L R LARTS+ PGRT Sbjct: 16 LFAR-DWQFIWASPSIQTLPPMDGVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRT 74 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q L FF + LVDMPGYGYA+APK V SW LI ++L R++L VY Sbjct: 75 QELIFFEVP-------GKKDLRLVDMPGYGYAKAPKSQVASWTELIHKFLLGRASLARVY 127 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K +D ++ LD+ AVSYQIVLTK D++ P+ + +T+ + +P A Sbjct: 128 VLIDARHGLKDVDLEILGTLDRSAVSYQIVLTKADQVKPSELASRIAETEAALAKHPAAF 187 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 P V+ TSS G+ LR A+ + + Sbjct: 188 PNVLATSSRSATGMAELRAAMAKLL 212 >gi|217977386|ref|YP_002361533.1| ribosome biogenesis GTP-binding protein YsxC [Methylocella silvestris BL2] gi|217502762|gb|ACK50171.1| GTP-binding protein HSR1-related [Methylocella silvestris BL2] Length = 226 Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 93/201 (46%), Positives = 121/201 (60%), Gaps = 4/201 (1%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + FL + LP G PEIAF+GRSNVGKSSL+N L NRK+LARTS+ PGRT+ LN Sbjct: 25 AECDFLWAASSVASLPPPGAPEIAFAGRSNVGKSSLLNALTNRKSLARTSHTPGRTRELN 84 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + + LVDMPGYGYA A K+ + SW L+ YL R+ L ++LID Sbjct: 85 FFGLGGGI----DDARLRLVDMPGYGYAAASKEQIASWTQLMQDYLRGRAPLLRAFVLID 140 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K D ++ LD+ A+SYQIVLTK D++ A +E+T I P A+P+ I Sbjct: 141 GRHGLKPPDYEMMDLLDRCALSYQIVLTKQDEVKEADAARRIEETLKAIEKRPAAYPQAI 200 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS G+ LR AI + Sbjct: 201 FTSSRTADGVAELRAAIARLL 221 >gi|253575676|ref|ZP_04853012.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. oral taxon 786 str. D14] gi|251845014|gb|EES73026.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. oral taxon 786 str. D14] Length = 214 Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 107/196 (54%), Gaps = 11/196 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ P+ PEIA +GRSNVGKSSLIN ++NRKNLARTS+ PG+TQHLN+ Sbjct: 5 KAEFIISAVGPNQYPEDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQHLNY 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + D + VD+PGYGYA+ K + WG +I +YL ER TL+ V +ID Sbjct: 65 YRVNDR---------LYFVDVPGYGYAKVSKSQREVWGKMIEKYLQERETLKLVLQIIDL 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D+ ++ +L + +V TK DK+ + Q+ L+ K + A +I Sbjct: 116 RHPPTKDDELMYDWLKAYELPVCVVATKADKVPKSRWQKHLKIIKEALVLR--AGDPLIL 173 Query: 191 TSSVKRKGIEVLRKAI 206 S+ + G + L I Sbjct: 174 FSAEEGIGKDELWAQI 189 >gi|163745581|ref|ZP_02152941.1| GTPase EngB [Oceanibulbus indolifex HEL-45] gi|161382399|gb|EDQ06808.1| GTPase EngB [Oceanibulbus indolifex HEL-45] Length = 216 Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 91/205 (44%), Positives = 122/205 (59%), Gaps = 9/205 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + F++GV + LP E+ F+GRSNVGKS+LIN L K LAR SN PGRT Sbjct: 21 LLFAGETTFVKGVVAMDGLPPPDRMEVCFAGRSNVGKSTLINALTGMKALARASNTPGRT 80 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q +NFF + LVD+PGYGYA AP V+ W L+ +YLS R TLR + Sbjct: 81 QEINFFTAGEEH---------YLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAF 131 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHGVK++D ++ S LD AV++Q+VLTK DK+ + LE+ K + +P A+ Sbjct: 132 VLIDARHGVKKVDNEIMSLLDSSAVTFQVVLTKGDKVKEAERTKILEQVKEALSKHPAAY 191 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE++ TSS K GI LR I + Sbjct: 192 PEIVVTSSEKGWGIPTLRAIIATLV 216 >gi|326386368|ref|ZP_08207991.1| GTPase EngB [Novosphingobium nitrogenifigens DSM 19370] gi|326209029|gb|EGD59823.1| GTPase EngB [Novosphingobium nitrogenifigens DSM 19370] Length = 221 Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 91/195 (46%), Positives = 121/195 (62%), Gaps = 7/195 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P + +P PEIAF+GRSNVGKSSLIN + RK++AR S PGRTQ LN+F Sbjct: 30 FLKSAPSLQFIPDPEEPEIAFAGRSNVGKSSLINAITGRKSIARASVTPGRTQELNWFEV 89 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N ++ LVDMPGYG+A+AP K V+ W L+ +L R+ L+ LLID RHG Sbjct: 90 G-------NPTSIRLVDMPGYGFAKAPPKVVEQWRRLVRDFLRGRTVLKRTLLLIDARHG 142 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ LD+ AV Y++VLTK DK+ T+ + R + A+P V+ TS+ Sbjct: 143 VKPVDVEMMQMLDEAAVGYRLVLTKADKIKAEELAAVHAATEAVARKHIAAYPGVLVTSA 202 Query: 194 VKRKGIEVLRKAILE 208 KR GI LR AILE Sbjct: 203 EKRSGIAALRAAILE 217 >gi|260577137|ref|ZP_05845114.1| GTP-binding protein HSR1-related protein [Rhodobacter sp. SW2] gi|259020611|gb|EEW23930.1| GTP-binding protein HSR1-related protein [Rhodobacter sp. SW2] Length = 216 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 89/194 (45%), Positives = 121/194 (62%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK+LAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMPGLPPADRLEVCFAGRSNVGKSSLINALTGRKSLARASNTPGRTQEINYFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA AP V+ W L+ YL R TLR ++LID RHG Sbjct: 89 G---------TERYLVDLPGYGYAEAPVAVVEKWQRLLKNYLQGRQTLRRAFVLIDTRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD+ AV++Q VLTK DK+S +++ + + +P A+PE++ TS+ Sbjct: 140 VKAVDEEILTLLDRSAVTFQAVLTKADKVSKAERDAIIDQVRGALAKHPAAYPELVVTSA 199 Query: 194 VKRKGIEVLRKAIL 207 K GIE LR I Sbjct: 200 EKGDGIETLRAIIA 213 >gi|146337895|ref|YP_001202943.1| ribosome biogenesis GTP-binding protein YsxC [Bradyrhizobium sp. ORS278] gi|146190701|emb|CAL74705.1| putative GTP-binding protein engB [Bradyrhizobium sp. ORS278] Length = 219 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 98/205 (47%), Positives = 129/205 (62%), Gaps = 8/205 (3%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + AW F P I LP GP EIAF+GRSNVGKSSLIN L + LARTS+ PGRT Sbjct: 18 LFAQ-AWRFTHASPSIASLPPMGPIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGRT 76 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q L FF D + L LVDMPGYGYA A K V SW LI ++L R++L VY Sbjct: 77 QELIFFQGPDSAPL-------RLVDMPGYGYAAAAKTKVASWTELIHQFLLGRASLARVY 129 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K++DQ++ LD+ AVSYQ+VLTK D++ P + +T+ + +P A Sbjct: 130 VLIDARHGLKEVDQEILKTLDRSAVSYQLVLTKADQIKPAELASRIAETETALAKHPAAF 189 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 P+V+ TSS G+ LR A++ + Sbjct: 190 PQVLATSSRSGTGMPELRAAMVRLL 214 >gi|323137576|ref|ZP_08072653.1| ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp. ATCC 49242] gi|322397202|gb|EFX99726.1| ribosome biogenesis GTP-binding protein YsxC [Methylocystis sp. ATCC 49242] Length = 217 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 95/207 (45%), Positives = 123/207 (59%), Gaps = 5/207 (2%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 +F F+ + LP GPPEIAF+GRSNVGKSSL+N L NRK LAR S+ PG Sbjct: 11 RILFA-GPCDFIFASAKPNDLPPLGPPEIAFAGRSNVGKSSLLNALTNRKTLARVSHTPG 69 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ LNFF + + LVDMPGYGYA K+ V SW L+ YL R++L Sbjct: 70 RTQQLNFFALGGAPGAER----LRLVDMPGYGYAAVGKEKVASWSVLMRDYLRGRASLAR 125 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 V++L+D R GVK +D ++F LD+ AVSYQ++LTK D+L E L T + P Sbjct: 126 VFVLVDGRRGVKPVDAEMFDLLDQSAVSYQVILTKHDELKVAERAEVLAATAEALSRRPA 185 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETI 210 A+PE+I TSS +GI LR A+ + Sbjct: 186 AYPEIIFTSSHTGEGIAELRGAVARLL 212 >gi|134300397|ref|YP_001113893.1| ribosome biogenesis GTP-binding protein YsxC [Desulfotomaculum reducens MI-1] gi|172044336|sp|A4J7L5|ENGB_DESRM RecName: Full=Probable GTP-binding protein EngB gi|134053097|gb|ABO51068.1| small GTP-binding protein [Desulfotomaculum reducens MI-1] Length = 205 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 79/201 (39%), Positives = 106/201 (52%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A F+ G P PE+AF GRSNVGKSSLIN +VNRK LA+TS+ PGRTQ +NF Sbjct: 5 AAEFVTSAVNPGGYPPGNLPEVAFVGRSNVGKSSLINKVVNRKGLAKTSSTPGRTQLINF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + +VD+PGYGYA+ P WG +I YL ER L+ V LLID Sbjct: 65 FNINN--------DQFLMVDLPGYGYAKVPTDVRIKWGKMIEGYLKERECLKGVVLLIDS 116 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH D+ ++ +L V +V TK+DKLS + K + + ++I Sbjct: 117 RHTPTAQDKQMYEWLQYYHVPTVVVATKVDKLSNNQWAKQQAVIKKSLP--LSKEHQLIS 174 Query: 191 TSSVKRKGIEVLRKAILETIN 211 S+ +G E L K + E I+ Sbjct: 175 FSAETGRGKEKLLKVLDEFIH 195 >gi|84499799|ref|ZP_00998087.1| GTP-binding protein [Oceanicola batsensis HTCC2597] gi|84392943|gb|EAQ05154.1| GTP-binding protein [Oceanicola batsensis HTCC2597] Length = 216 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 92/194 (47%), Positives = 124/194 (63%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L +NLAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMDGLPPADRMEVCFAGRSNVGKSSLINALTGTRNLARASNTPGRTQEINYFTL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 GDRG---------YLVDLPGYGYANAPLPVVEKWQRLLRQYLSGRQTLRRAFVLIDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+++ S LD AV++++VLTKIDK+ + L+ T+ + +P A+PE++ TSS Sbjct: 140 VKKVDEEIMSLLDSAAVTFEVVLTKIDKVRRSDLDRALDVTRSALSKHPAAYPELVLTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 200 EKGDGIATLRSIIA 213 >gi|114770123|ref|ZP_01447661.1| GTP-binding protein [alpha proteobacterium HTCC2255] gi|114548960|gb|EAU51843.1| GTP-binding protein [alpha proteobacterium HTCC2255] Length = 216 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 94/205 (45%), Positives = 127/205 (61%), Gaps = 10/205 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F++ FL+GV + +P A E+ F+GRSNVGKSSLIN L RK+LARTSN PGRT Sbjct: 22 LFSQPT-DFLKGVVGMDGMPPADRMEVCFAGRSNVGKSSLINALTGRKSLARTSNTPGRT 80 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q +NFF + LVD+PGYG+A AP V W L+ YLS R++LR V+ Sbjct: 81 QEINFFTLSESH---------YLVDVPGYGFANAPLPVVKKWQTLLKAYLSGRASLRRVF 131 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHGVK +D+++ L + AV++Q+VLTK DK ++ + +T ++ YP A+ Sbjct: 132 LLIDSRHGVKSVDEEIMELLGRSAVTFQVVLTKSDKPKKNDLEKVISETGRIVAKYPAAY 191 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE + TSS K GI LR I I Sbjct: 192 PEFVLTSSEKGDGIPTLRHIIRTLI 216 >gi|254487465|ref|ZP_05100670.1| GTP-binding protein [Roseobacter sp. GAI101] gi|214044334|gb|EEB84972.1| GTP-binding protein [Roseobacter sp. GAI101] Length = 216 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 89/202 (44%), Positives = 122/202 (60%), Gaps = 9/202 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + F++GV + LP A E+ F+GRSNVGKS+LIN L K LAR SN PGRT Sbjct: 21 LLFAGETQFVKGVVAMDGLPPADRMEVCFAGRSNVGKSTLINALTGMKALARASNTPGRT 80 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q +N+F + LVD+PGYGYA AP V+ W L+ +YLS R TLR + Sbjct: 81 QEINYFTAGE---------DHYLVDLPGYGYANAPLPIVEKWQRLLKQYLSGRQTLRRAF 131 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHGVK++D+++ S LD AV++Q VLTK DK+ + L++ + + +P A+ Sbjct: 132 VLIDARHGVKKVDEEIMSLLDSSAVTFQCVLTKADKVKEVERAKILDQVRGALAKHPAAY 191 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 PE++ TSS K GI LR I Sbjct: 192 PEIVVTSSEKGWGIPTLRAIIA 213 >gi|242241360|ref|YP_002989541.1| ribosome biogenesis GTP-binding protein YsxC [Dickeya dadantii Ech703] gi|242133417|gb|ACS87719.1| GTP-binding protein HSR1-related [Dickeya dadantii Ech703] Length = 220 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 109/205 (53%), Gaps = 10/205 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ Sbjct: 15 YNYHVTHFVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQ 74 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F + + LVD+PGYGYA P++ W + YL +R+ L+ + + Sbjct: 75 LINLFEVTE---------GIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRNCLKGLVI 125 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + + + ++LTK DKL+ + L + + + Sbjct: 126 LMDIRHPLKDLDQQMLEWSVDVGLPVLVLLTKADKLAQGARKAQLNMVREAVLPF-MGDI 184 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 +V SS+K+ G++ LR+ + N Sbjct: 185 QVETFSSLKKTGVDKLRQKLDTWFN 209 >gi|213963255|ref|ZP_03391512.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sputigena Capno] gi|213954117|gb|EEB65442.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sputigena Capno] Length = 201 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 105/202 (51%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ ++ PK PE AF GRSNVGKSSLIN+L N KNLA+TS PG+TQ +N Sbjct: 3 KKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + + LVD+PGYGYAR K+ + I +Y ER L C ++L+D Sbjct: 63 HFKIDN---------SWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVD 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID + +L + + + IV TK DKL P + + + ++ P Sbjct: 114 VRHEPQKIDVEFMQWLGEHGIPFAIVFTKADKLKPLVIERNIAAYQQVLLETWEEFPPYF 173 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TS+ + G E L I E IN Sbjct: 174 VTSAENKTGKEELTHYI-EQIN 194 >gi|260432490|ref|ZP_05786461.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter lacuscaerulensis ITI-1157] gi|260416318|gb|EEX09577.1| ribosome biogenesis GTP-binding protein YsxC [Silicibacter lacuscaerulensis ITI-1157] Length = 214 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 90/200 (45%), Positives = 119/200 (59%), Gaps = 9/200 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++GV + LP E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N Sbjct: 23 GPSEFVKGVVAMNGLPAPDRLEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEIN 82 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF P + LVD+PGYGYA AP K V+ W L+ +YLS R TLR ++LID Sbjct: 83 FFTQG---------PDLYLVDLPGYGYANAPVKVVEKWQRLLKQYLSGRQTLRRAFVLID 133 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHGVK +D ++ LD AV++Q V+TK DK+ ++ L + + + +P A+PE++ Sbjct: 134 SRHGVKPVDDEIMKLLDTSAVTFQCVMTKADKVKAKDREKVLGQVRGALSKHPAAYPEIV 193 Query: 190 PTSSVKRKGIEVLRKAILET 209 TSS K GI LR I Sbjct: 194 LTSSEKGDGIPTLRSIIANL 213 >gi|251791717|ref|YP_003006438.1| ribosome biogenesis GTP-binding protein YsxC [Dickeya zeae Ech1591] gi|247540338|gb|ACT08959.1| GTP-binding protein HSR1-related [Dickeya zeae Ech1591] Length = 214 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LAR S PGRTQ +N F Sbjct: 12 FVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARISKTPGRTQLINLFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 72 TD---------GVRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRNCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 123 LKDLDQQMLEWAVDVGLPVLVLLTKADKLAQGARKSQLNMVREAVLPF-MGDIQVETFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K+ G++ LR+ + Sbjct: 182 LKKTGVDKLRQKLDNW 197 >gi|83950485|ref|ZP_00959218.1| GTP-binding protein [Roseovarius nubinhibens ISM] gi|83838384|gb|EAP77680.1| GTP-binding protein [Roseovarius nubinhibens ISM] Length = 216 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 93/197 (47%), Positives = 119/197 (60%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FLKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEVNFFTM 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA AP V W L+ YLS R+ LR ++LID RHG Sbjct: 89 ADSH---------YLVDLPGYGYANAPLPIVAKWQALLKSYLSGRANLRRAFVLIDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D+++ + LD AV++Q VLTK DK+ ++ L + + + +P A PE+I TSS Sbjct: 140 VKAVDEEIMALLDSSAVTFQTVLTKADKVKEAEREKILTQVRSRLATHPAAFPELIVTSS 199 Query: 194 VKRKGIEVLRKAILETI 210 K GI LR I + Sbjct: 200 EKGWGIPTLRATIASLV 216 >gi|329848428|ref|ZP_08263456.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis biprosthecum C19] gi|328843491|gb|EGF93060.1| ribosome biogenesis GTP-binding protein YsxC [Asticcacaulis biprosthecum C19] Length = 215 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 92/201 (45%), Positives = 121/201 (60%), Gaps = 10/201 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F ++A F+ G ++ LP PE+AF+GRSNVGKSSLIN +V K LAR SN PGRT Sbjct: 17 LFARAA-TFVMGAAKVEQLPDTSQPEVAFAGRSNVGKSSLINAVVGMKALARASNEPGRT 75 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + +NFF + LVD+PGYG+A+A K V + L YL R L+ Y Sbjct: 76 REVNFFNVN---------GQLHLVDLPGYGWAKASKVTVKKFQNLGRDYLRGRPNLKRAY 126 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K++D++ LD AVSYQIVLTK DK+ P + +E T+ ++ P AH Sbjct: 127 LLIDARHGLKEVDKEPMDALDVAAVSYQIVLTKADKIKPAELAKVIEATQAGVKKRPAAH 186 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P V+ TSS GI LR I Sbjct: 187 PLVLATSSETGFGIAELRAEI 207 >gi|307128782|ref|YP_003880798.1| GTP-binding protein [Dickeya dadantii 3937] gi|306526311|gb|ADM96241.1| GTP-binding protein [Dickeya dadantii 3937] Length = 275 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 107/203 (52%), Gaps = 10/203 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ Sbjct: 66 YNYHVTHFVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQ 125 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D + LVD+PGYGYA P++ W + YL +R L+ + + Sbjct: 126 LINLFEVAD---------GVRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRDCLKGLVV 176 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + + + ++LTK DKL+ + L + + + Sbjct: 177 LMDIRHPLKDLDQQMLEWAVDVGLPVLVLLTKADKLAQGARKSQLNMVREAVLPF-MGDI 235 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 +V SS+K+ G++ LR+ + Sbjct: 236 QVEAFSSLKKTGVDKLRQKLDSW 258 >gi|126724908|ref|ZP_01740751.1| GTP-binding protein [Rhodobacterales bacterium HTCC2150] gi|126706072|gb|EBA05162.1| GTP-binding protein [Rhodobacterales bacterium HTCC2150] Length = 216 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 89/197 (45%), Positives = 123/197 (62%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + +P A E+ F+GRSNVGKS+LIN L RK LARTSN PGRTQ +NFF Sbjct: 29 FLKGVVAMDGMPPADRLEVCFAGRSNVGKSTLINALTGRKALARTSNTPGRTQEINFFTV 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A+AP V W L+ YLS R LR ++LID RHG Sbjct: 89 AESH---------YLVDLPGYGFAKAPLPTVKKWQALLKAYLSGRQNLRRAFVLIDFRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ L+ AV++Q++LTK DK+ ++ L +T+ + +P A+PE++ TSS Sbjct: 140 VKDVDDEIMQLLNSSAVTFQVILTKADKVKEADREKILAQTRAALAKHPAAYPEILVTSS 199 Query: 194 VKRKGIEVLRKAILETI 210 K +GIE LR + I Sbjct: 200 EKGEGIENLRSIVNTLI 216 >gi|146313732|ref|YP_001178806.1| cell division checkpoint GTPase YihA [Enterobacter sp. 638] gi|166920112|sp|A4WGC5|ENGB_ENT38 RecName: Full=Probable GTP-binding protein EngB gi|145320608|gb|ABP62755.1| cell division checkpoint GTPase YihA [Enterobacter sp. 638] Length = 208 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+++LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPPDTGIEVAFAGRSNAGKSSALNTLTNQRSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 AEGK---------RLVDLPGYGYAEVPEEVKLKWQKALGEYLEKRQCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L+ + + ++ SS Sbjct: 122 LKDLDQQMIHWAVASEIPVLVLLTKSDKLASGARKAQLKMVREAALAF-NGDVQIETFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 +K++G++VLR+ + N Sbjct: 181 LKKQGVDVLRQKLDSWYN 198 >gi|294634244|ref|ZP_06712787.1| ribosome biogenesis GTP-binding protein YsxC [Edwardsiella tarda ATCC 23685] gi|291092331|gb|EFE24892.1| ribosome biogenesis GTP-binding protein YsxC [Edwardsiella tarda ATCC 23685] Length = 254 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 ++ + F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS Sbjct: 37 LARQTYNYHVTHFVTSAPDIRHLPADIGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKT 96 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F D + LVD+PGYGYA P++ W + YL +R L Sbjct: 97 PGRTQLINLFEVDD---------GVRLVDLPGYGYAEVPEEMKRKWQRALGEYLQQRQCL 147 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + + +L+D RH +K +DQ + ++ + + ++LTK DKL+ + L + + + Sbjct: 148 KGLVVLMDIRHPLKDLDQQMIAWAVEAGLPVLLLLTKADKLASGARKAQLNLVREAVLPF 207 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V SS+K+ G++ LR + Sbjct: 208 -MGDIQVEAFSSLKKFGVDKLRDKL 231 >gi|332978063|gb|EGK14801.1| ribosome biogenesis GTP-binding protein YsxC [Desmospora sp. 8437] Length = 200 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 105/197 (53%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P PEIA +GRSNVGKSSLIN L++RKNLARTS+ PG+TQ +NF+ Sbjct: 8 FVISAVGPAQYPADALPEIALAGRSNVGKSSLINRLIHRKNLARTSSKPGKTQTINFYRI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 A+ DMPGYG+A+ PK +WG +I YLS R LR V +ID RH Sbjct: 68 N---------GALFFADMPGYGFAKVPKSVKAAWGRMIEGYLSNRDELRGVIQVIDVRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ +L + IV TK DK+ Q+ L++ + +R A +I S+ Sbjct: 119 PTRDDVAMYEWLKHYRMPTMIVATKADKIPRGRWQKHLKQVREGLR--LEAGVPLILFSA 176 Query: 194 VKRKGIEVLRKAILETI 210 +G E + I + + Sbjct: 177 QTGQGKEEVWAEIRKWM 193 >gi|163740283|ref|ZP_02147677.1| GTP-binding protein [Phaeobacter gallaeciensis 2.10] gi|161386141|gb|EDQ10516.1| GTP-binding protein [Phaeobacter gallaeciensis 2.10] Length = 216 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 88/194 (45%), Positives = 120/194 (61%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYFTQ 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 G---------PELYLVDLPGYGYANAPLPVVEKWQRLLKQYLSGRQTLRRAFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D ++ + LD AV++Q V+TK DK+ +E+ + + +P A+PE++ TSS Sbjct: 140 IKKVDDEIMTRLDSSAVTFQCVMTKADKVKDKDRAVVMEQVRSALSKHPAAYPEIVMTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 200 EKGDGIATLRSIIA 213 >gi|154244318|ref|YP_001415276.1| ribosome biogenesis GTP-binding protein YsxC [Xanthobacter autotrophicus Py2] gi|154158403|gb|ABS65619.1| small GTP-binding protein [Xanthobacter autotrophicus Py2] Length = 217 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 90/206 (43%), Positives = 121/206 (58%), Gaps = 9/206 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + W F+ P + +LP EIA +GRSNVGKSSL+N L RK LARTS PGRT Sbjct: 18 LLFAGDWQFVTAAPTVEVLPPMVGMEIALAGRSNVGKSSLVNALTGRKALARTSVTPGRT 77 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q L FF P ++LVDMPGYG+A+APK+ V++W I YL R L V+ Sbjct: 78 QELIFFRVG---------PELSLVDMPGYGFAKAPKEKVEAWTHTIKAYLRGRVNLARVF 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K +D+++ LDK AVSY I+LTK D++ P+ + + I+ P A+ Sbjct: 129 VLIDSRHGIKPVDEEILDLLDKAAVSYAIILTKSDQVKPSALPHVIASVQEKIKRRPAAY 188 Query: 186 PEVIPTSSVKRKGIEVLRKAILETIN 211 P V PTSS G LR A+ ++ Sbjct: 189 PVVFPTSSQTGAGFPELRAAVARLLH 214 >gi|269140842|ref|YP_003297543.1| GTPase [Edwardsiella tarda EIB202] gi|267986503|gb|ACY86332.1| GTPase [Edwardsiella tarda EIB202] gi|304560601|gb|ADM43265.1| GTP-binding protein EngB [Edwardsiella tarda FL6-60] Length = 217 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 ++ + F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS Sbjct: 1 MARQTYNYHVTHFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F +D + LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEVED---------GIRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRQCL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + + +L+D RH +K +DQ + ++ + + ++LTK DKL+ + L + + + Sbjct: 112 KGLVVLMDIRHPLKDLDQQMIAWAVEAGLPVLLLLTKADKLASGARKAQLNMVREAVLPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V SS+K+ G++ LR + Sbjct: 172 -MGDIQVDAFSSLKKFGVDKLRDKL 195 >gi|83594669|ref|YP_428421.1| ribosome biogenesis GTP-binding protein YsxC [Rhodospirillum rubrum ATCC 11170] gi|119369247|sp|Q2RP11|ENGB_RHORT RecName: Full=Probable GTP-binding protein EngB gi|83577583|gb|ABC24134.1| GTP-binding [Rhodospirillum rubrum ATCC 11170] Length = 231 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 95/187 (50%), Positives = 115/187 (61%), Gaps = 4/187 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G + LP EIAF+GRSNVGKSSL+N L RK LARTSN PGRTQ LN+F Sbjct: 37 FVMGCVSLDTLPDHDLSEIAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQELNYFRL 96 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + PA+ +VD+PGYG+A APK V W LI+ YL R LR V LLID RHG Sbjct: 97 ----GPEAQDPALMMVDLPGYGFAEAPKDAVKRWTRLIMAYLRGRPALRRVCLLIDSRHG 152 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+DV LD+ AVSYQIVLTK DKL + L + + AHP+VI TSS Sbjct: 153 IKENDRDVMRMLDEAAVSYQIVLTKADKLKAAEITDVLARVVAETAKHVAAHPDVIVTSS 212 Query: 194 VKRKGIE 200 GI+ Sbjct: 213 QSGAGID 219 >gi|315224700|ref|ZP_07866523.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga ochracea F0287] gi|314945328|gb|EFS97354.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga ochracea F0287] Length = 201 Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 106/202 (52%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ ++ PK PE AF GRSNVGKSSLIN+L N KNLA+TS PG+TQ +N Sbjct: 3 KKAEFVMSNSQVSKCPKENLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSGRPGKTQLIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + + LVD+PGYGYAR K+ + I +Y ER L C ++L+D Sbjct: 63 HFKIDN---------SWFLVDLPGYGYARVSKETKKVFQQFITKYFEERQQLVCAFVLVD 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID + +L + ++ + IV TK DKL P + + + ++ P Sbjct: 114 VRHEPQKIDVEFMQWLGEHSIPFAIVFTKADKLKPLAIERNIAAYQQVLLETWEEFPPYF 173 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TS+ + G E L I E IN Sbjct: 174 VTSAENKTGKEELTHYI-EQIN 194 >gi|149203000|ref|ZP_01879971.1| GTP-binding protein [Roseovarius sp. TM1035] gi|149143546|gb|EDM31582.1| GTP-binding protein [Roseovarius sp. TM1035] Length = 216 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 90/194 (46%), Positives = 121/194 (62%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINFFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA AP V W L+ +YLS R TLR ++L+D RHG Sbjct: 89 GESH---------YLVDLPGYGYANAPLAVVQKWQALLKQYLSGRQTLRRAFVLVDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ S LD AV++Q VLTK DK++ L++ + + +P A+PE+I TSS Sbjct: 140 IKTVDEEIMSLLDASAVTFQCVLTKTDKINAADRDRVLDQVRAKLAPHPAAYPELILTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K +G+ LR I Sbjct: 200 EKSEGLATLRATIA 213 >gi|182680231|ref|YP_001834377.1| ribosome biogenesis GTP-binding protein YsxC [Beijerinckia indica subsp. indica ATCC 9039] gi|182636114|gb|ACB96888.1| GTP-binding protein HSR1-related [Beijerinckia indica subsp. indica ATCC 9039] Length = 244 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 95/205 (46%), Positives = 118/205 (57%), Gaps = 5/205 (2%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + F G LP G PEIAF+GRSNVGKSSL+N L RK LARTS+ PGRT Sbjct: 33 LFAQ-ECTFFWGAAARSQLPPEGAPEIAFAGRSNVGKSSLLNALTGRKTLARTSHTPGRT 91 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF M LVDMPGYGYA A K+ + +W L +L R L VY Sbjct: 92 QELNFFAL----GPTIESARMRLVDMPGYGYAAASKEKIAAWTSLCRDFLRGRVPLLRVY 147 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K ID + LD+ A+SYQIVLTK D++ + + K + P A+ Sbjct: 148 VLIDGRHGLKPIDSETLDLLDQSAISYQIVLTKRDEVKKSEQAARIASVKAALAKRPAAY 207 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 P+VI TSS +GI LR AI + Sbjct: 208 PDVIFTSSQSGEGIADLRAAIARLL 232 >gi|34540179|ref|NP_904658.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas gingivalis W83] gi|188995479|ref|YP_001929731.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas gingivalis ATCC 33277] gi|81572162|sp|Q7MX68|ENGB_PORGI RecName: Full=Probable GTP-binding protein EngB gi|238689267|sp|B2RL89|ENGB_PORG3 RecName: Full=Probable GTP-binding protein EngB gi|34396491|gb|AAQ65557.1| GTP-binding protein [Porphyromonas gingivalis W83] gi|188595159|dbj|BAG34134.1| putative GTP-binding protein [Porphyromonas gingivalis ATCC 33277] Length = 201 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P PE AF GRSNVGKSSLIN+L +K LA TS PG+TQ +N F+ Sbjct: 8 FVISNTDVRKCPDTRLPEYAFIGRSNVGKSSLINMLTGQKGLAMTSQKPGKTQLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYAR N +S +I Y+ R L +++LIDCRH Sbjct: 68 DD---------SWYLVDLPGYGYARLGASNRESLRRIIETYILCREQLSSLFVLIDCRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L + + + IV TK DKLS + +E E K + P V TSS Sbjct: 119 PQKIDLEFLQWLGENGIPFSIVFTKADKLSFSRLKENTEAYKQKLLETWEELPPVFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 K+ G E L I ++IN Sbjct: 179 EKKTGKEELLDYI-DSIN 195 >gi|218261711|ref|ZP_03476446.1| hypothetical protein PRABACTJOHN_02114 [Parabacteroides johnsonii DSM 18315] gi|218223845|gb|EEC96495.1| hypothetical protein PRABACTJOHN_02114 [Parabacteroides johnsonii DSM 18315] Length = 198 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + P PE AF GRSNVGKSSLIN+L +K LA TS PG+T +N Sbjct: 4 KSAEFVISNTNVKKCPAGNLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTMLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYG+A+ K+ ++ +I Y+ ER L +++LID Sbjct: 64 HFLIN---------GQWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 CRH ++ID + +L + + + ++ TKIDK+S QE L+ + + P ++ Sbjct: 115 CRHEPQKIDLEFMEWLGENGIPFSLIFTKIDKISKGRLQENLKAYQTKLLESWEELPPIL 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 +SS K++G + + I E Sbjct: 175 LSSSEKKEGRDEILDYIDE 193 >gi|238921710|ref|YP_002935225.1| ribosome biogenesis GTP-binding protein YsxC [Edwardsiella ictaluri 93-146] gi|259645894|sp|C5BC84|ENGB_EDWI9 RecName: Full=Probable GTP-binding protein EngB gi|238871279|gb|ACR70990.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 217 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 112/205 (54%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 ++ + F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS Sbjct: 1 MARQTYNYHVTHFVTSAPDIRHLPEDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F +D + LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEVED---------GIRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRQCL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + + +L+D RH +K +DQ + ++ + + ++LTK DKL+ + L + + + Sbjct: 112 KGLVVLMDIRHPLKDLDQQMIAWAVEVGLPVLLLLTKADKLASGARKAQLNMVREAVLPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V SS+K+ G++ LR + Sbjct: 172 -MGDIQVDAFSSLKKFGVDKLRDKL 195 >gi|15834041|ref|NP_312814.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. Sakai] gi|161367480|ref|NP_290489.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 EDL933] gi|168755530|ref|ZP_02780537.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4401] gi|168768147|ref|ZP_02793154.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4486] gi|168780765|ref|ZP_02805772.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4076] gi|168786702|ref|ZP_02811709.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC869] gi|168799576|ref|ZP_02824583.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC508] gi|195937501|ref|ZP_03082883.1| GTPase EngB [Escherichia coli O157:H7 str. EC4024] gi|208807401|ref|ZP_03249738.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4206] gi|208814207|ref|ZP_03255536.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4045] gi|208819675|ref|ZP_03259995.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4042] gi|209398819|ref|YP_002273380.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4115] gi|217326295|ref|ZP_03442379.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. TW14588] gi|254795855|ref|YP_003080692.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. TW14359] gi|261223491|ref|ZP_05937772.1| GTP-binding protein [Escherichia coli O157:H7 str. FRIK2000] gi|261257254|ref|ZP_05949787.1| GTP-binding protein [Escherichia coli O157:H7 str. FRIK966] gi|291285275|ref|YP_003502093.1| putative GTP-binding protein engB [Escherichia coli O55:H7 str. CB9615] gi|21362528|sp|Q8X8H0|ENGB_ECO57 RecName: Full=Probable GTP-binding protein EngB gi|238058983|sp|B5YZ00|ENGB_ECO5E RecName: Full=Probable GTP-binding protein EngB gi|13364263|dbj|BAB38210.1| essential GTPase for cell cycle [Escherichia coli O157:H7 str. Sakai] gi|189001573|gb|EDU70559.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4076] gi|189357180|gb|EDU75599.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4401] gi|189362605|gb|EDU81024.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC4486] gi|189373339|gb|EDU91755.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC869] gi|189378061|gb|EDU96477.1| putative GTP-binding protein EngB [Escherichia coli O157:H7 str. EC508] gi|208727202|gb|EDZ76803.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4206] gi|208735484|gb|EDZ84171.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4045] gi|208739798|gb|EDZ87480.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4042] gi|209160219|gb|ACI37652.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. EC4115] gi|209752828|gb|ACI74721.1| hypothetical protein ECs4787 [Escherichia coli] gi|209752830|gb|ACI74722.1| hypothetical protein ECs4787 [Escherichia coli] gi|209752832|gb|ACI74723.1| hypothetical protein ECs4787 [Escherichia coli] gi|209752834|gb|ACI74724.1| hypothetical protein ECs4787 [Escherichia coli] gi|209752836|gb|ACI74725.1| hypothetical protein ECs4787 [Escherichia coli] gi|217322516|gb|EEC30940.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O157:H7 str. TW14588] gi|254595255|gb|ACT74616.1| GTP-binding protein [Escherichia coli O157:H7 str. TW14359] gi|290765148|gb|ADD59109.1| Probable GTP-binding protein engB [Escherichia coli O55:H7 str. CB9615] gi|320191045|gb|EFW65695.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. EC1212] gi|320639202|gb|EFX08829.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. G5101] gi|320644590|gb|EFX13644.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. 493-89] gi|320649914|gb|EFX18422.1| GTP-binding protein YsxC [Escherichia coli O157:H- str. H 2687] gi|320655221|gb|EFX23167.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320666007|gb|EFX33026.1| GTP-binding protein YsxC [Escherichia coli O157:H7 str. LSU-61] gi|326338133|gb|EGD61963.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1044] gi|326342573|gb|EGD66346.1| GTP-binding protein EngB [Escherichia coli O157:H7 str. 1125] Length = 210 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 109/198 (55%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 +K++G++ LR+ + N Sbjct: 181 LKKQGVDKLRQKLDTWFN 198 >gi|311281672|ref|YP_003943903.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter cloacae SCF1] gi|308750867|gb|ADO50619.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter cloacae SCF1] Length = 208 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSGIQVLVLLTKADKLASGARKAQLNMVREAATAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLREKL 193 >gi|304570792|ref|YP_002516178.2| ribosome biogenesis GTP-binding protein YsxC [Caulobacter crescentus NA1000] Length = 229 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 89/205 (43%), Positives = 121/205 (59%), Gaps = 9/205 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F F+ G + +P + PE+AF+GRSNVGKSSLIN LVN+K LAR SN PGRT Sbjct: 31 VFFAQPVSFIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRT 90 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + +NFF+ + + LVD+PGYG+AR + D + L YL R+ L+ VY Sbjct: 91 REINFFLLAE---------KVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVY 141 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K++D + LD AVSYQIVLTK DK+ P + + +T+ I A Sbjct: 142 VLIDARHGLKKVDLEALDALDVAAVSYQIVLTKADKIKPAEVDKVVAETQKAIAKRAAAF 201 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 P V+ TSS K G+ LR I+ Sbjct: 202 PRVLATSSEKGLGMPELRAEIVRLC 226 >gi|197286653|ref|YP_002152525.1| GTP-binding protein [Proteus mirabilis HI4320] gi|194684140|emb|CAR45568.1| probable GTP-binding protein [Proteus mirabilis HI4320] Length = 207 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 10/205 (4%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 T F F+ P+I LP EIAF+GRSN GKSS +N L + LARTS PGR Sbjct: 2 TQFNYQKAHFIISAPDIRHLPPDTGIEIAFAGRSNAGKSSALNALTQQNGLARTSKTPGR 61 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F ++ LVD+PGYGYA+ P++ W + YL +R L+ V Sbjct: 62 TQLINLFQIEEGR---------RLVDLPGYGYAQVPEEMKRKWQRSLGEYLQKRECLKGV 112 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +L+D RH +K +D + + + ++LTK DKL+ ++ L + + + Sbjct: 113 VILMDIRHPLKDLDMQMIDWAVDSELPTLVLLTKADKLASGARKKQLMAVQNALSE-KSG 171 Query: 185 HPEVIPTSSVKRKGIEVLRKAILET 209 V SS+K+ GI+ LR + E Sbjct: 172 DIRVECFSSLKKIGIDKLRNTLNEW 196 >gi|92119159|ref|YP_578888.1| ribosome biogenesis GTP-binding protein YsxC [Nitrobacter hamburgensis X14] gi|119369222|sp|Q1QH69|ENGB_NITHX RecName: Full=Probable GTP-binding protein EngB gi|91802053|gb|ABE64428.1| GTP-binding protein [Nitrobacter hamburgensis X14] Length = 217 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 97/202 (48%), Positives = 123/202 (60%), Gaps = 7/202 (3%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTS PGRTQ L Sbjct: 19 GDWQFIWASPSIETLPPMAGVEVAFAGRSNVGKSSLINALTGRGTLARTSRTPGRTQELI 78 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF +++ LVDMPGYG+A APK + SW LI ++L R++L VY+LID Sbjct: 79 FFEGPKDADV-------RLVDMPGYGFASAPKARIASWTSLIHKFLLGRASLARVYVLID 131 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K IDQ + + LD+ AVSYQIVLTK D++ T E E T+ L+ +P A P+V+ Sbjct: 132 SRHGIKDIDQAILTTLDRSAVSYQIVLTKADEVKATEMAERTEATRTLLAKHPAAFPDVL 191 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS G+ LR A+ I Sbjct: 192 VTSSRTGYGVPELRAAMARLIG 213 >gi|332828393|gb|EGK01102.1| GTP-binding protein engB [Dysgonomonas gadei ATCC BAA-286] Length = 198 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 113/199 (56%), Gaps = 10/199 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ + P+ G PE AF GRSNVGKSSLIN+L NRK LA TS+ PG+TQ +N F+ Sbjct: 7 QFVVSNTDYRKCPQDGKPEYAFIGRSNVGKSSLINMLTNRKGLAMTSSKPGKTQLINHFI 66 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ K+ D +I Y+ R+ L C++LL+DCRH Sbjct: 67 IND---------EWYLVDLPGYGYAQRGKEGRDQIRKIIDSYIINRAELTCLFLLLDCRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +QID + ++L ++ V + IV TKIDKLS ++ +E ++ P + +S Sbjct: 118 EPQQIDIEFMNWLGEEGVPFVIVFTKIDKLSKGALKKNMEAYTDTLKETWEEIPPIFYSS 177 Query: 193 SVKRKGIEVLRKAILETIN 211 + R G + + I E IN Sbjct: 178 AEHRLGADEILGYI-EQIN 195 >gi|281180927|dbj|BAI57257.1| GTP-binding protein [Escherichia coli SE15] Length = 210 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 109/198 (55%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGACKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 +K++G++ LR+ + N Sbjct: 181 LKKQGVDKLRQKLDTWFN 198 >gi|261342937|ref|ZP_05970795.1| hypothetical protein ENTCAN_09535 [Enterobacter cancerogenus ATCC 35316] gi|288314685|gb|EFC53623.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacter cancerogenus ATCC 35316] Length = 209 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 112/198 (56%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ P++ W + YL +R L+ + +L+D RH Sbjct: 71 AEGK---------RLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ + ++ ++LTK DKL+ + + + + + +V P SS Sbjct: 122 LKDLDQQMIAWAVESDIAVLVLLTKADKLASGARKAQVNMVREAVLAF-NGDVQVEPFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 +K++G++ LR+ + N Sbjct: 181 LKKQGVDKLRQKLDSWFN 198 >gi|152972673|ref|YP_001337819.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238892278|ref|YP_002917012.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae NTUH-K2044] gi|262041647|ref|ZP_06014840.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|166225962|sp|A6TG68|ENGB_KLEP7 RecName: Full=Probable GTP-binding protein EngB gi|150957522|gb|ABR79552.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238544594|dbj|BAH60945.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041000|gb|EEW42078.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 210 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 109/198 (55%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ P++ W + YL +R L+ + +L+D RH Sbjct: 71 AEGK---------RLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + + + + + +V P SS Sbjct: 122 LKDLDQQMIEWAVESDIQVLVLLTKADKLASGARKAQVNMVREAVLAF-NGDVQVEPFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ G++ LR+ + N Sbjct: 181 LKKSGVDKLRQKLDSWFN 198 >gi|156936144|ref|YP_001440060.1| ribosome biogenesis GTP-binding protein YsxC [Cronobacter sakazakii ATCC BAA-894] gi|156534398|gb|ABU79224.1| hypothetical protein ESA_04042 [Cronobacter sakazakii ATCC BAA-894] Length = 222 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 22 FVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 81 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 82 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHP 132 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 133 LKDLDQQMIEWAVDSGIPVLVLLTKADKLASGARKAQLNMVREAVIAF-NGDVQVEAFSS 191 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ G++ LR + N Sbjct: 192 LKKTGVDKLRIKLDSWFN 209 >gi|268318043|ref|YP_003291762.1| small GTP-binding protein [Rhodothermus marinus DSM 4252] gi|262335577|gb|ACY49374.1| small GTP-binding protein [Rhodothermus marinus DSM 4252] Length = 198 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 79/200 (39%), Positives = 109/200 (54%), Gaps = 10/200 (5%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K A F R V LP G PE+AF+GRSNVGKSSL+N L+ LARTS+ PG+T+ L Sbjct: 3 KPAARFFRSVTRWEDLPDDGLPEVAFAGRSNVGKSSLLNALLRAPGLARTSSTPGKTRQL 62 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 NF+ + + VD+PGYGYAR ++ WG LI RYL ER TL V LI Sbjct: 63 NFYRVNE---------QLYFVDLPGYGYARTSQEERRLWGRLITRYLQERPTLALVVHLI 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D RH +D+ + + + V Y I LTK DK+S + + + + ++ P + Sbjct: 114 DSRHPPTPLDEAMMDLMRGQHVPYLIALTKADKVSGNRRAQAVREVERALQARAMEVP-I 172 Query: 189 IPTSSVKRKGIEVLRKAILE 208 IPTS+ G+ L + I + Sbjct: 173 IPTSAHTGLGLRDLWRWIEQ 192 >gi|258541763|ref|YP_003187196.1| ribosome biogenesis GTP-binding protein YsxC [Acetobacter pasteurianus IFO 3283-01] gi|256632841|dbj|BAH98816.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01] gi|256635898|dbj|BAI01867.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-03] gi|256638953|dbj|BAI04915.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-07] gi|256642007|dbj|BAI07962.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-22] gi|256645062|dbj|BAI11010.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-26] gi|256648117|dbj|BAI14058.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-32] gi|256651170|dbj|BAI17104.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654161|dbj|BAI20088.1| GTP-binding protein [Acetobacter pasteurianus IFO 3283-12] Length = 227 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 115/195 (58%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G ++G LP PEIAF+GRSNVGKSSL+N L RK LAR S+ PGRT+ LNFF Sbjct: 35 FVFGAQKLGQLPPQTLPEIAFAGRSNVGKSSLVNALTGRKTLARASSEPGRTKQLNFFNL 94 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVDMPGYGYA+A K + W ++ YL R +L+ V LL+D R Sbjct: 95 ADR---------LMLVDMPGYGYAKAAKSVKEDWQDMMFDYLRGRPSLQRVVLLLDARVE 145 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D +V LDK AVS+Q+VLTK D + P + + IR +P A P + TSS Sbjct: 146 MKAHDLEVMDLLDKAAVSFQVVLTKCDSVKPGPLARKQAEVEAEIRRHPAAFPYLSLTSS 205 Query: 194 VKRKGIEVLRKAILE 208 +GIE LR + E Sbjct: 206 QTGEGIEGLRAELAE 220 >gi|271502638|ref|YP_003335664.1| ribosome biogenesis GTP-binding protein YsxC [Dickeya dadantii Ech586] gi|270346193|gb|ACZ78958.1| ribosome biogenesis GTP-binding protein YsxC [Dickeya dadantii Ech586] Length = 214 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 10/203 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ P+I LP E+AF+GRSN GKSS +N L N+K+LAR S PGRTQ Sbjct: 5 YNYHVTHFVTSAPDIRHLPADSGIEVAFAGRSNAGKSSALNTLTNQKSLARISKTPGRTQ 64 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F + + LVD+PGYGYA P++ W + YL +R+ L+ + + Sbjct: 65 LINLFEVAE---------GIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRNCLKGLVV 115 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + + + ++LTK DKL+ + L + + Sbjct: 116 LMDIRHPLKDLDQQMLEWAVDAGLPVLVLLTKADKLAQGARKSQLNMVREAVLPL-MGDI 174 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 +V SS+K+ G++ LR+ + Sbjct: 175 QVETFSSLKKTGVDKLRQKLDNW 197 >gi|298290370|ref|YP_003692309.1| ribosome biogenesis GTP-binding protein YsxC [Starkeya novella DSM 506] gi|296926881|gb|ADH87690.1| ribosome biogenesis GTP-binding protein YsxC [Starkeya novella DSM 506] Length = 233 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 97/201 (48%), Positives = 118/201 (58%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W FL P I +P EIA +GRSNVGKSSL+N L RK LARTS PGRTQ L Sbjct: 34 GEWNFLSAAPTIPTMPPMRGIEIALAGRSNVGKSSLVNALTGRKALARTSVTPGRTQELI 93 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF P + LVDMPGYG+A+APK VD+W I YL R+ L V++LID Sbjct: 94 FFGLG---------PELTLVDMPGYGFAKAPKDKVDAWTATIHAYLRGRANLARVFVLID 144 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K ID +V LDK AVSY IVLTK D+L + +E T+ + P A P V Sbjct: 145 SRHGLKPIDTEVLDGLDKAAVSYAIVLTKADQLKKGELAQRVEATQAALLRRPAAFPIVF 204 Query: 190 PTSSVKRKGIEVLRKAILETI 210 PTSS + GI LR A++ + Sbjct: 205 PTSSREGWGIPELRAAVVRLM 225 >gi|163739490|ref|ZP_02146900.1| GTP-binding protein [Phaeobacter gallaeciensis BS107] gi|161387243|gb|EDQ11602.1| GTP-binding protein [Phaeobacter gallaeciensis BS107] Length = 216 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 88/194 (45%), Positives = 120/194 (61%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L K LAR SN PGRTQ +N+F Sbjct: 29 FVKGVVAMSGLPPADRIEVCFAGRSNVGKSSLINALTGTKGLARASNTPGRTQEINYFTQ 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R TLR ++LID RHG Sbjct: 89 G---------PELYLVDLPGYGYANAPLPIVEKWQRLLKQYLSGRQTLRRSFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D ++ + LD AV++Q V+TK DK+ +E+ + + +P A+PE++ TSS Sbjct: 140 IKKVDDEIMTRLDSSAVTFQCVMTKADKVKDKDRAVVMEQVRSALSKHPAAYPEIVMTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 200 EKGDGIATLRSIIA 213 >gi|158425674|ref|YP_001526966.1| ribosome biogenesis GTP-binding protein YsxC [Azorhizobium caulinodans ORS 571] gi|158332563|dbj|BAF90048.1| GTP-binding protein [Azorhizobium caulinodans ORS 571] Length = 223 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 99/206 (48%), Positives = 120/206 (58%), Gaps = 9/206 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + W F+ P + +LP EIA GRSNVGKSSL+N L R LARTS PGRT Sbjct: 24 LLFAGEWKFVTAAPTVDVLPPMQGVEIALVGRSNVGKSSLVNALTGRTALARTSVTPGRT 83 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q L FF +P M LVDMPGYG+A+APK VD+W I YL R L V+ Sbjct: 84 QELIFF---------RCVPEMMLVDMPGYGFAKAPKDKVDAWVATIRAYLRGRVNLARVF 134 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K +D ++ LDK AVSY IVLTK D++ T + + TK IR P A Sbjct: 135 VLIDARHGIKPVDAEILDLLDKAAVSYAIVLTKSDQVKRTDLEAVIADTKDKIRRRPAAF 194 Query: 186 PEVIPTSSVKRKGIEVLRKAILETIN 211 PEV PTSS KG+ LR AI I+ Sbjct: 195 PEVFPTSSHGGKGLAELRAAIARIID 220 >gi|167644607|ref|YP_001682270.1| ribosome biogenesis GTP-binding protein YsxC [Caulobacter sp. K31] gi|167347037|gb|ABZ69772.1| GTP-binding protein HSR1-related [Caulobacter sp. K31] Length = 214 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 92/206 (44%), Positives = 123/206 (59%), Gaps = 10/206 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F + +F+ G ++ +P A PE+AF+GRSNVGKSSLIN LV + +LAR SN+ Sbjct: 14 AARVLFAQ-PCLFMMGAVKMDGMPTADFPEVAFAGRSNVGKSSLINGLVGQNHLARASNS 72 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+ +NFFV + + LVD+PGYG+AR K D + L YL R L Sbjct: 73 PGRTREVNFFVLAE---------KLRLVDLPGYGFARVSKTVADKFQDLGRAYLRGRVNL 123 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + VYLLID RHG+K +D + LD AVSYQIVLTK DK+ P + + T+ I Sbjct: 124 KRVYLLIDARHGLKSVDTEALDALDVAAVSYQIVLTKADKIKPAEVEAVVAATQKAIAKR 183 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAIL 207 P A P+V+ TSS K G+ LR I Sbjct: 184 PAAFPKVLATSSEKGDGLPELRAEIA 209 >gi|148258512|ref|YP_001243097.1| ribosome biogenesis GTP-binding protein YsxC [Bradyrhizobium sp. BTAi1] gi|146410685|gb|ABQ39191.1| putative GTP-binding protein engB [Bradyrhizobium sp. BTAi1] Length = 220 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 98/206 (47%), Positives = 130/206 (63%), Gaps = 9/206 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F + AW F P I LP +G EIAF+GRSNVGKSSLIN L + LARTS+ PGR Sbjct: 18 LFAQ-AWRFTHASPSIASLPPMSGQIEIAFAGRSNVGKSSLINALTGQNALARTSHTPGR 76 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ L FF D++ L LVDMPGYGYA A K V SW LI ++L R++L V Sbjct: 77 TQELIFFEGPDYAPL-------RLVDMPGYGYAAAAKTKVASWTKLIHQFLLGRASLARV 129 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 Y+LID RHG+K++DQ++F LD+ AVSYQ+VLTK D++ P + +T+ + +P A Sbjct: 130 YVLIDARHGLKEVDQEIFKTLDRSAVSYQLVLTKADQVKPPELAARIAETEAALAKHPAA 189 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 P+V+ TSS G+ LR A+ + Sbjct: 190 FPQVLATSSRSGTGMPELRAAMARLL 215 >gi|149371567|ref|ZP_01890983.1| GTP-binding protein [unidentified eubacterium SCB49] gi|149355194|gb|EDM43754.1| GTP-binding protein [unidentified eubacterium SCB49] Length = 199 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 106/200 (53%), Gaps = 9/200 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 A F+ E+ PK PE AF GRSNVGKSSLIN+LV++KN+A+TS PG+TQ +N Sbjct: 4 KAAEFIMSNSEVAKCPKDRLPEYAFIGRSNVGKSSLINMLVDQKNMAKTSGRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYGYAR KK ++ I Y +R L ++L+D Sbjct: 64 HFLIN---------KNWFLVDLPGYGYARVSKKAKKTFQRFITDYFEKREQLILAFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 CRH + IDQ+ +L + + + I+ TK DKL P + L+ + + P Sbjct: 115 CRHEPQPIDQEFMQYLGENGIPFHIIFTKADKLKPGALERNLKAYETKMLETWEEMPRSF 174 Query: 190 PTSSVKRKGIEVLRKAILET 209 TS+ K +G + L I E Sbjct: 175 VTSASKYEGRDELLNYIGEL 194 >gi|75677252|ref|YP_319673.1| GTPase EngB [Nitrobacter winogradskyi Nb-255] gi|119369225|sp|Q3SN20|ENGB_NITWN RecName: Full=Probable GTP-binding protein EngB gi|74422122|gb|ABA06321.1| GTPase [Nitrobacter winogradskyi Nb-255] Length = 217 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 96/202 (47%), Positives = 122/202 (60%), Gaps = 7/202 (3%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTS PGRTQ L Sbjct: 19 GEWQFIWASPSIETLPPMSGLEVAFAGRSNVGKSSLINALTGRSALARTSRTPGRTQELI 78 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ LVDMPGYG+A APK + SW LI ++L R+TL VY+LID Sbjct: 79 FFEGPKGVDV-------RLVDMPGYGFASAPKARIASWTSLIHQFLLGRATLARVYVLID 131 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K ID+ V LD+ AVSYQ+VLTK D++ T E ++ T+ + ++P A P+V+ Sbjct: 132 ARHGIKDIDKTVLGALDRSAVSYQVVLTKADEVKVTEMAERIDITRTQLASHPAAFPDVL 191 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS GI LR A+ I Sbjct: 192 VTSSRTGNGIPELRAAMARLIG 213 >gi|223041729|ref|ZP_03611923.1| putative GTP-binding protein EngB [Actinobacillus minor 202] gi|240950262|ref|ZP_04754541.1| GTPase EngB [Actinobacillus minor NM305] gi|223017467|gb|EEF15884.1| putative GTP-binding protein EngB [Actinobacillus minor 202] gi|240295239|gb|EER46040.1| GTPase EngB [Actinobacillus minor NM305] Length = 208 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 107/209 (51%), Gaps = 10/209 (4%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MTEQIKLNYHKTKFLTSAPDIRHLPEDSGIEIAFAGRSNAGKSTSLNALTNQKNLARTSK 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R Sbjct: 61 TPGRTQLINLFEV---------EPQCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKREC 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V +L+D RH +K +DQ + + + ++LTK DKLS + +T++ + I Sbjct: 112 LRGVVILMDIRHPLKDLDQQMIEWAVSAELPVLLLLTKADKLSQSARSKTVKMVREAILP 171 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +V S++ + GI+ L + Sbjct: 172 FQ-GDVQVEAYSALNKIGIDKLSAKLDSW 199 >gi|85705861|ref|ZP_01036957.1| GTP-binding protein [Roseovarius sp. 217] gi|85669449|gb|EAQ24314.1| GTP-binding protein [Roseovarius sp. 217] Length = 216 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 89/194 (45%), Positives = 120/194 (61%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++GV + LP A E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +NFF Sbjct: 29 FVKGVVAMSGLPPADRLEVCFAGRSNVGKSSLINALTGRKALARASNTPGRTQEINFFAL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA AP V W L+ +YLS R TLR ++L+D RHG Sbjct: 89 GESH---------YLVDLPGYGYANAPLAVVQKWQALLKQYLSGRQTLRRAFVLVDARHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+++ + LD AV++Q VLTK DK++ L++ + + +P A PE+I TSS Sbjct: 140 IKTVDEEIMTLLDGAAVTFQCVLTKTDKINAADRDRVLDQVRSKLAPHPAAFPELILTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K +G+ LR I Sbjct: 200 EKSEGLATLRATIA 213 >gi|331649708|ref|ZP_08350788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli M605] gi|331041341|gb|EGI13491.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli M605] Length = 215 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 16 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 76 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 127 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 186 LKKQGVDKLRQKL 198 >gi|329114453|ref|ZP_08243215.1| Putative GTP-binding protein EngB [Acetobacter pomorum DM001] gi|326696529|gb|EGE48208.1| Putative GTP-binding protein EngB [Acetobacter pomorum DM001] Length = 227 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 114/195 (58%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G +G LP PEIAF+GRSNVGKSSL+N L RK LAR S+ PGRT+ LNFF Sbjct: 35 FVFGAQRLGQLPPQTLPEIAFAGRSNVGKSSLVNALTGRKTLARASSEPGRTKQLNFFNL 94 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVDMPGYGYA+A K + W ++ YL R +L+ V LL+D R Sbjct: 95 ADR---------LMLVDMPGYGYAKAAKSVKEDWQDMMFDYLRGRPSLQRVVLLLDARVE 145 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D +V LDK AVS+Q+VLTK D + P + + IR +P A P + TSS Sbjct: 146 MKAHDLEVMDLLDKAAVSFQVVLTKCDSVKPGPLARKQAEVEAEIRRHPAAFPYLSLTSS 205 Query: 194 VKRKGIEVLRKAILE 208 +GIE LR + E Sbjct: 206 QTGEGIEGLRAELAE 220 >gi|85717143|ref|ZP_01048102.1| GTP-binding protein [Nitrobacter sp. Nb-311A] gi|85696034|gb|EAQ33933.1| GTP-binding protein [Nitrobacter sp. Nb-311A] Length = 249 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 92/202 (45%), Positives = 121/202 (59%), Gaps = 7/202 (3%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTS PGRTQ L Sbjct: 51 GDWQFIWASPSIETLPPMAGLEVAFAGRSNVGKSSLINALTGRNALARTSRTPGRTQELI 110 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + LVDMPGYG+A APK + SW LI R+L R+TL VY+LID Sbjct: 111 FFEGP-------KGTDVRLVDMPGYGFASAPKDRIASWTSLIHRFLLGRATLARVYVLID 163 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K D++V + LD+ AVSYQ+VLTK D++ ++ ++ T+ + ++ A P+V+ Sbjct: 164 SRHGIKDTDRNVLTTLDRAAVSYQVVLTKADEVKAAELEKRIDATRTQLLSHSAAFPDVL 223 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS G+ LR A+ I Sbjct: 224 ATSSRTGYGMPELRAAMARLIG 245 >gi|3820578|gb|AAC69623.1| GTP-binding protein [Caulobacter vibrioides] Length = 199 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 89/205 (43%), Positives = 121/205 (59%), Gaps = 9/205 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F F+ G + +P + PE+AF+GRSNVGKSSLIN LVN+K LAR SN PGRT Sbjct: 1 MFFAQPVSFIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRT 60 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + +NFF+ + + LVD+PGYG+AR + D + L YL R+ L+ VY Sbjct: 61 RQINFFLLAE---------KVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVY 111 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K++D + LD AVSYQIVLTK DK+ P + + +T+ I A Sbjct: 112 VLIDARHGLKKVDLEALDALDVAAVSYQIVLTKADKIKPAEVDKVVAETQKAIAKRAAAF 171 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 P V+ TSS K G+ LR I+ Sbjct: 172 PRVLATSSEKGLGMPELRAEIVRLC 196 >gi|46201109|ref|ZP_00055731.2| COG0218: Predicted GTPase [Magnetospirillum magnetotacticum MS-1] Length = 228 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 95/202 (47%), Positives = 120/202 (59%), Gaps = 10/202 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + F++G + LP A E+AF+GRSNVGKSSLIN L R LARTSN PGRT Sbjct: 34 LFAR-ECTFMQGASGLDHLPAATLTEVAFAGRSNVGKSSLINALTGRNTLARTSNTPGRT 92 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF N + LVDMPGYG+A+APK V+ W L+ +L RS LR Sbjct: 93 QELNFF---------NLGGRLVLVDMPGYGFAQAPKGLVEKWTRLVNGFLKGRSVLRRAV 143 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +L+D RHG+K D+D+ LDK AV YQ+VLTK DKL + +T I++ AH Sbjct: 144 VLVDSRHGLKDSDRDMMKMLDKAAVVYQVVLTKADKLKASELDAVQARTLEEIKSRVAAH 203 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P +I TSS K GI LR + Sbjct: 204 PSLIVTSSEKGTGIPELRAELA 225 >gi|16125019|ref|NP_419583.1| GTPase EngB [Caulobacter crescentus CB15] gi|13638031|sp|Q9ZG89|ENGB_CAUCR RecName: Full=GTP-binding protein EngB; AltName: Full=GTP-binding protein CgpA gi|254783191|sp|B8H1E7|ENGB_CAUCN RecName: Full=Probable GTP-binding protein EngB gi|13422003|gb|AAK22751.1| GTP-binding protein CgpA [Caulobacter crescentus CB15] gi|220962914|gb|ACL94270.1| GTP-binding protein YihA [Caulobacter crescentus NA1000] Length = 199 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 89/205 (43%), Positives = 121/205 (59%), Gaps = 9/205 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F F+ G + +P + PE+AF+GRSNVGKSSLIN LVN+K LAR SN PGRT Sbjct: 1 MFFAQPVSFIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRT 60 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + +NFF+ + + LVD+PGYG+AR + D + L YL R+ L+ VY Sbjct: 61 REINFFLLAE---------KVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVY 111 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K++D + LD AVSYQIVLTK DK+ P + + +T+ I A Sbjct: 112 VLIDARHGLKKVDLEALDALDVAAVSYQIVLTKADKIKPAEVDKVVAETQKAIAKRAAAF 171 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 P V+ TSS K G+ LR I+ Sbjct: 172 PRVLATSSEKGLGMPELRAEIVRLC 196 >gi|330908183|gb|EGH36702.1| GTP-binding protein EngB [Escherichia coli AA86] Length = 210 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|293470176|ref|ZP_06664587.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B088] gi|291321386|gb|EFE60825.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B088] Length = 216 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 17 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 76 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 77 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 128 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 186 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 187 LKKQGVDKLRQKL 199 >gi|308070420|ref|YP_003872025.1| GTP-binding protein engB [Paenibacillus polymyxa E681] gi|305859699|gb|ADM71487.1| Probable GTP-binding protein engB [Paenibacillus polymyxa E681] Length = 203 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 102/200 (51%), Gaps = 11/200 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ P PEIA +GRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LN+ Sbjct: 5 KAEFIISAVGPDQFPVDALPEIALAGRSNVGKSSLINRLINRKNLARTSSTPGKTQQLNY 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + D + VD PGYGYA+ K + +WG +I YL ER L+ V ++D Sbjct: 65 YRIND---------DLYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDL 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D ++ +L + +V TK DK+ T ++ + K + P IP Sbjct: 116 RHPPSKDDIMMYDWLRHNGLPVCVVGTKADKIPKTRREKHYKVIKQELGILPGGL--FIP 173 Query: 191 TSSVKRKGIEVLRKAILETI 210 SS + G E L I I Sbjct: 174 FSSEEGMGKEELWSVISSYI 193 >gi|126728215|ref|ZP_01744031.1| GTP-binding protein [Sagittula stellata E-37] gi|126711180|gb|EBA10230.1| GTP-binding protein [Sagittula stellata E-37] Length = 216 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 118/194 (60%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+GV + LP E+ F+GRSNVGKSSLIN L RK LAR SN PGRTQ +N+F Sbjct: 29 FLKGVVAMDGLPPDDRAEVCFAGRSNVGKSSLINALTGRKGLARASNTPGRTQEINYFTL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYG+A AP V W L+ YL+ R +LR ++LID RHG Sbjct: 89 GSER---------YLVDLPGYGFANAPVAVVAKWQALLKAYLAGRVSLRRAFVLIDHRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK +D ++ + LD+ AV++Q+V+TK DK+ + LE+ + + +P A+PE++ TSS Sbjct: 140 VKAVDNEIMTLLDRSAVTFQVVMTKADKVKGAEHDKILEQVRGQLAKHPAAYPEIVVTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 200 EKGDGIGTLRSIIA 213 >gi|56421184|ref|YP_148502.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus kaustophilus HTA426] gi|81819655|sp|Q5KWK2|ENGB_GEOKA RecName: Full=Probable GTP-binding protein EngB gi|56381026|dbj|BAD76934.1| GTP-binding protein [Geobacillus kaustophilus HTA426] Length = 195 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + + P G PE+A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LN Sbjct: 4 KKAELVTSAVKPEQYPDGGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F++ D + VD+PGYG+AR K+ WG ++ Y + R L+ LL+D Sbjct: 64 FYLIND---------SFYFVDVPGYGFARVSKQERQKWGNMMETYFTTREALKAAVLLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D ++ FL + ++ TK DK+ Q+ + + +R +I Sbjct: 115 LRHPPTKDDVMMYEFLKHYEIPVIVIATKADKVPRGKHQKHAKIARETLRM--ADGDPLI 172 Query: 190 PTSSVKRKGIEVLRKAIL 207 S+ +G + A+L Sbjct: 173 LFSAETGQGKDEAWAALL 190 >gi|167464640|ref|ZP_02329729.1| GTPase EngB [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383228|ref|ZP_08057039.1| YsxC-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152497|gb|EFX45283.1| YsxC-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 204 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 104/203 (51%), Gaps = 11/203 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ P PEIA +GRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LN Sbjct: 4 NEAQFVISAVGPSQYPTDALPEIALAGRSNVGKSSLINRLINRKNLARTSSQPGKTQTLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +++ + VD+PGYGYA+ K WG I YL +R L+ V LID Sbjct: 64 YYLINQ---------DLYFVDLPGYGYAKVSKAKRAEWGKFIENYLLKREPLKLVLQLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + DQ ++++L + +V TK DK+ Q+ + K + + H +I Sbjct: 115 LRHPPTKDDQAMYAWLKHHKLPVCVVTTKADKIPKGKWQKHCKVIKETLEFEKSDH--MI 172 Query: 190 PTSSVKRKGIEVLRKAILETINY 212 SS +G E L I I + Sbjct: 173 VFSSETGQGKEELWSFIENKIGW 195 >gi|117626138|ref|YP_859461.1| GTPase EngB [Escherichia coli APEC O1] gi|227885401|ref|ZP_04003206.1| GTP-binding protein [Escherichia coli 83972] gi|300976574|ref|ZP_07173524.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 45-1] gi|300985860|ref|ZP_07177624.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 200-1] gi|301046668|ref|ZP_07193797.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 185-1] gi|259645893|sp|A1AI47|ENGB_ECOK1 RecName: Full=Probable GTP-binding protein EngB gi|115515262|gb|ABJ03337.1| putative GTP-binding protein [Escherichia coli APEC O1] gi|227837659|gb|EEJ48125.1| GTP-binding protein [Escherichia coli 83972] gi|300301380|gb|EFJ57765.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 185-1] gi|300306499|gb|EFJ61019.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 200-1] gi|300410032|gb|EFJ93570.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 45-1] gi|307556007|gb|ADN48782.1| probable GTP-binding protein [Escherichia coli ABU 83972] gi|315289565|gb|EFU48958.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 110-3] gi|315292789|gb|EFU52141.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 153-1] gi|315300260|gb|EFU59496.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 16-3] gi|324006859|gb|EGB76078.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 57-2] gi|324012583|gb|EGB81802.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 60-1] Length = 215 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 16 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 76 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 127 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 186 LKKQGVDKLRQKL 198 >gi|332084079|gb|EGI89284.1| putative GTP-binding protein [Shigella boydii 5216-82] Length = 210 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 ADGK---------CLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|289168391|ref|YP_003446660.1| hypothetical protein smi_1558 [Streptococcus mitis B6] gi|288907958|emb|CBJ22798.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 197 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 13 LLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 72 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 73 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDP 123 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 124 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 181 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 182 SKAGMDEAWDAILEKL 197 >gi|169832607|ref|YP_001694973.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae Hungary19A-6] gi|238688373|sp|B1ICY8|ENGB_STRPI RecName: Full=Probable GTP-binding protein EngB gi|168995109|gb|ACA35721.1| GTP-binding protein [Streptococcus pneumoniae Hungary19A-6] Length = 195 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 103/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 ++G++ AILE + Sbjct: 180 SKEGMDEAWDAILEKL 195 >gi|170769691|ref|ZP_02904144.1| putative GTP-binding protein EngB [Escherichia albertii TW07627] gi|170121499|gb|EDS90430.1| putative GTP-binding protein EngB [Escherichia albertii TW07627] Length = 210 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 108/195 (55%), Gaps = 10/195 (5%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 9 MHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLF 68 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D R Sbjct: 69 EVADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIR 119 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 H +K +DQ + + ++ ++LTK DKL+ + L + + + +V Sbjct: 120 HPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETF 178 Query: 192 SSVKRKGIEVLRKAI 206 SS+K++G++ LR+ + Sbjct: 179 SSLKKQGVDKLRQKL 193 >gi|92115232|ref|YP_575160.1| cell division checkpoint GTPase YihA [Chromohalobacter salexigens DSM 3043] gi|119369183|sp|Q1QSU7|ENGB_CHRSD RecName: Full=Probable GTP-binding protein EngB gi|91798322|gb|ABE60461.1| cell division checkpoint GTPase YihA [Chromohalobacter salexigens DSM 3043] Length = 207 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 107/197 (54%), Gaps = 8/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + P E+AF+GRSN GKSS IN L +K LARTS PGRTQ +NFF Sbjct: 14 FLTSAPGLAQCPPDQGAEVAFAGRSNAGKSSAINTLTQQKALARTSKTPGRTQLINFFTL 73 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N LVD+PGYG+A+ P + W + YL ER+TLR + L++D RH Sbjct: 74 -------ANDETYRLVDLPGYGFAKVPDQVKLEWQRHLSEYLYERATLRGLMLVMDVRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + DQ + + D+KA+ I+LTK DKL P A+ L + + + V S+ Sbjct: 127 LSEFDQMMLGWADEKAMPVHILLTKADKLKPGAAKSALLAVRRQLAD-WEDLVSVQLFSA 185 Query: 194 VKRKGIEVLRKAILETI 210 +KR+G++ R + + Sbjct: 186 LKRQGVDEARARMDAWL 202 >gi|206575834|ref|YP_002241256.1| putative GTP-binding protein EngB [Klebsiella pneumoniae 342] gi|288937895|ref|YP_003441954.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella variicola At-22] gi|290513118|ref|ZP_06552481.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. 1_1_55] gi|238058986|sp|B5XZJ3|ENGB_KLEP3 RecName: Full=Probable GTP-binding protein EngB gi|206564892|gb|ACI06668.1| putative GTP-binding protein EngB [Klebsiella pneumoniae 342] gi|288892604|gb|ADC60922.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella variicola At-22] gi|289774500|gb|EFD82505.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. 1_1_55] Length = 210 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 109/198 (55%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ P++ W + YL +R L+ + +L+D RH Sbjct: 71 AEGK---------RLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + + + + + +V P SS Sbjct: 122 LKDLDQQMIEWAVESDIQVLVLLTKADKLASGARKAQVNMVREAVLAF-NGDIQVEPFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ G++ LR+ + N Sbjct: 181 LKKSGVDKLRQKLDSWFN 198 >gi|254467073|ref|ZP_05080484.1| hypothetical protein RBY4I_3686 [Rhodobacterales bacterium Y4I] gi|206687981|gb|EDZ48463.1| hypothetical protein RBY4I_3686 [Rhodobacterales bacterium Y4I] Length = 215 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 88/194 (45%), Positives = 119/194 (61%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F +GV + LP A E+ F+GRSNVGKSS+IN + K +AR SN PGRTQ +NFF Sbjct: 29 FDKGVVAMNGLPDADRVEVCFAGRSNVGKSSVINAVTGTKGIARASNTPGRTQEINFFTQ 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P + LVD+PGYGYA AP V+ W L+ +YLS R LR ++LID RHG Sbjct: 89 G---------PDLYLVDLPGYGYANAPLAVVEKWQKLLKQYLSGRQNLRRAFVLIDSRHG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 VK++D+D+ LD AV++Q V+TK DK+ + LE+ + + +P A+PE++ TSS Sbjct: 140 VKKVDEDIMKLLDSAAVTFQCVMTKADKVKEKDRAKVLEQVRGALARHPAAYPEIVLTSS 199 Query: 194 VKRKGIEVLRKAIL 207 K GI LR I Sbjct: 200 EKGDGIPTLRSIIA 213 >gi|145698334|ref|NP_418301.3| GTP-binding protein required for normal cell division [Escherichia coli str. K-12 substr. MG1655] gi|157156230|ref|YP_001465345.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli E24377A] gi|157163335|ref|YP_001460653.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli HS] gi|161486045|ref|NP_756667.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli CFT073] gi|161950010|ref|YP_405310.2| ribosome biogenesis GTP-binding protein YsxC [Shigella dysenteriae Sd197] gi|161986408|ref|YP_312789.2| ribosome biogenesis GTP-binding protein YsxC [Shigella sonnei Ss046] gi|162138322|ref|YP_543397.2| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli UTI89] gi|170022121|ref|YP_001727075.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli ATCC 8739] gi|170683684|ref|YP_001746193.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli SMS-3-5] gi|187732245|ref|YP_001882562.1| ribosome biogenesis GTP-binding protein YsxC [Shigella boydii CDC 3083-94] gi|188492392|ref|ZP_02999662.1| GTPase family protein [Escherichia coli 53638] gi|191169445|ref|ZP_03031182.1| putative GTP-binding protein EngB [Escherichia coli B7A] gi|191173902|ref|ZP_03035422.1| putative GTP-binding protein EngB [Escherichia coli F11] gi|193063965|ref|ZP_03045051.1| putative GTP-binding protein EngB [Escherichia coli E22] gi|193068077|ref|ZP_03049042.1| putative GTP-binding protein EngB [Escherichia coli E110019] gi|215489198|ref|YP_002331629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O127:H6 str. E2348/69] gi|237702894|ref|ZP_04533375.1| GTPase EngB [Escherichia sp. 3_2_53FAA] gi|238902932|ref|YP_002928728.1| GTP-binding protein [Escherichia coli BW2952] gi|253775500|ref|YP_003038331.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|256021502|ref|ZP_05435367.1| ribosome biogenesis GTP-binding protein YsxC [Shigella sp. D9] gi|256026102|ref|ZP_05439967.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia sp. 4_1_40B] gi|260846367|ref|YP_003224145.1| GTP-binding protein [Escherichia coli O103:H2 str. 12009] gi|260857737|ref|YP_003231628.1| GTP-binding protein [Escherichia coli O26:H11 str. 11368] gi|260870581|ref|YP_003236983.1| GTP-binding protein [Escherichia coli O111:H- str. 11128] gi|293407484|ref|ZP_06651403.1| GTP-binding protein engB [Escherichia coli FVEC1412] gi|293413299|ref|ZP_06655960.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B354] gi|293417325|ref|ZP_06659949.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B185] gi|297517721|ref|ZP_06936107.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli OP50] gi|298383227|ref|ZP_06992820.1| GTP-binding protein engB [Escherichia coli FVEC1302] gi|301027904|ref|ZP_07191196.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 196-1] gi|306813870|ref|ZP_07448046.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli NC101] gi|307140559|ref|ZP_07499915.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H736] gi|307314015|ref|ZP_07593629.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli W] gi|309783772|ref|ZP_07678418.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|312969392|ref|ZP_07783594.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|331660414|ref|ZP_08361348.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA206] gi|332282740|ref|ZP_08395153.1| GTPase EngB [Shigella sp. D9] gi|67462332|sp|P0A6P7|ENGB_ECOLI RecName: Full=Probable GTP-binding protein EngB gi|67462333|sp|P0A6P8|ENGB_ECOL6 RecName: Full=Probable GTP-binding protein EngB gi|119369193|sp|Q1R448|ENGB_ECOUT RecName: Full=Probable GTP-binding protein EngB gi|119369257|sp|Q32A36|ENGB_SHIDS RecName: Full=Probable GTP-binding protein EngB gi|119369259|sp|Q3YVA8|ENGB_SHISS RecName: Full=Probable GTP-binding protein EngB gi|166920110|sp|A7ZU66|ENGB_ECO24 RecName: Full=Probable GTP-binding protein EngB gi|166920111|sp|A8A6W6|ENGB_ECOHS RecName: Full=Probable GTP-binding protein EngB gi|189037177|sp|B1IW48|ENGB_ECOLC RecName: Full=Probable GTP-binding protein EngB gi|226741188|sp|B1LMP7|ENGB_ECOSM RecName: Full=Probable GTP-binding protein EngB gi|238691700|sp|B2TVL1|ENGB_SHIB3 RecName: Full=Probable GTP-binding protein EngB gi|254783196|sp|B7UNI7|ENGB_ECO27 RecName: Full=Probable GTP-binding protein EngB gi|259645892|sp|C5A033|ENGB_ECOBW RecName: Full=Probable GTP-binding protein EngB gi|33358154|pdb|1PUI|A Chain A, Structure Of Engb Gtpase gi|33358155|pdb|1PUI|B Chain B, Structure Of Engb Gtpase gi|145693205|gb|AAC76862.3| GTP-binding protein required for normal cell division [Escherichia coli str. K-12 substr. MG1655] gi|157069015|gb|ABV08270.1| putative GTP-binding protein EngB [Escherichia coli HS] gi|157078260|gb|ABV17968.1| putative GTP-binding protein EngB [Escherichia coli E24377A] gi|169757049|gb|ACA79748.1| GTP-binding protein HSR1-related [Escherichia coli ATCC 8739] gi|170521402|gb|ACB19580.1| putative GTP-binding protein EngB [Escherichia coli SMS-3-5] gi|187429237|gb|ACD08511.1| putative GTP-binding protein EngB [Shigella boydii CDC 3083-94] gi|188487591|gb|EDU62694.1| GTPase family protein [Escherichia coli 53638] gi|190900513|gb|EDV60325.1| putative GTP-binding protein EngB [Escherichia coli B7A] gi|190905860|gb|EDV65479.1| putative GTP-binding protein EngB [Escherichia coli F11] gi|192929430|gb|EDV83038.1| putative GTP-binding protein EngB [Escherichia coli E22] gi|192958697|gb|EDV89135.1| putative GTP-binding protein EngB [Escherichia coli E110019] gi|215267270|emb|CAS11719.1| GTP-binding protein [Escherichia coli O127:H6 str. E2348/69] gi|222035577|emb|CAP78322.1| GTP-binding protein engB [Escherichia coli LF82] gi|226902831|gb|EEH89090.1| GTPase EngB [Escherichia sp. 3_2_53FAA] gi|238861392|gb|ACR63390.1| GTP-binding protein [Escherichia coli BW2952] gi|253326544|gb|ACT31146.1| GTP-binding protein HSR1-related [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|257756386|dbj|BAI27888.1| GTP-binding protein [Escherichia coli O26:H11 str. 11368] gi|257761514|dbj|BAI33011.1| GTP-binding protein [Escherichia coli O103:H2 str. 12009] gi|257766937|dbj|BAI38432.1| GTP-binding protein [Escherichia coli O111:H- str. 11128] gi|260451300|gb|ACX41722.1| GTP-binding protein HSR1-related protein [Escherichia coli DH1] gi|284923966|emb|CBG37065.1| probable GTP-binding protein [Escherichia coli 042] gi|291425401|gb|EFE98440.1| GTP-binding protein engB [Escherichia coli FVEC1412] gi|291430845|gb|EFF03841.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B185] gi|291468047|gb|EFF10545.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B354] gi|294490765|gb|ADE89521.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli IHE3034] gi|298276261|gb|EFI17781.1| GTP-binding protein engB [Escherichia coli FVEC1302] gi|299878997|gb|EFI87208.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 196-1] gi|305852868|gb|EFM53315.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli NC101] gi|306906332|gb|EFN36848.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli W] gi|307628941|gb|ADN73245.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli UM146] gi|308928355|gb|EFP73816.1| conserved hypothetical protein [Shigella dysenteriae 1617] gi|312285939|gb|EFR13857.1| conserved hypothetical protein [Escherichia coli 2362-75] gi|312948434|gb|ADR29261.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli O83:H1 str. NRG 857C] gi|315063150|gb|ADT77477.1| GTP-binding protein [Escherichia coli W] gi|315138433|dbj|BAJ45592.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli DH1] gi|320174863|gb|EFW49984.1| GTP-binding protein EngB [Shigella dysenteriae CDC 74-1112] gi|320182136|gb|EFW57039.1| GTP-binding protein EngB [Shigella boydii ATCC 9905] gi|320196912|gb|EFW71534.1| GTP-binding protein EngB [Escherichia coli WV_060327] gi|320198936|gb|EFW73534.1| GTP-binding protein EngB [Escherichia coli EC4100B] gi|323155159|gb|EFZ41346.1| hypothetical protein ECEPECA14_2976 [Escherichia coli EPECa14] gi|323189711|gb|EFZ74990.1| hypothetical protein ECRN5871_2081 [Escherichia coli RN587/1] gi|323380786|gb|ADX53054.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli KO11] gi|323934351|gb|EGB30764.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli E1520] gi|323939085|gb|EGB35301.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli E482] gi|323943760|gb|EGB39857.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H120] gi|323949359|gb|EGB45248.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H252] gi|323954360|gb|EGB50145.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H263] gi|323959368|gb|EGB55029.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H489] gi|323964212|gb|EGB59695.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli M863] gi|323969731|gb|EGB65014.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA007] gi|323974267|gb|EGB69396.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TW10509] gi|324115641|gb|EGC09579.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli E1167] gi|327250492|gb|EGE62200.1| hypothetical protein ECSTEC7V_4574 [Escherichia coli STEC_7v] gi|331052363|gb|EGI24400.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA206] gi|332085127|gb|EGI90305.1| hypothetical protein SD15574_4569 [Shigella dysenteriae 155-74] gi|332105092|gb|EGJ08438.1| GTPase EngB [Shigella sp. D9] gi|332345854|gb|AEE59188.1| conserved hypothetical protein [Escherichia coli UMNK88] gi|332998505|gb|EGK18103.1| hypothetical protein SFK272_4369 [Shigella flexneri K-272] gi|333014000|gb|EGK33361.1| hypothetical protein SFK227_4300 [Shigella flexneri K-227] Length = 210 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|307706171|ref|ZP_07642989.1| conserved hypothetical protein [Streptococcus mitis SK321] gi|307618431|gb|EFN97580.1| conserved hypothetical protein [Streptococcus mitis SK321] Length = 195 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 NKAGMDEAWDAILEKL 195 >gi|15603376|ref|NP_246450.1| GTPase EngB [Pasteurella multocida subsp. multocida str. Pm70] gi|13431508|sp|P57947|ENGB_PASMU RecName: Full=Probable GTP-binding protein EngB gi|12721898|gb|AAK03595.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 205 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 106/208 (50%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P+I LP+ EIAF+GRSN GKS+ +N L N+K+LARTS Sbjct: 1 MSDIKLNYHKTHFLTSAPDIRALPEDSGIEIAFAGRSNAGKSTALNALTNQKSLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPQCRLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRQCL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGVVILMDIRHPLKDLDQQMIEWAVASELPVLLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V S++ + GI+ L + Sbjct: 172 Q-GDVQVEAFSALNKTGIDRLAAKLDSW 198 >gi|325499167|gb|EGC97026.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia fergusonii ECD227] Length = 207 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 8 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 68 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 119 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 177 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 178 LKKQGVDKLRQKL 190 >gi|329296747|ref|ZP_08254083.1| GTP-binding protein YsxC [Plautia stali symbiont] Length = 213 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FMLSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 VEGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRQALKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + I+LTK DKL+ + L + + +V SS Sbjct: 122 LKDLDQQMVEWAGQSGIPVMILLTKADKLTSGARKAQLNMVREASLAF-MGDVQVEMFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 181 LKKLGVDKLRQKL 193 >gi|308188688|ref|YP_003932819.1| GTP-binding protein engB [Pantoea vagans C9-1] gi|308059198|gb|ADO11370.1| Probable GTP-binding protein engB [Pantoea vagans C9-1] Length = 211 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K+ LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 KEGK---------RLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+ + + + + ++LTK DKL+ + L + + +V SS Sbjct: 122 LKDLDRQMIQWSVESGIPVLLLLTKADKLASGARKAQLNVVREAALEF-VGDVQVELFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ G++ +R+ + N Sbjct: 181 LKKIGVDKVRQKLDSWFN 198 >gi|260599982|ref|YP_003212553.1| GTP-binding protein YsxC [Cronobacter turicensis z3032] gi|260219159|emb|CBA34514.1| Probable GTP-binding protein engB [Cronobacter turicensis z3032] Length = 220 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 20 FVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 79 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 80 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRLCLKGLVVLMDIRHP 130 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + +V SS Sbjct: 131 LKDLDQQMIEWAVDSDIPVLVLLTKADKLASGARKAQLNMVREAALAF-NGDVQVEAFSS 189 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ G++ LR + N Sbjct: 190 LKKSGVDKLRIKLDTWFN 207 >gi|307943176|ref|ZP_07658521.1| ribosome biogenesis GTP-binding protein YsxC [Roseibium sp. TrichSKD4] gi|307773972|gb|EFO33188.1| ribosome biogenesis GTP-binding protein YsxC [Roseibium sp. TrichSKD4] Length = 215 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 97/201 (48%), Positives = 123/201 (61%), Gaps = 9/201 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + W F V E+ LP++ EIAF+GRSNVGKSSLIN L RK LARTS+ PGRT Sbjct: 18 LFAR-PWTFQTSVTEMVNLPESADTEIAFAGRSNVGKSSLINALTGRKGLARTSSTPGRT 76 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF + +VDMPGYGYA+APK VD+W L+ YL R LR V+ Sbjct: 77 QMLNFF--------HAPDTPITIVDMPGYGYAQAPKGLVDAWTKLVFSYLRGRPNLRRVF 128 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K+ D + LDK AV YQ+VLTK DK+ + L T+ + A+ Sbjct: 129 LLIDSRHGLKKNDLETMDLLDKAAVVYQVVLTKSDKIKKPQLAKLLTDTQTALAKRIAAY 188 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 PE+I TSS K I++L+ I Sbjct: 189 PEIIATSSEKDLCIDLLKAEI 209 >gi|324111948|gb|EGC05928.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia fergusonii B253] Length = 210 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|182684523|ref|YP_001836270.1| GTP-binding protein [Streptococcus pneumoniae CGSP14] gi|322377850|ref|ZP_08052339.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. M334] gi|226741185|sp|B2IR86|ENGB_STRPS RecName: Full=Probable GTP-binding protein EngB gi|182629857|gb|ACB90805.1| GTP-binding protein [Streptococcus pneumoniae CGSP14] gi|321281273|gb|EFX58284.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. M334] Length = 197 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 13 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 72 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 73 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 123 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 124 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 181 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 182 SKAGMDEAWDAILEKL 197 >gi|322387324|ref|ZP_08060934.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus infantis ATCC 700779] gi|321141853|gb|EFX37348.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus infantis ATCC 700779] Length = 195 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 TADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 TKAGMDQAWDAILEKL 195 >gi|15903469|ref|NP_359019.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae R6] gi|15459080|gb|AAL00230.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 197 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 13 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 72 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 73 D---------KMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDP 123 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 124 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 181 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 182 SKAGMDEAWDAILEKL 197 >gi|254039076|ref|ZP_04873126.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|226838512|gb|EEH70541.1| conserved hypothetical protein [Escherichia sp. 1_1_43] Length = 210 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + ++ SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQIETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|295690948|ref|YP_003594641.1| ribosome biogenesis GTP-binding protein YsxC [Caulobacter segnis ATCC 21756] gi|295432851|gb|ADG12023.1| ribosome biogenesis GTP-binding protein YsxC [Caulobacter segnis ATCC 21756] Length = 220 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 90/202 (44%), Positives = 119/202 (58%), Gaps = 9/202 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F F+ G + +P PE+AF+GRSNVGKSSLIN LVN+K LAR SN PGRT Sbjct: 22 VFFAQPVSFIMGAVRMDAMPAPDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRT 81 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + +NFF+ + + LVD+PGYG+AR + D + L YL R+ L+ VY Sbjct: 82 REINFFLLAE---------QVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVY 132 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K++D + LD AVSYQIVLTK DK+ P + + T I P A Sbjct: 133 VLIDARHGLKKVDLEALDALDVAAVSYQIVLTKSDKIKPAEVDKVVADTLKAIAKRPAAF 192 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P V+ TSS K G+ LR I+ Sbjct: 193 PRVLATSSEKGLGLPELRAEIV 214 >gi|221232329|ref|YP_002511482.1| GTP-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225861401|ref|YP_002742910.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae Taiwan19F-14] gi|307704382|ref|ZP_07641297.1| conserved hypothetical protein [Streptococcus mitis SK597] gi|307708345|ref|ZP_07644812.1| GTP-binding protein [Streptococcus mitis NCTC 12261] gi|254783212|sp|B8ZLT0|ENGB_STRPJ RecName: Full=Probable GTP-binding protein EngB gi|254783216|sp|C1CSI8|ENGB_STRZT RecName: Full=Probable GTP-binding protein EngB gi|220674790|emb|CAR69363.1| putative GTP-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225726988|gb|ACO22839.1| GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14] gi|307615791|gb|EFN94997.1| GTP-binding protein [Streptococcus mitis NCTC 12261] gi|307622067|gb|EFO01089.1| conserved hypothetical protein [Streptococcus mitis SK597] Length = 195 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 SKAGMDEAWDAILEKL 195 >gi|15901411|ref|NP_346015.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae TIGR4] gi|111658474|ref|ZP_01409147.1| hypothetical protein SpneT_02000374 [Streptococcus pneumoniae TIGR4] gi|116515393|ref|YP_816858.1| GTPase EngB [Streptococcus pneumoniae D39] gi|148984920|ref|ZP_01818173.1| GTPase EngB [Streptococcus pneumoniae SP3-BS71] gi|148988622|ref|ZP_01820055.1| GTPase EngB [Streptococcus pneumoniae SP6-BS73] gi|148990171|ref|ZP_01821402.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73] gi|148993406|ref|ZP_01822923.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68] gi|148997364|ref|ZP_01824969.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70] gi|149003199|ref|ZP_01828095.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69] gi|149007516|ref|ZP_01831151.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|149007879|ref|ZP_01831466.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|149012699|ref|ZP_01833675.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75] gi|149022038|ref|ZP_01836000.1| GTPase EngB [Streptococcus pneumoniae SP23-BS72] gi|168483553|ref|ZP_02708505.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00] gi|168486831|ref|ZP_02711339.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00] gi|168488709|ref|ZP_02712908.1| GTP-binding protein [Streptococcus pneumoniae SP195] gi|168491538|ref|ZP_02715681.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04] gi|168493473|ref|ZP_02717616.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06] gi|168575234|ref|ZP_02721197.1| GTP-binding protein [Streptococcus pneumoniae MLV-016] gi|194397246|ref|YP_002038200.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae G54] gi|225859325|ref|YP_002740835.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae 70585] gi|237650251|ref|ZP_04524503.1| GTPase EngB [Streptococcus pneumoniae CCRI 1974] gi|237820866|ref|ZP_04596711.1| GTPase EngB [Streptococcus pneumoniae CCRI 1974M2] gi|298230527|ref|ZP_06964208.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255217|ref|ZP_06978803.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503306|ref|YP_003725246.1| GTPase [Streptococcus pneumoniae TCH8431/19A] gi|303255353|ref|ZP_07341423.1| GTPase EngB [Streptococcus pneumoniae BS455] gi|303260195|ref|ZP_07346167.1| GTPase EngB [Streptococcus pneumoniae SP-BS293] gi|303262586|ref|ZP_07348527.1| GTPase EngB [Streptococcus pneumoniae SP14-BS292] gi|303264988|ref|ZP_07350903.1| GTPase EngB [Streptococcus pneumoniae BS397] gi|303266451|ref|ZP_07352339.1| GTPase EngB [Streptococcus pneumoniae BS457] gi|303269033|ref|ZP_07354815.1| GTPase EngB [Streptococcus pneumoniae BS458] gi|307068211|ref|YP_003877177.1| putative GTPase [Streptococcus pneumoniae AP200] gi|307127778|ref|YP_003879809.1| GTP-binding protein [Streptococcus pneumoniae 670-6B] gi|54037058|sp|P64073|ENGB_STRR6 RecName: Full=Probable GTP-binding protein EngB gi|54040981|sp|P64072|ENGB_STRPN RecName: Full=Probable GTP-binding protein EngB gi|122278296|sp|Q04JI0|ENGB_STRP2 RecName: Full=Probable GTP-binding protein EngB gi|238690842|sp|B5E6L1|ENGB_STRP4 RecName: Full=Probable GTP-binding protein EngB gi|254783211|sp|C1C8F9|ENGB_STRP7 RecName: Full=Probable GTP-binding protein EngB gi|14973059|gb|AAK75655.1| GTP-binding protein [Streptococcus pneumoniae TIGR4] gi|116075969|gb|ABJ53689.1| GTP-binding protein [Streptococcus pneumoniae D39] gi|147756419|gb|EDK63460.1| GTP-binding protein [Streptococcus pneumoniae SP11-BS70] gi|147758659|gb|EDK65656.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS69] gi|147760606|gb|EDK67580.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|147760875|gb|EDK67845.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|147763299|gb|EDK70237.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75] gi|147922942|gb|EDK74058.1| GTPase EngB [Streptococcus pneumoniae SP3-BS71] gi|147924438|gb|EDK75527.1| GTP-binding protein [Streptococcus pneumoniae SP6-BS73] gi|147925823|gb|EDK76898.1| GTPase EngB [Streptococcus pneumoniae SP6-BS73] gi|147927961|gb|EDK78981.1| GTP-binding protein [Streptococcus pneumoniae SP9-BS68] gi|147929882|gb|EDK80871.1| GTPase EngB [Streptococcus pneumoniae SP23-BS72] gi|172043175|gb|EDT51221.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00] gi|183570230|gb|EDT90758.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00] gi|183572689|gb|EDT93217.1| GTP-binding protein [Streptococcus pneumoniae SP195] gi|183574254|gb|EDT94782.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04] gi|183576321|gb|EDT96849.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06] gi|183578703|gb|EDT99231.1| GTP-binding protein [Streptococcus pneumoniae MLV-016] gi|194356913|gb|ACF55361.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae G54] gi|225720438|gb|ACO16292.1| GTP-binding protein [Streptococcus pneumoniae 70585] gi|298238901|gb|ADI70032.1| GTPase [Streptococcus pneumoniae TCH8431/19A] gi|301794577|emb|CBW37021.1| putative GTP-binding protein [Streptococcus pneumoniae INV104] gi|301800399|emb|CBW33030.1| putative GTP-binding protein [Streptococcus pneumoniae OXC141] gi|301802286|emb|CBW35038.1| putative GTP-binding protein [Streptococcus pneumoniae INV200] gi|302597721|gb|EFL64797.1| GTPase EngB [Streptococcus pneumoniae BS455] gi|302636303|gb|EFL66797.1| GTPase EngB [Streptococcus pneumoniae SP14-BS292] gi|302638692|gb|EFL69155.1| GTPase EngB [Streptococcus pneumoniae SP-BS293] gi|302641423|gb|EFL71788.1| GTPase EngB [Streptococcus pneumoniae BS458] gi|302644029|gb|EFL74288.1| GTPase EngB [Streptococcus pneumoniae BS457] gi|302645507|gb|EFL75739.1| GTPase EngB [Streptococcus pneumoniae BS397] gi|306409748|gb|ADM85175.1| Predicted GTPase [Streptococcus pneumoniae AP200] gi|306484840|gb|ADM91709.1| GTP-binding protein [Streptococcus pneumoniae 670-6B] gi|327389756|gb|EGE88101.1| hypothetical protein SPAR5_1446 [Streptococcus pneumoniae GA04375] gi|332072415|gb|EGI82898.1| hypothetical protein SPAR50_1585 [Streptococcus pneumoniae GA17570] gi|332072738|gb|EGI83219.1| hypothetical protein SPAR148_1498 [Streptococcus pneumoniae GA17545] gi|332073905|gb|EGI84383.1| hypothetical protein SPAR68_1577 [Streptococcus pneumoniae GA41301] gi|332199612|gb|EGJ13687.1| hypothetical protein SPAR69_1522 [Streptococcus pneumoniae GA41317] gi|332200132|gb|EGJ14205.1| hypothetical protein SPAR93_1607 [Streptococcus pneumoniae GA47368] gi|332201009|gb|EGJ15080.1| hypothetical protein SPAR120_1514 [Streptococcus pneumoniae GA47901] Length = 195 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 SKAGMDEAWDAILEKL 195 >gi|16762431|ref|NP_458048.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16767266|ref|NP_462881.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143919|ref|NP_807261.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415847|ref|YP_152922.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62182463|ref|YP_218880.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167551521|ref|ZP_02345276.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167995106|ref|ZP_02576196.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232924|ref|ZP_02657982.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168237615|ref|ZP_02662673.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244253|ref|ZP_02669185.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263108|ref|ZP_02685081.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467330|ref|ZP_02701167.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194447921|ref|YP_002048005.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468507|ref|ZP_03074491.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736984|ref|YP_002116922.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251708|ref|YP_002148921.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264265|ref|ZP_03164339.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200387738|ref|ZP_03214350.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930344|ref|ZP_03221321.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213162853|ref|ZP_03348563.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425461|ref|ZP_03358211.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581475|ref|ZP_03363301.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213609177|ref|ZP_03369003.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213650654|ref|ZP_03380707.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852344|ref|ZP_03381876.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238913941|ref|ZP_04657778.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289829362|ref|ZP_06546974.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|54037056|sp|P64069|ENGB_SALTI RecName: Full=Probable GTP-binding protein EngB gi|54040979|sp|P64068|ENGB_SALTY RecName: Full=Probable GTP-binding protein EngB gi|75479463|sp|Q57HL3|ENGB_SALCH RecName: Full=Probable GTP-binding protein EngB gi|81599694|sp|Q5PKC6|ENGB_SALPA RecName: Full=Probable GTP-binding protein EngB gi|238690012|sp|B5EZX3|ENGB_SALA4 RecName: Full=Probable GTP-binding protein EngB gi|238690599|sp|B4TBT8|ENGB_SALHS RecName: Full=Probable GTP-binding protein EngB gi|238690710|sp|B4TPL2|ENGB_SALSV RecName: Full=Probable GTP-binding protein EngB gi|25306632|pir||AG0950 ATP/GTP-binding protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16422563|gb|AAL22840.1| putative GTPase involved in coordination of cell cycle [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504736|emb|CAD03099.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29139555|gb|AAO71121.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56130104|gb|AAV79610.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62130096|gb|AAX67799.1| putative GTPase, involved in coordination of cell cycle [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194406225|gb|ACF66444.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194454871|gb|EDX43710.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194712486|gb|ACF91707.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630199|gb|EDX48839.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197215411|gb|ACH52808.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242520|gb|EDY25140.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197289331|gb|EDY28696.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|199604836|gb|EDZ03381.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320748|gb|EDZ05950.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323760|gb|EDZ11599.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205327140|gb|EDZ13904.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205332795|gb|EDZ19559.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336858|gb|EDZ23622.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205348121|gb|EDZ34752.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|267996284|gb|ACY91169.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312915114|dbj|BAJ39088.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321225285|gb|EFX50343.1| GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613071|gb|EFY10021.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619142|gb|EFY16025.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322626008|gb|EFY22820.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626534|gb|EFY23340.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632355|gb|EFY29103.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635165|gb|EFY31886.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642758|gb|EFY39347.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647923|gb|EFY44395.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650673|gb|EFY47074.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652856|gb|EFY49193.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657171|gb|EFY53451.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662343|gb|EFY58558.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666878|gb|EFY63054.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672148|gb|EFY68263.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675870|gb|EFY71942.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681716|gb|EFY77742.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684091|gb|EFY80100.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716957|gb|EFZ08528.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323132342|gb|ADX19772.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193363|gb|EFZ78578.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197720|gb|EFZ82853.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323200708|gb|EFZ85779.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207289|gb|EFZ92241.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211490|gb|EFZ96331.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218465|gb|EGA03173.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221055|gb|EGA05487.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226030|gb|EGA10249.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231710|gb|EGA15822.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236043|gb|EGA20121.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239537|gb|EGA23586.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243871|gb|EGA27882.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249233|gb|EGA33150.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323250525|gb|EGA34408.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258979|gb|EGA42631.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260224|gb|EGA43847.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265343|gb|EGA48840.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270565|gb|EGA54011.1| GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332990829|gb|AEF09812.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 210 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VDGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAILET 209 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKLDSW 196 >gi|89092189|ref|ZP_01165143.1| hypothetical protein MED92_05238 [Oceanospirillum sp. MED92] gi|89083277|gb|EAR62495.1| hypothetical protein MED92_05238 [Oceanospirillum sp. MED92] Length = 218 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 8/201 (3%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ F + ++ P+ E+AF+GRSN GKSS IN L N LARTS PGRTQ +N Sbjct: 11 NSARFNKSAAKLHQCPEDIGAEVAFAGRSNAGKSSAINTLTNNGKLARTSKTPGRTQLIN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF L + LVD+PGYGYA+ P + W + YL +R L+ V L++D Sbjct: 71 FFDLN--------LEGVRLVDLPGYGYAKVPVEMKVHWQKHLGEYLEKRQCLQGVVLVMD 122 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K+ DQ + + + + ++LTK DKL AQ T+ K + ++ V Sbjct: 123 IRHPMKEFDQMMVEWCENSQMPLHVLLTKADKLKKGPAQSTMLKLRKELQAVLGDLVTVQ 182 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S++K++G++ LR + + Sbjct: 183 TFSALKKQGVDQLRNRLDHWL 203 >gi|309799590|ref|ZP_07693816.1| GTP-binding protein [Streptococcus infantis SK1302] gi|308116778|gb|EFO54228.1| GTP-binding protein [Streptococcus infantis SK1302] Length = 195 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR K + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKNEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 TADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 TKAGMDQAWDAILEKL 195 >gi|317502810|ref|ZP_07960914.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella salivae DSM 15606] gi|315666082|gb|EFV05645.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella salivae DSM 15606] Length = 198 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 105/199 (52%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ P + + PK PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N Sbjct: 4 KKSEFVISAPTVSMCPKDDKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A+ K +I Y+ +R + V++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGFAKRSKTVQQKLEQMIASYILQRKQMVNVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID++ +L + V + IV TK DKL A++ +K +++ P Sbjct: 115 IRHEQQKIDREFIDWLGESNVPFTIVFTKADKLGAGKAKQNAQKWMNQLKDRWETLPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TSS K+ G + L I E Sbjct: 175 ITSSEKKLGRDELLDYIDE 193 >gi|296105443|ref|YP_003615589.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059902|gb|ADF64640.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 209 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ P++ W + YL +R L+ + +L+D RH Sbjct: 71 AEGK---------RLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRMCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + + + + + +V SS Sbjct: 122 LKDLDQQMIDWAVASDIAVLVLLTKADKLASGARKAQVNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAILET 209 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKLDSW 196 >gi|310643601|ref|YP_003948359.1| gtpase engb [Paenibacillus polymyxa SC2] gi|309248551|gb|ADO58118.1| GTPase EngB [Paenibacillus polymyxa SC2] Length = 203 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 102/200 (51%), Gaps = 11/200 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ P PEIA +GRSNVGKSSLIN ++NRKNLARTS+ PG+TQ LN+ Sbjct: 5 KAEFIISAVGPDQFPVDALPEIALAGRSNVGKSSLINRMINRKNLARTSSTPGKTQQLNY 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + D + VD PGYGYA+ K + +WG +I YL ER L+ V ++D Sbjct: 65 YRIND---------ELYFVDFPGYGYAKVSKTSRKAWGQMIESYLLEREPLKLVLQMVDL 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D ++ +L + +V TK DK+ T ++ + K + P IP Sbjct: 116 RHPPSKDDIMMYDWLRHNGLPVCVVGTKADKIPKTRREKHYKVIKQELGILPGGL--FIP 173 Query: 191 TSSVKRKGIEVLRKAILETI 210 SS + G E L I I Sbjct: 174 FSSEEGMGKEELWSVISSYI 193 >gi|261418335|ref|YP_003252017.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y412MC61] gi|297529187|ref|YP_003670462.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. C56-T3] gi|319767706|ref|YP_004133207.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y412MC52] gi|261374792|gb|ACX77535.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y412MC61] gi|297252439|gb|ADI25885.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. C56-T3] gi|317112572|gb|ADU95064.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y412MC52] Length = 195 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + + P G PE+A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LN Sbjct: 4 KKAELVTSAVKPEQYPDGGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F++ D + VD+PGYG+AR K+ WG ++ Y + R L+ LL+D Sbjct: 64 FYLIND---------SFYFVDVPGYGFARVSKQERQKWGNMMETYFTTREVLKAAVLLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D ++ FL + ++ TK DK+ Q+ + + +R +I Sbjct: 115 LRHPPTKDDVMMYEFLKHYEIPVIVIATKADKVPRGKHQKHAKIARETLRM--ADGDPLI 172 Query: 190 PTSSVKRKGIEVLRKAIL 207 S+ +G + A+L Sbjct: 173 LFSAETGQGKDEAWAALL 190 >gi|85060212|ref|YP_455914.1| GTPase EngB [Sodalis glossinidius str. 'morsitans'] gi|119369261|sp|Q2NQR6|ENGB_SODGM RecName: Full=Probable GTP-binding protein EngB gi|84780732|dbj|BAE75509.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 211 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 109/196 (55%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+K+LARTS PGRT+ +N F Sbjct: 12 FVTSAPDIRHLPVDSGIEIAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTRLINLFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL R +L+ + +L+D RH Sbjct: 72 ---------ESGIRLVDLPGYGYAEVPEELKRKWQRALGEYLQMRDSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + +E L + + + +V SS Sbjct: 123 MKDLDQQMVQWAVDVNIPVLVLLTKADKLASGSRKEQLNQVREAALAF-MGDVQVETFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K++G++ LR+ + + Sbjct: 182 LKKQGVDKLRQKLDDW 197 >gi|281425242|ref|ZP_06256155.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris F0302] gi|299142639|ref|ZP_07035769.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris C735] gi|281400708|gb|EFB31539.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris F0302] gi|298575854|gb|EFI47730.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oris C735] Length = 198 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ P + PK PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N Sbjct: 4 KKSEFVISAPTVSKCPKDDKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A+ K +I Y+ +R L V++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGFAKRSKTVQQKLEQMIASYILQRKQLINVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID++ +L + V + IV TK DKL P A++ +K +++ P Sbjct: 115 IRHEQQKIDREFIDWLGESNVPFTIVFTKADKLGPGKAKQNAQKWLEQLKDRWETLPPYY 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TSS K+ G E L I E Sbjct: 175 ITSSEKKLGREELLAYIDE 193 >gi|323127109|gb|ADX24406.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 199 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 99/210 (47%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ Sbjct: 1 MAEEQVLNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLGRKNLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNIDD---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH + D ++ FL + IV TK DK+ + K + Sbjct: 112 LRAVVSLVDLRHEPSKEDVQMYEFLKYYDIPVIIVATKADKIPRGKWNKHESMVKKTLG- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I SSV R GI+ ILE + Sbjct: 171 -FDKTDRFIIFSSVDRVGIDEAWDTILEHL 199 >gi|161617123|ref|YP_001591088.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189037187|sp|A9MYC7|ENGB_SALPB RecName: Full=Probable GTP-binding protein EngB gi|161366487|gb|ABX70255.1| hypothetical protein SPAB_04962 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 210 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDRGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VDGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAILET 209 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKLDSW 196 >gi|225868472|ref|YP_002744420.1| GTP-binding protein [Streptococcus equi subsp. zooepidemicus] gi|259645907|sp|C0MEW6|ENGB_STRS7 RecName: Full=Probable GTP-binding protein EngB gi|225701748|emb|CAW99123.1| putative GTP-binding protein [Streptococcus equi subsp. zooepidemicus] Length = 199 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 104/210 (49%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M I L P+ PEIA +GRSNVGKSS IN ++ RK+LARTS+ Sbjct: 1 MSEEQILNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + LVD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNVDD---------KLRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH Q D ++ FL + IV TK DK+ + K + N Sbjct: 112 LRAVVSLVDFRHEPSQDDIQMYEFLKYYEIPVIIVATKADKVPRGRWNKHESMVKKSL-N 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + +I SSV+R GI+ ILE + Sbjct: 171 FDQTDAFII-FSSVERIGIDESWDTILEYL 199 >gi|225855010|ref|YP_002736522.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae JJA] gi|254783214|sp|C1CFF1|ENGB_STRZJ RecName: Full=Probable GTP-binding protein EngB gi|225724050|gb|ACO19903.1| GTP-binding protein [Streptococcus pneumoniae JJA] Length = 195 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHAP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 SKAGMDEAWDAILEKL 195 >gi|322391569|ref|ZP_08065038.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus peroris ATCC 700780] gi|321145652|gb|EFX41044.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus peroris ATCC 700780] Length = 195 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPEDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDFRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 TKAGMDQAWDAILEKL 195 >gi|323345334|ref|ZP_08085557.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oralis ATCC 33269] gi|323093448|gb|EFZ36026.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella oralis ATCC 33269] Length = 199 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 107/202 (52%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ P IG P PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N Sbjct: 4 KKSEFVISAPTIGKCPNDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A+ K +I Y+ +R L V++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGFAKRSKSVQKQLQQMISSYILQREQLANVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ID++ +L + ++ + I TK DKL A++ EK +++ P Sbjct: 115 IRHDPMTIDREFIDWLGESSIPFAIAFTKADKLGLVKARQNAEKWMKTLQDRWETLPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TS+ K++G + + + I E+IN Sbjct: 175 ITSAEKKQGRDEILEYI-ESIN 195 >gi|307705962|ref|ZP_07642787.1| conserved hypothetical protein [Streptococcus mitis SK564] gi|307620472|gb|EFN99583.1| conserved hypothetical protein [Streptococcus mitis SK564] Length = 195 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 SKAGMDEAWDAILEKL 195 >gi|224585811|ref|YP_002639610.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|254783207|sp|C0Q3G7|ENGB_SALPC RecName: Full=Probable GTP-binding protein EngB gi|224470339|gb|ACN48169.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 210 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VDGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRRSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAILET 209 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKLDSW 196 >gi|315613539|ref|ZP_07888446.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis ATCC 49296] gi|315314230|gb|EFU62275.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis ATCC 49296] Length = 195 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 SKAGMDQAWDAILEKL 195 >gi|270292404|ref|ZP_06198615.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. M143] gi|270278383|gb|EFA24229.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. M143] Length = 197 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 13 LLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 72 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 73 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 123 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 124 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 181 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 182 SKAGMDQAWDAILEKL 197 >gi|225857194|ref|YP_002738705.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pneumoniae P1031] gi|254783215|sp|C1CLR7|ENGB_STRZP RecName: Full=Probable GTP-binding protein EngB gi|225725684|gb|ACO21536.1| GTP-binding protein [Streptococcus pneumoniae P1031] Length = 195 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 SKAGMDEAWDAILEKL 195 >gi|161984817|ref|YP_410156.2| ribosome biogenesis GTP-binding protein YsxC [Shigella boydii Sb227] gi|119369256|sp|Q31UD0|ENGB_SHIBS RecName: Full=Probable GTP-binding protein EngB gi|320185488|gb|EFW60256.1| GTP-binding protein EngB [Shigella flexneri CDC 796-83] gi|332088563|gb|EGI93677.1| hypothetical protein SB359474_4457 [Shigella boydii 3594-74] Length = 210 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRHSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|332764612|gb|EGJ94844.1| cell division protein putative checkpoint GTPase [Shigella flexneri 2930-71] Length = 207 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 8 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 68 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 119 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKALLNMVREAVLAF-NGDVQVETFSS 177 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 178 LKKQGVDKLRQKL 190 >gi|161485827|ref|NP_709663.3| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 2a str. 301] gi|161486407|ref|NP_839017.2| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 2a str. 2457T] gi|119369258|sp|Q83PF4|ENGB_SHIFL RecName: Full=Probable GTP-binding protein EngB gi|281603253|gb|ADA76237.1| putative GTP-binding protein engB [Shigella flexneri 2002017] gi|313647097|gb|EFS11552.1| hypothetical protein SF2457T_4463 [Shigella flexneri 2a str. 2457T] gi|332751497|gb|EGJ81898.1| hypothetical protein SFK671_4264 [Shigella flexneri K-671] gi|332753187|gb|EGJ83570.1| hypothetical protein SF274771_4128 [Shigella flexneri 2747-71] gi|332997588|gb|EGK17203.1| hypothetical protein SFVA6_4456 [Shigella flexneri VA-6] gi|332998615|gb|EGK18212.1| hypothetical protein SFK218_4644 [Shigella flexneri K-218] gi|333013840|gb|EGK33202.1| hypothetical protein SFK304_4498 [Shigella flexneri K-304] Length = 210 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKALLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|329116776|ref|ZP_08245493.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parauberis NCFD 2020] gi|326907181|gb|EGE54095.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parauberis NCFD 2020] Length = 199 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 98/210 (46%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P PEIA +GRSNVGKSS IN ++ RKNLARTS+ Sbjct: 1 MAEEQLLNTHNASILLSAANQSHYPDDDLPEIALAGRSNVGKSSFINTILGRKNLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNIDD---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTTRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH D ++ FL + +V TK DK+ + K + Sbjct: 112 LRAVVSLVDLRHEPSTEDVQMYDFLKYYEIPVIVVATKADKIPRGKWNKHESMVKKKLN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + I SSV R GI+ IL+ I Sbjct: 171 -FDKSDQFIVFSSVDRIGIDQAWDTILDQI 199 >gi|251782260|ref|YP_002996562.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390889|dbj|BAH81348.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 199 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 100/210 (47%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ Sbjct: 1 MAEEQVLNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLGRKNLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNIDD---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH + D ++ FL + IV TK DK+ + K + Sbjct: 112 LRAVVSLVDLRHEPSKEDVQMYEFLKYYDIPVIIVATKADKIPRGKWNKHESMVKKTLGF 171 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 T I SSV R GI+ ILE + Sbjct: 172 DKTDC--FIIFSSVDRVGIDEAWDTILEHL 199 >gi|322515140|ref|ZP_08068143.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus ureae ATCC 25976] gi|322118854|gb|EFX91044.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus ureae ATCC 25976] Length = 206 Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 106/200 (53%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N Sbjct: 7 HKTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F P LVD+PGYGYA P++ W + YL +R LR V +L+D Sbjct: 67 LFEV---------EPNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMD 117 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + ++LTK DKLS + +T++ + I + +V Sbjct: 118 IRHPLKDLDQQMIEWAVSTQLPVLLLLTKADKLSQSARSKTVKMVREAILPFQ-GDIQVE 176 Query: 190 PTSSVKRKGIEVLRKAILET 209 S++ + GI+ L + Sbjct: 177 AYSALNKIGIDKLSDKLDSW 196 >gi|306829877|ref|ZP_07463064.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis ATCC 6249] gi|304427888|gb|EFM30981.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mitis ATCC 6249] Length = 195 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 SKAGMDQAWDAILEKL 195 >gi|222152936|ref|YP_002562113.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus uberis 0140J] gi|254783213|sp|B9DU74|ENGB_STRU0 RecName: Full=Probable GTP-binding protein EngB gi|222113749|emb|CAR41756.1| putative GTP-binding protein [Streptococcus uberis 0140J] Length = 199 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 98/210 (46%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PEIA +GRSNVGKSS IN L+ RKNLARTS Sbjct: 1 MAEEQVLNTHNASLLLSAANKSHYPEDDIPEIALAGRSNVGKSSFINTLLGRKNLARTSG 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNIDD---------KIRFVDVPGYGYAKVSKVERARWGKMIEEYLTSRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH D ++ FL + +V TK DK+ + K + Sbjct: 112 LRAVVSLVDLRHEPSTEDVQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESMIKKKLN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I SSV R GI+ AILE I Sbjct: 171 -FEQEDAFILFSSVDRIGIDQAWDAILEQI 199 >gi|306824843|ref|ZP_07458187.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433054|gb|EFM36026.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 195 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 SKAGMDQAWNAILEKL 195 >gi|119369192|sp|Q0TAJ6|ENGB_ECOL5 RecName: Full=Probable GTP-binding protein EngB Length = 210 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 ADGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++ ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIEWAVDSNIAVLVLLTKTDKLASGARKAQLNMVREAVLAF-NGDVQVETFSS 180 Query: 194 VKRKGIEVLRKAI 206 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKL 193 >gi|313206541|ref|YP_004045718.1| ribosome biogenesis GTP-binding protein ysxc [Riemerella anatipestifer DSM 15868] gi|312445857|gb|ADQ82212.1| ribosome biogenesis GTP-binding protein YsxC [Riemerella anatipestifer DSM 15868] gi|315023518|gb|EFT36522.1| GTP-binding protein EngB [Riemerella anatipestifer RA-YM] gi|325336011|gb|ADZ12285.1| Predicted GTPase [Riemerella anatipestifer RA-GD] Length = 208 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 9/200 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F++ + P+A PE AF GRSNVGKSSLIN + KNLA+TS PG+TQ +N Sbjct: 5 KSAEFVKSSQKWQECPEANLPEYAFIGRSNVGKSSLINAITGNKNLAKTSQTPGKTQLIN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + L D+PGYGYA+ K + LI Y+ R L +++L+D Sbjct: 65 HFIINE---------EWYLTDLPGYGYAKVSKTQRKDFEKLITNYILNRKNLVNLFILVD 115 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID + + + + + IV TK DKL P A++ +E + P++ Sbjct: 116 IRHTPQKIDLEFIEWCGESGIPFSIVFTKEDKLKPNAAKKNVEDYTKTLLESWEEAPQMY 175 Query: 190 PTSSVKRKGIEVLRKAILET 209 TS+ K+ G E + + I +T Sbjct: 176 ITSAEKKTGTEAILEYIEQT 195 >gi|317050145|ref|YP_004117793.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. At-9b] gi|316951762|gb|ADU71237.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. At-9b] Length = 213 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVLSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 VEGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLQKRQALKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + +V SS Sbjct: 122 LKDLDQQMIEWAVQSEIPVLVLLTKADKLASGARKAQLNMVREASLAFQ-GDVQVEMFSS 180 Query: 194 VKRKGIEVLRKAILET 209 +K+ G++ LR+ + Sbjct: 181 LKKLGVDKLRQKLDSW 196 >gi|168821667|ref|ZP_02833667.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443397|ref|YP_002043224.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|198244514|ref|YP_002217923.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|238690342|sp|B5FNZ2|ENGB_SALDC RecName: Full=Probable GTP-binding protein EngB gi|238693565|sp|B4SZ98|ENGB_SALNS RecName: Full=Probable GTP-binding protein EngB gi|194402060|gb|ACF62282.1| putative GTP-binding protein EngB [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197939030|gb|ACH76363.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205341881|gb|EDZ28645.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088406|emb|CBY98165.1| probable GTP-binding protein engB [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326625712|gb|EGE32057.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629545|gb|EGE35888.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 210 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VEGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAILET 209 +K++G++ LR+ + Sbjct: 181 LKKQGVDKLRQKLDSW 196 >gi|322375631|ref|ZP_08050143.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. C300] gi|321279339|gb|EFX56380.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. C300] Length = 197 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 13 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 72 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 73 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 123 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 124 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 181 Query: 195 KRKGIEVLRKAILETI 210 + G++ ILE + Sbjct: 182 TKAGMDQAWDTILEKL 197 >gi|254293246|ref|YP_003059269.1| GTP-binding protein HSR1-related [Hirschia baltica ATCC 49814] gi|254041777|gb|ACT58572.1| GTP-binding protein HSR1-related [Hirschia baltica ATCC 49814] Length = 213 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 92/201 (45%), Positives = 123/201 (61%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F++GV + LP A PEIAF+GRSNVGKSSLIN L NRK LAR S PGRTQ +N Sbjct: 22 SEVNFVKGVVNMQGLPPADRPEIAFAGRSNVGKSSLINALFNRKQLARASGQPGRTQEIN 81 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF L A+ +VD+PGYG+A+APK VD W YL R+ L+ V+LLID Sbjct: 82 FFTI---------LEALYVVDLPGYGFAKAPKAVVDKWTNFTQTYLRGRTNLQRVFLLID 132 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R GV +D+ + LD+ A++YQIVLTK DKL + + ++ I+ P AHP ++ Sbjct: 133 SRRGVGDVDRGIMKVLDRAALNYQIVLTKADKLKKSELDKVIDDAVVAIKKNPAAHPRIM 192 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TS+ K G+ L+ I+ + Sbjct: 193 LTSAEKNIGLPELKAEIVALL 213 >gi|138896215|ref|YP_001126668.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus thermodenitrificans NG80-2] gi|196250171|ref|ZP_03148865.1| small GTP-binding protein [Geobacillus sp. G11MC16] gi|166225956|sp|A4IRG9|ENGB_GEOTN RecName: Full=Probable GTP-binding protein EngB gi|134267728|gb|ABO67923.1| GTP-binding protein-like protein [Geobacillus thermodenitrificans NG80-2] gi|196210355|gb|EDY05120.1| small GTP-binding protein [Geobacillus sp. G11MC16] Length = 195 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 103/197 (52%), Gaps = 11/197 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + + P +G PE+A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF Sbjct: 5 KAELVISAVKPEQYPDSGRPEVALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 ++ D + VD+PGYG+AR K+ WG ++ Y + R TL+ LL+D Sbjct: 65 YLIND---------SFYFVDVPGYGFARVSKQERQKWGKMMETYFTTRETLKAALLLVDL 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D ++ F + ++ TK DK+ Q+ + + +R A +I Sbjct: 116 RHPPTKDDVMMYEFFKHYEIPVIVIATKADKVPRGKQQKHAKIARETLR--LAAGDSLIL 173 Query: 191 TSSVKRKGIEVLRKAIL 207 SS +G E A+L Sbjct: 174 FSSETGQGKEEAWAALL 190 >gi|228473700|ref|ZP_04058448.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga gingivalis ATCC 33624] gi|228274847|gb|EEK13664.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga gingivalis ATCC 33624] Length = 200 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P PE AF GRSNVGKSSLIN+L N K LA+TS+ PG+TQ +N F+ Sbjct: 8 FVVSNTQVAKCPTHKLPEYAFIGRSNVGKSSLINMLTNHKGLAKTSSKPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ K++ ++ I Y +R L ++L+D RH Sbjct: 68 N---------KEWYLVDLPGYGYAKVSKQSKKTFQQFITDYFKKRRELVNAFVLVDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L + A+ + IV TK DKL+ QE + ++ P TSS Sbjct: 119 PQKIDLEFMQWLGENAIPFAIVFTKADKLTEKQIQEHVTSYSEILLQQWEEMPPYFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 R G E L I ETIN Sbjct: 179 ENRLGKEDLLSYI-ETIN 195 >gi|251793793|ref|YP_003008523.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter aphrophilus NJ8700] gi|247535190|gb|ACS98436.1| GTP-binding protein [Aggregatibacter aphrophilus NJ8700] Length = 204 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P + LP+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSDIKLNYHKTHFLTSAPNLKSLPEDSGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPQCKLVDLPGYGYAAVPEQMKQQWQHALGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGIIVLMDIRHPLKDLDQQMIEWAVSADLPILLLLTKADKLSQSERSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V S++KR GI+ L + Sbjct: 172 Q-GDIQVEAFSALKRTGIDRLAAKLDSW 198 >gi|126700919|ref|YP_001089816.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile 630] gi|260684844|ref|YP_003216129.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile CD196] gi|260688502|ref|YP_003219636.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile R20291] gi|115252356|emb|CAJ70197.1| GTP-binding protein EngB; putative endoglucanase [Clostridium difficile] gi|260211007|emb|CBA66315.1| probable GTP-binding protein [Clostridium difficile CD196] gi|260214519|emb|CBE07030.1| probable GTP-binding protein [Clostridium difficile R20291] Length = 194 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 109/196 (55%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P G PEIA +GRSNVGKSS+IN L+NR+N ARTS PG+T+ +NF++ + Sbjct: 1 MSAVNKSQYPAEGIPEIALAGRSNVGKSSIINTLLNRRNFARTSQTPGKTRTINFYLINN 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 VD+PGYGYA+ K + WGG++ RYL R L ++LL+D RH Sbjct: 61 ---------EFYFVDLPGYGYAKIAKSEKEKWGGIMERYLESRQELCSIFLLVDIRHEPT 111 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D+ ++ ++ + ++ TK DK+S Q+ + + ++ + +VIP SS+K Sbjct: 112 ADDKLMYEWIKHFGYNCVVIATKADKISRGQYQKHISIIRKKLQM--ESSEKVIPVSSLK 169 Query: 196 RKGIEVLRKAILETIN 211 + G+E L + I+ N Sbjct: 170 KTGVEELWEEIVNQYN 185 >gi|218530581|ref|YP_002421397.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium chloromethanicum CM4] gi|240138938|ref|YP_002963413.1| putative GTP-binding protein engB [Methylobacterium extorquens AM1] gi|254561546|ref|YP_003068641.1| GTP-binding protein engB [Methylobacterium extorquens DM4] gi|218522884|gb|ACK83469.1| GTP-binding protein HSR1-related [Methylobacterium chloromethanicum CM4] gi|240008910|gb|ACS40136.1| putative GTP-binding protein engB [Methylobacterium extorquens AM1] gi|254268824|emb|CAX24785.1| putative GTP-binding protein engB [Methylobacterium extorquens DM4] Length = 219 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 99/205 (48%), Positives = 121/205 (59%), Gaps = 10/205 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F SA F P +G LP EIAF+GRSNVGKSSL+N L R LARTS+ PGRT Sbjct: 20 LFAGSA-DFATAAPALGALPPMEGVEIAFAGRSNVGKSSLVNALTGRNTLARTSHTPGRT 78 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF + + LVDMPGYGYA K V++W LI YL RS L VY Sbjct: 79 QQLNFFRIGER---------LTLVDMPGYGYAAVEKAKVEAWTKLIHAYLKGRSNLARVY 129 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K+ID D+ LDK AVSYQIVLTK D L ++ + + P A+ Sbjct: 130 LLIDSRHGLKEIDTDLLDGLDKAAVSYQIVLTKGDALKKAEIEKRIAGIHAALAKRPAAY 189 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PEV+ TSS +G+ LR +I + Sbjct: 190 PEVLLTSSRDDRGVAELRASIARLL 214 >gi|163851773|ref|YP_001639816.1| GTPase EngB [Methylobacterium extorquens PA1] gi|163663378|gb|ABY30745.1| GTP-binding protein HSR1-related [Methylobacterium extorquens PA1] Length = 256 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 99/205 (48%), Positives = 121/205 (59%), Gaps = 10/205 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F SA F P +G LP EIAF+GRSNVGKSSL+N L R LARTS+ PGRT Sbjct: 57 LFAGSA-DFATAAPALGALPPMEGVEIAFAGRSNVGKSSLVNALTGRNTLARTSHTPGRT 115 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF + + LVDMPGYGYA K V++W LI YL RS L VY Sbjct: 116 QQLNFFRIGER---------LTLVDMPGYGYAAVEKAKVEAWTKLIHAYLKGRSNLARVY 166 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LLID RHG+K+ID D+ LDK AVSYQIVLTK D L ++ + + P A+ Sbjct: 167 LLIDSRHGLKEIDTDLLDGLDKAAVSYQIVLTKGDALKKAEIEKRIAGIHAALAKRPAAY 226 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PEV+ TSS +G+ LR +I + Sbjct: 227 PEVLLTSSRDDRGVAELRASIARLL 251 >gi|219872202|ref|YP_002476577.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus parasuis SH0165] gi|254783198|sp|B8F8H7|ENGB_HAEPS RecName: Full=Probable GTP-binding protein EngB gi|219692406|gb|ACL33629.1| GTPase EngB [Haemophilus parasuis SH0165] Length = 209 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 107/201 (53%), Gaps = 10/201 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 ++ FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MTEIKLNYHKTHFLTSAPDIRHLPEDSGVEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEQVKLQWQRSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 R V +L+D RH +K +DQ + + + ++LTK DKLS + +T++ + I + Sbjct: 112 RGVVILMDIRHPLKDLDQQMIEWAVSAELPVLLLLTKADKLSQSARSKTVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVL 202 +V S++ R GI+ L Sbjct: 172 Q-GDVQVEAYSALNRIGIDKL 191 >gi|293365854|ref|ZP_06612559.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis ATCC 35037] gi|307703277|ref|ZP_07640222.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] gi|291315678|gb|EFE56126.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus oralis ATCC 35037] gi|307623143|gb|EFO02135.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037] Length = 195 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 SKAGMDQAWDAILEKL 195 >gi|119475280|ref|ZP_01615633.1| GTP-binding protein XF1430 [marine gamma proteobacterium HTCC2143] gi|119451483|gb|EAW32716.1| GTP-binding protein XF1430 [marine gamma proteobacterium HTCC2143] Length = 202 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 13/204 (6%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 H F ++ F ++ P E+AF+GRSN GKSS IN L + K +ARTS P Sbjct: 4 KHIDFRQAE--FRTSAAKLADCPSDDGCEVAFAGRSNAGKSSAINTLTDNKRMARTSKTP 61 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LNFF + LVD+PGYG+A+ P + W + YL ER +L Sbjct: 62 GRTQLLNFFDVGERQ---------RLVDLPGYGFAKVPLAVKEKWQRHLGEYLRERESLA 112 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 + LL+DCRH +++ D+ + ++ + + I+LTK DKL A L K + ++ Sbjct: 113 GLVLLMDCRHPLQEFDRMMLAWAEGCEMPVHILLTKADKLKKGPANSVLLKVREELKQ-- 170 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAI 206 + S++KR G++ LR+ + Sbjct: 171 QELVSIQLFSALKRTGLDQLREKL 194 >gi|165975551|ref|YP_001651144.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|303251917|ref|ZP_07338088.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307244896|ref|ZP_07526994.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247073|ref|ZP_07529126.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249295|ref|ZP_07531290.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307258306|ref|ZP_07540048.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262677|ref|ZP_07544306.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165875652|gb|ABY68700.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|302649347|gb|EFL79532.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854218|gb|EFM86425.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856442|gb|EFM88592.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858694|gb|EFM90755.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306867645|gb|EFM99491.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306872005|gb|EFN03720.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 206 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N Sbjct: 7 HKTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F P LVD+PGYGYA P++ W + YL +R LR V +L+D Sbjct: 67 LFEV---------EPNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMD 117 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + ++LTK DKLS + +T++ + I + +V Sbjct: 118 IRHPLKDLDQQMIEWAVSAQLPVLLLLTKADKLSQSARSKTVKMVREAILPFQ-GDIQVE 176 Query: 190 PTSSVKRKGIEVL 202 S++ + GI+ L Sbjct: 177 AYSALNKVGIDKL 189 >gi|218708175|ref|YP_002415796.1| putative GTP-binding protein EngB [Vibrio splendidus LGP32] gi|218321194|emb|CAV17144.1| Probable GTP-binding protein engB [Vibrio splendidus LGP32] Length = 269 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + N+K+LA+TS PGRTQ +N F Sbjct: 62 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKSLAKTSKTPGRTQLINLFKV 121 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL R +L+ + +L+D RH Sbjct: 122 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQRRESLKGLVVLMDIRHP 172 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + L K + +++ V SS Sbjct: 173 MKDLDQQMIYWAIDSRIPVQVLLTKADKLKSGARKAQLLKIRNDAKSF-GGDVAVDVFSS 231 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR + E Sbjct: 232 MKGIGVDQLRAKMDEW 247 >gi|225175196|ref|ZP_03729192.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1] gi|225169372|gb|EEG78170.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1] Length = 197 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 102/201 (50%), Gaps = 11/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ P PE+AF GRSNVGKS+L+N LVNRK LA TS PG+T+ +N Sbjct: 4 KSAEFIISAAGAEQFPTDMLPEVAFVGRSNVGKSTLLNSLVNRKKLALTSGNPGKTRLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF+ + A D+PGYG+AR + WG LI YL R TL+ V L+D Sbjct: 64 FFLINE---------AFYFADLPGYGFARVSHEMKKQWGLLIENYLQTRETLQVVAQLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D ++ +L + IV TK DK+S Q+ +++ + + + VI Sbjct: 115 LRHPPTADDLAMYQWLIHFNIPTIIVATKADKISRGNRQKHVKQVREGLG--LGSQGPVI 172 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ +G + + K I + + Sbjct: 173 MFSAKTGEGKDDIWKVIQQFV 193 >gi|32035822|ref|ZP_00135658.1| COG0218: Predicted GTPase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207582|ref|YP_001052807.1| ribosome biogenesis GTP-binding protein YsxC [Actinobacillus pleuropneumoniae L20] gi|303250228|ref|ZP_07336429.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251616|ref|ZP_07533522.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307260548|ref|ZP_07542241.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126096374|gb|ABN73202.1| putative GTP-binding protein EngB [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302650939|gb|EFL81094.1| GTPase EngB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860927|gb|EFM92934.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306869777|gb|EFN01561.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 206 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N Sbjct: 7 HKTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F P LVD+PGYGYA P++ W + YL +R LR V +L+D Sbjct: 67 LFEV---------EPNCKLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRECLRGVVILMD 117 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + ++LTK DKLS + +T++ + I + +V Sbjct: 118 IRHPLKDLDQQMIEWAVSAQLPVLLLLTKADKLSQSARSKTVKMVREAILPFQ-GDIQVE 176 Query: 190 PTSSVKRKGIEVL 202 S++ + GI+ L Sbjct: 177 AYSALNKVGIDKL 189 >gi|296134050|ref|YP_003641297.1| ribosome biogenesis GTP-binding protein YsxC [Thermincola sp. JR] gi|296032628|gb|ADG83396.1| ribosome biogenesis GTP-binding protein YsxC [Thermincola potens JR] Length = 205 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 103/200 (51%), Gaps = 11/200 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A F+ P P G PEIAF+GRSNVGKSSLIN L NRK LA+TS+ PG+TQ LNF Sbjct: 5 AAEFIISAPGPKQYPVEGYPEIAFAGRSNVGKSSLINTLTNRKGLAKTSSRPGKTQLLNF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 ++ ++ VD+PGYG+AR K+ WG +I YL R L V LID Sbjct: 65 YLIN---------KSLYFVDLPGYGFARVSKETKSYWGKMIENYLKNREELVAVVQLIDI 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D + +L + +VL K DK++ + + + + P V+ Sbjct: 116 RHAPSRDDITMHQWLKHYRIPTVLVLNKADKITRGKWAQHAKIIRQSL--MPAPETPVVV 173 Query: 191 TSSVKRKGIEVLRKAILETI 210 S+ R+G E L + + + Sbjct: 174 FSAETRQGREELLGILDKMV 193 >gi|262172870|ref|ZP_06040548.1| GTP-binding protein EngB [Vibrio mimicus MB-451] gi|261893946|gb|EEY39932.1| GTP-binding protein EngB [Vibrio mimicus MB-451] Length = 219 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 AE---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + +N+ +V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKNF-GGDVQVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + + Sbjct: 182 LSGIGVDTLRAKLDQW 197 >gi|313203549|ref|YP_004042206.1| ribosome biogenesis GTP-binding protein ysxc [Paludibacter propionicigenes WB4] gi|312442865|gb|ADQ79221.1| ribosome biogenesis GTP-binding protein YsxC [Paludibacter propionicigenes WB4] Length = 198 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 109/202 (53%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + P + PE AF GRSNVGKSSLIN+L NRK+LA TS+ PG+T +N Sbjct: 4 KSAEFIISNTDYLKCPDSKLPEYAFIGRSNVGKSSLINMLCNRKDLAMTSSRPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYGYA A KK D +I Y+ R L C++LLID Sbjct: 64 HFLIN---------KNWHLVDLPGYGYATAGKKMRDQLQDIIESYILNREQLTCLFLLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 CRH ++ID + +L + V + IV TK+DKL+ + ++ K + P + Sbjct: 115 CRHEPQKIDLEFMEWLGENGVPFSIVFTKLDKLTHAKGKSNVQAYKDKLSEQWEELPPIF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS KR G + + I E IN Sbjct: 175 LTSSEKRTGRDEILGYI-EGIN 195 >gi|330993394|ref|ZP_08317329.1| putative GTP-binding protein engB [Gluconacetobacter sp. SXCC-1] gi|329759424|gb|EGG75933.1| putative GTP-binding protein engB [Gluconacetobacter sp. SXCC-1] Length = 221 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 87/208 (41%), Positives = 117/208 (56%), Gaps = 10/208 (4%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 +F + F+ G ++G LP PEIAF+GRSNVGKSSLIN L R+ LAR S+ PG Sbjct: 21 RVLFA-GEFNFVFGAQKLGQLPDPILPEIAFAGRSNVGKSSLINALTGRRALARASSEPG 79 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RT+ LNFF + LVDMPGYG+A+A + + W G++ YL R TLR Sbjct: 80 RTKQLNFFEMAHR---------LTLVDMPGYGFAKAARAVKEDWQGMMFSYLRGRPTLRR 130 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 V LL+D R VK D+++ LD+ AV++Q+VLTK D P L + ++ + Sbjct: 131 VVLLLDSRVEVKASDREIMKMLDRAAVTFQVVLTKCDVPKPNALAAKLREVSEIVATHAA 190 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETIN 211 A P V+ TSS GIE LR + N Sbjct: 191 AFPHVLATSSETGLGIEDLRAELARLAN 218 >gi|312865357|ref|ZP_07725585.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus downei F0415] gi|311099468|gb|EFQ57684.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus downei F0415] Length = 199 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 97/210 (46%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PE+A +GRSNVGKSS IN L+NRK LARTS+ Sbjct: 1 MTQEEVLNTHNASILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLNRKKLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNF+ D + VD+PGYGYA+ K WG +I YL R Sbjct: 61 KPGKTQLLNFYNIDD---------KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH D ++ FL + IV TK DK+ + K + Sbjct: 112 LRVVVSLVDLRHEPTADDVQMYDFLKYYGIPVIIVATKADKVPRGKWNKQESLIKKKLN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I SS ++G ++ ILE + Sbjct: 171 -FDKQDSFIVFSSETKEGYDLAWDTILEKL 199 >gi|91974552|ref|YP_567211.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris BisB5] gi|119369246|sp|Q13F29|ENGB_RHOPS RecName: Full=Probable GTP-binding protein EngB gi|91681008|gb|ABE37310.1| GTP-binding [Rhodopseudomonas palustris BisB5] Length = 217 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 96/202 (47%), Positives = 122/202 (60%), Gaps = 7/202 (3%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTSN PGRTQ L Sbjct: 19 GDWHFIWASPSIETLPPMAGIEVAFAGRSNVGKSSLINALTGRNALARTSNTPGRTQELI 78 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + L LVDMPGYGYA A K V SW LI ++L R+TL VY+LID Sbjct: 79 FFDGPTDAGL-------RLVDMPGYGYAAASKAKVASWTSLIHKFLQGRATLARVYVLID 131 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K +D D+ LDK AVSYQIV TK D++ ++ + TK ++ +P A PE++ Sbjct: 132 GRHGLKDVDLDILKTLDKSAVSYQIVFTKADQVKAAELEQRIAATKTVLAKHPAAFPELL 191 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS G+ LR A++ ++ Sbjct: 192 MTSSRTGAGMPELRAAMIRLLD 213 >gi|323351644|ref|ZP_08087298.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis VMC66] gi|322122130|gb|EFX93856.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis VMC66] Length = 195 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLRYYNIPVILVATKADKIPRGKWNKHESAIKKKLD--FDKNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 TKDGLDAAWDAILSKI 195 >gi|116512007|ref|YP_809223.1| GTPase EngB [Lactococcus lactis subsp. cremoris SK11] gi|125624159|ref|YP_001032642.1| GTPase EngB [Lactococcus lactis subsp. cremoris MG1363] gi|13124218|sp|Q9L6G1|ENGB_LACLM RecName: Full=Probable GTP-binding protein EngB gi|123320395|sp|Q02Z21|ENGB_LACLS RecName: Full=Probable GTP-binding protein EngB gi|7546984|gb|AAF63739.1|AF236863_3 hypothetical GTP-binding protein [Lactococcus lactis subsp. cremoris MG1363] gi|24935311|gb|AAN64304.1| YsxL protein [Lactococcus lactis subsp. cremoris MG1363] gi|116107661|gb|ABJ72801.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11] gi|124492967|emb|CAL97930.1| Probable GTP-binding protein engB [Lactococcus lactis subsp. cremoris MG1363] gi|300070935|gb|ADJ60335.1| ribosome biogenesis GTP-binding protein YsxC [Lactococcus lactis subsp. cremoris NZ9000] Length = 195 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 74/195 (37%), Positives = 100/195 (51%), Gaps = 11/195 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+ PEIA +GRSNVGKSS IN L+NRKN ARTS PG+TQ LNF+ D Sbjct: 12 ISAASKKQYPENDWPEIALAGRSNVGKSSFINTLLNRKNFARTSGQPGKTQLLNFYNIDD 71 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH Sbjct: 72 ---------QLHFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLKAVVSLVDIRHEPS 122 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D ++ FL + +V TK DK+ + K ++ + + I SS Sbjct: 123 EDDLMMYEFLKYYHIPVILVATKADKVPRGKWNKHESIIKKAMK--FDSTDDFIIFSSTD 180 Query: 196 RKGIEVLRKAILETI 210 + GIE AIL+ + Sbjct: 181 KTGIEEAWTAILKYL 195 >gi|331675323|ref|ZP_08376073.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA280] gi|331685601|ref|ZP_08386184.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H299] gi|12518743|gb|AAG59053.1|AE005617_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|331067383|gb|EGI38788.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA280] gi|331077072|gb|EGI48287.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H299] Length = 199 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 10/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 1 MMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVA 60 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH + Sbjct: 61 DGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K +DQ + + ++ ++LTK DKL+ + L + + + +V SS+ Sbjct: 112 KDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSL 170 Query: 195 KRKGIEVLRKAILETIN 211 K++G++ LR+ + N Sbjct: 171 KKQGVDKLRQKLDTWFN 187 >gi|192361932|ref|YP_001983930.1| putative GTPase [Cellvibrio japonicus Ueda107] gi|190688097|gb|ACE85775.1| putative GTPase, involved in coordination of cell cycle (EngB) [Cellvibrio japonicus Ueda107] Length = 219 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 12/212 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + F K+ FL P I P E+AF+GRSN GKSS IN L N LARTS Sbjct: 1 MSTPIAFGKA--RFLTSAPSIRQCPPETGREVAFAGRSNAGKSSAINALTNNHRLARTSK 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ +NFF D + LVD+PGYGYA+ ++ + W + YL R T Sbjct: 59 TPGRTQLINFFTLGDEA--------YRLVDLPGYGYAKVSRELKEQWQRDLSEYLERRKT 110 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ + LL+D RH +++ D + + + + I+LTK DKLS + TL K ++N Sbjct: 111 LQGLVLLMDIRHPLQEFDSAILHWAMQGQMPVHILLTKADKLSRSQVNNTLFKVHKELKN 170 Query: 181 YPTAHPE--VIPTSSVKRKGIEVLRKAILETI 210 + + P S++ G++ L+ + + Sbjct: 171 LGLHDNKLSLQPFSALSNSGVDELKSVLQSWL 202 >gi|331265986|ref|YP_004325616.1| GTP-binding protein, putative [Streptococcus oralis Uo5] gi|326682658|emb|CBZ00275.1| GTP-binding protein, putative [Streptococcus oralis Uo5] Length = 195 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 80/196 (40%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTTRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + P+ + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESAIKKKLNFDPS--DDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE + Sbjct: 180 SKVGMDQAWDAILEKL 195 >gi|260911896|ref|ZP_05918462.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 472 str. F0295] gi|260634012|gb|EEX52136.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 472 str. F0295] Length = 201 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 78/195 (40%), Positives = 104/195 (53%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P IGL PK E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTLSAPSIGLCPKDNKIEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+A+ K +I Y+ +R L +++LID RH Sbjct: 68 ND---------SWYLVDLPGYGFAKRSKTVQQKLQQMISSYILQREQLVNLFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + V + IV TK DKL A++ EK + + P TSS Sbjct: 119 QQKIDREFIDWLGESGVPFTIVFTKADKLGLVKAKQNAEKWMKQLEDSWEEQPPYFITSS 178 Query: 194 VKRKGIEVLRKAILE 208 KR G E L I E Sbjct: 179 EKRIGREELLNYIDE 193 >gi|304382687|ref|ZP_07365181.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella marshii DSM 16973] gi|304336312|gb|EFM02554.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella marshii DSM 16973] Length = 202 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ P + P PE AF GRSNVGKSSLIN+L N KNLA+TS PG+T +N Sbjct: 4 KKSEFVISSPTVQKCPADTKPEYAFIGRSNVGKSSLINMLCNHKNLAKTSATPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGYA+ K +I Y+ +R L V++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGYAKRSKTVQQQLSRMITSYILQRKQLINVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +Q D++ +L + ++ + IV TK DKL A++ +E +++ P Sbjct: 115 IRHEAQQNDREFIDWLGESSIPFAIVFTKADKLGAVKARQNVEAYMNALKDRWEELPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TS+ KR G + L I + Sbjct: 175 ITSAEKRTGRDELLNYIDD 193 >gi|228471282|ref|ZP_04056088.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas uenonis 60-3] gi|228306924|gb|EEK16022.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas uenonis 60-3] Length = 203 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 9/200 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F++ P + P++ PE AF GRSNVGKSSLIN+L K LA TS PG+TQ +N Sbjct: 4 HSATFVQSSPSVKSCPQSTLPEYAFIGRSNVGKSSLINMLTGHKGLAMTSQKPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGYAR + + + LI +Y+S+R L +++L+D Sbjct: 64 HFLINQ---------SWHLVDLPGYGYARRSLEQREQFRKLITQYVSKREALVNLFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID + + + +K + + IV TK DK+ QE +E + + P + Sbjct: 115 IRHEPQRIDLEFINEMGEKGIPFSIVFTKADKIGKQVQQEAVEAYRSRLLEDWEELPPLF 174 Query: 190 PTSSVKRKGIEVLRKAILET 209 TS+ G + L I + Sbjct: 175 VTSASTGMGRDELLDYIDQL 194 >gi|167854567|ref|ZP_02477348.1| putative GTP-binding protein EngB [Haemophilus parasuis 29755] gi|167854322|gb|EDS25555.1| putative GTP-binding protein EngB [Haemophilus parasuis 29755] Length = 209 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 107/201 (53%), Gaps = 10/201 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 ++ FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MTEIKLNYHKTHFLTSAPDIHHLPEDSGVEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEQVKLQWQRSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 R V +L+D RH +K +DQ + + + ++LTK DKLS + +T++ + I + Sbjct: 112 RGVVILMDIRHPLKDLDQQMIEWAVSAKLPVLLLLTKADKLSQSARSKTVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVL 202 +V S++ R GI+ L Sbjct: 172 Q-GDVQVEAYSALNRIGIDKL 191 >gi|58040259|ref|YP_192223.1| ribosome biogenesis GTP-binding protein YsxC [Gluconobacter oxydans 621H] gi|81556980|sp|Q5FPX9|ENGB_GLUOX RecName: Full=Probable GTP-binding protein EngB gi|58002673|gb|AAW61567.1| Probable GTP-binding protein EngB [Gluconobacter oxydans 621H] Length = 227 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 87/194 (44%), Positives = 115/194 (59%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F G +I LP G PE+AF+GRSNVGKSS+IN L R+ LAR S+ PGRT+ LNFF Sbjct: 27 FFFGSQKIDQLPPVGRPEVAFAGRSNVGKSSIINALTGRRALARASSEPGRTKQLNFFNL 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D ++LVDMPGYG+A+A K + W ++ YL R+TL V LL+D R Sbjct: 87 ADR---------LSLVDMPGYGFAKAAKSVKEDWQDMMFAYLRGRTTLERVILLLDARIE 137 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+DV LD+ AV +QIVLTK D++ P + + + L + A+P +I TSS Sbjct: 138 LKASDKDVMELLDRAAVVFQIVLTKCDQVKPKALAAKIAEVEALALKHAAAYPRIIATSS 197 Query: 194 VKRKGIEVLRKAIL 207 GIE LR I Sbjct: 198 ETGFGIEDLRAEIA 211 >gi|300725096|ref|YP_003714424.1| putative GTPase [Xenorhabdus nematophila ATCC 19061] gi|297631641|emb|CBJ92354.1| putative GTPase with nucleoside triP hydrolase domain, involved in coordination of cell cycle [Xenorhabdus nematophila ATCC 19061] Length = 200 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 4 FVTSAPDIRHLPQDVGIEVAFAGRSNAGKSSALNALTRQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D + LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 64 ED---------GIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRECLLGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + V ++LTK DKL+ + L K + + +V SS Sbjct: 115 LKDLDMQMIEWAVVMQVPVMVLLTKADKLASGARKSQLAKVREELAKL-DGDVQVEYFSS 173 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ GI+ L + + N Sbjct: 174 LKKLGIDKLEQKLDLWFN 191 >gi|313890490|ref|ZP_07824118.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pseudoporcinus SPIN 20026] gi|313121007|gb|EFR44118.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pseudoporcinus SPIN 20026] Length = 199 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 98/210 (46%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PE+A +GRSNVGKSS IN ++ RKNLARTS Sbjct: 1 MAEENLLNTHNAALLLSAANKSHYPQDDIPEVALAGRSNVGKSSFINTILGRKNLARTSA 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL R Sbjct: 61 KPGKTQLLNFFNIDD---------KIRFVDVPGYGYAKVSKTERARWGKMIEEYLVNREN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH D ++ FL + +V TK DK+ + K + Sbjct: 112 LRVVVSLVDLRHEPSGEDVQMYEFLKYYEIPVIVVATKADKIPRGKWNKHEAMVKKKLN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + I SSV R GI+ +IL I Sbjct: 171 -FDSSDQFIIFSSVNRLGIDQAWDSILAMI 199 >gi|56808898|ref|ZP_00366607.1| COG0218: Predicted GTPase [Streptococcus pyogenes M49 591] gi|94988379|ref|YP_596480.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS9429] gi|94990259|ref|YP_598359.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS10270] gi|94992261|ref|YP_600360.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS2096] gi|209559239|ref|YP_002285711.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes NZ131] gi|119369269|sp|Q1JC92|ENGB_STRPB RecName: Full=Probable GTP-binding protein EngB gi|119369270|sp|Q1JM76|ENGB_STRPC RecName: Full=Probable GTP-binding protein EngB gi|119369271|sp|Q1JHC1|ENGB_STRPD RecName: Full=Probable GTP-binding protein EngB gi|238058988|sp|B5XL04|ENGB_STRPZ RecName: Full=Probable GTP-binding protein EngB gi|94541887|gb|ABF31936.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS9429] gi|94543767|gb|ABF33815.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS10270] gi|94545769|gb|ABF35816.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS2096] gi|209540440|gb|ACI61016.1| GTP-binding protein EngB [Streptococcus pyogenes NZ131] Length = 199 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 101/210 (48%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ Sbjct: 1 MAEEQVLNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNIDD---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTTRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH + D ++ FL + +V TK DK+ + K + Sbjct: 112 LRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVATKADKIPRGKWNKHESVVKKALN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I SSV+R GI+ AILE + Sbjct: 171 -FDKSDTFIVFSSVERIGIDDSWDAILEQV 199 >gi|324991226|gb|EGC23160.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK353] gi|328946143|gb|EGG40288.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1087] Length = 195 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYNIPVILVATKADKIPRGKWNKHESAIKKKLD--FDKNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 TKDGLDAAWDAILSKI 195 >gi|304399054|ref|ZP_07380923.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. aB] gi|304353514|gb|EFM17892.1| ribosome biogenesis GTP-binding protein YsxC [Pantoea sp. aB] Length = 211 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K+ LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 KEGK---------RLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVILMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+ + ++ + + ++LTK DKL+ + L + + +V SS Sbjct: 122 LKDLDRQMINWSVESGIPVLLLLTKADKLASGARKAQLNVVREAALEF-VGDVQVELFSS 180 Query: 194 VKRKGIEVLRKAILET 209 +K+ G++ +R+ + Sbjct: 181 LKKIGVDKVRQKLDSW 196 >gi|319947000|ref|ZP_08021234.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus australis ATCC 700641] gi|319747048|gb|EFV99307.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus australis ATCC 700641] Length = 198 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 98/195 (50%), Gaps = 11/195 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L G P+ PE+A +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSATNKGHYPQDDIPEVALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------QLRFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLRAVVSLVDLRHEP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVILVATKADKIPRGKWNKHESMIKKKLD--FDKTDTFIIFSSV 179 Query: 195 KRKGIEVLRKAILET 209 + G+E AI + Sbjct: 180 NKTGVEEAWDAIFDY 194 >gi|298207894|ref|YP_003716073.1| GTP-binding protein [Croceibacter atlanticus HTCC2559] gi|83850535|gb|EAP88403.1| GTP-binding protein [Croceibacter atlanticus HTCC2559] Length = 202 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 106/202 (52%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ ++ P+ PE AF GRSNVGKSSLIN++ N K LA+TS+ PG+TQ +N Sbjct: 4 NTAKFVISNSDVDKCPQDKLPEYAFIGRSNVGKSSLINMMTNNKKLAKTSSTPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ D LVD+PGYGYAR KK + I Y +RS L C ++L+D Sbjct: 64 HFIIND---------EWYLVDLPGYGYARTSKKTKKVFQKFITDYFVKRSQLVCAFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID + +L ++ + I+ TK DKL + + PE Sbjct: 115 SRHAPQKIDLEFMEWLGTNSIPFAIIFTKTDKLKKGEWDRNFKVYSSKMMETWAEMPEYF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS+ + G E + + I +TIN Sbjct: 175 TTSSLHKTGAEEVLEYI-DTIN 195 >gi|254976899|ref|ZP_05273371.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-66c26] gi|255094286|ref|ZP_05323764.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile CIP 107932] gi|255102467|ref|ZP_05331444.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-63q42] gi|255308372|ref|ZP_05352543.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile ATCC 43255] gi|255316039|ref|ZP_05357622.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-76w55] gi|255518696|ref|ZP_05386372.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-97b34] gi|255651818|ref|ZP_05398720.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-37x79] gi|255657258|ref|ZP_05402667.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-23m63] gi|306521606|ref|ZP_07407953.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile QCD-32g58] gi|119369184|sp|Q180E5|ENGB_CLOD6 RecName: Full=Probable GTP-binding protein EngB Length = 203 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 109/196 (55%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P G PEIA +GRSNVGKSS+IN L+NR+N ARTS PG+T+ +NF++ + Sbjct: 10 MSAVNKSQYPAEGIPEIALAGRSNVGKSSIINTLLNRRNFARTSQTPGKTRTINFYLINN 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 VD+PGYGYA+ K + WGG++ RYL R L ++LL+D RH Sbjct: 70 ---------EFYFVDLPGYGYAKIAKSEKEKWGGIMERYLESRQELCSIFLLVDIRHEPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D+ ++ ++ + ++ TK DK+S Q+ + + ++ + +VIP SS+K Sbjct: 121 ADDKLMYEWIKHFGYNCVVIATKADKISRGQYQKHISIIRKKLQM--ESSEKVIPVSSLK 178 Query: 196 RKGIEVLRKAILETIN 211 + G+E L + I+ N Sbjct: 179 KTGVEELWEEIVNQYN 194 >gi|228478240|ref|ZP_04062848.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus salivarius SK126] gi|312863700|ref|ZP_07723938.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus vestibularis F0396] gi|228249919|gb|EEK09189.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus salivarius SK126] gi|311101236|gb|EFQ59441.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus vestibularis F0396] Length = 199 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 97/210 (46%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PE+A +GRSNVGKSS IN L+ RKNLARTS Sbjct: 1 MAEEQVLNTHNAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSG 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNF+ D + VD+PGYGYAR KK WG +I YL R Sbjct: 61 KPGKTQLLNFYNIDD---------KLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH Q D ++ FL + +V TK DK+ + K + Sbjct: 112 LRVVVSLVDLRHEPTQDDIQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESIIKKKLN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + I SSV R G + IL + Sbjct: 171 -FDKNDHFIVFSSVTRDGYDEAWDTILAEL 199 >gi|320660847|gb|EFX28293.1| GTP-binding protein YsxC [Escherichia coli O55:H7 str. USDA 5905] Length = 198 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 10/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 1 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K Sbjct: 61 GK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLK 111 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +DQ + + ++ ++LTK DKL+ + L + + + +V SS+K Sbjct: 112 DLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLK 170 Query: 196 RKGIEVLRKAILETIN 211 ++G++ LR+ + N Sbjct: 171 KQGVDKLRQKLDTWFN 186 >gi|19745954|ref|NP_607090.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS8232] gi|24418369|sp|Q8P1C8|ENGB_STRP8 RecName: Full=Probable GTP-binding protein EngB gi|19748113|gb|AAL97589.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes MGAS8232] Length = 199 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 101/210 (48%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ Sbjct: 1 MAEEQVLNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNIDD---------KLRFVDVPGYGYAKVSKSERAEWGKMIEEYLTSRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH + D ++ FL + +V TK DK+ + K + Sbjct: 112 LRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVATKADKIPRGKWNKHESVVKKALN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I SSV+R GI+ AILE + Sbjct: 171 -FDKSDTFIVFSSVERIGIDDSWDAILEQV 199 >gi|301309826|ref|ZP_07215765.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 20_3] gi|300831400|gb|EFK62031.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 20_3] Length = 200 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 112/202 (55%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ ++ P+ PE AF GRSNVGKSSLIN+L N+K LA TS PG+T +N Sbjct: 4 KSAEFVISNTDVRKCPEGNKPEYAFIGRSNVGKSSLINMLTNKKGLAMTSQTPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ D LVD+PGYG+A+ K+N + +I Y+ +R L +++L+D Sbjct: 64 HFLIND---------EWYLVDLPGYGFAQRGKENREQLKRIIENYILDREQLTNLFVLLD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 CRH ++ID + +L + V + I+ TKIDK+S +E L+ + P + Sbjct: 115 CRHEAQKIDLEFMEWLGESGVPFSIIFTKIDKISKGRLKENLKVYTDKLLETWEELPPIF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 +SS K++G + + I E+IN Sbjct: 175 LSSSEKKEGRDEILDYI-ESIN 195 >gi|210621785|ref|ZP_03292814.1| hypothetical protein CLOHIR_00759 [Clostridium hiranonis DSM 13275] gi|210154549|gb|EEA85555.1| hypothetical protein CLOHIR_00759 [Clostridium hiranonis DSM 13275] Length = 203 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 103/193 (53%), Gaps = 11/193 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P G PEIA +GRSNVGKSSL N L+NR+N ARTS+ PG+T+ +NF++ Sbjct: 10 MSAVHRHQYPTDGIPEIALAGRSNVGKSSLTNALLNRRNFARTSSTPGKTRTINFYLIN- 68 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 VD+PGYGYA+ K D WG ++ RYL +R L ++LL+D RH Sbjct: 69 --------KEFFFVDLPGYGYAKVAKSEKDKWGQVMERYLQDRDELCAIFLLVDIRHEPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D+ ++ ++ +V TK DK+S + L + ++ ++IP SS K Sbjct: 121 ADDKMMYDWIKYYGYDCVVVATKADKISRGQYLKHLSVIRKKLQ--LEKDEKIIPVSSSK 178 Query: 196 RKGIEVLRKAILE 208 + GIE L I+E Sbjct: 179 KTGIEELWSEIVE 191 >gi|261866835|ref|YP_003254757.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412167|gb|ACX81538.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D11S-1] Length = 204 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S+ FL P + LP+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSYIKLNYHKTHFLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGIVILMDIRHPLKDLDQQMIEWAVASQLPVLLLLTKADKLSQSERSKQMKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S++KR GI+ L + Sbjct: 172 R-GDIQVEAFSALKRTGIDRLAATL 195 >gi|307256115|ref|ZP_07537902.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865296|gb|EFM97192.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 206 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N Sbjct: 7 HKTHFLTSAPDIRHLPEDNGVEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F P LVD+PGYGYA P++ W + YL +R L V +L+D Sbjct: 67 LFEV---------EPNCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRECLHGVVILMD 117 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + ++LTK DKLS + +T++ + I + +V Sbjct: 118 IRHPLKDLDQQMIEWAVSAQLPVLLLLTKADKLSQSARSKTVKMVREAILPFQ-GDIQVE 176 Query: 190 PTSSVKRKGIEVL 202 S++ + GI+ L Sbjct: 177 AYSALNKVGIDKL 189 >gi|15674911|ref|NP_269085.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes M1 GAS] gi|71910505|ref|YP_282055.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS5005] gi|306827517|ref|ZP_07460800.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes ATCC 10782] gi|24418393|sp|Q9A088|ENGB_STRP1 RecName: Full=Probable GTP-binding protein EngB gi|13622052|gb|AAK33806.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes M1 GAS] gi|71853287|gb|AAZ51310.1| GTP-binding protein [Streptococcus pyogenes MGAS5005] gi|304430315|gb|EFM33341.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes ATCC 10782] Length = 199 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 101/210 (48%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ Sbjct: 1 MAEEQVLNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNIDD---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH + D ++ FL + +V TK DK+ + K + Sbjct: 112 LRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVATKADKIPRGKWNKHESVVKKALN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I SSV+R GI+ AILE + Sbjct: 171 -FDKSDTFIVFSSVERIGIDDSWDAILEQV 199 >gi|16079871|ref|NP_390697.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis subsp. subtilis str. 168] gi|221310759|ref|ZP_03592606.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. 168] gi|221315084|ref|ZP_03596889.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320003|ref|ZP_03601297.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. JH642] gi|221324285|ref|ZP_03605579.1| GTPase EngB [Bacillus subtilis subsp. subtilis str. SMY] gi|321312351|ref|YP_004204638.1| GTP-binding protein YsxC [Bacillus subtilis BSn5] gi|586754|sp|P38424|ENGB_BACSU RecName: Full=Probable GTP-binding protein EngB gi|49259156|pdb|1SUL|A Chain A, Crystal Structure Of The Apo-Ysxc gi|49259157|pdb|1SUL|B Chain B, Crystal Structure Of The Apo-Ysxc gi|49259162|pdb|1SVI|A Chain A, Crystal Structure Of The Gtp-Binding Protein Ysxc Complexed With Gdp gi|49259165|pdb|1SVW|A Chain A, Crystal Structure Of Ysxc Complexed With Gmppnp gi|49259166|pdb|1SVW|B Chain B, Crystal Structure Of Ysxc Complexed With Gmppnp gi|496558|emb|CAA53985.1| unnamed protein product [Bacillus subtilis subsp. subtilis str. 168] gi|1770079|emb|CAA99541.1| hypothetical protein [Bacillus subtilis] gi|2635284|emb|CAB14779.1| GTPase involved in ribosome 50S subunit assembly [Bacillus subtilis subsp. subtilis str. 168] gi|291485234|dbj|BAI86309.1| GTPase EngB [Bacillus subtilis subsp. natto BEST195] gi|320018625|gb|ADV93611.1| GTP-binding protein YsxC [Bacillus subtilis BSn5] Length = 195 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 11/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYG+A+ K ++WG +I Y++ R L+ V ++D RH Sbjct: 69 D---------ELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + ++ TK DK+ + + + + P E+I SS Sbjct: 120 SNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPE--DELILFSSE 177 Query: 195 KRKGIEVLRKAILETIN 211 +KG + AI + IN Sbjct: 178 TKKGKDEAWGAIKKMIN 194 >gi|83859292|ref|ZP_00952813.1| GTP-binding protein [Oceanicaulis alexandrii HTCC2633] gi|83852739|gb|EAP90592.1| GTP-binding protein [Oceanicaulis alexandrii HTCC2633] Length = 192 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 93/192 (48%), Positives = 117/192 (60%), Gaps = 9/192 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + GV + LP PE+AF+GRSNVGKSSLIN L RK LAR S PGRT+ LNFF Sbjct: 1 MLGVVSMDTLPDTHVPEVAFAGRSNVGKSSLINALTGRKQLARASTEPGRTRELNFFDMH 60 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + +VD+PGYG+A+APK+ W L YL R L+ V+LLID RHG+ Sbjct: 61 ---------GRLRIVDLPGYGFAKAPKEVAARWTRLTQNYLRGRVNLKRVFLLIDSRHGI 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K D+ + LD AV YQIVLTK DKL P+ AQ+ LE+T+ + P A P + TSS Sbjct: 112 KPSDEAIMKVLDSAAVVYQIVLTKTDKLKPSEAQKRLEETQAKVARRPAAFPVISATSSA 171 Query: 195 KRKGIEVLRKAI 206 KR G++ LR I Sbjct: 172 KRDGLDELRGEI 183 >gi|163795446|ref|ZP_02189413.1| acetylglutamate kinase [alpha proteobacterium BAL199] gi|159179432|gb|EDP63963.1| acetylglutamate kinase [alpha proteobacterium BAL199] Length = 214 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 89/206 (43%), Positives = 112/206 (54%), Gaps = 10/206 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F + F LP G PE+AF+GRSNVGKSSL+N L RK+LARTSN Sbjct: 15 AARVLFAQ-ECTFKWAAATTQQLPPLGLPEVAFAGRSNVGKSSLVNALTGRKSLARTSNT 73 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ L FF + LVD+PGYGYA+ K V W + YL R++L Sbjct: 74 PGRTQELIFFDLGSR---------LQLVDLPGYGYAKVSKTKVQLWTDTLFAYLRGRTSL 124 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V LLID RHG K ID + D+ A+SYQI+LTK DK P+ E +E + Sbjct: 125 HRVNLLIDSRHGPKDIDNEAMDLFDRAALSYQIILTKADKPKPSELAELIESLGAALAKR 184 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAIL 207 P AHP++ TSS GI LR + Sbjct: 185 PAAHPQIRATSSFSGDGIAELRAELA 210 >gi|154492901|ref|ZP_02032527.1| hypothetical protein PARMER_02540 [Parabacteroides merdae ATCC 43184] gi|154087206|gb|EDN86251.1| hypothetical protein PARMER_02540 [Parabacteroides merdae ATCC 43184] Length = 198 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + P PE AF GRSNVGKSSLIN+L +K LA TS PG+T +N Sbjct: 4 KSAEFVISNTNVKKCPTGDLPEYAFIGRSNVGKSSLINMLTGKKGLAMTSQKPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYG+A+ K+ ++ +I Y+ ER L +++LID Sbjct: 64 HFLIN---------GQWYLVDLPGYGFAQRGKEGRENIQRIIEDYILEREQLTNLFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 CRH ++ID + +L + + + ++ TKIDK+S QE L+ + + P ++ Sbjct: 115 CRHEPQKIDLEFMEWLGENEIPFSLIFTKIDKISKGRLQENLKVYQTKLLESWEELPPIL 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 +SS K++G + + I E Sbjct: 175 LSSSEKKEGRDKILNYIDE 193 >gi|86747808|ref|YP_484304.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris HaA2] gi|119369244|sp|Q2J2B7|ENGB_RHOP2 RecName: Full=Probable GTP-binding protein EngB gi|86570836|gb|ABD05393.1| GTP-binding [Rhodopseudomonas palustris HaA2] Length = 216 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 95/202 (47%), Positives = 121/202 (59%), Gaps = 7/202 (3%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 W F+ P I LP E+AF+GRSNVGKSSLIN L R LARTS+ PGRTQ L Sbjct: 19 GDWHFIWASPSIETLPPMDGLEVAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQELI 78 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + LVDMPGYGYA A K V SW LI ++L R+TL VY+LID Sbjct: 79 FFDGP-------PGAGLRLVDMPGYGYAAASKAKVASWTSLIHKFLQGRATLARVYVLID 131 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG+K +D D+ LDK AVSYQIVLTK D++ E ++ T+ + +P A PE++ Sbjct: 132 GRHGLKDVDLDILKTLDKAAVSYQIVLTKADQVKAAELAERVDATRTALAKHPAAFPELL 191 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS G+ LR A++ ++ Sbjct: 192 TTSSRTGAGMPELRAAMIRLLD 213 >gi|195978195|ref|YP_002123439.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974900|gb|ACG62426.1| probable GTP-binding protein EngB [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 200 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 104/210 (49%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M I L P+ PEIA +GRSNVGKSS IN ++ RK+LARTS+ Sbjct: 2 MSEEQILNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSS 61 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + LVD+PGYGYA+ K WG +I YL+ R Sbjct: 62 KPGKTQLLNFFNVDD---------KLRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQN 112 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH Q D ++ FL + IV TK DK+ + K + N Sbjct: 113 LRAVVSLVDFRHEPSQDDIQMYEFLKYYEIPVIIVATKADKVLRGRWNKHESMVKKSL-N 171 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + +I SSV+R GI+ ILE + Sbjct: 172 FDRTDAFII-FSSVERIGIDESWDTILEYL 200 >gi|71903337|ref|YP_280140.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS6180] gi|119369273|sp|Q48U21|ENGB_STRPM RecName: Full=Probable GTP-binding protein EngB gi|71802432|gb|AAX71785.1| GTP-binding protein [Streptococcus pyogenes MGAS6180] Length = 199 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 101/210 (48%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L PK PEIA +GRSNVGKSS IN ++ RKNLARTS+ Sbjct: 1 MAEEQVLNTHNASILLSAANKSHYPKDDLPEIALAGRSNVGKSSFINTILGRKNLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNIDD---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH + D ++ FL + +V TK DK+ + K + Sbjct: 112 LRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVATKADKIPRGKWNKHESVVKKALN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I SSV+R GI+ AILE + Sbjct: 171 -FDNSDTFIVFSSVERIGIDDSWDAILEQV 199 >gi|325687396|gb|EGD29417.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK72] Length = 195 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYDIPVVLVATKADKIPRGKWNKHESAIKKKLD--FDKNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 TKDGLDAAWDAILSKI 195 >gi|296331634|ref|ZP_06874103.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675407|ref|YP_003867079.1| putative ribosome biogenesis GTP-binding protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296151229|gb|EFG92109.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413651|gb|ADM38770.1| putative ribosome biogenesis GTP-binding protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 195 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 11/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D A+ VD+PGYG+A+ K ++WG +I Y++ R L+ V ++D RH Sbjct: 69 D---------ALHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + ++ TK DK+ + + + + P E+I SS Sbjct: 120 SNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPE--DELILFSSE 177 Query: 195 KRKGIEVLRKAILETIN 211 +KG + AI + IN Sbjct: 178 TKKGKDEAWGAIKKMIN 194 >gi|284009009|emb|CBA75939.1| probable GTP-binding protein [Arsenophonus nasoniae] Length = 208 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 109/211 (51%), Gaps = 10/211 (4%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M+++ + F+ P+I LP EIAF+GRSN GKSS +N L +KNLARTS Sbjct: 1 MMTNKNYNYHQTKFVTSAPDIHHLPNDHGIEIAFAGRSNAGKSSALNALTQQKNLARTSK 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ +N F + + LVD+PGYGYA P+ W + YL +R Sbjct: 61 TPGRTQLINLFEVAE---------GIRLVDLPGYGYAEVPESVKRQWQQALSEYLQKRKC 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ + +L+D RH +K +D + + + I+LTK DKL P + L ++ Sbjct: 112 LKGLIILMDIRHPLKDMDIQMIEWSVAMNIPILILLTKADKLVPNKRKTQLIAVHNKLK- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + +V SS+K+ GI+ L+ + E N Sbjct: 171 TVAGNIQVETFSSLKKMGIDKLQLKLDEWFN 201 >gi|322372511|ref|ZP_08047047.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. C150] gi|321277553|gb|EFX54622.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sp. C150] Length = 199 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 97/210 (46%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PE+A +GRSNVGKSS IN L+ RKNLARTS Sbjct: 1 MAEEQVLNTHNAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSG 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNF+ D + VD+PGYGYAR KK WG +I YL R Sbjct: 61 KPGKTQLLNFYNIDD---------KLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH Q D ++ FL + +V TK DK+ + K + Sbjct: 112 LRVVVSLVDLRHEPTQDDIQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESVIKKKLN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + I SSV R G + IL + Sbjct: 171 -FDKNDHFIVFSSVTRDGYDEAWDTILSEL 199 >gi|332360756|gb|EGJ38564.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK355] Length = 195 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 79/196 (40%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KMRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKKKLD--FDKNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 TKDGLDAAWDAILSKI 195 >gi|258516483|ref|YP_003192705.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771] gi|257780188|gb|ACV64082.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771] Length = 201 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 106/201 (52%), Gaps = 13/201 (6%) Query: 11 AWIFLRGVPEIGLLPKAG-PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ P I L P+ PEI F+GRSNVGKSSLIN LVNRKNLARTS PGRTQ LN Sbjct: 5 SAEFVISSPGIKLCPEGQEYPEIGFAGRSNVGKSSLINKLVNRKNLARTSKTPGRTQLLN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F+ A +VD PGYGYA+ P+ WG +I YL R L V LL+D Sbjct: 65 YFLIN---------RAFYIVDFPGYGYAKVPQSVRAGWGKMIEGYLKNRKELSGVVLLLD 115 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D +F +L + +V TK DKLS + + + + + +++ Sbjct: 116 IRHKPTAQDVQMFDWLQHYEIPTLLVATKADKLSRSQQIKQEKVIRTALGR---EQEKIL 172 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS+ +G + L + E + Sbjct: 173 LFSSLTGQGKDELLSLLEEIV 193 >gi|308174517|ref|YP_003921222.1| GTPase [Bacillus amyloliquefaciens DSM 7] gi|307607381|emb|CBI43752.1| GTPase involved in ribosome 50S subunit assembly [Bacillus amyloliquefaciens DSM 7] gi|328554436|gb|AEB24928.1| GTP-binding protein YsxC [Bacillus amyloliquefaciens TA208] gi|328912840|gb|AEB64436.1| GTPase involved in ribosome 50S subunit assembly [Bacillus amyloliquefaciens LL3] Length = 195 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVKPEQYPDGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYG+A+ K ++WG +I Y++ R L+ ++D RH Sbjct: 69 D---------ELHFVDVPGYGFAKVSKSEREAWGRMIETYMTTREELKACVQIVDLRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D +++ FL + ++ TK DK+ + L+ K + P E+I SS Sbjct: 120 SADDVNMYEFLKYYGIPVIVIATKADKIPKGKWDKHLKVVKQTLDMDPE--DELILFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 +KG + AI + I Sbjct: 178 TKKGKDEAWGAIKKMI 193 >gi|225573069|ref|ZP_03781824.1| hypothetical protein RUMHYD_01260 [Blautia hydrogenotrophica DSM 10507] gi|225039575|gb|EEG49821.1| hypothetical protein RUMHYD_01260 [Blautia hydrogenotrophica DSM 10507] Length = 202 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 77/191 (40%), Positives = 114/191 (59%), Gaps = 11/191 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PEIAF+G+SNVGKSSLIN L+NRK+LARTS+ PG+TQ +NF+ D Sbjct: 16 STLPENEWPEIAFAGKSNVGKSSLINALMNRKSLARTSSQPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ + + WG LI RYL LR V+LLID RH + D+ + Sbjct: 70 ---CMYLVDLPGYGYAKVAQSEKEKWGKLIERYLHSSKMLRAVFLLIDIRHEPSKNDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + I+ TK+DKL + Q+ ++ + + P + +VIP S+V ++G E Sbjct: 127 YDWIVAQGYEPIIIATKLDKLKRSQVQKHVKMVRQGLSLLPGS--QVIPFSAVTKQGREE 184 Query: 202 LRKAILETINY 212 + + I + Sbjct: 185 IWDLMDRLIGF 195 >gi|55820661|ref|YP_139103.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus thermophilus LMG 18311] gi|55822552|ref|YP_140993.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus thermophilus CNRZ1066] gi|81820325|sp|Q5M0S3|ENGB_STRT1 RecName: Full=Probable GTP-binding protein EngB gi|81820489|sp|Q5M5A9|ENGB_STRT2 RecName: Full=Probable GTP-binding protein EngB gi|55736646|gb|AAV60288.1| GTP-binding protein [Streptococcus thermophilus LMG 18311] gi|55738537|gb|AAV62178.1| GTP-binding protein [Streptococcus thermophilus CNRZ1066] Length = 199 Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 97/210 (46%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PE+A +GRSNVGKSS IN L+ RKNLARTS Sbjct: 1 MTEEQVLNTHNAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSG 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNF+ D + VD+PGYGYAR KK WG +I YL R Sbjct: 61 KPGKTQLLNFYNIDD---------KLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH Q D ++ FL + +V TK DK+ + K + Sbjct: 112 LRVVVSLVDLRHEPTQDDIQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESIIKKKLN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + I SSV R G + IL + Sbjct: 171 -FDKNDHFIVFSSVTRDGYDEAWDTILAEL 199 >gi|324992982|gb|EGC24902.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK405] gi|324995709|gb|EGC27621.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK678] gi|327462278|gb|EGF08605.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1] gi|327489631|gb|EGF21423.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1058] Length = 195 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKKKLD--FDRNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 TKDGLDAAWDAILSKI 195 >gi|125717924|ref|YP_001035057.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK36] gi|166226980|sp|A3CMV2|ENGB_STRSV RecName: Full=Probable GTP-binding protein EngB gi|125497841|gb|ABN44507.1| GTP-binding protein, putative [Streptococcus sanguinis SK36] gi|327460432|gb|EGF06769.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1057] gi|327470115|gb|EGF15579.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK330] Length = 195 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKKKLD--FDKNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 TKDGLDAAWDAILSKI 195 >gi|52426052|ref|YP_089189.1| GTPase EngB [Mannheimia succiniciproducens MBEL55E] gi|81609396|sp|Q65R06|ENGB_MANSM RecName: Full=Probable GTP-binding protein EngB gi|52308104|gb|AAU38604.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 205 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ I LPK EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N Sbjct: 9 HKTHFMTSAANIHQLPKDEGMEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLIN 68 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F P LVD+PGYGYA P++ W + YL R L+ V +L+D Sbjct: 69 LFEV---------EPQYKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQHRECLKGVVILMD 119 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + ++LTK DKLS + + ++ + I + +V Sbjct: 120 IRHPLKDLDQQMIEWAVSSDLPVLLLLTKADKLSQSARSKQVKTVREAILPFQ-GDVQVE 178 Query: 190 PTSSVKRKGIEVLRKAILET 209 S+ + GI+ L + Sbjct: 179 AFSAQNKIGIDKLAAKLDSW 198 >gi|332361328|gb|EGJ39132.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1056] Length = 195 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKKKLD--FDRNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 TKDGLDAAWDAILSKI 195 >gi|293393656|ref|ZP_06637966.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291423991|gb|EFE97210.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 267 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 64 FVTSAPDIRHLPADAGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 123 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D + LVD+PGYGYA P++ W + YL R+ L+ + +L+D RH Sbjct: 124 ED---------GIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNCLKGLVVLMDIRHP 174 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++LTK DKL+ + + + + + +V P SS Sbjct: 175 LKDLDQQMIQWAVDVGTPVLVLLTKADKLASGARKAQVNMVREAVLAF-MGDIQVEPFSS 233 Query: 194 VKRKGIEVLRKAILETIN 211 K+ G++ L + + N Sbjct: 234 PKKIGVDKLSQKLNTWFN 251 >gi|262392690|ref|YP_003284544.1| GTP-binding protein EngB [Vibrio sp. Ex25] gi|262336284|gb|ACY50079.1| GTP-binding protein EngB [Vibrio sp. Ex25] Length = 219 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 72 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 123 MKDLDQQMIFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETF-GGDVSVDVFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 182 LKGLGVDQLRAKL 194 >gi|119370483|sp|Q7MQ23|ENGB_VIBVY RecName: Full=Probable GTP-binding protein EngB Length = 216 Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 72 TE---------GCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + L K + L + +V SS Sbjct: 123 MKDLDQQMIFWAIESRIPVQVLLTKADKLKSGARKAELLKVRKLAETF-GGDVQVDVYSS 181 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 182 LKGLGVDQLRAKL 194 >gi|332366631|gb|EGJ44374.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK1059] Length = 195 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKKKLD--FDKNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 TKDGLDTAWDAILSKI 195 >gi|281419987|ref|ZP_06250986.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella copri DSM 18205] gi|281405787|gb|EFB36467.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella copri DSM 18205] Length = 201 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F P + + PK E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N Sbjct: 4 KKSEFTISAPRVSMCPKDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A+ K +I Y+ +R L V++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGFAKRSKTVQKQLEQMISSYILQRQQLANVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID++ +L + V + IV TK DKL P A+ EK + + + A P Sbjct: 115 VRHDQQKIDREFVDWLGESGVPFCIVFTKADKLGPVKARMNAEKWMHALEDRWEALPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TSS K+ G + + I E Sbjct: 175 ITSSEKKLGRDEVLDYIDE 193 >gi|154686955|ref|YP_001422116.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus amyloliquefaciens FZB42] gi|166225941|sp|A7Z7A9|ENGB_BACA2 RecName: Full=Probable GTP-binding protein EngB gi|154352806|gb|ABS74885.1| YsxC [Bacillus amyloliquefaciens FZB42] Length = 195 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVKPEQYPDGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYG+A+ K ++WG +I Y++ R L+ ++D RH Sbjct: 69 D---------ELHFVDVPGYGFAKVSKSEREAWGRMIETYMTTREELKACVQIVDLRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D +++ FL + ++ TK DK+ + L+ K + P E+I SS Sbjct: 120 SAEDVNMYEFLKYYGIPVIVIATKADKIPKGKWDKHLKVVKQTLDMDPE--DELILFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 +KG + AI + I Sbjct: 178 TKKGKDEAWGAIKKMI 193 >gi|147677143|ref|YP_001211358.1| ribosome biogenesis GTP-binding protein YsxC [Pelotomaculum thermopropionicum SI] gi|189037182|sp|A5D451|ENGB_PELTS RecName: Full=Probable GTP-binding protein EngB gi|146273240|dbj|BAF58989.1| predicted GTPase [Pelotomaculum thermopropionicum SI] Length = 198 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 11/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P PE+A +GRSNVGKSSL+N LVNRK+LAR S+ PGRT+ +NFF+ Sbjct: 8 FITSAAKTADYPAGNIPEVALAGRSNVGKSSLLNRLVNRKSLARISSTPGRTRLINFFLV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ + W ++ YL R L+ V LL+D RH Sbjct: 68 NGL---------FRLVDLPGYGYAKVSARERQGWRRMVEEYLKTRENLKGVVLLVDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +D ++ +L + + + TK DK+S + ++L+ + ++ TA ++ S+ Sbjct: 119 PTVLDVQMYEWLKYQGIPAAVAATKADKISRSKRAQSLKVIREVLN--LTAKEPLVFFSA 176 Query: 194 VKRKGIEVLRKAILETIN 211 +G E + + I + Sbjct: 177 ETSEGREEMLEVIGRWVG 194 >gi|254228534|ref|ZP_04921959.1| GTPase of unknown function subfamily, putative [Vibrio sp. Ex25] gi|151938916|gb|EDN57749.1| GTPase of unknown function subfamily, putative [Vibrio sp. Ex25] Length = 223 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 127 MKDLDQQMIFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 186 LKGLGVDQLRAKL 198 >gi|296451903|ref|ZP_06893619.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile NAP08] gi|296879704|ref|ZP_06903679.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile NAP07] gi|296259217|gb|EFH06096.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile NAP08] gi|296429293|gb|EFH15165.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium difficile NAP07] Length = 206 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 109/196 (55%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P G PEIA +GRSNVGKSS+IN L+NR+N ARTS PG+T+ +NF++ + Sbjct: 13 MSAVNKSQYPAEGIPEIALAGRSNVGKSSIINTLLNRRNFARTSQTPGKTRTINFYLINN 72 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 VD+PGYGYA+ K + WGG++ RYL R L ++LL+D RH Sbjct: 73 ---------EFYFVDLPGYGYAKIAKSEKEKWGGIMERYLESRQELCSIFLLVDIRHEPT 123 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D+ ++ ++ + ++ TK DK+S Q+ + + ++ + +VIP SS+K Sbjct: 124 ADDKLMYEWIKHFGYNCVVIATKADKISRGQYQKHISIIRKKLQM--ESSEKVIPVSSLK 181 Query: 196 RKGIEVLRKAILETIN 211 + G+E L + I+ N Sbjct: 182 KTGVEELWEEIVNQYN 197 >gi|329888536|ref|ZP_08267134.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas diminuta ATCC 11568] gi|328847092|gb|EGF96654.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas diminuta ATCC 11568] Length = 222 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 98/208 (47%), Positives = 120/208 (57%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F + A F+ G +I LP PEIAF+GRSNVGKSSLIN LV LAR SN Sbjct: 19 AARVLFARQAS-FVLGCAKIEQLPTPDLPEIAFAGRSNVGKSSLINGLVGMHKLARASNE 77 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+ +NFF M LVD+PGYG+A+A K V + L YL R TL Sbjct: 78 PGRTREVNFFDLD---------GRMRLVDLPGYGWAKASKTTVKKFQDLGRDYLRGRVTL 128 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + VYLLID RHG+K++D + LD AVSYQIVLTK DKL A++ T I Sbjct: 129 KRVYLLIDSRHGLKKVDDEALDALDLSAVSYQIVLTKADKLKKGEAEKVQAATLKAISKR 188 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 P A+P V TSS K G+ LR I+ T Sbjct: 189 PAAYPHVAVTSSEKGFGLPELRAEIMRT 216 >gi|291326949|ref|ZP_06126451.2| ribosome biogenesis GTP-binding protein YsxC [Providencia rettgeri DSM 1131] gi|291312279|gb|EFE52732.1| ribosome biogenesis GTP-binding protein YsxC [Providencia rettgeri DSM 1131] Length = 212 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 107/198 (54%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LPK E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 22 FVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLFEV 81 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL +R ++ + +L+D RH Sbjct: 82 EE---------GVRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRECIKGLVVLMDIRHP 132 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + V ++LTK DKL+ ++ L + + + EV S+ Sbjct: 133 LKDLDMQMIEWSVAMNVPVLVLLTKADKLASGARKKQLMEVRQALAPL-EGDIEVEYFSA 191 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ GI+ LR + N Sbjct: 192 LKKIGIDKLRIKLDSWYN 209 >gi|37678371|ref|NP_932980.1| GTPase EngB [Vibrio vulnificus YJ016] gi|37197110|dbj|BAC92951.1| predicted GTPase [Vibrio vulnificus YJ016] Length = 220 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 TE---------GCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + L K + L + +V SS Sbjct: 127 MKDLDQQMIFWAIESRIPVQVLLTKADKLKSGARKAELLKVRKLAETF-GGDVQVDVYSS 185 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 186 LKGLGVDQLRAKL 198 >gi|225011603|ref|ZP_03702041.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-2A] gi|225004106|gb|EEG42078.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-2A] Length = 205 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 104/197 (52%), Gaps = 10/197 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P + PE AF GRSNVGKSSLIN L N+KNLA+TS+ PG+TQ +N Sbjct: 5 SATFVISNSDVAKCPNSHLPEYAFIGRSNVGKSSLINALCNKKNLAKTSSRPGKTQLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PG+GYAR K + + Y ER L +LLID Sbjct: 65 FLINQ---------NWHLVDLPGFGYARVSKTQKKVFQKFVTNYFKERKQLVNAFLLIDI 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVI 189 RH + ID + +L + + + I+ TK DKL P + ++ T+ ++ P + Sbjct: 116 RHDPQPIDMNFMEWLGENQIPFSIIFTKADKLKPAARERNIKAYTEKMLATLWEELPPIF 175 Query: 190 PTSSVKRKGIEVLRKAI 206 TSS+ + G E + + I Sbjct: 176 ITSSLHKTGGEEILEYI 192 >gi|163752987|ref|ZP_02160111.1| GTP-binding protein [Kordia algicida OT-1] gi|161326719|gb|EDP98044.1| GTP-binding protein [Kordia algicida OT-1] Length = 202 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 105/200 (52%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ ++ P+ PE AF GRSNVGKSSLIN+L RK+LA+TS PG+TQ +N Sbjct: 4 KSAEFVMSNSDVAKCPRNKIPEYAFIGRSNVGKSSLINMLTQRKSLAKTSGRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F D LVD+PGYGYAR K + I Y +R+ L C ++L+D Sbjct: 64 HFKIND---------EWFLVDLPGYGYARVSKSAKKVFQKFITEYFRKRTQLVCGFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTAHPEV 188 RH +++D + +L + + + IV TK DKL P+ + + + L+ + P+ Sbjct: 115 IRHEPQKVDLEFMQWLGENQIPFCIVFTKADKLRPSQIDKHVNAYREKLLEDVWEEMPQH 174 Query: 189 IPTSSVKRKGIEVLRKAILE 208 TSS K G E L I + Sbjct: 175 FVTSSSKAIGREELLDFIGQ 194 >gi|157147356|ref|YP_001454675.1| hypothetical protein CKO_03149 [Citrobacter koseri ATCC BAA-895] gi|157084561|gb|ABV14239.1| hypothetical protein CKO_03149 [Citrobacter koseri ATCC BAA-895] Length = 198 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 10/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F + Sbjct: 1 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVE 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K Sbjct: 61 GK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLK 111 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +DQ + + + + ++LTK DKL+ + L + + + +V SS+K Sbjct: 112 DLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLK 170 Query: 196 RKGIEVLRKAILETIN 211 ++G++ LR+ + N Sbjct: 171 KQGVDKLRQKLDSWFN 186 >gi|116627470|ref|YP_820089.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus thermophilus LMD-9] gi|122267932|sp|Q03LM9|ENGB_STRTD RecName: Full=Probable GTP-binding protein EngB gi|116100747|gb|ABJ65893.1| Predicted GTPase [Streptococcus thermophilus LMD-9] gi|312277988|gb|ADQ62645.1| GTPase EngB [Streptococcus thermophilus ND03] Length = 199 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 97/210 (46%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PE+A +GRSNVGKSS IN L+ RKNLARTS Sbjct: 1 MTEEQVLNTHNAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSG 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNF+ D + VD+PGYGYAR KK WG +I YL R Sbjct: 61 KPGKTQLLNFYNIDD---------KLRFVDVPGYGYARVSKKARAKWGKMIEEYLVTRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH Q D ++ FL + +V TK DK+ + K + Sbjct: 112 LRVVVSLVDLRHEPTQDDIQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESIIKKKLN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + I SSV R G + IL + Sbjct: 171 -FDKNDHFIVFSSVTRDGYDEAWDTILAEL 199 >gi|21910141|ref|NP_664409.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS315] gi|28896160|ref|NP_802510.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes SSI-1] gi|25452936|sp|Q8K7V8|ENGB_STRP3 RecName: Full=Probable GTP-binding protein EngB gi|21904334|gb|AAM79212.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315] gi|28811410|dbj|BAC64343.1| conserved hypothetical GTP-binding protein [Streptococcus pyogenes SSI-1] Length = 199 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 101/210 (48%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ Sbjct: 1 MAEEQVLNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNIDD---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH + D ++ FL + +V TK DK+ + K + Sbjct: 112 LRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVATKADKIPHGKWNKHESVVKKALN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I SSV+R GI+ AILE + Sbjct: 171 -FDKSDTFIVFSSVERIGIDDSWDAILEQV 199 >gi|312866664|ref|ZP_07726878.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis F0405] gi|311097745|gb|EFQ55975.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis F0405] Length = 200 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 81/198 (40%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PE+A +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + LVD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH Sbjct: 71 D---------KLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + P I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVILVATKADKIPRGKWNKHESIIKKKLDFDPA--DTFIVFSSV 179 Query: 195 KRKGIEVLRKAILETINY 212 R+G+E +AILE Y Sbjct: 180 TREGLEKSWEAILENAFY 197 >gi|148976537|ref|ZP_01813233.1| GTPase EngB [Vibrionales bacterium SWAT-3] gi|145964113|gb|EDK29370.1| GTPase EngB [Vibrionales bacterium SWAT-3] Length = 223 Score = 233 bits (596), Expect = 8e-60, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 76 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRESLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + L K + ++ V SS Sbjct: 127 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKQGARKAQLLKIRKDAESF-GGDVAVDVFSS 185 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR + E Sbjct: 186 LKGIGVDQLRNKMDEW 201 >gi|269964580|ref|ZP_06178819.1| GTP-binding protein [Vibrio alginolyticus 40B] gi|269830707|gb|EEZ84927.1| GTP-binding protein [Vibrio alginolyticus 40B] Length = 223 Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 127 MKDLDQQMIFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 186 LKGLGVDQLRAKL 198 >gi|91224945|ref|ZP_01260204.1| GTP-binding protein [Vibrio alginolyticus 12G01] gi|91190191|gb|EAS76461.1| GTP-binding protein [Vibrio alginolyticus 12G01] Length = 223 Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 127 MKDLDQQMIFWAIDSHIPVQVLLTKADKLKSGARKQTLLKVRKQVETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 186 LKGLGVDQLRAKL 198 >gi|120437113|ref|YP_862799.1| ribosome biogenesis GTP-binding protein YsxC [Gramella forsetii KT0803] gi|166225957|sp|A0M537|ENGB_GRAFK RecName: Full=Probable GTP-binding protein EngB gi|117579263|emb|CAL67732.1| protein containing GTP binding domain [Gramella forsetii KT0803] Length = 198 Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P + PE AF GRSNVGKSSLIN+L RK+LA+TS PG+TQ +N F+ Sbjct: 8 FVISNSKVDHCPNSTLPEYAFIGRSNVGKSSLINMLTGRKSLAKTSAKPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K + I Y +R + C ++LID RH Sbjct: 68 NN---------NWHLVDLPGYGYAQVSKSTKKVFQKFITAYFKKREQMICAFVLIDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ID + +L + + + I+ TK DKL P + +E K + PE TS+ Sbjct: 119 PQPIDMEFMQWLGEHNIPFCIIFTKADKLKPKILDKNIENYKNEMLESWVEMPEYFITSA 178 Query: 194 VKRKGIEVLRKAILETIN 211 + G + + I E IN Sbjct: 179 TSKLGQDDILDYI-EGIN 195 >gi|320157740|ref|YP_004190119.1| GTP-binding protein EngB [Vibrio vulnificus MO6-24/O] gi|119370482|sp|Q8DDQ8|ENGB_VIBVU RecName: Full=Probable GTP-binding protein EngB gi|319933052|gb|ADV87916.1| GTP-binding protein EngB [Vibrio vulnificus MO6-24/O] Length = 216 Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 72 TE---------GCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + L K + L + +V SS Sbjct: 123 MKDLDQQMIFWAIESRIPVQVLLTKADKLKSGARKAELLKVRKLAETF-GGDVQVDVYSS 181 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 182 LKGLGVDQLRAKL 194 >gi|225870477|ref|YP_002746424.1| GTP-binding protein [Streptococcus equi subsp. equi 4047] gi|254783210|sp|C0MA50|ENGB_STRE4 RecName: Full=Probable GTP-binding protein EngB gi|225699881|emb|CAW93776.1| putative GTP-binding protein [Streptococcus equi subsp. equi 4047] Length = 199 Score = 233 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 104/210 (49%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M I L P+ PEIA +GRSNVGKSS IN ++ RK+LARTS+ Sbjct: 1 MSEEQILNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKSLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + LVD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFFNVDD---------KLRLVDVPGYGYAKVSKAERARWGKMIEEYLTTRQN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH Q D ++ FL + IV TK DK+ + K + N Sbjct: 112 LRAVVSLVDFRHESSQDDIQMYEFLKYYEIPVIIVATKADKVPRGRWNKHESMVKKSL-N 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + +I SSV+R GI+ ILE + Sbjct: 171 FDQTDAFII-FSSVERIGIDESWDTILEYL 199 >gi|27364347|ref|NP_759875.1| GTP-binding protein YsxC [Vibrio vulnificus CMCP6] gi|27360466|gb|AAO09402.1| GTP-binding protein EngB [Vibrio vulnificus CMCP6] Length = 220 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPADEGIEIAFAGRSNAGKSSALNRLTNQKNLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 TE---------GCHIVDLPGYGFAQVPLEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + L K + L + +V SS Sbjct: 127 MKDLDQQMIFWAIESRIPVQVLLTKADKLKSGARKAELLKVRKLAETF-GGDVQVDVYSS 185 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 186 LKGLGVDQLRAKL 198 >gi|89891777|ref|ZP_01203279.1| GTP-binding cell division protein EngB [Flavobacteria bacterium BBFL7] gi|89515932|gb|EAS18597.1| GTP-binding cell division protein EngB [Flavobacteria bacterium BBFL7] Length = 200 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 101/196 (51%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P + E AF GRSNVGKSSLIN+L N+K+LA+TS PG+TQ +N F+ Sbjct: 8 FVISNQDVKRCPDSKLAEYAFIGRSNVGKSSLINMLTNKKSLAKTSGRPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYAR K + + I Y +R L C ++L+D RH Sbjct: 68 N---------KSWHLVDLPGYGYARVSKSSKAKFQKFITNYFQQRRQLVCAFVLVDVRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY-LIRNYPTAHPEVIPTS 192 + ID + +L + + + IV TK DKL P + +E K L+ P TS Sbjct: 119 PQPIDTEFMEWLGENGIPFGIVFTKADKLKPNALERNVEVYKKQLLDGVWEEVPPYFITS 178 Query: 193 SVKRKGIEVLRKAILE 208 S G E L I E Sbjct: 179 SSNGTGQEELLNYIGE 194 >gi|332360698|gb|EGJ38507.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK49] Length = 195 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYDIPVVLVATKADKIPRGKWNKHESAIKKKLD--FDKNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AI I Sbjct: 180 TKDGLDAAWDAIFSKI 195 >gi|153830625|ref|ZP_01983292.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148873897|gb|EDL72032.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 220 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AD---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|288927638|ref|ZP_06421485.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 317 str. F0108] gi|288330472|gb|EFC69056.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 317 str. F0108] Length = 201 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 102/195 (52%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P I L P E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTLSAPSIRLCPTDNKIEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+A+ K +I Y+ +R L +++LID RH Sbjct: 68 ND---------SWYLVDLPGYGFAKRSKTVQQKLQQMISSYILQREQLVNLFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + V + IV TK DKL A++ EK + + P TSS Sbjct: 119 QQKIDREFIDWLGESGVPFTIVFTKADKLGLVKAKQNAEKWMKQLEDSWEELPPYFITSS 178 Query: 194 VKRKGIEVLRKAILE 208 KR G E L I E Sbjct: 179 EKRIGREELLNYIDE 193 >gi|331644593|ref|ZP_08345712.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H736] gi|331655546|ref|ZP_08356538.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli M718] gi|331665512|ref|ZP_08366410.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA143] gi|331670706|ref|ZP_08371542.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA271] gi|331679971|ref|ZP_08380633.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H591] gi|26111058|gb|AAN83241.1|AE016770_41 Probable GTP-binding protein engB [Escherichia coli CFT073] gi|147313|gb|AAA24403.1| unidentified protein [Escherichia coli] gi|304970|gb|AAB02999.1| matches PS00017: ATP_GTP_A [Escherichia coli str. K-12 substr. MG1655] gi|73857847|gb|AAZ90554.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|81243109|gb|ABB63819.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gi|91074985|gb|ABE09866.1| probable GTP-binding cell division protein [Escherichia coli UTI89] gi|331036055|gb|EGI08291.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H736] gi|331046647|gb|EGI18732.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli M718] gi|331057197|gb|EGI29187.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA143] gi|331061961|gb|EGI33884.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli TA271] gi|331072297|gb|EGI43630.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli H591] Length = 199 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 107/192 (55%), Gaps = 10/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 1 MMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVA 60 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH + Sbjct: 61 DGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K +DQ + + ++ ++LTK DKL+ + L + + + +V SS+ Sbjct: 112 KDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSL 170 Query: 195 KRKGIEVLRKAI 206 K++G++ LR+ + Sbjct: 171 KKQGVDKLRQKL 182 >gi|254419207|ref|ZP_05032931.1| GTPase, putative [Brevundimonas sp. BAL3] gi|196185384|gb|EDX80360.1| GTPase, putative [Brevundimonas sp. BAL3] Length = 217 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 98/208 (47%), Positives = 118/208 (56%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F + A F+ G +I LP PEIAF+GRSNVGKSSLIN LV LAR SN Sbjct: 14 AARILFARPA-TFIMGAAKIEQLPDPDLPEIAFAGRSNVGKSSLINGLVGMHKLARASNE 72 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+ +NFF M LVD+PGYG+A+A K V + L YL R TL Sbjct: 73 PGRTREVNFFDLD---------GRMRLVDLPGYGWAKASKTTVRKFQDLGRDYLRGRVTL 123 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + VYLLID RHG+K +D++ LD AVSYQIVLTK DKL + E T I Sbjct: 124 KRVYLLIDSRHGLKSVDKEALDALDLAAVSYQIVLTKADKLKKGEGEAVQEATLKAISKR 183 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 P A P V TSS K G+ LR I+ T Sbjct: 184 PAAFPVVALTSSEKGLGLPELRAEIMRT 211 >gi|22127680|ref|NP_671103.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis KIM 10] gi|45439885|ref|NP_991424.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis biovar Microtus str. 91001] gi|51594377|ref|YP_068568.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pseudotuberculosis IP 32953] gi|108809514|ref|YP_653430.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis Antiqua] gi|108810412|ref|YP_646179.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis Nepal516] gi|145601125|ref|YP_001165201.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis Pestoides F] gi|150260917|ref|ZP_01917645.1| GTP-binding protein [Yersinia pestis CA88-4125] gi|153948718|ref|YP_001399023.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pseudotuberculosis IP 31758] gi|165926064|ref|ZP_02221896.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. F1991016] gi|165940208|ref|ZP_02228738.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. IP275] gi|166011511|ref|ZP_02232409.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. E1979001] gi|166213756|ref|ZP_02239791.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. B42003004] gi|167402124|ref|ZP_02307601.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418997|ref|ZP_02310750.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167427046|ref|ZP_02318799.1| putative GTP-binding protein EngB [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026401|ref|YP_001722906.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pseudotuberculosis YPIII] gi|186893364|ref|YP_001870476.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pseudotuberculosis PB1/+] gi|218927240|ref|YP_002345115.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis CO92] gi|229836128|ref|ZP_04456296.1| GTP-binding protein [Yersinia pestis Pestoides A] gi|229839867|ref|ZP_04460026.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841949|ref|ZP_04462104.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. India 195] gi|229900594|ref|ZP_04515718.1| GTP-binding protein [Yersinia pestis Nepal516] gi|270488046|ref|ZP_06205120.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis KIM D27] gi|294502128|ref|YP_003566190.1| GTP-binding protein [Yersinia pestis Z176003] gi|24418384|sp|Q8ZJS0|ENGB_YERPE RecName: Full=Probable GTP-binding protein EngB gi|81640846|sp|Q66GG3|ENGB_YERPS RecName: Full=Probable GTP-binding protein EngB gi|119369282|sp|Q1C237|ENGB_YERPA RecName: Full=Probable GTP-binding protein EngB gi|119369283|sp|Q1CN51|ENGB_YERPN RecName: Full=Probable GTP-binding protein EngB gi|166232163|sp|A4TSG6|ENGB_YERPP RecName: Full=Probable GTP-binding protein EngB gi|166920115|sp|A7FCP5|ENGB_YERP3 RecName: Full=Probable GTP-binding protein EngB gi|238688493|sp|B1JR12|ENGB_YERPY RecName: Full=Probable GTP-binding protein EngB gi|238691333|sp|B2JYK5|ENGB_YERPB RecName: Full=Probable GTP-binding protein EngB gi|21960796|gb|AAM87354.1|AE013983_7 hypothetical protein y3809 [Yersinia pestis KIM 10] gi|45434740|gb|AAS60301.1| Predicted GTPases [Yersinia pestis biovar Microtus str. 91001] gi|51587659|emb|CAH19259.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|108774060|gb|ABG16579.1| cell division checkpoint GTPase YihA [Yersinia pestis Nepal516] gi|108781427|gb|ABG15485.1| cell division checkpoint GTPase YihA [Yersinia pestis Antiqua] gi|115345851|emb|CAL18709.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145212821|gb|ABP42228.1| cell division checkpoint GTPase YihA [Yersinia pestis Pestoides F] gi|149290325|gb|EDM40402.1| GTP-binding protein [Yersinia pestis CA88-4125] gi|152960213|gb|ABS47674.1| putative GTP-binding protein EngB [Yersinia pseudotuberculosis IP 31758] gi|165911840|gb|EDR30487.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. IP275] gi|165921924|gb|EDR39101.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. F1991016] gi|165989657|gb|EDR41958.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. E1979001] gi|166205158|gb|EDR49638.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. B42003004] gi|166962991|gb|EDR59012.1| putative GTP-binding protein EngB [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048499|gb|EDR59907.1| putative GTP-binding protein EngB [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167053973|gb|EDR63804.1| putative GTP-binding protein EngB [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752935|gb|ACA70453.1| GTP-binding protein HSR1-related [Yersinia pseudotuberculosis YPIII] gi|186696390|gb|ACC87019.1| GTP-binding protein HSR1-related [Yersinia pseudotuberculosis PB1/+] gi|229681933|gb|EEO78025.1| GTP-binding protein [Yersinia pestis Nepal516] gi|229690259|gb|EEO82313.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696233|gb|EEO86280.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706576|gb|EEO92582.1| GTP-binding protein [Yersinia pestis Pestoides A] gi|262360206|gb|ACY56927.1| GTP-binding protein [Yersinia pestis D106004] gi|262364153|gb|ACY60710.1| GTP-binding protein [Yersinia pestis D182038] gi|270336550|gb|EFA47327.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis KIM D27] gi|294352587|gb|ADE62928.1| GTP-binding protein [Yersinia pestis Z176003] gi|320017069|gb|ADW00641.1| GTP-binding protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 216 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 73 VD---------GVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 124 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNLVREAIIPF-MGDIQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 183 LKKIGVDKLREKL 195 >gi|89074465|ref|ZP_01160942.1| GTP-binding protein [Photobacterium sp. SKA34] gi|89049753|gb|EAR55303.1| GTP-binding protein [Photobacterium sp. SKA34] Length = 224 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPQDAGVEIAFAGRSNAGKSSALNRLTDQKGLARTSKTPGRTQLINMFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL R L+ + +L+D RH Sbjct: 72 VQGCN---------LIDLPGYGFAQVPLEMKLKWQKSLGEYLQRRECLQGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ + + ++LTK DKL + + K + + + +V SS Sbjct: 123 MKDLDQQMINWALESRLPVMVLLTKADKLKSGARKAQVLKIRQMTKEL-EGDVQVEAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ +R+ + E Sbjct: 182 LKGIGVDQVRRKLDEW 197 >gi|311069312|ref|YP_003974235.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus atrophaeus 1942] gi|310869829|gb|ADP33304.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus atrophaeus 1942] Length = 195 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 11/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYG+A+ K ++WG +I Y++ R L+ V ++D RH Sbjct: 69 D---------DLHFVDVPGYGFAKVSKTEREAWGRMIETYITTREELKAVVQIVDLRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + I+ TK DK+ + + + + P E+I SS Sbjct: 120 SADDVSMYDFLKHYGIPVIIIATKADKIPKGKWDKHAKVVRQTLNIEPE--DELILFSSE 177 Query: 195 KRKGIEVLRKAILETIN 211 +KG + AI + IN Sbjct: 178 TKKGKDEAWGAIKKMIN 194 >gi|15640143|ref|NP_229770.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587744|ref|ZP_01677505.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121728280|ref|ZP_01681311.1| conserved hypothetical protein [Vibrio cholerae V52] gi|153214830|ref|ZP_01949638.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|153822336|ref|ZP_01975003.1| conserved hypothetical protein [Vibrio cholerae B33] gi|153826298|ref|ZP_01978965.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|227080347|ref|YP_002808898.1| putative GTP-binding protein engB [Vibrio cholerae M66-2] gi|229508389|ref|ZP_04397893.1| GTP-binding protein EngB [Vibrio cholerae BX 330286] gi|229508930|ref|ZP_04398420.1| GTP-binding protein EngB [Vibrio cholerae B33] gi|229517044|ref|ZP_04406490.1| GTP-binding protein EngB [Vibrio cholerae RC9] gi|229520097|ref|ZP_04409525.1| GTP-binding protein EngB [Vibrio cholerae TM 11079-80] gi|229606662|ref|YP_002877310.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae MJ-1236] gi|254226590|ref|ZP_04920171.1| conserved hypothetical protein [Vibrio cholerae V51] gi|254291920|ref|ZP_04962701.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|254851495|ref|ZP_05240845.1| GTPase EngB [Vibrio cholerae MO10] gi|255743935|ref|ZP_05417890.1| GTP-binding protein EngB [Vibrio cholera CIRS 101] gi|262151174|ref|ZP_06028313.1| GTP-binding protein EngB [Vibrio cholerae INDRE 91/1] gi|298501120|ref|ZP_07010920.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae MAK 757] gi|12644600|sp|Q9KVN0|ENGB_VIBCH RecName: Full=Probable GTP-binding protein EngB gi|254783219|sp|C3LPV3|ENGB_VIBCM RecName: Full=Probable GTP-binding protein EngB gi|9654510|gb|AAF93289.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548043|gb|EAX58121.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121629410|gb|EAX61839.1| conserved hypothetical protein [Vibrio cholerae V52] gi|124115073|gb|EAY33893.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|125620862|gb|EAZ49215.1| conserved hypothetical protein [Vibrio cholerae V51] gi|126520162|gb|EAZ77385.1| conserved hypothetical protein [Vibrio cholerae B33] gi|149739966|gb|EDM54145.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|150422130|gb|EDN14096.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227008235|gb|ACP04447.1| putative GTP-binding protein engB [Vibrio cholerae M66-2] gi|229342885|gb|EEO07875.1| GTP-binding protein EngB [Vibrio cholerae TM 11079-80] gi|229346107|gb|EEO11079.1| GTP-binding protein EngB [Vibrio cholerae RC9] gi|229354047|gb|EEO18980.1| GTP-binding protein EngB [Vibrio cholerae B33] gi|229354662|gb|EEO19584.1| GTP-binding protein EngB [Vibrio cholerae BX 330286] gi|229369317|gb|ACQ59740.1| GTP-binding protein EngB [Vibrio cholerae MJ-1236] gi|254847200|gb|EET25614.1| GTPase EngB [Vibrio cholerae MO10] gi|255738418|gb|EET93808.1| GTP-binding protein EngB [Vibrio cholera CIRS 101] gi|262031068|gb|EEY49693.1| GTP-binding protein EngB [Vibrio cholerae INDRE 91/1] gi|297540154|gb|EFH76215.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae MAK 757] Length = 220 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AD---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|145633154|ref|ZP_01788886.1| GTP-binding protein [Haemophilus influenzae 3655] gi|145635886|ref|ZP_01791575.1| GTP-binding protein [Haemophilus influenzae PittAA] gi|229843849|ref|ZP_04463990.1| GTPase EngB [Haemophilus influenzae 6P18H1] gi|229846150|ref|ZP_04466262.1| GTPase EngB [Haemophilus influenzae 7P49H1] gi|144986380|gb|EDJ92959.1| GTP-binding protein [Haemophilus influenzae 3655] gi|145266869|gb|EDK06884.1| GTP-binding protein [Haemophilus influenzae PittAA] gi|229811154|gb|EEP46871.1| GTPase EngB [Haemophilus influenzae 7P49H1] gi|229812843|gb|EEP48531.1| GTPase EngB [Haemophilus influenzae 6P18H1] Length = 205 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGLVVLMDIRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S+ + GI+ L + Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKLAAKL 195 >gi|50914055|ref|YP_060027.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS10394] gi|94994180|ref|YP_602278.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes MGAS10750] gi|139473949|ref|YP_001128665.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus pyogenes str. Manfredo] gi|73919335|sp|Q5XCL9|ENGB_STRP6 RecName: Full=Probable GTP-binding protein EngB gi|119369272|sp|Q1J740|ENGB_STRPF RecName: Full=Probable GTP-binding protein EngB gi|166225987|sp|A2RF16|ENGB_STRPG RecName: Full=Probable GTP-binding protein EngB gi|50903129|gb|AAT86844.1| YihA [Streptococcus pyogenes MGAS10394] gi|94547688|gb|ABF37734.1| GTP-binding protein YihA [Streptococcus pyogenes MGAS10750] gi|134272196|emb|CAM30442.1| putative GTP-binding protein [Streptococcus pyogenes str. Manfredo] Length = 199 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 101/210 (48%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PEIA +GRSNVGKSS IN ++ RKNLARTS+ Sbjct: 1 MAEEQVLNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSS 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF N + VD+PGYGYA+ K WG +I YL+ R Sbjct: 61 KPGKTQLLNFF---------NIDNKLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH + D ++ FL + +V TK DK+ + K + Sbjct: 112 LRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVATKADKIPRGKWNKHESVVKKALN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I SSV+R GI+ AILE + Sbjct: 171 -FDKSDTFIVFSSVERIGIDDSWDAILEQV 199 >gi|257869244|ref|ZP_05648897.1| GTP-binding protein [Enterococcus gallinarum EG2] gi|257803408|gb|EEV32230.1| GTP-binding protein [Enterococcus gallinarum EG2] Length = 195 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVSPAQYPDTHLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQTLNFYLI- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + VD+PGYGYA+ K WG +I YL+ER LR V L+D RH Sbjct: 68 --------ENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLAERQQLRAVVSLVDLRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + +V TK DK+ + K + P I SS+ Sbjct: 120 SQEDIQMYQFLKYYEIPVIVVATKADKIPRGKWNKHESVIKKALEFDPA--DTFILFSSI 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E +AI I Sbjct: 178 TKQGKEEAWQAIEAAI 193 >gi|262282293|ref|ZP_06060061.1| GTPase EngB [Streptococcus sp. 2_1_36FAA] gi|262261584|gb|EEY80282.1| GTPase EngB [Streptococcus sp. 2_1_36FAA] Length = 197 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 78/197 (39%), Positives = 99/197 (50%), Gaps = 11/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFF--- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 N + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 68 ------NIDNKLRFVDVPGYGYAKVSKTERAKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + P I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVILVATKADKIPRGKWNKHESAIKKKLNFDPA--DTFILFSSV 179 Query: 195 KRKGIEVLRKAILETIN 211 + GI+ AILE +N Sbjct: 180 DKTGIDASWNAILEKVN 196 >gi|237727973|ref|ZP_04558454.1| GTPase EngB [Citrobacter sp. 30_2] gi|226910230|gb|EEH96148.1| GTPase EngB [Citrobacter sp. 30_2] Length = 210 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VDGK---------RLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + V ++LTK DKL+ + L + + + +V SS Sbjct: 122 LKDLDQQMILWAVESNVQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 180 Query: 194 VKRKGIEVLRKAILET 209 +K+ G++ LR+ + Sbjct: 181 LKKLGVDKLRQKLDSW 196 >gi|327474151|gb|EGF19561.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK408] Length = 195 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYNIPVILVATKADKIPRGKWNKHESAIKKKLD--FDKNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 TKDGLDASWDAILSKI 195 >gi|162319777|ref|YP_423720.2| ribosome biogenesis GTP-binding protein YsxC [Magnetospirillum magneticum AMB-1] Length = 187 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 93/193 (48%), Positives = 114/193 (59%), Gaps = 9/193 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++G + LP A E+AF+GRSNVGKSSLIN L R LARTSN PGRTQ LNFF Sbjct: 1 MQGASGLDHLPAATLTEVAFAGRSNVGKSSLINALTGRNTLARTSNTPGRTQELNFF--- 57 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 N + LVDMPGYG+A+APK V+ W L+ +L RS LR +L+D RHG+ Sbjct: 58 ------NLGGRLILVDMPGYGFAQAPKGLVEKWTRLVNGFLKGRSVLRRAVVLVDSRHGL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K D+D+ LDK AV YQ+VLTK DKL +T I+ AHP +I TSS Sbjct: 112 KDSDRDMMKMLDKAAVVYQVVLTKADKLKAAELDAVQARTLEEIKGRVAAHPHLIVTSSE 171 Query: 195 KRKGIEVLRKAIL 207 K GI LR + Sbjct: 172 KGTGIPELRAELA 184 >gi|262404848|ref|ZP_06081402.1| GTP-binding protein EngB [Vibrio sp. RC586] gi|262348932|gb|EEY98071.1| GTP-binding protein EngB [Vibrio sp. RC586] Length = 220 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + W + YL R L+ + +L+D RH Sbjct: 72 AE---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQRRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREDAKQF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|260914707|ref|ZP_05921172.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella dagmatis ATCC 43325] gi|260631211|gb|EEX49397.1| ribosome biogenesis GTP-binding protein YsxC [Pasteurella dagmatis ATCC 43325] Length = 205 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 104/201 (51%), Gaps = 10/201 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +LP+ EIAF+GRSN GKS+ +N L N+K+LARTS Sbjct: 1 MSDIKLNYHKTHFLTSAPNIRVLPEDSGIEIAFAGRSNAGKSTALNALTNQKSLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPKCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V +L+D RH +K +DQ + + + I+LTK DKLS + + ++ + I + Sbjct: 112 AGVVVLMDIRHPLKDLDQQMVEWAISADLPVLILLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVL 202 +V S+ + GI+ L Sbjct: 172 Q-GDVQVEAFSAQNKIGIDRL 191 >gi|229515855|ref|ZP_04405313.1| GTP-binding protein EngB [Vibrio cholerae TMA 21] gi|229347118|gb|EEO12079.1| GTP-binding protein EngB [Vibrio cholerae TMA 21] Length = 220 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AD---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|332159649|ref|YP_004296226.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318603743|emb|CBY25241.1| GTP-binding protein EngB [Yersinia enterocolitica subsp. palearctica Y11] gi|325663879|gb|ADZ40523.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330858979|emb|CBX69338.1| putative GTP-binding protein engB [Yersinia enterocolitica W22703] Length = 217 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 10/200 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F+ P+I LP+ E+AF+GRSN GKSS +N L +K+LARTS PGRTQ Sbjct: 6 FNYHMTHFVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTGQKSLARTSKTPGRTQ 65 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F + + LVD+PGYGYA P++ W + YL +R+ L+ + + Sbjct: 66 LINLFEVVE---------GVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVV 116 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + ++ ++LTK DKL+ + L + I + Sbjct: 117 LMDIRHPLKDLDQQMITWAVAVGTPVMLLLTKADKLASGARKAQLNMVREAIIPF-MGDI 175 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 +V SS+K+ G++ LR+ + Sbjct: 176 QVEAFSSLKKIGVDKLREKL 195 >gi|291085891|ref|ZP_06354360.2| hypothetical protein CIT292_08820 [Citrobacter youngae ATCC 29220] gi|291069529|gb|EFE07638.1| ribosome biogenesis GTP-binding protein YsxC [Citrobacter youngae ATCC 29220] Length = 215 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 107/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 16 FVMSAPDIRHLPSDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 76 VDGK---------RLVDLPGYGYAEVPEEMKRKWQRALAEYLEKRQSLQGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + V ++LTK DKL+ + L + + + +V SS Sbjct: 127 LKDLDQQMILWAVESNVQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSS 185 Query: 194 VKRKGIEVLRKAILET 209 +K+ G++ LR+ + Sbjct: 186 LKKLGVDKLRQKLDSW 201 >gi|330444880|ref|ZP_08308535.1| cell division protein putative checkpoint GTPase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489190|dbj|GAA03032.1| cell division protein putative checkpoint GTPase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 221 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 107/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + ++K+LARTS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPQDAGVEIAFAGRSNAGKSSALNRITDQKSLARTSKTPGRTQLINMFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL R L+ + +L+D RH Sbjct: 72 VSGCN---------LIDLPGYGFAQVPLEMKLKWQKSLGEYLQRRECLQGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + S+ + + ++LTK DKL + + K + + + +V SS Sbjct: 123 MKDLDQQMISWAIESRLPVLVLLTKADKLKSGARKAQVLKIRQMTAEF-GGDVQVEAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ +R+ + E Sbjct: 182 LKGIGVDQVRRKLDEW 197 >gi|90581062|ref|ZP_01236862.1| GTP-binding protein [Vibrio angustum S14] gi|90437758|gb|EAS62949.1| GTP-binding protein [Vibrio angustum S14] Length = 224 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 107/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPQDAGVEIAFAGRSNAGKSSALNRLTDQKGLARTSKTPGRTQLINMFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL R L+ + +L+D RH Sbjct: 72 VQGCN---------LIDLPGYGFAQVPLEMKLKWQKSLGEYLQRRECLQGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ + + ++LTK DKL + + K + + ++ +V SS Sbjct: 123 MKDLDQQMINWALESRLPVLVLLTKADKLKSGARKAQVLKIRQMTKDL-EGEVQVEAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ +R+ + E Sbjct: 182 LKGIGVDQVRRKLDEW 197 >gi|255536601|ref|YP_003096972.1| GTP-binding protein EngB [Flavobacteriaceae bacterium 3519-10] gi|255342797|gb|ACU08910.1| GTP-binding protein EngB [Flavobacteriaceae bacterium 3519-10] Length = 206 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 104/196 (53%), Gaps = 9/196 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+ PE AF GRSNVGKSSLIN ++N K+LA+TS PG+TQ +N FV Sbjct: 8 FVTSSARWQDCPEPTMPEYAFIGRSNVGKSSLINAMLNFKDLAKTSQTPGKTQLINHFVI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L D+PGYGYAR K + LI Y+ R L +++L+D RH Sbjct: 68 NE---------QWFLTDLPGYGYARVSKTKRKEFEKLITNYILNRKNLVNLFVLVDARHT 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + + + +V + IV TK DKL P T +E K + PE+ TS+ Sbjct: 119 PQKIDIEFIEWCGENSVPFSIVFTKADKLKPNTVISNVEHYKTELLKTWEDLPEIFVTSA 178 Query: 194 VKRKGIEVLRKAILET 209 KR G + + K I +T Sbjct: 179 EKRDGTDEVLKLISKT 194 >gi|150008077|ref|YP_001302820.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides distasonis ATCC 8503] gi|255014915|ref|ZP_05287041.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_7] gi|256840744|ref|ZP_05546252.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp. D13] gi|262381349|ref|ZP_06074487.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_33B] gi|298376570|ref|ZP_06986525.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_19] gi|166225966|sp|A6LBY4|ENGB_PARD8 RecName: Full=Probable GTP-binding protein EngB gi|149936501|gb|ABR43198.1| GTP-binding protein [Parabacteroides distasonis ATCC 8503] gi|256738016|gb|EEU51342.1| ribosome biogenesis GTP-binding protein YsxC [Parabacteroides sp. D13] gi|262296526|gb|EEY84456.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_33B] gi|298266448|gb|EFI08106.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_19] Length = 200 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ ++ P+ PE AF GRSNVGKSSLIN+L N+K LA TS PG+T +N Sbjct: 4 KSAEFVISNTDVRKCPEGNKPEYAFIGRSNVGKSSLINMLTNKKGLAMTSQTPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A+ K+N + +I Y+ +R L +++L+D Sbjct: 64 HFLINN---------EWYLVDLPGYGFAQRGKENREQLKRIIENYILDREQLTNLFVLLD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 CRH ++ID + +L + V + I+ TKIDK+S +E L+ + P + Sbjct: 115 CRHEAQKIDLEFMEWLGESGVPFSIIFTKIDKISKGRLKENLKVYTDKLLETWEELPPIF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 +SS K++G + + I E+IN Sbjct: 175 LSSSEKKEGRDEILDYI-ESIN 195 >gi|209965569|ref|YP_002298484.1| ribosome biogenesis GTP-binding protein YsxC [Rhodospirillum centenum SW] gi|209959035|gb|ACI99671.1| GTP-binding protein, putative [Rhodospirillum centenum SW] Length = 224 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 89/193 (46%), Positives = 109/193 (56%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F G P LP+A PE+ F+GRSNVGKSSL+N L R LARTS PGRTQ LNFF Sbjct: 33 FFWGAPAASELPEADLPEVCFAGRSNVGKSSLVNALTGRVTLARTSQTPGRTQQLNFFNL 92 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVDMPGYGYA+ K+ +W YL R TLR +L+D RHG Sbjct: 93 GDR---------LVLVDMPGYGYAKVSKETSSAWTDFAKSYLKGRVTLRRALVLVDSRHG 143 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D D+ +D+ AV+YQIVLTK DKL+ + +P AHPEV+ TSS Sbjct: 144 LKPQDIDMMKMMDQAAVAYQIVLTKADKLTDKALVHARAAVAAALVKHPAAHPEVMATSS 203 Query: 194 VKRKGIEVLRKAI 206 GI LR + Sbjct: 204 ESGLGIAELRATL 216 >gi|15673134|ref|NP_267308.1| GTPase EngB [Lactococcus lactis subsp. lactis Il1403] gi|281491648|ref|YP_003353628.1| GTP-binding protein EngB [Lactococcus lactis subsp. lactis KF147] gi|18202795|sp|Q9CGE5|ENGB_LACLA RecName: Full=Probable GTP-binding protein EngB gi|12724115|gb|AAK05250.1|AE006347_8 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403] gi|281375366|gb|ADA64879.1| GTP-binding protein EngB [Lactococcus lactis subsp. lactis KF147] gi|326406699|gb|ADZ63770.1| GTP-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 195 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 99/195 (50%), Gaps = 11/195 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+ PEIA +GRSNVGKSS IN L+NRKN ARTS PG+TQ LNF+ D Sbjct: 12 ISAASKKQYPENDWPEIALAGRSNVGKSSFINTLLNRKNFARTSGQPGKTQLLNFYNIDD 71 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH Sbjct: 72 ---------QLHFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLKAVVSLVDIRHEPS 122 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D ++ FL + +V TK DK+ + K ++ + + I SS Sbjct: 123 EDDLMMYEFLKYYHIPVILVATKADKVPRGKWNKHESIIKKAMK--FDSTDDFIIFSSTD 180 Query: 196 RKGIEVLRKAILETI 210 + G E +AIL + Sbjct: 181 KTGFEEAWEAILRYL 195 >gi|153803406|ref|ZP_01957992.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124121063|gb|EAY39806.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 220 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AD---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|332523732|ref|ZP_08399984.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus porcinus str. Jelinkova 176] gi|332314996|gb|EGJ27981.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus porcinus str. Jelinkova 176] Length = 199 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 99/210 (47%), Gaps = 11/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PEIA +GRSNVGKSS IN ++ RKNLARTS Sbjct: 1 MTEEQVLNTHNAGLLLSAANKSHYPQDNIPEIALAGRSNVGKSSFINTILGRKNLARTSA 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNFF D + VD+PGYGYA+ K WG +I YL R Sbjct: 61 KPGKTQLLNFFNIDD---------KIRFVDVPGYGYAKVSKTERARWGKMIEEYLVNREN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH D ++ FL + +V TK DK+ + K + Sbjct: 112 LRVVVSLVDLRHEPSGEDVQMYEFLKYYEIPVIVVATKADKIPRGKWNKHEAMVKKKLN- 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++ + I SSV R GI+ +IL + Sbjct: 171 -FDSNDQFIIFSSVDRLGIDQAWDSILAMV 199 >gi|157373117|ref|YP_001481106.1| ribosome biogenesis GTP-binding protein YsxC [Serratia proteamaculans 568] gi|166920114|sp|A8GLI8|ENGB_SERP5 RecName: Full=Probable GTP-binding protein EngB gi|157324881|gb|ABV43978.1| GTP-binding protein HSR1-related [Serratia proteamaculans 568] Length = 216 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 10/205 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ Sbjct: 6 YNYHVTHFVTSAPDIRHLPGDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQ 65 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F ++ + LVD+PGYGYA P++ W + YL R+ L+ + + Sbjct: 66 LINLFEVEE---------GIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNCLKGLVV 116 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + + + ++LTK DKL+ + L + + + Sbjct: 117 LMDIRHPLKDLDQQMIQWAVEVGTPVLLLLTKADKLASGARKAQLNMVREAVVPF-MGDI 175 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 +V SS K+ G++ L + + N Sbjct: 176 QVEAFSSPKKIGVDKLSQKLNTWFN 200 >gi|238797622|ref|ZP_04641118.1| GTP-binding protein engB [Yersinia mollaretii ATCC 43969] gi|238718486|gb|EEQ10306.1| GTP-binding protein engB [Yersinia mollaretii ATCC 43969] Length = 207 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VD---------GVRLVDLPGYGYAEVPEEMKIKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKIGVDKLREKL 186 >gi|322389612|ref|ZP_08063160.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis ATCC 903] gi|321143611|gb|EFX39041.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis ATCC 903] Length = 200 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 80/198 (40%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PE+A +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + LVD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH Sbjct: 71 D---------KLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLKAVVSLVDFRHEP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + P+ I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVILVATKADKIPRGKWNKHESIIKKKLDFDPS--DTFIVFSSV 179 Query: 195 KRKGIEVLRKAILETINY 212 ++G+E AILE Y Sbjct: 180 TKEGLEKSWDAILENAFY 197 >gi|315633423|ref|ZP_07888714.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter segnis ATCC 33393] gi|315477923|gb|EFU68664.1| ribosome biogenesis GTP-binding protein YsxC [Aggregatibacter segnis ATCC 33393] Length = 204 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 105/201 (52%), Gaps = 10/201 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P + LP+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTHFLTSSPNLKSLPEDSGVEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGIVILMDIRHPLKDLDQQMIEWAVASKLPVLLLLTKADKLSQSERSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVL 202 +V S++KR GI+ L Sbjct: 172 Q-GDIQVEAFSALKRTGIDRL 191 >gi|90415434|ref|ZP_01223368.1| hypothetical protein GB2207_08961 [marine gamma proteobacterium HTCC2207] gi|90332757|gb|EAS47927.1| hypothetical protein GB2207_08961 [marine gamma proteobacterium HTCC2207] Length = 236 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 105/216 (48%), Gaps = 17/216 (7%) Query: 4 HTIFTKSAWI------FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLAR 57 IF S I FL P I P+ E+AF+GRSN GKSS IN L + LAR Sbjct: 21 DPIFMDSNHIDYQRVTFLTSAPSIKQCPEDSGCEVAFAGRSNAGKSSAINTLTRIRGLAR 80 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 TS PGRTQ +NFF + LVD+PGYGYA+ P + W + YL Sbjct: 81 TSKTPGRTQLINFFDLGNDK---------RLVDLPGYGYAKVPIEMKREWDRDLAEYLQL 131 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 R +L + LL+D RH +++ D + ++ + + I+LTK DKL Q L + Sbjct: 132 RQSLAGLVLLMDIRHPLQEFDLQMLNWAAQAGLPVHILLTKSDKLKRGPGQNALLMVERH 191 Query: 178 IRNYPTAHP--EVIPTSSVKRKGIEVLRKAILETIN 211 +R+ V SS+K++G+ L + +N Sbjct: 192 LRDMDPGCTLLSVQTFSSLKKQGLPELESVLAHWLN 227 >gi|153833801|ref|ZP_01986468.1| GTP-binding protein [Vibrio harveyi HY01] gi|148869859|gb|EDL68827.1| GTP-binding protein [Vibrio harveyi HY01] Length = 219 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 72 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 123 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETF-GGDVSVDVFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 182 LKGLGVDQLRAKL 194 >gi|162420510|ref|YP_001604665.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia pestis Angola] gi|238687242|sp|A9QYI0|ENGB_YERPG RecName: Full=Probable GTP-binding protein EngB gi|162353325|gb|ABX87273.1| putative GTP-binding protein EngB [Yersinia pestis Angola] Length = 216 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 73 VD---------GVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 124 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGACKAQLNLVREAIIPF-MGDIQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 183 LKKIGVDKLREKL 195 >gi|89110163|ref|AP_003943.1| GTP-binding protein [Escherichia coli str. K-12 substr. W3110] gi|170083337|ref|YP_001732657.1| GTP-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|209921338|ref|YP_002295422.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli SE11] gi|218556424|ref|YP_002389338.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli IAI1] gi|218560940|ref|YP_002393853.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli S88] gi|218692151|ref|YP_002400363.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli ED1a] gi|218697578|ref|YP_002405245.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli 55989] gi|218701436|ref|YP_002409065.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli IAI39] gi|218707490|ref|YP_002415009.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli UMN026] gi|254163816|ref|YP_003046924.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B str. REL606] gi|300819243|ref|ZP_07099443.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 107-1] gi|300823684|ref|ZP_07103810.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 119-7] gi|300896904|ref|ZP_07115391.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 198-1] gi|300906179|ref|ZP_07123892.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 84-1] gi|300919046|ref|ZP_07135591.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 115-1] gi|300925949|ref|ZP_07141782.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 182-1] gi|300931705|ref|ZP_07147011.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 187-1] gi|300937087|ref|ZP_07151950.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 21-1] gi|300948175|ref|ZP_07162303.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 116-1] gi|300958280|ref|ZP_07170425.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 175-1] gi|301023770|ref|ZP_07187506.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 69-1] gi|301303330|ref|ZP_07209454.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 124-1] gi|301328178|ref|ZP_07221308.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 78-1] gi|301648437|ref|ZP_07248169.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 146-1] gi|309797830|ref|ZP_07692213.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 145-7] gi|312971850|ref|ZP_07786024.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|85676194|dbj|BAE77444.1| GTP-binding protein [Escherichia coli str. K12 substr. W3110] gi|169891172|gb|ACB04879.1| GTP-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|209914597|dbj|BAG79671.1| GTP-binding protein [Escherichia coli SE11] gi|218354310|emb|CAQ86984.2| GTP-binding protein [Escherichia coli 55989] gi|218363193|emb|CAR00835.1| GTP-binding protein [Escherichia coli IAI1] gi|218367709|emb|CAR05498.1| GTP-binding protein [Escherichia coli S88] gi|218371422|emb|CAR19255.1| GTP-binding protein [Escherichia coli IAI39] gi|218429715|emb|CAV18037.1| GTP-binding protein [Escherichia coli ED1a] gi|218434587|emb|CAR15516.1| GTP-binding protein [Escherichia coli UMN026] gi|242379402|emb|CAQ34216.1| cell division protein; predicted checkpoint GTPase [Escherichia coli BL21(DE3)] gi|253975717|gb|ACT41388.1| GTP-binding protein [Escherichia coli B str. REL606] gi|253979873|gb|ACT45543.1| GTP-binding protein [Escherichia coli BL21(DE3)] gi|300315049|gb|EFJ64833.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 175-1] gi|300359270|gb|EFJ75140.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 198-1] gi|300396884|gb|EFJ80422.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 69-1] gi|300402015|gb|EFJ85553.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 84-1] gi|300413838|gb|EFJ97148.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 115-1] gi|300417986|gb|EFK01297.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 182-1] gi|300452285|gb|EFK15905.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 116-1] gi|300457830|gb|EFK21323.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 21-1] gi|300460511|gb|EFK24004.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 187-1] gi|300523746|gb|EFK44815.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 119-7] gi|300528129|gb|EFK49191.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 107-1] gi|300841284|gb|EFK69044.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 124-1] gi|300845351|gb|EFK73111.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 78-1] gi|301073492|gb|EFK88298.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 146-1] gi|308118586|gb|EFO55848.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 145-7] gi|309704290|emb|CBJ03639.1| probable GTP-binding protein [Escherichia coli ETEC H10407] gi|310334227|gb|EFQ00432.1| conserved hypothetical protein [Escherichia coli 1827-70] gi|315254226|gb|EFU34194.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 85-1] gi|315618770|gb|EFU99354.1| conserved hypothetical protein [Escherichia coli 3431] gi|323161075|gb|EFZ46993.1| hypothetical protein ECE128010_2621 [Escherichia coli E128010] gi|323167490|gb|EFZ53197.1| hypothetical protein SS53G_2212 [Shigella sonnei 53G] gi|323174271|gb|EFZ59898.1| hypothetical protein ECLT68_1102 [Escherichia coli LT-68] gi|323177874|gb|EFZ63458.1| hypothetical protein ECOK1180_3470 [Escherichia coli 1180] gi|323182381|gb|EFZ67788.1| hypothetical protein ECOK1357_4237 [Escherichia coli 1357] gi|324019780|gb|EGB88999.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli MS 117-3] Length = 198 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 106/191 (55%), Gaps = 10/191 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 1 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K Sbjct: 61 GK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLK 111 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +DQ + + ++ ++LTK DKL+ + L + + + +V SS+K Sbjct: 112 DLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLK 170 Query: 196 RKGIEVLRKAI 206 ++G++ LR+ + Sbjct: 171 KQGVDKLRQKL 181 >gi|161505499|ref|YP_001572611.1| hypothetical protein SARI_03659 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866846|gb|ABX23469.1| hypothetical protein SARI_03659 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 198 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 10/194 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 1 MSAPDIRHLPSDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVD 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K Sbjct: 61 GK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLK 111 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +DQ + + + + ++LTK DKL+ + L + + + +V SS+K Sbjct: 112 DLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNIVREAVLAF-NGDVQVEAFSSLK 170 Query: 196 RKGIEVLRKAILET 209 ++G++ LR+ + Sbjct: 171 KQGVDKLRQKLDSW 184 >gi|197364777|ref|YP_002144414.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197096254|emb|CAR61852.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|261249117|emb|CBG26978.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301160509|emb|CBW20039.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 199 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 1 MMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVV 60 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH + Sbjct: 61 DGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K +DQ + + + + ++LTK DKL+ + L + + + +V SS+ Sbjct: 112 KDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSSL 170 Query: 195 KRKGIEVLRKAILET 209 K++G++ LR+ + Sbjct: 171 KKQGVDKLRQKLDSW 185 >gi|24379393|ref|NP_721348.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus mutans UA159] gi|290580605|ref|YP_003484997.1| putative GTP-binding protein [Streptococcus mutans NN2025] gi|81845282|sp|Q8DUH9|ENGB_STRMU RecName: Full=Probable GTP-binding protein EngB gi|24377323|gb|AAN58654.1|AE014935_6 putative GTP-binding protein [Streptococcus mutans UA159] gi|254997504|dbj|BAH88105.1| putative GTP-binding protein [Streptococcus mutans NN2025] Length = 197 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 80/209 (38%), Positives = 108/209 (51%), Gaps = 12/209 (5%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S + T +A I L P+ PEIA +GRSNVGKSS IN L+ RKNLARTS+ Sbjct: 1 MSEFLNTHNASILL-SAVNKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSK 59 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG+TQ LNF+ D + VD+PGYGYA+ KK WG +I YL+ R L Sbjct: 60 PGKTQSLNFYNIDD---------KLRFVDVPGYGYAKVSKKERAKWGKMIEEYLTSRENL 110 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 R V L+D RH D ++ FL + +V TK DK+ + K + Sbjct: 111 RAVVSLVDFRHDPSSDDVQMYDFLKYYEIPVILVATKADKVPRGKWNKQESAIKKKLD-- 168 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++ I SSV R G++ AILE++ Sbjct: 169 FDSNDAFIIFSSVDRTGLDTSWDAILESL 197 >gi|68249669|ref|YP_248781.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae 86-028NP] gi|81335901|sp|Q4QLH6|ENGB_HAEI8 RecName: Full=Probable GTP-binding protein EngB gi|68057868|gb|AAX88121.1| probable GTP-binding protein EngB [Haemophilus influenzae 86-028NP] Length = 205 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGLVVLMDIRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S+ + GI+ L + Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKLAAKL 195 >gi|167762858|ref|ZP_02434985.1| hypothetical protein BACSTE_01221 [Bacteroides stercoris ATCC 43183] gi|167699198|gb|EDS15777.1| hypothetical protein BACSTE_01221 [Bacteroides stercoris ATCC 43183] Length = 202 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N Sbjct: 5 SAEFVISNTDVKKCPGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ +VD+PGYGYA+ +K + +I Y+ +R + C+++L+D Sbjct: 65 FLIN---------KNWYIVDLPGYGYAKRGQKGQEQIQRIIETYILQREQMTCLFVLVDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + ID +L + V + IV TK DKL + +R P Sbjct: 116 RHEPQAIDLAFIEWLGENGVPFAIVFTKADKLKGGRINSNIRHYLEKLREQWEELPPHFI 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 TSS R G + L I E IN Sbjct: 176 TSSENRMGRDELLGYI-EQIN 195 >gi|156972896|ref|YP_001443803.1| GTPase EngB [Vibrio harveyi ATCC BAA-1116] gi|156524490|gb|ABU69576.1| hypothetical protein VIBHAR_00574 [Vibrio harveyi ATCC BAA-1116] Length = 223 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 127 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 186 LKGLGVDQLRAKL 198 >gi|269959442|ref|ZP_06173825.1| GTP-binding protein [Vibrio harveyi 1DA3] gi|269835879|gb|EEZ89955.1| GTP-binding protein [Vibrio harveyi 1DA3] Length = 223 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 EE---------GCHIVDLPGYGFAQVPIEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 127 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 186 LKGLGVDQLRAKL 198 >gi|84386307|ref|ZP_00989335.1| Predicted GTPase [Vibrio splendidus 12B01] gi|84378731|gb|EAP95586.1| Predicted GTPase [Vibrio splendidus 12B01] Length = 219 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + N+K LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKGLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL R +L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQRRESLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + L K + +++ V SS Sbjct: 123 MKDLDQQMIYWAIDSRIPVQVLLTKADKLKSGARKAQLLKIRNDAKSF-GGDVAVDVFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR + E Sbjct: 182 MKGIGVDQLRAKMDEW 197 >gi|16273043|ref|NP_439275.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae Rd KW20] gi|145630217|ref|ZP_01785999.1| GTP-binding protein [Haemophilus influenzae R3021] gi|148828278|ref|YP_001293031.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae PittGG] gi|260580203|ref|ZP_05848033.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae RdAW] gi|1176322|sp|P46453|ENGB_HAEIN RecName: Full=Probable GTP-binding protein EngB gi|166225959|sp|A5UIP2|ENGB_HAEIG RecName: Full=Probable GTP-binding protein EngB gi|1574673|gb|AAC22772.1| conserved hypothetical GTP-binding protein [Haemophilus influenzae Rd KW20] gi|144984498|gb|EDJ91921.1| GTP-binding protein [Haemophilus influenzae R3021] gi|148719520|gb|ABR00648.1| GTP-binding protein [Haemophilus influenzae PittGG] gi|260093487|gb|EEW77420.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae RdAW] Length = 205 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 103/201 (51%), Gaps = 10/201 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGLVVLMDIRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVL 202 +V S+ + GI+ L Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKL 191 >gi|300727729|ref|ZP_07061115.1| GTP-binding protein [Prevotella bryantii B14] gi|299775017|gb|EFI71623.1| GTP-binding protein [Prevotella bryantii B14] Length = 200 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 103/200 (51%), Gaps = 9/200 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F P + PK PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N Sbjct: 4 KKSEFTISAPTVSKCPKDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A+ K +I Y+ +R L V++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGFAKRSKSVQQKLEQMISSYILQRQQLYNVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID++ +L K + + IV TK DKL P A++ E +++ P Sbjct: 115 VRHEQQKIDREFVDWLGKSQIPFAIVFTKADKLGPVKAKKNAEAWMKQLQDTWEDLPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILET 209 TSS K+ G E + I + Sbjct: 175 ITSSEKKLGKEEILDYIEQW 194 >gi|300774436|ref|ZP_07084299.1| ribosome biogenesis GTP-binding protein YsxC [Chryseobacterium gleum ATCC 35910] gi|300506251|gb|EFK37386.1| ribosome biogenesis GTP-binding protein YsxC [Chryseobacterium gleum ATCC 35910] Length = 217 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 9/206 (4%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 H+ F++ + P+ PE AF GRSNVGKSSLIN ++N K+LA+TS PG Sbjct: 8 HSKMIIKTAEFVKSSGKWQECPEPNIPEYAFIGRSNVGKSSLINAMMNHKDLAKTSQTPG 67 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 +TQ +N F+ + L D+PGYGYA+ K + LI Y+ R L Sbjct: 68 KTQLINHFLVNE---------NWYLTDLPGYGYAKVSKVQRKDFEKLITNYILNRRNLVN 118 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 +++L+D RH ++ID + + + + + IV TK DKL P + +E K + Sbjct: 119 LFVLVDVRHTPQKIDLEFIQWCGESGIPFSIVFTKADKLKPNAVIKNVEDYKAELHKTWE 178 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILET 209 PE+ TS+ K++G + + I +T Sbjct: 179 DLPELYITSAEKKEGGDKILDFIQKT 204 >gi|270265260|ref|ZP_06193522.1| probable GTP-binding protein EngB [Serratia odorifera 4Rx13] gi|270040894|gb|EFA13996.1| probable GTP-binding protein EngB [Serratia odorifera 4Rx13] Length = 215 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 10/205 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ Sbjct: 6 YNYHVTHFVTSAPDIRHLPGDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQ 65 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F ++ + LVD+PGYGYA P++ W + YL R+ L+ + + Sbjct: 66 LINLFEVEE---------GIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNCLKGLVV 116 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + + ++LTK DKL+ + L + + + Sbjct: 117 LMDIRHPLKDLDQQMIQWAVDVGTPVLVLLTKADKLASGARKAQLNMVREAVVPF-MGDI 175 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 +V SS K+ G++ L + + N Sbjct: 176 QVEAFSSPKKIGVDKLSQKLNTWFN 200 >gi|59710682|ref|YP_203458.1| GTPase EngB [Vibrio fischeri ES114] gi|75431909|sp|Q5E8S6|ENGB_VIBF1 RecName: Full=Probable GTP-binding protein EngB gi|59478783|gb|AAW84570.1| cell division GTPase YihA [Vibrio fischeri ES114] Length = 215 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 EENC---------HIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLQGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K IDQ + + + + QI+LTK DKL + + K + ++ EV SS Sbjct: 123 LKDIDQQLVFWAVDQNIPVQILLTKADKLKSGARKAQVLKVREAAVDF-GGEVEVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR + E Sbjct: 182 LKGIGVDKLRAKLDEW 197 >gi|229525007|ref|ZP_04414412.1| GTP-binding protein EngB [Vibrio cholerae bv. albensis VL426] gi|229338588|gb|EEO03605.1| GTP-binding protein EngB [Vibrio cholerae bv. albensis VL426] Length = 220 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AD---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|229527147|ref|ZP_04416541.1| GTP-binding protein EngB [Vibrio cholerae 12129(1)] gi|229335378|gb|EEO00861.1| GTP-binding protein EngB [Vibrio cholerae 12129(1)] Length = 220 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AD---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|238755603|ref|ZP_04616940.1| GTP-binding protein engB [Yersinia ruckeri ATCC 29473] gi|238706203|gb|EEP98583.1| GTP-binding protein engB [Yersinia ruckeri ATCC 29473] Length = 216 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 73 TD---------GIRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 124 LKDLDQQMITWAVAVGTPVMLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVETFSS 182 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 183 LKKIGVDKLREKL 195 >gi|157151518|ref|YP_001450428.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus gordonii str. Challis substr. CH1] gi|189037195|sp|A8AXB8|ENGB_STRGC RecName: Full=Probable GTP-binding protein EngB gi|157076312|gb|ABV10995.1| GTP-binding protein [Streptococcus gordonii str. Challis substr. CH1] Length = 197 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 76/197 (38%), Positives = 98/197 (49%), Gaps = 11/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN ++NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYAKVSKTERAKWGRMIEEYLTSRENLRAVVSLVDLRHEP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVILVATKADKIPRGKWNKHESAIKKKLN--FDQADTFILFSSV 179 Query: 195 KRKGIEVLRKAILETIN 211 + G++ AILE +N Sbjct: 180 DKTGLDASWDAILEKVN 196 >gi|238785636|ref|ZP_04629614.1| GTP-binding protein engB [Yersinia bercovieri ATCC 43970] gi|238713471|gb|EEQ05505.1| GTP-binding protein engB [Yersinia bercovieri ATCC 43970] Length = 208 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VD---------GVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKIGVDKLREKL 186 >gi|218550896|ref|YP_002384687.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia fergusonii ATCC 35469] gi|218358437|emb|CAQ91084.1| GTP-binding protein [Escherichia fergusonii ATCC 35469] Length = 198 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 106/191 (55%), Gaps = 10/191 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 1 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K Sbjct: 61 GK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLK 111 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +DQ + + ++ ++LTK DKL+ + L + + + +V SS+K Sbjct: 112 DLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLK 170 Query: 196 RKGIEVLRKAI 206 ++G++ LR+ + Sbjct: 171 KQGVDKLRQKL 181 >gi|313887114|ref|ZP_07820810.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas asaccharolytica PR426713P-I] gi|332300425|ref|YP_004442346.1| GTP-binding protein engB [Porphyromonas asaccharolytica DSM 20707] gi|312923343|gb|EFR34156.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas asaccharolytica PR426713P-I] gi|332177488|gb|AEE13178.1| GTP-binding protein engB [Porphyromonas asaccharolytica DSM 20707] Length = 203 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 108/200 (54%), Gaps = 9/200 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F++ P + P++ PE AF GRSNVGKSSLIN+L K LA TS PG+TQ +N Sbjct: 4 HSATFVQSSPSVKSCPQSTLPEYAFIGRSNVGKSSLINMLTGHKGLAMTSQKPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + + LVD+PGYGYAR + + + LI +Y+++R L +++L+D Sbjct: 64 HFLINE---------SWHLVDLPGYGYARRSLEQREQFRKLIDQYVTKREALVNLFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID + + + +K + + IV TK DK+ ++ +E + + P + Sbjct: 115 IRHEPQRIDLEFINEMGEKGIPFSIVFTKADKIGKQVQRDAVEAYQSRLLEDWEELPPLF 174 Query: 190 PTSSVKRKGIEVLRKAILET 209 TS+ G + L I + Sbjct: 175 VTSASTGLGRDELLDYIEQL 194 >gi|172058153|ref|YP_001814613.1| ribosome biogenesis GTP-binding protein YsxC [Exiguobacterium sibiricum 255-15] gi|229807534|sp|B1YJV8|ENGB_EXIS2 RecName: Full=Probable GTP-binding protein EngB gi|171990674|gb|ACB61596.1| small GTP-binding protein [Exiguobacterium sibiricum 255-15] Length = 193 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+ PE+A +GRSNVGKSS IN LV RK LARTS+ PG+TQ LNFF Sbjct: 8 FITSGVNPEHYPEPLLPEVALAGRSNVGKSSFINKLVQRKALARTSSKPGKTQTLNFFNI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYGYA+ K ++WG ++ +Y + R L+ V LL+D RH Sbjct: 68 ND---------EVMFVDVPGYGYAKVSKTEREAWGKMMEKYFTTREILKGVVLLVDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ FL +S +V TK+DK+ + + K ++ IP SS Sbjct: 119 PSADDVIMYDFLKYYDLSVIVVATKLDKIKRGQRDKQIAAIKRKLQ--FDGQDTFIPFSS 176 Query: 194 VKRKGIEVLRKAILETI 210 +G++ +AI + Sbjct: 177 ETGEGVDAAWEAIYRHL 193 >gi|124005837|ref|ZP_01690675.1| GTP-binding protein [Microscilla marina ATCC 23134] gi|123988520|gb|EAY28161.1| GTP-binding protein [Microscilla marina ATCC 23134] Length = 200 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 105/197 (53%), Gaps = 9/197 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F++ + P PE AF GRSNVGKSSLIN L NRK+LA+TS PG+TQ +N Sbjct: 4 KSAEFIKSSTDYTQCPAVHQPEYAFIGRSNVGKSSLINKLTNRKSLAKTSQNPGKTQTIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ D LVD+PGYGYA+A K WG +I Y+ +R L +++LID Sbjct: 64 HFLINDR---------WHLVDLPGYGYAKASKTERKKWGKMINDYILKREVLLGIFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID + +L ++ V + +V TK DKLS + + + I P Sbjct: 115 ARHEPQKIDLEFLEWLGEERVPFTMVFTKSDKLSSNKLPQAIASYRKAILRTWEEMPTHF 174 Query: 190 PTSSVKRKGIEVLRKAI 206 TSSV G + + K I Sbjct: 175 VTSSVSGLGCDEILKFI 191 >gi|295135644|ref|YP_003586320.1| GTPase EngB [Zunongwangia profunda SM-A87] gi|294983659|gb|ADF54124.1| GTPase EngB [Zunongwangia profunda SM-A87] Length = 200 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ ++ P + PE AF GRSNVGKSSLIN+L RKNLA+TS PG+TQ +N Sbjct: 4 NTAEFVVSNSKVAKCPNSPLPEYAFIGRSNVGKSSLINMLTGRKNLAKTSAKPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYGYA+ K + I Y ER L C ++LID Sbjct: 64 HFLIN---------KNWHLVDLPGYGYAKVSKSAKKVFQKFITNYFEERKQLVCAFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + ID + +L + A+ + ++ TK DKL P ++ + + + P Sbjct: 115 SRHKPQPIDMEFMQWLGEHAIPFCMIFTKADKLKPKELEKNILNYQEEMLQVWEQMPHFF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS + G + + + I E +N Sbjct: 175 VTSSTAKTGSDDILEFI-ENLN 195 >gi|163802213|ref|ZP_02196108.1| GTP-binding protein [Vibrio sp. AND4] gi|159174018|gb|EDP58828.1| GTP-binding protein [Vibrio sp. AND4] Length = 223 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 76 QE---------GCHIVDLPGYGFAQVPIEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + V SS Sbjct: 127 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKVRKQAETF-GGDVSVDVFSS 185 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 186 LKGLGVDQLRAKL 198 >gi|123440425|ref|YP_001004419.1| ribosome biogenesis GTP-binding protein YsxC [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166232162|sp|A1JHT4|ENGB_YERE8 RecName: Full=Probable GTP-binding protein EngB gi|122087386|emb|CAL10167.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 217 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 10/200 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F+ P+I LP+ E+AF+GRSN GKSS +N L +K+LARTS PGRTQ Sbjct: 6 FNYHMTHFVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTGQKSLARTSKTPGRTQ 65 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F + + LVD+PGYGYA P++ W + YL +R+ L+ + + Sbjct: 66 LINLFEVVE---------GVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVV 116 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + ++ ++LTK DKL+ + L + I + Sbjct: 117 LMDIRHPLKDLDQQMITWAVAVGTPVMLLLTKADKLASGARKAQLNMVREAIIPF-MGDI 175 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 +V SS+K+ G++ LR+ + Sbjct: 176 QVEAFSSLKKIGVDKLREKL 195 >gi|325689772|gb|EGD31776.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK115] gi|325694580|gb|EGD36489.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK150] gi|325696428|gb|EGD38318.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus sanguinis SK160] Length = 195 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 78/196 (39%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYAR KK + WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYARVSKKEREKWGRMIEEYLTSRENLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYDIPVILVATKADKIPRGKWNKHESAIKKKLD--FDRNDDFILFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 TKDGLDASWDAILSKI 195 >gi|319939270|ref|ZP_08013633.1| GTPase [Streptococcus anginosus 1_2_62CV] gi|319811666|gb|EFW07942.1| GTPase [Streptococcus anginosus 1_2_62CV] Length = 195 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDEIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRENLRAVVSLVDFRHEP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESVIKKKLD--FDKNDDFIVFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE I Sbjct: 180 DKDGLDAAWDAILEKI 195 >gi|300714615|ref|YP_003739418.1| GTP-binding protein EngB [Erwinia billingiae Eb661] gi|299060451|emb|CAX57558.1| Probable GTP-binding protein EngB [Erwinia billingiae Eb661] Length = 214 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 102/189 (53%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADTGLEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFQV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 AE---------GYRLVDLPGYGYAEVPEEMKLKWQRALAEYLRDRQCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L + + + V SS Sbjct: 122 LKDLDQQMILWAVQSGIQVLVLLTKADKLASGARKAQLNAVRETAKGF-IGDVRVEMFSS 180 Query: 194 VKRKGIEVL 202 +K+ G++ L Sbjct: 181 LKKIGVDKL 189 >gi|325570036|ref|ZP_08145961.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus casseliflavus ATCC 12755] gi|325156864|gb|EGC69035.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus casseliflavus ATCC 12755] Length = 200 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 98/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ Sbjct: 15 VISAVSPAQYPDTPLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQTLNFYLI- 73 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + VD+PGYGYA+ K WG +I YL +R LR V L+D RH Sbjct: 74 --------ENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLEQREQLRAVVSLVDLRHAP 125 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + +V TK DK+ + K + P I SS+ Sbjct: 126 SQEDVQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESMIKKALSFDPA--DTFILFSSI 183 Query: 195 KRKGIEVLRKAILETI 210 ++G E KAI I Sbjct: 184 TKQGKEEAWKAIEAAI 199 >gi|197333942|ref|YP_002154844.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio fischeri MJ11] gi|238690290|sp|B5FFA6|ENGB_VIBFM RecName: Full=Probable GTP-binding protein EngB gi|197315432|gb|ACH64879.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio fischeri MJ11] Length = 215 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 108/196 (55%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 EENC---------HIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLQGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K IDQ + + + + QI+LTK DKL + + K + ++ EV SS Sbjct: 123 LKDIDQQLVFWAVDQNIPVQILLTKADKLKSGARKAQVLKVREAAVDF-GGEVEVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR + E Sbjct: 182 LKGIGVDKLRAKLDEW 197 >gi|39933708|ref|NP_945984.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris CGA009] gi|81564114|sp|Q6NC42|ENGB_RHOPA RecName: Full=Probable GTP-binding protein EngB gi|39647554|emb|CAE26075.1| possible GTPases [Rhodopseudomonas palustris CGA009] Length = 216 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 98/205 (47%), Positives = 119/205 (58%), Gaps = 7/205 (3%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 W F+ P I LP G EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ Sbjct: 16 MFAGDWHFIWASPSIETLPPMGSVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQ 75 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 L FF + LVDMPGYGYA A K V SW LI +L R+TL VY+ Sbjct: 76 ELIFFEGP-------PNAGLRLVDMPGYGYAAASKAKVASWTSLIHHFLQGRATLARVYV 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID RHG+K +D D+ LDK AVSYQIVLTK D++ E + T + +P A P Sbjct: 129 LIDGRHGLKDVDLDILKTLDKAAVSYQIVLTKADQVKAAELAERVTATVAALAKHPAAFP 188 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 EV+ TSS G+ LR A++ ++ Sbjct: 189 EVLTTSSRTGAGMPELRAAMIRLLD 213 >gi|192289065|ref|YP_001989670.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris TIE-1] gi|238692588|sp|B3QCI1|ENGB_RHOPT RecName: Full=Probable GTP-binding protein EngB gi|192282814|gb|ACE99194.1| GTP-binding protein HSR1-related [Rhodopseudomonas palustris TIE-1] Length = 216 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 98/205 (47%), Positives = 119/205 (58%), Gaps = 7/205 (3%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 W F+ P I LP G EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ Sbjct: 16 MFAGDWHFIWASPSIETLPPMGSVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQ 75 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 L FF + LVDMPGYGYA A K V SW LI +L R+TL VY+ Sbjct: 76 ELIFFEGP-------PNAGLRLVDMPGYGYAAASKAKVASWTSLIHHFLQGRATLARVYV 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID RHG+K +D D+ LDK AVSYQIVLTK D++ E + T + +P A P Sbjct: 129 LIDGRHGLKDVDLDILKTLDKAAVSYQIVLTKADQVKAAELAERVTATVAALAKHPAAFP 188 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 EV+ TSS G+ LR A++ ++ Sbjct: 189 EVLTTSSRTGAGMPELRAAMIRLLD 213 >gi|239827921|ref|YP_002950545.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. WCH70] gi|259645899|sp|C5D5L1|ENGB_GEOSW RecName: Full=Probable GTP-binding protein EngB gi|239808214|gb|ACS25279.1| small GTP-binding protein [Geobacillus sp. WCH70] Length = 193 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 102/194 (52%), Gaps = 11/194 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + P PE A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ + Sbjct: 11 SAVKPEQYPDGALPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYLINE- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + VD+PGYG+AR KK ++WG ++ Y + R LR V L++D RH + Sbjct: 70 --------SFYFVDVPGYGFARVSKKEREAWGKMMETYFTTREQLRAVVLIVDLRHPPTK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++ FL + I+ TK DK+ Q+ L+ + + ++I S+ Sbjct: 122 DDVMMYEFLKHYQIPTIIIATKADKVPKGKWQKHLKVVRETLNI--IEDDKLILFSAETG 179 Query: 197 KGIEVLRKAILETI 210 +G E A+ + Sbjct: 180 QGKEEAWAALERFL 193 >gi|238794562|ref|ZP_04638170.1| GTP-binding protein engB [Yersinia intermedia ATCC 29909] gi|238726142|gb|EEQ17688.1| GTP-binding protein engB [Yersinia intermedia ATCC 29909] Length = 207 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VD---------GIRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G+E LR+ + Sbjct: 174 LKKIGVEKLREKL 186 >gi|171778306|ref|ZP_02919512.1| hypothetical protein STRINF_00354 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171283006|gb|EDT48430.1| hypothetical protein STRINF_00354 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 203 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 97/196 (49%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PE+A +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ Sbjct: 19 LLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNID 78 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL R LR V L+D RH Sbjct: 79 D---------KLRFVDVPGYGYAKVSKAERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDP 129 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + SSV Sbjct: 130 SADDIQMYEFLKYYEIPVIVVATKADKIPHGKWNKHESAIKKKLN--FDKSDKFVVFSSV 187 Query: 195 KRKGIEVLRKAILETI 210 R G++ +ILE + Sbjct: 188 DRTGLDEAWDSILEEL 203 >gi|81247620|gb|ABB68328.1| conserved hypothetical protein [Shigella boydii Sb227] Length = 199 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 107/192 (55%), Gaps = 10/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 1 MMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVA 60 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH + Sbjct: 61 DGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRHSLQGLVVLMDIRHPL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K +DQ + + ++ ++LTK DKL+ + L + + + +V SS+ Sbjct: 112 KDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVETFSSL 170 Query: 195 KRKGIEVLRKAI 206 K++G++ LR+ + Sbjct: 171 KKQGVDKLRQKL 182 >gi|86146594|ref|ZP_01064916.1| GTP-binding protein [Vibrio sp. MED222] gi|85835651|gb|EAQ53787.1| GTP-binding protein [Vibrio sp. MED222] Length = 219 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSALNRVTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL R +L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQRRESLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + L K + +++ V SS Sbjct: 123 MKDLDQQMIYWAIDSRIPVQVLLTKADKLKSGARKAQLLKIRNDAKSF-GGDVAVDVFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR + E Sbjct: 182 MKGIGVDQLRAKMDEW 197 >gi|296876432|ref|ZP_06900484.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis ATCC 15912] gi|296432722|gb|EFH18517.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus parasanguinis ATCC 15912] Length = 200 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 80/194 (41%), Positives = 101/194 (52%), Gaps = 11/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PE+A +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDEIPEVALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + LVD+PGYGYAR KK + WG +I YL+ R L+ V L+D RH Sbjct: 71 D---------KLRLVDVPGYGYARVSKKEREKWGRMIEEYLTSRKNLKAVVSLVDFRHEP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + P I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVILVATKADKIPRGKWNKHESIIKKKLDFDPA--DTFIVFSSV 179 Query: 195 KRKGIEVLRKAILE 208 R+G+E AILE Sbjct: 180 TREGLEKSWDAILE 193 >gi|322835074|ref|YP_004215101.1| ribosome biogenesis GTP-binding protein YsxC [Rahnella sp. Y9602] gi|321170275|gb|ADW75974.1| ribosome biogenesis GTP-binding protein YsxC [Rahnella sp. Y9602] Length = 216 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 109/206 (52%), Gaps = 11/206 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M S T + F+ P+I LP E+AF+GRSN GKSS +N L +K+LARTS Sbjct: 1 MTSQT-YNYHMTHFVMSAPDIRHLPSDAGIEVAFAGRSNAGKSSALNTLTQQKSLARTSK 59 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ +N F K P + LVD+PGYGYA P++ W + YL R++ Sbjct: 60 TPGRTQLINLFEVK---------PGIRLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNS 110 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ + +L+D RH +K +DQ + + ++LTK DKL+ Q ++ + ++ Sbjct: 111 LKGLVVLMDIRHPLKDLDQQMIQWAVDVGTPVMLLLTKADKLASGARQAQIKMVREAVKE 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V SS K+ G++ L + Sbjct: 171 F-MGDIQVEAFSSPKKMGVDKLSDKL 195 >gi|293391510|ref|ZP_06635844.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952044|gb|EFE02163.1| GTP-binding protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 204 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S+ FL P + LP+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSYIKLNYHKTHFLTSSPNLKSLPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPQCKLVDLPGYGYAAVPEQMKLQWQQALGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGIVILMDIRHPLKDLDQQMIKWAVASQLPVLLLLTKADKLSQSERSKQMKIVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S++KR GI+ L + Sbjct: 172 RGE-IQVEAFSALKRTGIDRLAATL 195 >gi|301169860|emb|CBW29464.1| GTP-binding protein [Haemophilus influenzae 10810] Length = 205 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGLVVLMDIRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSVRSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S+ + GI+ L + Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKLAAKL 195 >gi|315645734|ref|ZP_07898858.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus vortex V453] gi|315279212|gb|EFU42522.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus vortex V453] Length = 214 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 102/198 (51%), Gaps = 11/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+ PEIA +GRSNVGKSSLIN ++ RKNLARTS+ PG+TQ LN++ Sbjct: 8 FVISAVVPAQYPEDALPEIALAGRSNVGKSSLINRMIARKNLARTSSTPGKTQQLNYYRV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD PGYGYA+ K ++G +I RYL R L+ V L++D RH Sbjct: 68 ND---------DLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLNREELKLVLLIVDMRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ +L +V TK DK+ T Q+ ++ K + P + + SS Sbjct: 119 PSKDDISMYEWLQHYNRPVCVVATKADKIPKTRRQKHVKIVKDTLGFKP--YHSFVMFSS 176 Query: 194 VKRKGIEVLRKAILETIN 211 G + L + + Sbjct: 177 ELGLGKDELWAIMESHMG 194 >gi|257865955|ref|ZP_05645608.1| GTP-binding protein [Enterococcus casseliflavus EC30] gi|257872288|ref|ZP_05651941.1| GTP-binding protein [Enterococcus casseliflavus EC10] gi|257875582|ref|ZP_05655235.1| GTP-binding protein [Enterococcus casseliflavus EC20] gi|257799889|gb|EEV28941.1| GTP-binding protein [Enterococcus casseliflavus EC30] gi|257806452|gb|EEV35274.1| GTP-binding protein [Enterococcus casseliflavus EC10] gi|257809748|gb|EEV38568.1| GTP-binding protein [Enterococcus casseliflavus EC20] Length = 194 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 98/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVSPAQYPATPLPEIALAGRSNVGKSSFINTLINRKNLARTSSKPGKTQTLNFYLI- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + VD+PGYGYA+ K WG +I YL +R LR V L+D RH Sbjct: 68 --------ENTLHFVDVPGYGYAKVSKTERAKWGKMIETYLEQREQLRAVVSLVDLRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + +V TK DK+ + K + P I SS+ Sbjct: 120 SQEDIQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESMIKKALSFDPA--DTFILFSSI 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E KAI I Sbjct: 178 TKQGKEEAWKAIEAAI 193 >gi|302381827|ref|YP_003817650.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas subvibrioides ATCC 15264] gi|302192455|gb|ADL00027.1| ribosome biogenesis GTP-binding protein YsxC [Brevundimonas subvibrioides ATCC 15264] Length = 213 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 94/208 (45%), Positives = 116/208 (55%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F + A F+ G +I LP+ PEIAF+GRSNVGKSSLIN LV LAR SN Sbjct: 11 AARVLFARPA-TFVMGAAKIEQLPEPDLPEIAFAGRSNVGKSSLINGLVGMHKLARASNE 69 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+ +NFF + LVD+PGYG+A+A K V + L YL R TL Sbjct: 70 PGRTREVNFFDLD---------AKLRLVDLPGYGWAKASKSTVRQFQNLGRDYLRGRVTL 120 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + VYLLID RHG+K +D + LD AVSYQIVLTK DK+ T I Sbjct: 121 KRVYLLIDARHGLKSVDTEALDALDLAAVSYQIVLTKADKIKAHERDTVQAATLKAISKR 180 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 P A P V TS+ K G+ LR I+ T Sbjct: 181 PAAFPAVAVTSAEKGLGLPELRAEIMRT 208 >gi|258626623|ref|ZP_05721453.1| GTP-binding protein [Vibrio mimicus VM603] gi|258581127|gb|EEW06046.1| GTP-binding protein [Vibrio mimicus VM603] Length = 219 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 AE---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREDAKQF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + + Sbjct: 182 LSGIGVDTLRAKLDQW 197 >gi|261496003|ref|ZP_05992413.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308253|gb|EEY09546.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] Length = 203 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N Sbjct: 6 HKTHFLTSAPDIRHLPEDTGVEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F LVD+PGYGYA P++ W + YL +R L V +L+D Sbjct: 66 LFEV---------ETNCKLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRECLGGVVILMD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + ++LTK DKLS + + ++ + I + +V Sbjct: 117 IRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKMVREAILPFQ-GDIQVE 175 Query: 190 PTSSVKRKGIEVLRKAILET 209 S++ + GI+ L + Sbjct: 176 AYSALNKIGIDKLSNKLDSW 195 >gi|167748794|ref|ZP_02420921.1| hypothetical protein ANACAC_03568 [Anaerostipes caccae DSM 14662] gi|167651764|gb|EDR95893.1| hypothetical protein ANACAC_03568 [Anaerostipes caccae DSM 14662] Length = 204 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +N++ + Sbjct: 16 SKLPDNELPEVAFAGKSNVGKSSLINALMNRKSYARVSAQPGKTQTINYYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA+ + + WG +I RYL L+ V+LLID RH + D + Sbjct: 70 ---ELYYVDLPGYGYAKVTESVKEQWGAMIERYLHTSKQLKLVFLLIDIRHKPSKNDVMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK DKL + + +++ + +R V P SS+ ++G + Sbjct: 127 YDWIVHNGYHPVIIATKSDKLKRSQLPKHVKEIRQELR--LNKETPVFPFSSLSKQGRDE 184 Query: 202 LRKAILETI 210 + I + + Sbjct: 185 IWDFIEQVL 193 >gi|28896883|ref|NP_796488.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus RIMD 2210633] gi|153838823|ref|ZP_01991490.1| GTP-binding protein [Vibrio parahaemolyticus AQ3810] gi|260365930|ref|ZP_05778424.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus K5030] gi|260877782|ref|ZP_05890137.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus AN-5034] gi|260895568|ref|ZP_05904064.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus Peru-466] gi|260902593|ref|ZP_05910988.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus AQ4037] gi|31340058|sp|Q87TG0|ENGB_VIBPA RecName: Full=Probable GTP-binding protein EngB gi|28805091|dbj|BAC58372.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149747753|gb|EDM58649.1| GTP-binding protein [Vibrio parahaemolyticus AQ3810] gi|308088574|gb|EFO38269.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus Peru-466] gi|308089816|gb|EFO39511.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus AN-5034] gi|308109669|gb|EFO47209.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus AQ4037] gi|308113473|gb|EFO51013.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio parahaemolyticus K5030] gi|328471657|gb|EGF42534.1| GTP-binding protein YsxC [Vibrio parahaemolyticus 10329] Length = 219 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGVEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ +VD+PGYG+A+ P + + W + YL +R L+ + +L+D RH Sbjct: 72 EE---------GCHIVDLPGYGFAQVPVEMKNKWQKSLGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL ++TL K + + + V SS Sbjct: 123 MKDLDQQMIFWAIDSRIPVQVLLTKADKLKSGARKQTLLKIRKQVETF-GGDVSVDVFSS 181 Query: 194 VKRKGIEVLRKAI 206 +K G++ LR + Sbjct: 182 LKGLGVDQLRAKL 194 >gi|145636430|ref|ZP_01792098.1| GTP-binding protein [Haemophilus influenzae PittHH] gi|145270255|gb|EDK10190.1| GTP-binding protein [Haemophilus influenzae PittHH] Length = 205 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGLVVLMDIRHPLKDLDQQMIEWAVSADLPVLLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S+ + GI+ L + Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKLAAKL 195 >gi|317470367|ref|ZP_07929758.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes sp. 3_2_56FAA] gi|316902171|gb|EFV24094.1| ribosome biogenesis GTP-binding protein YsxC [Anaerostipes sp. 3_2_56FAA] Length = 204 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +N++ + Sbjct: 16 SKLPDNEFPEVAFAGKSNVGKSSLINALMNRKSYARVSAQPGKTQTINYYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA+ + + WG +I RYL L+ V+LLID RH + D + Sbjct: 70 ---ELYYVDLPGYGYAKVTESVKEQWGAMIERYLHTSKQLKLVFLLIDIRHKPSKNDVMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK DKL + + +++ + +R V P SS+ ++G + Sbjct: 127 YDWIVHNGYHPVIIATKSDKLKRSQLPKHVKEIRQELR--LNKETPVFPFSSLSKQGRDE 184 Query: 202 LRKAILETI 210 + I + + Sbjct: 185 IWDFIEQVL 193 >gi|78221686|ref|YP_383433.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter metallireducens GS-15] gi|119369199|sp|Q39YG6|ENGB_GEOMG RecName: Full=Probable GTP-binding protein EngB gi|78192941|gb|ABB30708.1| GTP-binding protein [Geobacter metallireducens GS-15] Length = 204 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 12/198 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S+ F+ P PE+AF+GRSNVGKSSLIN+LVNRK L RTS+ PGRTQ +N Sbjct: 4 SSAEFVTSGTRPAHYPPPELPEVAFAGRSNVGKSSLINVLVNRKGLVRTSSTPGRTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ LVD+PGYG+A+ P WG ++ YLS R L CV L++D Sbjct: 64 FFRVN---------GSLMLVDLPGYGFAKVPLAVKKEWGPMVETYLSTRPNLSCVVLIVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R + DQ + +L V+ +V+TK DK+S + R A E+ Sbjct: 115 IRREPTEEDQLMLQWLRAYNVAVLVVVTKCDKVSKNERAKQAAII---TRTLGLARDEMA 171 Query: 190 PTSSVKRKGIEVLRKAIL 207 S++ ++G + + I Sbjct: 172 FFSALSKEGRDEVWARIE 189 >gi|218130918|ref|ZP_03459722.1| hypothetical protein BACEGG_02519 [Bacteroides eggerthii DSM 20697] gi|317476229|ref|ZP_07935480.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides eggerthii 1_2_48FAA] gi|217987262|gb|EEC53593.1| hypothetical protein BACEGG_02519 [Bacteroides eggerthii DSM 20697] gi|316907640|gb|EFV29343.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides eggerthii 1_2_48FAA] Length = 202 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 96/201 (47%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N Sbjct: 5 SAEFVISNTDVNKCPGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ +VD+PGYGYAR +K + +I Y+ +R + +++L+D Sbjct: 65 FLIN---------KNWYIVDLPGYGYARRGQKGQEQIQRIIETYILQREQMTSLFVLVDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + ID +L + V + IV TK DKL + + P Sbjct: 116 RHEPQAIDLSFIEWLGENGVPFAIVFTKADKLKGGKINSNIRHYLEKLHEQWEELPPYFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 TSS R G E L I E IN Sbjct: 176 TSSENRMGREELLNYI-EQIN 195 >gi|300771784|ref|ZP_07081655.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobacterium spiritivorum ATCC 33861] gi|300761170|gb|EFK57995.1| ribosome biogenesis GTP-binding protein YsxC [Sphingobacterium spiritivorum ATCC 33861] Length = 207 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 106/202 (52%), Gaps = 13/202 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + LP PE AF GRSNVGKSSLIN + N+K LA+TS PG+TQ +N Sbjct: 4 KKAEFVCSNTRVDKLPDPTLPEYAFIGRSNVGKSSLINAMTNKKGLAKTSQKPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ D LVD+PGYG+A+ K N W I RYL+ R L+CV++LID Sbjct: 64 HFIIND---------EWFLVDLPGYGFAQTSKTNRSEWQKFIRRYLTHRDNLQCVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID D +L + + + ++ TK DK S + + K + + + P Sbjct: 115 SRHEPQKIDLDFCCWLGECGLPFMLIFTKADKQSAVKSDVNIAKFRKSLLQWFEEVPPHF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TS+ + G E ILE IN Sbjct: 175 LTSAETKTGCEP----ILEMIN 192 >gi|110835513|ref|YP_694372.1| GTP-binding protein [Alcanivorax borkumensis SK2] gi|119368787|sp|Q0VL48|ENGB_ALCBS RecName: Full=Probable GTP-binding protein EngB gi|110648624|emb|CAL18100.1| GTP-binding protein [Alcanivorax borkumensis SK2] Length = 208 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 10/199 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ + P E+AF+GRSN GKSS IN L +++LARTS PGRTQ LNFF Sbjct: 14 LFLQSAQRLDQCPPDEGREVAFAGRSNAGKSSAINRLTGQRSLARTSKTPGRTQLLNFFQ 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ K + W + YLSER L + L++D RH Sbjct: 74 LDEER---------RLVDLPGYGYAKVSKSKRNEWQEHLDHYLSERQALVGLVLMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +K D + + + + I++TK DKL A+ TL + + ++ +P + S Sbjct: 125 PLKDFDLMMLEWSAQANMPIHILMTKADKLKFGAAKSTLLQVQKQLKEHPAPL-SLQLFS 183 Query: 193 SVKRKGIEVLRKAILETIN 211 + G + + E + Sbjct: 184 ATNGTGCDEAWDKLGEWLG 202 >gi|261405364|ref|YP_003241605.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. Y412MC10] gi|261281827|gb|ACX63798.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. Y412MC10] Length = 214 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 102/201 (50%), Gaps = 11/201 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ P+ PEIA +GRSNVGKSSLIN +++RKNLARTS PG+TQ LN+ Sbjct: 5 KAEFVISAVVPAQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSATPGKTQQLNY 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + D + LVD PGYGYA+ K ++G +I RYL R L+ V L++D Sbjct: 65 YRVND---------DLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLSREELKLVLLIVDM 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D ++ +L +V TK DK+ T Q+ ++ K + P + + Sbjct: 116 RHPPSKDDISMYEWLQHYNRPVCVVATKADKIPKTRRQKHVKIVKETLGFKP--YHSFVM 173 Query: 191 TSSVKRKGIEVLRKAILETIN 211 SS G + L + + Sbjct: 174 FSSELGLGKDELWAIMESHMG 194 >gi|238750768|ref|ZP_04612266.1| GTP-binding protein engB [Yersinia rohdei ATCC 43380] gi|238710912|gb|EEQ03132.1| GTP-binding protein engB [Yersinia rohdei ATCC 43380] Length = 207 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VE---------GVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKIGVDKLREKL 186 >gi|114797282|ref|YP_759145.1| ribosome biogenesis GTP-binding protein YsxC [Hyphomonas neptunium ATCC 15444] gi|119369205|sp|Q0C548|ENGB_HYPNA RecName: Full=Probable GTP-binding protein EngB gi|114737456|gb|ABI75581.1| GTP-binding protein [Hyphomonas neptunium ATCC 15444] Length = 220 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 83/203 (40%), Positives = 113/203 (55%), Gaps = 8/203 (3%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + F+ GV + LP A E+ F+GRSNVGKSSLIN L R LAR+S PGRT Sbjct: 19 LLFAGKAEFVMGVVSLSGLPPADRSEVCFAGRSNVGKSSLINALTGRAKLARSSAEPGRT 78 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + LN+F D + LVD+PG+GYA+ K +W LI YL R +LR V+ Sbjct: 79 RELNYFDIGD-------EGKLYLVDLPGFGYAKVSKTQTAAWTKLIKSYLRGRPSLRRVF 131 Query: 126 LLIDCRHG-VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 LL+D R G + D++V +D AV+YQ+VLTK+DK+ ++ + K ++ A Sbjct: 132 LLVDARRGDLMDTDEEVMDLMDGAAVTYQVVLTKVDKVPKGEVEKIVVKIADKLKKRGAA 191 Query: 185 HPEVIPTSSVKRKGIEVLRKAIL 207 HP V TS+ K GI LR I Sbjct: 192 HPVVRMTSAEKGFGIPELRAEIA 214 >gi|205354414|ref|YP_002228215.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859194|ref|YP_002245845.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205274195|emb|CAR39213.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710997|emb|CAR35365.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 199 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 107/195 (54%), Gaps = 10/195 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 1 MMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVV 60 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH + Sbjct: 61 EGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K +DQ + + + + ++LTK DKL+ + L + + + +V SS+ Sbjct: 112 KDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSSL 170 Query: 195 KRKGIEVLRKAILET 209 K++G++ LR+ + Sbjct: 171 KKQGVDKLRQKLDSW 185 >gi|258623133|ref|ZP_05718145.1| GTP-binding protein [Vibrio mimicus VM573] gi|258584616|gb|EEW09353.1| GTP-binding protein [Vibrio mimicus VM573] Length = 220 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 AE---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREDAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|238759873|ref|ZP_04621029.1| GTP-binding protein engB [Yersinia aldovae ATCC 35236] gi|238701934|gb|EEP94495.1| GTP-binding protein engB [Yersinia aldovae ATCC 35236] Length = 207 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VD---------GIRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 K+ G++ LR+ + Sbjct: 174 PKKIGVDKLREKL 186 >gi|319776639|ref|YP_004139127.1| GTP-binding protein [Haemophilus influenzae F3047] gi|317451230|emb|CBY87463.1| GTP-binding protein [Haemophilus influenzae F3047] Length = 205 Score = 231 bits (591), Expect = 3e-59, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNYKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGLVVLMDIRHPLKDLDQQMIEWAVSANLPILLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S+ + GI+ L + Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKLAAKL 195 >gi|110807451|ref|YP_690971.1| ribosome biogenesis GTP-binding protein YsxC [Shigella flexneri 5 str. 8401] gi|30043106|gb|AAP18828.1| hypothetical protein S3811 [Shigella flexneri 2a str. 2457T] gi|56384010|gb|AAN45370.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|110616999|gb|ABF05666.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|332751660|gb|EGJ82059.1| hypothetical protein SF434370_3790 [Shigella flexneri 4343-70] Length = 198 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 68/191 (35%), Positives = 106/191 (55%), Gaps = 10/191 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D Sbjct: 1 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAD 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K Sbjct: 61 GK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLK 111 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +DQ + + ++ ++LTK DKL+ + L + + + +V SS+K Sbjct: 112 DLDQQMIEWAVDSNIAVLVLLTKADKLASGARKALLNMVREAVLAF-NGDVQVETFSSLK 170 Query: 196 RKGIEVLRKAI 206 ++G++ LR+ + Sbjct: 171 KQGVDKLRQKL 181 >gi|238764291|ref|ZP_04625242.1| GTP-binding protein engB [Yersinia kristensenii ATCC 33638] gi|238697442|gb|EEP90208.1| GTP-binding protein engB [Yersinia kristensenii ATCC 33638] Length = 204 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VD---------GIRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVMLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKIGVDKLREKL 186 >gi|329924530|ref|ZP_08279592.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. HGF5] gi|328940609|gb|EGG36929.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. HGF5] Length = 214 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 102/201 (50%), Gaps = 11/201 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ P+ PEIA +GRSNVGKSSLIN +++RKNLARTS PG+TQ LN+ Sbjct: 5 KAEFVISAVVPAQYPEDALPEIALAGRSNVGKSSLINRMISRKNLARTSATPGKTQQLNY 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + D + LVD PGYGYA+ K ++G +I RYL R L+ V L++D Sbjct: 65 YRVND---------DLYLVDFPGYGYAKVSKTQRAAFGEMIERYLLSREELKLVLLIVDM 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D ++ +L +V TK DK+ T Q+ ++ K + P + + Sbjct: 116 RHPPSKDDISMYEWLQHYNRPVCVVATKADKIPKTRRQKHVKIVKETLGFKP--YHSFVM 173 Query: 191 TSSVKRKGIEVLRKAILETIN 211 SS G + L + + Sbjct: 174 FSSELGLGKDELWAIMESHMG 194 >gi|320546907|ref|ZP_08041209.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equinus ATCC 9812] gi|320448425|gb|EFW89166.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus equinus ATCC 9812] Length = 197 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ Sbjct: 13 LLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNID 72 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL R LR V L+D RH Sbjct: 73 D---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDP 123 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + N+ +I SSV Sbjct: 124 SADDIQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESAIKKKL-NFDKTDKFII-FSSV 181 Query: 195 KRKGIEVLRKAILETI 210 R G++ +ILE + Sbjct: 182 DRTGLDESWDSILEEL 197 >gi|316932099|ref|YP_004107081.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris DX-1] gi|315599813|gb|ADU42348.1| ribosome biogenesis GTP-binding protein YsxC [Rhodopseudomonas palustris DX-1] Length = 216 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 98/205 (47%), Positives = 119/205 (58%), Gaps = 7/205 (3%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 W F+ P I LP G EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ Sbjct: 16 MFAGDWHFIWASPSIETLPPMGSVEIAFAGRSNVGKSSLINALTGRNALARTSHTPGRTQ 75 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 L FF + LVDMPGYGYA A K V SW LI +L R+TL VY+ Sbjct: 76 ELIFFEGP-------PNAGLRLVDMPGYGYAAASKAKVASWTSLIHHFLQGRATLARVYV 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID RHG+K +D D+ LDK AVSYQIVLTK D++ E + T + +P A P Sbjct: 129 LIDGRHGLKDVDLDILKTLDKAAVSYQIVLTKADQVKAAELSERVTATVAALTKHPAAFP 188 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 EV+ TSS G+ LR A++ ++ Sbjct: 189 EVLTTSSRTGAGMPELRAAMIRLLD 213 >gi|319408961|emb|CBI82618.1| GTP-binding protein [Bartonella schoenbuchensis R1] Length = 181 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 98/168 (58%), Positives = 121/168 (72%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 WIF+R VP I LP GPPEIAF GRSNVGKSSLIN LV +K LARTSN PGRTQ LN+ Sbjct: 14 NWIFIRSVPTIQCLPPEGPPEIAFVGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNY 73 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+P++ S+ K + P +ALVDMPGYG+A+AP +++W LI YL R+TL+ Y+LID Sbjct: 74 FIPENLSDQKEDFPPIALVDMPGYGFAKAPPSCIEAWTRLIFDYLRGRTTLKRAYVLIDS 133 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 RHG+K+ D DV LDK AVSYQIVLTK DK+ P + + TK + Sbjct: 134 RHGIKKNDTDVLDLLDKAAVSYQIVLTKSDKIKPNALETLVTATKKIF 181 >gi|261494156|ref|ZP_05990659.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310322|gb|EEY11522.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 203 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N Sbjct: 6 HKTHFLTSAPDICHLPEDTGVEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F LVD+PGYGYA P++ W + YL +R L V +L+D Sbjct: 66 LFEV---------ETNCKLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRECLGGVVILMD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + ++LTK DKLS + + ++ + I + +V Sbjct: 117 IRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKMVREAILPFQ-GDIQVE 175 Query: 190 PTSSVKRKGIEVLRKAILET 209 S++ + GI+ L + Sbjct: 176 AYSALNKIGIDKLSNKLDSW 195 >gi|319897413|ref|YP_004135610.1| gtp-binding protein [Haemophilus influenzae F3031] gi|309751235|gb|ADO81219.1| GTP-binding protein YihA [Haemophilus influenzae R2866] gi|317432919|emb|CBY81285.1| GTP-binding protein [Haemophilus influenzae F3031] Length = 205 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGLVVLMDIRHPLKDLDQQMIEWAVSANLPILLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S+ + GI+ L + Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKLAAKL 195 >gi|332518992|ref|ZP_08395459.1| ribosome biogenesis GTP-binding protein YsxC [Lacinutrix algicola 5H-3-7-4] gi|332044840|gb|EGI81033.1| ribosome biogenesis GTP-binding protein YsxC [Lacinutrix algicola 5H-3-7-4] Length = 206 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 9/200 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ E+ PK PE AF GRSNVGKSSLIN+L +RK+LA+TS PG+TQ +N Sbjct: 4 KSAEFVISNSEVSKCPKDMLPEYAFIGRSNVGKSSLINMLTSRKSLAKTSGRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYGYAR K + I +Y +R L C ++L+D Sbjct: 64 HFIIN---------KEWYLVDLPGYGYARVSKSTKKVFQKFITKYFEQREQLVCAFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + ID + +L + + + I+ TK DKL P +E + ++ P+ Sbjct: 115 IRHKPQPIDLEFMQYLGEGGIPFCIIFTKADKLKPNAITRHVEDYRKIMLETWEEMPQHF 174 Query: 190 PTSSVKRKGIEVLRKAILET 209 TSS K G + + I E Sbjct: 175 ITSSSKDIGKDDVLNFIGEL 194 >gi|288925742|ref|ZP_06419673.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae D17] gi|315608306|ref|ZP_07883295.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae ATCC 33574] gi|288337397|gb|EFC75752.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae D17] gi|315249936|gb|EFU29936.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccae ATCC 33574] Length = 202 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 103/199 (51%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ P + + PK E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N Sbjct: 4 KKSEFIISAPRVSMCPKDDRLEYAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A+ K + +I Y+ +R L V++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGFAKRSKTVLKQLEQMIAGYILQRKQLANVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R ++ID++ +L + V + IV TK DKL P A+ + +++ P Sbjct: 115 IRLDPQKIDREFIDWLGESNVPFAIVFTKADKLGPVKAKANAARWMTSLQDRWEELPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TS+ KR G E L I E Sbjct: 175 ITSAEKRTGREELLDYIDE 193 >gi|238790751|ref|ZP_04634511.1| GTP-binding protein engB [Yersinia frederiksenii ATCC 33641] gi|238721149|gb|EEQ12829.1| GTP-binding protein engB [Yersinia frederiksenii ATCC 33641] Length = 207 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 108/193 (55%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 FVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA P++ W + YL +R+ L+ + +L+D RH Sbjct: 64 VE---------GVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + ++ ++LTK DKL+ + L + I + +V SS Sbjct: 115 LKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNMVREAIIPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ LR+ + Sbjct: 174 LKKIGVDKLREKL 186 >gi|114569008|ref|YP_755688.1| ribosome biogenesis GTP-binding protein YsxC [Maricaulis maris MCS10] gi|119369211|sp|Q0ASI7|ENGB_MARMM RecName: Full=Probable GTP-binding protein EngB gi|114339470|gb|ABI64750.1| GTP-binding protein [Maricaulis maris MCS10] Length = 191 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 116/195 (59%), Gaps = 8/195 (4%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 G + LP+ E+AF+GRSNVGKSSLIN L N+K LAR S PGRT+ LNFF Sbjct: 1 MGAVALDHLPEPDRLEVAFAGRSNVGKSSLINALTNQKGLARASGEPGRTRELNFFNV-- 58 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + +VD+PGYGYA+APK V+ W L +L R L+ VYLLID RHG+K Sbjct: 59 ------EGGDLRIVDLPGYGYAKAPKPVVEKWTRLTKAFLRGRVNLKRVYLLIDSRHGLK 112 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +D + D+ AVSYQ+VLTK DK+ P + + +T I P A P VI TSS K Sbjct: 113 DVDLKIMDVFDEAAVSYQVVLTKTDKIKPPAVKRLIGETGEKIARRPAAFPRVIATSSAK 172 Query: 196 RKGIEVLRKAILETI 210 + G++ LR I+ + Sbjct: 173 QDGVDQLRAEIVALL 187 >gi|253987784|ref|YP_003039140.1| ribosome biogenesis GTP-binding protein YsxC [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638662|emb|CAR67281.1| probable gtp-binding protein engb [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779234|emb|CAQ82394.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 246 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 110/205 (53%), Gaps = 10/205 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ P+I LP+ E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ Sbjct: 44 YNYHMTRFITSAPDIRHLPQDVGIEVAFAGRSNAGKSSALNALTNQKNLARTSKTPGRTQ 103 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F ++ + LVD+PGYGYA P++ W + YL +R L + + Sbjct: 104 LINLFEVEE---------GIRLVDLPGYGYAEVPEEIKRKWQKALGEYLQKRECLLGLVV 154 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + + V ++LTK DKL+ + + L K + + N Sbjct: 155 LMDIRHPLKDLDQQMIQWAVTMNVPIMVLLTKADKLTSSARKSQLIKIRGELANL-NGDI 213 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 +V S++K+ GI+ L+ + N Sbjct: 214 QVEYFSALKKIGIDKLQHKLDIWFN 238 >gi|227551677|ref|ZP_03981726.1| GTPase [Enterococcus faecium TX1330] gi|257895723|ref|ZP_05675376.1| GTP-binding protein [Enterococcus faecium Com12] gi|293377668|ref|ZP_06623857.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium PC4.1] gi|293571861|ref|ZP_06682877.1| GTP-binding protein [Enterococcus faecium E980] gi|227179240|gb|EEI60212.1| GTPase [Enterococcus faecium TX1330] gi|257832288|gb|EEV58709.1| GTP-binding protein [Enterococcus faecium Com12] gi|291608115|gb|EFF37421.1| GTP-binding protein [Enterococcus faecium E980] gi|292643668|gb|EFF61789.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium PC4.1] Length = 195 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PEIA +GRSNVGKSS IN L++RKNLARTS PG+TQ LNF++ Sbjct: 9 IISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQTLNFYLI- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 A+ VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 68 --------ENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + +V TK DK+ + + K + + I SSV Sbjct: 120 SQEDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKALD--FDHNDTFILFSSV 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E AI + I Sbjct: 178 TKQGKEEAWAAIEQAI 193 >gi|329955112|ref|ZP_08296093.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides clarus YIT 12056] gi|328526402|gb|EGF53417.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides clarus YIT 12056] Length = 202 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ Sbjct: 8 FVISNTDVTKCPGGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ +K + +I Y+ +R + +++L+D RH Sbjct: 68 N---------KSWYIVDLPGYGYAKRGQKGQEQIQRIIETYILQREQMTNLFVLVDSRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ID +L + V + IV TK DKL + + P TSS Sbjct: 119 PQAIDLAFIEWLGENGVPFAIVFTKADKLKGGRINSNIRHYLEKLHEQWEELPPYFVTSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 R G + L I E IN Sbjct: 179 ENRMGRDELLGYI-EQIN 195 >gi|147674030|ref|YP_001218307.1| ribosome biogenesis GTP-binding protein YsxC [Vibrio cholerae O395] gi|262167044|ref|ZP_06034761.1| GTP-binding protein EngB [Vibrio cholerae RC27] gi|172047517|sp|A5F4I0|ENGB_VIBC3 RecName: Full=Probable GTP-binding protein EngB gi|146315913|gb|ABQ20452.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227011887|gb|ACP08097.1| putative GTP-binding protein engB [Vibrio cholerae O395] gi|262024562|gb|EEY43246.1| GTP-binding protein EngB [Vibrio cholerae RC27] Length = 220 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNTGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AD---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|297581847|ref|ZP_06943768.1| GTPase EngB [Vibrio cholerae RC385] gi|297533941|gb|EFH72781.1| GTPase EngB [Vibrio cholerae RC385] Length = 220 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AD---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECEIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|290477053|ref|YP_003469965.1| putative GTPase with nucleoside triP hydrolase domain, involved in coordination of cell cycle [Xenorhabdus bovienii SS-2004] gi|289176398|emb|CBJ83205.1| putative GTPase with nucleoside triP hydrolase domain, involved in coordination of cell cycle [Xenorhabdus bovienii SS-2004] Length = 207 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPQDVGIEVAFAGRSNAGKSSALNALTKQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D + LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 ED---------GIRLVDLPGYGYAEVPEEMKRKWQNALGEYLQKRECLLGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + V ++LTK DKL+ + L K + + + ++ S+ Sbjct: 124 LKDLDMQMIEWAVVMQVPVMVLLTKADKLASGARKSQLAKVRQELTSL-GGEIQIENFSA 182 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ GI+ L + + N Sbjct: 183 LKKIGIDQLEQKLDYWFN 200 >gi|312882609|ref|ZP_07742348.1| putative GTP-binding protein EngB [Vibrio caribbenthicus ATCC BAA-2122] gi|309369694|gb|EFP97207.1| putative GTP-binding protein EngB [Vibrio caribbenthicus ATCC BAA-2122] Length = 219 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 103/196 (52%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N++ LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSSLNRLTNQRGLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 ID---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 123 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAEGF-GGDVSVAAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR + + Sbjct: 182 LKGIGVDTLRSKLDDW 197 >gi|291619507|ref|YP_003522249.1| EngB [Pantoea ananatis LMG 20103] gi|291154537|gb|ADD79121.1| EngB [Pantoea ananatis LMG 20103] Length = 246 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 46 FILSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 106 AEGK---------RLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVVLMDIRHP 156 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L K + +V SS Sbjct: 157 LKDLDQQMIQWAVESEIPVLLLLTKADKLASGARKAQLNMVKEASMAF-MGDVQVEVFSS 215 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ +R + Sbjct: 216 LKKIGVDKVRHKL 228 >gi|261210181|ref|ZP_05924478.1| GTP-binding protein EngB [Vibrio sp. RC341] gi|260840721|gb|EEX67270.1| GTP-binding protein EngB [Vibrio sp. RC341] Length = 220 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AE---------GCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + + V SS Sbjct: 123 MKDLDQQLIIWAVECGIPVQVMLTKADKLKSGARKAQVLKVREEAKTF-GGDVAVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + E Sbjct: 182 LSGIGVDTLRAKLDEW 197 >gi|315221694|ref|ZP_07863610.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus anginosus F0211] gi|315189181|gb|EFU22880.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus anginosus F0211] Length = 195 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDEIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRENLRAVVSLVDVRHEP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + + I SSV Sbjct: 122 STDDVQMYEFLKYYEIPVIVVATKADKVPRGKWNKYESVIKKKLD--FDKNDDFIIFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AILE I Sbjct: 180 NKDGLDAAWDAILEKI 195 >gi|237749544|ref|ZP_04580024.1| GTP-binding protein EngB [Oxalobacter formigenes OXCC13] gi|229380906|gb|EEO30997.1| GTP-binding protein EngB [Oxalobacter formigenes OXCC13] Length = 231 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 12/208 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + V + LPK PE+AF GRSN GKSS IN L N+K+LA S PGRTQH+NFF Sbjct: 9 FYKTVNHLRDLPKLDVPEVAFVGRSNAGKSSAINTLCNQKSLAFASKTPGRTQHINFFSI 68 Query: 74 KD-------FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 ++ + M LVD+PGYG+A+ + W L+ YL R L + L Sbjct: 69 GGAHVGQHRHDPVRESEIDMFLVDLPGYGFAQVSGSAKEHWQKLLSDYLIHRQQLTGLVL 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D RH + +D + + +LTK DKL+ + + L++ ++++Y Sbjct: 129 VMDARHPFQPLDVQLLEWFAVTGKPVHCLLTKADKLNRSESTNALKQVDTILKSYVDEEG 188 Query: 187 EVIP-----TSSVKRKGIEVLRKAILET 209 P SS KR GI+ IL+ Sbjct: 189 NPFPFTAQLFSSTKRIGIKEATDTILQL 216 >gi|254362533|ref|ZP_04978636.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] gi|153094133|gb|EDN75032.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] Length = 203 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N Sbjct: 6 HKTHFLTSAPDIRHLPEDTGVEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F LVD+PGYGYA P++ W + YL +R L V +L+D Sbjct: 66 LFKV---------ETNCKLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRECLGGVVILMD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + ++LTK DKLS + + ++ + I + +V Sbjct: 117 IRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKMVREAILPFQ-GDIQVE 175 Query: 190 PTSSVKRKGIEVLRKAILET 209 S++ + GI+ L + Sbjct: 176 AYSALNKIGIDKLSNKLDSW 195 >gi|282877547|ref|ZP_06286364.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccalis ATCC 35310] gi|281300332|gb|EFA92684.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella buccalis ATCC 35310] Length = 199 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 102/199 (51%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P I PK E AF GRSNVGKSSLIN+L N K L++TS+ PG+T +N Sbjct: 4 KKAEFLISSPTIDKCPKDNRIEYAFIGRSNVGKSSLINMLCNHKGLSKTSSTPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ D LVD+PGYG+A+ KK +I Y+ +R L +++LID Sbjct: 64 HFLIND---------EWYLVDLPGYGFAKRSKKVQADIEKMINTYILQREQLVNLFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID+ +L + + + IV TK DKL A+ + +R+ P Sbjct: 115 VRHEQQKIDRAFIDWLGENEIPFTIVFTKADKLGTVKAKANAAQWMEQLRDAWEELPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TSS KR G E L I E Sbjct: 175 ITSSEKRTGREELLAYIDE 193 >gi|257887187|ref|ZP_05666840.1| GTP-binding protein [Enterococcus faecium 1,141,733] gi|257823241|gb|EEV50173.1| GTP-binding protein [Enterococcus faecium 1,141,733] Length = 195 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PEIA +GRSNVGKSS IN L++RKNLARTS PG+TQ LNF++ Sbjct: 9 IISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQTLNFYLI- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 A+ VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 68 --------ENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + +V TK DK+ + + K + + I SSV Sbjct: 120 SQEDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKALD--FDHNDTFILFSSV 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E AI + I Sbjct: 178 TKQGKEEAWAAIDQAI 193 >gi|255528414|ref|ZP_05395213.1| GTP-binding protein HSR1-related protein [Clostridium carboxidivorans P7] gi|296184881|ref|ZP_06853292.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium carboxidivorans P7] gi|255507895|gb|EET84336.1| GTP-binding protein HSR1-related protein [Clostridium carboxidivorans P7] gi|296050663|gb|EFG90086.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium carboxidivorans P7] Length = 195 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 76/198 (38%), Positives = 107/198 (54%), Gaps = 11/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+ EIAF GRSNVGKSSLIN LVNR+ L + S PG+T+ +NFF+ Sbjct: 8 FVISAVVPNQYPQDNRVEIAFVGRSNVGKSSLINTLVNRRKLVKVSGTPGKTRLVNFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA+ K +SWG +I RYL+ R L+ V LL+DCRH Sbjct: 68 NN---------EFYFVDLPGYGYAKVSKSEKESWGKVIERYLTGREQLKKVMLLVDCRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ ++ IV TKIDKL ++ L+ + + E++ SS Sbjct: 119 PTEDDIIMYKWIKHYNYDAIIVATKIDKLKKAELRKNLKVIRETFE--LSDDEEILTFSS 176 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ G E L AI + IN Sbjct: 177 LKKLGKEELLDAIEQCIN 194 >gi|86140633|ref|ZP_01059192.1| GTP-binding protein [Leeuwenhoekiella blandensis MED217] gi|85832575|gb|EAQ51024.1| GTP-binding protein [Leeuwenhoekiella blandensis MED217] Length = 202 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 78/203 (38%), Positives = 106/203 (52%), Gaps = 11/203 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + FL + PK PE AF GRSNVGKSSLIN+L +RKNLA+TS PG+TQ +N Sbjct: 4 KSAEFLVSNSNVAKCPKNKMPEYAFIGRSNVGKSSLINMLTDRKNLAKTSGRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FV LVD+PGYGYAR KK + I +Y ER L ++LID Sbjct: 64 HFVINQ---------TWYLVDLPGYGYARVSKKVKKEFQKFITQYFEEREQLVSAFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTAHPEV 188 CRH + ID++ +L +K + + I+ TK DKL P + +E K L+ P Sbjct: 115 CRHEPQPIDREFMQYLGEKQIPFSIIFTKADKLKPKALERNIENYKQELLAGAWAEMPNY 174 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 +S+ G + + I + IN Sbjct: 175 FISSATNSTGKDEILDYI-DAIN 196 >gi|22537458|ref|NP_688309.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus agalactiae 2603V/R] gi|76787685|ref|YP_329952.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus agalactiae A909] gi|76798601|ref|ZP_00780829.1| GTP-binding protein [Streptococcus agalactiae 18RS21] gi|77406717|ref|ZP_00783756.1| GTP-binding protein [Streptococcus agalactiae H36B] gi|77409175|ref|ZP_00785887.1| GTP-binding protein [Streptococcus agalactiae COH1] gi|77411147|ref|ZP_00787499.1| GTP-binding protein [Streptococcus agalactiae CJB111] gi|77414086|ref|ZP_00790255.1| GTP-binding protein [Streptococcus agalactiae 515] gi|81845418|sp|Q8DZ11|ENGB_STRA5 RecName: Full=Probable GTP-binding protein EngB gi|119369268|sp|Q3K0K1|ENGB_STRA1 RecName: Full=Probable GTP-binding protein EngB gi|22534336|gb|AAN00182.1|AE014252_5 GTP-binding protein [Streptococcus agalactiae 2603V/R] gi|76562742|gb|ABA45326.1| GTP-binding protein [Streptococcus agalactiae A909] gi|76586035|gb|EAO62565.1| GTP-binding protein [Streptococcus agalactiae 18RS21] gi|77159884|gb|EAO71026.1| GTP-binding protein [Streptococcus agalactiae 515] gi|77162765|gb|EAO73724.1| GTP-binding protein [Streptococcus agalactiae CJB111] gi|77172221|gb|EAO75378.1| GTP-binding protein [Streptococcus agalactiae COH1] gi|77174680|gb|EAO77510.1| GTP-binding protein [Streptococcus agalactiae H36B] gi|319745298|gb|EFV97616.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus agalactiae ATCC 13813] Length = 198 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 101/210 (48%), Gaps = 12/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + T +A I L P+ PE+A +GRSNVGKSS IN L+ RKNLARTS+ Sbjct: 1 MAEEFLNTHNASILL-SAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSS 59 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNF+ D + VD+PGYGYA+ K WG +I YL R Sbjct: 60 KPGKTQLLNFYNIDD---------KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDN 110 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH D ++ FL + IV TK DK+ + K + Sbjct: 111 LRVVVSLVDFRHDPSADDIQMYEFLKYYEIPVIIVATKADKIPRGKWNKHESSIKKKLNF 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 H I SSV R G++ IL + Sbjct: 171 DKKDH--FIVFSSVDRTGLDESWDTILSEL 198 >gi|183597074|ref|ZP_02958567.1| hypothetical protein PROSTU_00314 [Providencia stuartii ATCC 25827] gi|188023736|gb|EDU61776.1| hypothetical protein PROSTU_00314 [Providencia stuartii ATCC 25827] Length = 203 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LPK E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL +R ++ + +L+D RH Sbjct: 73 EE---------GIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRECIKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + + ++LTK DKL+ ++ L + + + EV S+ Sbjct: 124 LKDLDMQMIEWSIAMEIPVLVLLTKADKLASGARKKQLMEVRQALSPL-GGDVEVEYFSA 182 Query: 194 VKRKGIEVLRKAILET 209 +K+ GI+ LR + Sbjct: 183 LKKIGIDKLRLKLDSW 198 >gi|212711547|ref|ZP_03319675.1| hypothetical protein PROVALCAL_02620 [Providencia alcalifaciens DSM 30120] gi|212685649|gb|EEB45177.1| hypothetical protein PROVALCAL_02620 [Providencia alcalifaciens DSM 30120] Length = 206 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LPK E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P+ W + YL +R ++ + +L+D RH Sbjct: 73 EE---------GIRLVDLPGYGYAEVPEDMKRKWQQALGEYLQKRECIKGLVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTS 192 +K +D + + + ++LTK DKL+ ++ L + + + EV S Sbjct: 124 LKDLDMQMIEWSVAMNIPVLVLLTKADKLASGARKKQLMEVRQALAPLEAEGDIEVEYFS 183 Query: 193 SVKRKGIEVLRKAILET 209 ++K+ GI+ LR + Sbjct: 184 ALKKIGIDKLRIKLDSW 200 >gi|317057122|ref|YP_004105589.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 7] gi|315449391|gb|ADU22955.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 7] Length = 255 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 114/203 (56%), Gaps = 15/203 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ F+ ++ +P++ PE AFSGRSNVGKSSLIN + NRKN+AR S+ PG+T Sbjct: 26 FNKAE--FITSYGKLSQIPESDRPEFAFSGRSNVGKSSLINKIFNRKNMARVSSVPGKTV 83 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE-RSTLRCVY 125 +NFF +D + VD+PGYGYA K WG LI YL++ L V+ Sbjct: 84 TINFFSVED----------VYFVDLPGYGYANVSKGEKKGWGDLIGGYLADFDRDLELVF 133 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LID RH + D + ++L + + IVLTK DKL PT +E +E K I + H Sbjct: 134 QLIDMRHAPSKDDIQMINYLIDNEIPFVIVLTKADKLKPTARKERMEAFKDEIPYFEDIH 193 Query: 186 PEVIPTSSVKRKGIEVLRKAILE 208 IP S+V +G++ L+ I E Sbjct: 194 --CIPFSAVTGEGVDELKAIIEE 214 >gi|257898294|ref|ZP_05677947.1| GTP-binding protein [Enterococcus faecium Com15] gi|293557137|ref|ZP_06675691.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium E1039] gi|294614148|ref|ZP_06694069.1| GTP-binding protein [Enterococcus faecium E1636] gi|257836206|gb|EEV61280.1| GTP-binding protein [Enterococcus faecium Com15] gi|291592998|gb|EFF24586.1| GTP-binding protein [Enterococcus faecium E1636] gi|291600706|gb|EFF31004.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium E1039] Length = 195 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PEIA +GRSNVGKSS IN L++RKNLARTS PG+TQ LNF++ Sbjct: 9 IISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQTLNFYLI- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 A+ VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 68 --------ENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + +V TK DK+ + + K + + I SSV Sbjct: 120 SQEDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKALD--FDRNDTFILFSSV 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E AI + I Sbjct: 178 TKQGKEEAWAAIEQAI 193 >gi|323493193|ref|ZP_08098323.1| putative GTP-binding protein EngB [Vibrio brasiliensis LMG 20546] gi|323312540|gb|EGA65674.1| putative GTP-binding protein EngB [Vibrio brasiliensis LMG 20546] Length = 221 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 123 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGF-GGDVSVAAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++VLR + E Sbjct: 182 LKGIGVDVLRSKLDEW 197 >gi|253690586|ref|YP_003019776.1| GTP-binding protein HSR1-related [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259645903|sp|C6DJE1|ENGB_PECCP RecName: Full=Probable GTP-binding protein EngB gi|251757164|gb|ACT15240.1| GTP-binding protein HSR1-related [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 211 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 108/203 (53%), Gaps = 10/203 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ P+I L E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ Sbjct: 5 YNYHMTRFIISAPDIRHLATDSGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQ 64 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D + LVD+PGYGYA P++ W + YL +R++L+ + + Sbjct: 65 LINLFEVTD---------GVRLVDLPGYGYAEVPEQMKIKWQRALGEYLQKRNSLKGLVV 115 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + + + ++LTK DKL+ + L + + + Sbjct: 116 LMDIRHPLKDLDQQMIQWAVDVELPVLVLLTKADKLASGARKAQLNMVREAVLPF-MGDI 174 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 +V SS+K+ G++ LR+ + Sbjct: 175 QVEAFSSLKKLGVDKLRQKLDNW 197 >gi|295399411|ref|ZP_06809393.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus thermoglucosidasius C56-YS93] gi|294978877|gb|EFG54473.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus thermoglucosidasius C56-YS93] Length = 193 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 11/197 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + + P PE A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF Sbjct: 5 KAELVISAVKPEQYPDGLLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 ++ + ++ VD+PGYG+A+ KK ++WG ++ Y + R LR V L++D Sbjct: 65 YLINE---------SLYFVDVPGYGFAKVSKKEREAWGKMMETYFTTREQLRAVVLIVDL 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D ++ FL + IV TK DK+ Q+ + + + E+I Sbjct: 116 RHPPTKDDVMMYEFLKHYEIPAIIVATKADKVPKGKWQKHQKVVRETLNI--ADGDELIV 173 Query: 191 TSSVKRKGIEVLRKAIL 207 S+ +G E A+ Sbjct: 174 FSAETGQGKEEAWAALE 190 >gi|229918355|ref|YP_002887001.1| ribosome biogenesis GTP-binding protein YsxC [Exiguobacterium sp. AT1b] gi|259645896|sp|C4L4J3|ENGB_EXISA RecName: Full=Probable GTP-binding protein EngB gi|229469784|gb|ACQ71556.1| small GTP-binding protein [Exiguobacterium sp. AT1b] Length = 197 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 103/201 (51%), Gaps = 11/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ P PE+A +GRSNVGKSS IN + RK LARTS+ PG+TQ LN Sbjct: 4 NKAEFVTSAVAPDHYPVHELPEVALAGRSNVGKSSFINKICQRKALARTSSKPGKTQTLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D + VD+PGYGYA+ K + WG ++ +YL+ + LR V LL+D Sbjct: 64 FFNIND---------EIMFVDVPGYGYAKVSKTEREKWGVMMEQYLTSQEALRGVVLLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D +++FL + +V TK+DK+ + Q+ K ++ P+ + Sbjct: 115 IRHDPTGDDVTMYNFLKHYEIPVIVVATKLDKIKKSQRQKHEAAVKRKLQFDPS--DRFV 172 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ +G + KAI I Sbjct: 173 AFSAETAEGKDEAWKAIYALI 193 >gi|150388895|ref|YP_001318944.1| GTP-binding protein, HSR1-related [Alkaliphilus metalliredigens QYMF] gi|166920106|sp|A6TM67|ENGB_ALKMQ RecName: Full=Probable GTP-binding protein EngB gi|149948757|gb|ABR47285.1| GTP-binding protein, HSR1-related [Alkaliphilus metalliredigens QYMF] Length = 208 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 11/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ G PEIA +GRSNVGKSSLIN ++NRK LAR S++PG+T+ LNF++ Sbjct: 9 VMSAVAPKQYPEEGLPEIALAGRSNVGKSSLINTILNRKKLARVSSSPGKTRTLNFYLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 LVD+PGYGYAR K SWG ++ YLS R L V LLID RH Sbjct: 69 ---------KEFHLVDLPGYGYARVSKGEKSSWGKMLETYLSNRPNLYEVVLLIDIRHEP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + DQ ++ ++ +V TK DK++ + Q+ + + + P +IP SS+ Sbjct: 120 SEQDQQMYQWIRHYGYGTIVVATKSDKIARSQHQKHFKMIRDTLGMSPE--DRLIPISSL 177 Query: 195 KRKGIEVLRKAILE 208 K+ GIE L A+ + Sbjct: 178 KKLGIEQLWGALED 191 >gi|188532190|ref|YP_001905987.1| Probable GTP-binding protein EngB [Erwinia tasmaniensis Et1/99] gi|188027232|emb|CAO95071.1| Probable GTP-binding protein EngB [Erwinia tasmaniensis Et1/99] Length = 218 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 20 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFQV 79 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 80 AE---------GYRLVDLPGYGYAEVPEETKLKWQRSLAEYLHDRHCLKGLVVLMDIRHP 130 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D+ + + + ++LTK DKL+ + L + + + EV SS Sbjct: 131 LKELDRQMILWAVQSGREVLVLLTKADKLASGARKAQLNAVREEAKTFLGT-VEVELFSS 189 Query: 194 VKRKGIEVLRKAILET 209 +K+ G++ L + + Sbjct: 190 LKKIGVDKLSQKLDSW 205 >gi|145639362|ref|ZP_01794968.1| GTPase EngB [Haemophilus influenzae PittII] gi|145271665|gb|EDK11576.1| GTPase EngB [Haemophilus influenzae PittII] Length = 205 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 105/205 (51%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + +YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEQMKIQWQKSLGKYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGLVVLMDIRHPLKDLDQQMIEWAVSANLPILLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S+ + GI+ L + Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKLAAKL 195 >gi|327395815|dbj|BAK13237.1| probable GTP-binding protein EngB [Pantoea ananatis AJ13355] Length = 246 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ +N F Sbjct: 46 FILSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEV 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 106 AEGK---------RLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRQALKGLVVLMDIRHP 156 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL+ + L K + +V SS Sbjct: 157 LKDLDQQMIQWAVESEIPVLLLLTKADKLASGARKAQLNMVKEASMAF-MGDVQVEVFSS 215 Query: 194 VKRKGIEVLRKAI 206 +K+ G++ +R + Sbjct: 216 LKKIGVDKVRHKL 228 >gi|260063723|ref|YP_003196803.1| putative GTP-binding cell division protein [Robiginitalea biformata HTCC2501] gi|88783168|gb|EAR14341.1| putative GTP-binding cell division protein [Robiginitalea biformata HTCC2501] Length = 208 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 106/202 (52%), Gaps = 11/202 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L +RK+LA+ S PG+TQ +N Sbjct: 5 SAEFVVSNTDVSRCPAEPLPEYAFIGRSNVGKSSLINMLTDRKHLAKISGRPGKTQLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F D LVD+PGYGYAR KK+ ++ LI RY ER L +LL+D Sbjct: 65 FRIND---------NWFLVDLPGYGYARTSKKDKAAFQKLIHRYFRERRQLLSAFLLVDI 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVI 189 RH + ID + +L + + + ++ TK DKL P + +RN A P Sbjct: 116 RHEPQPIDLEFMEWLTGEGIPFALIFTKADKLKPGAVSRQTDGYLQAMRNAGWEADPPFF 175 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS+K G + + I E IN Sbjct: 176 VTSSLKGIGKDEVLAYIGE-IN 196 >gi|269103719|ref|ZP_06156416.1| GTP-binding protein EngB [Photobacterium damselae subsp. damselae CIP 102761] gi|268163617|gb|EEZ42113.1| GTP-binding protein EngB [Photobacterium damselae subsp. damselae CIP 102761] Length = 221 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + +K+LARTS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPQDSGVEIAFAGRSNAGKSSALNRITEQKSLARTSKTPGRTQLINMFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N L+D+PGYG+A+ P + W + YL +R L + +L+D RH Sbjct: 72 ESGCN---------LIDLPGYGFAQVPLEMKIKWQKSLGEYLQKRECLAGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DKL + + K + + + +V SS Sbjct: 123 LKDLDQQMIYWGVESGLPVLVLLTKADKLKSGARKAQVLKVRKDLADV-AGDVQVEAFSS 181 Query: 194 VKRKGIEVLRKAILETIN 211 +K G++ +R + Sbjct: 182 LKGIGVDQVRHKLDAWFG 199 >gi|317499960|ref|ZP_07958196.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae bacterium 8_1_57FAA] gi|316898677|gb|EFV20712.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae bacterium 8_1_57FAA] Length = 202 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 77/191 (40%), Positives = 112/191 (58%), Gaps = 12/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ D Sbjct: 16 STLPENDKPEVAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYAR +K + WG +I RYL L+ V+LLID RH D+ + Sbjct: 70 ---EMYLVDLPGYGYARVSEKEKEQWGRMIERYLHSSKQLKAVFLLIDIRHDPSANDRMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ ++ I+ TK+DK+ + Q+ ++ K + P +VIP SSV ++G E Sbjct: 127 YQWIVEQGYHPIIIATKLDKIKRSQIQKHVKMLKQGLDLVPGT--KVIPFSSVSKQGKED 184 Query: 202 LRKAI-LETIN 211 + + I E N Sbjct: 185 IWELIEAECFN 195 >gi|283787469|ref|YP_003367334.1| GTP-binding protein [Citrobacter rodentium ICC168] gi|282950923|emb|CBG90600.1| probable GTP-binding protein [Citrobacter rodentium ICC168] Length = 198 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 10/194 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F D Sbjct: 1 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEVVD 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K Sbjct: 61 GK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLK 111 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +DQ + + + + ++LTK DKL+ + L + + + +V SS+K Sbjct: 112 DLDQQMILWAVESNIQVLVLLTKADKLASGARKAQLNMVREAVLAF-NGDVQVEAFSSLK 170 Query: 196 RKGIEVLRKAILET 209 ++G++ LR+ + Sbjct: 171 KQGVDKLRQKLDSW 184 >gi|315178731|gb|ADT85645.1| GTPase EngB [Vibrio furnissii NCTC 11218] Length = 224 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPTDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + W + YL +R+ L+ + +L+D RH Sbjct: 72 TE---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRTCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + +V SS Sbjct: 123 MKDLDQQLVVWAVECGIPVQVLLTKADKLKSGARKAQVLKIREAALAF-GGDVQVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 G++VLR + Sbjct: 182 HNGIGVDVLRNKLDSW 197 >gi|29376444|ref|NP_815598.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis V583] gi|227519262|ref|ZP_03949311.1| GTPase [Enterococcus faecalis TX0104] gi|227555531|ref|ZP_03985578.1| GTPase [Enterococcus faecalis HH22] gi|229545497|ref|ZP_04434222.1| GTPase [Enterococcus faecalis TX1322] gi|229549743|ref|ZP_04438468.1| GTPase [Enterococcus faecalis ATCC 29200] gi|255972439|ref|ZP_05423025.1| GTP-binding protein [Enterococcus faecalis T1] gi|255975539|ref|ZP_05426125.1| GTP-binding protein [Enterococcus faecalis T2] gi|256762853|ref|ZP_05503433.1| GTP-binding protein [Enterococcus faecalis T3] gi|256853437|ref|ZP_05558807.1| GTPase EngB [Enterococcus faecalis T8] gi|256959235|ref|ZP_05563406.1| GTP-binding protein [Enterococcus faecalis DS5] gi|256961588|ref|ZP_05565759.1| GTP-binding protein [Enterococcus faecalis Merz96] gi|256964804|ref|ZP_05568975.1| GTP-binding protein [Enterococcus faecalis HIP11704] gi|257079303|ref|ZP_05573664.1| GTP-binding protein [Enterococcus faecalis JH1] gi|257082258|ref|ZP_05576619.1| GTP-binding protein [Enterococcus faecalis E1Sol] gi|257084875|ref|ZP_05579236.1| GTP-binding protein [Enterococcus faecalis Fly1] gi|257087128|ref|ZP_05581489.1| GTP-binding protein [Enterococcus faecalis D6] gi|257416358|ref|ZP_05593352.1| GTP-binding protein [Enterococcus faecalis AR01/DG] gi|257419606|ref|ZP_05596600.1| GTP-binding protein [Enterococcus faecalis T11] gi|257422288|ref|ZP_05599278.1| GTPase engB [Enterococcus faecalis X98] gi|293382410|ref|ZP_06628347.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis R712] gi|293388259|ref|ZP_06632775.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis S613] gi|294779795|ref|ZP_06745182.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis PC1.1] gi|300861039|ref|ZP_07107126.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TUSoD Ef11] gi|307268263|ref|ZP_07549647.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX4248] gi|307272886|ref|ZP_07554133.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0855] gi|307275639|ref|ZP_07556780.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX2134] gi|307280531|ref|ZP_07561580.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0860] gi|307287932|ref|ZP_07567965.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0109] gi|307295962|ref|ZP_07575794.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0411] gi|312900931|ref|ZP_07760225.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0470] gi|312902701|ref|ZP_07761905.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0635] gi|312908363|ref|ZP_07767327.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis DAPTO 512] gi|312910564|ref|ZP_07769406.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis DAPTO 516] gi|312950950|ref|ZP_07769860.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0102] gi|81838891|sp|Q833M8|ENGB_ENTFA RecName: Full=Probable GTP-binding protein EngB gi|29343908|gb|AAO81668.1| GTP-binding protein [Enterococcus faecalis V583] gi|227073274|gb|EEI11237.1| GTPase [Enterococcus faecalis TX0104] gi|227175336|gb|EEI56308.1| GTPase [Enterococcus faecalis HH22] gi|229305012|gb|EEN71008.1| GTPase [Enterococcus faecalis ATCC 29200] gi|229309413|gb|EEN75400.1| GTPase [Enterococcus faecalis TX1322] gi|255963457|gb|EET95933.1| GTP-binding protein [Enterococcus faecalis T1] gi|255968411|gb|EET99033.1| GTP-binding protein [Enterococcus faecalis T2] gi|256684104|gb|EEU23799.1| GTP-binding protein [Enterococcus faecalis T3] gi|256711896|gb|EEU26934.1| GTPase EngB [Enterococcus faecalis T8] gi|256949731|gb|EEU66363.1| GTP-binding protein [Enterococcus faecalis DS5] gi|256952084|gb|EEU68716.1| GTP-binding protein [Enterococcus faecalis Merz96] gi|256955300|gb|EEU71932.1| GTP-binding protein [Enterococcus faecalis HIP11704] gi|256987333|gb|EEU74635.1| GTP-binding protein [Enterococcus faecalis JH1] gi|256990288|gb|EEU77590.1| GTP-binding protein [Enterococcus faecalis E1Sol] gi|256992905|gb|EEU80207.1| GTP-binding protein [Enterococcus faecalis Fly1] gi|256995158|gb|EEU82460.1| GTP-binding protein [Enterococcus faecalis D6] gi|257158186|gb|EEU88146.1| GTP-binding protein [Enterococcus faecalis ARO1/DG] gi|257161434|gb|EEU91394.1| GTP-binding protein [Enterococcus faecalis T11] gi|257164112|gb|EEU94072.1| GTPase engB [Enterococcus faecalis X98] gi|291080186|gb|EFE17550.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis R712] gi|291082341|gb|EFE19304.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis S613] gi|294453169|gb|EFG21584.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis PC1.1] gi|300850078|gb|EFK77828.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TUSoD Ef11] gi|306496293|gb|EFM65872.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0411] gi|306501077|gb|EFM70384.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0109] gi|306504079|gb|EFM73295.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0860] gi|306507744|gb|EFM76873.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX2134] gi|306510500|gb|EFM79523.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0855] gi|306515423|gb|EFM83954.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX4248] gi|310625777|gb|EFQ09060.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis DAPTO 512] gi|310631099|gb|EFQ14382.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0102] gi|310633755|gb|EFQ17038.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0635] gi|311289112|gb|EFQ67668.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis DAPTO 516] gi|311292030|gb|EFQ70586.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0470] gi|315025927|gb|EFT37859.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX2137] gi|315028965|gb|EFT40897.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX4000] gi|315033239|gb|EFT45171.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0017] gi|315036724|gb|EFT48656.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0027] gi|315143499|gb|EFT87515.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX2141] gi|315147582|gb|EFT91598.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX4244] gi|315149320|gb|EFT93336.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0012] gi|315152207|gb|EFT96223.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0031] gi|315157012|gb|EFU01029.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0043] gi|315159834|gb|EFU03851.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0312] gi|315161526|gb|EFU05543.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0645] gi|315163616|gb|EFU07633.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX1302] gi|315167355|gb|EFU11372.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX1341] gi|315169562|gb|EFU13579.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX1342] gi|315174261|gb|EFU18278.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX1346] gi|315574491|gb|EFU86682.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0309B] gi|315576776|gb|EFU88967.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0630] gi|315581847|gb|EFU94038.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX0309A] gi|323481058|gb|ADX80497.1| GTPase, EngB subfamily [Enterococcus faecalis 62] gi|327535433|gb|AEA94267.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis OG1RF] gi|329572879|gb|EGG54504.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecalis TX1467] Length = 193 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P++ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNF++ + Sbjct: 9 VISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTLNFYLIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D A+ VD+PGYGYA+ K WG +I Y+++R LR V LID RH Sbjct: 69 D---------ALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + IV TK DK+ + K + + I SS Sbjct: 120 TQDDIQMYEFLKYYDLPVIIVATKADKIPRGKWNKHESVIKKALN--FDKQDDFIIFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E AI + + Sbjct: 178 TKEGKEAAWTAIEKFL 193 >gi|332882335|ref|ZP_08449963.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679719|gb|EGJ52688.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 230 Score = 230 bits (588), Expect = 8e-59, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 10/208 (4%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 T + F+ +G P PE AF GRSNVGKSSLIN+L N K LA+TS PG Sbjct: 30 QTDMEIKSAEFVISNSSVGKCPSTHAPEYAFIGRSNVGKSSLINMLTNNKKLAKTSATPG 89 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 +T +N F+ + LVD+PGYGYA+ KK + +I Y+ R + Sbjct: 90 KTLLINHFLINN---------EWYLVDLPGYGYAKISKKEQEKLQQIISSYILCREQMTN 140 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 +++L+D RH ++ID + +L + + + IV TK DK PT + ++ ++ Sbjct: 141 LFVLVDSRHEPQKIDMEFIEWLGENGIPFSIVFTKADKSKPTKLKANIDAYLKALKEQWE 200 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETIN 211 P TSS + G L I E+IN Sbjct: 201 ELPPYFITSSENKTGRTELLNYI-ESIN 227 >gi|260767539|ref|ZP_05876475.1| GTP-binding protein EngB [Vibrio furnissii CIP 102972] gi|260617439|gb|EEX42622.1| GTP-binding protein EngB [Vibrio furnissii CIP 102972] Length = 224 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+KNLA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPTDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + W + YL +R+ L+ + +L+D RH Sbjct: 72 TE---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRTCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + +V SS Sbjct: 123 MKDLDQQLVVWAVECGIPVQVLLTKADKLKSGARKAQVLKVREAALAF-GGDVQVDAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 G++VLR + Sbjct: 182 HNGIGVDVLRNKLDSW 197 >gi|226324369|ref|ZP_03799887.1| hypothetical protein COPCOM_02150 [Coprococcus comes ATCC 27758] gi|225206817|gb|EEG89171.1| hypothetical protein COPCOM_02150 [Coprococcus comes ATCC 27758] Length = 200 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 11/185 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PEIAF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ + Sbjct: 16 SKLPDHTLPEIAFAGKSNVGKSSLINALMNRKALARTSAKPGKTQTINFYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ ++ WG LI RYL LR V+LLID RH D+ + Sbjct: 70 ---EMYLVDLPGYGYAKVSEQEKAQWGKLIERYLHGSKQLRAVFLLIDIRHDPSANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + I+ TK+DKL + Q+ ++ K ++ P VIP S+ ++G + Sbjct: 127 YDWIVDQGFNPIIIATKLDKLKRSQVQKQVKAIKTGLKLLPGTV--VIPFSAETKQGRDE 184 Query: 202 LRKAI 206 + + Sbjct: 185 IWNLV 189 >gi|223932114|ref|ZP_03624118.1| small GTP-binding protein domain protein [Streptococcus suis 89/1591] gi|302023733|ref|ZP_07248944.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus suis 05HAS68] gi|330832768|ref|YP_004401593.1| GTP-binding protein [Streptococcus suis ST3] gi|223899095|gb|EEF65452.1| small GTP-binding protein domain protein [Streptococcus suis 89/1591] gi|329306991|gb|AEB81407.1| GTP-binding protein [Streptococcus suis ST3] Length = 195 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 94/196 (47%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P PEIA +GRSNVGKSS IN L+ RKNLARTS PG+TQ LNF+ Sbjct: 11 LLSAVSKAQYPGDDIPEIALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQQLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KIRFVDVPGYGYAKVSKTERAKWGKMIEEYLTTRENLRVVVSLVDMRHEP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + + + + SS Sbjct: 122 SADDVQMYDFLKYYEIPVIIVATKADKIPQGKWNKHESMIKKKLD--FDKNDQFVIFSSE 179 Query: 195 KRKGIEVLRKAILETI 210 R G + AIL I Sbjct: 180 TRHGYDQAWDAILSNI 195 >gi|212638449|ref|YP_002314969.1| ribosome biogenesis GTP-binding protein YsxC [Anoxybacillus flavithermus WK1] gi|226741194|sp|B7GH28|ENGB_ANOFW RecName: Full=Probable GTP-binding protein EngB gi|212559929|gb|ACJ32984.1| GTP-binding protein YscX, possible signaling factor [Anoxybacillus flavithermus WK1] Length = 193 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P PE A +GRSNVGKSS IN ++NRKN ARTS+ PG+TQ LNF+ Sbjct: 9 VISAVKQEQYPAGQLPEFALAGRSNVGKSSFINKMINRKNFARTSSKPGKTQTLNFYRIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D A VD+PGYG+A+ K ++WG +I Y + R L+ L++D RH Sbjct: 69 D---------AFYFVDVPGYGFAKVSKTEREAWGKMIETYFTTREQLKAALLIVDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL + ++ TK DK+ Q+ + K +R + E+I S+ Sbjct: 120 TKDDVMMYEFLKHYNIPTLVIATKADKIPRGKWQQHAKVAKETLR--LISDDELIIFSAE 177 Query: 195 KRKGIEVLRKAILETI 210 +G + A+ + + Sbjct: 178 TGQGKDEAWGALQKWM 193 >gi|317494611|ref|ZP_07953024.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917541|gb|EFV38887.1| ribosome biogenesis GTP-binding protein YsxC [Enterobacteriaceae bacterium 9_2_54FAA] Length = 216 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 106/200 (53%), Gaps = 10/200 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ P+I LP E+AF+GRSN GKSS +N L N+K LARTS PGRTQ Sbjct: 6 YNYHVTHFVTSAPDIRALPADIGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQ 65 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D + LVD+PGYGYA P++ W + YL +R+ L+ + + Sbjct: 66 LINLFEVTD---------GVRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRNCLKGLVV 116 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + + + ++LTK DKL+ + L + + + Sbjct: 117 LMDIRHPLKDLDQQMIQWAVDVNLPVMLLLTKADKLASGARKAQLNMVREAVLPF-MGDI 175 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 +V SS+K+ G++ L + + Sbjct: 176 QVETFSSLKKFGVDKLSEKL 195 >gi|255610864|ref|XP_002539243.1| GTP-binding protein engB, putative [Ricinus communis] gi|223507802|gb|EEF23140.1| GTP-binding protein engB, putative [Ricinus communis] Length = 211 Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 102/205 (49%), Gaps = 11/205 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F + F + LP A E+AF+GRSN GKSS +N L N LA S PGR Sbjct: 2 PVFQNA--RFHLSAHHLRDLPPASGIEVAFAGRSNAGKSSALNTLANHNRLAFVSKQPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +NFF D LVD+PGYGYA+ P+ W ++ RYLSER +L + Sbjct: 60 TQLINFFTLGDDK---------HLVDLPGYGYAKVPEAMRMHWQNVLSRYLSERQSLAGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D RH + +D+ + + ++LTK DKLS + + L K + + Sbjct: 111 VLVMDSRHPLTPLDRQMLDWFCPSGKPVHVLLTKSDKLSRSESTILLGKVRKELHTGWGE 170 Query: 185 HPEVIPTSSVKRKGIEVLRKAILET 209 V SS+K+ G++ K + E Sbjct: 171 KITVQLFSSLKKLGVDEAEKVLGEW 195 >gi|288905455|ref|YP_003430677.1| GTP-binding protein [Streptococcus gallolyticus UCN34] gi|325978445|ref|YP_004288161.1| ribosome biogenesis GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732181|emb|CBI13746.1| putative GTP-binding protein [Streptococcus gallolyticus UCN34] gi|325178373|emb|CBZ48417.1| engB, yihA, ysxC; ribosome biogenesis GTP-binding protein [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 197 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ Sbjct: 13 LLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNID 72 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL R LR V L+D RH Sbjct: 73 D---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDP 123 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + N+ + +I SSV Sbjct: 124 SADDVQMYDFLKYYEIPVIVVATKADKIPRGKWNKHESAIKKKL-NFDKSDKFII-FSSV 181 Query: 195 KRKGIEVLRKAILETI 210 R G++ +IL+ + Sbjct: 182 DRTGLDESWDSILDEL 197 >gi|257090205|ref|ZP_05584566.1| GTP-binding protein [Enterococcus faecalis CH188] gi|256999017|gb|EEU85537.1| GTP-binding protein [Enterococcus faecalis CH188] Length = 193 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P++ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNF++ + Sbjct: 9 VISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTLNFYLIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D A+ VD+PGYGYA+ K WG +I Y+++R LR V LID RH Sbjct: 69 D---------ALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRVVVSLIDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + IV TK DK+ + K + + I SS Sbjct: 120 TQDDIQMYEFLKYYDLPVIIVATKADKIPRGKWNKHESVIKKALN--FDKQDDFIIFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E AI + + Sbjct: 178 TKEGKEAAWTAIEKFL 193 >gi|152976884|ref|YP_001376401.1| GTPase EngB [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189037170|sp|A7GTE8|ENGB_BACCN RecName: Full=Probable GTP-binding protein EngB gi|152025636|gb|ABS23406.1| small GTP-binding protein [Bacillus cytotoxicus NVH 391-98] Length = 198 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 73/192 (38%), Positives = 96/192 (50%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ Sbjct: 9 VISAVRPDQYPGGDLPEIALAGRSNVGKSSFINTILNRKKLVRISSKPGKTQTLNFFIIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYA+ K +WG +I Y + R L L+ID RH Sbjct: 69 DM---------MHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDATVLVIDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL + I+ TK DK+ Q+ L+ K + A EV+ SS Sbjct: 120 TKDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVKETLD--VEAGDEVVLFSSE 177 Query: 195 KRKGIEVLRKAI 206 G E KAI Sbjct: 178 TGLGKEEAWKAI 189 >gi|260775066|ref|ZP_05883965.1| GTP-binding protein EngB [Vibrio coralliilyticus ATCC BAA-450] gi|260608983|gb|EEX35143.1| GTP-binding protein EngB [Vibrio coralliilyticus ATCC BAA-450] Length = 220 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I +P+ E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHMPEDEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 123 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDSAGF-GGDVSVAAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++VLR + E Sbjct: 182 LKGIGVDVLRNKLDEW 197 >gi|116618614|ref|YP_818985.1| GTPase EngB [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227432007|ref|ZP_03914027.1| GTPase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122271186|sp|Q03W10|ENGB_LEUMM RecName: Full=Probable GTP-binding protein EngB gi|116097461|gb|ABJ62612.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227352292|gb|EEJ42498.1| GTPase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 194 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 10/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P G PEIA GRSNVGKSSL N L+ RKN ARTS+ PG+TQ LNF+ + Sbjct: 9 VMSAVSASQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTLNFYDVE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K +++G +I Y++ R LR V L+D RH Sbjct: 69 D---------KLYFVDVPGYGYAKVSKAQREAFGVMIEEYITSRKQLRGVISLVDARHEP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ +L + +V TK DK+S + K + + + SS Sbjct: 120 SEDDISMYEWLHYYNIPILVVATKSDKISRGKFNKAESVIKKALG-FDNEDSDFQFFSSE 178 Query: 195 KRKGIEVLRKAILETI 210 + G + + I + I Sbjct: 179 TKYGKDEVWHWIEQHI 194 >gi|261823707|ref|YP_003261813.1| ribosome biogenesis GTP-binding protein YsxC [Pectobacterium wasabiae WPP163] gi|261607720|gb|ACX90206.1| ribosome biogenesis GTP-binding protein YsxC [Pectobacterium wasabiae WPP163] Length = 211 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 10/205 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ P+I L E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ Sbjct: 5 YNYHMTRFIISAPDIRHLATDSGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQ 64 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D + LVD+PGYGYA P++ W + YL +R++L+ + + Sbjct: 65 LINLFQVAD---------GVRLVDLPGYGYAEVPEQMKIKWQRALGEYLQKRNSLKGLVV 115 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + + + ++LTK DKL+ + L + + + Sbjct: 116 LMDIRHPLKDLDQQMIQWAVDVKLPVLVLLTKADKLASGARKTQLHMVREAVAPF-MGDI 174 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 +V SS+K+ G++ L++ + N Sbjct: 175 QVEAFSSLKKIGVDKLQQKLDNWFN 199 >gi|312110030|ref|YP_003988346.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y4.1MC1] gi|311215131|gb|ADP73735.1| ribosome biogenesis GTP-binding protein YsxC [Geobacillus sp. Y4.1MC1] Length = 193 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 11/197 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + + P PE A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF Sbjct: 5 KAELVISAVKPEQYPDGLLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 ++ + ++ VD+PGYG+A+ KK ++WG ++ Y + R LR V L++D Sbjct: 65 YLINE---------SLYFVDVPGYGFAKVSKKEREAWGKMMGTYFTTREQLRAVVLIVDL 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D ++ FL + IV TK DK+ Q+ + + + E+I Sbjct: 116 RHPPTKDDVMMYEFLKHYEIPAIIVATKADKVPKGKWQKHQKVVRETLNI--ADGDELIV 173 Query: 191 TSSVKRKGIEVLRKAIL 207 S+ +G E A+ Sbjct: 174 FSAETGQGKEEAWAALE 190 >gi|295113199|emb|CBL31836.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Enterococcus sp. 7L76] Length = 193 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P++ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNF++ + Sbjct: 9 MISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTLNFYLIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D A+ VD+PGYGYA+ K WG +I Y+++R LR V LID RH Sbjct: 69 D---------ALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + IV TK DK+ + K + + I SS Sbjct: 120 TQDDIQMYEFLKYYDLPVIIVATKADKIPRGKWNKHESVIKKALN--FDKQDDFIIFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E AI + + Sbjct: 178 TKEGKEAAWTAIEKFL 193 >gi|253995667|ref|YP_003047731.1| ribosome biogenesis GTP-binding protein YsxC [Methylotenera mobilis JLW8] gi|253982346|gb|ACT47204.1| GTP-binding protein HSR1-related [Methylotenera mobilis JLW8] Length = 211 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 107/210 (50%), Gaps = 15/210 (7%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F +A F + LP A E+AF+GRSN GKSS +N L N LA S PGR Sbjct: 2 PLFQNAA--FYISAHHLRDLPPASGVEVAFAGRSNAGKSSALNTLANHNRLAFVSKQPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +NFF + LVD+PGYGYA+ P+ W ++ RYLSERS+L + Sbjct: 60 TQLINFFTLGNDR---------HLVDLPGYGYAKVPEAMRAHWQNVLARYLSERSSLGGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D RH + +D+ + + ++LTK DKLS A TL + + + Sbjct: 111 VLVMDSRHPLTPLDRQMLDWFCPSGKPVHVLLTKSDKLSRGEASLTLNRVRKELIETWGN 170 Query: 185 HPE----VIPTSSVKRKGIEVLRKAILETI 210 H + SS+K++G+E K I + + Sbjct: 171 HYNSECTIQLFSSLKKQGVEEAEKVIGKWL 200 >gi|148826267|ref|YP_001291020.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae PittEE] gi|260581832|ref|ZP_05849628.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae NT127] gi|166225958|sp|A5UCY6|ENGB_HAEIE RecName: Full=Probable GTP-binding protein EngB gi|148716427|gb|ABQ98637.1| GTP-binding protein [Haemophilus influenzae PittEE] gi|260095025|gb|EEW78917.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus influenzae NT127] gi|309973414|gb|ADO96615.1| GTP-binding protein YihA [Haemophilus influenzae R2846] Length = 205 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNYKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 SGLVVLMDIRHPLKDLDQQMIEWAVSADLPILLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S+ + GI+ L + Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKLAAKL 195 >gi|257884403|ref|ZP_05664056.1| GTP-binding protein [Enterococcus faecium 1,231,501] gi|257820241|gb|EEV47389.1| GTP-binding protein [Enterococcus faecium 1,231,501] Length = 195 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PEIA +GRSNVGKSS IN L++RKNLARTS PG+TQ LNF++ Sbjct: 9 IISAVAPKQYPETQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQTLNFYLI- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 A+ VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 68 --------ENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTREQLRAVVSLVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + +V TK DK+ + + K + + I SSV Sbjct: 120 SQEDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKYESEIKKALD--FDHNDTFILFSSV 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E AI + I Sbjct: 178 TKQGKEEAWAAIEQAI 193 >gi|325576528|ref|ZP_08147281.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus parainfluenzae ATCC 33392] gi|325161218|gb|EGC73332.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus parainfluenzae ATCC 33392] Length = 209 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 105/209 (50%), Gaps = 10/209 (4%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 ++S FL P I +P+ EIAF+GRSN GKS+ +N L N+K+LARTS Sbjct: 5 IMSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKSLARTSK 64 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ +N F P LVD+PGYGYA P+K W + YL +R Sbjct: 65 TPGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEKMKIEWQKSLGEYLQKREC 115 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I Sbjct: 116 LGGLVVLMDIRHPLKDLDQQMIEWAVSADLPVMLLLTKADKLSQSARSKQVKMVREAILP 175 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +V S+ + GI+ L + Sbjct: 176 FQ-GDIQVEAFSAQNKIGIDKLAAKLDSW 203 >gi|320539309|ref|ZP_08038979.1| ribosome biogenesis GTP-binding protein [Serratia symbiotica str. Tucson] gi|320030701|gb|EFW12710.1| ribosome biogenesis GTP-binding protein [Serratia symbiotica str. Tucson] Length = 213 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 4 FVTSAPDIRHLPGDEGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD+PGYGYA P++ W + YL R+ L+ + +L+D RH Sbjct: 64 EEGH---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLQMRNCLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + ++LTK DKL+ + L + + + +V S+ Sbjct: 115 LKDLDQQMIQWAVDVGTPVLVLLTKADKLASGARKAQLNMVREAVLPF-MGDIQVEAFSA 173 Query: 194 VKRKGIEVLRKAI 206 K+ G++ L + + Sbjct: 174 TKKIGVDKLSQKL 186 >gi|294673629|ref|YP_003574245.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella ruminicola 23] gi|294471615|gb|ADE81004.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella ruminicola 23] Length = 200 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 107/202 (52%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F P + PK PE AF GRSNVGKSSLIN+L +KNLA+TS PG+T +N Sbjct: 4 KKAEFTLSAPMESMCPKDTKPEYAFIGRSNVGKSSLINMLTGKKNLAKTSATPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A+ KK V +I Y+ +R L V+LLID Sbjct: 64 HFIINN---------EWYLVDLPGYGFAKRSKKEVQKLEQMINGYILQREQLVNVFLLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R ++ID + ++ +V + I+ TK DKLS + + L K ++ P + Sbjct: 115 IRLEAQKIDLEFMEWMGTSSVPFAIIFTKADKLSASKVLQNLNAYKKVLSETWEELPPIF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS K++G + + I E IN Sbjct: 175 VTSSEKKQGRDEVLDYI-EQIN 195 >gi|255505868|ref|ZP_05348579.3| ribosome biogenesis GTP-binding protein YsxC [Bryantella formatexigens DSM 14469] gi|255265477|gb|EET58682.1| ribosome biogenesis GTP-binding protein YsxC [Bryantella formatexigens DSM 14469] Length = 258 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 106/189 (56%), Gaps = 12/189 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP E+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ + Sbjct: 69 STLPVNDKIEVAFAGKSNVGKSSLINALMNRKALARTSAQPGKTQTINFYNINN------ 122 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 AM LVD+PGYGYA+ + + WG +I RYL + L+ V+LLID RH D+ + Sbjct: 123 ---AMYLVDLPGYGYAKVAQSEKEKWGRMIERYLQKSQMLKAVFLLIDIRHDPSANDKLM 179 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DK+ + Q+ ++ + + VIP S+ ++G + Sbjct: 180 YDWILYNGYEPIIIATKLDKIKRSQVQKQVKAVREGLGMKGGT---VIPFSAETKQGRDE 236 Query: 202 LRKAILETI 210 + + I I Sbjct: 237 IWEMIDAWI 245 >gi|322385236|ref|ZP_08058883.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus cristatus ATCC 51100] gi|321270860|gb|EFX53773.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus cristatus ATCC 51100] Length = 195 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 76/196 (38%), Positives = 97/196 (49%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNFF Sbjct: 11 LLSAANKSHYPQDDIPEIALAGRSNVGKSSFINTLLNRKNLARTSGKPGKTQLLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLTSRDNLRAVVSLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + I SSV Sbjct: 122 SADDVQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESAIKKKLD--FDKTDDFIIFSSV 179 Query: 195 KRKGIEVLRKAILETI 210 + G++ AIL I Sbjct: 180 DKTGLDQAWDAILGKI 195 >gi|291550778|emb|CBL27040.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus torques L2-14] Length = 206 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 112/192 (58%), Gaps = 12/192 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ + Sbjct: 16 SVLPENDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYTINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ ++ WG LI RYL L+ V+LLID RH D+ + Sbjct: 70 ---EMYLVDLPGYGYAKVSEQEKIQWGKLIERYLHTSKQLKAVFLLIDIRHDPSANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + I+ TK+DK+ + Q+ ++ K ++ P +VIP SS ++G + Sbjct: 127 YQWILDQGYQPIIIATKLDKIKRSQVQKHIKMLKTGLQLVPGT--KVIPFSSQTKQGRDE 184 Query: 202 LRKAIL-ETINY 212 + + I E + Y Sbjct: 185 IWELIETEYLGY 196 >gi|69246839|ref|ZP_00604148.1| GTP-binding protein [Enterococcus faecium DO] gi|257878468|ref|ZP_05658121.1| GTP-binding protein [Enterococcus faecium 1,230,933] gi|257882890|ref|ZP_05662543.1| GTP-binding protein [Enterococcus faecium 1,231,502] gi|257889332|ref|ZP_05668985.1| GTP-binding protein [Enterococcus faecium 1,231,410] gi|257894345|ref|ZP_05673998.1| GTP-binding protein [Enterococcus faecium 1,231,408] gi|258616007|ref|ZP_05713777.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium DO] gi|260560057|ref|ZP_05832235.1| GTP-binding protein [Enterococcus faecium C68] gi|261207454|ref|ZP_05922140.1| GTP-binding protein [Enterococcus faecium TC 6] gi|289565865|ref|ZP_06446306.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium D344SRF] gi|293559816|ref|ZP_06676334.1| GTP-binding protein [Enterococcus faecium E1162] gi|293568081|ref|ZP_06679418.1| GTP-binding protein [Enterococcus faecium E1071] gi|294617406|ref|ZP_06697040.1| GTP-binding protein [Enterococcus faecium E1679] gi|294623405|ref|ZP_06702261.1| GTP-binding protein [Enterococcus faecium U0317] gi|314939703|ref|ZP_07846927.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133a04] gi|314942231|ref|ZP_07849083.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133C] gi|314948864|ref|ZP_07852234.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0082] gi|314950806|ref|ZP_07853878.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133A] gi|314993229|ref|ZP_07858608.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133B] gi|314995228|ref|ZP_07860341.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133a01] gi|68195072|gb|EAN09534.1| GTP-binding protein [Enterococcus faecium DO] gi|257812696|gb|EEV41454.1| GTP-binding protein [Enterococcus faecium 1,230,933] gi|257818548|gb|EEV45876.1| GTP-binding protein [Enterococcus faecium 1,231,502] gi|257825692|gb|EEV52318.1| GTP-binding protein [Enterococcus faecium 1,231,410] gi|257830724|gb|EEV57331.1| GTP-binding protein [Enterococcus faecium 1,231,408] gi|260073892|gb|EEW62216.1| GTP-binding protein [Enterococcus faecium C68] gi|260078345|gb|EEW66050.1| GTP-binding protein [Enterococcus faecium TC 6] gi|289162325|gb|EFD10184.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium D344SRF] gi|291589163|gb|EFF20974.1| GTP-binding protein [Enterococcus faecium E1071] gi|291596312|gb|EFF27571.1| GTP-binding protein [Enterococcus faecium E1679] gi|291597171|gb|EFF28366.1| GTP-binding protein [Enterococcus faecium U0317] gi|291606235|gb|EFF35651.1| GTP-binding protein [Enterococcus faecium E1162] gi|313590558|gb|EFR69403.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133a01] gi|313592284|gb|EFR71129.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133B] gi|313597021|gb|EFR75866.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133A] gi|313599003|gb|EFR77848.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133C] gi|313641038|gb|EFS05618.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0133a04] gi|313644737|gb|EFS09317.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus faecium TX0082] Length = 195 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P PEIA +GRSNVGKSS IN L++RKNLARTS PG+TQ LNF++ Sbjct: 9 IISAVAPKQYPDTQLPEIALAGRSNVGKSSFINTLIDRKNLARTSGKPGKTQTLNFYLI- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 A+ VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 68 --------ENALHFVDVPGYGYAKVSKTERAKWGKMIETYLTTRDQLRAVVSLVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + +V TK DK+ + + K + + I SSV Sbjct: 120 SQEDIQMYQFLKYYDIPVIVVATKADKIPRGKWNKHESEIKKALD--FDRNDTFILFSSV 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E AI + I Sbjct: 178 TKQGKEEAWAAIEQAI 193 >gi|194017131|ref|ZP_03055743.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pumilus ATCC 7061] gi|194010999|gb|EDW20569.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pumilus ATCC 7061] Length = 195 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 11/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVKPEQYPSGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYG+A+ K ++WG +I Y++ R L+ V ++D RH Sbjct: 69 DM---------LHFVDVPGYGFAKVSKTEREAWGRMIETYITMREELKAVVQIVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D +++ FL V ++ TK DK+ ++ + K + P+ E++ SS Sbjct: 120 SVDDVNMYEFLKYYGVPVIVIATKADKIPKGKWEKHAKVVKQTLDIAPS--DELVLFSSE 177 Query: 195 KRKGIEVLRKAILETIN 211 +KG + AIL IN Sbjct: 178 TKKGKDEAWNAILAKIN 194 >gi|307244018|ref|ZP_07526137.1| ribosome biogenesis GTP-binding protein YsxC [Peptostreptococcus stomatis DSM 17678] gi|306492542|gb|EFM64576.1| ribosome biogenesis GTP-binding protein YsxC [Peptostreptococcus stomatis DSM 17678] Length = 240 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 109/201 (54%), Gaps = 12/201 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +SA I P G PEIA +GRSNVGKSSLIN L+NR+ ARTS+ PG+T+ Sbjct: 37 IRSAEI-TMSAVSKSQYPAEGIPEIALAGRSNVGKSSLINGLLNRRTFARTSSTPGKTRT 95 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NF++ + VD+PGYGYA+ K D WGG++ RYL +R L ++LL Sbjct: 96 INFYLINN---------EFYFVDLPGYGYAKVSKTEKDKWGGIMERYLEDREELCAIFLL 146 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +D RH DQ ++ ++ +V TK DK++ Q+ + + + Sbjct: 147 VDVRHEPTADDQMMYDWIKHFGYDCVVVATKADKITRGQYQKHEAIIRRTLNM--DKDDK 204 Query: 188 VIPTSSVKRKGIEVLRKAILE 208 V+ TSS K+ G+E L + I++ Sbjct: 205 VVITSSSKKNGLEDLWETIVD 225 >gi|301155454|emb|CBW14920.1| GTP-binding protein [Haemophilus parainfluenzae T3T1] Length = 204 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 104/208 (50%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+K+LARTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKSLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P+K W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEKMKIEWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 GGLVVLMDIRHPLKDLDQQMIEWAVSADLPVMLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V S+ + GI+ L + Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKLAAKLDSW 198 >gi|327404186|ref|YP_004345024.1| GTP-binding protein engB [Fluviicola taffensis DSM 16823] gi|327319694|gb|AEA44186.1| GTP-binding protein engB [Fluviicola taffensis DSM 16823] Length = 204 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 112/199 (56%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ +I L P G PE AF GRSNVGKSSLIN+LV +K++A+TS PG+TQ +N Sbjct: 4 KEAKFIISNTDIKLCPTDGKPEYAFIGRSNVGKSSLINMLVEKKDMAKTSGRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGYA+A K + + W I ++L+ R TL ++LID Sbjct: 64 HFLINN---------EWYLVDLPGYGYAKASKSSRNQWEKFISQFLTRRETLINTFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R ++ID + S+ ++ + + IV TKIDKLS + Q+ L K + Y A P V Sbjct: 115 SRLEPQKIDIEFMSWCAEEQLPFSIVFTKIDKLSSSALQKNLAAYKKEMLKYWEALPPVF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TSS G E + I + Sbjct: 175 TTSSESHFGREKILNYIDQ 193 >gi|323499674|ref|ZP_08104642.1| putative GTP-binding protein EngB [Vibrio sinaloensis DSM 21326] gi|323315275|gb|EGA68318.1| putative GTP-binding protein EngB [Vibrio sinaloensis DSM 21326] Length = 221 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 123 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGF-GGDVSVAAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++VLR + E Sbjct: 182 LKGIGVDVLRSKLDEW 197 >gi|292486522|ref|YP_003529388.1| putative GTP-binding protein engB [Erwinia amylovora CFBP1430] gi|292897760|ref|YP_003537129.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291197608|emb|CBJ44702.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946] gi|291551935|emb|CBA18972.1| probable GTP-binding protein engB [Erwinia amylovora CFBP1430] gi|312170590|emb|CBX78853.1| probable GTP-binding protein engB [Erwinia amylovora ATCC BAA-2158] Length = 212 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+++LARTS PGRTQ +N F Sbjct: 14 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQRSLARTSKTPGRTQLINLFQV 73 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 74 AE---------GYRLVDLPGYGYAEVPEETKLKWQRSLAEYLHDRHCLKGLVVLMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D+ + + + ++LTK DKL+ + L + + + EV SS Sbjct: 125 LKELDRQMVLWAVQSGREVLVLLTKADKLASGARKAQLNAVREEAKTFLGT-VEVELFSS 183 Query: 194 VKRKGIEVLRKAILET 209 +K+ G++ L + + Sbjct: 184 LKKIGVDKLSQKLDSW 199 >gi|310829088|ref|YP_003961445.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium limosum KIST612] gi|308740822|gb|ADO38482.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium limosum KIST612] Length = 193 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 101/193 (52%), Gaps = 11/193 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ PEI GRSNVGKSS IN L+ RK LARTS+ PG+TQ +NF+ Sbjct: 9 VISAVQQSQYPEDNLPEIVLLGRSNVGKSSFINTLIQRKGLARTSSQPGKTQTMNFYKIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D A VDMPGYGYA+ KK + WG +I YL +R + V LL+D RH Sbjct: 69 D---------AFYFVDMPGYGYAKVSKKEREKWGVMIEEYLQKRENMVLVLLLVDSRHEP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ ++ +L + I+ TK DK+S ++ ++ +R P +VI S+ Sbjct: 120 TEDDRLMYDWLTYYGLDPVIIATKADKISKVRQKKAVDNIFNTLR--PRKRSDVILFSAA 177 Query: 195 KRKGIEVLRKAIL 207 + G + + I Sbjct: 178 TKMGKDEAWEVIE 190 >gi|253579812|ref|ZP_04857080.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848811|gb|EES76773.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 201 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 107/188 (56%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PE+AF+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +NF+ + Sbjct: 16 SKLPDTNRPEVAFAGKSNVGKSSLINGLMNRKSLARTSAQPGKTQTINFYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 AM LVD+PGYGYA+ + + WG +I RYL L+ V+LLID RH D+ + Sbjct: 70 ---AMYLVDLPGYGYAKVSQSEKEKWGKMIERYLHTSKNLKAVFLLIDIRHDPSANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DKL + Q+ ++ K ++ +IP S+ ++G + Sbjct: 127 YDWILNNGYEPIIIATKLDKLKRSQVQKNIKAIKEGLKLSKDGI--IIPFSAETKQGRDE 184 Query: 202 LRKAILET 209 + I E Sbjct: 185 IWALIDEL 192 >gi|254282215|ref|ZP_04957183.1| GTP-binding protein EngB [gamma proteobacterium NOR51-B] gi|219678418|gb|EED34767.1| GTP-binding protein EngB [gamma proteobacterium NOR51-B] Length = 229 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + +FL+ ++ P E+AF+GRSN GKSS IN L K LARTS PGRTQ +N+ Sbjct: 18 SAVFLQSASQLENSPDDSGSEVAFAGRSNSGKSSAINTLTGNKKLARTSRTPGRTQLINY 77 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F P LVD+PGYGYA+ P + W + RYL R +LR + LL+D Sbjct: 78 FDVG---------PDRRLVDLPGYGYAKVPLAMKEKWNRELERYLQHRQSLRGLVLLMDI 128 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH ++ D + ++ ++ I+LTK DKL AQ TL K + + ++ V Sbjct: 129 RHPMRDQDDQMINWAATASMPVHILLTKADKLKRGPAQNTLLKLQGQLASF-GGLISVQL 187 Query: 191 TSSVKRKGIEVLRKAILETIN 211 S++K++G++ L K + + Sbjct: 188 FSALKKQGLDSLEKTLNRWLG 208 >gi|89895940|ref|YP_519427.1| hypothetical protein DSY3194 [Desulfitobacterium hafniense Y51] gi|219670373|ref|YP_002460808.1| ribosome biogenesis GTP-binding protein YsxC [Desulfitobacterium hafniense DCB-2] gi|119369191|sp|Q24SK9|ENGB_DESHY RecName: Full=Probable GTP-binding protein EngB gi|254783194|sp|B8FVH0|ENGB_DESHD RecName: Full=Probable GTP-binding protein EngB gi|89335388|dbj|BAE84983.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219540633|gb|ACL22372.1| small GTP-binding protein domain protein [Desulfitobacterium hafniense DCB-2] Length = 201 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 11/200 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ I P+ PEIA +GRSNVGKSSLIN +NR+NLART N PG+TQ LNF Sbjct: 6 KAEFVTSAVNIKGYPELTGPEIALAGRSNVGKSSLINKFINRRNLARTGNTPGKTQMLNF 65 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + D + VD+PGYGYA+ K+ +WG ++ Y S R LR V ++D Sbjct: 66 YRIND---------QWSFVDLPGYGYAKVSKEIKANWGKMMEEYFSRRENLRAVIQVVDI 116 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH DQ++ +FL + + +V TK DK+S + L + + + P H +I Sbjct: 117 RHVPSVEDQEMHAFLRNRGIPVLVVATKADKISKGQWGKHLSQIAKAL-HIPDWHI-IIT 174 Query: 191 TSSVKRKGIEVLRKAILETI 210 S+ G+ L +A+ E + Sbjct: 175 YSAETGLGVPELHEAVEEIL 194 >gi|15615611|ref|NP_243915.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus halodurans C-125] gi|13124217|sp|Q9K8F7|ENGB_BACHD RecName: Full=Probable GTP-binding protein EngB gi|10175671|dbj|BAB06768.1| GTP-binding protein [Bacillus halodurans C-125] Length = 194 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P + PE+A +GRSNVGKSS IN ++NRK LARTS PG+TQ LNF+ D Sbjct: 12 AVKPEQYPNSPLPEVALAGRSNVGKSSFINKMINRKKLARTSQRPGKTQTLNFYNINDI- 70 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + VD+PGYG+A+ KK+ ++WG +I YL +R L+ V +ID RH + Sbjct: 71 --------LHFVDVPGYGFAKVSKKDREAWGRMIETYLQQRGQLKAVLQIIDIRHDPTKD 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ ++ +L + I+ TK DK+ + ++ ++ ++ SS Sbjct: 123 DQLMYDWLKHFEIPVIIIATKCDKIPKGKWPKHVKNIASVLEK--DGGDPIVIFSSETGV 180 Query: 198 GIEVLRKAILETI 210 G + KAIL I Sbjct: 181 GKDEAWKAILHAI 193 >gi|306833688|ref|ZP_07466815.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus bovis ATCC 700338] gi|304424458|gb|EFM27597.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus bovis ATCC 700338] Length = 213 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 97/196 (49%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ Sbjct: 29 LLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNID 88 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL R LR V L+D RH Sbjct: 89 D---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDLRHEP 139 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + I SSV Sbjct: 140 SADDVQMYDFLKYYEIPVIVVATKADKIPRGKWNKHESAIKKKLN--FNKSDKFIIFSSV 197 Query: 195 KRKGIEVLRKAILETI 210 R G++ +IL+ + Sbjct: 198 DRTGLDESWDSILDEL 213 >gi|262273192|ref|ZP_06051008.1| GTP-binding protein EngB [Grimontia hollisae CIP 101886] gi|262222770|gb|EEY74079.1| GTP-binding protein EngB [Grimontia hollisae CIP 101886] Length = 217 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS IN L ++KNL +TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPPDTGIEVAFAGRSNAGKSSSINRLCDQKNLVKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ P + W + YL +R L+ + +L+D RH Sbjct: 72 DE---------GCHIVDLPGYGYAQVPLEMKKKWQKSLGEYLQKRDQLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++DQD+ + + +LTK DKL + L K + +++ EV SS Sbjct: 123 LKELDQDLIFWAVDCNLPVLALLTKCDKLKSGARKAELLKVREAAKDF-GGDVEVELFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR+ + Sbjct: 182 LKGIGVDKLRQKLDSW 197 >gi|227540053|ref|ZP_03970102.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300] gi|227240069|gb|EEI90084.1| GTP-binding protein [Sphingobacterium spiritivorum ATCC 33300] Length = 207 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 106/202 (52%), Gaps = 13/202 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + LP PE AF GRSNVGKSSLIN + N+K LA+TS PG+TQ +N Sbjct: 4 KKAEFVCSNTRVDKLPDPTLPEYAFIGRSNVGKSSLINAMTNKKGLAKTSQKPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ D LVD+PGYG+A+ K N W I RYL+ R L+CV++LID Sbjct: 64 HFIIND---------EWFLVDLPGYGFAQTSKTNRSEWQKFIRRYLTHRDNLQCVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID D +L + + + +V TK DK S + + K + + + P Sbjct: 115 SRHEPQKIDLDFCCWLGECGLPFMLVFTKADKQSAVKSDVNIAKFRKSLLQWFEEVPPHF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TS+ + G E ILE IN Sbjct: 175 LTSAEAKTGCEP----ILEMIN 192 >gi|259906707|ref|YP_002647063.1| ribosome biogenesis GTP-binding protein YsxC [Erwinia pyrifoliae Ep1/96] gi|224962329|emb|CAX53784.1| Probable GTP-binding protein EngB [Erwinia pyrifoliae Ep1/96] gi|283476490|emb|CAY72305.1| probable GTP-binding protein engB [Erwinia pyrifoliae DSM 12163] gi|310765930|gb|ADP10880.1| ribosome biogenesis GTP-binding protein YsxC [Erwinia sp. Ejp617] Length = 209 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+++LARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQRSLARTSKTPGRTQLINLFQV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P++ W + YL +R L+ + +L+D RH Sbjct: 71 AE---------GYRLVDLPGYGYAEVPEETKLKWQRSLAEYLHDRHCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D+ + + + ++LTK DKL+ + L + + + EV SS Sbjct: 122 LKELDRQMVLWAVQSGREVLVLLTKADKLASGARKAQLNAVREEAKTFLGT-VEVELFSS 180 Query: 194 VKRKGIEVLRKAILET 209 +K+ G++ L + + Sbjct: 181 LKKIGVDKLSQKLDSW 196 >gi|71897603|ref|ZP_00679848.1| GTP-binding protein [Xylella fastidiosa Ann-1] gi|71732506|gb|EAO34559.1| GTP-binding protein [Xylella fastidiosa Ann-1] Length = 219 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 9/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L I LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 26 YLLSAHTIHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTV 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P LVD+PGYGYA+ PK+ W I Y R +LR + +++D RH Sbjct: 86 T---------PQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHP 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D + ++ ++ + Q +LTK DKL +TL+K + + + H + SS Sbjct: 137 LKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSS 196 Query: 194 VKRKGIEVLRKAILETIN 211 R+G+E L I + Sbjct: 197 KSRQGVEQLHTVIETWLG 214 >gi|311696218|gb|ADP99091.1| GTP-binding protein EngB [marine bacterium HP15] Length = 215 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ FL + P E+AF+GRSN GKSS +N + LARTS PGRT+ +N Sbjct: 13 NSARFLISASRLDECPPDFGAEVAFAGRSNAGKSSALNAITANGKLARTSKTPGRTRLIN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF +VD+PGYGYA+ + D W + YL++R LR + L++D Sbjct: 73 FFSLN--------RENCRMVDLPGYGYAKVSRDMKDDWQKHLGHYLNDRRCLRGLVLVMD 124 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + DQ + + + + I+ TK DKL A+ + +++Y + +I Sbjct: 125 IRHPLTDFDQMMVEWCEHNNLPLMILATKADKLKYGQAKTAMLGIAKNLKSY-SCVEHLI 183 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ ++G++ R+A++E + Sbjct: 184 MFSATSKRGVDECREALIEWL 204 >gi|153814162|ref|ZP_01966830.1| hypothetical protein RUMTOR_00371 [Ruminococcus torques ATCC 27756] gi|331087817|ref|ZP_08336742.1| GTP-binding protein engB [Lachnospiraceae bacterium 3_1_46FAA] gi|145848558|gb|EDK25476.1| hypothetical protein RUMTOR_00371 [Ruminococcus torques ATCC 27756] gi|330409512|gb|EGG88953.1| GTP-binding protein engB [Lachnospiraceae bacterium 3_1_46FAA] Length = 202 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 76/191 (39%), Positives = 112/191 (58%), Gaps = 12/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ D Sbjct: 16 STLPENDKPEVAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYAR +K + WG +I RYL L+ V+LLID RH D+ + Sbjct: 70 ---EMYLVDLPGYGYARVSEKEKEQWGRMIERYLHSSKQLKAVFLLIDIRHDPSANDRMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ ++ I+ TK+DK+ + Q+ ++ K + P +V+P SSV ++G E Sbjct: 127 YQWIVEQGYHPIIIATKLDKIKRSQIQKHVKMLKQGLDLVPGT--KVLPFSSVSKQGKED 184 Query: 202 LRKAI-LETIN 211 + + I E N Sbjct: 185 IWELIEAECFN 195 >gi|306831537|ref|ZP_07464695.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426322|gb|EFM29436.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 213 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 97/196 (49%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PEIA +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ Sbjct: 29 LLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNFYNID 88 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL R LR V L+D RH Sbjct: 89 D---------KLRFVDVPGYGYAKVSKSERAKWGKMIEEYLVSRDNLRAVVSLVDFRHDP 139 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + K + + I SSV Sbjct: 140 SADDVQMYDFLKYYEIPVIVVATKADKIPRGKWNKHESAIKKKLN--FDKSDKFIIFSSV 197 Query: 195 KRKGIEVLRKAILETI 210 R G++ +IL+ + Sbjct: 198 DRTGLDESWDSILDEL 213 >gi|296115060|ref|ZP_06833702.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter hansenii ATCC 23769] gi|295978397|gb|EFG85133.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter hansenii ATCC 23769] Length = 235 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 119/204 (58%), Gaps = 9/204 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + F+ G ++G LP PEIAF+GRSNVGKSSL+N L R+ LAR S+ PGRT Sbjct: 33 LLFAGECQFVFGAQKLGQLPDPLLPEIAFAGRSNVGKSSLVNALTGRRTLARASSEPGRT 92 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + LNFF + LVDMPGYG+A+A K + W G++ +L R TL+ V Sbjct: 93 KQLNFFELA---------GRLTLVDMPGYGFAKAAKAVKEDWQGMMFSFLRGRPTLKRVV 143 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LL+D R +K+ D+++ LD+ AV++QIVLTK D P L +T+ + ++ A+ Sbjct: 144 LLLDSRVEIKESDREIMKLLDRAAVTFQIVLTKCDIPKPPVLAAKLRETREIAASHAAAY 203 Query: 186 PEVIPTSSVKRKGIEVLRKAILET 209 P V+ TSS +GI LR + + Sbjct: 204 PLVLVTSSANGEGIVELRAELAQL 227 >gi|71274790|ref|ZP_00651078.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Dixon] gi|71901070|ref|ZP_00683179.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Ann-1] gi|170729963|ref|YP_001775396.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa M12] gi|71164522|gb|EAO14236.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Dixon] gi|71729152|gb|EAO31274.1| GTP-binding protein, HSR1-related [Xylella fastidiosa Ann-1] gi|167964756|gb|ACA11766.1| GTP-binding protein [Xylella fastidiosa M12] Length = 219 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 107/211 (50%), Gaps = 13/211 (6%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M S + K +L I LP E+AF+GRSN GKSS++N L + LAR S Sbjct: 17 MSSPLEYAK----YLLSAHTIHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSK 72 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ L +F P LVD+PGYGYA+ PK+ W I Y +R Sbjct: 73 TPGRTQQLVYFTVT---------PQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQA 123 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR + +++D RH +K+ D + ++ ++ + Q +LTK DKL +TL+K + + Sbjct: 124 LRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTK 183 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + H ++ SS R+G+E L I + Sbjct: 184 HFADHIDIQTFSSKSRQGVEQLHTVIETWLG 214 >gi|254508264|ref|ZP_05120387.1| GTP-binding protein [Vibrio parahaemolyticus 16] gi|219548781|gb|EED25783.1| GTP-binding protein [Vibrio parahaemolyticus 16] Length = 225 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 16 FITSAPDIRALPADEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFKV 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 76 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRQSLKGLVVLMDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 127 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGF-GGDVSVAAFSS 185 Query: 194 VKRKGIEVLRKAILET 209 +K G++ LR + E Sbjct: 186 LKGIGVDTLRNKLDEW 201 >gi|119899112|ref|YP_934325.1| ribosome biogenesis GTP-binding protein YsxC [Azoarcus sp. BH72] gi|166225940|sp|A1K9D3|ENGB_AZOSB RecName: Full=Probable GTP-binding protein EngB gi|119671525|emb|CAL95438.1| conserved hypothetical GTP-binding protein [Azoarcus sp. BH72] Length = 209 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 11/206 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F + F + + LP EIAF+GRSN GKSS IN L LA S PGR Sbjct: 2 PLFRNA--QFEISIAKPSGLPPPNGAEIAFAGRSNAGKSSAINTLAGHVRLAYVSKTPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +NFF LVD+PGYGYA P+K W GLI YL R +L + Sbjct: 60 TQLINFFRLN---------CGALLVDLPGYGYAAVPEKIRRQWQGLIETYLRTRESLIGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D RH + +D+ + + ++LTK DKLS A TL + + Sbjct: 111 VLMMDSRHPMTDLDRQMIDWFAPSGKPIHVLLTKSDKLSRGPANATLLAVRAELTARYGD 170 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 V SS+K+ G+E + K + + Sbjct: 171 QVSVQLFSSLKKTGVEEVEKVVAGWL 196 >gi|332884603|gb|EGK04860.1| GTP-binding protein engB [Dysgonomonas mossii DSM 22836] Length = 201 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 111/202 (54%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + P+ G PE AF GRSNVGKSSLIN+L NRK LA TS+ PG+TQ +N Sbjct: 4 KDAQFVISNTDYRKCPQDGKPEYAFIGRSNVGKSSLINMLTNRKGLAMTSSKPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGYA+ K + +I Y+ +R+ L C++LL+D Sbjct: 64 HFIINN---------EWYLVDLPGYGYAQRGKDGREQIRKIIDNYILKRTELTCLFLLLD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 CRH ++ID D ++L ++ + + IV TK DK+S ++ E + P + Sbjct: 115 CRHEPQKIDLDFINWLGEEGIPFVIVFTKTDKISKGRLKDNSEAYINKLHETWEEIPTIF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS +R G + + I + IN Sbjct: 175 YTSSEQRAGGDEILDYI-DNIN 195 >gi|157693221|ref|YP_001487683.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pumilus SAFR-032] gi|166920109|sp|A8FFV6|ENGB_BACP2 RecName: Full=Probable GTP-binding protein EngB gi|157681979|gb|ABV63123.1| possible GTPase [Bacillus pumilus SAFR-032] Length = 195 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 11/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P G PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVKPEQYPSGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYG+A+ K ++WG +I Y++ R L+ V ++D RH Sbjct: 69 DM---------LHFVDVPGYGFAKVSKTEREAWGRMIETYITMREELKAVVQIVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D +++ FL V ++ TK DK+ ++ + K + P+ E++ SS Sbjct: 120 SVDDVNMYEFLKYYGVPVIVIATKADKIPKGKWEKHAKVVKQTLDIAPS--DELVLFSSE 177 Query: 195 KRKGIEVLRKAILETIN 211 +KG + AIL IN Sbjct: 178 TKKGKDEAWNAILAKIN 194 >gi|223984579|ref|ZP_03634706.1| hypothetical protein HOLDEFILI_02002 [Holdemania filiformis DSM 12042] gi|223963426|gb|EEF67811.1| hypothetical protein HOLDEFILI_02002 [Holdemania filiformis DSM 12042] Length = 200 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 12/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P P++ PEI +GRSNVGKSSLIN L RK LA N PG+T+ LNFF Sbjct: 9 VVSAPSKAHWPESELPEIVLAGRSNVGKSSLINTLCGRKALAYVGNTPGKTRLLNFFDID 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 VD+PGYG+A A K+ + +G ++ Y S RS L+ + LL+D RH Sbjct: 69 HR---------FMFVDVPGYGFANASKQMLIQFGEMMEDYFSSRSQLKGLILLVDMRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + + + + + TK+DK+ + + + + P A +IP SS+ Sbjct: 120 TEDDITMADYARYYEIPFVVAATKLDKVPRSQQSKQINVIAKALACAPEA---IIPFSSI 176 Query: 195 KRKGIEVLRKAILETIN 211 ++G E L +AI N Sbjct: 177 TKQGREELLEAIDALFN 193 >gi|260589154|ref|ZP_05855067.1| ribosome biogenesis GTP-binding protein YsxC [Blautia hansenii DSM 20583] gi|331082570|ref|ZP_08331695.1| GTP-binding protein engB [Lachnospiraceae bacterium 6_1_63FAA] gi|260540574|gb|EEX21143.1| ribosome biogenesis GTP-binding protein YsxC [Blautia hansenii DSM 20583] gi|330400548|gb|EGG80178.1| GTP-binding protein engB [Lachnospiraceae bacterium 6_1_63FAA] Length = 201 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 75/189 (39%), Positives = 110/189 (58%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +LP+ PEIAF+G+SNVGKSSLIN L+NRK+LARTS +PG+TQ +NF+ Sbjct: 16 SILPENEVPEIAFAGKSNVGKSSLINALMNRKSLARTSASPGKTQTINFYNVNH------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ + + WG LI RYL + L+ V+LLID RH + D+ + Sbjct: 70 ---EMYLVDLPGYGYAKVSQSVKEQWGKLIERYLHKSKQLKAVFLLIDIRHKPSENDKTM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK DKL + Q+ L+ K + A ++IP S+ ++G E Sbjct: 127 YDWIVYNGYQPIIIATKSDKLKRSQIQKQLKIIKEGLELPKGA--QIIPFSAQTKQGREE 184 Query: 202 LRKAILETI 210 + E + Sbjct: 185 IWALAEELL 193 >gi|219856299|ref|YP_002473421.1| hypothetical protein CKR_2956 [Clostridium kluyveri NBRC 12016] gi|219570023|dbj|BAH08007.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 201 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 11/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ PK EIAF GRSNVGKSSLIN L NRK L + S PG+T+ +NFF+ Sbjct: 12 FIISAVHPSQYPKDKRIEIAFVGRSNVGKSSLINALTNRKKLVKVSGTPGKTRLINFFLI 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA+ K SWG ++ YL R L+ V LL+DCRH Sbjct: 72 NN---------EFYFVDLPGYGYAKISKTEKKSWGKVVEDYLRGREELKRVILLLDCRHK 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ +L + IV TK+DK+S + + L+ K ++ P E++ SS Sbjct: 123 PTNDDITMYKWLKYYNYNTIIVATKVDKVSKSQLFKNLKIIKDTLK--PETGDEILTFSS 180 Query: 194 VKRKGIEVLRKAILETINY 212 + ++G E K + I++ Sbjct: 181 LNKQGKEEFLKVLESVIDF 199 >gi|259046800|ref|ZP_05737201.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella adiacens ATCC 49175] gi|259036568|gb|EEW37823.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella adiacens ATCC 49175] Length = 199 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 103/201 (51%), Gaps = 11/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F P PEIA SGRSNVGKSS IN L+ RK+LARTS+ PG+TQ LN Sbjct: 4 NKAEFTISAVSPAQYPAGDLPEIALSGRSNVGKSSFINKLIQRKSLARTSSKPGKTQTLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + VD+PGYGYA+ KK + WG +I Y++ R +LR V +L+D Sbjct: 64 FYHINEL---------FYFVDVPGYGYAKVSKKEREKWGKMIEEYITTRQSLRLVLILVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH Q D + FL+ + Y+IV+TK DK+ + + + P + Sbjct: 115 FRHEPSQEDVQMREFLEYYNIPYRIVMTKCDKIPRGKWNKHVSVIRKAFGKPPEDL--FL 172 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS +G+E K I + I Sbjct: 173 TFSSETGEGVEKAWKFIEQFI 193 >gi|295397567|ref|ZP_06807646.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus viridans ATCC 11563] gi|294974191|gb|EFG49939.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus viridans ATCC 11563] Length = 201 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 11/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P PEIA +GRSNVGKSS IN ++NRK LARTS+ PG+TQ LN++ Sbjct: 8 FLISAVRPEQYPAPIIPEIALAGRSNVGKSSFINTMINRKKLARTSSKPGKTQQLNYYQI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D VD+PGYGYAR K WG ++ Y + R L L++D RH Sbjct: 68 EDL---------FYFVDVPGYGYARVSKTEKAKWGEMLETYFATRENLALALLIVDFRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + F+D V Y ++ TK DK+ + + L + + +++P S+ Sbjct: 119 PTKDDIQMKEFMDYHGVPYFVIATKTDKIKKSQWNKHLSDIYKTLE--LESIDQILPFSA 176 Query: 194 VKRKGIEVLRKAILETIN 211 + G + + I ++ Sbjct: 177 ETKDGRDEAWEVIQAVLD 194 >gi|297537482|ref|YP_003673251.1| ribosome biogenesis GTP-binding protein YsxC [Methylotenera sp. 301] gi|297256829|gb|ADI28674.1| ribosome biogenesis GTP-binding protein YsxC [Methylotenera sp. 301] Length = 222 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 15/210 (7%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F +A F + LP A E+AF+GRSN GKSS +N L N LA S PGR Sbjct: 2 PLFQNAA--FFISAHHLRDLPPASGIEVAFAGRSNAGKSSALNTLANHNRLAFVSKQPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +NFF + LVD+PGYGYA+ P+ W ++ RYL ERS+L + Sbjct: 60 TQLINFFTLGNDR---------HLVDLPGYGYAKVPEAMRAHWQNVLARYLGERSSLGGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D RH + +D+ + ++ ++LTK DKLS A TL + + + Sbjct: 111 VLVMDSRHPLTPLDRQMLNWFCPSGKPVHVLLTKSDKLSRGEASLTLNRVRKELVETWGN 170 Query: 185 HPE----VIPTSSVKRKGIEVLRKAILETI 210 H + SS+K++G+E I + + Sbjct: 171 HYHSECTIQLFSSLKKQGVEEAEAVIGKWL 200 >gi|25011424|ref|NP_735819.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus agalactiae NEM316] gi|81845601|sp|Q8E4L9|ENGB_STRA3 RecName: Full=Probable GTP-binding protein EngB gi|24412962|emb|CAD47041.1| unknown [Streptococcus agalactiae NEM316] Length = 198 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 101/210 (48%), Gaps = 12/210 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + T +A I L P+ PE+A +GRSNVGKSS IN L+ RKNLARTS+ Sbjct: 1 MAEEFLNTHNASILL-SAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSS 59 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNF+ D + VD+PGYGYA+ K WG +I YL R Sbjct: 60 KPGKTQLLNFYNIDD---------KLRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDN 110 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V L+D RH D ++ FL + IV TK DK+ + K + Sbjct: 111 LRVVVSLVDFRHDPSADDIQIYEFLKYYEIPVIIVATKADKIPRGKWNKHESSIKKKLNF 170 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 H I SSV R G++ IL + Sbjct: 171 DKKDH--FIVFSSVDRTGLDESWDTILSEL 198 >gi|197302447|ref|ZP_03167502.1| hypothetical protein RUMLAC_01175 [Ruminococcus lactaris ATCC 29176] gi|197298345|gb|EDY32890.1| hypothetical protein RUMLAC_01175 [Ruminococcus lactaris ATCC 29176] Length = 200 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 76/191 (39%), Positives = 111/191 (58%), Gaps = 12/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ D Sbjct: 16 SVLPENDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ ++ WG LI RYL LR V+LLID RH D+ + Sbjct: 70 ---EMYLVDLPGYGYAKVSEQEKAQWGKLIERYLHTSGQLRAVFLLIDIRHAPSANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ ++ I+ TK+DK+ + Q+ ++ K + P +VIP SS ++G + Sbjct: 127 YHWIVEQGYQPIIIATKLDKIKRSQVQKCIKILKEGLELVPGT--KVIPFSSQTKQGRDE 184 Query: 202 LRKAIL-ETIN 211 + I E +N Sbjct: 185 IWDLIETEYLN 195 >gi|85710995|ref|ZP_01042056.1| GTP-binding protein [Idiomarina baltica OS145] gi|85695399|gb|EAQ33336.1| GTP-binding protein [Idiomarina baltica OS145] Length = 225 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 10/209 (4%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 +VS F+ P I LP+ EIAF+GRSN GKSS +N L ++NLARTS Sbjct: 10 VVSEKRINYQTATFITSAPNIRKLPEDSGIEIAFAGRSNAGKSSALNTLTRQRNLARTSK 69 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ +N F L+D+PGYG+A+ P + + W + YL +R + Sbjct: 70 TPGRTQLINVFETA---------TGQRLIDLPGYGFAKVPMEVKEQWQRSLSEYLEKRDS 120 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ + +L+D RH ++ DQ++ + + +LTK DKL + TL K + Sbjct: 121 LKGLVVLMDIRHPFRETDQELIYWAVDCGIPVLALLTKADKLKQGARKSTLLKARQAAIA 180 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +V SS+K+ GI+ L + + Sbjct: 181 F-NGDVQVEVFSSLKKFGIDQLENKLDQW 208 >gi|253751620|ref|YP_003024761.1| GTP-binding protein [Streptococcus suis SC84] gi|253753522|ref|YP_003026663.1| GTP-binding protein [Streptococcus suis P1/7] gi|253755653|ref|YP_003028793.1| GTP-binding protein [Streptococcus suis BM407] gi|251815909|emb|CAZ51523.1| putative GTP-binding protein [Streptococcus suis SC84] gi|251818117|emb|CAZ55911.1| putative GTP-binding protein [Streptococcus suis BM407] gi|251819768|emb|CAR45667.1| putative GTP-binding protein [Streptococcus suis P1/7] gi|319758058|gb|ADV70000.1| GTP-binding protein [Streptococcus suis JS14] Length = 195 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 94/196 (47%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P PEIA +GRSNVGKSS IN L+ RKNLARTS PG+TQ LNF+ Sbjct: 11 LLSAVSKAQYPGYDIPEIALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQQLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 71 D---------KIRFVDVPGYGYAKVSKTERAKWGKMIEEYLTTRENLRVVVSLVDMRHEP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + + + + SS Sbjct: 122 SADDVQMYDFLKYYEIPVIIVATKADKIPRGKWNKHESMIKKKLD--FDKNDQFVIFSSE 179 Query: 195 KRKGIEVLRKAILETI 210 R G + AIL I Sbjct: 180 TRHGYDQAWDAILSNI 195 >gi|315641096|ref|ZP_07896175.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus italicus DSM 15952] gi|315483104|gb|EFU73621.1| ribosome biogenesis GTP-binding protein YsxC [Enterococcus italicus DSM 15952] Length = 222 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 102/198 (51%), Gaps = 11/198 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P++ PEIA +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LNF+ + Sbjct: 34 VISAVSPAQYPESELPEIALAGRSNVGKSSFINTLIERKNLARTSSKPGKTQTLNFYNIE 93 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL++RS L+ V L+D RH Sbjct: 94 D---------VLHFVDVPGYGYAKVSKTERAKWGKMIETYLTQRSQLKAVVSLVDFRHEP 144 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TKIDK+ + K + I SSV Sbjct: 145 SVEDVQMYQFLKYYDIPVIVVATKIDKIPRGKWNKHESMIKKAM--TFEKEDTFILFSSV 202 Query: 195 KRKGIEVLRKAILETINY 212 + G ++ AI + I Y Sbjct: 203 TKDGKQLAWNAIEKAIGY 220 >gi|292558275|gb|ADE31276.1| GTP-binding protein domain containing protein [Streptococcus suis GZ1] Length = 206 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 94/196 (47%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P PEIA +GRSNVGKSS IN L+ RKNLARTS PG+TQ LNF+ Sbjct: 22 LLSAVSKAQYPGYDIPEIALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQQLNFYNID 81 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG +I YL+ R LR V L+D RH Sbjct: 82 D---------KIRFVDVPGYGYAKVSKTERAKWGKMIEEYLTTRENLRVVVSLVDMRHEP 132 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + + + + SS Sbjct: 133 SADDVQMYDFLKYYEIPVIIVATKADKIPRGKWNKHESMIKKKLD--FDKNDQFVIFSSE 190 Query: 195 KRKGIEVLRKAILETI 210 R G + AIL I Sbjct: 191 TRHGYDQAWDAILSNI 206 >gi|149192614|ref|ZP_01870766.1| GTPase EngB [Vibrio shilonii AK1] gi|148833550|gb|EDL50635.1| GTPase EngB [Vibrio shilonii AK1] Length = 244 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 10/189 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N L N++ LA+TS PGRTQ +N F Sbjct: 41 FITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQRALAKTSKTPGRTQLINLFKV 100 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 101 DE---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRKCLKGLVVLMDIRHP 151 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + Q++LTK DKL + + K + + +V SS Sbjct: 152 MKDLDQQLIQWAVESHIPVQVLLTKADKLKSGARKAQVLKIREAALAF-GGDVQVDAFSS 210 Query: 194 VKRKGIEVL 202 +K G++ L Sbjct: 211 LKGIGVDQL 219 >gi|116333988|ref|YP_795515.1| GTPase EngB [Lactobacillus brevis ATCC 367] gi|122269328|sp|Q03QN8|ENGB_LACBA RecName: Full=Probable GTP-binding protein EngB gi|116099335|gb|ABJ64484.1| Predicted GTPase [Lactobacillus brevis ATCC 367] Length = 197 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 101/193 (52%), Gaps = 11/193 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P G PEIA GRSNVGKSSL N+L+NR + ARTS+ PG+TQ LNF+ + Sbjct: 9 VMSAVDPAQYPTTGYPEIALVGRSNVGKSSLTNVLINRNSYARTSSQPGKTQTLNFYNVE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K + WG +I YL++R LR V L+D RH Sbjct: 69 D---------QLYFVDVPGYGYAKVSKTEREKWGQMIETYLTQRDQLRGVISLVDARHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ +L + IV TK DK++ + + + K + ++ S+ Sbjct: 120 TEDDIQMYRWLAYYELPTLIVATKSDKIARGKWNQAVSQIKKSLE--LPNTDNIVMFSAP 177 Query: 195 KRKGIEVLRKAIL 207 K+ G + + I Sbjct: 178 KKMGKDAVWNWIE 190 >gi|28378737|ref|NP_785629.1| GTPase EngB [Lactobacillus plantarum WCFS1] gi|254556940|ref|YP_003063357.1| GTPase EngB [Lactobacillus plantarum JDM1] gi|300768255|ref|ZP_07078160.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180929|ref|YP_003925057.1| GTPase EngB [Lactobacillus plantarum subsp. plantarum ST-III] gi|38257507|sp|Q88VE3|ENGB_LACPL RecName: Full=Probable GTP-binding protein EngB gi|28271574|emb|CAD64479.1| GTP-binding protein [Lactobacillus plantarum WCFS1] gi|254045867|gb|ACT62660.1| GTPase EngB [Lactobacillus plantarum JDM1] gi|300494319|gb|EFK29482.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046420|gb|ADN98963.1| GTPase EngB [Lactobacillus plantarum subsp. plantarum ST-III] Length = 197 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P G PEI +GRSNVGKSSLIN+L+NR + ARTS+ PG+TQ LNF+ + Sbjct: 9 VMSAVAPSQYPTTGFPEIGLAGRSNVGKSSLINVLINRNSYARTSSQPGKTQTLNFYKVE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ KK + WG +I YL+ R TLR V +L+D RH Sbjct: 69 D---------QLYFVDVPGYGYAKVSKKEREKWGQMIETYLTSRETLRGVVILVDARHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ ++ + +V TK DK+ + K + A + I S+ Sbjct: 120 TKDDVAMYEWMRYYEMPLLVVATKSDKIPRGKWNKQESLIKKTLN--FQAEDDFIAFSAK 177 Query: 195 KRKGIEVLRKAIL 207 ++G + + + I Sbjct: 178 TKEGKDAVWQWIE 190 >gi|114322004|ref|YP_743687.1| cell division checkpoint GTPase YihA [Alkalilimnicola ehrlichii MLHE-1] gi|119368788|sp|Q0A4P0|ENGB_ALHEH RecName: Full=Probable GTP-binding protein EngB gi|114228398|gb|ABI58197.1| cell division checkpoint GTPase YihA [Alkalilimnicola ehrlichii MLHE-1] Length = 206 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 12/208 (5%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 + I+ ++ FL P++ +P E+AF+GRSNVGKSS IN L N+K+LARTS PG Sbjct: 2 NPIYFQA--RFLTSAPDLRRMPPDQGREVAFAGRSNVGKSSAINTLTNQKSLARTSKTPG 59 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ +N F D ALVD+PGYGYA+ P W ++ YL+ R LR Sbjct: 60 RTQLINVFPITD---------EAALVDLPGYGYAKVPAAVRRRWDQVLPEYLAGRRALRG 110 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 V L++D RH + D+ + + V ++LTK DK A+ + +R Sbjct: 111 VVLVMDLRHPLTDFDRQMLDWCGHIGVPLHVLLTKADKFKAGAARNRGQNVGRQLRAEWP 170 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETIN 211 S+ KR G++ + E + Sbjct: 171 G-VTWQIFSASKRMGVDEAHARLDEWLG 197 >gi|329124154|ref|ZP_08252701.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus aegyptius ATCC 11116] gi|327467579|gb|EGF13077.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus aegyptius ATCC 11116] Length = 205 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL P I +P+ EIAF+GRSN GKS+ +N L N+KNL RTS Sbjct: 1 MSEIKLNYHKTHFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLTRTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNYKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 AGLVVLMDIRHPLKDLDQQMIEWAVSANLPILLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 +V S+ + GI+ L + Sbjct: 172 Q-GDIQVEAFSAQNKIGIDKLAAKL 195 >gi|120556475|ref|YP_960826.1| GTP-binding protein, HSR1-related [Marinobacter aquaeolei VT8] gi|120326324|gb|ABM20639.1| cell division checkpoint GTPase YihA [Marinobacter aquaeolei VT8] Length = 214 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ FL ++ P E+AF+GRSN GKSS +N + LARTS PGRT+ +N Sbjct: 13 NSARFLISASKLDECPPDHGAEVAFAGRSNAGKSSALNAITANGKLARTSKTPGRTRLIN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF LVD+PGYGYA+ + D W + YL++R LR + L++D Sbjct: 73 FFSLN--------REHARLVDLPGYGYAKVSRDMKDDWQQHLGHYLNDRRCLRGLVLVMD 124 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + DQ + + + + I+ TK DKL A+ + ++ Y +I Sbjct: 125 IRHPLTDFDQMMVEWCEHNHLPLMILATKADKLKFGQAKTAMLGIAKKLKEYQ-CVEHLI 183 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ ++G++ R+A+ + Sbjct: 184 MFSATSKRGVDECREALTHWL 204 >gi|260771615|ref|ZP_05880535.1| GTP-binding protein EngB [Vibrio metschnikovii CIP 69.14] gi|260613392|gb|EEX38591.1| GTP-binding protein EngB [Vibrio metschnikovii CIP 69.14] Length = 218 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L N+K+LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPADDGIEIAFAGRSNAGKSSALNRLTNQKSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +RS+L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQQRSSLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + A+ Q++LTK DKL + L K + ++ V SS Sbjct: 123 MKDLDQQLVLWAVECAIPVQVLLTKADKLKSGARKAQLNKIREESLSF-GGDVSVDVYSS 181 Query: 194 VKRKGIEVLRKAILET 209 + G++ LR + Sbjct: 182 LNGLGVDTLRSKLDSW 197 >gi|33151575|ref|NP_872928.1| GTPase EngB [Haemophilus ducreyi 35000HP] gi|71151867|sp|Q7VNY0|ENGB_HAEDU RecName: Full=Probable GTP-binding protein EngB gi|33147795|gb|AAP95317.1| conserved possible cell division GTP-binding protein [Haemophilus ducreyi 35000HP] Length = 210 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P+I LP+ EIAF+GRSN GKS+ +N L N+K+LARTS PGRTQ +N Sbjct: 11 HKTRFLTSAPDIRHLPEDNGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLIN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F P LVD+PGYGYA P++ W + YL +R L + +L+D Sbjct: 71 LFEV---------EPQCKLVDLPGYGYAAVPEQMKLQWQKALGEYLQKRDCLAGIVILMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + ++LTK DKLS +T + I + +V Sbjct: 122 IRHPLKDLDQQMIEWAVSAQLPVLLLLTKADKLSQVARNKTAKMVNEAILPFQ-GDIQVE 180 Query: 190 PTSSVKRKGIEVLRKAILET 209 S++ + G++ L + Sbjct: 181 IYSALNKIGVDKLSNKLDSW 200 >gi|317129824|ref|YP_004096106.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cellulosilyticus DSM 2522] gi|315474772|gb|ADU31375.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cellulosilyticus DSM 2522] Length = 197 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P PE+A SGRSNVGKSS IN ++ RK LARTS PG+TQ LN++ Sbjct: 9 IISAAKPHQFPAGPFPEVALSGRSNVGKSSFINTMLARKGLARTSQRPGKTQTLNWYFIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + VD+PGYGYA+ K ++WG ++ Y ER L+ V LID RH Sbjct: 69 ER---------FHFVDVPGYGYAKVSKSEREAWGRVMETYFQEREQLKGVVQLIDIRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ +L IV TK DK+ + +++ K + + +++ SS Sbjct: 120 TEDDVMMYDWLKHHEHPVLIVATKADKIPRGKWDKHVKQIKEHLELH--TEDKIVVFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 +G E K + + Sbjct: 178 TGQGKEKAWKEMSNLL 193 >gi|153955957|ref|YP_001396722.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium kluyveri DSM 555] gi|189037173|sp|A5N2K5|ENGB_CLOK5 RecName: Full=Probable GTP-binding protein EngB gi|146348815|gb|EDK35351.1| EngB [Clostridium kluyveri DSM 555] Length = 197 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 11/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ PK EIAF GRSNVGKSSLIN L NRK L + S PG+T+ +NFF+ Sbjct: 8 FIISAVHPSQYPKDKRIEIAFVGRSNVGKSSLINALTNRKKLVKVSGTPGKTRLINFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA+ K SWG ++ YL R L+ V LL+DCRH Sbjct: 68 NN---------EFYFVDLPGYGYAKISKTEKKSWGKVVEDYLRGREELKRVILLLDCRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ +L + IV TK+DK+S + + L+ K ++ P E++ SS Sbjct: 119 PTNDDITMYKWLKYYNYNTIIVATKVDKVSKSQLFKNLKIIKDTLK--PETGDEILTFSS 176 Query: 194 VKRKGIEVLRKAILETINY 212 + ++G E K + I++ Sbjct: 177 LNKQGKEEFLKVLESVIDF 195 >gi|126653685|ref|ZP_01725604.1| GTP-binding protein [Bacillus sp. B14905] gi|126589722|gb|EAZ83857.1| GTP-binding protein [Bacillus sp. B14905] Length = 193 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ G PE A +GRSNVGKSS IN ++ RK LAR S+ PG+TQ LNF+ + Sbjct: 9 VISAVRPDQYPEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQTLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K ++WG +I RY + R L+ V +ID RH Sbjct: 69 E---------QLFFVDVPGYGYAKVSKSEREAWGKMIERYFTGRQELKAVVQIIDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ ++ FL + ++ TK DK+ + + K + + +I SS Sbjct: 120 TADDRMMYDFLKHYNIPCIVIATKADKIPKGKWDKHKKIVKETLEM--EKNDPLIVFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 G E + I + Sbjct: 178 TGLGFEEAWRTIENRM 193 >gi|282879591|ref|ZP_06288322.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella timonensis CRIS 5C-B1] gi|281306539|gb|EFA98568.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella timonensis CRIS 5C-B1] Length = 199 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 104/195 (53%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P +G P E AF GRSNVGKSSLIN+L N + LA+TS+ PG+T +N F+ Sbjct: 8 FVLSSPNLGKCPTDQRIEYAFIGRSNVGKSSLINMLCNHQGLAKTSSTPGKTLLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ KK + LI YL R L V++LID RH Sbjct: 68 NN---------DWYLVDLPGYGYAKRSKKVQEEIQKLITTYLLHREQLVNVFVLIDVRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + + I+ TK DKL A+ ++K +++ P TSS Sbjct: 119 QQKIDREFIDWLGLNEIPFTIIFTKADKLGTVKAKMNVDKWMSQLKDVWEELPRYFITSS 178 Query: 194 VKRKGIEVLRKAILE 208 K+ G + L I E Sbjct: 179 EKKTGRQELLDYIDE 193 >gi|229496828|ref|ZP_04390537.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas endodontalis ATCC 35406] gi|229316239|gb|EEN82163.1| ribosome biogenesis GTP-binding protein YsxC [Porphyromonas endodontalis ATCC 35406] Length = 198 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 10/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ ++ P++ PE AF GRSNVGKSSLIN+L LA TS+ PG+TQ +N F+ Sbjct: 8 FVKSSAQLDQCPESKLPEYAFIGRSNVGKSSLINMLTGHTKLAMTSSKPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA K+ ++ +I Y+ R L +++L+D R Sbjct: 68 N---------KDWHLVDLPGYGYAARNKEQRLAFRRMIEGYILGRKQLINLFILVDSRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + + + V IV+TKIDKLS QE++++ + + P TSS Sbjct: 119 PQKIDLEFIQQMGEAGVPLSIVMTKIDKLSRPKLQESIKRYQETLSEEWDELPPFFYTSS 178 Query: 194 VKRKGIEVLRKAILETINY 212 K G E L + I ETIN+ Sbjct: 179 EKATGREELLQYI-ETINH 196 >gi|282858564|ref|ZP_06267735.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bivia JCVIHMP010] gi|282588689|gb|EFB93823.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bivia JCVIHMP010] Length = 201 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + P+ PE AF GRSNVGKSSLIN+L N K LA+TS+ PG+T +N F+ Sbjct: 8 FTISAPTVSKCPEDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ K +I +Y+ +R L V++LID RH Sbjct: 68 N---------KEWYLVDLPGYGYAKNSKSVRAKLEQMIAQYILQRKQLMNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ID++ +L K V + I+ TK DKL+ A+ + + P TS+ Sbjct: 119 QQTIDREFIDWLGKSNVPFSIIFTKADKLTAGRAKSNALLWMKKLEDTWEELPPYFITSA 178 Query: 194 VKRKGIEVLRKAILETIN 211 K+ G E + I E+IN Sbjct: 179 EKKTGKEEVLDYI-ESIN 195 >gi|302386736|ref|YP_003822558.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium saccharolyticum WM1] gi|302197364|gb|ADL04935.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium saccharolyticum WM1] Length = 199 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PE AF+G+SNVGKSSLIN L+NRK+ ARTS+ PG+TQ +NF+ D Sbjct: 16 SKLPENTKPEFAFAGKSNVGKSSLINALMNRKSFARTSSQPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 A+ VD+PGYGYA+ ++ WG +I YL + LRCV+LLID RH + D+ + Sbjct: 70 ---ALYYVDLPGYGYAKVSQEVKAKWGKMIENYLHKSPMLRCVFLLIDIRHEPSENDKTM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DK+ + Q++++ + + + VIP S+ ++G E Sbjct: 127 YDWIVYNGYQPVIIATKLDKIKRSQVQKSVKILRQGLG--LGSDVMVIPFSAETKQGREE 184 Query: 202 LRKAILETIN 211 + + I ET+N Sbjct: 185 IWEMISETVN 194 >gi|225019948|ref|ZP_03709140.1| hypothetical protein CLOSTMETH_03902 [Clostridium methylpentosum DSM 5476] gi|224947312|gb|EEG28521.1| hypothetical protein CLOSTMETH_03902 [Clostridium methylpentosum DSM 5476] Length = 200 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 74/202 (36%), Positives = 103/202 (50%), Gaps = 13/202 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ F+ + +P + EIAF+GRSNVGKSS+IN L NRK LAR S+ PG+T Sbjct: 4 FNKAE--FVTSYGLLSQIPPSERLEIAFAGRSNVGKSSMINKLFNRKGLARVSSVPGKTA 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ D + VD+PGYGYA+ K W LI Y + + V Sbjct: 62 TINFYQTGD---------EVYFVDLPGYGYAKVAKSEKQRWSELIEGYFHDDRDIALVVQ 112 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID RH ++D + FL + + + IVLTK DKLS LE + + Sbjct: 113 LIDMRHPPTKLDLQMIDFLIESEIPFLIVLTKADKLSKNQQAVRLEALQTELP--YADQI 170 Query: 187 EVIPTSSVKRKGIEVLRKAILE 208 ++P SS G+E LR+ + E Sbjct: 171 TMLPFSSETGMGVEELREILNE 192 >gi|119369201|sp|Q0I1G1|ENGB_HAES1 RecName: Full=Probable GTP-binding protein EngB Length = 204 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +++ FL P I +LP+ EIAF+GRSN GKS+ +N L +KNLARTS Sbjct: 1 MTNIKLNYHKTHFLMSAPNIKVLPEDSGIEIAFAGRSNAGKSTALNALTQQKNLARTSKI 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFQV---------EPNCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 112 GGLVILMDIRHPLKDLDQQMIEWAVSADLPVLLLLTKADKLSQSARSKQVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V S+ + GIE L + + + Sbjct: 172 Q-GDVQVEAFSAQNKIGIERLSEKLDQW 198 >gi|304407486|ref|ZP_07389138.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus curdlanolyticus YK9] gi|304343437|gb|EFM09279.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus curdlanolyticus YK9] Length = 195 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 106/197 (53%), Gaps = 11/197 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ P+ PEIA +GRSNVGKSSLIN ++ RKNLARTS+ PG+TQ LN+ Sbjct: 5 SAEFIISAVRPDQYPEDALPEIALAGRSNVGKSSLINRMILRKNLARTSSQPGKTQQLNY 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + + + VD PGYGYA+ K ++WG +I +L R L+ V L++D Sbjct: 65 YKINE---------QIYFVDFPGYGYAKVSKTEREAWGRMIETFLKVREELKLVLLIVDI 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D ++ +L + IV+TK DK+ + + ++ K ++ PT +VI Sbjct: 116 RHAPSKDDCLMYDWLKHYEIPICIVVTKADKIPKSKWDKQIKLVKETLQADPT--DKVIM 173 Query: 191 TSSVKRKGIEVLRKAIL 207 SS G E L IL Sbjct: 174 FSSELGLGREQLWDYIL 190 >gi|295094046|emb|CBK83137.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Coprococcus sp. ART55/1] Length = 198 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 105/189 (55%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PEIAF+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +NF+ Sbjct: 16 SKLPDNDLPEIAFAGKSNVGKSSLINGLLNRKSLARTSAQPGKTQTINFYNVN------- 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA+ + WG +I RYL L+ V+LLID RH + D + Sbjct: 69 --KNLYFVDLPGYGYAKVSVEIRAKWGKMIERYLHGSPQLKKVFLLIDIRHVPSENDCMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DK+ + Q+ L+ + + P +IP S+ ++G + Sbjct: 127 YDWIVDNGYEPVIICTKLDKIKRSQVQKNLKLIREKLDLVPGT--TMIPFSAQTKQGRDE 184 Query: 202 LRKAILETI 210 + I ET+ Sbjct: 185 IWNLIEETL 193 >gi|91216020|ref|ZP_01252989.1| GTP-binding protein [Psychroflexus torquis ATCC 700755] gi|91185997|gb|EAS72371.1| GTP-binding protein [Psychroflexus torquis ATCC 700755] Length = 199 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 99/195 (50%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P + PE AF GRSNVGKSSLIN+L R +LA+ S PG+T+ +N F+ Sbjct: 8 FVMSNSDVTKCPNSQLPEYAFIGRSNVGKSSLINMLTERNSLAKVSGKPGKTRLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA+ KK ++ I Y +R L ++LID RH Sbjct: 68 ND---------SWHLVDLPGYGYAKVSKKEKKTFQKYITAYFEKRQQLVNTFVLIDSRHA 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + +D + +L K A+ IV TK DKL P + + K + P TSS Sbjct: 119 PQPLDLEFLEWLGKNAIPLSIVFTKTDKLKPKVLENNIIDYKTKLMETWEELPPYFTTSS 178 Query: 194 VKRKGIEVLRKAILE 208 + G + + I E Sbjct: 179 AHKTGRDDILNYIHE 193 >gi|296444655|ref|ZP_06886619.1| ribosome biogenesis GTP-binding protein YsxC [Methylosinus trichosporium OB3b] gi|296257923|gb|EFH04986.1| ribosome biogenesis GTP-binding protein YsxC [Methylosinus trichosporium OB3b] Length = 219 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 92/197 (46%), Positives = 117/197 (59%), Gaps = 4/197 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + LP GPPEIAF+GRSNVGKSSL+N L RK LAR SN PGRTQ LNFF Sbjct: 22 FIFASAKSSDLPPIGPPEIAFAGRSNVGKSSLLNALTGRKTLARVSNTPGRTQQLNFFAV 81 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVDMPGYGYA K+ V SW L+ +L R++L V++LID R G Sbjct: 82 GAEPGAE----PLRLVDMPGYGYAAVGKEKVASWTRLMEDFLRGRASLARVFVLIDSRRG 137 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D+++ LDK AVSYQIVLTK D+L L + + P A P+V TSS Sbjct: 138 IKEMDEEMLDLLDKSAVSYQIVLTKRDELKLAERAAALAAAEAALAKRPAAFPQVAATSS 197 Query: 194 VKRKGIEVLRKAILETI 210 +GI LR I + Sbjct: 198 RDGEGIAELRAGIARLL 214 >gi|295109359|emb|CBL23312.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus obeum A2-162] Length = 201 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 11/186 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P G PE+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ D + Sbjct: 16 SKIPDTGLPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFYKINDELD--- 72 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYAR + WG +I YL L+ V+LLID RH D+ + Sbjct: 73 ------LVDLPGYGYARVTPAEKEKWGKMIENYLHTSHNLKAVFLLIDIRHDPSANDRQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DKL + Q+ L+ + ++ VIP S+ ++G + Sbjct: 127 YEWILHNGYEPIIIATKLDKLKRSQVQKNLKAIREGLQLRKGT--TVIPYSAETKQGRDE 184 Query: 202 LRKAIL 207 + + I Sbjct: 185 IWELIE 190 >gi|326693799|ref|ZP_08230804.1| GTP-binding protein YsxC [Leuconostoc argentinum KCTC 3773] Length = 196 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 99/196 (50%), Gaps = 10/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P G PEIA GRSNVGKSSL N L+ RKN ARTS+ PG+TQ LNF+ + Sbjct: 9 VMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTLNFYNVE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ KK +++G +I Y++ R LR V L+D RH Sbjct: 69 D---------QLYFVDVPGYGYAKVSKKQREAFGQMIEEYITSRKQLRGVISLVDARHDP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ +L + +V TK DK+S + + K + + + + SS Sbjct: 120 SADDIAMYEWLHYYNIPILVVATKADKISKSKFNKYEANIKRTLG-FDDEDSDFLFFSSE 178 Query: 195 KRKGIEVLRKAILETI 210 + G + + I I Sbjct: 179 TKYGKDQVWSWIESHI 194 >gi|288553615|ref|YP_003425550.1| GTP-binding protein YsxC [Bacillus pseudofirmus OF4] gi|288544775|gb|ADC48658.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus pseudofirmus OF4] Length = 195 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 11/189 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PEIA +GRSNVGKSS IN ++NRK+LARTS PG+TQ LNF+ + Sbjct: 12 AVKPEQYPNTPLPEIALAGRSNVGKSSFINKMINRKSLARTSQRPGKTQTLNFYAINE-- 69 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + VD+PGYG+A+ KK ++WG +I Y+ +R LR V LID RH + Sbjct: 70 -------QLHFVDVPGYGFAKVSKKEREAWGKMIETYIQQREQLRAVVQLIDVRHKPTED 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ ++ +L + ++ TK DK+ Q+ L + + ++ SS Sbjct: 123 DKLMYEWLKHFDIPVIVIATKCDKIPKGKWQKHLRVISEELSKHEE--DPLLLFSSESGH 180 Query: 198 GIEVLRKAI 206 G E K I Sbjct: 181 GKEQAWKTI 189 >gi|170718325|ref|YP_001783554.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus somnus 2336] gi|168826454|gb|ACA31825.1| GTP-binding protein HSR1-related [Haemophilus somnus 2336] Length = 231 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +++ FL P I +LP+ EIAF+GRSN GKS+ +N L +KNLARTS Sbjct: 28 MTNIKLNYHKTHFLMSAPNIQVLPEDSGIEIAFAGRSNAGKSTALNALTQQKNLARTSKT 87 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 88 PGRTQLINLFQV---------EPNCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQKRECL 138 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 139 GGLVILMDIRHPLKDLDQQMIEWAVSADLPVLLLLTKADKLSQSARSKQVKMVRESILPF 198 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V S+ + GIE L + + + Sbjct: 199 Q-GDVQVEAFSAQNKIGIERLSEKLDQW 225 >gi|194290991|ref|YP_002006898.1| ribosome biogenesis gtp-binding protein ysxc [Cupriavidus taiwanensis LMG 19424] gi|238692783|sp|B3R7D7|ENGB_CUPTR RecName: Full=Probable GTP-binding protein EngB gi|193224826|emb|CAQ70837.1| GTPase binding protein, involved in coordination of cell cycle [Cupriavidus taiwanensis LMG 19424] Length = 237 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F Sbjct: 9 FFITVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSRTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +K P LVD+PGYGYA W GL+ Y+ R L + L++D R Sbjct: 69 ---APVKAPDPLAFLVDLPGYGYAEVSGSAKYHWQGLLSDYVQTRQQLAGLILMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP--- 190 +D + + ++LTK DKL+ + + L +T+ +++ Y +P Sbjct: 126 FTDLDCQMVEWFLPTGRPIHVLLTKADKLTNSENAKALRETRKMLQGYAEQLETPVPMTA 185 Query: 191 --TSSVKRKGIEVLRKAILETIN 211 SS+KR+GIE + I +N Sbjct: 186 QLFSSLKRRGIEEAQAVIAGWLN 208 >gi|194468441|ref|ZP_03074427.1| small GTP-binding protein [Lactobacillus reuteri 100-23] gi|194453294|gb|EDX42192.1| small GTP-binding protein [Lactobacillus reuteri 100-23] Length = 196 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 PK PEIA GRSNVGKSSL N+L+NR+N A TS+ PG+TQ LNF+ +D Sbjct: 10 ISAVSDEQYPKTNIPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYDVED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ KK + +G +I +YL++R LR V L+D RH Sbjct: 70 ---------KVYFVDVPGYGYAKVSKKERERFGKMIEQYLTQREQLRGVIQLVDARHEPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D +++++L + IV TKIDK+ + L K + + +I S+ + Sbjct: 121 PDDVNMYNWLQYYNIPTLIVGTKIDKVKRSAWNRQLSLIKKALD--VESSTPIILFSATE 178 Query: 196 RKGIEVLRKAILETIN 211 +KG + + + I E + Sbjct: 179 KKGKDDVWQWIEERMG 194 >gi|119369229|sp|Q6LLQ5|ENGB_PHOPR RecName: Full=Probable GTP-binding protein EngB Length = 233 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + ++K LARTS PGRTQ +N F Sbjct: 17 FITSAPDIRHLPQDTGVEIAFAGRSNAGKSSALNRITDQKGLARTSKTPGRTQLINMFEV 76 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 77 TQGCN---------LIDLPGYGFAQVPLELKIKWQKALGEYLQKRECLKGLVVLMDIRHP 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DK+ + L K + +++ ++ SS Sbjct: 128 MKDLDQQMIFWAIESRLPVLVLLTKADKMKSGARKAQLLKVRESSKSF-GGDVQIELFSS 186 Query: 194 VKRKGIEVLRKAILETIN 211 +K G++ +R+ + Sbjct: 187 LKGIGLDQVRRKLDTWFG 204 >gi|240146202|ref|ZP_04744803.1| ribosome biogenesis GTP-binding protein YsxC [Roseburia intestinalis L1-82] gi|257201678|gb|EEU99962.1| ribosome biogenesis GTP-binding protein YsxC [Roseburia intestinalis L1-82] Length = 208 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 108/189 (57%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P E+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ D Sbjct: 16 SKVPDTAYAEVAFAGKSNVGKSSLINALMNRKVLARTSAQPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 AM LVD+PGYGYA+A ++ WG +I YL L+ V+LLID RH D+ + Sbjct: 70 ---AMYLVDLPGYGYAKASEEVKAKWGKMIENYLHTSKQLKAVFLLIDIRHDPSANDRMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + I+ TK+DK+ + Q+ ++ + + P +IP S+ ++G + Sbjct: 127 YEWMVYQGFAPIIIATKLDKIKRSQIQKNVKAIREGLNVQPGTM--IIPFSAETKQGRDE 184 Query: 202 LRKAILETI 210 + + I + Sbjct: 185 IWELIDSFV 193 >gi|52081302|ref|YP_080093.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus licheniformis ATCC 14580] gi|52786681|ref|YP_092510.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus licheniformis ATCC 14580] gi|319647215|ref|ZP_08001437.1| GTPase EngB [Bacillus sp. BT1B_CT2] gi|81825232|sp|Q65GJ7|ENGB_BACLD RecName: Full=Probable GTP-binding protein EngB gi|52004513|gb|AAU24455.1| GTP-binding domain,Small GTP-binding protein domain [Bacillus licheniformis ATCC 14580] gi|52349183|gb|AAU41817.1| YsxC [Bacillus licheniformis ATCC 14580] gi|317390562|gb|EFV71367.1| GTPase EngB [Bacillus sp. BT1B_CT2] Length = 195 Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ G PEIA +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVKPEQYPEGGLPEIALAGRSNVGKSSFINTMINRKNLARTSSKPGKTQTLNFYIIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYG+A+ K ++WG +I YL+ R L+ V ++D RH Sbjct: 69 D---------VLHFVDVPGYGFAKVSKTEREAWGRMIETYLTSREELKAVVQIVDLRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + ++ TK DK+ ++ + K + +I SS Sbjct: 120 SQDDVMMYDFLKHYEIPVIVIATKADKIPKGKWEKHAKVVKETLNI--EKEDRLILFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 +KG + AI + I Sbjct: 178 TKKGKQEAWSAIEQMI 193 >gi|89098931|ref|ZP_01171811.1| GTP-binding protein [Bacillus sp. NRRL B-14911] gi|89086335|gb|EAR65456.1| GTP-binding protein [Bacillus sp. NRRL B-14911] Length = 195 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ PE A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVKPAQYPEESLPEFALAGRSNVGKSSFINKMLNRKNLARTSSKPGKTQTLNFYLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + M VD+PGYGYA+ KK ++WG +I Y + R L+ L++D RH Sbjct: 69 EM---------MHFVDVPGYGYAKVSKKEREAWGRMIETYFTSREQLKAAVLIVDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL + I+ TK DK+ T Q+ + TK + P +++ SS Sbjct: 120 TKDDIMMYDFLKHHGIRCIIIATKADKIPKTKRQKHFKITKETLELEPG--DDIVLFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 +G + + + + Sbjct: 178 TGEGKDEAWGILKKYM 193 >gi|254427895|ref|ZP_05041602.1| GTPase, putative [Alcanivorax sp. DG881] gi|196194064|gb|EDX89023.1| GTPase, putative [Alcanivorax sp. DG881] Length = 203 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 17/210 (8%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M+ + FL+ + P E+AF+GRSN GKSS IN L +++ LARTS Sbjct: 9 MLHQAL-------FLQSAQRLDQCPPDEGLEVAFAGRSNAGKSSAINRLTSQRTLARTSK 61 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ LNFF + LVD+PGYGYA+ K + W + YLSER Sbjct: 62 TPGRTQLLNFFQLDEER---------RLVDLPGYGYAKVAKSTRNEWQQHLDHYLSERQA 112 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L + L++D RH +K D + + + + I++TK DKL A+ TL + K +++ Sbjct: 113 LVGLVLMMDIRHPLKDFDLLMLEWSAQANMPIHILMTKADKLKFGAAKSTLLQVKKQLKD 172 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +P + S+ G + + E + Sbjct: 173 HPAPL-SLQLFSATNGTGCDEAWDKLGEWL 201 >gi|255319822|ref|ZP_05361027.1| GTPase EngB [Acinetobacter radioresistens SK82] gi|262380354|ref|ZP_06073508.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter radioresistens SH164] gi|255303141|gb|EET82353.1| GTPase EngB [Acinetobacter radioresistens SK82] gi|262297800|gb|EEY85715.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter radioresistens SH164] Length = 278 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 9/202 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NF Sbjct: 44 KAEFLMSAPKLSLCVEDTGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINF 103 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + P LVD+PGYGYA P+ W + YL R +L+ + LL+D Sbjct: 104 FSLGN--------PDQRLVDLPGYGYAAVPETMKIVWQKELENYLIHRESLQGLVLLMDI 155 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH ++ D + + + + I+LTK DKL+ A +TL + K ++ + Sbjct: 156 RHPLQHFDTMMLEWAHSRKLFVHILLTKADKLNRGPANKTLLEVKQELKKMKLNF-SIQL 214 Query: 191 TSSVKRKGIEVLRKAILETINY 212 SS+ ++G+E L + +N+ Sbjct: 215 FSSLNKQGLEELASVMAGRLNF 236 >gi|116492901|ref|YP_804636.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus pentosaceus ATCC 25745] gi|122265635|sp|Q03F28|ENGB_PEDPA RecName: Full=Probable GTP-binding protein EngB gi|116103051|gb|ABJ68194.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745] Length = 195 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+ G PEIA GRSNVGKSSL N L+NRK+ ARTS+ PG+TQ LNF+ +D Sbjct: 10 ISAVRPDQYPEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQTLNFYRVED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ +K + WG +I +Y++ R L+ V L+D RH Sbjct: 70 ---------QLFFVDVPGYGYAKVSQKEREKWGKMIEKYITSRKELKGVISLVDARHEPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D ++ +L + +V TK DK++ + K K + S+ Sbjct: 121 DDDITMYQYLRYYDIPVLVVATKSDKIARGKWNQHESKIKKALD--FDGSSAFQMFSAQT 178 Query: 196 RKGIEVLRKAILETIN 211 + G E + K I + + Sbjct: 179 KMGKEEVWKWIEDRMG 194 >gi|90414662|ref|ZP_01222633.1| GTP-binding protein [Photobacterium profundum 3TCK] gi|90324204|gb|EAS40779.1| GTP-binding protein [Photobacterium profundum 3TCK] Length = 228 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + ++K LARTS PGRTQ +N F Sbjct: 12 FITSAPDIRHLPQDTGVEIAFAGRSNAGKSSALNRITDQKGLARTSKTPGRTQLINMFEV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 72 TQGCN---------LIDLPGYGFAQVPLELKIKWQKALGEYLQKRECLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DK+ + L K + +++ ++ SS Sbjct: 123 MKDLDQQMIFWAIESRLPVLVLLTKADKMKSGARKAQLLKVRESSKSF-GGDVQIELFSS 181 Query: 194 VKRKGIEVLRKAILETIN 211 +K G++ +R+ + Sbjct: 182 LKGIGLDQVRRKLDTWFG 199 >gi|270294150|ref|ZP_06200352.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D20] gi|270275617|gb|EFA21477.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D20] Length = 202 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 100/198 (50%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ Sbjct: 8 FVISNTDVRKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ +K + +I Y+ +R + C+++LID R Sbjct: 68 N---------KSWYIVDLPGYGYAKRGQKGQEQIKRIIESYILQREQMTCLFVLIDSRLA 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ID + +L + V + IV TK DKL + + ++ P TSS Sbjct: 119 PQAIDLEFTEWLGENGVPFAIVFTKADKLKGGRLNTHINEYLEQLKEQWEELPPYFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 R G + L I E+IN Sbjct: 179 ENRMGRKELLDYI-ESIN 195 >gi|261250088|ref|ZP_05942665.1| GTP-binding protein EngB [Vibrio orientalis CIP 102891] gi|260939592|gb|EEX95577.1| GTP-binding protein EngB [Vibrio orientalis CIP 102891] Length = 221 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 12 FITSAPDIRALPADEGIEVAFAGRSNAGKSSSLNRLTNQRSLAKTSKTPGRTQLINLFKV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYG+A+ P + W + YL +R+ L+ + +L+D RH Sbjct: 72 TD---------GCHIVDLPGYGFAQVPLEMKKKWQKSLGEYLQKRTCLKGLVVLMDIRHP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + Q++LTK DKL + + K K + V SS Sbjct: 123 MKDLDQQLIFWAVDSGIPVQVLLTKADKLKSGARKAQVLKIKKDAVGF-GGDVSVAAFSS 181 Query: 194 VKRKGIEVLRKAILET 209 +K G++VLR + E Sbjct: 182 LKGLGVDVLRNKLDEW 197 >gi|169829417|ref|YP_001699575.1| GTP-binding protein [Lysinibacillus sphaericus C3-41] gi|168993905|gb|ACA41445.1| Probable GTP-binding protein [Lysinibacillus sphaericus C3-41] Length = 186 Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ G PE A +GRSNVGKSS IN ++ RK LAR S+ PG+TQ LNF+ + Sbjct: 2 VISAVRPDQYPEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQTLNFYKIE 61 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K ++WG +I RY + R L+ V ++D RH Sbjct: 62 E---------QLFFVDVPGYGYAKVSKSEREAWGKMIERYFTGRQELKAVVQIVDLRHPP 112 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ ++ FL + ++ TK DK+ + + K + + +I SS Sbjct: 113 TADDRMMYDFLKHYNIPCIVIATKADKIPKGKWDKHKKIVKETLEM--EKNDPLIVFSSE 170 Query: 195 KRKGIEVLRKAILETI 210 G E + I + Sbjct: 171 SGLGFEEAWRTIENRM 186 >gi|326802551|ref|YP_004320370.1| GTP-binding protein engB [Sphingobacterium sp. 21] gi|326553315|gb|ADZ81700.1| GTP-binding protein engB [Sphingobacterium sp. 21] Length = 206 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 105/208 (50%), Gaps = 9/208 (4%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M+S I + F+ I LP PE AF GRSNVGKSSLIN L K LA+TS Sbjct: 1 MLSLPIMIIKSAEFVCSNTRIDKLPPPTIPEYAFIGRSNVGKSSLINALTQHKGLAKTSQ 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ +N F+ LVD+PGYGYA+ K N W I +YL R Sbjct: 61 TPGKTQLINHFLVN---------KEWFLVDLPGYGYAKTSKTNRSEWEKFIKKYLFNREN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+CV++LID R ++ D D L +K + + ++ TK DK S ++ +E + + Sbjct: 112 LQCVFVLIDSRLTPQKNDLDFCCLLGEKGIPFILIFTKADKQSKIKSEHNIELFRKALLT 171 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + P I TSS R G + + I E Sbjct: 172 WFEEVPPHILTSSETRNGCDEVLGLIDE 199 >gi|261344430|ref|ZP_05972074.1| ribosome biogenesis GTP-binding protein YsxC [Providencia rustigianii DSM 4541] gi|282567333|gb|EFB72868.1| ribosome biogenesis GTP-binding protein YsxC [Providencia rustigianii DSM 4541] Length = 204 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LPK E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FVISAPDIRHLPKDTGIEVAFAGRSNAGKSSALNALTQQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL +R ++ + +L+D RH Sbjct: 73 EE---------GIRLVDLPGYGYAEVPEEMKRKWQQALGEYLQKRECIKGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + ++ ++LTK DKL+ ++ L + + EV S+ Sbjct: 124 LKDLDMQMVEWSVAMSIPVLVLLTKADKLASGARKKQLMDVRQALAPL-NGDIEVEYFSA 182 Query: 194 VKRKGIEVLRKAILET 209 K+ GI+ LR + Sbjct: 183 PKKIGIDKLRIKLDNW 198 >gi|78484393|ref|YP_390318.1| GTP-binding protein, HSR1-related [Thiomicrospira crunogena XCL-2] gi|119369276|sp|Q31JM9|ENGB_THICR RecName: Full=Probable GTP-binding protein EngB gi|78362679|gb|ABB40644.1| cell division checkpoint GTPase YihA [Thiomicrospira crunogena XCL-2] Length = 212 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 117/212 (55%), Gaps = 14/212 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + H ++ ++ +L+ P++ P+ E+AF+GRSN GKSS +N++ +++ LA+TS Sbjct: 1 MQHPLYQQA--TYLKSAPDLSHCPEDFGYEVAFAGRSNAGKSSALNVITSQRGLAKTSKT 58 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +NFF + LVD+PGYGYA+ +W + +Y+ RS+L Sbjct: 59 PGRTQLINFFECDEQRK---------LVDLPGYGYAKVNVNTKRAWERSLSQYIEVRSSL 109 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RN 180 + + +++D R +ID + + + I+LTK DKL AQ +L K + L+ Sbjct: 110 KGLIMMVDSRMPPTEIDLMMLDWTLTLNLPVHILLTKSDKLKKGPAQNSLLKMRQLLNEK 169 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 YP H V SS+KR+G++ + + E + Y Sbjct: 170 YP--HATVQLFSSLKRQGLDEVWAKLDEWMEY 199 >gi|148543886|ref|YP_001271256.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri DSM 20016] gi|184153286|ref|YP_001841627.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri JCM 1112] gi|227364794|ref|ZP_03848842.1| GTPase [Lactobacillus reuteri MM2-3] gi|227544994|ref|ZP_03975043.1| GTPase [Lactobacillus reuteri CF48-3A] gi|300909971|ref|ZP_07127431.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri SD2112] gi|325682581|ref|ZP_08162098.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri MM4-1A] gi|166920113|sp|A5VJ95|ENGB_LACRD RecName: Full=Probable GTP-binding protein EngB gi|229807536|sp|B2G6R5|ENGB_LACRJ RecName: Full=Probable GTP-binding protein EngB gi|148530920|gb|ABQ82919.1| small GTP-binding protein [Lactobacillus reuteri DSM 20016] gi|183224630|dbj|BAG25147.1| GTP-binding protein [Lactobacillus reuteri JCM 1112] gi|227070138|gb|EEI08513.1| GTPase [Lactobacillus reuteri MM2-3] gi|227185011|gb|EEI65082.1| GTPase [Lactobacillus reuteri CF48-3A] gi|300892619|gb|EFK85979.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri SD2112] gi|324978420|gb|EGC15370.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus reuteri MM4-1A] Length = 196 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 PK PEIA GRSNVGKSSL N+L+NR+N A TS+ PG+TQ LNF+ +D Sbjct: 10 ISAVSDEQYPKTNIPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYDVED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ KK + +G +I +YL++R LR V L+D RH Sbjct: 70 ---------KVYFVDVPGYGYAKVSKKERERFGKMIEQYLTQREQLRGVIQLVDARHEPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D +++++L + IV TKIDK+ + L K + + +I S+ + Sbjct: 121 PDDVNMYNWLQYYNIPTLIVGTKIDKVKRSAWNRQLSLIKKTLD--VESSTPIILFSATE 178 Query: 196 RKGIEVLRKAILETIN 211 +KG + + + I E + Sbjct: 179 KKGKDDVWQWIEERMG 194 >gi|182681243|ref|YP_001829403.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa M23] gi|182631353|gb|ACB92129.1| GTP-binding protein HSR1-related [Xylella fastidiosa M23] Length = 219 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 9/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 26 YLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTV 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P LVD+PGYGYA+ PK+ W I Y R +LR + +++D RH Sbjct: 86 T---------PQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHP 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D + ++ ++ + Q +LTK DKL +TL+K + + + H + SS Sbjct: 137 LKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSS 196 Query: 194 VKRKGIEVLRKAILETIN 211 R+G+E L I + Sbjct: 197 KSRQGVEQLHTVIETWLG 214 >gi|28198564|ref|NP_778878.1| GTPase EngB [Xylella fastidiosa Temecula1] gi|32129522|sp|Q87DM6|ENGB_XYLFT RecName: Full=Probable GTP-binding protein EngB gi|28056648|gb|AAO28527.1| GTP-binding protein [Xylella fastidiosa Temecula1] gi|307579692|gb|ADN63661.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa subsp. fastidiosa GB514] Length = 203 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 9/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 10 YLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P LVD+PGYGYA+ PK+ W I Y R +LR + +++D RH Sbjct: 70 T---------PQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D + ++ ++ + Q +LTK DKL +TL+K + + + H + SS Sbjct: 121 LKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 R+G+E L I + Sbjct: 181 KSRQGVEQLHTVIETWLG 198 >gi|307823064|ref|ZP_07653294.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacter tundripaludum SV96] gi|307735839|gb|EFO06686.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacter tundripaludum SV96] Length = 210 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 16/210 (7%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 + ++ ++ F+ P + P E+AF+GRSN GKSS IN L + LAR S PG Sbjct: 2 NPVYHQAK--FINSSPHLSNTPPDQGLEVAFAGRSNAGKSSAINTLTRQNGLARISKTPG 59 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ LNFF + VD+PGYGYA+ P + W L+ YL+ R +L Sbjct: 60 RTQMLNFFEINERQ---------RFVDLPGYGYAKVPLEVKKKWHELMETYLTSRKSLCA 110 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR--NY 181 + L++D RH + + D + + + + I+LTK DKL+ A+ TL + + ++ N+ Sbjct: 111 IILVMDVRHPLTEFDWQMVEWCEHTRLPLHILLTKADKLNYGAAKNTLLQVQKELKDSNF 170 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 P + SS+K+ GI+ + A+ + + Sbjct: 171 PLT---IQLFSSLKKTGIDEVHAALDQLFH 197 >gi|300173594|ref|YP_003772760.1| GTP-binding protein engB [Leuconostoc gasicomitatum LMG 18811] gi|299887973|emb|CBL91941.1| GTP-binding protein engB [Leuconostoc gasicomitatum LMG 18811] Length = 194 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 98/196 (50%), Gaps = 10/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P G PEIA GRSNVGKSSL N L+ RKN ARTS+ PG+TQ LNF+ + Sbjct: 9 VMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTLNFYNVE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ KK + +G +I Y++ R LR V L+D RH Sbjct: 69 D---------KLYFVDVPGYGYAKVSKKQREEFGHMIEEYITSRKQLRGVVSLVDARHEP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ +L + IV TK DK+S + + K + + + SS Sbjct: 120 SDDDVSMYEWLHYYNIPILIVATKSDKISKSKFNKYASNIKQTLG-FDEDESDFQFFSSE 178 Query: 195 KRKGIEVLRKAILETI 210 + G + + K I I Sbjct: 179 TKYGKDQVWKWIEAHI 194 >gi|209693840|ref|YP_002261768.1| ribosome biogenesis GTP-binding protein YsxC [Aliivibrio salmonicida LFI1238] gi|208007791|emb|CAQ77913.1| probable gtp-binding protein EngB [Aliivibrio salmonicida LFI1238] Length = 224 Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L N+++LA+TS PGRTQ +N F Sbjct: 21 FITSAPDIRHLPEDEGIEVAFAGRSNAGKSSALNRLTNQRSLAKTSKTPGRTQLINLFKV 80 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 81 DENC---------HIVDLPGYGFAQVPIELKKKWQKSLGEYLQKRECLKGLVVLMDIRHP 131 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + +A+ Q++LTK DKL Q + K + + V SS Sbjct: 132 MKDLDQQLIYWAVDQAIPVQVLLTKADKLKSGARQTQVLKIREASLEF-GGEVAVDAFSS 190 Query: 194 VKRKGIEVLRKAI 206 +K G+++LR + Sbjct: 191 LKGIGVDLLRAKL 203 >gi|227113277|ref|ZP_03826933.1| GTPase EngB [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327117|ref|ZP_03831141.1| GTPase EngB [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 203 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I L E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 4 FIISAPDIRHLATDSGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFQV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA P++ W + YL +R++L+ + +L+D RH Sbjct: 64 VD---------GVRLVDLPGYGYAEVPEQMKIKWQRALGEYLQKRNSLKGLVVLMDIRHP 114 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + ++LTK DKL+ + L + + + +V SS Sbjct: 115 LKDLDQQMIQWAVDVQLPVLVLLTKADKLASGARKTQLNMVREAVLPF-MGDIQVEAFSS 173 Query: 194 VKRKGIEVLRKAILET 209 +K+ G++ LR+ + Sbjct: 174 LKKLGVDKLRQKLDNW 189 >gi|325954327|ref|YP_004237987.1| GTP-binding protein engB [Weeksella virosa DSM 16922] gi|323436945|gb|ADX67409.1| GTP-binding protein engB [Weeksella virosa DSM 16922] Length = 205 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 100/197 (50%), Gaps = 9/197 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F++ PK PE AF GRSNVGKSSLIN+L N+++LA+TS PG+TQ LN Sbjct: 4 QSAEFIKSAQTYKDCPKPDLPEYAFIGRSNVGKSSLINMLTNKRDLAKTSGTPGKTQLLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ L D+PGYGYA+ K N + +I YL R+ L C ++L+D Sbjct: 64 TFLIN---------SNWYLTDLPGYGYAKVSKTNRAGFERMIYDYLEFRTNLVCTFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ D +L K + + I+ TK+DKLS Q+ L K + P + Sbjct: 115 SRHEPQKNDLKFMEWLGHKQIPFAIIFTKLDKLSSAKFQKNLNTYKRELLKTWEDLPMIF 174 Query: 190 PTSSVKRKGIEVLRKAI 206 TSS G L I Sbjct: 175 ATSSSSFIGRNELLDYI 191 >gi|261879389|ref|ZP_06005816.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bergensis DSM 17361] gi|270333957|gb|EFA44743.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella bergensis DSM 17361] Length = 205 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 9/194 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ P + P+ PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 7 QFVISAPTVEKCPRDTKPEFAFIGRSNVGKSSLINMLCNHKGLAKTSATPGKTLLINHFI 66 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 LVD+PGYGYA+ K ++ +I Y+ +R L +++LID RH Sbjct: 67 ID---------KEWYLVDLPGYGYAKRSKSVIEKIDKMIQTYILQRKQLINLFVLIDVRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++ID++ +L + + I+ TK DKL A++ + + + P TS Sbjct: 118 EQQKIDREFIDWLGISGIPFSIIFTKADKLGRVKAKQNADAWMNALLDSWEELPPYFITS 177 Query: 193 SVKRKGIEVLRKAI 206 S K+ G + + I Sbjct: 178 SEKKTGRDEVLDYI 191 >gi|113460478|ref|YP_718540.1| ribosome biogenesis GTP-binding protein YsxC [Haemophilus somnus 129PT] gi|112822521|gb|ABI24610.1| cell division checkpoint GTPase YihA [Haemophilus somnus 129PT] Length = 231 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +++ FL P I +LP+ EIAF+GRSN GKS+ +N L +KNLARTS Sbjct: 28 MTNIKLNYHKTHFLMSAPNIKVLPEDSGIEIAFAGRSNAGKSTALNALTQQKNLARTSKI 87 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 88 PGRTQLINLFQV---------EPNCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQKRECL 138 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + +L+D RH +K +DQ + + + ++LTK DKLS + + ++ + I + Sbjct: 139 GGLVILMDIRHPLKDLDQQMIEWAVSADLPVLLLLTKADKLSQSARSKQVKMVREAILPF 198 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V S+ + GIE L + + + Sbjct: 199 Q-GDVQVEAFSAQNKIGIERLSEKLDQW 225 >gi|291536691|emb|CBL09803.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Roseburia intestinalis M50/1] gi|291537975|emb|CBL11086.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Roseburia intestinalis XB6B4] Length = 199 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 108/189 (57%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P E+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ D Sbjct: 16 SKVPDTAYAEVAFAGKSNVGKSSLINALMNRKALARTSAQPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 AM LVD+PGYGYA+A ++ WG +I YL L+ V+LLID RH D+ + Sbjct: 70 ---AMYLVDLPGYGYAKASEEVKAKWGKMIENYLHTSKQLKAVFLLIDIRHDPSANDRMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + I+ TK+DK+ + Q+ ++ + + P +IP S+ ++G + Sbjct: 127 YEWMVYQGFAPIIIATKLDKIKRSQIQKNVKAIREGLNVQPGT--TIIPFSAETKQGRDE 184 Query: 202 LRKAILETI 210 + K I + Sbjct: 185 IWKLIDSFV 193 >gi|54310555|ref|YP_131575.1| ribosome biogenesis GTP-binding protein YsxC [Photobacterium profundum SS9] gi|46914998|emb|CAG21773.1| putative ATP/GTP-binding protein [Photobacterium profundum SS9] Length = 251 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 106/198 (53%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ EIAF+GRSN GKSS +N + ++K LARTS PGRTQ +N F Sbjct: 35 FITSAPDIRHLPQDTGVEIAFAGRSNAGKSSALNRITDQKGLARTSKTPGRTQLINMFEV 94 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N L+D+PGYG+A+ P + W + YL +R L+ + +L+D RH Sbjct: 95 TQGCN---------LIDLPGYGFAQVPLELKIKWQKALGEYLQKRECLKGLVVLMDIRHP 145 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + + + ++LTK DK+ + L K + +++ ++ SS Sbjct: 146 MKDLDQQMIFWAIESRLPVLVLLTKADKMKSGARKAQLLKVRESSKSF-GGDVQIELFSS 204 Query: 194 VKRKGIEVLRKAILETIN 211 +K G++ +R+ + Sbjct: 205 LKGIGLDQVRRKLDTWFG 222 >gi|56964398|ref|YP_176129.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus clausii KSM-K16] gi|81822069|sp|Q5WEP2|ENGB_BACSK RecName: Full=Probable GTP-binding protein EngB gi|56910641|dbj|BAD65168.1| GTP-binding protein [Bacillus clausii KSM-K16] Length = 197 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 100/193 (51%), Gaps = 11/193 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + PK PE+A +GRSNVGKSS IN ++NRK LARTS PG+TQ LNF+ + Sbjct: 12 AVKAEQYPKNQLPELALAGRSNVGKSSFINKMLNRKGLARTSGQPGKTQTLNFYEINER- 70 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + VD+PGYGYA+ K +WG +I YLSER L+ V L+D RH + Sbjct: 71 --------LYFVDVPGYGYAKVSKTERAAWGKMIETYLSEREELKAVLQLVDIRHRPSED 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ +++++ + +V TK DK+ Q+ L + A ++ SS Sbjct: 123 DQLMYNWMKHYGIPVILVATKADKIPKGKWQKQLTAIAKTLDK--EASDPLLFFSSATGL 180 Query: 198 GIEVLRKAILETI 210 G + + IL + Sbjct: 181 GKDEAWRTILNHL 193 >gi|294651641|ref|ZP_06728945.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter haemolyticus ATCC 19194] gi|292822490|gb|EFF81389.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter haemolyticus ATCC 19194] Length = 258 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDTGYEIAFAGRSNAGKSSAINALTNKKQLARASKKPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPESMKIVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A +TL K ++ + SS Sbjct: 158 LQHFDLMMLEWAHSRHLFVHILLTKADKLNRGPANKTLLDVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + R G+E L + +NY Sbjct: 217 LNRIGLEELASVMAGRLNY 235 >gi|226953864|ref|ZP_03824328.1| GTPase, involved in coordination of cell cycle (EngB) [Acinetobacter sp. ATCC 27244] gi|226835347|gb|EEH67730.1| GTPase, involved in coordination of cell cycle (EngB) [Acinetobacter sp. ATCC 27244] Length = 258 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDTGYEIAFAGRSNAGKSSAINALTNKKQLARASKKPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPESMKIVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A +TL K ++ + SS Sbjct: 158 LQHFDLMMLEWAHSRHLFVHILLTKADKLNRGPANKTLLDVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + R G+E L + +NY Sbjct: 217 LNRIGLEELASVMAGRLNY 235 >gi|331086217|ref|ZP_08335299.1| GTP-binding protein engB [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406376|gb|EGG85890.1| GTP-binding protein engB [Lachnospiraceae bacterium 9_1_43BFAA] Length = 205 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 12/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ + Sbjct: 16 SKLPENDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ +K WG LI +YL LR V+LLID RH D+ + Sbjct: 70 ---EMYLVDLPGYGYAKVSEKEKIQWGKLIEKYLHTSKQLRAVFLLIDIRHEPSANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + I+ TK+DK+ + Q+ ++ K ++ P VIP SS ++G + Sbjct: 127 YQWIVDQGYNPIIIATKLDKIKRSQVQKHVKMIKEGLQLVPGT--TVIPFSSETKQGRDE 184 Query: 202 LRKAIL-ETIN 211 + + E +N Sbjct: 185 IWDLVEREFLN 195 >gi|299535611|ref|ZP_07048932.1| GTP-binding protein [Lysinibacillus fusiformis ZC1] gi|298728811|gb|EFI69365.1| GTP-binding protein [Lysinibacillus fusiformis ZC1] Length = 193 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ G PE A +GRSNVGKSS IN ++ RK LAR S+ PG+TQ LNF+ + Sbjct: 9 VISAVRPDQYPEDGLPEFALAGRSNVGKSSFINRMIGRKALARISSKPGKTQTLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K ++WG +I RY + R L+ V +ID RH Sbjct: 69 E---------QLFFVDVPGYGYAKVSKTEREAWGKMIERYFTGRQELKAVVQIIDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ ++ FL + ++ TK DK+ + + K + +I SS Sbjct: 120 TADDRMMYDFLKHYNIPCIVIATKADKIPKGKWDKHKKIVKETLE--LEKSDPLIVFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 G E K I + Sbjct: 178 TGLGFEEAWKTIENKM 193 >gi|319651744|ref|ZP_08005870.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2] gi|317396563|gb|EFV77275.1| GTP-binding protein [Bacillus sp. 2_A_57_CT2] Length = 193 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P++ PE A +GRSNVGKSS IN ++NR+ LAR S+ PG+TQ LNF++ Sbjct: 9 VISAVKPDQYPESELPEFALAGRSNVGKSSFINKMLNRRGLARISSKPGKTQTLNFYLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ KK ++WG +I YL+ R L+ V L++D RH Sbjct: 69 EI---------LHFVDVPGYGYAKVSKKEREAWGKMIETYLTSREQLKAVVLIVDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + ++ TK DK+ + Q+ ++ TK + P ++I SS Sbjct: 120 SSDDVMMYDFLKHYDIPCVVIATKADKIPKSKWQKHMKITKETLDIDPN--DQIIMFSSE 177 Query: 195 KRKGIEVLRKAI 206 G + A+ Sbjct: 178 TGYGKDKAWSAL 189 >gi|229543652|ref|ZP_04432712.1| small GTP-binding protein [Bacillus coagulans 36D1] gi|229328072|gb|EEN93747.1| small GTP-binding protein [Bacillus coagulans 36D1] Length = 194 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PEIA +GRSNVGKSS IN ++NRK LARTS+ PG+TQ LNF+ Sbjct: 9 VISAVRQEQYPEGHLPEIALAGRSNVGKSSFINKMINRKALARTSSKPGKTQTLNFYKI- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + VD+PGYG+A+ KK + WG +I Y++ R L+ V L++D RH Sbjct: 68 --------ENKLYFVDVPGYGFAKVSKKEREKWGRMIETYMTSRKQLKTVVLIVDVRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D +++FL + +V TK DK+ L+ K + E+I SS Sbjct: 120 TNDDCLMYNFLKYYKIPCIVVATKADKIPKGKWASHLKTAKETLN--LEKEDEIILFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 +G + + +++E I Sbjct: 178 TGEGKDKVWASLMERI 193 >gi|153813471|ref|ZP_01966139.1| hypothetical protein RUMOBE_03891 [Ruminococcus obeum ATCC 29174] gi|149830415|gb|EDM85507.1| hypothetical protein RUMOBE_03891 [Ruminococcus obeum ATCC 29174] Length = 201 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 11/186 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P G PE+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ D + Sbjct: 16 SKIPDTGLPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFYKINDELD--- 72 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYAR + WG +I YL L+ V+LLID RH D+ + Sbjct: 73 ------LVDLPGYGYARVTPAEKEKWGKMIENYLHTSHNLKAVFLLIDIRHDPSANDRQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DKL + Q+ L+ + ++ VIP S+ ++G + Sbjct: 127 YEWILHNGYEPIIIATKLDKLKRSQVQKNLKAIREGLQLKKGT--TVIPYSAETKQGRDE 184 Query: 202 LRKAIL 207 + + I Sbjct: 185 IWELIE 190 >gi|319902362|ref|YP_004162090.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides helcogenes P 36-108] gi|319417393|gb|ADV44504.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides helcogenes P 36-108] Length = 201 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 97/202 (48%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ ++ P PE AF GRSNVGKSSLIN+L N K LA TS PG+T +N Sbjct: 4 SNAEFVISNTDVKKCPPGTFPEYAFIGRSNVGKSSLINMLTNHKGLAMTSATPGKTMLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYGYA+ +K + +I Y+ +R + +++L+D Sbjct: 64 HFLIN---------KNWYLVDLPGYGYAKRGQKGQEQIQNIIRSYILQREQMTNLFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R + ID D +L + V + IV TK DK+ + + + P Sbjct: 115 SRLEPQAIDLDFIEWLGENGVPFAIVFTKGDKMKGGRLNANIRQYLKKLEEQWEELPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS R G E L I E IN Sbjct: 175 ITSSENRMGREELLDYI-EKIN 195 >gi|325662425|ref|ZP_08151031.1| GTP-binding protein engB [Lachnospiraceae bacterium 4_1_37FAA] gi|325471259|gb|EGC74483.1| GTP-binding protein engB [Lachnospiraceae bacterium 4_1_37FAA] Length = 205 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 12/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ + Sbjct: 16 SKLPENDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ +K WG LI +YL LR V+LLID RH D+ + Sbjct: 70 ---EMYLVDLPGYGYAKVSEKEKIQWGKLIEKYLHTSKQLRAVFLLIDIRHEPSANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + I+ TK+DK+ + Q+ ++ K ++ P VIP SS ++G + Sbjct: 127 YQWIVDQGYNPIIIATKLDKIKRSQVQKHVKMIKEGLQLVPGT--TVIPFSSETKQGRDE 184 Query: 202 LRKAIL-ETIN 211 + + E +N Sbjct: 185 IWDLVEREFLN 195 >gi|152981348|ref|YP_001355067.1| ribosome biogenesis GTP-binding protein YsxC [Janthinobacterium sp. Marseille] gi|166225961|sp|A6T3H0|ENGB_JANMA RecName: Full=Probable GTP-binding protein EngB gi|151281425|gb|ABR89835.1| GTP-binding protein EngB [Janthinobacterium sp. Marseille] Length = 235 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 12/210 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LPK PEIAF+GRSN GKS+ INIL N+K LA S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPKTQVPEIAFAGRSNAGKSTAINILCNQKKLAFASKTPGRTQHINYFSI 68 Query: 74 KD-------FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 K + LVD+PGYGYA W L+ Y+ R L + L Sbjct: 69 GGAHVGQHRKDETKVDEIRALLVDLPGYGYAEVSGSAKLHWQELLGDYVQRREQLAALVL 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R ++D + + +LTK DKL+ A L + ++ +Y + Sbjct: 129 IVDSRRPFTELDIQMLEWFAPTGKPIHCLLTKSDKLNRNDAANALRTARTILGSYVDENG 188 Query: 187 EVIP-----TSSVKRKGIEVLRKAILETIN 211 + P S++KR G++ I+E + Sbjct: 189 QPFPFTAQMFSALKRSGLDEANDKIIELLG 218 >gi|291280219|ref|YP_003497054.1| GTP-binding protein [Deferribacter desulfuricans SSM1] gi|290754921|dbj|BAI81298.1| GTP-binding protein [Deferribacter desulfuricans SSM1] Length = 191 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 103/199 (51%), Gaps = 12/199 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 +++ P PEIAF GRSNVGKSS+IN LVNRK L + S PG+T+ +NF Sbjct: 2 KAEYIKSAVYEKDYPDTDLPEIAFVGRSNVGKSSMINTLVNRKKLVKVSQKPGKTRTINF 61 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F D + VD+PGYGYA+ KK+ + W +I YL++RS L+ V L+ID Sbjct: 62 FNIND---------ELIFVDLPGYGYAKVSKKDRELWKVMIETYLTKRSQLKAVVLIIDI 112 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R G D+ ++ + V + TK DKLS Q+ L K + + + + Sbjct: 113 RVGPTNDDKLMYEWFMAYNVPTIVAFTKCDKLSNNKIQKQLAIIK---KEFGDGLGDYVL 169 Query: 191 TSSVKRKGIEVLRKAILET 209 SSV R+G + L I E Sbjct: 170 FSSVTRRGKDELWGIIKEK 188 >gi|269468141|gb|EEZ79848.1| cell division checkpoint GTPase YihA [uncultured SUP05 cluster bacterium] Length = 199 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 99/199 (49%), Gaps = 11/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + P E+ F+GRSN GKSS IN L +K LA+ S PGRTQHL FF Sbjct: 10 FLLSCPSLKGCPPDQGYEVIFAGRSNAGKSSAINTLTLQKKLAKVSRTPGRTQHLVFFEL 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ P++ W + Y ++R L+ L++DCR Sbjct: 70 DQNR---------RLVDLPGYGYAKVPERVKKQWHIDMSEYFNKRQCLKGAVLVMDCRRP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + DQ + + + QI+LTK DKL A K K I +P + +V SS Sbjct: 121 LTPFDQMMLDWCISINLPTQILLTKSDKLKKGAASNARLKVKRAIEQHP--YVDVQLFSS 178 Query: 194 VKRKGIEVLRKAILETINY 212 +K++G+E L + + Sbjct: 179 LKKQGLEELWTRLDTFFGH 197 >gi|86132597|ref|ZP_01051190.1| GTPase of unknown function [Dokdonia donghaensis MED134] gi|85816839|gb|EAQ38024.1| GTPase of unknown function [Dokdonia donghaensis MED134] Length = 201 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 106/200 (53%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ E+ P PE AF GRSNVGKSSLIN+L NRK+LA+TS PG+TQ +N Sbjct: 4 KSATFVVSNSEVSKCPNTRIPEYAFIGRSNVGKSSLINMLTNRKSLAKTSGRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGYAR KK+ + I Y +R + ++L+D Sbjct: 64 HFLINE---------NWHLVDLPGYGYARVSKKDKKYFQKFITDYFEQREQMISAFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEV 188 CRH ++ID + ++ +K + + I+ TK DKL P + +E+ K + + P Sbjct: 115 CRHEPQKIDMEFMEYMGEKEIPFSIIFTKADKLRPQALERNIEEYKRIMLEGVWWEFPNY 174 Query: 189 IPTSSVKRKGIEVLRKAILE 208 +SS G + + I E Sbjct: 175 FVSSSSDGTGQDEILNYIEE 194 >gi|325280017|ref|YP_004252559.1| GTP-binding protein engB [Odoribacter splanchnicus DSM 20712] gi|324311826|gb|ADY32379.1| GTP-binding protein engB [Odoribacter splanchnicus DSM 20712] Length = 204 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 102/199 (51%), Gaps = 9/199 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ + PK E AF GRSNVGKSSLIN+L N K LA+T+ PG+TQ +N Sbjct: 9 KAEFVVSNATVEKCPKPDRHEYAFIGRSNVGKSSLINMLTNNKKLAKTAARPGKTQLINH 68 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ D +VD+PGYGYAR + + +I Y+ +R L C+++LID Sbjct: 69 FLINDM---------WYMVDLPGYGYARTSETARRQFEKMIRDYILKRENLVCLFVLIDS 119 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + V + ++ TK DKLS T + ++ ++ P Sbjct: 120 RLEPQKIDLEFMEWLGENGVPFVMIFTKADKLSATQRLKCIDDYHKVMLETWETTPMAFM 179 Query: 191 TSSVKRKGIEVLRKAILET 209 TSS KR G E + I E Sbjct: 180 TSSEKRLGREEVLDYIDEL 198 >gi|329964825|ref|ZP_08301833.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fluxus YIT 12057] gi|328524466|gb|EGF51534.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fluxus YIT 12057] Length = 201 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 96/202 (47%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS+ PG+T +N Sbjct: 4 SNAEFVISNTDVEKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSSTPGKTMLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYGYA+ +K + +I Y+ R + +++LID Sbjct: 64 HFLIN---------KNWYLVDLPGYGYAKRGQKGQEQIQRIIESYILRRKQMTNLFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R + ID D +L + + + IV TK DKL + + P Sbjct: 115 SRLDPQAIDLDFIEWLGENGIPFSIVFTKADKLKGGRLNTHINLYLKKLHEQWEELPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TSS R G + L I E IN Sbjct: 175 VTSSENRMGRKELLDYI-EKIN 195 >gi|333030034|ref|ZP_08458095.1| GTP-binding protein engB [Bacteroides coprosuis DSM 18011] gi|332740631|gb|EGJ71113.1| GTP-binding protein engB [Bacteroides coprosuis DSM 18011] Length = 200 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E+ P G PE AF GRSNVGKSSLIN+L NRK LA TS PG+T +N F+ Sbjct: 8 FVISNTEVKKCPTDGLPEYAFIGRSNVGKSSLINMLTNRKGLAMTSAKPGKTMLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ +K +I Y+ ER+ + +++LIDCR Sbjct: 68 NE---------EWYIVDLPGYGYAKRNQKGQQQIKTIIEDYILERTAMTNLFVLIDCRLS 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +QID + +L + + + IV TK DKL+ +E ++ P TSS Sbjct: 119 PQQIDLEFIEWLGENNIPFSIVFTKGDKLTKNKLDSNVEAFLNELKKQWEELPPYFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 KR G + + I E IN Sbjct: 179 EKRMGRDEMLNYI-EQIN 195 >gi|229828302|ref|ZP_04454371.1| hypothetical protein GCWU000342_00360 [Shuttleworthia satelles DSM 14600] gi|229792896|gb|EEP29010.1| hypothetical protein GCWU000342_00360 [Shuttleworthia satelles DSM 14600] Length = 204 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LPK PE+AF+GRSNVGKSSLIN L+NRK+ ARTS+ PG+TQ +N++ D Sbjct: 17 SALPKNQLPEVAFAGRSNVGKSSLINALMNRKSYARTSSQPGKTQTINYYRIND------ 70 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYG+AR ++ ++WG +I +YL L V+LL+D RH D+ + Sbjct: 71 ---QIYCVDLPGYGFARVSREEKEAWGKMIEKYLVTSEQLAAVFLLLDIRHRPNANDKQM 127 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F ++ ++ TK DK+ + L + K ++ +IP S++ ++G E Sbjct: 128 FDWIQYMGYQAIVIATKADKIKRSQIPGQLRQMKEELK--ADEDTIIIPFSALTKQGRED 185 Query: 202 LRKAILETI 210 + + + I Sbjct: 186 IWDLMDQVI 194 >gi|212551105|ref|YP_002309422.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549343|dbj|BAG84011.1| GTPase EngB [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 209 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 111/200 (55%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +F+ G ++G P+ G PE AF GRSNVGKSSLIN+L +K LA TS+ PG+TQ +N Sbjct: 12 KNAVFVVGNTDVGKCPRDGFPEYAFIGRSNVGKSSLINMLTGQKGLALTSSIPGKTQLIN 71 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLI 128 +F+ + LVD+PGYGYA+ K+ + +I YL +R L C+++LI Sbjct: 72 YFLINN---------EWYLVDLPGYGYAQGGKQKRRTLQRIIDNYLCQRKKELTCIFVLI 122 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 DCRH ++ D + L + IV TKIDKLS + +E ++ + + P + Sbjct: 123 DCRHNPQKNDTEFIQQLGGNGFPFVIVFTKIDKLSNKSLKENIDVYQSTLLKNWEELPSI 182 Query: 189 IPTSSVKRKGIEVLRKAILE 208 TSS ++ G + + I E Sbjct: 183 FVTSSERKIGRDEILNYIEE 202 >gi|150026105|ref|YP_001296931.1| GTPase EngB [Flavobacterium psychrophilum JIP02/86] gi|166225953|sp|A6H1A5|ENGB_FLAPJ RecName: Full=Probable GTP-binding protein EngB gi|149772646|emb|CAL44129.1| Probable GTP-binding protein EngB [Flavobacterium psychrophilum JIP02/86] Length = 205 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 106/200 (53%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + L P+ PE AF GRSNVGKSSLIN+L N K+LA+TS PG+TQ +N Sbjct: 4 NTAEFIISNSIVSLCPQEHLPEYAFIGRSNVGKSSLINMLTNHKSLAKTSGRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD+PGYGYA+ KK + + I Y +R L C ++LID Sbjct: 64 HFKINN---------NWFLVDLPGYGYAKVSKKTKEVFQQFITDYFEKREQLVCAFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTAHPEV 188 RH ++ID + ++L + + + IV TK DK+S + + + L++N P Sbjct: 115 IRHEAQKIDLEFITYLGEIELPFCIVFTKADKISKGKVAQHVAAYRTALLKNNWEEMPHH 174 Query: 189 IPTSSVKRKGIEVLRKAILE 208 TS+ + G E L I E Sbjct: 175 FVTSATEHTGKESLLSYIDE 194 >gi|227529062|ref|ZP_03959111.1| GTPase [Lactobacillus vaginalis ATCC 49540] gi|227351074|gb|EEJ41365.1| GTPase [Lactobacillus vaginalis ATCC 49540] Length = 202 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 E P PEIA GRSNVGKSSL N+L+NR+N A TS+ PG+TQ LNF+ +D Sbjct: 14 ISAVESKQYPATNYPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYNVED 73 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ KK + +G +I YL+ R LR V L+D RH Sbjct: 74 ---------ELYFVDVPGYGYAKVSKKERERFGKMIEEYLTTRQQLRGVIQLVDGRHKPT 124 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D ++ +L + IV TKIDK+ P + P ++ S+VK Sbjct: 125 ADDVSMYQWLAYYDIPTLIVGTKIDKVKPNARNRVKNDIIKTLDLTPKT--PLVLFSAVK 182 Query: 196 RKGIEVLRKAILETIN 211 ++G + + I + I Sbjct: 183 KQGKDQVWNWIEQRIG 198 >gi|226942364|ref|YP_002797437.1| ribosome biogenesis GTP-binding protein YsxC [Azotobacter vinelandii DJ] gi|259645889|sp|C1DH55|ENGB_AZOVD RecName: Full=Probable GTP-binding protein EngB gi|226717291|gb|ACO76462.1| GTPase, MMR_HSR1 family [Azotobacter vinelandii DJ] Length = 216 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 94/198 (47%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P E+AF+GRSN GKSS +N L NLARTS PGRTQ LNFF Sbjct: 16 FMLSAARVDQCPADDGLEVAFAGRSNAGKSSALNTLT-HANLARTSKTPGRTQLLNFFRL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ P W + YL R +L V LL+D RH Sbjct: 75 DDRR---------RLVDLPGYGYAKVPIPLKQHWQHHLEAYLGSRRSLAGVVLLMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + + + I+LTK DKL+ A+ L K + I V S+ Sbjct: 126 LTDFDRMMLDWAGASGMPMHILLTKADKLAFGAAKNALLKVRREIHKGWGEGMSVQLFSA 185 Query: 194 VKRKGIEVLRKAILETIN 211 KR+G+E + + Sbjct: 186 PKRQGVEEAHDVLARWLG 203 >gi|148653688|ref|YP_001280781.1| HSR1-like GTP-binding protein [Psychrobacter sp. PRwf-1] gi|148572772|gb|ABQ94831.1| cell division checkpoint GTPase YihA [Psychrobacter sp. PRwf-1] Length = 232 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P L P E+AF+GRSN GKSS IN+L N++ LAR+S PGRTQ +NFF Sbjct: 38 FLMSAPTFKLCPPDTGYEVAFAGRSNAGKSSAINVLTNQRQLARSSKTPGRTQMINFFTI 97 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P+K W + YL R +L + LL+D RH Sbjct: 98 GNE--------EARLVDLPGYGYAAVPEKMKLVWQTELEEYLVSRESLAGLVLLMDSRHP 149 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + ++LTK DK A+ L +TK + + SS Sbjct: 150 LKFFDEQMLRWAKDGELPVHVLLTKADKFKYGPAKNILLQTKRELEKLDLPF-SIQLFSS 208 Query: 194 VKRKGIEVLRKAILETI 210 +K++GI+ L + + + Sbjct: 209 LKKEGIDELSEVMGRWL 225 >gi|15838031|ref|NP_298719.1| ribosome biogenesis GTP-binding protein YsxC [Xylella fastidiosa 9a5c] gi|9106445|gb|AAF84239.1|AE003973_7 GTP-binding protein [Xylella fastidiosa 9a5c] Length = 229 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 9/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 36 YLLSAHTTHQLPADDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTV 95 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P LVD+PGYGYA+ PK+ W I Y +R LR + +++D RH Sbjct: 96 T---------PQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHP 146 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D + ++ ++ + Q +LTK DKL +TL+K + + + H + SS Sbjct: 147 LKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSS 206 Query: 194 VKRKGIEVLRKAILETIN 211 R+G+E L I + Sbjct: 207 KSRQGVEQLHTVIETWLG 224 >gi|13124224|sp|Q9PDE9|ENGB_XYLFA RecName: Full=Probable GTP-binding protein EngB Length = 203 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 9/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L LP E+AF+GRSN GKSS++N L + LAR S PGRTQ L +F Sbjct: 10 YLLSAHTTHQLPADDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYFTV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P LVD+PGYGYA+ PK+ W I Y +R LR + +++D RH Sbjct: 70 T---------PQRYLVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D + ++ ++ + Q +LTK DKL +TL+K + + + H + SS Sbjct: 121 LKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 R+G+E L I + Sbjct: 181 KSRQGVEQLHTVIETWLG 198 >gi|332970221|gb|EGK09214.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter sp. 1501(2011)] Length = 234 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P L P E+AF+GRSN GKSS IN+L N++ LAR+S PGRTQ +NFF Sbjct: 38 FLMSAPTFKLCPADTGYEVAFAGRSNAGKSSAINVLTNQRQLARSSKTPGRTQMINFFSI 97 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P+K W + YL R +L + LL+D RH Sbjct: 98 GNE--------EARLVDLPGYGYAAVPEKMKLVWQTELEEYLVSRESLAGLVLLMDSRHP 149 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + ++LTK DK A+ L +TK + + SS Sbjct: 150 LKFFDEQMLHWAKDGELPVHVLLTKADKFKYGPAKNILLQTKRELEKLDLPF-SIQLFSS 208 Query: 194 VKRKGIEVLRKAILETI 210 +K++GI+ L + + + Sbjct: 209 LKKEGIDELAEVMGRWL 225 >gi|253997962|ref|YP_003050025.1| ribosome biogenesis GTP-binding protein YsxC [Methylovorus sp. SIP3-4] gi|313200029|ref|YP_004038687.1| GTP-binding protein hsr1-like protein [Methylovorus sp. MP688] gi|253984641|gb|ACT49498.1| GTP-binding protein HSR1-related [Methylovorus sp. SIP3-4] gi|312439345|gb|ADQ83451.1| GTP-binding protein HSR1-related protein [Methylovorus sp. MP688] Length = 212 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 12/206 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F + F + LP E+AF+GRSN GKSS +N + N LA S PGR Sbjct: 2 PLFQNA--TFHISAHHLSDLPPPFGIEVAFAGRSNAGKSSALNTMANHNRLAFVSKQPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +NFF LVD+PGYGYA+ P+ W + YLS RS+L + Sbjct: 60 TQLINFFSLG---------GDRFLVDLPGYGYAKVPESMRKHWQMTLSNYLSHRSSLYGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D RH + +D+ + + ++LTK DKLS + A TL + + Sbjct: 111 VLVMDSRHPLTPLDRQMLDWFGPSGKPIHVLLTKSDKLSRSAAMLTLNAVRKELNTTW-G 169 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 + V SS+K++G+E I + + Sbjct: 170 NCSVQLFSSLKKQGVEEAEAVIGKWL 195 >gi|322421712|ref|YP_004200935.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M18] gi|320128099|gb|ADW15659.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M18] Length = 211 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 12/198 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++ P+ PEIAF+GRSNVGKSSL+N+LVNRK+L RTS+ PGRTQ +NFF Sbjct: 7 QFIKSATRPAHYPEGNLPEIAFAGRSNVGKSSLVNVLVNRKSLVRTSSTPGRTQLINFFQ 66 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ P W ++ YL++R+ LR V L++D R Sbjct: 67 VND---------DFMLVDLPGYGYAKVPLAVKKDWRPMMETYLAKRANLRGVVLILDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + ++L +V IV+TK DKLS +T + ++ S Sbjct: 118 VPNEDDLQMLAWLRAYSVPPIIVVTKCDKLSKNERAR---QTAVITATLGVEKGDLTFFS 174 Query: 193 SVKRKGIEVLRKAILETI 210 ++ ++G + + I + Sbjct: 175 ALSKEGKDAVWARIDAAL 192 >gi|237807113|ref|YP_002891553.1| ribosome biogenesis GTP-binding protein YsxC [Tolumonas auensis DSM 9187] gi|259645909|sp|C4L968|ENGB_TOLAT RecName: Full=Probable GTP-binding protein EngB gi|237499374|gb|ACQ91967.1| GTP-binding protein HSR1-related [Tolumonas auensis DSM 9187] Length = 212 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 106/196 (54%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP G EIAF+GRSN GKSS +N L ++ LARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPNDGGIEIAFAGRSNAGKSSALNALTQQRQLARTSKTPGRTQLINLFEL 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P LVD+PGYGYA+ P + W + YL +R +L+ + LL+D RH Sbjct: 73 ---------EPGKRLVDLPGYGYAQVPIEMKLKWQAALSEYLQKRESLKALVLLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + + ++ ++LTK DKL+P + +++ + + + V SS Sbjct: 124 LKDLDLQMLEWASNSDLNILVLLTKADKLNPGPRKTVVQQVRKATMVFGDS-VRVEAFSS 182 Query: 194 VKRKGIEVLRKAILET 209 +K G++ + + + + Sbjct: 183 LKGTGVDEVTRILSDW 198 >gi|149376397|ref|ZP_01894159.1| predicted GTPase [Marinobacter algicola DG893] gi|149359238|gb|EDM47700.1| predicted GTPase [Marinobacter algicola DG893] Length = 212 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ FL + P E+AF+GRSN GKSS IN + LARTS PGRT+ +N Sbjct: 17 NSARFLISASRLEECPPDHGSEVAFAGRSNAGKSSAINCITTNGKLARTSKTPGRTRLIN 76 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF LVD+PGYGYA+ + D W + YL++R LR + L++D Sbjct: 77 FFSLN--------RENCRLVDLPGYGYAKVSRDMKDDWQQHLGHYLNDRRCLRGLVLVMD 128 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + DQ + + + + I+ TK DKL A+ + + + +I Sbjct: 129 IRHPLTDFDQMMVEWCEHNNLPLMILATKADKLKFGQAKTAMMGISKKLEAFQ-CVEHLI 187 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ ++G++ R+A+ + Sbjct: 188 MFSATSKRGVDECREALTAWL 208 >gi|73542832|ref|YP_297352.1| GTPase EngB [Ralstonia eutropha JMP134] gi|119369239|sp|Q46WH5|ENGB_CUPPJ RecName: Full=Probable GTP-binding protein EngB gi|72120245|gb|AAZ62508.1| cell division checkpoint GTPase YihA [Ralstonia eutropha JMP134] Length = 228 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSRTPGRTQHINYFTV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +K P LVD+PGYGYA W GL+ Y+ RS L + L++D R Sbjct: 69 ---APVKAPDPIAFLVDLPGYGYAEVSGSAKYHWQGLLSDYVQTRSQLSGLILMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP--- 190 +D + + ++LTK DKL+ + + L +T+ ++ Y +P Sbjct: 126 FTDLDCQMVEWFLPTGKPVHVLLTKADKLTNSENAKALRETRKMLEGYAEQLATPVPLTA 185 Query: 191 --TSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ I + Sbjct: 186 QLFSSLKRRGIEEAQRVIAGWL 207 >gi|317478908|ref|ZP_07938055.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 4_1_36] gi|316904885|gb|EFV26692.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 4_1_36] Length = 219 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 100/198 (50%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ Sbjct: 25 FVISNTDVRKCPTGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLI 84 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ +K + +I Y+ +R + C+++LID R Sbjct: 85 N---------KSWYIVDLPGYGYAKRGQKGQEQIKRIIESYILQREQMTCLFVLIDSRLA 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ID + +L + V + IV TK DKL + + ++ P TSS Sbjct: 136 PQAIDLEFTEWLGENGVPFAIVFTKADKLKGGRLNTHINEYLEQLKEQWEELPPYFITSS 195 Query: 194 VKRKGIEVLRKAILETIN 211 R G + L I E+IN Sbjct: 196 ENRMGRKELLDYI-ESIN 212 >gi|167765941|ref|ZP_02437994.1| hypothetical protein CLOSS21_00432 [Clostridium sp. SS2/1] gi|167712439|gb|EDS23018.1| hypothetical protein CLOSS21_00432 [Clostridium sp. SS2/1] Length = 213 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +N++ + Sbjct: 29 SKLPDNTLPEVAFAGKSNVGKSSLINALMNRKSYARISAQPGKTQTINYYNINE------ 82 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYG+A+ + + WG +I YL L+ V+LLID RH + D + Sbjct: 83 ---ELYYVDLPGYGFAKVTQSVKEKWGHMIENYLQTSKQLKMVFLLIDIRHKPSKNDVMM 139 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DKL + + L++ + ++ + P S++ ++G + Sbjct: 140 YDWILHNGYRPVIIATKLDKLKRSQVPKHLKEIRTELQM--DKETPIFPFSALSKQGRDE 197 Query: 202 LRKAILETI 210 + I + Sbjct: 198 IWDFIESMV 206 >gi|297616506|ref|YP_003701665.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophothermus lipocalidus DSM 12680] gi|297144343|gb|ADI01100.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophothermus lipocalidus DSM 12680] Length = 198 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 13/202 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F +I LP +G PEIA +GRSNVGKSSLIN L NR+NLA TS+ PG+T+ +N Sbjct: 7 KKAEFKGSYVDIESLPASGLPEIALAGRSNVGKSSLINCLANRRNLALTSSTPGKTRTIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +++ D A LVD+PGYGYA+ + W LI +YL ER L+ V ++D Sbjct: 67 YYLFDD---------AWFLVDLPGYGYAKVSQAERKRWSLLIEKYLKERRQLKGVVQVVD 117 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + +L + +V TK DK++ + L + +R + Sbjct: 118 IRHHPTETDKLMSEWLGYHQIPRTVVATKADKIARGKWKTQLAAIQRELR----LSDPPL 173 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 SS+ +G + L +AI E + Sbjct: 174 CFSSLTGEGRDELVRAIGEMVG 195 >gi|326335701|ref|ZP_08201887.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692130|gb|EGD34083.1| ribosome biogenesis GTP-binding protein YsxC [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 200 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ +I P G E AF GRSNVGKSSLIN+L N K LA+TS+ PG+TQ +N F+ Sbjct: 8 FVMSNTQIAKCPAHGLAEYAFIGRSNVGKSSLINMLTNHKGLAKTSSKPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ K++ + I Y +R L C ++L+D RH Sbjct: 68 N---------KNWYLVDLPGYGYAQVSKQSKRVFQQFITDYFKKRKELVCAFVLVDIRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L + + + I+ TK DKL+ +E + + ++ P +SS Sbjct: 119 PQKIDLEFMQWLGENTIPFAIIFTKADKLTDKLIEEHITAYQGILLEQWEEMPPYFISSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 V + G + I E IN Sbjct: 179 VNKLGRTEILNYI-EDIN 195 >gi|270291412|ref|ZP_06197634.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus acidilactici 7_4] gi|304385125|ref|ZP_07367471.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus acidilactici DSM 20284] gi|270280258|gb|EFA26094.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus acidilactici 7_4] gi|304329319|gb|EFL96539.1| ribosome biogenesis GTP-binding protein YsxC [Pediococcus acidilactici DSM 20284] Length = 195 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + P+ G PEIA GRSNVGKSSL N L+NRK+ ARTS+ PG+TQ LNF+ +D Sbjct: 10 ISAVKPEQYPEQGYPEIALVGRSNVGKSSLTNTLINRKSYARTSSQPGKTQTLNFYRVED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ +K + WG +I +YL+ R L+ V L+D RH Sbjct: 70 ---------QLFFVDVPGYGYAKVSQKEREKWGRMIEKYLTSRKELKGVISLVDARHDPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D ++ +L + +V TK DK++ + + K ++ S+ Sbjct: 121 DDDISMYQYLRYYDIPVLVVATKSDKIARGKWNQHESRIKKVLN--FDQQDAFQMFSAQT 178 Query: 196 RKGIEVLRKAILETIN 211 + G + + + I + + Sbjct: 179 KFGKDAIWQWIEDRMG 194 >gi|163787480|ref|ZP_02181927.1| GTP-binding protein [Flavobacteriales bacterium ALC-1] gi|159877368|gb|EDP71425.1| GTP-binding protein [Flavobacteriales bacterium ALC-1] Length = 204 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 9/197 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ E+ PK PE AF GRSNVGKSSLIN+L +RK+LA+TS PG+TQ +N Sbjct: 4 KSAKFVVSNSEVAKCPKDSLPEYAFIGRSNVGKSSLINMLTDRKSLAKTSGRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + + LVD+PGYGYAR K + + I Y +R L ++L+D Sbjct: 64 HFIINE---------SWYLVDLPGYGYARVSKSSKKKFQKFITNYFEKRQQLISAFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + ID + +L + + + I+ TK DKL P + + P+ Sbjct: 115 IRHKPQPIDLEFMQYLGESGIPFGIIFTKADKLKPMAIDRHVNNYCEELLKTWEEVPQYF 174 Query: 190 PTSSVKRKGIEVLRKAI 206 TSS K G E + + I Sbjct: 175 VTSSSKHIGKEDVLEFI 191 >gi|256619397|ref|ZP_05476243.1| GTP-binding protein [Enterococcus faecalis ATCC 4200] gi|256598924|gb|EEU18100.1| GTP-binding protein [Enterococcus faecalis ATCC 4200] Length = 193 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P++ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNF++ + Sbjct: 9 VISAVSPKQYPESQLPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTLNFYLIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D A+ VD+PGYGYA+ K WG +I Y+++R LR V LID RH Sbjct: 69 D---------ALHFVDVPGYGYAKVSKTERAKWGKMIETYITQREQLRAVVSLIDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL + IV TK DK+ + K + + I SS Sbjct: 120 TQDDIQMYEFLKYYDLPVIIVATKADKIPRGKWNKHESVIKKALN--FDKQDDFIIFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 ++G E AI + + Sbjct: 178 IKEGKEAAWTAIEKFL 193 >gi|255037700|ref|YP_003088321.1| GTP-binding protein HSR1-related [Dyadobacter fermentans DSM 18053] gi|254950456|gb|ACT95156.1| GTP-binding protein HSR1-related [Dyadobacter fermentans DSM 18053] Length = 202 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 104/198 (52%), Gaps = 9/198 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ + P+ PE AF GRSNVGKSSLIN+L ++K LA+TS PG+TQ +N Sbjct: 4 QEARYVMSNSDYQKCPEPVLPEYAFIGRSNVGKSSLINMLTSKKALAKTSQQPGKTQMIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ D A LVD+PGYGYA+ K + W +I YL R L C ++L+D Sbjct: 64 HFIIDD---------AWYLVDLPGYGYAKVSKVEREKWEKMIHDYLHYRENLICTFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +D + + L + + ++I+ TK DKL P +E K + PE+ Sbjct: 115 VRHSAMAVDLNFMAALGEAGIPFEIIFTKADKLKPAQVASQVEAYKRKMAELWEEVPEMY 174 Query: 190 PTSSVKRKGIEVLRKAIL 207 TS+ K +G E + AI Sbjct: 175 VTSAEKNEGREPILTAIE 192 >gi|288800196|ref|ZP_06405655.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 299 str. F0039] gi|288333444|gb|EFC71923.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella sp. oral taxon 299 str. F0039] Length = 203 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ P + P E AF GRSNVGKSSLIN+L K LA+TS+ PG+T +N Sbjct: 4 KKSEFVVSSPTVSKCPTDNKYEYAFIGRSNVGKSSLINMLCTHKGLAKTSSKPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGYA+ K +I +Y+ +R L +++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGYAKQSKAVQKKLQQMISQYILQREQLINLFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID++ +L V + I+ TK DKL P AQ+ +++ P Sbjct: 115 IRHPQQKIDREFIDWLGASQVPFTIIFTKADKLGPVAAQKNASAWMRALQDAWEELPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TS+ K+ G E + I + Sbjct: 175 ITSAEKKTGKEEVLNYISQ 193 >gi|170749902|ref|YP_001756162.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium radiotolerans JCM 2831] gi|170656424|gb|ACB25479.1| GTP-binding protein HSR1-related [Methylobacterium radiotolerans JCM 2831] Length = 217 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 92/191 (48%), Positives = 112/191 (58%), Gaps = 9/191 (4%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + LP EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ LNFF + Sbjct: 31 TLDRLPPMEGVEIAFAGRSNVGKSSLINALTGRNTLARTSHTPGRTQQLNFFRIGER--- 87 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 ++LVDMPGYGYA K V++W LI YL R+ L V++LID RHG K ID Sbjct: 88 ------LSLVDMPGYGYAAVEKAKVEAWTRLIHSYLKGRTNLARVFMLIDARHGFKSIDT 141 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 DV LDK AVSYQ+VLTK D L + + + P A+P+VI TSS G+ Sbjct: 142 DVLDGLDKAAVSYQVVLTKGDSLKKGEVASRIAGIEAGLAKRPAAYPQVILTSSRDDSGV 201 Query: 200 EVLRKAILETI 210 LR AI + + Sbjct: 202 PDLRAAIAKLL 212 >gi|319953730|ref|YP_004164997.1| gtp-binding protein engb [Cellulophaga algicola DSM 14237] gi|319422390|gb|ADV49499.1| GTP-binding protein engB [Cellulophaga algicola DSM 14237] Length = 208 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 10/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + PK PE AF GRSNVGKSSLIN+L ++K+LA+TS PG+TQ +N Sbjct: 4 KSAEFVMSNSNVTNCPKEAIPEYAFIGRSNVGKSSLINMLTDKKSLAKTSGRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F D + LVD+PGYGYAR K++ ++ I Y ER L ++L+D Sbjct: 64 HFKIND---------SWYLVDLPGYGYARVSKRDKKTFQRYITDYFRERKQLVSAFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEV 188 RH +++D + ++ + + + IV TK DKL P + ++ +L+ + P Sbjct: 115 IRHEPQKVDLEFLEWMGENQIPFSIVFTKADKLKPNVIERNVQTYIDHLLESMWQEAPNY 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 TS+ K G + + I Sbjct: 175 FITSASKNIGQDEVLDYI 192 >gi|291087566|ref|ZP_06346804.2| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. M62/1] gi|291074656|gb|EFE12020.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. M62/1] Length = 218 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PE AF+G+SNVGKSSLIN L+NRK+ ARTS PG+TQ +NF+ D Sbjct: 29 SRLPANTQPEFAFAGKSNVGKSSLINALMNRKSYARTSAQPGKTQTINFYHIND------ 82 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 A+ VD+PGYGYARA ++ WG +I YL + L+CV+LLID RH + D+ + Sbjct: 83 ---ALYYVDLPGYGYARANEEVKAKWGKMIENYLHKSPMLKCVFLLIDIRHEPSENDRLM 139 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 +S++ + I+ TK+DKL + + ++ + + P +IP S+ ++G E Sbjct: 140 YSWIQNQGYRPVIIATKLDKLKRSQVPKHVKMVRTGLGMGPEDL--LIPFSAETKQGREE 197 Query: 202 LRKAILET 209 + I +T Sbjct: 198 IWDFIEKT 205 >gi|113869399|ref|YP_727888.1| ribosome biogenesis GTP-binding protein YsxC [Ralstonia eutropha H16] gi|123133546|sp|Q0K651|ENGB_CUPNH RecName: Full=Probable GTP-binding protein EngB gi|113528175|emb|CAJ94520.1| Predicted GTPase [Ralstonia eutropha H16] Length = 233 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 8/203 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F Sbjct: 9 FFITVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSRTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +K P LVD+PGYGYA W GL+ Y+ R L + L++D R Sbjct: 69 ---APVKAPDPLAFLVDLPGYGYAEVSGSAKYHWQGLLSDYVQTRQQLSGLILMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP--- 190 +D + + ++LTK DKL+ + + L +T+ +++ Y +P Sbjct: 126 FTDLDCQMVEWFLPTGRPIHVLLTKADKLTNSDNAKALRETRKMLQGYAEQMETPVPMTA 185 Query: 191 --TSSVKRKGIEVLRKAILETIN 211 SS+KR+GIE + I +N Sbjct: 186 QLFSSLKRRGIEEAQGVIAGWLN 208 >gi|259503089|ref|ZP_05745991.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus antri DSM 16041] gi|259168955|gb|EEW53450.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus antri DSM 16041] Length = 196 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 107/193 (55%), Gaps = 11/193 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + PK PEIA GRSNVGKSSL N+L+NR+N A TS+ PG+TQ LNF+V +D Sbjct: 10 ISAVRLDQYPKTNYPEIALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYVVED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ KK + +G +I +YL++R LR LL+D RH Sbjct: 70 ---------QLYFVDVPGYGYAKVSKKERERFGQMIEQYLTQRDQLRGTILLVDGRHAPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D ++ +L + +V TKIDK+ K + P+A+ ++I S+VK Sbjct: 121 ADDVSMYQWLQYYHIPTLVVATKIDKVKGNAWNRQESLIKKTLG-LPSAN-QLILFSAVK 178 Query: 196 RKGIEVLRKAILE 208 + G + + + I E Sbjct: 179 KTGKDAVWQWIDE 191 >gi|326790234|ref|YP_004308055.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium lentocellum DSM 5427] gi|326540998|gb|ADZ82857.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium lentocellum DSM 5427] Length = 196 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 11/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P PEIAF+G+SNVGKSSL+N ++NRK LARTS+ PG+TQ +NF+ + Sbjct: 9 IITAGLSSQFPVHDMPEIAFAGKSNVGKSSLLNAMLNRKALARTSSQPGKTQTINFYNVQ 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D VD+PGYGYA+ K + + WG LI YL +R L+ + LLID RH V Sbjct: 69 D---------TYMFVDLPGYGYAKVSKTDRERWGKLIEGYLEKREQLKKIILLIDIRHEV 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ ++ ++ +V TK+DK+ + Q+ L + + P +++ SS Sbjct: 120 GNNDKMMYDWIKHYHNEVIVVATKMDKIKRSQVQKHLSMIRKGLNLMPE--DKLVGFSSE 177 Query: 195 KRKGIEVLRKAILE 208 ++G E L K I E Sbjct: 178 TKQGKEELWKIIEE 191 >gi|186477556|ref|YP_001859026.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia phymatum STM815] gi|238691302|sp|B2JI34|ENGB_BURP8 RecName: Full=Probable GTP-binding protein EngB gi|184194015|gb|ACC71980.1| GTP-binding protein HSR1-related [Burkholderia phymatum STM815] Length = 220 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 103/208 (49%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP + PE+AF+GRSN GKS+ INIL N+K LA S PGRTQ Sbjct: 3 FLLHQARFFTTVNHLRDLPPSPQPEVAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL RS LR + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEQLLSTYLQTRSQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L TK + Y A Sbjct: 118 MMDSRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVNALRATKKGLDEYRAAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + S++KR G++ + I I Sbjct: 178 QGELTAQLFSALKRIGLDEAHELIESWI 205 >gi|255024637|ref|ZP_05296623.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes FSL J1-208] Length = 194 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ + Sbjct: 9 IISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH Sbjct: 69 E---------ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ ++ FL + +V TK DK+ + Q+ + + + P + + SS Sbjct: 120 TEDDRMMYEFLKYYDIPVIVVATKADKIPRSKWQKNAKIVRETLDFDP--DDKFVLFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 + G + + I E I Sbjct: 178 TKMGKDEAWQFIKEGI 193 >gi|238025963|ref|YP_002910194.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia glumae BGR1] gi|237875157|gb|ACR27490.1| Probable GTP-binding protein eng [Burkholderia glumae BGR1] Length = 219 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVIPEIAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL R LR + L Sbjct: 63 HINYFSVGPEAE-----PVANLVDLPGYGYAEVPGAAKAHWEALLSAYLKTRPQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++DQ + + +LTK DKL+ + L TK + Y A Sbjct: 118 MMDSRRPLTELDQRMIEWFAPTGKPIHTLLTKCDKLTRQESVNALRNTKKALAAYRDAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 E V S++KR G++ I + Sbjct: 178 EGELTVQLFSALKRTGLDEAHALIESWL 205 >gi|251798420|ref|YP_003013151.1| ribosome biogenesis GTP-binding protein YsxC [Paenibacillus sp. JDR-2] gi|247546046|gb|ACT03065.1| small GTP-binding protein [Paenibacillus sp. JDR-2] Length = 201 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 100/199 (50%), Gaps = 11/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LN++ Sbjct: 8 FIISAVRPSQYPVDALPEIALAGRSNVGKSSLINKLILRKNLARTSSQPGKTQQLNYYRV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD PGYGYA+ K + +G +I Y+ +R L+ L+ID RH Sbjct: 68 NDM---------VYFVDFPGYGYAKVSKTQRELFGQMIETYIRDRKELKLQLLVIDMRHA 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ +L V IV TK DK+ + ++ K + P ++ SS Sbjct: 119 PSKDDVLMYHWLKHYNVPTCIVCTKADKIPKGKWDKHVKVIKETLEADP--RDSLVMFSS 176 Query: 194 VKRKGIEVLRKAILETINY 212 G E L + I I + Sbjct: 177 ETGLGREKLWEVINGAIGH 195 >gi|134096290|ref|YP_001101365.1| ribosome biogenesis GTP-binding protein YsxC [Herminiimonas arsenicoxydans] gi|166225960|sp|A4G9Q7|ENGB_HERAR RecName: Full=Probable GTP-binding protein EngB gi|133740193|emb|CAL63244.1| Putative GTP-binding protein [Herminiimonas arsenicoxydans] Length = 239 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 96/210 (45%), Gaps = 12/210 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PEIAF+GRSN GKS+ INIL N+K L S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPNTQVPEIAFAGRSNAGKSTAINILSNQKKLCFASKTPGRTQHINYFSI 68 Query: 74 KDFSNLKNNLPAM-------ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 ++ LVD+PGYGYA W L+ Y+ R L + L Sbjct: 69 GGAHVGQHRKDETKVEEIRAMLVDLPGYGYAEVSGSAKHHWQALLGDYVQRREQLAALVL 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R +D + + +LTK DKL+ + L L+ +Y + Sbjct: 129 IVDSRRPFTDLDIQMLEWFAPTGKPIHCILTKSDKLNRNESTNALRTANTLLASYVDEYG 188 Query: 187 EVIP-----TSSVKRKGIEVLRKAILETIN 211 + P S++KR GI+ ILE + Sbjct: 189 QPFPFTAQLFSALKRTGIDEANDKILELLG 218 >gi|311031430|ref|ZP_07709520.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus sp. m3-13] Length = 194 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P PE A +GRSNVGKSS IN ++NRKNLARTS+ PG+TQ LNF++ Sbjct: 9 VISAVKPEQYPSEFLPEFALAGRSNVGKSSFINKMINRKNLARTSSKPGKTQTLNFYLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYG+A+ PK D+WG ++ YL+ R LR V ++D RH Sbjct: 69 EM---------LHFVDVPGYGFAKVPKSERDAWGRMMETYLTNREQLRAVLQIVDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ +L + ++ TK DK+ Q+ L+ K + E+I SS Sbjct: 120 SKDDVTMYEYLKHYELPVVVIATKADKIPKGKWQKHLKVIKETLGM--DKEDELILFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 +G + + + + + Sbjct: 178 TGQGKDEVWGMLQKRM 193 >gi|146305196|ref|YP_001185661.1| GTPase EngB [Pseudomonas mendocina ymp] gi|166225970|sp|A4XNL3|ENGB_PSEMY RecName: Full=Probable GTP-binding protein EngB gi|145573397|gb|ABP82929.1| cell division checkpoint GTPase YihA [Pseudomonas mendocina ymp] Length = 216 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 99/198 (50%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P+ E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 16 FLISAAKVDQCPEDSGLEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFRL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ P W + YL R +L + L++D RH Sbjct: 75 DDER---------RLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRESLCGLVLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + D+ + + + I+LTK DKL+ A+ L K + IR + S+ Sbjct: 126 LTEFDRMMLDWSVASGMPLHILLTKADKLAFGAAKNALLKVRQEIRKQWGEGISIQLFSA 185 Query: 194 VKRKGIEVLRKAILETIN 211 KR G+E + + ++ Sbjct: 186 PKRMGVEEAQMVLAGWLD 203 >gi|157273342|gb|ABV27241.1| GTP-binding protein [Candidatus Chloracidobacterium thermophilum] Length = 201 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 104/196 (53%), Gaps = 15/196 (7%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A FL+ P PE+AF GRSNVGKSSLIN L+ + LARTSN PGRTQ +NF Sbjct: 5 AATFLKSATVAADYPPPTLPEVAFLGRSNVGKSSLINSLLGVRGLARTSNTPGRTQLINF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + VD+PGYGYAR P+K + W +I YL RS L L++D Sbjct: 65 FEIN---------RELRFVDLPGYGYARVPQKIRERWRPMIESYLYHRSALALCVLIVDV 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + +D+ ++ +L + + +V TK DKLS + L + P+V+P Sbjct: 116 RLAPQPLDRTMYEWLVATSRPFCLVATKADKLSRSQLLSQLSVLRA------AYGPDVLP 169 Query: 191 TSSVKRKGIEVLRKAI 206 SS+ R G + + +AI Sbjct: 170 YSSLTRAGADQVWEAI 185 >gi|197120176|ref|YP_002140603.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter bemidjiensis Bem] gi|238690880|sp|B5EEM1|ENGB_GEOBB RecName: Full=Probable GTP-binding protein EngB gi|197089536|gb|ACH40807.1| GTPase EngB [Geobacter bemidjiensis Bem] Length = 214 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 107/197 (54%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P+ PEIAF+GRSNVGKSSL+N+LVNRKNL RTS+ PGRTQ +NFF Sbjct: 8 FIKSATKPAHYPEGNLPEIAFAGRSNVGKSSLVNVLVNRKNLVRTSSTPGRTQLINFFQV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ P W ++ YLS+R LR V L++D R Sbjct: 68 ND---------DFMLVDLPGYGYAKVPLAVKKEWRPMMETYLSKRRNLRGVVLILDIRRT 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + ++L +V +V+TK DK+S ++ ++ E+ S+ Sbjct: 119 PTEEDLQMLAWLRAFSVPPIVVITKCDKVSKNERAR---QSAVIMEKMQLKKEELNYFSA 175 Query: 194 VKRKGIEVLRKAILETI 210 + ++G + + I + Sbjct: 176 LSKEGKDAVWARIDALL 192 >gi|16800661|ref|NP_470929.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua Clip11262] gi|24418385|sp|Q92BF6|ENGB_LISIN RecName: Full=Probable GTP-binding protein EngB gi|16414080|emb|CAC96824.1| lin1593 [Listeria innocua Clip11262] gi|313618752|gb|EFR90657.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua FSL S4-378] Length = 194 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ + Sbjct: 9 VISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH Sbjct: 69 E---------ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ ++ FL + +V TK DK+ + Q+ + + + P + + SS Sbjct: 120 TEDDRMMYEFLKYYDIPVIVVATKADKIPRSKWQKNAKIVRETLDFDP--DDKFVLFSSE 177 Query: 195 KRKGIEVLRKAILE 208 + G + + I E Sbjct: 178 TKMGKDEAWQFIKE 191 >gi|149278824|ref|ZP_01884959.1| GTPase EngB [Pedobacter sp. BAL39] gi|149230443|gb|EDM35827.1| GTPase EngB [Pedobacter sp. BAL39] Length = 209 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ ++ LP A PE AF GRSNVGKSSLIN+LVN+ LA+TS PG+TQ +N Sbjct: 4 KSATFICSNTKVSALPVANMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + +VD+PGYGYA+ K + + W I Y+++R +L+CV++LID Sbjct: 64 HFLINE---------KWYIVDLPGYGYAKVSKNSREKWEKFIRNYITKRESLQCVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R ++ID + ++ + + + ++ TK DK S + + K + + P Sbjct: 115 SRLEPQKIDLEFCCWMGEIQIPFALIFTKADKQSKVKTDQNVAAFKKALGGWFEEIPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TS+ K G + + K I + Sbjct: 175 VTSAEKALGRDEVLKFISD 193 >gi|313623624|gb|EFR93787.1| ribosome biogenesis GTP-binding protein YsxC [Listeria innocua FSL J1-023] Length = 194 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ + Sbjct: 9 VISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH Sbjct: 69 E---------ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ ++ FL + +V TK DK+ + Q+ + + + P + + SS Sbjct: 120 TEDDRMMYEFLKYYEIPVIVVATKADKIPRSKWQKNAKIVRETLDFDP--DDKFVLFSSE 177 Query: 195 KRKGIEVLRKAILE 208 + G + + I E Sbjct: 178 TKMGKDEAWQFIKE 191 >gi|305664545|ref|YP_003860832.1| putative GTP-binding protein [Maribacter sp. HTCC2170] gi|88708562|gb|EAR00798.1| putative GTP-binding protein [Maribacter sp. HTCC2170] Length = 203 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 73/199 (36%), Positives = 103/199 (51%), Gaps = 11/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P PE AF GRSNVGKSSLIN+L RK+LA+TS PG+TQ +N F Sbjct: 8 FVMSNSDVAKCPNEPLPEYAFIGRSNVGKSSLINMLTERKSLAKTSGRPGKTQLINHFKI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYAR KK+ ++ I Y +R L ++L+D RH Sbjct: 68 N---------GNWFLVDLPGYGYARVSKKDKRTFQKYITDYFIKRKQLVSAFVLVDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 +++D + +L + + + I+ TK DKL P + + K L+ P TS Sbjct: 119 PQKVDMEFMEYLGENMIPFSIIFTKADKLKPKQMEANVNSYVKELLNGVWEEAPNYFVTS 178 Query: 193 SVKRKGIEVLRKAILETIN 211 S K G + L I E+IN Sbjct: 179 SSKNMGRDELLHYI-ESIN 196 >gi|187925584|ref|YP_001897226.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia phytofirmans PsJN] gi|238689618|sp|B2T719|ENGB_BURPP RecName: Full=Probable GTP-binding protein EngB gi|187716778|gb|ACD18002.1| GTP-binding protein HSR1-related [Burkholderia phytofirmans PsJN] Length = 217 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 102/208 (49%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEI F+GRSN GKS+ INIL N+K LA S PGRTQ Sbjct: 3 FLLHQSRFFTTVNHLRDLPATSQPEICFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F K + P LVD+PGYGYA P W L+ YL RS LR + L Sbjct: 63 HINYFSVG-----KADEPTAHLVDLPGYGYAEVPGAAKAHWEALLSTYLQTRSQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y TA Sbjct: 118 MMDSRRPLTDLDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVNALRATQKGLAEYRTAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + S++KR GI+ + I + Sbjct: 178 QGELTAQLFSALKRVGIDEAHELIESWL 205 >gi|149181759|ref|ZP_01860250.1| GTP-binding protein [Bacillus sp. SG-1] gi|148850500|gb|EDL64659.1| GTP-binding protein [Bacillus sp. SG-1] Length = 196 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P PE A +GRSNVGKSS IN ++ RK++AR S+ PG+TQ LNF+ + Sbjct: 12 VISAVRPEQYPGEFLPEFALAGRSNVGKSSFINRMIGRKSMARISSRPGKTQTLNFYKIE 71 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ VD+PGYG+A+ KK ++WG +I Y++ R L+ V ++D RH Sbjct: 72 E---------SLYFVDVPGYGFAKVSKKEREAWGRMIETYITMREQLKAVIQIVDLRHPP 122 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL + I+ TK DK+ Q+ L+ TK + E+I SS Sbjct: 123 TEDDIMMYDFLKHNGIPCVIIATKADKIPKGKWQKHLKVTKEALDI--EEGDEIILFSSE 180 Query: 195 KRKGIEVLRKAI 206 G + + A+ Sbjct: 181 TGLGKDQVWAAL 192 >gi|317497643|ref|ZP_07955959.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae bacterium 5_1_63FAA] gi|291559839|emb|CBL38639.1| ribosome biogenesis GTP-binding protein YsxC/EngB [butyrate-producing bacterium SSC/2] gi|316895074|gb|EFV17240.1| ribosome biogenesis GTP-binding protein YsxC [Lachnospiraceae bacterium 5_1_63FAA] Length = 200 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PE+AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +N++ + Sbjct: 16 SKLPDNTLPEVAFAGKSNVGKSSLINALMNRKSYARISAQPGKTQTINYYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYG+A+ + + WG +I YL L+ V+LLID RH + D + Sbjct: 70 ---ELYYVDLPGYGFAKVTQSVKEKWGHMIENYLQTSKQLKMVFLLIDIRHKPSKNDVMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DKL + + L++ + ++ + P S++ ++G + Sbjct: 127 YDWILHNGYRPVIIATKLDKLKRSQVPKHLKEIRTELQM--DKETPIFPFSALSKQGRDE 184 Query: 202 LRKAILETI 210 + I + Sbjct: 185 IWDFIESMV 193 >gi|213158842|ref|YP_002320840.1| GTP-binding [Acinetobacter baumannii AB0057] gi|213058002|gb|ACJ42904.1| GTP-binding [Acinetobacter baumannii AB0057] Length = 224 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 12 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSL 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 72 GN--------PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L + K ++ + SS Sbjct: 124 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSS 182 Query: 194 VKRKGIEVLRKAILETINY 212 + + G+E L + +++ Sbjct: 183 LNKLGLEELASVMAGRLHF 201 >gi|217969951|ref|YP_002355185.1| ribosome biogenesis GTP-binding protein YsxC [Thauera sp. MZ1T] gi|217507278|gb|ACK54289.1| GTP-binding protein HSR1-related [Thauera sp. MZ1T] Length = 219 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 102/202 (50%), Gaps = 12/202 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F + F + + LP EIAF+GRSN GKSS IN L LA S PGR Sbjct: 2 PLFRNA--TFEISIAKPSGLPPPSGAEIAFAGRSNAGKSSAINTLAGHVRLAYVSKTPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +NFF + + LVD+PGYGYA P+K W GLI YL R +L + Sbjct: 60 TQLINFFRLNNGA---------LLVDLPGYGYAAVPEKIRRQWSGLIETYLRTRESLIGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D RH + +D+++ + ++LTK DKLS A TL++ + + Sbjct: 111 VLIMDSRHPLTPLDRNMIDWFAPSGRPMHVLLTKSDKLSRGAAAATLQEVRRALEPL-GP 169 Query: 185 HPEVIPTSSVKRKGIEVLRKAI 206 V SS+K+ G+E + + I Sbjct: 170 QVTVQLFSSLKKSGVEEVERVI 191 >gi|46907788|ref|YP_014177.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes serotype 4b str. F2365] gi|47093095|ref|ZP_00230872.1| GTP-binding protein [Listeria monocytogenes str. 4b H7858] gi|47096723|ref|ZP_00234308.1| GTP-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|217964295|ref|YP_002349973.1| YsxC [Listeria monocytogenes HCC23] gi|226224159|ref|YP_002758266.1| hypothetical GTP binding protein [Listeria monocytogenes Clip81459] gi|254824383|ref|ZP_05229384.1| GTPase EngB [Listeria monocytogenes FSL J1-194] gi|254898275|ref|ZP_05258199.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes J0161] gi|254912232|ref|ZP_05262244.1| GTPase EngB [Listeria monocytogenes J2818] gi|254931498|ref|ZP_05264857.1| GTPase EngB [Listeria monocytogenes HPB2262] gi|254936560|ref|ZP_05268257.1| GTPase EngB [Listeria monocytogenes F6900] gi|254993455|ref|ZP_05275645.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes FSL J2-064] gi|255520161|ref|ZP_05387398.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes FSL J1-175] gi|290893959|ref|ZP_06556935.1| GTPase EngB [Listeria monocytogenes FSL J2-071] gi|300764776|ref|ZP_07074766.1| GTP-binding protein [Listeria monocytogenes FSL N1-017] gi|67460317|sp|Q71ZB0|ENGB_LISMF RecName: Full=Probable GTP-binding protein EngB gi|254783204|sp|B8DHJ0|ENGB_LISMH RecName: Full=Probable GTP-binding protein EngB gi|259645902|sp|C1KVK5|ENGB_LISMC RecName: Full=Probable GTP-binding protein EngB gi|46881057|gb|AAT04354.1| GTP-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|47014907|gb|EAL05855.1| GTP-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|47018535|gb|EAL09291.1| GTP-binding protein [Listeria monocytogenes str. 4b H7858] gi|217333565|gb|ACK39359.1| YsxC [Listeria monocytogenes HCC23] gi|225876621|emb|CAS05330.1| Putative hypothetical GTP binding protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258609154|gb|EEW21762.1| GTPase EngB [Listeria monocytogenes F6900] gi|290556497|gb|EFD90035.1| GTPase EngB [Listeria monocytogenes FSL J2-071] gi|293583050|gb|EFF95082.1| GTPase EngB [Listeria monocytogenes HPB2262] gi|293590207|gb|EFF98541.1| GTPase EngB [Listeria monocytogenes J2818] gi|293593618|gb|EFG01379.1| GTPase EngB [Listeria monocytogenes FSL J1-194] gi|300514452|gb|EFK41509.1| GTP-binding protein [Listeria monocytogenes FSL N1-017] gi|307571139|emb|CAR84318.1| GTPase/GTP-binding protein [Listeria monocytogenes L99] gi|328465593|gb|EGF36822.1| GTP-binding protein YsxC [Listeria monocytogenes 1816] gi|332312000|gb|EGJ25095.1| Putative GTP-binding protein engB [Listeria monocytogenes str. Scott A] Length = 194 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ + Sbjct: 9 IISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH Sbjct: 69 E---------ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ ++ FL + +V TK DK+ + Q+ + + + P + + SS Sbjct: 120 TEDDRMMYEFLKYYDIPVIVVATKADKIPRSKWQKNAKIVRETLDFDP--DDKFVLFSSE 177 Query: 195 KRKGIEVLRKAILE 208 + G + + I E Sbjct: 178 TKMGKDEAWQFIKE 191 >gi|332289351|ref|YP_004420203.1| ribosome biogenesis GTP-binding protein YsxC [Gallibacterium anatis UMN179] gi|330432247|gb|AEC17306.1| ribosome biogenesis GTP-binding protein YsxC [Gallibacterium anatis UMN179] Length = 204 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ I LP E+AF+GRSN GKS+ +N L N+KNLA+TS PGRTQ +N Sbjct: 9 HKTHFVMSAANIRQLPADAGVEVAFAGRSNAGKSTALNTLANQKNLAKTSKTPGRTQLIN 68 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + + +D+PGYGYA P+K W + YL +R L V +L+D Sbjct: 69 LFEVSENCKI---------IDLPGYGYAAVPEKVKLQWQKSLGEYLQQRQCLGGVVILMD 119 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + ++LTK DK+S + + + + I + +V Sbjct: 120 IRHPLKDLDQQMIEWAVSADLPILLLLTKADKVSQSERSKQVRMVREAILPFQ-GDIQVE 178 Query: 190 PTSSVKRKGIEVLRKAILET 209 SS R G++ L + + E Sbjct: 179 VFSSQSRLGVDKLAQKLDEW 198 >gi|164686710|ref|ZP_02210738.1| hypothetical protein CLOBAR_00305 [Clostridium bartlettii DSM 16795] gi|164604100|gb|EDQ97565.1| hypothetical protein CLOBAR_00305 [Clostridium bartlettii DSM 16795] Length = 207 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + P G PEIA GRSNVGKSS +N L+NR+N ARTS PG+T+ +NF++ + Sbjct: 14 MSATKRHQYPAEGLPEIALVGRSNVGKSSCVNALLNRRNFARTSQTPGKTRTINFYLINN 73 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 VD+PGYGYA+ K D WG ++ YL +R L ++LL+D RH Sbjct: 74 ---------EFYFVDLPGYGYAKVAKSEKDKWGNIMETYLGDREELCAIFLLVDIRHEPT 124 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D ++ ++ ++ TK DK+S Q+ + + ++ ++IP SS K Sbjct: 125 NDDVMMYEWIKHFGYECVVIATKADKISRGQYQKHMSIIRKKLQ--LEKDEKIIPLSSSK 182 Query: 196 RKGIEVLRKAILETIN 211 + G+E + ++ N Sbjct: 183 KTGVEDVWNEMVSQYN 198 >gi|327482756|gb|AEA86066.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas stutzeri DSM 4166] Length = 216 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L NLARTS PGRTQ LNFF Sbjct: 16 FMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLT-HANLARTSKTPGRTQLLNFFRL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ P W + YL R +L V+L++D RH Sbjct: 75 DDER---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLVGVFLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + D+ + + + + I+LTK DKL+ A+ L + IR A V S+ Sbjct: 126 LTEFDRMMLDWANASDMPLHILLTKSDKLAFGAAKNALLAIQRDIRKGWGADVSVQLFSA 185 Query: 194 VKRKGIEVLRKAILETIN 211 KR+G+E + + + Sbjct: 186 PKRQGVEEAQLVLASWLG 203 >gi|146284373|ref|YP_001174526.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas stutzeri A1501] gi|145572578|gb|ABP81684.1| GTP-binding protein EngB [Pseudomonas stutzeri A1501] Length = 227 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P E+AF+GRSN GKSS +N L NLARTS PGRTQ LNFF Sbjct: 27 FMISAAKVDQCPADEGLEVAFAGRSNAGKSSALNTLT-HANLARTSKTPGRTQLLNFFRL 85 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ P W + YL R +L V+L++D RH Sbjct: 86 DDER---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLVGVFLMMDIRHP 136 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + D+ + + + + I+LTK DKL+ A+ L + IR A V S+ Sbjct: 137 LTEFDRMMLDWANASDMPLHILLTKSDKLAFGAAKNALLAIQRDIRKGWGADVSVQLFSA 196 Query: 194 VKRKGIEVLRKAILETIN 211 KR+G+E + + + Sbjct: 197 PKRQGVEEAQLVLASWLG 214 >gi|299822780|ref|ZP_07054666.1| ribosome biogenesis GTP-binding protein YsxC [Listeria grayi DSM 20601] gi|299816309|gb|EFI83547.1| ribosome biogenesis GTP-binding protein YsxC [Listeria grayi DSM 20601] Length = 195 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 11/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ G PE A +GRSNVGKSS IN ++ RK++AR S+ PG+TQ LNF+ + Sbjct: 9 VISAVWQEQYPEGGLPEFALAGRSNVGKSSFINTMIGRKSMARISSKPGKTQTLNFYNIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYG+A+ KK + WG +I Y++ R LR V +ID RH Sbjct: 69 D---------TLFFVDVPGYGFAKVSKKEREKWGEMIETYITSREPLRAVVQIIDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL + I+ TK DK+ + + + K + A+ +++ SS Sbjct: 120 TKDDVMMYEFLKYYDIPVIIIATKADKIPRSKWYKNAKVVKETLD--FDANDKLVLFSSE 177 Query: 195 KRKGIEVLRKAILETIN 211 + G E + I +N Sbjct: 178 TKMGKEEAWQHIESFLN 194 >gi|256847018|ref|ZP_05552464.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus coleohominis 101-4-CHN] gi|256715682|gb|EEU30657.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus coleohominis 101-4-CHN] Length = 196 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P PEIA GRSNVGKSSL N L+NRKN A TS+ PG+TQ LNF+ +D Sbjct: 10 ISAVHPDQYPSTDYPEIALVGRSNVGKSSLTNALINRKNFAHTSSQPGKTQTLNFYNVED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ KK + +G +I YL++RS LR V +L+D RH Sbjct: 70 ---------KLYFVDVPGYGYAKVSKKQREEFGQMIENYLTQRSQLRGVIMLVDGRHAPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D ++ +L + +V TKIDK+ P+ + K + ++ S++ Sbjct: 121 ADDVQMYQWLAYYELPILVVATKIDKVKPSQFTRVQKLVKDKLE--FQEKQPLVLFSAMS 178 Query: 196 RKGIEVLRKAILE 208 ++G E + + I E Sbjct: 179 KRGKEDVWRWIEE 191 >gi|302346369|ref|YP_003814667.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella melaninogenica ATCC 25845] gi|302150963|gb|ADK97224.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella melaninogenica ATCC 25845] Length = 198 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + P+ E AF GRSNVGKSSLIN+L N K LA+TS+ PG+T +N F+ Sbjct: 8 FTISSPSLSKCPEDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA++ K + +I +Y+ +R L V++LID RH Sbjct: 68 NN---------EWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + V + I+ TK DKLSP A+ +++ P TS+ Sbjct: 119 QQKIDREFVDWLGESNVPFSIIFTKADKLSPAKAKSNALLWMKKLQDRWEELPPYFITSA 178 Query: 194 VKRKGIEVLRKAILE 208 + G E + I E Sbjct: 179 ENKTGREEVLNYIDE 193 >gi|288802585|ref|ZP_06408024.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella melaninogenica D18] gi|288335113|gb|EFC73549.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella melaninogenica D18] Length = 198 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + P+ E AF GRSNVGKSSLIN+L N K LA+TS+ PG+T +N F+ Sbjct: 8 FTISSPSLSKCPEDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSSKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA++ K + +I +Y+ +R L V++LID RH Sbjct: 68 NN---------DWYLVDLPGYGYAKSSKTVRNKLEQMIAQYILQRKQLVNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L + V + I+ TK DKLSP A+ +++ P TS+ Sbjct: 119 QQKIDREFVDWLGESNVPFSIIFTKADKLSPAKAKSNALLWMKKLQDRWEELPPYFITSA 178 Query: 194 VKRKGIEVLRKAILE 208 + G E + I E Sbjct: 179 ENKTGREEVLNYIDE 193 >gi|116872987|ref|YP_849768.1| GTPase EngB [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458496|sp|A0AJ07|ENGB_LISW6 RecName: Full=Probable GTP-binding protein EngB gi|116741865|emb|CAK20989.1| GTP-binding protein, putative [Listeria welshimeri serovar 6b str. SLCC5334] Length = 194 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ + Sbjct: 9 IISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH Sbjct: 69 E---------ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ ++ FL + +V TK DK+ + Q+ + + + P + + SS Sbjct: 120 TEDDRMMYEFLKYYEIPVIVVATKADKIPRSKWQKNAKIVRETLDFDP--DDKFVLFSSE 177 Query: 195 KRKGIEVLRKAILE 208 + G + + I E Sbjct: 178 TKMGKDEAWQFIKE 191 >gi|323339571|ref|ZP_08079845.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus ruminis ATCC 25644] gi|323092966|gb|EFZ35564.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus ruminis ATCC 25644] Length = 202 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 103/193 (53%), Gaps = 11/193 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P G PEIA SGRSNVGKSSLIN L+NRK LARTS+ PG+TQ LNF+ Sbjct: 14 ISAVSPAQYPNEGFPEIALSGRSNVGKSSLINTLINRKGLARTSSQPGKTQTLNFY---- 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 N + VD+PGYGYA+ KK+ + WG +I RY S+R LR V L+D RH Sbjct: 70 -----NIESELYFVDVPGYGYAKVSKKDREKWGQMIERYFSDRPVLRGVISLVDGRHEPT 124 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 ++D + FL + + TK+DK+ T + + + P E++ SSV Sbjct: 125 ELDCQMIDFLHYYDLPILVCATKMDKIPRGKWNRTESQIRKKLALNP--QDEIVLFSSVT 182 Query: 196 RKGIEVLRKAILE 208 + G E + + + Sbjct: 183 KAGKEEVWNWVEK 195 >gi|262377319|ref|ZP_06070543.1| GTPase EngB [Acinetobacter lwoffii SH145] gi|262307772|gb|EEY88911.1| GTPase EngB [Acinetobacter lwoffii SH145] Length = 315 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 9/202 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NF Sbjct: 44 KAEFLMSAPKLSLCVEDTGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINF 103 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + P LVD+PGYGYA P+K W + YL R +L+ + LL+D Sbjct: 104 FSLGN--------PDQRLVDLPGYGYAAVPEKMKLVWQKELENYLIHRQSLQGLVLLMDI 155 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH ++ D + + + + ++LTK DKL+ A + L++ K ++ + Sbjct: 156 RHPLQHFDVMMLEWAYSRQLFVHVLLTKSDKLNRGPASKALQEVKAALKKMKLDF-SIQL 214 Query: 191 TSSVKRKGIEVLRKAILETINY 212 SS+ ++G+E L + +N+ Sbjct: 215 FSSMNKQGLEELASVMGGRLNF 236 >gi|50118987|ref|YP_048154.1| ribosome biogenesis GTP-binding protein YsxC [Pectobacterium atrosepticum SCRI1043] gi|81646696|sp|Q6DB76|ENGB_ERWCT RecName: Full=Probable GTP-binding protein EngB gi|49609513|emb|CAG72946.1| probable GTP-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 211 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 10/203 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ P+I L E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ Sbjct: 5 YNYHMTRFIISAPDIRHLETDNGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQ 64 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F + + LVD+PGYGYA P++ W + YL +R++L+ + + Sbjct: 65 LINLFQVAE---------GVRLVDLPGYGYAEVPEQMKIKWQRALGEYLQKRNSLKGLVV 115 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K +DQ + + + ++LTK DKL+ + L + + + Sbjct: 116 LMDIRHPLKDLDQQMILWAVDVKLPVLVLLTKADKLASGARKAQLNMVREAVLPF-MGDI 174 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 +V SS+K+ G++ L++ + Sbjct: 175 QVEAFSSLKKIGVDKLQQKLDNW 197 >gi|161830201|ref|YP_001597597.1| ribosome biogenesis GTP-binding protein YsxC [Coxiella burnetii RSA 331] gi|189037176|sp|A9NAD8|ENGB_COXBR RecName: Full=Probable GTP-binding protein EngB gi|161762068|gb|ABX77710.1| GTP-binding protein [Coxiella burnetii RSA 331] Length = 205 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 104/200 (52%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +L E LP EIAF GRSN GKSS +NI+ K LARTS PGRTQ +N Sbjct: 11 QEAKYLTSAAEFDQLPPDQGAEIAFIGRSNAGKSSALNIITGIKGLARTSKTPGRTQMIN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + LVD+PGYGYA+ P+ W L+ YL R L+ + +++D Sbjct: 71 FFALNEHE---------RLVDLPGYGYAKVPRMVQKRWEELVDSYLKNRRCLKGLVVVMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K++D+DV + + I+LTK DKLS A++TL + + I Y + Sbjct: 122 IRHPLKEMDEDVIEWAVNYDIPIHILLTKSDKLSQNAAKKTLGEVQTAISAYGEKL-TLQ 180 Query: 190 PTSSVKRKGIEVLRKAILET 209 SS R G++ ++ + + Sbjct: 181 LFSSHDRTGLDEVKAVLSQW 200 >gi|303237178|ref|ZP_07323748.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella disiens FB035-09AN] gi|302482565|gb|EFL45590.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella disiens FB035-09AN] Length = 225 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 97/193 (50%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P I P E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FSISSPTIAKCPNDTKNEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +VD+PGYGYA+ K + +I +YL +R L V++LID RH Sbjct: 68 N---------KEWYIVDLPGYGYAKNSKTVRNKLEQMIAQYLLQRKQLVNVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID++ +L K + + IV TK DKLS A+ + + P TSS Sbjct: 119 QQKIDREFIDWLGKSNIPFSIVFTKADKLSVGKAKANAAAWMKKLEDTWEEIPPYFVTSS 178 Query: 194 VKRKGIEVLRKAI 206 + G E + I Sbjct: 179 ESKLGREEVLDYI 191 >gi|295092437|emb|CBK78544.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Clostridium cf. saccharolyticum K10] Length = 205 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PE AF+G+SNVGKSSLIN L+NRK+ ARTS PG+TQ +NF+ D Sbjct: 16 SRLPANTQPEFAFAGKSNVGKSSLINALMNRKSYARTSAQPGKTQTINFYHIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 A+ VD+PGYGYARA ++ WG +I YL + L+CV+LLID RH + D+ + Sbjct: 70 ---ALYYVDLPGYGYARANEEVKAKWGKMIENYLHKSPMLKCVFLLIDIRHEPSENDRLM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 +S++ + I+ TK+DKL + + ++ + + P +IP S+ ++G E Sbjct: 127 YSWIQNQGYRPVIIATKLDKLKRSQVAKHVKMVRTGLGMEPEDL--LIPFSAETKQGREK 184 Query: 202 LRKAILET 209 + I +T Sbjct: 185 IWDFIEKT 192 >gi|37524399|ref|NP_927743.1| GTPase EngB [Photorhabdus luminescens subsp. laumondii TTO1] gi|81572743|sp|Q7N9E9|ENGB_PHOLL RecName: Full=Probable GTP-binding protein EngB gi|36783823|emb|CAE12685.1| Probable GTP-binding protein engB [Photorhabdus luminescens subsp. laumondii TTO1] Length = 210 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP+ E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 13 FITSAPDIRHLPQDMGIEVAFAGRSNAGKSSALNALTKQKSLARTSKTPGRTQLINLFEV 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + LVD+PGYGYA P++ W + YL +R L + +L+D RH Sbjct: 73 EE---------GIRLVDLPGYGYAEVPEEMKRKWQKALGEYLQKRECLIGLVVLMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +DQ + + V ++LTK DKL+ + L K + + +V S Sbjct: 124 LKDLDQQMIQWAVAMQVPVMVLLTKADKLASGARKSQLNKVRDALLAL-NGDIQVEYFSV 182 Query: 194 VKRKGIEVLRKAI 206 K+ GI+ L + + Sbjct: 183 PKKIGIDKLHQKL 195 >gi|227355156|ref|ZP_03839567.1| GTP-binding protein [Proteus mirabilis ATCC 29906] gi|227164943|gb|EEI49790.1| GTP-binding protein [Proteus mirabilis ATCC 29906] Length = 200 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 98/193 (50%), Gaps = 10/193 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 T F F+ P+I LP EIAF+GRSN GKSS +N L + LARTS PGR Sbjct: 16 TQFNYQKAHFIISAPDIRHLPPDTGIEIAFAGRSNAGKSSALNALTQQNGLARTSKTPGR 75 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F ++ LVD+PGYGYA+ P++ W + YL +R L+ V Sbjct: 76 TQLINLFQIEEGR---------RLVDLPGYGYAQVPEEMKRKWQRSLGEYLQKRECLKGV 126 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +L+D RH +K +D + + + ++LTK DKL+ ++ L + + + Sbjct: 127 VILMDIRHPLKDLDMQMIDWAVDSELPTLVLLTKADKLASGARKKQLMAVQNALSE-KSG 185 Query: 185 HPEVIPTSSVKRK 197 V SS+K+ Sbjct: 186 DIRVECFSSLKKI 198 >gi|312868996|ref|ZP_07729173.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus oris PB013-T2-3] gi|311095422|gb|EFQ53689.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus oris PB013-T2-3] Length = 196 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 PK PE+A GRSNVGKSSL N+L+NR+N A TS+ PG+TQ LNF+ +D Sbjct: 10 ISAVRPDQYPKTNYPEVALVGRSNVGKSSLTNVLINRRNFAHTSSQPGKTQTLNFYAVED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ KK + +G +I +YL++R LR LL+D RH Sbjct: 70 ---------QLYFVDVPGYGYAKVSKKERERFGQMIEQYLTQRDQLRGAILLVDGRHAPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D ++ +L + +V TKIDK+ T K + A +++ S+V Sbjct: 121 ADDVSMYQWLQYYHIPTLVVATKIDKVKGNTWNRQESLIKKTLG--LAAGDQLVLFSAVN 178 Query: 196 RKGIEVLRKAILE 208 + G + + + I E Sbjct: 179 KTGKDAVWQWIDE 191 >gi|327439427|dbj|BAK15792.1| predicted GTPase [Solibacillus silvestris StLB046] Length = 193 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 11/193 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ G PE A +GRSNVGKSS IN ++ RK +AR S+ PG+TQ LNF+ + Sbjct: 9 IGSFVRPEQFPEDGLPEFALAGRSNVGKSSFINRMIGRKAMARISSKPGKTQQLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K +WG +I +Y R LR V L++D RH Sbjct: 69 E---------QLYYVDVPGYGYAKVSKSERAAWGRMIEQYFMGREQLRAVVLIVDIRHNP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + +V TK DK+ + + + ++ +I SS Sbjct: 120 TSDDCMMYDFLKHYNIPVIVVATKADKIPKGKWDKHKKIVRETLQM--EKQDPLIVFSSE 177 Query: 195 KRKGIEVLRKAIL 207 K G+E I Sbjct: 178 KGLGLEQAWAEIE 190 >gi|237747394|ref|ZP_04577874.1| GTP-binding protein EngB [Oxalobacter formigenes HOxBLS] gi|229378745|gb|EEO28836.1| GTP-binding protein EngB [Oxalobacter formigenes HOxBLS] Length = 237 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 102/208 (49%), Gaps = 12/208 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F R + LP+ PEIAF GRSN GKSS IN L N+KNLA S PGRTQH+NFF Sbjct: 20 FFRTANHLRDLPRLNVPEIAFVGRSNAGKSSAINTLCNQKNLAYASRTPGRTQHINFFSI 79 Query: 74 KD-------FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 + N + LVD+PGYGYA+ + W L+ YL R L + L Sbjct: 80 GGAHVAQHRHDPVDENKVELFLVDLPGYGYAQISGTAKEHWQKLLSDYLITRPQLSGLIL 139 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D RH + +D + + +LTK DKL+ + E L++ ++R+Y + Sbjct: 140 VMDSRHPFQPLDVSLLEWFAVTGKPIHCLLTKADKLNRRESSEALKQVDTILRSYIDENG 199 Query: 187 EVIP-----TSSVKRKGIEVLRKAILET 209 P SS KR G++ IL Sbjct: 200 HPFPFSAQLFSSTKRTGLKEATAFILNL 227 >gi|328957598|ref|YP_004374984.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium sp. 17-4] gi|328673922|gb|AEB29968.1| ribosome biogenesis GTP-binding protein YsxC [Carnobacterium sp. 17-4] Length = 195 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P G PEIA +GRSNVGKSS IN ++NRK LARTS PG+TQ LN+++ + Sbjct: 9 VISAVSPAQYPNTGLPEIALAGRSNVGKSSFINTMINRKGLARTSGKPGKTQTLNYYIIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D VD+PGYGYA+ K WG ++ Y ++R TL+ ++D RH Sbjct: 69 D---------TFYFVDVPGYGYAKVSKTERAKWGQMLETYFTQRDTLKAALSVVDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL ++ ++ TK DK+ + + ++ K + E + SS Sbjct: 120 TEDDVQMYEFLKYHSIPVIVIATKADKIPRSKWNKHIKVVKDKLNLREE--DEFVLFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 +G + I I Sbjct: 178 TGEGKDKAWSLIESYI 193 >gi|317051090|ref|YP_004112206.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurispirillum indicum S5] gi|316946174|gb|ADU65650.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurispirillum indicum S5] Length = 204 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 98/200 (49%), Gaps = 13/200 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 +T F+ P + P PEI F GRSNVGKSSLIN + R+N+A TS PGRT+ Sbjct: 5 YTPHQVQFITSAPSLAKCPVPDRPEIVFLGRSNVGKSSLINAVTGRRNIAITSKTPGRTR 64 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F + VD+PGYG+AR P D W + YL R + + Sbjct: 65 LINYFDVN---------GDLYCVDLPGYGFARVPTGMRDEWNRSLYEYLERRENIALAIM 115 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D RH ++ D +FS L + V IV TK DKL+ Q+ + K + Sbjct: 116 IVDARHEAQKNDLRMFSLLQELEVPVFIVATKADKLTKNQLQKQVAGLKKVYGKEAG--- 172 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 V+P SS + GIE + I Sbjct: 173 -VLPFSSTAKYGIEEFWQEI 191 >gi|163791245|ref|ZP_02185661.1| GTP-binding protein [Carnobacterium sp. AT7] gi|159873515|gb|EDP67603.1| GTP-binding protein [Carnobacterium sp. AT7] Length = 195 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P G PEIA +GRSNVGKSS IN ++NRK LARTS PG+TQ LN+++ + Sbjct: 9 VISAVSPAQYPSTGLPEIALAGRSNVGKSSFINTMINRKGLARTSGKPGKTQTLNYYIIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K WG ++ Y ++R TL+ ++D RH Sbjct: 69 D---------SFYFVDVPGYGYAKVSKTERAKWGQMLEVYFTQRETLKVALSVVDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL ++ +V TK DK+ + ++ K + H + SS Sbjct: 120 TEDDVQMYEFLKYHSIPVIVVATKADKIPRGKWNKHIKIVKDKLNIREEDH--FVLFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 +G E I I Sbjct: 178 TGEGKEQAWSLIESYI 193 >gi|296159592|ref|ZP_06842416.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. Ch1-1] gi|295890300|gb|EFG70094.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. Ch1-1] Length = 217 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEI F+GRSN GKS+ INIL N+K LA S PGRTQ Sbjct: 3 FLLHQSRFFTTVNHLRDLPATSQPEICFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F K P LVD+PGYGYA P W L+ YL RS LR + L Sbjct: 63 HINYFSVG-----KAEEPTAHLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 118 MMDSRRPLTDLDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVNALRATQKGLAEYRAAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 S++KR GI+ + I + Sbjct: 178 RGELTAQLFSALKRIGIDEAHELIESWL 205 >gi|255530888|ref|YP_003091260.1| GTP-binding protein HSR1-related [Pedobacter heparinus DSM 2366] gi|255343872|gb|ACU03198.1| GTP-binding protein HSR1-related [Pedobacter heparinus DSM 2366] Length = 201 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 110/199 (55%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ ++ LP A PE AF GRSNVGKSSLIN+LVN+ LA+TS PG+TQ +N Sbjct: 4 KSATFICSNTKVSALPVANMPEYAFIGRSNVGKSSLINMLVNQHGLAKTSQRPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + +VD+PGYGYA+ K + ++W I Y+++R +L+CV++LID Sbjct: 64 HFLINE---------KWYIVDLPGYGYAKVSKTSRENWEKFIRNYITKRESLQCVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R ++ID + ++ + + + ++ TK DK S + + K + + P Sbjct: 115 SRLEPQKIDLEFCCWMGEIQIPFALIFTKADKQSTVKTDKNVALFKKALGGWFEEIPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TS+ K G E + + I + Sbjct: 175 VTSAEKGTGKEKVLEFIEQ 193 >gi|146320685|ref|YP_001200396.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus suis 98HAH33] gi|145691491|gb|ABP91996.1| Predicted GTPase [Streptococcus suis 98HAH33] Length = 206 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 93/196 (47%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P PEIA +GRSNVGKSS IN L+ RKNLARTS PG+TQ LNF+ Sbjct: 22 LLSAVSKAQYPGYDIPEIALAGRSNVGKSSFINTLLGRKNLARTSGKPGKTQQLNFYNID 81 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PG GYA+ K WG +I YL+ R LR + L+D RH Sbjct: 82 D---------KIRFVDVPGNGYAKVSKTERAKWGKMIEEYLTTRENLRVLVSLVDMRHEP 132 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + IV TK DK+ + K + + + + SS Sbjct: 133 SADDVQMYDFLKYYEIPVIIVATKADKIPRGKWNKHESMIKKKLD--FDKNDQFVIFSSE 190 Query: 195 KRKGIEVLRKAILETI 210 R G + AIL I Sbjct: 191 TRHGYDQAWDAILSNI 206 >gi|209521070|ref|ZP_03269801.1| GTP-binding protein HSR1-related [Burkholderia sp. H160] gi|209498489|gb|EDZ98613.1| GTP-binding protein HSR1-related [Burkholderia sp. H160] Length = 220 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHESRFFTTVNHLRDLPANAQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F K + P LVD+PGYGYA P W L+ YL RS LR + L Sbjct: 63 HINYFSVG-----KADEPTAYLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L + + Y A Sbjct: 118 MMDSRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESTNALRTAQKGLAEYRAAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 S++KR G++ + I + Sbjct: 178 RGELTAQLFSALKRTGLDEAHELIESWL 205 >gi|304415126|ref|ZP_07395853.1| GTPase [Candidatus Regiella insecticola LSR1] gi|304283022|gb|EFL91458.1| GTPase [Candidatus Regiella insecticola LSR1] Length = 228 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 108/198 (54%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 34 FISSAPDIHHLPAYEGIEIAFAGRSNAGKSSALNALTHKKGLARTSKTPGRTQLINLFEV 93 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA K+ + W + YL++R L+ + +L+D RH Sbjct: 94 ADGK---------RLVDLPGYGYAAVKKEIKNQWQHALNDYLNKRDCLKGLVVLMDIRHP 144 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ DQ + S + ++LTK DKL+ + A+ L K + + + +V SS Sbjct: 145 LKESDQQMISLAVAVDIPIFLLLTKADKLATSAAKTQLNKVREAVLPF-MGDIQVEKFSS 203 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ G++ LR + N Sbjct: 204 LKKTGVDKLRAKLNNWFN 221 >gi|294501425|ref|YP_003565125.1| hypothetical protein BMQ_4688 [Bacillus megaterium QM B1551] gi|295706773|ref|YP_003599848.1| hypothetical protein BMD_4674 [Bacillus megaterium DSM 319] gi|294351362|gb|ADE71691.1| GTP-binding conserved hypothetical protein [Bacillus megaterium QM B1551] gi|294804432|gb|ADF41498.1| conserved hypothetical protein [Bacillus megaterium DSM 319] Length = 195 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 105/192 (54%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + PK PE A +GRSNVGKSS IN ++NRK+LARTS+ PG+TQ LNFF+ Sbjct: 9 VISAVRPEQYPKENLPEFALAGRSNVGKSSFINKMLNRKSLARTSSKPGKTQTLNFFLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYG+A+ KK ++WG +I YL+ R L+ V +++D RH Sbjct: 69 EI---------LHFVDVPGYGFAKVSKKEREAWGKMIETYLTNREQLKAVLMIVDLRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL + ++ TK DK+ Q+ L+ + + P E+I SS Sbjct: 120 SKDDVMMYEFLKHHDLPVMVIATKADKIPKGKWQKHLKVVRETLDLDPN--DELIHFSSE 177 Query: 195 KRKGIEVLRKAI 206 +G + K++ Sbjct: 178 TGEGKDKAWKSL 189 >gi|170016866|ref|YP_001727785.1| GTPase [Leuconostoc citreum KM20] gi|238688953|sp|B1MXT9|ENGB_LEUCK RecName: Full=Probable GTP-binding protein EngB gi|169803723|gb|ACA82341.1| Predicted GTPase [Leuconostoc citreum KM20] Length = 194 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 10/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P G PEIA GRSNVGKSSL N L+ RKN ARTS+ PG+TQ LNF+ Sbjct: 9 VMSAVSAAQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTLNFY--- 65 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ KK +++G +I Y++ R LR V L+D RH Sbjct: 66 ------DVENQLYFVDVPGYGYAKVSKKQREAFGNMIEEYITSRKQLRGVISLVDARHDP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ +L + +V TK DK+S + + K + + ++ + + SS Sbjct: 120 SEDDVAMYEWLHYYNIPILVVATKSDKISKSKFNKYENNIKKQLG-FDSSASDFLFFSSE 178 Query: 195 KRKGIEVLRKAI 206 + G + + + I Sbjct: 179 TKYGRDSVWEWI 190 >gi|313676939|ref|YP_004054935.1| ribosome biogenesis GTP-binding protein ysxc [Marivirga tractuosa DSM 4126] gi|312943637|gb|ADR22827.1| ribosome biogenesis GTP-binding protein YsxC [Marivirga tractuosa DSM 4126] Length = 203 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 105/195 (53%), Gaps = 9/195 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P+ PE AF GRSNVGKSSLIN+L +RKNLA+TS+ PG+TQ +N F+ Sbjct: 9 FVISNTDYRKSPETDLPEYAFIGRSNVGKSSLINMLTDRKNLAKTSSKPGKTQLINHFLM 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ KK + WG +I YL R L C+++LID R Sbjct: 69 DE---------KWYLVDLPGYGYAKVSKKTNEGWGKMISDYLKNRENLVCIFVLIDSRLP 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + F+ K + ++ TK DK S Q+ + K + N P +S+ Sbjct: 120 PQKADVEFLDFIGKNGLPLSLIFTKADKQSNNKTQQNIAVFKKKMLNTWEEFPPYFVSSA 179 Query: 194 VKRKGIEVLRKAILE 208 K+ G E + I + Sbjct: 180 EKQTGKEEILGIIDQ 194 >gi|90019724|ref|YP_525551.1| ribosome biogenesis GTP-binding protein YsxC [Saccharophagus degradans 2-40] gi|119369251|sp|Q21PP0|ENGB_SACD2 RecName: Full=Probable GTP-binding protein EngB gi|89949324|gb|ABD79339.1| cell division checkpoint GTPase YihA [Saccharophagus degradans 2-40] Length = 213 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 99/199 (49%), Gaps = 8/199 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 FL P I P E+AF+GRSN GKSS IN L LARTS PGRTQ +NFF Sbjct: 10 QFLISAPSIRQCPTEEGTEVAFAGRSNAGKSSAINTLTGNGKLARTSKTPGRTQLINFFN 69 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 P +VD+PGYGYA+ P W + YL +R LR + +++D RH Sbjct: 70 FP-------AAPDQRIVDLPGYGYAKVPMAVKKKWQADLSEYLQQRDALRGLVIVMDIRH 122 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPT 191 ++ D + ++ + + ++LTK DKL P A+ TL + +R+ Sbjct: 123 PLQDFDTMMINWAVEGEMPVHLLLTKADKLKPGAAKSTLLAVQKHMRDAQVDDLVSAQMF 182 Query: 192 SSVKRKGIEVLRKAILETI 210 S++K++GI L + + Sbjct: 183 SALKKQGINQLEDVLNGWL 201 >gi|311745594|ref|ZP_07719379.1| ribosome biogenesis GTP-binding protein YsxC [Algoriphagus sp. PR1] gi|126578156|gb|EAZ82376.1| ribosome biogenesis GTP-binding protein YsxC [Algoriphagus sp. PR1] Length = 203 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 100/198 (50%), Gaps = 9/198 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ G PK EIAF GRSNVGKSSLIN+L + LA+TS PG+TQ +N F+ Sbjct: 6 QFVISNTNPGNCPKPDRAEIAFIGRSNVGKSSLINMLTGKSGLAKTSQKPGKTQLINHFM 65 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYG+A+ K W +I YL++R L V++LID R Sbjct: 66 INE---------KWYLVDLPGYGFAKINVKVKQGWESMISTYLTKRENLCGVFVLIDSRL 116 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++ID + + + V +V TK DK S + ++K + + P+ TS Sbjct: 117 EPQKIDLEFLYWCGTEGVPAVLVFTKADKQSKNKTNQNIQKFLKKMVDIFEEAPQYFVTS 176 Query: 193 SVKRKGIEVLRKAILETI 210 + +G E L I E + Sbjct: 177 AESAQGKEELTSFIEELV 194 >gi|56459139|ref|YP_154420.1| ribosome biogenesis GTP-binding protein YsxC [Idiomarina loihiensis L2TR] gi|81600088|sp|Q5QXJ0|ENGB_IDILO RecName: Full=Probable GTP-binding protein EngB gi|56178149|gb|AAV80871.1| GTPase essential for cell cycle [Idiomarina loihiensis L2TR] Length = 206 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ F+ P+I LP E+AF+GRSN GKSS +N L +K LARTS PGRTQ +N Sbjct: 9 ASAKFVTSAPDISKLPPDSGIEVAFAGRSNAGKSSALNTLTRQKALARTSKTPGRTQLIN 68 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F L+D+PGYG+A+ P + W + YL +R +L+ + +L+D Sbjct: 69 VFELT---------TGQRLIDLPGYGFAKVPLAVKEKWQRSLSEYLQQRDSLKGIVVLMD 119 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ DQ++ + + +LTK DKL + T+ K K + +V Sbjct: 120 IRHPFRETDQELIYWAVDCDLPVLALLTKADKLKQGARKSTVLKAKQAAIAF-NGDVQVE 178 Query: 190 PTSSVKRKGIEVLRKAILET 209 SS+KR G+E + + + + Sbjct: 179 AFSSLKRIGVEQVEEKLNQW 198 >gi|262370585|ref|ZP_06063910.1| GTPase EngB [Acinetobacter johnsonii SH046] gi|262314385|gb|EEY95427.1| GTPase EngB [Acinetobacter johnsonii SH046] Length = 286 Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 9/202 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NF Sbjct: 44 KAEFLMSAPKLNLCVEDTGYEIAFAGRSNAGKSSAINALTNQKQLARASKRPGRTQMINF 103 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + P LVD+PGYGYA P+ W + YL +R +L+ + LL+D Sbjct: 104 FSLGN--------PDQRLVDLPGYGYAAVPEAMKIVWQKELENYLIQRKSLQGLVLLMDI 155 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH ++ D + + + + ++LTK DKL+ A + L++ K ++ + Sbjct: 156 RHPLQHFDVMMLEWAYSRKLFVHVLLTKSDKLNRGPASKALQEVKAQLKKMKLDF-SIQL 214 Query: 191 TSSVKRKGIEVLRKAILETINY 212 SS+ ++G+E L + +N+ Sbjct: 215 FSSLNKQGLEELASVMGGRLNF 236 >gi|167640704|ref|ZP_02398964.1| GTP-binding protein [Bacillus anthracis str. A0193] gi|177654009|ref|ZP_02936050.1| GTP-binding protein [Bacillus anthracis str. A0174] gi|254736573|ref|ZP_05194279.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Western North America USA6153] gi|167511276|gb|EDR86662.1| GTP-binding protein [Bacillus anthracis str. A0193] gi|172081064|gb|EDT66142.1| GTP-binding protein [Bacillus anthracis str. A0174] Length = 198 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 96/192 (50%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ Sbjct: 9 VISAVKPEQYPDGDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + M VD+PGYGYA+ K +WG +I Y + R L L++D RH Sbjct: 69 EM---------MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + I+ TK DK+ Q+ L+ K + + EV+ SS Sbjct: 120 TNDDVMMYDFLKHYDIPTIIIATKADKIPKGKWQKHLKVVKETLDI--ESGDEVVLFSSE 177 Query: 195 KRKGIEVLRKAI 206 G E KAI Sbjct: 178 TGLGKEEAWKAI 189 >gi|53713337|ref|YP_099329.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis YCH46] gi|253565316|ref|ZP_04842771.1| GTPase EngB [Bacteroides sp. 3_2_5] gi|265763411|ref|ZP_06091979.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_16] gi|81382646|sp|Q64UN4|ENGB_BACFR RecName: Full=Probable GTP-binding protein EngB gi|52216202|dbj|BAD48795.1| putative GTP-binding protein [Bacteroides fragilis YCH46] gi|251945595|gb|EES86002.1| GTPase EngB [Bacteroides sp. 3_2_5] gi|263256019|gb|EEZ27365.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_16] gi|301163141|emb|CBW22690.1| putative GTP-binding cell division protein [Bacteroides fragilis 638R] Length = 201 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ Sbjct: 8 FVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYAR +K + +I Y+ ER + +++LID R Sbjct: 68 NN---------SWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L + + + I+ TK DKL + + +R P TSS Sbjct: 119 PQKIDLEFMEWLGENGIPFAIIFTKADKLKGGRLKINISAYLRELRKQWEELPPYFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 +R G + I E+IN Sbjct: 179 EERLGRTEVLNYI-ESIN 195 >gi|160915950|ref|ZP_02078158.1| hypothetical protein EUBDOL_01975 [Eubacterium dolichum DSM 3991] gi|158432426|gb|EDP10715.1| hypothetical protein EUBDOL_01975 [Eubacterium dolichum DSM 3991] Length = 196 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 13/201 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ + P+ P + PEI +GRSNVGKSS IN + NRK LA N+PG+T+ Sbjct: 4 FQKAELV--ISAPDKKSWPDSDLPEIVLAGRSNVGKSSFINAMCNRKKLAYVGNSPGKTR 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNFF D VD+PGYGYA+ K + +G ++ Y SERS + + L Sbjct: 62 LLNFFNLDD---------KYMFVDVPGYGYAKISKAQLIKFGQMMEDYFSERSQKKGLVL 112 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D RH D + F + +V TK+DKL + + L+ + + + Sbjct: 113 IVDARHKPTDDDITMIEFARYYEIPVCVVATKMDKLKSSQRHKQLKLIRQTLE--LSEDE 170 Query: 187 EVIPTSSVKRKGIEVLRKAIL 207 ++ P SS ++GI+ + + ++ Sbjct: 171 KLFPFSSETKQGIDEVWEYLI 191 >gi|153206108|ref|ZP_01945371.1| GTP-binding protein [Coxiella burnetii 'MSU Goat Q177'] gi|212217903|ref|YP_002304690.1| ribosome biogenesis GTP-binding protein YsxC [Coxiella burnetii CbuK_Q154] gi|238058981|sp|B6J4E1|ENGB_COXB1 RecName: Full=Probable GTP-binding protein EngB gi|120577238|gb|EAX33862.1| GTP-binding protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012165|gb|ACJ19545.1| GTP-binding protein [Coxiella burnetii CbuK_Q154] Length = 205 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 105/200 (52%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +L E LP EIAF GRSN GKSS +NI+ K LARTS PGRTQ +N Sbjct: 11 QEAKYLTSAAEFDQLPPDQGAEIAFIGRSNAGKSSALNIITGIKGLARTSKTPGRTQMIN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + LVD+PGYGYA+ P+ W L+ YL +R L+ + +++D Sbjct: 71 FFALNEHE---------RLVDLPGYGYAKVPRMVQKRWEELVDSYLKKRRCLKGLVVVMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K++D+DV + + I+LTK DKLS A++TL + + I Y + Sbjct: 122 IRHPLKEVDEDVIEWAVNYDIPIHILLTKSDKLSQNAAKKTLGEVQTAISAYGEKL-TLQ 180 Query: 190 PTSSVKRKGIEVLRKAILET 209 SS R G++ ++ + + Sbjct: 181 LFSSHDRTGLDEVKAVLSQW 200 >gi|114049482|ref|YP_740032.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella sp. MR-7] gi|119369255|sp|Q0HPI0|ENGB_SHESR RecName: Full=Probable GTP-binding protein EngB gi|113890924|gb|ABI44975.1| cell division checkpoint GTPase YihA [Shewanella sp. MR-7] Length = 219 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 106/213 (49%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 SH F ++ FL P+I L P EIAF+GRSN GKSS +N L +KNLART Sbjct: 4 SHIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKNLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F LVD+PGYG+A+ P W + YL +R Sbjct: 62 SKTPGRTQLINVFELD---------AQRRLVDLPGYGFAQVPLAMKLKWQQSLGEYLQKR 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + + Sbjct: 113 ACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRKAL 172 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + +V P S++K G + + E + Sbjct: 173 VEF-GDWVQVEPFSALKGTGKPKVLSILNEWCH 204 >gi|262280231|ref|ZP_06058015.1| GTPase [Acinetobacter calcoaceticus RUH2202] gi|262258009|gb|EEY76743.1| GTPase [Acinetobacter calcoaceticus RUH2202] Length = 258 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRQSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L + K ++ + SS Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + + G+E L + +++ Sbjct: 217 LNKIGLEELASVMAGRLHF 235 >gi|189423527|ref|YP_001950704.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter lovleyi SZ] gi|238692100|sp|B3E2D1|ENGB_GEOLS RecName: Full=Probable GTP-binding protein EngB gi|189419786|gb|ACD94184.1| small GTP-binding protein [Geobacter lovleyi SZ] Length = 200 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 9/198 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++ + P PEIAF+GRSNVGKSSLIN++V RK L RTS+ PGRTQ +NFF Sbjct: 7 TFIKSAVKPADYPPVDLPEIAFAGRSNVGKSSLINVIVERKALVRTSSTPGRTQLINFFQ 66 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 ++ LVD+PGYGYA+ P WG ++ RYLS R +LR V L++D R Sbjct: 67 VT------GVPFSLNLVDLPGYGYAKVPLDVKRQWGPMMERYLSGRESLRGVVLILDIRR 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + ++L IVLTK DK++ + ++I S Sbjct: 121 IPSEEDLQMLNWLRSYKRRPIIVLTKCDKVTKNERARQTAAIAARLEM---DKSQLIHFS 177 Query: 193 SVKRKGIEVLRKAILETI 210 ++ + G + + +AI + + Sbjct: 178 ALSKDGRDTVWQAIQDAV 195 >gi|325269826|ref|ZP_08136436.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella multiformis DSM 16608] gi|324987799|gb|EGC19772.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella multiformis DSM 16608] Length = 199 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 104/202 (51%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F P I P E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N Sbjct: 4 KKSEFTISSPSIARCPSDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGYA+ K + +I +Y+ +R L V++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID++ +L + + + I+ TK DKLSP+ A+ + + A P Sbjct: 115 IRHEQQKIDREFVDWLGESNIPFSIIFTKADKLSPSKAKSNALLWMKKLEDRWEALPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TS+ + G E + I E IN Sbjct: 175 ITSAETKAGKEEVLDYI-EQIN 195 >gi|113972233|ref|YP_736026.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella sp. MR-4] gi|117922541|ref|YP_871733.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella sp. ANA-3] gi|119369254|sp|Q0HD98|ENGB_SHESM RecName: Full=Probable GTP-binding protein EngB gi|166225983|sp|A0L2Q8|ENGB_SHESA RecName: Full=Probable GTP-binding protein EngB gi|113886917|gb|ABI40969.1| cell division checkpoint GTPase YihA [Shewanella sp. MR-4] gi|117614873|gb|ABK50327.1| cell division checkpoint GTPase YihA [Shewanella sp. ANA-3] Length = 219 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 106/213 (49%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 SH F ++ FL P+I L P EIAF+GRSN GKSS +N L +KNLART Sbjct: 4 SHIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKNLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F LVD+PGYG+A+ P W + YL +R Sbjct: 62 SKTPGRTQLINVFELD---------AQRRLVDLPGYGFAQVPLAMKLKWQQSLGEYLQKR 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + + Sbjct: 113 ACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRKAL 172 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + +V P S++K G + + E + Sbjct: 173 VEF-GDWVQVEPFSALKGTGKPKVLSILNEWCH 204 >gi|298507043|gb|ADI85766.1| GTPase EngB [Geobacter sulfurreducens KN400] Length = 206 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 12/197 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ P EIAF GRSNVGKSSLIN+LVNRK+L RTS+ PGRTQ +NF Sbjct: 6 SAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINF 65 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F ++ LVD+PGYG+AR P + WG ++ YL+ RS L CV L++D Sbjct: 66 FRVN---------GSLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDV 116 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + D+ + +L + +V+TK DK+S + + P E+ Sbjct: 117 RRTPAEEDRLMLQWLRAYDIPVLVVITKCDKVSKNERAKQASLISRTLGLAP---DEMAF 173 Query: 191 TSSVKRKGIEVLRKAIL 207 S++ R+G + + I Sbjct: 174 FSALSREGRDAIWARIE 190 >gi|39998104|ref|NP_954055.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sulfurreducens PCA] gi|81831965|sp|Q748I9|ENGB_GEOSL RecName: Full=Probable GTP-binding protein EngB gi|39985049|gb|AAR36405.1| GTP-binding protein [Geobacter sulfurreducens PCA] Length = 206 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 12/197 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ P EIAF GRSNVGKSSLIN+LVNRK+L RTS+ PGRTQ +NF Sbjct: 6 SAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINF 65 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F ++ LVD+PGYG+AR P + WG ++ YL+ RS L CV L++D Sbjct: 66 FRVN---------GSLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDV 116 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + D+ + +L + +V+TK DK+S + + P E+ Sbjct: 117 RRTPAEEDRLMLQWLRAYDIPVLVVITKCDKVSKNERAKQASLISRTLGLAP---DEMAF 173 Query: 191 TSSVKRKGIEVLRKAIL 207 S++ R+G + + I Sbjct: 174 FSALSREGRDAIWARIE 190 >gi|227890606|ref|ZP_04008411.1| GTPase [Lactobacillus salivarius ATCC 11741] gi|227867544|gb|EEJ74965.1| GTPase [Lactobacillus salivarius ATCC 11741] Length = 196 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 11/193 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P A PE+A +GRSNVGKSSLIN L+NR+N ARTS+ PG+TQ LNF+ +D Sbjct: 10 ISAVRPEQYPDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQTLNFYNIED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ +K + W +I Y S R L+ L+D RH Sbjct: 70 L---------LYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPS 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 ++D + FL + +V TKIDK+ + ++ + + ++ T + +I S+V Sbjct: 121 ELDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRNKSESQIRKKLQ--LTKNDRLILFSAVD 178 Query: 196 RKGIEVLRKAILE 208 + G + + I + Sbjct: 179 KTGKDEVWDWIED 191 >gi|29655060|ref|NP_820752.1| ribosome biogenesis GTP-binding protein YsxC [Coxiella burnetii RSA 493] gi|81628492|sp|Q83AV6|ENGB_COXBU RecName: Full=Probable GTP-binding protein EngB gi|29542329|gb|AAO91266.1| GTP-binding protein [Coxiella burnetii RSA 493] Length = 205 Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 104/200 (52%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +L E LP EIAF GRSN GKSS +NI+ K LARTS PGRTQ +N Sbjct: 11 QEAKYLTSAAEFDQLPPDQGAEIAFIGRSNAGKSSALNIITGIKGLARTSKTPGRTQMIN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + LVD+PGYGYA+ P+ W L+ YL R L+ + +++D Sbjct: 71 FFALNEHE---------RLVDLPGYGYAKVPRMVQKRWEELVDSYLKNRRCLKGLVVVMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K++D+DV + + I+LTK DKLS A++TL + + I Y + Sbjct: 122 IRHPLKEMDEDVIEWAVNYDIPIHILLTKSDKLSQNAAKKTLGEVQTAISAYGEKL-TLQ 180 Query: 190 PTSSVKRKGIEVLRKAILET 209 SS R G++ ++ + + Sbjct: 181 LFSSHDRTGLDEVKAVLSQW 200 >gi|262373530|ref|ZP_06066808.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter junii SH205] gi|262311283|gb|EEY92369.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter junii SH205] Length = 258 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 74/199 (37%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDTGYEIAFAGRSNAGKSSAINALTNKKQLARASKRPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPEAMKIVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A +TL K ++ + SS Sbjct: 158 LQHFDLMMLEWAHSRHLFVHILLTKADKLNRGPANKTLLDVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + R G+E L + +NY Sbjct: 217 LNRIGLEELASVMGGRLNY 235 >gi|158321195|ref|YP_001513702.1| small GTP-binding protein [Alkaliphilus oremlandii OhILAs] gi|166920107|sp|A8MIS4|ENGB_ALKOO RecName: Full=Probable GTP-binding protein EngB gi|158141394|gb|ABW19706.1| small GTP-binding protein [Alkaliphilus oremlandii OhILAs] Length = 208 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 11/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ G PEIA +GRSNVGKSS +N ++ R+ LAR S +PG+T+ +NF++ Sbjct: 9 VISAVAPKQYPENGLPEIALAGRSNVGKSSTVNTILKRRKLARVSASPGKTRTINFYIVN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + +VD+PGYGYA+ K ++WG ++ YLS R L V LL+D RH Sbjct: 69 N---------EFHIVDLPGYGYAKVSKGEKETWGKMMETYLSSRKNLYEVILLVDIRHEP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ ++ ++ ++ TK DK+S Q+ + + + P ++IP SS+ Sbjct: 120 TADDKMMYDWIKHYGYGSIVIATKSDKISRGAYQKHFKMIREKLGMSPE--DKIIPISSL 177 Query: 195 KRKGIEVLRKAILE 208 KR+GI+ L +I E Sbjct: 178 KREGIDKLWHSIEE 191 >gi|121534152|ref|ZP_01665977.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans Nor1] gi|121307255|gb|EAX48172.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans Nor1] Length = 207 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 94/200 (47%), Gaps = 4/200 (2%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 ++ P PEIAF GRSNVGKSSLIN L LAR S +PG+TQ +N+ Sbjct: 10 KAQYVASAVRPDQYPPEELPEIAFIGRSNVGKSSLINSLCRHHGLARVSASPGKTQTINY 69 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 +V + L LVD+PGYGYARA + W + Y L+ V L+D Sbjct: 70 YVVTAKLPNERRL-EWYLVDLPGYGYARAGQTQRRQWTRFVEEYFLRSPRLKLVCQLVDL 128 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D ++ +L + Q+V TK DK+ T L K ++ +I Sbjct: 129 RHPPQASDVAMYGWLKTHNLPVQVVATKTDKIGRTHVARHLAAIKNGLKLETGG---IIA 185 Query: 191 TSSVKRKGIEVLRKAILETI 210 S++ +G + L I + + Sbjct: 186 YSALNGQGRDDLLDVIGQIL 205 >gi|154707542|ref|YP_001423657.1| ribosome biogenesis GTP-binding protein YsxC [Coxiella burnetii Dugway 5J108-111] gi|165919241|ref|ZP_02219327.1| GTP-binding protein [Coxiella burnetii RSA 334] gi|212211813|ref|YP_002302749.1| ribosome biogenesis GTP-binding protein YsxC [Coxiella burnetii CbuG_Q212] gi|189037175|sp|A9KBW2|ENGB_COXBN RecName: Full=Probable GTP-binding protein EngB gi|238058982|sp|B6J2X4|ENGB_COXB2 RecName: Full=Probable GTP-binding protein EngB gi|154356828|gb|ABS78290.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111] gi|165917035|gb|EDR35639.1| GTP-binding protein [Coxiella burnetii RSA 334] gi|212010223|gb|ACJ17604.1| GTP-binding protein [Coxiella burnetii CbuG_Q212] Length = 205 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 105/200 (52%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +L E LP EIAF GRSN GKSS +NI+ K LARTS PGRTQ +N Sbjct: 11 QEAKYLTSAAEFDQLPPDQGAEIAFIGRSNAGKSSALNIITGIKGLARTSKTPGRTQMIN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + LVD+PGYGYA+ P+ W L+ YL +R L+ + +++D Sbjct: 71 FFALNEHE---------RLVDLPGYGYAKVPRMVQKRWEELVDSYLKKRRCLKGLVVVMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K++D+DV + + I+LTK DKLS A++TL + + I Y + Sbjct: 122 IRHPLKEMDEDVIEWAVNYDIPIHILLTKSDKLSQNAAKKTLGEVQTAISAYGEKL-TLQ 180 Query: 190 PTSSVKRKGIEVLRKAILET 209 SS R G++ ++ + + Sbjct: 181 LFSSHDRTGLDEVKAVLSQW 200 >gi|54293086|ref|YP_125501.1| GTPase EngB [Legionella pneumophila str. Lens] gi|54296120|ref|YP_122489.1| ribosome biogenesis GTP-binding protein YsxC [Legionella pneumophila str. Paris] gi|81601577|sp|Q5X097|ENGB_LEGPL RecName: Full=Probable GTP-binding protein EngB gi|81602058|sp|Q5X8V4|ENGB_LEGPA RecName: Full=Probable GTP-binding protein EngB gi|53749905|emb|CAH11287.1| hypothetical protein lpp0139 [Legionella pneumophila str. Paris] gi|53752918|emb|CAH14354.1| hypothetical protein lpl0124 [Legionella pneumophila str. Lens] gi|307608869|emb|CBW98267.1| hypothetical protein LPW_01251 [Legionella pneumophila 130b] Length = 200 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 105/208 (50%), Gaps = 10/208 (4%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 I S +FL+ + LP+ E+AF+GRSN GKSS +N L N KNLARTS PGR Sbjct: 2 PINLYSKAVFLKSAARVNQLPEDSGYEVAFAGRSNAGKSSALNCLTNNKNLARTSKTPGR 61 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F + LVD+PGYGYA+ + W + YL R LR + Sbjct: 62 TQLINLFSLDE---------QRRLVDLPGYGYAKVAMEVKLEWQKNLAHYLEARQCLRGL 112 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 LL+D RH +K +DQ + ++ + + I+LTK DKLS + + + K + Sbjct: 113 ILLMDVRHPLKDLDQILVNWALHRELPVHILLTKADKLSRSEVKNAVLKVRQYY-ELAEH 171 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETINY 212 V SSVK+ G+E L + + Sbjct: 172 LVSVQAFSSVKKDGVEELISVLDRWYEW 199 >gi|253702485|ref|YP_003023674.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter sp. M21] gi|259645898|sp|C6E8C5|ENGB_GEOSM RecName: Full=Probable GTP-binding protein EngB gi|251777335|gb|ACT19916.1| small GTP-binding protein [Geobacter sp. M21] Length = 214 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 103/197 (52%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P+ PEIAF+GRSNVGKSSL+N+LVNRKNL RTS+ PGRTQ +NFF Sbjct: 8 FIKSATRPAHYPEGHLPEIAFAGRSNVGKSSLVNVLVNRKNLVRTSSTPGRTQLINFFQV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ P W ++ YLS+R LR V L++D R Sbjct: 68 ND---------DFMLVDLPGYGYAKVPLAVKKEWRPMMETYLSKRRNLRGVVLILDIRRT 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + ++L +V IV+TK DK+S + E+ S+ Sbjct: 119 PTEEDLQMLTWLRAFSVPPVIVITKCDKVSKNERARQSAII---MEKMHLKKEELNYFSA 175 Query: 194 VKRKGIEVLRKAILETI 210 + R+G + + I + Sbjct: 176 LSREGKDAVWARIDALL 192 >gi|289434838|ref|YP_003464710.1| GTP-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|315303325|ref|ZP_07873954.1| ribosome biogenesis GTP-binding protein YsxC [Listeria ivanovii FSL F6-596] gi|289171082|emb|CBH27624.1| GTP-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313628305|gb|EFR96809.1| ribosome biogenesis GTP-binding protein YsxC [Listeria ivanovii FSL F6-596] gi|313633109|gb|EFS00007.1| ribosome biogenesis GTP-binding protein YsxC [Listeria seeligeri FSL N1-067] gi|313637682|gb|EFS03061.1| ribosome biogenesis GTP-binding protein YsxC [Listeria seeligeri FSL S4-171] Length = 194 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 11/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ + Sbjct: 9 IISAVRPEQYPETDIPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH Sbjct: 69 E---------ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ ++ FL + +V TK DK+ + + + + + P + + SS Sbjct: 120 TEDDRMMYEFLKYYEIPVIVVATKADKIPRSKWHKNAKIVRETLDFDP--DDKFVLFSSE 177 Query: 195 KRKGIEVLRKAILE 208 + G + + I E Sbjct: 178 TKMGKDEAWQYIKE 191 >gi|254788440|ref|YP_003075869.1| ribosome biogenesis GTP-binding protein YsxC [Teredinibacter turnerae T7901] gi|259645908|sp|C5BJZ8|ENGB_TERTT RecName: Full=Probable GTP-binding protein EngB gi|237684556|gb|ACR11820.1| putative GTP-binding protein [Teredinibacter turnerae T7901] Length = 214 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 98/202 (48%), Gaps = 8/202 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 FL P + P E+AF+GRSN GKSS IN L N LARTS PGRTQ +NF Sbjct: 8 NAQFLISAPSLRECPAEEGAEVAFAGRSNAGKSSAINCLTNNGKLARTSKTPGRTQLINF 67 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + LVD+PGYGYA+ P W + YL +R LR + LL+D Sbjct: 68 FSLGQGA-------QQRLVDLPGYGYAKVPLATKREWQAHLSEYLYKRKCLRGLVLLMDI 120 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH-PEVI 189 RH +++ D + ++ + ++LTK DKL A TL + ++ Sbjct: 121 RHPMQEFDTMMLNWAVDANMPVHLLLTKSDKLKRGAANNTLLQVNRSLKESGVQDLVSAQ 180 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 SS+K G++ L + I +N Sbjct: 181 IFSSLKNVGVQQLEQVITGWLN 202 >gi|16803598|ref|NP_465083.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes EGD-e] gi|224499784|ref|ZP_03668133.1| GTPase EngB [Listeria monocytogenes Finland 1988] gi|224501502|ref|ZP_03669809.1| GTPase EngB [Listeria monocytogenes FSL R2-561] gi|254828207|ref|ZP_05232894.1| GTPase EngB [Listeria monocytogenes FSL N3-165] gi|254831959|ref|ZP_05236614.1| ribosome biogenesis GTP-binding protein YsxC [Listeria monocytogenes 10403S] gi|284801949|ref|YP_003413814.1| GTPase EngB [Listeria monocytogenes 08-5578] gi|284995091|ref|YP_003416859.1| GTPase EngB [Listeria monocytogenes 08-5923] gi|24418381|sp|Q8Y6X3|ENGB_LISMO RecName: Full=Probable GTP-binding protein EngB gi|16410987|emb|CAC99636.1| lmo1558 [Listeria monocytogenes EGD-e] gi|258600596|gb|EEW13921.1| GTPase EngB [Listeria monocytogenes FSL N3-165] gi|284057511|gb|ADB68452.1| GTPase EngB [Listeria monocytogenes 08-5578] gi|284060558|gb|ADB71497.1| GTPase EngB [Listeria monocytogenes 08-5923] Length = 194 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 11/194 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PE A +GRSNVGKSS IN ++ RK++AR S PG+TQ LNF+ + Sbjct: 9 IISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + A+ VD+PGYG+A+ K + WG +I Y++ R LR V ++D RH Sbjct: 69 E---------ALFFVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ ++ FL + ++ TK DK+ + Q+ + + + P + + SS Sbjct: 120 TEDDRMMYEFLKYYDIPVIVIATKADKIPRSKWQKNAKIVRETLDFDP--DDKFVLFSSE 177 Query: 195 KRKGIEVLRKAILE 208 + G + + I E Sbjct: 178 TKMGKDEAWQFIKE 191 >gi|127514643|ref|YP_001095840.1| GTPase EngB [Shewanella loihica PV-4] gi|166225981|sp|A3QJD3|ENGB_SHELP RecName: Full=Probable GTP-binding protein EngB gi|126639938|gb|ABO25581.1| cell division checkpoint GTPase YihA [Shewanella loihica PV-4] Length = 218 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 107/213 (50%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEI----GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 S F ++ FL P+I LP EIAF+GRSN GKSS +N L +KNLART Sbjct: 4 SRIDFRQAK--FLISAPDIAHLDEHLPGDVGVEIAFAGRSNAGKSSALNQLTEQKNLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F + LVD+PGYG+A+ P W + +YL ER Sbjct: 62 SKTPGRTQLINVFALDEHR---------RLVDLPGYGFAQVPLAMKKKWQQALGQYLQER 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L + +L+D RH +K +D + + + +LTK DKL+ + +T+ + + Sbjct: 113 ACLSGLVVLMDIRHPLKDLDMQMIEWAVDCDIPVLALLTKCDKLAQSARMKTVNDVRKAL 172 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++ +V P SS+K G + + E + Sbjct: 173 ADFGDG-VKVEPFSSLKGTGKPKVLGILNEWCH 204 >gi|90407617|ref|ZP_01215798.1| GTP-binding protein [Psychromonas sp. CNPT3] gi|90311320|gb|EAS39424.1| GTP-binding protein [Psychromonas sp. CNPT3] Length = 214 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 109/212 (51%), Gaps = 16/212 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLAR 57 F K+ FL P+I L P E+AF+GRSN GKSS +N L +K+LAR Sbjct: 3 FQKIHFQKA--HFLISAPDIKHLDKHLPPETGIEVAFAGRSNAGKSSALNRLTRQKSLAR 60 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 TS PGRTQ +N F ++ L+D+PGYG+A+ P + W + YL Sbjct: 61 TSKTPGRTQLINVFEVEEGK---------RLIDLPGYGFAKVPLEMKLKWQRSLGEYLQN 111 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 RS+L+ + +L+D RH K++DQ + + + +LTK DKL + TL K + Sbjct: 112 RSSLKGLVVLMDIRHPFKELDQQLIYWAIDANIPVLALLTKADKLKSGARKATLLKMREE 171 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +N+ +V SS+K G+E+L + I Sbjct: 172 AKNF-EGEVDVQLFSSLKGIGVEILEQKIAHW 202 >gi|47566659|ref|ZP_00237481.1| GTP-binding protein [Bacillus cereus G9241] gi|47556689|gb|EAL15021.1| GTP-binding protein [Bacillus cereus G9241] Length = 198 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 97/192 (50%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ Sbjct: 9 VISAVKPEQYPEGDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + M VD+PGYGYA+ K +WG +I Y + R L L++D RH Sbjct: 69 EM---------MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + I+ TK DK+ Q+ L+ K + + EV+ SS Sbjct: 120 TNDDVMMYDFLKHYDIPTIIIATKADKIPKGKWQKHLKVVKETLDI--ESGDEVVLFSSE 177 Query: 195 KRKGIEVLRKAI 206 G E KAI Sbjct: 178 TGLGKEEAWKAI 189 >gi|315038090|ref|YP_004031658.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus amylovorus GRL 1112] gi|325956543|ref|YP_004291955.1| GTP-binding protein YsxC [Lactobacillus acidophilus 30SC] gi|312276223|gb|ADQ58863.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus amylovorus GRL 1112] gi|325333108|gb|ADZ07016.1| GTP-binding protein YsxC [Lactobacillus acidophilus 30SC] gi|327183369|gb|AEA31816.1| GTP-binding protein YsxC [Lactobacillus amylovorus GRL 1118] Length = 196 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 104/195 (53%), Gaps = 10/195 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + PK PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LNF++ D Sbjct: 11 SAVKESQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYLVND- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYA+ +K +G +I YL R L+ + +LID RH + Sbjct: 70 --------EFYLVDVPGYGYAKVSQKRRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++ + + +V TK+DK+ + + + K + + H V+ SSV + Sbjct: 122 DDIAMYEYAQYLNIPILVVCTKMDKIKKSQTNKVMSGLKKNL-DLNYDHVTVLTFSSVTK 180 Query: 197 KGIEVLRKAILETIN 211 + L I + IN Sbjct: 181 LHVAELGDWIEDKIN 195 >gi|309776473|ref|ZP_07671459.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelotrichaceae bacterium 3_1_53] gi|308915864|gb|EFP61618.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelotrichaceae bacterium 3_1_53] Length = 196 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 13/201 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ + P+ P PEI +GRSNVGKSS IN + RK LA N PG+T+ Sbjct: 4 FQKAELV--ISAPDKKSWPDTTLPEIVLAGRSNVGKSSFINAMCGRKKLAYVGNTPGKTR 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNFF D VD+PGYGYA K + +G ++ Y SER+ + V + Sbjct: 62 LLNFFNLDD---------KYMFVDVPGYGYANISKTQLIKFGQMMEDYFSERTQKKGVVI 112 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH D + F + +V TK DK+ PT + + + A Sbjct: 113 LVDARHKPTDDDMTMLEFARYYEIPVAVVATKCDKVPPTKRAHHFAQIRKTL--MLNADE 170 Query: 187 EVIPTSSVKRKGIEVLRKAIL 207 + P S+V+++G+E + ++ Sbjct: 171 PLFPFSAVEKQGMEEIWNYLI 191 >gi|30264537|ref|NP_846914.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Ames] gi|42783606|ref|NP_980853.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus ATCC 10987] gi|47530000|ref|YP_021349.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. 'Ames Ancestor'] gi|49187361|ref|YP_030613.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Sterne] gi|49480673|ref|YP_038519.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141039|ref|YP_085792.1| GTPase EngB [Bacillus cereus E33L] gi|65321838|ref|ZP_00394797.1| COG0218: Predicted GTPase [Bacillus anthracis str. A2012] gi|118479635|ref|YP_896786.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus thuringiensis str. Al Hakam] gi|165872017|ref|ZP_02216658.1| GTP-binding protein [Bacillus anthracis str. A0488] gi|167636218|ref|ZP_02394522.1| GTP-binding protein [Bacillus anthracis str. A0442] gi|170688697|ref|ZP_02879902.1| GTP-binding protein [Bacillus anthracis str. A0465] gi|170708355|ref|ZP_02898799.1| GTP-binding protein [Bacillus anthracis str. A0389] gi|190567036|ref|ZP_03019952.1| GTP-binding protein [Bacillus anthracis Tsiankovskii-I] gi|196034435|ref|ZP_03101844.1| GTP-binding protein [Bacillus cereus W] gi|196039265|ref|ZP_03106571.1| GTP-binding protein [Bacillus cereus NVH0597-99] gi|196044931|ref|ZP_03112165.1| GTP-binding protein [Bacillus cereus 03BB108] gi|206976023|ref|ZP_03236933.1| GTP-binding protein [Bacillus cereus H3081.97] gi|217961961|ref|YP_002340531.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus AH187] gi|218905671|ref|YP_002453505.1| GTP-binding protein [Bacillus cereus AH820] gi|222097915|ref|YP_002531972.1| ribosome biogenesis gtp-binding protein ysxc [Bacillus cereus Q1] gi|225866450|ref|YP_002751828.1| GTP-binding protein [Bacillus cereus 03BB102] gi|227817249|ref|YP_002817258.1| GTP-binding protein [Bacillus anthracis str. CDC 684] gi|229601182|ref|YP_002868753.1| GTP-binding protein [Bacillus anthracis str. A0248] gi|254687041|ref|ZP_05150899.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. CNEVA-9066] gi|254724603|ref|ZP_05186386.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. A1055] gi|254741611|ref|ZP_05199298.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Kruger B] gi|254754791|ref|ZP_05206826.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Vollum] gi|254757623|ref|ZP_05209650.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Australia 94] gi|301055976|ref|YP_003794187.1| GTP-binding protein [Bacillus anthracis CI] gi|81824176|sp|Q633X5|ENGB_BACCZ RecName: Full=Probable GTP-binding protein EngB gi|81828193|sp|Q6HD57|ENGB_BACHK RecName: Full=Probable GTP-binding protein EngB gi|81830956|sp|Q72ZV7|ENGB_BACC1 RecName: Full=Probable GTP-binding protein EngB gi|81837587|sp|Q81LC2|ENGB_BACAN RecName: Full=Probable GTP-binding protein EngB gi|166225942|sp|A0RJ86|ENGB_BACAH RecName: Full=Probable GTP-binding protein EngB gi|226741190|sp|B7HQM9|ENGB_BACC7 RecName: Full=Probable GTP-binding protein EngB gi|226741193|sp|B7JQ62|ENGB_BACC0 RecName: Full=Probable GTP-binding protein EngB gi|254783184|sp|C3P9F4|ENGB_BACAA RecName: Full=Probable GTP-binding protein EngB gi|254783185|sp|C3L700|ENGB_BACAC RecName: Full=Probable GTP-binding protein EngB gi|254783186|sp|C1ETR5|ENGB_BACC3 RecName: Full=Probable GTP-binding protein EngB gi|254783187|sp|B9IZ44|ENGB_BACCQ RecName: Full=Probable GTP-binding protein EngB gi|30259195|gb|AAP28400.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus anthracis str. Ames] gi|42739535|gb|AAS43461.1| GTP-binding protein [Bacillus cereus ATCC 10987] gi|47505148|gb|AAT33824.1| GTP-binding protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181288|gb|AAT56664.1| GTP-binding protein [Bacillus anthracis str. Sterne] gi|49332229|gb|AAT62875.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974508|gb|AAU16058.1| GTP-binding protein [Bacillus cereus E33L] gi|118418860|gb|ABK87279.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam] gi|164712307|gb|EDR17843.1| GTP-binding protein [Bacillus anthracis str. A0488] gi|167528439|gb|EDR91207.1| GTP-binding protein [Bacillus anthracis str. A0442] gi|170126730|gb|EDS95613.1| GTP-binding protein [Bacillus anthracis str. A0389] gi|170667383|gb|EDT18141.1| GTP-binding protein [Bacillus anthracis str. A0465] gi|190562027|gb|EDV15996.1| GTP-binding protein [Bacillus anthracis Tsiankovskii-I] gi|195992977|gb|EDX56936.1| GTP-binding protein [Bacillus cereus W] gi|196024419|gb|EDX63092.1| GTP-binding protein [Bacillus cereus 03BB108] gi|196029892|gb|EDX68493.1| GTP-binding protein [Bacillus cereus NVH0597-99] gi|206745775|gb|EDZ57172.1| GTP-binding protein [Bacillus cereus H3081.97] gi|217067125|gb|ACJ81375.1| GTP-binding protein [Bacillus cereus AH187] gi|218536600|gb|ACK88998.1| GTP-binding protein [Bacillus cereus AH820] gi|221241973|gb|ACM14683.1| GTP-binding protein [Bacillus cereus Q1] gi|225789215|gb|ACO29432.1| GTP-binding protein [Bacillus cereus 03BB102] gi|227006669|gb|ACP16412.1| GTP-binding protein [Bacillus anthracis str. CDC 684] gi|229265590|gb|ACQ47227.1| GTP-binding protein [Bacillus anthracis str. A0248] gi|300378145|gb|ADK07049.1| GTP-binding protein [Bacillus cereus biovar anthracis str. CI] gi|324328373|gb|ADY23633.1| GTP-binding protein YsxC [Bacillus thuringiensis serovar finitimus YBT-020] Length = 198 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 96/192 (50%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ Sbjct: 9 VISAVKPEQYPDGDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + M VD+PGYGYA+ K +WG +I Y + R L L++D RH Sbjct: 69 EM---------MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + I+ TK DK+ Q+ L+ K + + EV+ SS Sbjct: 120 TNDDVMMYDFLKHYDIPTIIIATKADKIPKGKWQKHLKVVKETLDI--ESGDEVVLFSSE 177 Query: 195 KRKGIEVLRKAI 206 G E KAI Sbjct: 178 TGLGKEEAWKAI 189 >gi|237727065|ref|ZP_04557546.1| GTPase EngB [Bacteroides sp. D4] gi|229433921|gb|EEO43998.1| GTPase EngB [Bacteroides dorei 5_1_36/D4] Length = 200 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P+ PE AF GRSNVGKSSLIN+L R LA TS+ PG+T +N Sbjct: 5 SAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLTKRPKLAMTSSTPGKTLLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYA KK V+ +I Y+ ER + +++LIDC Sbjct: 65 FLIN---------KEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDC 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + V + I+ TK DKL+ ++ + K + P Sbjct: 116 RLEPQKIDLEFMEWLGENGVPFSIIFTKADKLTNGKVKDNVNKYLKKLTEQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS K+ G + + I ++IN Sbjct: 176 SSSEKKTGRQEILDYI-DSIN 195 >gi|307731224|ref|YP_003908448.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1003] gi|307585759|gb|ADN59157.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1003] Length = 217 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 103/208 (49%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQ Sbjct: 3 FLLHQSRFFTTVNHLRDLPATAQPEIAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F K + PA LVD+PGYGYA P W L+ YL RS LR + L Sbjct: 63 HINYFSVG-----KADEPAGHLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 118 MMDARRPLTDLDRRMIEWFAPTGKPIHALLTKCDKLTRQESVNALRTTQKGLAEYRAAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + S++KR GIE + I + Sbjct: 178 QGELTAQLFSALKRVGIEEAHELIESWL 205 >gi|296110625|ref|YP_003621006.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154] gi|295832156|gb|ADG40037.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154] Length = 194 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 10/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P G PEIA GRSNVGKSSL N L+ RKN ARTS+ PG+TQ LNF+ + Sbjct: 9 VMSAVSASQYPTDGKPEIALVGRSNVGKSSLTNTLIQRKNFARTSSQPGKTQTLNFYNVE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ KK + +G +I Y++ R LR V L+D RH Sbjct: 69 D---------KLYFVDVPGYGYAKVSKKQREEFGRMIEEYITSRKQLRGVVSLVDARHEP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ +L + +V TK DK+S + K ++ + + + SS Sbjct: 120 SDDDVSMYEWLHFYNIPILVVATKSDKISKGKFNKYESNIKRVLG-FDSDDSDFQFFSSE 178 Query: 195 KRKGIEVLRKAILETI 210 + G + + + I + Sbjct: 179 TKYGKDQVWQWIEAHM 194 >gi|50086223|ref|YP_047733.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter sp. ADP1] gi|49532199|emb|CAG69911.1| putative GTPase, involved in coordination of cell cycle (EngB) [Acinetobacter sp. ADP1] Length = 294 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 9/202 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NF Sbjct: 53 KAEFLMSAPKLSLCVEDTGYEIAFAGRSNAGKSSAINSLTNQKQLARASKKPGRTQMINF 112 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + P LVD+PGYGYA P+ W + YL R +L+ + LL+D Sbjct: 113 FSLGN--------PDQRLVDLPGYGYAAVPEDMKRIWQKELENYLIHRQSLQGLVLLMDI 164 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH ++ D + + + + I+LTK DKL+ A + L K ++ + + Sbjct: 165 RHPLQHFDTMMLEWAHSRKLFVHILLTKADKLNRGPANQVLLDVKQTLKKMKLSF-SIQL 223 Query: 191 TSSVKRKGIEVLRKAILETINY 212 SS+ ++G+E L + +NY Sbjct: 224 FSSLNKQGLEELASVMAGRLNY 245 >gi|239503241|ref|ZP_04662551.1| GTPase EngB [Acinetobacter baumannii AB900] Length = 258 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 105/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P++ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPEEMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L + K ++ + SS Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + + G+E L + +++ Sbjct: 217 LNKLGLEELASVMAGRLHF 235 >gi|146299560|ref|YP_001194151.1| GTPase EngB [Flavobacterium johnsoniae UW101] gi|189037178|sp|A5FIZ1|ENGB_FLAJ1 RecName: Full=Probable GTP-binding protein EngB gi|146153978|gb|ABQ04832.1| GTP-binding protein, HSR1-related [Flavobacterium johnsoniae UW101] Length = 210 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 101/200 (50%), Gaps = 10/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + PK PE AF GRSNVGKSSLIN++ N KNLA+TS PG+TQ +N Sbjct: 4 NTAEFIVSNSDAAKCPKDFLPEYAFIGRSNVGKSSLINMITNHKNLAKTSGKPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD+PGYGYA+ KK + I Y R L C ++LID Sbjct: 64 HFKINN---------NWFLVDLPGYGYAKVSKKTKSIFQQFITDYFENREQLVCAFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAHPEV 188 RH ++ID + S++ + + + I+ TK DK+S + + + N P+ Sbjct: 115 IRHEAQKIDIEFMSYMGESEIPFCIIFTKADKISKGKIDSHIAAYRKQMYANNWAEMPQY 174 Query: 189 IPTSSVKRKGIEVLRKAILE 208 TSS + G + L I E Sbjct: 175 FVTSSTESIGKDELLTYIDE 194 >gi|227514778|ref|ZP_03944827.1| GTPase [Lactobacillus fermentum ATCC 14931] gi|260663640|ref|ZP_05864529.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus fermentum 28-3-CHN] gi|227086887|gb|EEI22199.1| GTPase [Lactobacillus fermentum ATCC 14931] gi|260551866|gb|EEX24981.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus fermentum 28-3-CHN] Length = 197 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 E P PE+A GRSNVGKSSL N+L+NRKN A TS+ PG+TQ LNF+ + Sbjct: 10 ISAVEENQYPATALPELALVGRSNVGKSSLTNVLINRKNYAHTSSQPGKTQTLNFYEVEH 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ KK + +G +I YL+ R LR V L+D RH Sbjct: 70 ---------KLYFVDVPGYGYAKVSKKQREKFGKMIENYLTTREQLRGVVQLVDGRHAPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D+ +F +L + +V TK+DK+ P ++ K + ++I S+ Sbjct: 121 EDDRMMFQWLAYYHIPTLVVATKVDKVKPNAHNRIVKVVKEGLG--AAKDQDLILFSATT 178 Query: 196 RKGIEVLRKAILE 208 +KG E + + I E Sbjct: 179 KKGAESVWQWIEE 191 >gi|148261133|ref|YP_001235260.1| GTPase EngB [Acidiphilium cryptum JF-5] gi|326404534|ref|YP_004284616.1| GTP-binding protein EngB [Acidiphilium multivorum AIU301] gi|146402814|gb|ABQ31341.1| tRNA modification GTPase trmE [Acidiphilium cryptum JF-5] gi|325051396|dbj|BAJ81734.1| GTP-binding protein EngB [Acidiphilium multivorum AIU301] Length = 209 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 87/201 (43%), Positives = 107/201 (53%), Gaps = 9/201 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + A F LP+ EIA +GRSNVGKS+LIN + + LAR + APGRT Sbjct: 13 LFARGA-RFFHAAQTAEGLPEPEGIEIALAGRSNVGKSTLINAITGQVALARVAQAPGRT 71 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + LNFF D + +VDMPGYGYA APK W GL+ RYL R LR V Sbjct: 72 RQLNFFRIGD--------GPLTIVDMPGYGYAAAPKAVKRDWQGLMFRYLRGRPNLRRVL 123 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LL+D R K D V LD+ AVS+Q+VLTK DK+ P L + R +P A Sbjct: 124 LLMDARIEDKPADHAVMELLDQAAVSFQVVLTKADKMKPEALASKLASIGAIARRHPAAL 183 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 EV+ TS GI LR I Sbjct: 184 NEVLVTSGETGAGIAELRAVI 204 >gi|88705359|ref|ZP_01103070.1| GTP-binding protein engB [Congregibacter litoralis KT71] gi|88700449|gb|EAQ97557.1| GTP-binding protein engB [Congregibacter litoralis KT71] Length = 230 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 12/209 (5%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 VS + K+A FL ++ P+ E+AF+GRSN GKSS IN L LARTS Sbjct: 17 VSKPAYRKAA--FLTSAAKVSQCPEDIGWEVAFAGRSNAGKSSAINSLTQNHKLARTSKT 74 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +NFF + +VD+PGYGYA+ P+K W + YL ER +L Sbjct: 75 PGRTQLINFFTVGE---------QQRIVDLPGYGYAKVPQKLKQDWTKQMEAYLQERQSL 125 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 R + LL DCRH ++ DQ + ++ + + ++LTK DKLS ++TL K + + Sbjct: 126 RGLILLSDCRHPLQPFDQQMLTWAAEADMPVHMLLTKCDKLSKGAGKQTLLKVRNSVAPL 185 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETI 210 S++K G L + + + Sbjct: 186 -GELVTCQLFSALKHTGHGELIATLDQWL 213 >gi|330831500|ref|YP_004394452.1| GTPase EngB [Aeromonas veronii B565] gi|328806636|gb|AEB51835.1| GTPase EngB [Aeromonas veronii B565] Length = 205 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 103/195 (52%), Gaps = 10/195 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+I LP G EIAF+GRSN GKSS +N L KNLARTS PGRTQ +N F Sbjct: 1 MTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINLFEL- 59 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 P LVD+PGYGYA+ P + W + YL R +L+ + +L+D RH + Sbjct: 60 --------EPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHPL 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K D ++ + + + ++LTK DKLSP + K + + N + +V SS+ Sbjct: 112 KDTDMNMLEWSSHRQLPVMLLLTKADKLSPGPRNNQVIKVRQAVANL-GSQIQVEAFSSL 170 Query: 195 KRKGIEVLRKAILET 209 G+E L + + E Sbjct: 171 TNIGVEKLAQTLTEW 185 >gi|308051441|ref|YP_003915007.1| cell division checkpoint GTPase YihA [Ferrimonas balearica DSM 9799] gi|307633631|gb|ADN77933.1| cell division checkpoint GTPase YihA [Ferrimonas balearica DSM 9799] Length = 212 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP EIAF+GRSN GKSS +N L + LA TS PGRTQ +N F Sbjct: 13 FVTSAPDIHHLPPDEGVEIAFAGRSNAGKSSALNTLTDHNGLAHTSKRPGRTQLINVFSL 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A+ P + W + YL R L+ + +L+D RH Sbjct: 73 TEDK---------RLVDLPGYGFAKVPLEMKIKWQQALAEYLEHRRCLKGLVVLMDVRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D ++ + + ++LTK DKL +TL K + V SS Sbjct: 124 LKDLDHNMIRWGVAAGMPVLVLLTKADKLKQAEKNKTLRHVKAELAELEGEVV-VQLFSS 182 Query: 194 VKRKGIEVLRKAILETIN 211 +K G E K + E ++ Sbjct: 183 LKGTGREPALKVLNEWLH 200 >gi|332292523|ref|YP_004431132.1| ribosome biogenesis GTP-binding protein YsxC [Krokinobacter diaphorus 4H-3-7-5] gi|332170609|gb|AEE19864.1| ribosome biogenesis GTP-binding protein YsxC [Krokinobacter diaphorus 4H-3-7-5] Length = 203 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E+ P PE AF GRSNVGKSSLIN+L NRK+LA+TS PG+TQ +N F+ Sbjct: 8 FVVSNSEVTKCPNTRIPEYAFIGRSNVGKSSLINMLTNRKSLAKTSGRPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYAR KK+ + I Y +R + ++L+DCRH Sbjct: 68 NE---------NWHLVDLPGYGYARVSKKDKKYFQKFITDYFEQREQMISAFVLVDCRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVIPTS 192 ++ID + +L +K + + I+ TK DKL P + +E K + + P+ +S Sbjct: 119 PQKIDMEFMEYLGEKEIPFSIIFTKADKLRPQALERNIEVYKKIMLDGVWWEFPKYFVSS 178 Query: 193 SVKRKGIEVLRKAILET 209 + G + + I + Sbjct: 179 ASHGDGQDEILGYIEDL 195 >gi|331090539|ref|ZP_08339392.1| GTP-binding protein engB [Lachnospiraceae bacterium 2_1_46FAA] gi|330405882|gb|EGG85410.1| GTP-binding protein engB [Lachnospiraceae bacterium 2_1_46FAA] Length = 201 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 76/185 (41%), Positives = 107/185 (57%), Gaps = 11/185 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP EIAF+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +NF+ Sbjct: 16 SKLPDTELMEIAFAGKSNVGKSSLINALLNRKSLARTSATPGKTQTINFYNVN------- 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + LVD+PGYGYA+ K + WG LI RYL+ LR V+LLID RH D+ + Sbjct: 69 --KELYLVDLPGYGYAKVSPKEKEQWGKLIERYLNTSKKLRAVFLLIDIRHEPTANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + I+ TK+DKL + Q+ ++ K + P +VIP SSV ++G E Sbjct: 127 YDWIVYHGYNPIIIATKLDKLKRSQIQKHVKMVKQGLNLVPGT--KVIPFSSVTKQGREE 184 Query: 202 LRKAI 206 + + Sbjct: 185 IWDLV 189 >gi|295677901|ref|YP_003606425.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1002] gi|295437744|gb|ADG16914.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1002] Length = 220 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 102/208 (49%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHESRFYTTVNHLRDLPATAQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F K +LPA LVD+PGYGYA P W L+ YL RS LR + L Sbjct: 63 HINYFSVG-----KADLPAGYLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L + + Y A Sbjct: 118 MMDSRRPLTDLDRRMIEWFAPTGKPIHTLLTKCDKLTRQESTNALRTAQKGLAEYRAAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 S++KR G++ + I + Sbjct: 178 RGELSAQLFSALKRTGLDEAHELIESWL 205 >gi|212694988|ref|ZP_03303116.1| hypothetical protein BACDOR_04525 [Bacteroides dorei DSM 17855] gi|237710675|ref|ZP_04541156.1| GTPase EngB [Bacteroides sp. 9_1_42FAA] gi|265750348|ref|ZP_06086411.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_33FAA] gi|212662441|gb|EEB23015.1| hypothetical protein BACDOR_04525 [Bacteroides dorei DSM 17855] gi|229455397|gb|EEO61118.1| GTPase EngB [Bacteroides sp. 9_1_42FAA] gi|263237244|gb|EEZ22694.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_33FAA] Length = 200 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P+ PE AF GRSNVGKSSLIN+L R LA TS+ PG+T +N Sbjct: 5 SAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLTKRPKLAMTSSTPGKTLLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYA KK V+ +I Y+ ER + +++LIDC Sbjct: 65 FLIN---------KEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDC 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + V + I+ TK DKL+ ++ + K + P Sbjct: 116 RLEPQKIDLEFMEWLGENGVPFSIIFTKADKLTNGKVKDNVNKYLKKLTEQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS K+ G + + I ++IN Sbjct: 176 SSSEKKTGRQEILDYI-DSIN 195 >gi|52840380|ref|YP_094179.1| ribosome biogenesis GTP-binding protein YsxC [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148358283|ref|YP_001249490.1| GTP binding protein EngB [Legionella pneumophila str. Corby] gi|296105634|ref|YP_003617334.1| GTP binding protein EngB [Legionella pneumophila 2300/99 Alcoy] gi|81603580|sp|Q5ZZ86|ENGB_LEGPH RecName: Full=Probable GTP-binding protein EngB gi|166225963|sp|A5I9U4|ENGB_LEGPC RecName: Full=Probable GTP-binding protein EngB gi|52627491|gb|AAU26232.1| GTP binding protein EngB [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148280056|gb|ABQ54144.1| GTP binding protein EngB [Legionella pneumophila str. Corby] gi|295647535|gb|ADG23382.1| GTP binding protein EngB [Legionella pneumophila 2300/99 Alcoy] Length = 200 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 105/208 (50%), Gaps = 10/208 (4%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 I S +FL+ + LP+ E+AF+GRSN GKSS +N L N KNLARTS PGR Sbjct: 2 PINLYSKAVFLKSAARVNQLPEDSGYEVAFAGRSNAGKSSALNCLTNNKNLARTSKTPGR 61 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F + LVD+PGYGYA+ + W + YL R LR + Sbjct: 62 TQLINLFSLDE---------QRRLVDLPGYGYAKVAMEVKLEWQKNLAHYLEARQCLRGL 112 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 LL+D RH +K +DQ + ++ + + I+LTK DKLS + + + K + Sbjct: 113 ILLMDVRHPLKDLDQILVNWALHRELPVHILLTKADKLSRSEVKNAVLKVRQYY-ELAEH 171 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETINY 212 V SSVK+ G+E L + + Sbjct: 172 LVSVQAFSSVKKDGVEELISLLDRWYEW 199 >gi|323527571|ref|YP_004229724.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1001] gi|323384573|gb|ADX56664.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia sp. CCGE1001] Length = 217 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 103/208 (49%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQ Sbjct: 3 FLLHQSRFFTTVNHLRDLPATAQPEIAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F K + PA LVD+PGYGYA P W L+ YL RS LR + L Sbjct: 63 HINYFSVG-----KADEPAAHLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 118 MMDARRPLTDLDRRMIEWFAPTGKPIHALLTKCDKLTRQESVNALRTTQKGLAEYRAAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + S++KR GIE + I + Sbjct: 178 QGELTAQLFSALKRVGIEEAHELIESWL 205 >gi|114567167|ref|YP_754321.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338102|gb|ABI68950.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 219 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 105/194 (54%), Gaps = 15/194 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +I LP PEIA +GRSNVGKSSLIN + NRKNLA++S+ PG+T+ +N+++ D Sbjct: 40 YVDINQLPVGNIPEIALAGRSNVGKSSLINKICNRKNLAKSSSTPGKTRTINYYLIND-- 97 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 +VD+PGYGYAR ++ W ++ YLS+R LR V L+D RH + Sbjct: 98 -------QWFMVDLPGYGYARVSREEKARWKKMVEAYLSQREQLRGVIQLLDIRHEPGEN 150 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV-IPTSSVKR 196 D + +L + +V TK DKLS + + + + PE+ + S+ Sbjct: 151 DILMKDWLLHLQIPVLVVATKADKLSRGARMKHIAIIRKTL-----DLPEMPLVFSAQSG 205 Query: 197 KGIEVLRKAILETI 210 G+E L+ A+ E + Sbjct: 206 DGVEELKAALAELL 219 >gi|126172308|ref|YP_001048457.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS155] gi|153002842|ref|YP_001368523.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS185] gi|160877587|ref|YP_001556903.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS195] gi|217975429|ref|YP_002360180.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS223] gi|304411972|ref|ZP_07393582.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS183] gi|307305867|ref|ZP_07585613.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica BA175] gi|166225979|sp|A3CYM5|ENGB_SHEB5 RecName: Full=Probable GTP-binding protein EngB gi|166225980|sp|A6WUH1|ENGB_SHEB8 RecName: Full=Probable GTP-binding protein EngB gi|189037188|sp|A9KWY5|ENGB_SHEB9 RecName: Full=Probable GTP-binding protein EngB gi|254783208|sp|B8EDT1|ENGB_SHEB2 RecName: Full=Probable GTP-binding protein EngB gi|125995513|gb|ABN59588.1| cell division checkpoint GTPase YihA [Shewanella baltica OS155] gi|151367460|gb|ABS10460.1| GTP-binding protein HSR1-related [Shewanella baltica OS185] gi|160863109|gb|ABX51643.1| GTP-binding protein HSR1-related [Shewanella baltica OS195] gi|217500564|gb|ACK48757.1| GTP-binding protein HSR1-related [Shewanella baltica OS223] gi|304349522|gb|EFM13930.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS183] gi|306911360|gb|EFN41786.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica BA175] gi|315269785|gb|ADT96638.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella baltica OS678] Length = 219 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 S F ++ FL P+I L P EIAF+GRSN GKSS +N L +K+LART Sbjct: 4 SRIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F LVD+PGYG+A+ P + W + YL +R Sbjct: 62 SKTPGRTQLINVFELD---------AQRRLVDLPGYGFAQVPLALKNKWQQALGEYLQKR 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + + Sbjct: 113 ACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRLAL 172 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + +V P SS+K G + + E + Sbjct: 173 SEF-GDWVQVEPFSSLKGTGKPKVLAILNEWCH 204 >gi|167751930|ref|ZP_02424057.1| hypothetical protein ALIPUT_00172 [Alistipes putredinis DSM 17216] gi|167660171|gb|EDS04301.1| hypothetical protein ALIPUT_00172 [Alistipes putredinis DSM 17216] Length = 198 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 103/201 (51%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + LPK PE AF GRSNVGKSSL+N+L R LA+ S PG+T+ +N Sbjct: 4 NKAQFVCSSERLSQLPKDSLPEFAFIGRSNVGKSSLVNMLTGRSGLAKVSGTPGKTRLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F D + LVD+PGYGYAR K D + +I Y+ + +++L+D Sbjct: 64 HFRIND---------SWYLVDLPGYGYARTSKTQRDEFAKIITDYVLRCERMHFLFVLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R ++ID L ++ + + IV TK DKLS ++E+ K ++ P + Sbjct: 115 SRLEPQKIDLRFIEMLGREGIPFGIVFTKTDKLSAAQLARSVERYKQVLGEQWEGLPPMF 174 Query: 190 PTSSVKRKGIEVLRKAILETI 210 +SS KR G E + I + + Sbjct: 175 RSSSEKRTGREEILDFIGKCL 195 >gi|169794587|ref|YP_001712380.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii AYE] gi|215482176|ref|YP_002324358.1| hypothetical protein ABBFA_000425 [Acinetobacter baumannii AB307-0294] gi|301345003|ref|ZP_07225744.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii AB056] gi|301512066|ref|ZP_07237303.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii AB058] gi|301596097|ref|ZP_07241105.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii AB059] gi|332853132|ref|ZP_08434569.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6013150] gi|332868622|ref|ZP_08438278.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6013113] gi|169147514|emb|CAM85375.1| putative GTPase, involved in coordination of cell cycle (EngB) [Acinetobacter baumannii AYE] gi|213986877|gb|ACJ57176.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294] gi|332728801|gb|EGJ60160.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6013150] gi|332733299|gb|EGJ64493.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6013113] Length = 258 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L + K ++ + SS Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + + G+E L + +++ Sbjct: 217 LNKLGLEELASVMAGRLHF 235 >gi|94501575|ref|ZP_01308092.1| GTP-binding protein [Oceanobacter sp. RED65] gi|94426258|gb|EAT11249.1| GTP-binding protein [Oceanobacter sp. RED65] Length = 200 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 10/197 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P I P+ E+AF+GRSN GKSS +N L + LARTS PGRTQ +N Sbjct: 6 QKAQFLISAPSIRQCPEDNGAEVAFAGRSNAGKSSALNTLAQQNKLARTSKTPGRTQLIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + LVD+PGYG+A+ P++ W + YL +R +L+ + L++D Sbjct: 66 FFEIEE---------GLRLVDLPGYGFAKVPERMKREWQKNMSEYLEQRKSLKAMVLVMD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + + D + + + I+LTK DKL A T K K ++ V Sbjct: 117 IRHPLSEFDLMMCQWALDCNMPTHILLTKADKLKKGPANSTKLKVKKELKEMGDLL-TVQ 175 Query: 190 PTSSVKRKGIEVLRKAI 206 S++KR G++ LR + Sbjct: 176 TFSALKRDGVDQLRSRL 192 >gi|146294988|ref|YP_001185412.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella putrefaciens CN-32] gi|166225982|sp|A4YCD0|ENGB_SHEPC RecName: Full=Probable GTP-binding protein EngB gi|145566678|gb|ABP77613.1| cell division checkpoint GTPase YihA [Shewanella putrefaciens CN-32] gi|319424461|gb|ADV52535.1| cell division control GTP-binding protein, EngB [Shewanella putrefaciens 200] Length = 219 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 107/213 (50%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 SH F ++ FL P+I L P EIAF+GRSN GKSS +N L +K+LART Sbjct: 4 SHIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F LVD+PGYG+A+ P + W + YL +R Sbjct: 62 SKTPGRTQLINVFELD---------SQRRLVDLPGYGFAQVPLAMKNKWQQALGEYLQKR 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + + Sbjct: 113 ACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRKAL 172 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++ V P S++K G + + E + Sbjct: 173 ADF-GDWVLVEPFSALKGTGKPKVLSILNEWCH 204 >gi|330501085|ref|YP_004377954.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas mendocina NK-01] gi|328915371|gb|AEB56202.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas mendocina NK-01] Length = 216 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 98/198 (49%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P+ E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 16 FLISAAKVDQCPEDSGLEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFRL 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ P W + YL R +L + L++D RH Sbjct: 75 DDER---------RLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRESLCGLVLMMDIRHP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + D + + + I+LTK DKL+ A+ L K + IR + S+ Sbjct: 126 LTEFDCMMLDWSVASGMPLHILLTKADKLAFGAAKNALLKVRQDIRKQWGEGISIQLFSA 185 Query: 194 VKRKGIEVLRKAILETIN 211 KR G+E + + ++ Sbjct: 186 PKRMGVEEAQMVLAGWLD 203 >gi|169632344|ref|YP_001706080.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii SDF] gi|260557020|ref|ZP_05829237.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii ATCC 19606] gi|169151136|emb|CAO99805.1| putative GTPase, involved in coordination of cell cycle (EngB) [Acinetobacter baumannii] gi|193078482|gb|ABO13484.2| putative cell cycle coordination GTPase (EngB) [Acinetobacter baumannii ATCC 17978] gi|260409626|gb|EEX02927.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii ATCC 19606] Length = 258 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L + K ++ + SS Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + + G+E L + +++ Sbjct: 217 LNKLGLEELASVMAGRLHF 235 >gi|60681583|ref|YP_211727.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis NCTC 9343] gi|81315351|sp|Q5LDL2|ENGB_BACFN RecName: Full=Probable GTP-binding protein EngB gi|60493017|emb|CAH07797.1| putative GTP-binding cell division protein [Bacteroides fragilis NCTC 9343] Length = 201 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 100/198 (50%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ Sbjct: 8 FVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYAR +K +I Y+ ER + +++LID R Sbjct: 68 NN---------SWYLVDLPGYGYARRGQKGQKQIRTIIEDYILEREQMTNLFVLIDSRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L + + + I+ TK DKL + + +R P TSS Sbjct: 119 PQKIDLEFMEWLGENGIPFAIIFTKADKLKGGRLKINISAYLRELRKQWEELPPYFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 +R G + I E+IN Sbjct: 179 EERLGRTEVLNYI-ESIN 195 >gi|325264759|ref|ZP_08131488.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. D5] gi|324030051|gb|EGB91337.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. D5] Length = 200 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 72/191 (37%), Positives = 113/191 (59%), Gaps = 12/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +LP PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ + Sbjct: 16 SVLPDNDKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ +K WG LI RYL+ + L+ ++LLID RH D+ + Sbjct: 70 ---EMYLVDLPGYGYAKVSEKEKVQWGKLIERYLNGSARLKAIFLLIDIRHEPSANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 +S++ + I+ TK+DK+ + Q+ ++ + + P ++IP SS ++G + Sbjct: 127 YSWIVGQGFQPIIIATKMDKIKRSQIQKHVKMVREGLDLVPGT--KIIPFSSATKQGRDE 184 Query: 202 LRKAIL-ETIN 211 + + I E ++ Sbjct: 185 IWELIESEYLD 195 >gi|313897653|ref|ZP_07831195.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. HGF2] gi|312957605|gb|EFR39231.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium sp. HGF2] Length = 196 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 13/201 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ + P+ P PEI +GRSNVGKSS IN + RK LA N PG+T+ Sbjct: 4 FQKAELV--ISAPDKKSWPDTTLPEIVLAGRSNVGKSSFINAMCGRKKLAYVGNTPGKTR 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNFF D VD+PGYGYA K + +G ++ Y SER+ + V + Sbjct: 62 LLNFFNLDD---------KYMFVDVPGYGYANISKTQLIKFGQMMEDYFSERTQKKGVVI 112 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH D + F + +V TK DK+ PT + ++ A Sbjct: 113 LVDARHKPTDDDMTMLEFARYYEIPVAVVATKCDKVPPTKRAHHFANIRKTLK--LNADE 170 Query: 187 EVIPTSSVKRKGIEVLRKAIL 207 + P S+V+++G+E + ++ Sbjct: 171 PLFPFSAVEKQGMEEIWSYLI 191 >gi|152994783|ref|YP_001339618.1| HSR1-like GTP-binding protein [Marinomonas sp. MWYL1] gi|150835707|gb|ABR69683.1| GTP-binding protein HSR1-related [Marinomonas sp. MWYL1] Length = 214 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F++ ++ P E+AF+GRSN GKS+ +N L N+K LARTS PGRTQ +N Sbjct: 9 QSAHFIKSAEKLSQCPLDQGVEVAFAGRSNAGKSTALNTLTNQKKLARTSKTPGRTQLIN 68 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + L+D+PGYG+A+ P W + YL R +L V L++D Sbjct: 69 CFGLN--------VDDRRLIDLPGYGFAKVPIAMKKVWQAHMQDYLMNRRSLAGVVLVMD 120 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K+ D+ + + + ++LTK DKL A+ T + +++N V Sbjct: 121 IRHPLKEFDEMMLDWAKSNRMKVHVLLTKSDKLKRGPAKSTQLGVQKVLKNL-GVDGSVQ 179 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS+ G++VLR + E + Sbjct: 180 TFSSLSGDGVDVLRIKLAEWL 200 >gi|224539566|ref|ZP_03680105.1| hypothetical protein BACCELL_04473 [Bacteroides cellulosilyticus DSM 14838] gi|224518800|gb|EEF87905.1| hypothetical protein BACCELL_04473 [Bacteroides cellulosilyticus DSM 14838] Length = 201 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N Sbjct: 5 SAEFVISNTDVKKCPPGIFPEYAFIGRSNVGKSSLINMLTGRKGLAMTSATPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ + +VD+PGYGYAR +K +I Y+ ER + ++LLID Sbjct: 65 FLIN---------KSWYIVDLPGYGYARRGQKGKSQIQRIIEDYILEREQMTNLFLLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + ID + +L + + + IV TK DKL +++ ++ P Sbjct: 116 RLEPQVIDIEFMGWLGEHGIPFSIVFTKGDKLKGGRLNTNIQQYLKKLKEQWEELPPYFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 TSS R G + L I E+IN Sbjct: 176 TSSENRMGKKELLDYI-ESIN 195 >gi|184159605|ref|YP_001847944.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii ACICU] gi|332876090|ref|ZP_08443874.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6014059] gi|183211199|gb|ACC58597.1| predicted GTPase [Acinetobacter baumannii ACICU] gi|322509515|gb|ADX04969.1| engB [Acinetobacter baumannii 1656-2] gi|323519535|gb|ADX93916.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii TCDC-AB0715] gi|332735708|gb|EGJ66751.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii 6014059] Length = 258 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L + K ++ + SS Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + + G+E L + +++ Sbjct: 217 LNKLGLEELASVMAGRLHF 235 >gi|225378746|ref|ZP_03755967.1| hypothetical protein ROSEINA2194_04416 [Roseburia inulinivorans DSM 16841] gi|225209405|gb|EEG91759.1| hypothetical protein ROSEINA2194_04416 [Roseburia inulinivorans DSM 16841] Length = 204 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 69/189 (36%), Positives = 108/189 (57%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P E+AF+G+SNVGKSS+IN L+NRK+LARTS PG+TQ +NF+ D Sbjct: 16 SKIPDNPFNEVAFAGKSNVGKSSMINALLNRKSLARTSAQPGKTQTINFYNVND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 AM LVD+PGYGYA+ + WG +I YL L+ V+LLID RH D+ + Sbjct: 70 ---AMYLVDLPGYGYAKTSSSEKEKWGKMIENYLHTSKKLQAVFLLIDIRHDPSANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + I+ TK+DK+ + Q+ ++ + ++ P +IP SS ++G + Sbjct: 127 YDWMVYQGFTPIIIATKLDKIKRSQIQKNVKAIREGLKVKPGTV--IIPFSSETKQGRDE 184 Query: 202 LRKAILETI 210 L + I + Sbjct: 185 LWEVIDSFV 193 >gi|299768659|ref|YP_003730685.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter sp. DR1] gi|298698747|gb|ADI89312.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter sp. DR1] Length = 258 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPEDMKKVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L + K ++ + SS Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + + G+E L + +++ Sbjct: 217 LNKLGLEELASVMGGRLHF 235 >gi|30022557|ref|NP_834188.1| GTPase EngB [Bacillus cereus ATCC 14579] gi|206969843|ref|ZP_03230797.1| GTP-binding protein [Bacillus cereus AH1134] gi|218232512|ref|YP_002369276.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus cereus B4264] gi|296504960|ref|YP_003666660.1| GTPase EngB [Bacillus thuringiensis BMB171] gi|81837282|sp|Q817Q5|ENGB_BACCR RecName: Full=Probable GTP-binding protein EngB gi|226741191|sp|B7HEA1|ENGB_BACC4 RecName: Full=Probable GTP-binding protein EngB gi|29898115|gb|AAP11389.1| GTP-binding protein [Bacillus cereus ATCC 14579] gi|206735531|gb|EDZ52699.1| GTP-binding protein [Bacillus cereus AH1134] gi|218160469|gb|ACK60461.1| GTP-binding protein [Bacillus cereus B4264] gi|296326012|gb|ADH08940.1| GTPase EngB [Bacillus thuringiensis BMB171] Length = 198 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 96/192 (50%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P + PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ Sbjct: 9 VISAVKPEQYPDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + M VD+PGYGYA+ K +WG +I Y + R L L++D RH Sbjct: 69 EM---------MHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDAAVLVVDLRHQP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + I+ TK DK+ Q+ L+ K + E++ SS Sbjct: 120 TSDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSE 177 Query: 195 KRKGIEVLRKAI 206 G E KAI Sbjct: 178 TGLGKEEAWKAI 189 >gi|291533788|emb|CBL06901.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Megamonas hypermegale ART12/1] Length = 222 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 98/197 (49%), Gaps = 3/197 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ + P+ EIAF GRSNVGKSSLIN L NLAR S PG+TQ +NF+ Sbjct: 27 YIASAVKKAQYPEERLKEIAFIGRSNVGKSSLINSLTRVHNLARVSGQPGKTQTINFYEL 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N LVD+PGYGYA+ + N W I Y L+ V LID RH Sbjct: 87 TARFNETGEDKLFHLVDLPGYGYAKTAQTNRKQWAKFIEEYFLHSEHLQFVCQLIDIRHE 146 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+++F +L K + I+ TK DK+S + + + + + +++P SS Sbjct: 147 PMKSDKEMFDWLIKNNIPVLIIATKADKISRGAVHKQIAQIRKSL---GVKEIDILPYSS 203 Query: 194 VKRKGIEVLRKAILETI 210 K++G L I E + Sbjct: 204 PKKQGRAELLNVIYEML 220 >gi|270158580|ref|ZP_06187237.1| GTP-binding domain protein [Legionella longbeachae D-4968] gi|269990605|gb|EEZ96859.1| GTP-binding domain protein [Legionella longbeachae D-4968] Length = 200 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 103/203 (50%), Gaps = 10/203 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S +FL+ + LP E+AF+GRSN GKSS +N L KNLARTS PGRTQ +N Sbjct: 7 SKAVFLKSAARVSQLPDDSGYEVAFAGRSNAGKSSALNCLTGIKNLARTSKTPGRTQLIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD+PGYGYA+ + W + YL R +L+ + LL+D Sbjct: 67 LFQLDEAH---------RLVDLPGYGYAKVALRVKMDWQENLAHYLEVRKSLKGLILLMD 117 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +D + + + + I+LTK DKLS + + T+ K + V Sbjct: 118 IRHPLKDLDVMMVDWALDRGLPVHILLTKSDKLSRSEIKNTVSKVRKYY-ELAQHLITVQ 176 Query: 190 PTSSVKRKGIEVLRKAILETINY 212 SS+K+ GI L + + + + Sbjct: 177 SFSSLKKDGIGELIALLNQWMEF 199 >gi|289166590|ref|YP_003456728.1| GTP-binding protein [Legionella longbeachae NSW150] gi|288859763|emb|CBJ13744.1| GTP-binding protein [Legionella longbeachae NSW150] Length = 202 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 103/203 (50%), Gaps = 10/203 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S +FL+ + LP E+AF+GRSN GKSS +N L KNLARTS PGRTQ +N Sbjct: 9 SKAVFLKSAARVSQLPDDSGYEVAFAGRSNAGKSSALNCLTGIKNLARTSKTPGRTQLIN 68 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD+PGYGYA+ + W + YL R +L+ + LL+D Sbjct: 69 LFQLDEAH---------RLVDLPGYGYAKVALRVKMDWQENLAHYLEVRKSLKGLILLMD 119 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +D + + + + I+LTK DKLS + + T+ K + V Sbjct: 120 IRHPLKDLDVMMVDWALDRGLPVHILLTKSDKLSRSEIKNTVSKVRKYY-ELAQHLITVQ 178 Query: 190 PTSSVKRKGIEVLRKAILETINY 212 SS+K+ GI L + + + + Sbjct: 179 SFSSLKKDGIGELIALLNQWMEF 201 >gi|145300976|ref|YP_001143817.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas salmonicida subsp. salmonicida A449] gi|166225938|sp|A4ST47|ENGB_AERS4 RecName: Full=Probable GTP-binding protein EngB gi|142853748|gb|ABO92069.1| GTP binding protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 217 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 102/193 (52%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP G EIAF+GRSN GKSS +N L KNLARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINLFEL 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P LVD+PGYGYA+ P + W + YL R +L+ + +L+D RH Sbjct: 73 ---------EPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D ++ + + + ++LTK DKLSP + K + I + +V SS Sbjct: 124 LKDTDMNMLEWSSHRELPVMLLLTKADKLSPGPRNNQVIKVRQAIADL-GPQIQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 + G+E L + + Sbjct: 183 LNNIGVEKLAQTL 195 >gi|301057780|ref|ZP_07198849.1| ribosome biogenesis GTP-binding protein YsxC [delta proteobacterium NaphS2] gi|300448091|gb|EFK11787.1| ribosome biogenesis GTP-binding protein YsxC [delta proteobacterium NaphS2] Length = 198 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 77/196 (39%), Positives = 111/196 (56%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P + PE+AF+G+SNVGKSSLIN L R+ LARTS+ PGRTQ +NFF Sbjct: 5 FIKSAFKEEHYPPSDRPEVAFAGKSNVGKSSLINTLTGRRKLARTSSTPGRTQAINFFRF 64 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+AR P K SWG ++ YL R TL+ V +++D R Sbjct: 65 G---------KTLYLVDLPGYGFARVPMKVKKSWGLMVEDYLRSRQTLKAVVVILDIRRD 115 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D D+ ++L+ + +VLTK DK+S A + + K ++ + P + SS Sbjct: 116 PSAGDADLINWLNYYHIVPIVVLTKADKVSRQQAGKRTARIKKSLKGVSFSAP--VLFSS 173 Query: 194 VKRKGIEVLRKAILET 209 R+G+E L K I ET Sbjct: 174 HTRQGVEDLWKRINET 189 >gi|24376139|ref|NP_720182.1| GTPase EngB [Shewanella oneidensis MR-1] gi|81588968|sp|Q8E8J7|ENGB_SHEON RecName: Full=Probable GTP-binding protein EngB gi|24351179|gb|AAN57626.1|AE015898_9 GTP-binding protein EngB [Shewanella oneidensis MR-1] Length = 219 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 SH F ++ FL P+I L P EIAF+GRSN GKSS +N L +KNLART Sbjct: 4 SHIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKNLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F LVD+PGYG+A+ P W + YL +R Sbjct: 62 SKTPGRTQLINVFELD---------AQRRLVDLPGYGFAQVPLAMKMKWQQSLAEYLQKR 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + + Sbjct: 113 ACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRKAL 172 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + +V S++K G + + E + Sbjct: 173 AEF-GDWVQVESFSALKGTGKPKVLSILNEWCH 204 >gi|326560968|gb|EGE11333.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 7169] gi|326567351|gb|EGE17466.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC1] Length = 224 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P L P+ E+AF+GRSN GKSS IN + ++K LAR+S PGRTQ +NFF+ Sbjct: 15 FLLSAPTFKLCPEDTGFEVAFAGRSNAGKSSAINTITHQKQLARSSKTPGRTQMINFFMV 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYGYA P+ W + YL R +L + L+ D RH Sbjct: 75 GDE--------QARIVDLPGYGYAAVPESMKIKWQKELEDYLVSRQSLAGLVLMTDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + ++LTK DKL + L TK + + S+ Sbjct: 127 LKYFDEQMLHWAKDGKLPVHVLLTKSDKLKRGAQKSALLATKKQLEALDLPF-SIQLFSA 185 Query: 194 VKRKGIEVLRKAILETIN 211 +K++G++ L + + ++ Sbjct: 186 LKKEGMDELALVLGDWLH 203 >gi|255568647|ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus communis] gi|223535455|gb|EEF37125.1| GTP-binding protein engB, putative [Ricinus communis] Length = 296 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 97/202 (48%), Gaps = 12/202 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P+ PE A GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 101 FVKSSSRARDCPREDRPEFAILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLINHFLV 160 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+AP W Y R TL V LLID Sbjct: 161 N---------KSWYIVDLPGYGFAKAPASAQTDWSSFTKGYFLNRETLVAVLLLIDASVP 211 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA---QETLEKTKYLIRNYPTAHPEVIP 190 ++ID D +L + + V TK DK+ + E + + LIR HP I Sbjct: 212 PQKIDLDCADWLGRNNIPLTFVFTKCDKMKGGKSTRPDENIRNFQELIRQNYQEHPPWIM 271 Query: 191 TSSVKRKGIEVLRKAILETINY 212 TSSV G + L + + NY Sbjct: 272 TSSVTGLGRDELLLHMSQLRNY 293 >gi|83748180|ref|ZP_00945207.1| GTP-binding protein YihA [Ralstonia solanacearum UW551] gi|207721867|ref|YP_002252305.1| gtpase protein [Ralstonia solanacearum MolK2] gi|207744545|ref|YP_002260937.1| gtpase protein [Ralstonia solanacearum IPO1609] gi|83725148|gb|EAP72299.1| GTP-binding protein YihA [Ralstonia solanacearum UW551] gi|206587034|emb|CAQ17618.1| gtpase protein [Ralstonia solanacearum MolK2] gi|206595951|emb|CAQ62878.1| gtpase protein [Ralstonia solanacearum IPO1609] Length = 233 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA +S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K P LVD+PGYGYA P + W L+ YL R L + +++D R Sbjct: 69 ---MPAKALDPLGFLVDLPGYGYAEVPGEAKSHWEHLLGDYLQTRPQLAGLIIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-----EV 188 ++D + + ++LTK DKL+ A L + ++ +Y T V Sbjct: 126 FTELDCQMVEWFLSTGKPIHVLLTKADKLTNNDASRALMSARKVLADYRTQIEGDVSLTV 185 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ + + Sbjct: 186 QLFSSLKRRGIEEAQRTVAGWL 207 >gi|120596877|ref|YP_961451.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella sp. W3-18-1] gi|166225984|sp|A1RE02|ENGB_SHESW RecName: Full=Probable GTP-binding protein EngB gi|120556970|gb|ABM22897.1| cell division checkpoint GTPase YihA [Shewanella sp. W3-18-1] Length = 219 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 107/213 (50%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 SH F ++ FL P+I L P EIAF+GRSN GKSS +N L +K+LART Sbjct: 4 SHIDFRRAK--FLISAPDIAHLDQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F LVD+PGYG+A+ P + W + YL +R Sbjct: 62 SKTPGRTQLINVFELD---------SQRRLVDLPGYGFAQVPLAMKNKWQQALGEYLQKR 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + + Sbjct: 113 ACLSGVVVLMDIRHPLKDLDMQMIQWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRKAL 172 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++ V P S++K G + + E + Sbjct: 173 ADF-GDWVLVEPFSALKGTGKPKVLSILNEWCH 204 >gi|291548431|emb|CBL21539.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus sp. SR1/5] Length = 203 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 106/188 (56%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P G PE+AF+G+SNVGKSSLIN L+NRK LARTS PG+TQ +NF+ + Sbjct: 16 SKIPDTGRPEVAFAGKSNVGKSSLINGLMNRKALARTSAQPGKTQTINFYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 AM LVD+PGYGYA+ + WG +I YL LR V+LL+D RH D+ + Sbjct: 70 ---AMYLVDLPGYGYAKVSAAEKEKWGKMIEGYLHNSKELRAVFLLVDIRHKPSANDKQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DKL + ++L++ + I +++P S+ ++G + Sbjct: 127 YDWICHNGYEPVIIATKLDKLKRSQVAKSLKEIR--IGLGLPKEGKILPFSAETKQGRDE 184 Query: 202 LRKAILET 209 + I E Sbjct: 185 IWALIDEL 192 >gi|291518670|emb|CBK73891.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Butyrivibrio fibrisolvens 16/4] Length = 206 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 65/189 (34%), Positives = 108/189 (57%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LPK PE+AF+G+SNVGKSSLIN ++NRK LAR S PG+TQ +NF+ D Sbjct: 16 STLPKNDLPEVAFAGKSNVGKSSLINAVMNRKALARVSAQPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + +VD+PGYG+A+A +K + WG +I YL+ +R V+LL+D RH D+ + Sbjct: 70 ---EIYVVDLPGYGFAKASEKERERWGKMIETYLNTSDMIRAVFLLVDIRHTPSANDKQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F ++D ++ TK DK+ + + ++ + + ++P SS ++G++ Sbjct: 127 FEWMDYVGYDPIVIATKADKIKRSQLDKQIKMVREGLGAGKETI--IVPFSSQTKQGLDT 184 Query: 202 LRKAILETI 210 ++ + + I Sbjct: 185 IQDFLDQVI 193 >gi|91785434|ref|YP_560640.1| GTPase EngB [Burkholderia xenovorans LB400] gi|119368799|sp|Q13TK1|ENGB_BURXL RecName: Full=Probable GTP-binding protein EngB gi|91689388|gb|ABE32588.1| cell division checkpoint GTPase YihA [Burkholderia xenovorans LB400] Length = 217 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEI F+GRSN GKS+ INIL N+K LA S PGRTQ Sbjct: 3 FLLHQSRFFTTVNHLQDLPATSQPEICFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + + P LVD+PGYGYA P W L+ YL RS LR + L Sbjct: 63 HINYFSVGNA-----DEPTAHLVDLPGYGYAEVPGAAKAHWEALLSAYLQSRSQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 118 MMDSRRPLTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESVNALRATQKGLAEYRAAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 S++KR GI+ I + Sbjct: 178 RGELTAQLFSALKRIGIDEAHALIESWL 205 >gi|184155097|ref|YP_001843437.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus fermentum IFO 3956] gi|238692961|sp|B2GBC5|ENGB_LACF3 RecName: Full=Probable GTP-binding protein EngB gi|183226441|dbj|BAG26957.1| GTP-binding protein [Lactobacillus fermentum IFO 3956] Length = 197 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 11/193 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 E P PE+A GRSNVGKSSL N+L+NRKN A TS PG+TQ LNF+ + Sbjct: 10 ISAVEENQYPATALPELALVGRSNVGKSSLTNVLINRKNYAHTSGQPGKTQTLNFYEVEH 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ KK + +G +I YL+ R LR V L+D RH Sbjct: 70 ---------KLYFVDVPGYGYAKVSKKQREKFGKMIENYLTTREQLRGVVQLVDGRHAPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D+ +F +L + +V TK+DK+ P ++ K + ++I S+ Sbjct: 121 EDDRMMFQWLAYYHIPTLVVATKVDKVKPNAHNRIVKVVKEGLG--AAKDQDLILFSATT 178 Query: 196 RKGIEVLRKAILE 208 +KG E + + I E Sbjct: 179 KKGAESVWQWIEE 191 >gi|163942217|ref|YP_001647101.1| GTPase EngB [Bacillus weihenstephanensis KBAB4] gi|229807533|sp|A9VIU3|ENGB_BACWK RecName: Full=Probable GTP-binding protein EngB gi|163864414|gb|ABY45473.1| small GTP-binding protein [Bacillus weihenstephanensis KBAB4] Length = 198 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 98/192 (51%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P + PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ Sbjct: 9 VISAVKPEQYPDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + M VD+PGYGYA+ K +WG +I Y + R+ L L++D RH Sbjct: 69 EM---------MHFVDVPGYGYAKVSKTERAAWGRMIETYFTTRTQLDAAVLVVDLRHQP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL + I+ TK DK+ Q+ L+ K + E++ SS Sbjct: 120 TKDDIMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSE 177 Query: 195 KRKGIEVLRKAI 206 G E KAI Sbjct: 178 TGLGKEEAWKAI 189 >gi|188581559|ref|YP_001925004.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium populi BJ001] gi|179345057|gb|ACB80469.1| GTP-binding protein HSR1-related protein [Methylobacterium populi BJ001] Length = 218 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 91/180 (50%), Positives = 112/180 (62%), Gaps = 9/180 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ LNFF + LVD Sbjct: 43 EIAFAGRSNVGKSSLINALTGRNTLARTSHTPGRTQQLNFFRIG---------GRLMLVD 93 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 MPGYGYA K V++W LI YL RS L VYLLID RHG+K+ID D+ LDK AV Sbjct: 94 MPGYGYAAVEKAKVEAWTKLIHAYLKGRSNLARVYLLIDSRHGLKEIDTDLLDGLDKAAV 153 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 SYQ+VLTK D L + ++ + + + P A+PEV+ TSS +G+ LR +I + Sbjct: 154 SYQVVLTKGDALKKSEIEKRIAGIQAALAKRPAAYPEVLLTSSRDDRGVAELRASIARLL 213 >gi|297583716|ref|YP_003699496.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus selenitireducens MLS10] gi|297142173|gb|ADH98930.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus selenitireducens MLS10] Length = 212 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 96/196 (48%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P PE+A SGRSNVGKSS IN L+NRK LARTS PG+TQ LNF++ Sbjct: 9 VISAAKQDQFPGTMIPEVALSGRSNVGKSSFINTLINRKGLARTSQRPGKTQTLNFYIIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D VD+PGYGYA+ K +WG + Y S R L V LID RH Sbjct: 69 DR---------FHFVDVPGYGYAKVSKAERAAWGKTLELYFSSREQLNGVVQLIDSRHKP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ +L ++ TK DK+ ++ ++ + P+ +I SS Sbjct: 120 SEDDILMYDWLKHHGHKVVLIATKCDKIPRGKWAKSKKQISGDLNRDPS--DPLIMFSSE 177 Query: 195 KRKGIEVLRKAILETI 210 +G E + I + + Sbjct: 178 TGQGKEEAWREIKDLL 193 >gi|222053643|ref|YP_002536005.1| small GTP-binding protein domain protein [Geobacter sp. FRC-32] gi|254783197|sp|B9LZU0|ENGB_GEOSF RecName: Full=Probable GTP-binding protein EngB gi|221562932|gb|ACM18904.1| small GTP-binding protein domain protein [Geobacter sp. FRC-32] Length = 207 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P PEIAF+GRSNVGKSSLIN+LVNRK+L RTS+ PGRTQ +NFF Sbjct: 8 FIKSATRAAHYPPGDLPEIAFAGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFDV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYG+A+ P WG ++ YL++R+ LR V L++D R Sbjct: 68 N---------GQFTLVDLPGYGFAKVPLAVKKQWGPMMENYLAKRANLRGVILILDIRRT 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + +L ++ +V+TK DK+S + + E+ S+ Sbjct: 119 PVAEDIQMLHWLQAYSIKPILVITKCDKVSKNERGKQSRIIAQTL---GVETEELNFFSA 175 Query: 194 VKRKGIEVLRKAILETI 210 + R+G +++ + I E + Sbjct: 176 LNREGKDLIWRRIEEVL 192 >gi|91794968|ref|YP_564619.1| GTPase EngB [Shewanella denitrificans OS217] gi|119369252|sp|Q12I30|ENGB_SHEDO RecName: Full=Probable GTP-binding protein EngB gi|91716970|gb|ABE56896.1| cell division checkpoint GTPase YihA [Shewanella denitrificans OS217] Length = 219 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 108/214 (50%), Gaps = 14/214 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLAR 57 +S +I FL P+I L P EIAF+GRSN GKSS +N L +K+LAR Sbjct: 1 MSESIMDFRRAKFLISAPDIAHLNQYLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLAR 60 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 TS PGRTQ +N F D LVD+PGYG+A+ P + W + YL + Sbjct: 61 TSKTPGRTQLINVFALDDDR---------RLVDLPGYGFAQVPLALKNKWQQALGEYLQK 111 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 R+ L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + Sbjct: 112 RACLSGVVVLMDIRHPLKDLDMQMIEWAVASEIPVLALLTKSDKLAQSAKMKTVNEVRSA 171 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + ++ +V P SS+K G + + E + Sbjct: 172 LADF-GDWVKVEPFSSLKGTGKPKVLSILNEWCH 204 >gi|300856720|ref|YP_003781704.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528] gi|300436835|gb|ADK16602.1| predicted GTP-binding protein [Clostridium ljungdahlii DSM 13528] Length = 196 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 11/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P E+AF GRSNVGKSSLIN L NRK L + S PG+T+ +NFF+ Sbjct: 8 FIISAVSPRQYPVDNRVEVAFVGRSNVGKSSLINTLTNRKKLVKVSATPGKTRQINFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ KK +SWG +I +YL+ R L+ + L++DCRH Sbjct: 68 NN---------DFYLVDLPGYGYAKVSKKEKESWGNIIEKYLNARQQLKKIVLILDCRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ ++ IV TKIDK+S + L+ + ++ + E++ S+ Sbjct: 119 PTADDITMYKWIKHYNYDIAIVATKIDKVSKNQLSKNLKVIRDTLKM--SGEDEILTFSA 176 Query: 194 VKRKGIEVLRKAILETIN 211 + ++G E + + + TIN Sbjct: 177 LNKQGKEKILEVLESTIN 194 >gi|220925224|ref|YP_002500526.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium nodulans ORS 2060] gi|219949831|gb|ACL60223.1| GTP-binding protein HSR1-related [Methylobacterium nodulans ORS 2060] Length = 216 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 93/191 (48%), Positives = 112/191 (58%), Gaps = 9/191 (4%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 ++ LP EIAF+GRSNVGKSSLIN L R LARTS+ PGRTQ LNFF Sbjct: 31 KLESLPPMQGHEIAFAGRSNVGKSSLINSLTGRTTLARTSHTPGRTQQLNFFDLG----- 85 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + LVDMPGYGYA K V +W LI YL R+ L VY+LID RHG+K D Sbjct: 86 ----GKLTLVDMPGYGYAAVSKAKVAAWTELIHAYLQGRANLARVYVLIDARHGIKPNDG 141 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V LD AVSYQIVLTK D L + Q L+ T + P A+PE+I TSS +GI Sbjct: 142 EVLDELDAAAVSYQIVLTKGDALKKSEIQARLDATSAALARRPAAYPEIILTSSRTGEGI 201 Query: 200 EVLRKAILETI 210 LR ++ + Sbjct: 202 AELRASVARLL 212 >gi|160933533|ref|ZP_02080921.1| hypothetical protein CLOLEP_02379 [Clostridium leptum DSM 753] gi|156867410|gb|EDO60782.1| hypothetical protein CLOLEP_02379 [Clostridium leptum DSM 753] Length = 199 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 99/194 (51%), Gaps = 12/194 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F G LP PEI FSG+SNVGKSSLIN L+NRKNLAR S PG+T +NF+ Sbjct: 7 VFELAAGRSGQLPAGDLPEIVFSGKSNVGKSSLINKLLNRKNLARVSATPGKTATINFY- 65 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 L LVD+PGYGYA+ W L+ Y + L V L+D RH Sbjct: 66 ---------RLDQARLVDLPGYGYAKVSLAEKKRWAELVEGYFQQERNLALVVQLVDMRH 116 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + FL + + LTK DKL+ T ++ L + +Y +IP S Sbjct: 117 PPTKDDLHMIEFLCDGGFPFLVALTKSDKLNQTERRQRLAALEEAFSDYEGL--RLIPFS 174 Query: 193 SVKRKGIEVLRKAI 206 SV +G+E LR+ + Sbjct: 175 SVTGEGVEELREIL 188 >gi|325856392|ref|ZP_08172108.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola CRIS 18C-A] gi|327312485|ref|YP_004327922.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola F0289] gi|325483576|gb|EGC86548.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola CRIS 18C-A] gi|326944463|gb|AEA20348.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella denticola F0289] Length = 199 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 102/202 (50%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F P + P E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N Sbjct: 4 KKSEFTISSPSVSRCPADTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGYA+ K + +I +Y+ +R L V++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + ID++ +L + + I+ TK DKLSP A+ + + P Sbjct: 115 IRHEQQTIDREFVDWLGGSNIPFSIIFTKADKLSPAKAKSNALMWMKKLEDRWETLPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 TS+ K++G + + I E IN Sbjct: 175 ITSAEKKEGKDEILDYI-EQIN 195 >gi|218899637|ref|YP_002448048.1| GTP-binding protein [Bacillus cereus G9842] gi|226741192|sp|B7IIY0|ENGB_BACC2 RecName: Full=Probable GTP-binding protein EngB gi|218541402|gb|ACK93796.1| GTP-binding protein [Bacillus cereus G9842] gi|326942248|gb|AEA18144.1| GTPase EngB [Bacillus thuringiensis serovar chinensis CT-43] Length = 198 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 69/192 (35%), Positives = 96/192 (50%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P + PEIA +GRSNVGKSS IN ++NRK L R S+ PG+TQ LNFF+ Sbjct: 9 VISAVKPEQYPDSDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTLNFFLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + M VD+PGYGYA+ K +WG +I Y + R L L++D RH Sbjct: 69 EM---------MHFVDVPGYGYAKVSKSERAAWGKMIETYFTTRKQLDAAVLVVDLRHQP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ FL + I+ TK DK+ Q+ L+ K + E++ SS Sbjct: 120 TSDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSE 177 Query: 195 KRKGIEVLRKAI 206 G E KAI Sbjct: 178 TGLGKEEAWKAI 189 >gi|154506027|ref|ZP_02042765.1| hypothetical protein RUMGNA_03569 [Ruminococcus gnavus ATCC 29149] gi|153793526|gb|EDN75946.1| hypothetical protein RUMGNA_03569 [Ruminococcus gnavus ATCC 29149] Length = 206 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 73/183 (39%), Positives = 106/183 (57%), Gaps = 11/183 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ + Sbjct: 16 SKLPENEKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + LVD+PGYGYA+ +K WG LI RYL L+ V+LLID RH D+ + Sbjct: 70 ---ELYLVDLPGYGYAKVSEKEKIQWGNLIERYLHTSKQLKAVFLLIDIRHDPSANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + I+ TK+DKL + Q+ ++ K + P +VIP SSV ++G + Sbjct: 127 YQWIVDQGFQPIIIATKLDKLKRSQVQKHVKMLKTGLNLLPGT--KVIPFSSVTKQGRDE 184 Query: 202 LRK 204 + Sbjct: 185 IWD 187 >gi|119368785|sp|Q6F7Q4|ENGB_ACIAD RecName: Full=Probable GTP-binding protein EngB Length = 237 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 103/197 (52%), Gaps = 9/197 (4%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF + Sbjct: 1 MSAPKLSLCVEDTGYEIAFAGRSNAGKSSAINSLTNQKQLARASKKPGRTQMINFFSLGN 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH ++ Sbjct: 61 --------PDQRLVDLPGYGYAAVPEDMKRIWQKELENYLIHRQSLQGLVLLMDIRHPLQ 112 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + + + I+LTK DKL+ A + L K ++ + + SS+ Sbjct: 113 HFDTMMLEWAHSRKLFVHILLTKADKLNRGPANQVLLDVKQTLKKMKLSF-SIQLFSSLN 171 Query: 196 RKGIEVLRKAILETINY 212 ++G+E L + +NY Sbjct: 172 KQGLEELASVMAGRLNY 188 >gi|226311385|ref|YP_002771279.1| GTP-binding protein EngB [Brevibacillus brevis NBRC 100599] gi|226094333|dbj|BAH42775.1| probable GTP-binding protein EngB [Brevibacillus brevis NBRC 100599] Length = 215 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 96/197 (48%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P G EIA GRSNVGKSSL+N ++NRK LAR S+ PG+TQ LN+F Sbjct: 8 FIISAVGPKQYPTDGLHEIALVGRSNVGKSSLLNKMMNRKGLARISSRPGKTQTLNYFRV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD PGYGYA+ K + WG +I YL R+ LR + L+D RH Sbjct: 68 NQM---------LYFVDFPGYGYAKVAKTIKEQWGKMIEGYLKNRNELRFIIQLVDIRHA 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ + + + +V TK DK++ + + + + +I SS Sbjct: 119 PSKDDIAMYDWCKQIGLPTVVVATKGDKIARGRWLQHTKIIRQSLNLR--GDDTIIVFSS 176 Query: 194 VKRKGIEVLRKAILETI 210 +G + L I+ I Sbjct: 177 ETGQGKDELWAEIMRRI 193 >gi|296535612|ref|ZP_06897792.1| ribosome biogenesis GTP-binding protein YsxC [Roseomonas cervicalis ATCC 49957] gi|296264067|gb|EFH10512.1| ribosome biogenesis GTP-binding protein YsxC [Roseomonas cervicalis ATCC 49957] Length = 221 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 85/201 (42%), Positives = 112/201 (55%), Gaps = 10/201 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + F + LP+A PE+AF GRSNVGKSSL+N L + +LAR S+ PGRT Sbjct: 24 LFCR-PCQFYFAAQRLDQLPEARLPEVAFCGRSNVGKSSLVNALTGQNSLARVSSTPGRT 82 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + LNFF +ALVDMPGYGYA+A K + W GL+ +L R LR V Sbjct: 83 KQLNFFDLG---------GRLALVDMPGYGYAQASKSVKEDWQGLMFEFLRGRPVLRRVV 133 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LL+D R K D+ L+ AV++QIVLTK D P ++ E+ L++ + AH Sbjct: 134 LLLDARIETKASDRAAMELLNNAAVNFQIVLTKADSAKPYWLKQRQEEAAALVKQHTAAH 193 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 P VI TSS GI LR + Sbjct: 194 PLVITTSSETGAGIPELRAEL 214 >gi|296112713|ref|YP_003626651.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis RH4] gi|295920407|gb|ADG60758.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis RH4] gi|326563796|gb|EGE14047.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 46P47B1] gi|326563958|gb|EGE14208.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 12P80B1] gi|326566809|gb|EGE16948.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 103P14B1] gi|326569867|gb|EGE19917.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC8] gi|326571527|gb|EGE21542.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis BC7] gi|326575192|gb|EGE25120.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis CO72] gi|326576722|gb|EGE26629.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis 101P30B1] gi|326577603|gb|EGE27480.1| cell division checkpoint GTPase YihA [Moraxella catarrhalis O35E] Length = 224 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P L P+ E+AF+GRSN GKSS IN + ++K LAR+S PGRTQ +NFF+ Sbjct: 15 FLLSAPTFKLCPEDTGFEVAFAGRSNAGKSSAINTITHQKQLARSSKTPGRTQMINFFMV 74 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D +VD+PGYGYA P+ W + YL R +L + L+ D RH Sbjct: 75 GDE--------QARIVDLPGYGYAAVPESMKIKWQKELEDYLVSRQSLAGLVLMTDIRHP 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + ++LTK DKL + L TK + + S+ Sbjct: 127 LKYFDEQMLHWAKDGKLPVHVLLTKSDKLKRGAQKSALLATKKQLEVLDLPF-SIQLFSA 185 Query: 194 VKRKGIEVLRKAILETIN 211 +K++G++ L + + ++ Sbjct: 186 LKKEGMDELALVLGDWLH 203 >gi|146329655|ref|YP_001209308.1| GTPase [Dichelobacter nodosus VCS1703A] gi|146233125|gb|ABQ14103.1| GTPase [Dichelobacter nodosus VCS1703A] Length = 199 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 9/199 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F V LPK E+AF+GRSN GKSS +N L N+ LAR S PGRTQ +N+F Sbjct: 9 TFSCSVHAAHQLPKDAVVEVAFAGRSNAGKSSALNALTNQATLARVSKTPGRTQLINYFA 68 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ P W L+ YL R L+ V L++D RH Sbjct: 69 LPDAGK--------YLVDLPGYGYAQVPDAVRQHWEHLLGDYLLTRQALKGVVLIMDIRH 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +K +DQ + +A+ ++LTK DKLS + + + + V S Sbjct: 121 PLKPLDQQLLDCCQARALPVHVLLTKADKLSKSAQKMQQNQVANFLAQR-MESSSVQTFS 179 Query: 193 SVKRKGIEVLRKAILETIN 211 S+K++G++ LR + + + Sbjct: 180 SLKKEGLDALRCQLDQWLG 198 >gi|90961519|ref|YP_535435.1| GTP-binding protein [Lactobacillus salivarius UCC118] gi|119369208|sp|Q1WUI3|ENGB_LACS1 RecName: Full=Probable GTP-binding protein EngB gi|90820713|gb|ABD99352.1| GTP-binding protein [Lactobacillus salivarius UCC118] gi|300214356|gb|ADJ78772.1| Probable GTP-binding protein engB [Lactobacillus salivarius CECT 5713] Length = 196 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 11/192 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P A PE+A +GRSNVGKSSLIN L+NR+N ARTS+ PG+TQ LNF+ +D Sbjct: 10 ISAVRPEQYPDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQTLNFYNIED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ +K + W +I Y S R L+ L+D RH Sbjct: 70 L---------LYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPS 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 ++D + FL + +V TKIDK+ + ++ + + ++ T + +I S+V Sbjct: 121 ELDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRNKSESQIRKKLQ--LTKNDRLILFSAVD 178 Query: 196 RKGIEVLRKAIL 207 + G + + I Sbjct: 179 KIGKDEVWNWIE 190 >gi|326803637|ref|YP_004321455.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus urinae ACS-120-V-Col10a] gi|326650781|gb|AEA00964.1| ribosome biogenesis GTP-binding protein YsxC [Aerococcus urinae ACS-120-V-Col10a] Length = 200 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 100/197 (50%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P + PEIA +GRSNVGKSS IN + N K +AR S+ PG+TQ LN++ Sbjct: 9 FMLSAASPKQYPVSDRPEIALAGRSNVGKSSFINTMTNHKKIARISSKPGKTQQLNYY-- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N ++ LVD+PGYGYA+ K W + Y +R L V+LL+D RH Sbjct: 67 -------NLDNSLYLVDVPGYGYAKVSKTERSRWQKQLADYFIQRENLEAVFLLVDFRHR 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ FLD+ V Y I+ TK DK+ L+ K + +++P SS Sbjct: 120 PSKDDINMKDFLDQCQVPYFIIATKADKVKKNQWHNHLQAIKEDLD--LVTEDQILPYSS 177 Query: 194 VKRKGIEVLRKAILETI 210 R+G + + I + Sbjct: 178 ANREGRDEAWEVINALL 194 >gi|300702811|ref|YP_003744412.1| GTP-binding protein engb [Ralstonia solanacearum CFBP2957] gi|299070473|emb|CBJ41768.1| probable GTP-binding protein engB [Ralstonia solanacearum CFBP2957] Length = 233 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA +S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K P LVD+PGYGYA P + W L+ YL R L + +++D R Sbjct: 69 ---MPAKALDPLGFLVDLPGYGYAEVPGEAKSHWEHLLGDYLQTRPQLAGLIIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-----EV 188 +D + + ++LTK DKL+ A L + ++ +Y T V Sbjct: 126 FTDLDCQMVEWFLATGKPIHVLLTKADKLTNNDASRALMSARKVLADYRTQIEGDVSLTV 185 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ + + Sbjct: 186 QLFSSLKRRGIEEAQRTVAGWL 207 >gi|167564385|ref|ZP_02357301.1| GTPase EngB [Burkholderia oklahomensis EO147] Length = 219 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F FL V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFLTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL R LR + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEQLLSTYLQTRPQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 118 MMDSRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESTNALRATQKDLDAYRDAGY 177 Query: 187 ----EVIPTSSVKRKGIEVLRKAILETI 210 V S++KR G++ I + Sbjct: 178 AGKLTVQLFSALKRTGLDDAHALIESWV 205 >gi|88811280|ref|ZP_01126536.1| GTP-binding protein [Nitrococcus mobilis Nb-231] gi|88791819|gb|EAR22930.1| GTP-binding protein [Nitrococcus mobilis Nb-231] Length = 254 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 109/208 (52%), Gaps = 14/208 (6%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 + I+ K+ FL P++ LP E+AF+GRSN GKSS IN L +K LARTS PG Sbjct: 43 NPIYRKA--RFLLSAPDLRHLPPDTGREVAFAGRSNAGKSSAINTLTGQKALARTSKTPG 100 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ +N F D L+D+PGYG+A+ P+ W + YL R +LR Sbjct: 101 RTQQINVFPVSD---------QRYLIDLPGYGFAKLPQAIRAHWQRTLPEYLQRRRSLRG 151 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY-LIRNYP 182 + L++D RH + +DQ + ++ + ++LTK DKL A + L T L R++P Sbjct: 152 LMLIMDVRHPLTALDQQLLAWCGAVGLPVHVLLTKADKLKQGPAAQALRHTAECLARDHP 211 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETI 210 V S+++ +GIE + E + Sbjct: 212 DT--SVQLFSALRARGIETAHGKLDEWL 237 >gi|260549847|ref|ZP_05824063.1| GTPase [Acinetobacter sp. RUH2624] gi|260407097|gb|EEX00574.1| GTPase [Acinetobacter sp. RUH2624] Length = 258 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNKKQLARASKKPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L + K ++ + SS Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + + G+E L + +++ Sbjct: 217 LNKLGLEELASVMAGRLHF 235 >gi|167761300|ref|ZP_02433427.1| hypothetical protein CLOSCI_03705 [Clostridium scindens ATCC 35704] gi|167660966|gb|EDS05096.1| hypothetical protein CLOSCI_03705 [Clostridium scindens ATCC 35704] Length = 200 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 11/186 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ + Sbjct: 16 SQLPDNQLPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + LVD+PGYGYA+ ++ WG LI RYL + L+ V+LLID RH D+ + Sbjct: 70 ---ELYLVDLPGYGYAKVSEQEKAKWGKLIERYLHGSAQLKAVFLLIDIRHDPSANDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + I+ TK+DK+ + + L+ + + +V+P SSV ++G + Sbjct: 127 YDWIVAQGYNPIIIATKLDKIKRSQVDKHLKAVRQGLNLVRGT--KVLPFSSVTKQGKDD 184 Query: 202 LRKAIL 207 + + Sbjct: 185 IWAFVE 190 >gi|168183544|ref|ZP_02618208.1| GTP-binding protein [Clostridium botulinum Bf] gi|237796683|ref|YP_002864235.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum Ba4 str. 657] gi|182673313|gb|EDT85274.1| GTP-binding protein [Clostridium botulinum Bf] gi|229260786|gb|ACQ51819.1| GTP-binding protein [Clostridium botulinum Ba4 str. 657] Length = 194 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 111/198 (56%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + G P+ G PEIAF GRSNVGKS+LIN L NR+ L + S+ PG+T+ +N Sbjct: 6 KKAEFVISAVKRGQYPEDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF+ D M VD+PGYGYA+ KK ++WG ++ +YL ER+ L+ + LL+D Sbjct: 66 FFLIND---------NMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERNQLKKIVLLVD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D ++++++ +V TK+DKL + + + ++ +++ Sbjct: 117 SRHKPTSDDINMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKM--DKDDKIL 174 Query: 190 PTSSVKRKGIEVLRKAIL 207 SS+ ++G E + + IL Sbjct: 175 LISSLSKEGKEEVLEQIL 192 >gi|170758960|ref|YP_001788547.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum A3 str. Loch Maree] gi|169405949|gb|ACA54360.1| GTP-binding protein [Clostridium botulinum A3 str. Loch Maree] Length = 194 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 110/198 (55%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + G P+ G PE+AF GRSNVGKS+LIN L NR+ L + S+ PG+T+ +N Sbjct: 6 KKAEFIISAVKKGQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FFV D M VD+PGYGYA+ K+ ++WG ++ +YL ER L+ + LL+D Sbjct: 66 FFVIND---------NMYFVDLPGYGYAKVSKREKENWGYIMEQYLVERDQLKKIVLLVD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D ++++++ +V TK+DKL + + + ++ +++ Sbjct: 117 SRHKPTSDDINMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKM--DKDDKIL 174 Query: 190 PTSSVKRKGIEVLRKAIL 207 SS+ ++G E + + IL Sbjct: 175 LISSLSKEGKEEVLEQIL 192 >gi|294085068|ref|YP_003551828.1| GTP-binding protein, HSR1-like protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664643|gb|ADE39744.1| GTP-binding protein, HSR1-related protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 219 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 85/194 (43%), Positives = 114/194 (58%), Gaps = 9/194 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + LP G PEI F+GRSNVGKSSL+N L R+ LARTS PGRT+ L FF Sbjct: 29 FTAAANNMPALPPMGLPEICFAGRSNVGKSSLVNALTGRRMLARTSQTPGRTRQLIFFDL 88 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA APK ++++W L ++L+ R +L+ V+LLID R G Sbjct: 89 GQR---------LGLVDLPGYGYASAPKTDIEAWTKLTRKFLAGRQSLQRVFLLIDARRG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + D ++ LD+ AVS+ VLTK DKL P ++ T+ + + A+PE+ TSS Sbjct: 140 VGKGDSEIMKLLDESAVSWAAVLTKADKLKPEALEKVCRATEATVATHVAAYPELFVTSS 199 Query: 194 VKRKGIEVLRKAIL 207 GIE LR I Sbjct: 200 QAGDGIEHLRGHIA 213 >gi|167571532|ref|ZP_02364406.1| GTPase EngB [Burkholderia oklahomensis C6786] Length = 219 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F FL V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFLTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL R LR + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEQLLSTYLQTRPQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 118 MMDSRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESTNALRATQKGLDAYRDAGY 177 Query: 187 ----EVIPTSSVKRKGIEVLRKAILETI 210 V S++KR G++ I + Sbjct: 178 AGKLTVQLFSALKRTGLDDAHALIESWV 205 >gi|150005485|ref|YP_001300229.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus ATCC 8482] gi|254884036|ref|ZP_05256746.1| GTPase EngB [Bacteroides sp. 4_3_47FAA] gi|294778688|ref|ZP_06744107.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus PC510] gi|319640710|ref|ZP_07995424.1| GTP-binding protein engB [Bacteroides sp. 3_1_40A] gi|166225943|sp|A6L4J3|ENGB_BACV8 RecName: Full=Probable GTP-binding protein EngB gi|149933909|gb|ABR40607.1| putative GTP-binding protein [Bacteroides vulgatus ATCC 8482] gi|254836829|gb|EET17138.1| GTPase EngB [Bacteroides sp. 4_3_47FAA] gi|294447344|gb|EFG15925.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides vulgatus PC510] gi|317387672|gb|EFV68537.1| GTP-binding protein engB [Bacteroides sp. 3_1_40A] Length = 200 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P+ PE AF GRSNVGKSSLIN+L R LA TS+ PG+T +N Sbjct: 5 SAEFVVSNTKVEKCPQDNLPEYAFIGRSNVGKSSLINMLAKRPKLAMTSSTPGKTLLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYA KK V+ +I Y+ ER + +++LIDC Sbjct: 65 FLIN---------KEWYLVDLPGYGYASRGKKQVEKIQQIIEDYILEREQMTNLFVLIDC 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + V + I+ TK DKL+ ++ + K + P Sbjct: 116 RLEPQKIDLEFMEWLGENGVPFSIIFTKADKLTNGKVKDNVNKYLKKLTEQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS K+ G + + I ++IN Sbjct: 176 SSSEKKTGRQEILDYI-DSIN 195 >gi|119369240|sp|Q1LI69|ENGB_RALME RecName: Full=Probable GTP-binding protein EngB Length = 227 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+NFF Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSRTPGRTQHINFFTV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +K P LVD+PGYGYA W GL+ Y+ R+ L + L++D R Sbjct: 69 ---APVKAPDPVGFLVDLPGYGYAEVSGSAKFHWQGLLSDYVQARTQLSGLILMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV----- 188 +D + + ++LTK DKL+ + + L +T+ ++ +Y Sbjct: 126 FTDLDCQMVEWFLPTGKPIHVLLTKADKLTTSDNAKALRETRKVLADYAAQMENPPALTA 185 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ + + Sbjct: 186 QLFSSLKRRGIEEAQRVVAGWL 207 >gi|94312216|ref|YP_585426.1| ribosome biogenesis GTP-binding protein YsxC [Cupriavidus metallidurans CH34] gi|93356068|gb|ABF10157.1| GTP-binding protein [Cupriavidus metallidurans CH34] gi|222833714|gb|EEE72191.1| predicted protein [Populus trichocarpa] Length = 250 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+NFF Sbjct: 32 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSRTPGRTQHINFFTV 91 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +K P LVD+PGYGYA W GL+ Y+ R+ L + L++D R Sbjct: 92 ---APVKAPDPVGFLVDLPGYGYAEVSGSAKFHWQGLLSDYVQARTQLSGLILMMDARRP 148 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV----- 188 +D + + ++LTK DKL+ + + L +T+ ++ +Y Sbjct: 149 FTDLDCQMVEWFLPTGKPIHVLLTKADKLTTSDNAKALRETRKVLADYAAQMENPPALTA 208 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ + + Sbjct: 209 QLFSSLKRRGIEEAQRVVAGWL 230 >gi|221135266|ref|ZP_03561569.1| GTP-binding protein [Glaciecola sp. HTCC2999] Length = 216 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 12/206 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 T +TK+ FL P+I L ++ E+AF+GRSN GKSS +N L +KNLARTS PGR Sbjct: 2 TYYTKAK--FLTSAPDIQHLDQSSGVEVAFAGRSNAGKSSALNTLTRQKNLARTSKTPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F D LVD+PGYG+A+ P W + YL +R + + Sbjct: 60 TQLINVFELDDDR---------RLVDLPGYGFAKVPLAMKLKWQKALGEYLQKRECIAGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +L+D RH K +DQD+ + + +LTK DKL + + + + Sbjct: 111 VVLMDIRHPFKDLDQDLIQWAVNADIPVLALLTKADKLKSGKRKAQVLMAREAALAF-CG 169 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 V SS+KR G+ L + + + + Sbjct: 170 DVTVHAFSSLKRIGVNELERKLDQWL 195 >gi|260887083|ref|ZP_05898346.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sputigena ATCC 35185] gi|330839140|ref|YP_004413720.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sputigena ATCC 35185] gi|260863145|gb|EEX77645.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sputigena ATCC 35185] gi|329746904|gb|AEC00261.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sputigena ATCC 35185] Length = 207 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 102/197 (51%), Gaps = 3/197 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ + P+ EI F GRSNVGKSSLIN L KNLAR S PG+TQ +NF+ Sbjct: 12 YIASAVKKEQYPEVRRREIVFIGRSNVGKSSLINSLARTKNLARVSGQPGKTQTINFYEL 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD+PGYGYAR KKN W I YL + L+ V L+D RH Sbjct: 72 GAKIEGEDERCDFYLVDLPGYGYARTAKKNRKIWSRFIEAYLLQSEDLQFVCQLMDIRHE 131 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++F +L K + ++ TK DKLS ++++ + + A +++P SS Sbjct: 132 PMASDIEMFQWLVAKGLPVLVIATKADKLSRNEQKKSIAAMRRAL---GVAELDILPYSS 188 Query: 194 VKRKGIEVLRKAILETI 210 VK +G L AI + Sbjct: 189 VKNEGRSELLDAIANVL 205 >gi|254497291|ref|ZP_05110099.1| GTPase EngB [Legionella drancourtii LLAP12] gi|254353519|gb|EET12246.1| GTPase EngB [Legionella drancourtii LLAP12] Length = 203 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 104/201 (51%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S +FL+ ++ LP+ E+AF+GRSN GKSS +N L K LARTS PGRTQ +N Sbjct: 7 SRAVFLKSAAKVVHLPEDSGYEVAFAGRSNAGKSSALNCLTGIKGLARTSKTPGRTQLIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F D LVD+PGYGYA+ + W + YL R +L+ + LL+D Sbjct: 67 LFSLDDEH---------RLVDLPGYGYAKVALQVKMEWQKHLAHYLDIRKSLKGLVLLMD 117 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + + + I+LTK DKLS + + T+ K + V Sbjct: 118 IRHPLKDLDQMMIDWALNRELPVHILLTKADKLSRSEVKNTVLKVRKHYG-LAEHLVSVQ 176 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS K++G+ L + + + Sbjct: 177 SFSSSKKEGVAELIAVLNQWL 197 >gi|160893845|ref|ZP_02074628.1| hypothetical protein CLOL250_01399 [Clostridium sp. L2-50] gi|156864497|gb|EDO57928.1| hypothetical protein CLOL250_01399 [Clostridium sp. L2-50] Length = 201 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 72/189 (38%), Positives = 109/189 (57%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PEIAF+G+SNVGKSSLIN L+NRK+LARTS+ PG+TQ +N++ Sbjct: 16 STLPETEMPEIAFAGKSNVGKSSLINGLLNRKSLARTSSQPGKTQTINYYNINH------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA+ + WG ++ RYL LR V+LLID RH + D + Sbjct: 70 ---DLYFVDLPGYGYAQVSVEIRAKWGKMVERYLHTSKQLRLVFLLIDIRHEPSENDCIM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ K I+ TK+DK+ + Q+ L+ + I+ P +IP S+ ++G E Sbjct: 127 YDWIVKNGYEPVIIATKLDKIKRSQIQKNLKIIRQKIQ--PVEGTIIIPFSAQTKQGKEE 184 Query: 202 LRKAILETI 210 + + I + I Sbjct: 185 ILQLIEDRI 193 >gi|293610817|ref|ZP_06693117.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827161|gb|EFF85526.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325123612|gb|ADY83135.1| GTP-binding protein [Acinetobacter calcoaceticus PHEA-2] Length = 258 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 46 FLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNKKQLARASKKPGRTQMINFFSL 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH Sbjct: 106 GN--------PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHP 157 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D + + + + I+LTK DKL+ A + L + K ++ + SS Sbjct: 158 LQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSS 216 Query: 194 VKRKGIEVLRKAILETINY 212 + + G+E L + +++ Sbjct: 217 LNKLGLEELASVMAGRLHF 235 >gi|117620801|ref|YP_854796.1| ribosome biogenesis GTP-binding protein YsxC [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166225937|sp|A0KEY0|ENGB_AERHH RecName: Full=Probable GTP-binding protein EngB gi|117562208|gb|ABK39156.1| GTP-binding protein YihA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 216 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 71/193 (36%), Positives = 102/193 (52%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP G EIAF+GRSN GKSS +N L KNLARTS PGRTQ +N F Sbjct: 13 FVTSAPDIRHLPNDGGVEIAFAGRSNAGKSSALNTLTKHKNLARTSKTPGRTQLINLFEL 72 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P LVD+PGYGYA+ P + W + YL R +L+ + +L+D RH Sbjct: 73 ---------EPGKRLVDLPGYGYAQVPLEMKLKWQKSLAEYLQRRESLKGLVILMDIRHP 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D ++ + + + ++LTK DKLSP + K + + +V SS Sbjct: 124 LKDTDMNMLEWSSHRKLPVMLLLTKADKLSPGPRNNQVIKVRQAVAEL-GPQIQVEAFSS 182 Query: 194 VKRKGIEVLRKAI 206 + + G+E L + + Sbjct: 183 LTQIGVEKLAQTL 195 >gi|332667993|ref|YP_004450781.1| GTP-binding protein engB [Haliscomenobacter hydrossis DSM 1100] gi|332336807|gb|AEE53908.1| GTP-binding protein engB [Haliscomenobacter hydrossis DSM 1100] Length = 227 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 9/198 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F P IG PK PE AF GRSNVGKSSLIN+L ++K LA TS PG+TQ LN Sbjct: 26 ATAEFKGSFPSIGQCPKEEWPEFAFIGRSNVGKSSLINMLCDKKELAHTSQKPGKTQLLN 85 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +++ +VD+PGYGYA+ + W +I YL +R +L C ++L+D Sbjct: 86 YYLINQ---------QWYIVDLPGYGYAKISQSKRKEWRKMIQDYLVKRPSLCCAFVLVD 136 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 ++ D + ++L + + + +V TK D+L P +E ++ + + Y P+ Sbjct: 137 SNIKPQEKDIEFINWLGEMHIPFVLVFTKTDRLKPQDIEENIKLMQEKLLEYWNELPQQF 196 Query: 190 PTSSVKRKGIEVLRKAIL 207 TS+ KR G + I Sbjct: 197 FTSASKRVGRTEILDYIE 214 >gi|254515981|ref|ZP_05128041.1| GTP-binding protein EngB [gamma proteobacterium NOR5-3] gi|219675703|gb|EED32069.1| GTP-binding protein EngB [gamma proteobacterium NOR5-3] Length = 231 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 12/209 (5%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S ++ K+ FL ++ P E+AF+GRSN GKSS IN L LARTS Sbjct: 17 ISKPVYRKAE--FLTSAAKVSQCPDDSGWEVAFAGRSNAGKSSAINSLTQNHKLARTSKT 74 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +NFF + +VD+PGYGYA+ P+K W + YL ER +L Sbjct: 75 PGRTQLINFFTVGE---------QQRIVDLPGYGYAKVPQKLKQDWTRQMEAYLQERQSL 125 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 R + LL DCRH ++ D + + + + ++LTK DKLS ++TL K + + ++ Sbjct: 126 RGLILLSDCRHPLQPFDLQMLGWAAEAEMPVHMLLTKCDKLSNGAGKQTLLKVRGKV-SH 184 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETI 210 S++K +G L + + Sbjct: 185 LGDLVSCQLFSALKHQGHGELISVLDHWL 213 >gi|126663224|ref|ZP_01734222.1| GTPase EngB [Flavobacteria bacterium BAL38] gi|126624882|gb|EAZ95572.1| GTPase EngB [Flavobacteria bacterium BAL38] Length = 206 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 78/203 (38%), Positives = 106/203 (52%), Gaps = 14/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ E+ PK PE AF GRSNVGKSSLIN+L N KNLA+TS+ PG+TQ +N Sbjct: 4 NTAEFVISNSEVDKCPKERLPEYAFIGRSNVGKSSLINMLTNHKNLAKTSSKPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD+PGYGYAR KK + I+ Y +R L C ++LID Sbjct: 64 HFKINN---------NWFLVDLPGYGYARVSKKTKAVFQQFIMDYFEQREQLVCAFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY-LIRNYPTAHPEV 188 R ++ID + +L + + + I+ TK DKL +E K L+ P Sbjct: 115 IRLEAQKIDLEFMEYLGESEIPFAIIFTKSDKLGKNKVNNHVEAYKKQLLAGDWAEMPPY 174 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 TSS++ G R+ ILE IN Sbjct: 175 FVTSSLEAIG----REGILEYIN 193 >gi|119369275|sp|Q0AWF4|ENGB_SYNWW RecName: Full=Probable GTP-binding protein EngB Length = 193 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 105/194 (54%), Gaps = 15/194 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +I LP PEIA +GRSNVGKSSLIN + NRKNLA++S+ PG+T+ +N+++ D Sbjct: 14 YVDINQLPVGNIPEIALAGRSNVGKSSLINKICNRKNLAKSSSTPGKTRTINYYLIND-- 71 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 +VD+PGYGYAR ++ W ++ YLS+R LR V L+D RH + Sbjct: 72 -------QWFMVDLPGYGYARVSREEKARWKKMVEAYLSQREQLRGVIQLLDIRHEPGEN 124 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV-IPTSSVKR 196 D + +L + +V TK DKLS + + + + PE+ + S+ Sbjct: 125 DILMKDWLLHLQIPVLVVATKADKLSRGARMKHIAIIRKTL-----DLPEMPLVFSAQSG 179 Query: 197 KGIEVLRKAILETI 210 G+E L+ A+ E + Sbjct: 180 DGVEELKAALAELL 193 >gi|260101783|ref|ZP_05752020.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus helveticus DSM 20075] gi|260084427|gb|EEW68547.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus helveticus DSM 20075] Length = 196 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 10/194 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PK PEIA SGRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 11 SAVREDQYPKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTLNFYLIND- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYAR +K +G +I YL R L+ + +LID RH + Sbjct: 70 --------EFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++++ + +V TKIDK+ + + + + K I + + V+ SSV + Sbjct: 122 DDIAMYNYAQYLNLPILVVCTKIDKIKKSQVNKAMSRLKKNI-DLNYDYVTVLTFSSVTK 180 Query: 197 KGIEVLRKAILETI 210 + L I E I Sbjct: 181 LHVAELGNWIEEKI 194 >gi|238917374|ref|YP_002930891.1| GTP-binding protein [Eubacterium eligens ATCC 27750] gi|259645895|sp|C4Z1T3|ENGB_EUBE2 RecName: Full=Probable GTP-binding protein EngB gi|238872734|gb|ACR72444.1| GTP-binding protein [Eubacterium eligens ATCC 27750] Length = 211 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 107/189 (56%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PE+AF+G+SNVGKSSLIN L+NRK+ ARTS+ PG+TQ +NF+ D Sbjct: 16 STLPETPFPEVAFAGKSNVGKSSLINALMNRKSYARTSSQPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 +M LVD+PGYGYA WG +I +YL + S L+ V+LLID RH D+ + Sbjct: 70 ---SMYLVDLPGYGYANVSPAVKAKWGKMIEKYLRKSSQLKQVFLLIDIRHDPSDNDRMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ IV TK+DK+ + + ++ + + +IP SS ++G++ Sbjct: 127 YDWIVNNGYRPVIVATKLDKIKRSQISKQVKAVRTGLGLRQEDI--LIPFSSQTKQGLKE 184 Query: 202 LRKAILETI 210 L + I + Sbjct: 185 LWQLIDSYV 193 >gi|254237827|ref|ZP_04931150.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126169758|gb|EAZ55269.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 215 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ P E+AF+GRSN GKSS +N L NLARTS PGRTQ LN Sbjct: 12 QKASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLT-HANLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FFV D LVD+PGYGYA+ P W + YLS R++L V+L++D Sbjct: 71 FFVLDDSR---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + + +++TK DKL+ A+ L K + ++ + Sbjct: 122 IRHPLTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQ 181 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 S+ KR+G++ + + + + Sbjct: 182 LFSAPKRQGVDEAQMVLAQWLG 203 >gi|223939366|ref|ZP_03631245.1| GTP-binding protein HSR1-related [bacterium Ellin514] gi|223891970|gb|EEF58452.1| GTP-binding protein HSR1-related [bacterium Ellin514] Length = 196 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 110/201 (54%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ +F P + P+ PE AF GRSNVGKSSL+N+L RK+LAR S PG T+ +N Sbjct: 4 NSAVFEVSAPNLETCPEETLPEFAFIGRSNVGKSSLVNLLAGRKDLARVSKVPGYTKLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF A LVD+PGYGYA ++N + + YL++RS L CV++LID Sbjct: 64 FFTIN---------KAWRLVDLPGYGYAHIARENSARFNDAVSNYLAKRSNLYCVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID + +L +++ ++ TK DK+ Q ++ K I + PE++ Sbjct: 115 SRHKPQKIDLEFVQWLGEQSAPCALIFTKTDKVKAAQLQTNMDLFKESISGWFENVPEIL 174 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SSV + G+ + I E + Sbjct: 175 SCSSVTKNGVREILNVIDEAL 195 >gi|218894595|ref|YP_002443465.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas aeruginosa LESB58] gi|226741187|sp|B7V729|ENGB_PSEA8 RecName: Full=Probable GTP-binding protein EngB gi|218774824|emb|CAW30642.1| putative GTP-binding protein [Pseudomonas aeruginosa LESB58] Length = 215 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ P E+AF+GRSN GKSS +N L NLARTS PGRTQ LN Sbjct: 12 QKASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLT-HANLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYGYA+ P W + YLS R++L V+L++D Sbjct: 71 FFALDDSR---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + + +++TK DKL+ A+ L K + ++ + Sbjct: 122 IRHPLTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQ 181 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 S+ KR+GI+ + + + + Sbjct: 182 LFSAPKRQGIDEAQMVLAQWLG 203 >gi|225438255|ref|XP_002264972.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|225469400|ref|XP_002263516.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 316 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 100/202 (49%), Gaps = 12/202 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ PK PE A GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 121 FVKSSSRPKDCPKDDRPEFAILGRSNVGKSSLINALVRKKEVALTSKKPGKTQLINHFLV 180 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+AP+ W Y R+TL V LLID Sbjct: 181 N---------KSWYIVDLPGYGFAKAPESARMDWSAFTKGYFLNRATLVAVLLLIDASVP 231 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ---ETLEKTKYLIRNYPTAHPEVIP 190 ++ID D ++L + + V TK DK+ + E ++ + ++ HP I Sbjct: 232 PQKIDLDCANWLGRNNIPMTFVFTKCDKMKGGKGKRPDENIKNFQVMMGQNYGKHPPWIM 291 Query: 191 TSSVKRKGIEVLRKAILETINY 212 TSSV G + L + + NY Sbjct: 292 TSSVTGLGRDELLLHMSQLRNY 313 >gi|325286915|ref|YP_004262705.1| GTP-binding protein engB [Cellulophaga lytica DSM 7489] gi|324322369|gb|ADY29834.1| GTP-binding protein engB [Cellulophaga lytica DSM 7489] Length = 206 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 101/194 (52%), Gaps = 10/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P PE AF GRSNVGKSSLIN+L+ RK+LA+TS PG+TQ +N F Sbjct: 8 FVISNSNVKSCPSEPLPEYAFIGRSNVGKSSLINMLMQRKSLAKTSGRPGKTQLINHFKV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYAR KK ++ I Y ER L C ++L+D RH Sbjct: 68 NE---------NWFLVDLPGYGYARVSKKEKKTFQKYITDYFKERIQLVCAFVLVDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTS 192 +++D + ++ + + + ++ TK DKL P Q+ + L+ P+ TS Sbjct: 119 PQKVDLEFLEWMGENQIPFALIFTKADKLKPQVIQKQADNYINALLEGIWEDAPQYFITS 178 Query: 193 SVKRKGIEVLRKAI 206 S G E + + I Sbjct: 179 SANNLGREDVLEFI 192 >gi|322807541|emb|CBZ05116.1| GTP-binding protein EngB [Clostridium botulinum H04402 065] Length = 199 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 109/198 (55%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + P+ G PE+AF GRSNVGKS+LIN L NR+ L + S+ PG+T+ +N Sbjct: 11 KKAEFVISAVKKTQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLIN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FFV D M VD+PGYGYA+ KK ++WG ++ +YL ER L+ + LL+D Sbjct: 71 FFVIND---------NMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D ++++++ +V TK+DKL + + + ++ +++ Sbjct: 122 SRHKPTSDDINMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKM--DKDDKIL 179 Query: 190 PTSSVKRKGIEVLRKAIL 207 SS+ ++G E + + IL Sbjct: 180 LISSLSKEGKEEVLEQIL 197 >gi|125973114|ref|YP_001037024.1| GTP-binding protein [Clostridium thermocellum ATCC 27405] gi|256003908|ref|ZP_05428894.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum DSM 2360] gi|281417306|ref|ZP_06248326.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium thermocellum JW20] gi|125713339|gb|ABN51831.1| GTP-binding protein [Clostridium thermocellum ATCC 27405] gi|255992036|gb|EEU02132.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum DSM 2360] gi|281408708|gb|EFB38966.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium thermocellum JW20] gi|316940660|gb|ADU74694.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium thermocellum DSM 1313] Length = 207 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 73/195 (37%), Positives = 104/195 (53%), Gaps = 11/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F PK PEI F GRSNVGKSSLIN ++NRKNLA+ + PGRT+ +NF+ Sbjct: 14 FEITAVRPEQYPKNDLPEITFVGRSNVGKSSLINTMLNRKNLAKVAATPGRTRVINFYNI 73 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYG+A+ PK W +I YL ER L+ V +L+D RH Sbjct: 74 DD---------KLYFVDLPGYGFAKVPKTMKTGWKDIIETYLIERKQLKKVIMLVDIRHS 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + +L SY +V TK+DK+ T +E + + +++ ++IP SS Sbjct: 125 PTSDDVLMHEWLKAMRKSYVVVATKLDKIPRTKIKERISDIRSILK--LEDDVKIIPFSS 182 Query: 194 VKRKGIEVLRKAILE 208 R+G + L IL+ Sbjct: 183 ETRQGRDELWDEILD 197 >gi|153854550|ref|ZP_01995820.1| hypothetical protein DORLON_01815 [Dorea longicatena DSM 13814] gi|149752859|gb|EDM62790.1| hypothetical protein DORLON_01815 [Dorea longicatena DSM 13814] Length = 196 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 12/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ + Sbjct: 16 SKLPENTLPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + LVD+PGYGYA+ ++ WG LI RYL L+ V+LLID RH D+ + Sbjct: 70 ---ELYLVDLPGYGYAKVSEQEKIKWGQLIERYLHGSKQLKVVFLLIDIRHKPSGNDKMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + I+ TK+DK+ + + ++ K + P VIP SSV ++G + Sbjct: 127 YEWIVSQGFNPVIIATKLDKIKRSQKDKQIKIVKEGLGVLPGTI--VIPFSSVTKQGRDE 184 Query: 202 LRKAIL-ETIN 211 + + + + +N Sbjct: 185 IWELVESQFLN 195 >gi|225568846|ref|ZP_03777871.1| hypothetical protein CLOHYLEM_04925 [Clostridium hylemonae DSM 15053] gi|225162345|gb|EEG74964.1| hypothetical protein CLOHYLEM_04925 [Clostridium hylemonae DSM 15053] Length = 200 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 12/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +LP PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ + Sbjct: 16 SILPDNDHPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINFYNINN------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ +K WG LI RYL L+ V+LLID RH D+ + Sbjct: 70 ---EMYLVDLPGYGYAKVSEKEKMKWGQLIERYLHGSGQLKAVFLLIDIRHEPSANDRMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + I+ TK+DK+ + + ++ + + P +VIP SS+ ++G + Sbjct: 127 YDWIVDQGYEPIIIATKLDKIKRSQVDKHIKMLRTGLDLIPGT--KVIPFSSMTKQGRDE 184 Query: 202 LRKAIL-ETIN 211 + + + E ++ Sbjct: 185 IWELVETEYLD 195 >gi|148381176|ref|YP_001255717.1| GTP-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153931772|ref|YP_001385551.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum A str. ATCC 19397] gi|153935229|ref|YP_001388957.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum A str. Hall] gi|153938105|ref|YP_001392578.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum F str. Langeland] gi|168179123|ref|ZP_02613787.1| GTP-binding protein [Clostridium botulinum NCTC 2916] gi|170757263|ref|YP_001782866.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum B1 str. Okra] gi|226950655|ref|YP_002805746.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum A2 str. Kyoto] gi|148290660|emb|CAL84789.1| probable GTP-binding protein Engb [Clostridium botulinum A str. ATCC 3502] gi|152927816|gb|ABS33316.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152931143|gb|ABS36642.1| GTP-binding protein [Clostridium botulinum A str. Hall] gi|152934001|gb|ABS39499.1| GTP-binding protein [Clostridium botulinum F str. Langeland] gi|169122475|gb|ACA46311.1| GTP-binding protein [Clostridium botulinum B1 str. Okra] gi|182669944|gb|EDT81920.1| GTP-binding protein [Clostridium botulinum NCTC 2916] gi|226842026|gb|ACO84692.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum A2 str. Kyoto] gi|295320563|gb|ADG00941.1| GTP-binding protein [Clostridium botulinum F str. 230613] Length = 194 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 109/198 (55%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + P+ G PE+AF GRSNVGKS+LIN L NR+ L + S+ PG+T+ +N Sbjct: 6 KKAEFVISAVKKTQYPEDGRPEVAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FFV D M VD+PGYGYA+ KK ++WG ++ +YL ER L+ + LL+D Sbjct: 66 FFVIND---------NMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D ++++++ +V TK+DKL + + + ++ +++ Sbjct: 117 SRHKPTSDDINMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKM--DKDDKIL 174 Query: 190 PTSSVKRKGIEVLRKAIL 207 SS+ ++G E + + IL Sbjct: 175 LISSLSKEGKEEVLEQIL 192 >gi|117926943|ref|YP_867560.1| small GTP-binding protein [Magnetococcus sp. MC-1] gi|117610699|gb|ABK46154.1| small GTP-binding protein [Magnetococcus sp. MC-1] Length = 218 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 109/198 (55%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G + P G PE+AF+GRSNVGKSSL+N L+NR+ LAR SN PGRT+ LNFF Sbjct: 14 FVVGAVKPEQYPDDGLPEVAFAGRSNVGKSSLLNKLLNRRQLARVSNTPGRTRELNFFRI 73 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 A VD+PGYGYA+ + + W I Y + R LR V LL+D R G Sbjct: 74 NQ---------AYYYVDLPGYGYAKVGRGQREVWDRGIGLYFNSRRDLRAVILLLDIRRG 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAHPEVIPTS 192 + + DQ + F+ K + VLTK DKL+ +E ++ + ++ P A ++ TS Sbjct: 125 MTEQDQAMLDFIFKMGLPVLPVLTKSDKLNANPRREAIKAMRLMVAEKVPLAVAPLLVTS 184 Query: 193 SVKRKGIEVLRKAILETI 210 S K GI LR+ + + Sbjct: 185 SSKGDGILELRQTLATLL 202 >gi|161507350|ref|YP_001577304.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus helveticus DPC 4571] gi|172048268|sp|A8YUS5|ENGB_LACH4 RecName: Full=Probable GTP-binding protein EngB gi|160348339|gb|ABX27013.1| GTP-binding protein [Lactobacillus helveticus DPC 4571] Length = 196 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 10/194 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PK PEIA SGRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 11 SAVREDQYPKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTLNFYLIND- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYAR +K +G +I YL R L+ + +LID RH + Sbjct: 70 --------EFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++++ + +V TKIDK+ + + + + K I + + V+ SSV + Sbjct: 122 DDIAMYNYAQYLNLPILVVCTKIDKIKKSQVNKVMSRLKKNI-DLNYDYVTVLTFSSVTK 180 Query: 197 KGIEVLRKAILETI 210 + L I E I Sbjct: 181 LHVAELGNWIEEKI 194 >gi|313884146|ref|ZP_07817912.1| ribosome biogenesis GTP-binding protein YsxC [Eremococcus coleocola ACS-139-V-Col8] gi|312620593|gb|EFR32016.1| ribosome biogenesis GTP-binding protein YsxC [Eremococcus coleocola ACS-139-V-Col8] Length = 198 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 104/197 (52%), Gaps = 11/197 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + P+ PE+A +GRSNVGKSS IN L+ RKNLARTS+ PG+TQ LN Sbjct: 4 HDAELVISAVNPSQYPQDQLPEVALAGRSNVGKSSFINSLIARKNLARTSSQPGKTQTLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ A VD+PGYGYAR K +W +I +YLS+R + ++LL+D Sbjct: 64 FYAINQ---------AFRFVDVPGYGYARVSKDFRLAWSKMIEKYLSQRENMELLFLLMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++D+++ F + + Y IVLTK DK+ P + + L K + + + Sbjct: 115 MRHEPTRLDREMKDFAENLDLPYAIVLTKADKIKPASWNKHLSMYKKALE--LPSVDALF 172 Query: 190 PTSSVKRKGIEVLRKAI 206 P S+ K G E + I Sbjct: 173 PYSATKGYGKEEIWDVI 189 >gi|260592424|ref|ZP_05857882.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella veroralis F0319] gi|260535660|gb|EEX18277.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella veroralis F0319] Length = 199 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 101/199 (50%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F P + P E AF GRSNVGKSSLIN+L N K LA+TS PG+T +N Sbjct: 4 KKSEFTISSPSLAKCPDDTKAEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGYA+ K + +I +Y+ +R L V++LID Sbjct: 64 HFIINN---------EWYLVDLPGYGYAKNSKTVRNKLEQMIAQYILQRKQLVNVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID++ +L + V + I+ TK DKLSP A+ +++ P Sbjct: 115 IRHEQQKIDREFVDWLGESNVPFSIIFTKADKLSPAKAKSNALLWMKKLQDRWEVLPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TSS + G + + I + Sbjct: 175 ITSSEDKAGRDEVLDYIDQ 193 >gi|307566351|ref|ZP_07628790.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella amnii CRIS 21A-A] gi|307344928|gb|EFN90326.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella amnii CRIS 21A-A] Length = 201 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 103/198 (52%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P + P PE AF GRSNVGKSSLIN+L N K LA+TS PG+T +N F+ Sbjct: 8 FTISSPTVFKCPNDNKPEYAFIGRSNVGKSSLINMLCNHKGLAKTSAKPGKTLLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA++ K + +I +Y+ +R L V++LID RH Sbjct: 68 N---------KEWYLVDLPGYGYAKSSKSVRNKLEQMIAQYILQRKQLINVFVLIDIRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ID++ +L K + + I+ TK DKL+ A+ + + P TS+ Sbjct: 119 QQTIDREFVDWLGKSNIPFSIIFTKADKLTTGKAKSNALLWMRKLEDTWEELPPYFITSA 178 Query: 194 VKRKGIEVLRKAILETIN 211 K+ G E + I E+IN Sbjct: 179 EKKTGKEEVLNYI-ESIN 195 >gi|121999169|ref|YP_001003956.1| GTP-binding protein, HSR1-like [Halorhodospira halophila SL1] gi|121590574|gb|ABM63154.1| cell division checkpoint GTPase YihA [Halorhodospira halophila SL1] Length = 206 Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 11/209 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + I+ ++ F P L E+AF+GRSNVGKSS++N L ++ LARTS Sbjct: 1 MTADRIYRRA--QFRLSAPTPADLGPDEGVEVAFAGRSNVGKSSVLNALTGQRKLARTSG 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ +N F + L+D+PGYGYA+ P+ W + YL R + Sbjct: 59 TPGRTQAINCFDLDE---------TRRLIDLPGYGYAKVPQAVKRRWERALPDYLRNRQS 109 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L V +++D RH +D + + + VLTK DKL A L+ + Sbjct: 110 LYGVVVIMDVRHAPTDLDLQMLRWCADAGLVLHGVLTKADKLKRGAAHNRLQAVQRATAE 169 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILET 209 P V S++K +GI+ L + E Sbjct: 170 DGVTLPSVQLFSALKGEGIDELTGVLDEW 198 >gi|309782865|ref|ZP_07677585.1| ribosome biogenesis GTP-binding protein YsxC [Ralstonia sp. 5_7_47FAA] gi|308918289|gb|EFP63966.1| ribosome biogenesis GTP-binding protein YsxC [Ralstonia sp. 5_7_47FAA] Length = 263 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F Sbjct: 9 FFITVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSKTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K P LVD+PGYGYA AP + W L+ Y+ R L + +++D R Sbjct: 69 ---MPAKAEDPLGFLVDLPGYGYAEAPGETKSHWVHLLGDYVQARQQLAGLVIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-----EV 188 +D + + ++LTK DKL+ A L + ++ +Y V Sbjct: 126 FTDLDCQMVEWFLPTGKPIHVLLTKADKLTNNDASRALMAARKVLADYRAQIDGDVSLTV 185 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ + + Sbjct: 186 QLFSSLKRRGIEEAQRIVAGWL 207 >gi|241664501|ref|YP_002982861.1| ribosome biogenesis GTP-binding protein YsxC [Ralstonia pickettii 12D] gi|240866528|gb|ACS64189.1| GTP-binding protein HSR1-related [Ralstonia pickettii 12D] Length = 233 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F Sbjct: 9 FFITVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSKTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K P LVD+PGYGYA AP + W L+ Y+ R L + +++D R Sbjct: 69 ---MPAKAEDPLGFLVDLPGYGYAEAPGETKSHWVHLLGDYVQARQQLAGLVIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-----EV 188 +D + + ++LTK DKL+ A L + ++ +Y V Sbjct: 126 FTDLDCQMVEWFLPTGKPIHVLLTKADKLTNNDASRALMAARKVLADYRAQIDGDVSLTV 185 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ + + Sbjct: 186 QLFSSLKRRGIEEAQRIVAGWL 207 >gi|104779390|ref|YP_605888.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas entomophila L48] gi|166225969|sp|Q1IGY1|ENGB_PSEE4 RecName: Full=Probable GTP-binding protein EngB gi|95108377|emb|CAK13071.1| putative GTP-binding protein EngB [Pseudomonas entomophila L48] Length = 210 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 97/201 (48%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F ++ P+ E+AF+GRSN GKSS +N L +LARTS PGRTQ LN Sbjct: 12 QKATFALSAAKVEQCPEDQGYEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYGYA+ P W + YL R LR V L++D Sbjct: 71 FFSLDDER---------RLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRGVILMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + + I+LTK DKL+ + TL K + IR + Sbjct: 122 VRHPMTDFDKMMLDWARASGMPMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDSTTIQ 181 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ KR G+E + + + + Sbjct: 182 LFSAPKRLGLEEAYRVLADWM 202 >gi|289422733|ref|ZP_06424573.1| ribosome biogenesis GTP-binding protein YsxC [Peptostreptococcus anaerobius 653-L] gi|289156912|gb|EFD05537.1| ribosome biogenesis GTP-binding protein YsxC [Peptostreptococcus anaerobius 653-L] Length = 259 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 105/193 (54%), Gaps = 11/193 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P G PEIA +GRSNVGKSS+IN L++RKN ARTS+ PG+T+ +NF++ + Sbjct: 62 MSAVNRSQYPGEGIPEIALAGRSNVGKSSVINGLLSRKNFARTSSTPGKTRTINFYLINE 121 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 VD+PGYGYA+ K + WG ++ YLS+R L ++LL+DCRH Sbjct: 122 ---------EFYFVDLPGYGYAKVAKTEKEKWGAIMEMYLSDRRELCAIFLLVDCRHEPT 172 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D+ ++ ++ + +V TK DK+S Q+ + + ++I TSS Sbjct: 173 ADDKMMYEWIKHFGYNCVVVATKADKISRGQYQKHTSIIRKKLEM--AKEDKIILTSSSS 230 Query: 196 RKGIEVLRKAILE 208 G++VL I++ Sbjct: 231 NVGMKVLWDEIVD 243 >gi|23099530|ref|NP_692996.1| GTPase EngB [Oceanobacillus iheyensis HTE831] gi|81846051|sp|Q8EPM2|ENGB_OCEIH RecName: Full=Probable GTP-binding protein EngB gi|22777760|dbj|BAC14031.1| GTP-binding protein (EngB family) [Oceanobacillus iheyensis HTE831] Length = 195 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 103/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PEIA +GRSNVGKSS IN L+NRKNLARTS+ PG+TQ LNF+ Sbjct: 9 VISAVSKKQYPEDQLPEIALAGRSNVGKSSFINRLINRKNLARTSSKPGKTQTLNFYRIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ KK + WG ++ Y R TLR V L+ D RH Sbjct: 69 E---------SFYFVDVPGYGYAKVSKKEREKWGRMMEEYFQTRDTLRAVVLVTDLRHDP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ F+ + I+ TK+DK++ Q+ + + K ++ IP S+ Sbjct: 120 TQDDIQMYDFIKYFDLPVIIIGTKLDKITKNKRQKHINRAKQVLEM--DETDLFIPFSAE 177 Query: 195 KRKGIEVLRKAILETI 210 +G + A+ I Sbjct: 178 IGEGKDEAWSALSRYI 193 >gi|325104688|ref|YP_004274342.1| ribosome biogenesis GTP-binding protein YsxC [Pedobacter saltans DSM 12145] gi|324973536|gb|ADY52520.1| ribosome biogenesis GTP-binding protein YsxC [Pedobacter saltans DSM 12145] Length = 216 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F +I LP PE AF GRSNVGKSSLIN+L + K LA+TS PG+TQ +N Sbjct: 4 KSAEFTVSNTKISKLPPCVLPEYAFIGRSNVGKSSLINMLTDVKGLAKTSQKPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYGYAR+ K N W I YL +R +L+CV++LID Sbjct: 64 HFLIN---------KEWYLVDLPGYGYARSSKSNRLEWAKFIKNYLEKRESLQCVFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R ++ID + +L ++ + + ++ TK DK +Q+ + K + + P+++ Sbjct: 115 SRLEPQKIDIEFCCYLGERGIPFILIFTKADKNGVNKSQQNMSAFKKEMLKHFEEVPQML 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TSS + G E + I + Sbjct: 175 LTSSETKFGKEEVLSFIQD 193 >gi|229824055|ref|ZP_04450124.1| hypothetical protein GCWU000282_01359 [Catonella morbi ATCC 51271] gi|229786409|gb|EEP22523.1| hypothetical protein GCWU000282_01359 [Catonella morbi ATCC 51271] Length = 195 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 11/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S + P+ PE+A +GRSNVGKSS IN ++ RK LARTS+ PG+TQ LN Sbjct: 4 SQAELVISAVSPKQYPQDALPEVALAGRSNVGKSSFINKMIGRKGLARTSSQPGKTQTLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ VD+PGYGYAR K WG +I YL R +R ++LL+D Sbjct: 64 FYDINQ---------TFRFVDVPGYGYARVSKTARAEWGKMIEHYLLNRDNVRVLFLLMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++D+ + F D+ + Y I+LTK+DK+ + + L K + + PT + Sbjct: 115 FRHEPTELDKAMKDFADEAQIPYAIILTKVDKIKKSQWNKHLSMYKKAL-DLPTVDA-LF 172 Query: 190 PTSSVKRKGIEVLRKAILETI 210 P S+ G + + I I Sbjct: 173 PFSAETGYGAQDIWDVIEAQI 193 >gi|260583671|ref|ZP_05851419.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella elegans ATCC 700633] gi|260158297|gb|EEW93365.1| ribosome biogenesis GTP-binding protein YsxC [Granulicatella elegans ATCC 700633] Length = 197 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 98/197 (49%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P EIA SGRSNVGKSS IN L+ RK+LARTS+ PG+TQ LNF+ Sbjct: 8 FTISAVGPNQYPTDQKVEIALSGRSNVGKSSFINRLIQRKSLARTSSKPGKTQTLNFYHI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D VD+PGYGYA+ KK + WG +I Y++ R L V +L+D RH Sbjct: 68 NDL---------FYFVDVPGYGYAKVSKKEREKWGKMIEEYITTRENLELVLILVDFRHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + FL+ + Y+I++TK DK+ + + + + P + SS Sbjct: 119 PSTEDVQMREFLEYYEIPYRIIMTKCDKIPRGKWNKHVSQIRKAFGKPPEEL--FLTFSS 176 Query: 194 VKRKGIEVLRKAILETI 210 +G+E + I + Sbjct: 177 ETGEGVEKAWEWIESIV 193 >gi|166031006|ref|ZP_02233835.1| hypothetical protein DORFOR_00687 [Dorea formicigenerans ATCC 27755] gi|166029273|gb|EDR48030.1| hypothetical protein DORFOR_00687 [Dorea formicigenerans ATCC 27755] Length = 196 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 113/191 (59%), Gaps = 12/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +LPK PEIAF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +N++ D Sbjct: 16 SVLPKNTKPEIAFAGKSNVGKSSLINALMNRKSYARISATPGKTQTINYYSIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ ++ WG LI RYL + L+ V+LLID RH + D+ + Sbjct: 70 ---EMYLVDLPGYGYAKVSEQEKIKWGQLIERYLHSSAQLKAVFLLIDIRHAPSENDRIM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ ++ I+ TK+DK+ + Q+ ++ + ++ P +IP SS ++G + Sbjct: 127 YQWIVEQGFHPIIIATKLDKIKRSQVQKQMKVLREGLKLIPGT--TIIPFSSQTKQGRDE 184 Query: 202 LRKAIL-ETIN 211 + + + +N Sbjct: 185 IWDMVENQFLN 195 >gi|304311551|ref|YP_003811149.1| GTP-binding protein [gamma proteobacterium HdN1] gi|301797284|emb|CBL45504.1| GTP-binding protein [gamma proteobacterium HdN1] Length = 236 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 98/198 (49%), Gaps = 11/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 FL ++ P E+AF+GRSN GKSS IN + + LARTS PGRTQ LNFF Sbjct: 42 QFLTSAAKLSQCPPDEGREVAFAGRSNAGKSSAINRITQQSKLARTSKTPGRTQLLNFFS 101 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA P+ W + YL R +L V L++D RH Sbjct: 102 VDDHK---------RLVDLPGYGYAEVPEALKVEWQRHLTEYLENRVSLVGVILIMDVRH 152 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +K DQ + + I+LTK DKLS Q++L + K I++Y + V S Sbjct: 153 PLKPFDQMMLDWARAYQFPLHILLTKADKLSRNAGQKSLAEVKRAIKSY--SDVSVQLFS 210 Query: 193 SVKRKGIEVLRKAILETI 210 + + G+ + + + Sbjct: 211 TPESTGLVEAQGVLARWL 228 >gi|187930333|ref|YP_001900820.1| ribosome biogenesis GTP-binding protein YsxC [Ralstonia pickettii 12J] gi|238691835|sp|B2UEI8|ENGB_RALPJ RecName: Full=Probable GTP-binding protein EngB gi|187727223|gb|ACD28388.1| GTP-binding protein HSR1-related [Ralstonia pickettii 12J] Length = 233 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ INIL N+K LA +S PGRTQH+N+F Sbjct: 9 FFITVNHLRDLPATAVPEVAFAGRSNAGKSTAINILCNQKRLAFSSKTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K P LVD+PGYGYA AP + W L+ Y+ R L + +++D R Sbjct: 69 ---MPAKAEDPLGFLVDLPGYGYAEAPGETKSHWVHLLGDYVKARQQLAGLVIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-----EV 188 +D + + ++LTK DKL+ A L + ++ +Y V Sbjct: 126 FTDLDCQMVEWFLPTGKPIHVLLTKADKLTNNDASRALMAARKVLADYRAQIDGDVSLTV 185 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ + + Sbjct: 186 QLFSSLKRRGIEEAQRIVAGWL 207 >gi|227893378|ref|ZP_04011183.1| GTPase [Lactobacillus ultunensis DSM 16047] gi|227864793|gb|EEJ72214.1| GTPase [Lactobacillus ultunensis DSM 16047] Length = 196 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 10/194 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + PK PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LNF++ D Sbjct: 11 SAVKESQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYMVND- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYA+ +K +G +I YL R L+ + +LID RH + Sbjct: 70 --------DFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++++ + +V TK+DK+ + + + K + + H V+ SSV + Sbjct: 122 DDIAMYNYAQYLNIPILVVCTKMDKIKKSQVNKVMSGLKSKL-DLNYDHVTVLTFSSVTK 180 Query: 197 KGIEVLRKAILETI 210 + L I + I Sbjct: 181 LHVAELGDWIEDKI 194 >gi|110639099|ref|YP_679308.1| ribosome biogenesis GTP-binding protein YsxC [Cytophaga hutchinsonii ATCC 33406] gi|119369188|sp|Q11RJ8|ENGB_CYTH3 RecName: Full=Probable GTP-binding protein EngB gi|110281780|gb|ABG59966.1| GTP-binding protein [Cytophaga hutchinsonii ATCC 33406] Length = 199 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 9/200 (4%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K F+ + P+ PE AF GRSNVGKSSLIN L KNLA TS+ PG+TQ + Sbjct: 2 KMNAKFISSYDDYQKCPEITKPEYAFIGRSNVGKSSLINSLTGVKNLAMTSSKPGKTQLI 61 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N F ++ L D+PGYG+A+A + + WG ++ YL R+ L V+LL+ Sbjct: 62 NLFTIEE---------TWILADLPGYGFAKASQSSRIKWGRMVHDYLKNRTNLTTVFLLV 112 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D RH + D + ++L + + ++ TKIDK S T + L ++ P++ Sbjct: 113 DSRHEPMKSDLEQITWLASNGIPFSLIFTKIDKQSLTQTNKILASWTKVLSENWEELPKM 172 Query: 189 IPTSSVKRKGIEVLRKAILE 208 TSS KG E L I E Sbjct: 173 FLTSSESGKGTEELLTYIDE 192 >gi|189466062|ref|ZP_03014847.1| hypothetical protein BACINT_02427 [Bacteroides intestinalis DSM 17393] gi|189434326|gb|EDV03311.1| hypothetical protein BACINT_02427 [Bacteroides intestinalis DSM 17393] Length = 201 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN++ RK LA TS PG+T +N Sbjct: 5 SAEFVISNTDVKKCPPGIFPEYAFIGRSNVGKSSLINMMTGRKGLAMTSATPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ + +VD+PGYGYAR +K +I Y+ ER + +++LID Sbjct: 65 FLIN---------KSWYIVDLPGYGYARRGQKGKSQIQRIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + ID + +L + + + IV TK DKL +++ ++ P Sbjct: 116 RLDPQVIDIEFMGWLGEHGIPFSIVFTKGDKLKGGRLNSNIQQYLKKLKEQWEELPPYFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 TSS R G + L I E+IN Sbjct: 176 TSSENRMGKKELLDYI-ESIN 195 >gi|300309494|ref|YP_003773586.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] gi|300072279|gb|ADJ61678.1| GTP-binding protein [Herbaspirillum seropedicae SmR1] Length = 246 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 12/208 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LPK PEIAF+GRSN GKSS IN+L N+K LA S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPKTSVPEIAFAGRSNAGKSSAINVLCNQKRLAFASKTPGRTQHINYFSI 68 Query: 74 KDFSNLKN-------NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 ++ + LVD+PGYGYA W L+ Y+ +R L + + Sbjct: 69 GGAHVGQHRNDEARPDEIRAMLVDLPGYGYAEVSGSAKHHWQALLGDYVRQREQLAALVM 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R +D + + +L+K DKL+ + L + + +++Y Sbjct: 129 IVDSRRPFTDLDIQMIEWFAPTGKPIHCILSKADKLNRNESTNALRQAQTYLQSYVDEKG 188 Query: 187 EVIP-----TSSVKRKGIEVLRKAILET 209 + P S++KR G+E ILE Sbjct: 189 QPFPFTAQLFSALKRIGLEEANDKILEL 216 >gi|119773234|ref|YP_925974.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella amazonensis SB2B] gi|166225978|sp|A1S1P8|ENGB_SHEAM RecName: Full=Probable GTP-binding protein EngB gi|119765734|gb|ABL98304.1| cell division checkpoint GTPase YihA [Shewanella amazonensis SB2B] Length = 217 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEI----GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 + F ++ FL P+I LP EIAF+GRSN GKSS +N L +K+LART Sbjct: 4 TRIDFRQAK--FLISAPDIAHLDKHLPGDVGVEIAFAGRSNAGKSSALNALTEQKSLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F LVD+PGYG+A+ P + W + YL +R Sbjct: 62 SKTPGRTQLINVFELD---------AQRRLVDLPGYGFAKVPLEMKHKWQNALGEYLQKR 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L V +L+D RH +K +D+ + + + +LTK DKL + +T+ + + Sbjct: 113 ACLSGVVVLMDIRHPLKDLDRQMIEWSVASEIPVLALLTKADKLGQSEKMKTVNAVRKEL 172 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + V P S++K G + + + Sbjct: 173 AEF-GDWVSVEPFSALKGTGKPKVLAILDAWCH 204 >gi|256426042|ref|YP_003126695.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588] gi|256040950|gb|ACU64494.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588] Length = 202 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 9/199 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + +L + P PE AF GRSNVGKSSLIN+L N + LA+TS PG+TQ +N Sbjct: 4 KSAEYLISNVDWQKCPTPNLPEYAFIGRSNVGKSSLINMLANNEKLAKTSGTPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A+ + SW +I YL +R L +++LID Sbjct: 64 HFLIN---------GSWYLVDLPGYGFAKVSQSQRRSWEQMIENYLRKRENLVNIFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +++D + + L + + + +V TK DK + ++ +R P Sbjct: 115 SRHTPQKLDIEFINQLGEWQIPFALVFTKADKSTQAETSRNIKAFLNKLRETWEFLPAHF 174 Query: 190 PTSSVKRKGIEVLRKAILE 208 TS+VK+ G + + I E Sbjct: 175 VTSTVKKMGRDAILSFIDE 193 >gi|255658242|ref|ZP_05403651.1| ribosome biogenesis GTP-binding protein YsxC [Mitsuokella multacida DSM 20544] gi|260849552|gb|EEX69559.1| ribosome biogenesis GTP-binding protein YsxC [Mitsuokella multacida DSM 20544] Length = 234 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 97/202 (48%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ + P+ PE+ F GRSNVGKSSLIN L + LAR S+ PG+TQ +NFF Sbjct: 35 YIASAVKKDQYPERELPEVVFIGRSNVGKSSLINSLTRIRGLARVSSQPGKTQTINFFEL 94 Query: 74 -----KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 S + LVD+PGYGYA+ K+ W I YL L+ V LI Sbjct: 95 TAKLRDPESGEEQGRKDFYLVDLPGYGYAKTGKERRKIWKKFIDEYLLTSPQLQFVCQLI 154 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D RH D ++F +L + V I+ TK DK+ Q+ + + + + Sbjct: 155 DIRHEPMASDVEMFQWLVEHHVPVLIIATKADKIGKNARQKNIAAIRRAL---GVKEISI 211 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 +P SSVK +G L I E + Sbjct: 212 LPYSSVKNEGRSDLLDVIREIL 233 >gi|34499840|ref|NP_904055.1| ribosome biogenesis GTP-binding protein YsxC [Chromobacterium violaceum ATCC 12472] gi|81654051|sp|Q7NPV7|ENGB_CHRVO RecName: Full=Probable GTP-binding protein EngB gi|34105690|gb|AAQ62044.1| GTP-binding protein [Chromobacterium violaceum ATCC 12472] Length = 206 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 104/193 (53%), Gaps = 12/193 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP A E+AF GRSN GKSS IN L NR LA S PGRTQH+NFF Sbjct: 9 FYTTVNHMKDLP-ATRAEVAFVGRSNAGKSSAINTLANRTRLAYVSKTPGRTQHINFFEL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P+ W L+ RYL R +L + L++D RH Sbjct: 68 GD---------ECFLVDLPGYGYAEVPEAVRAHWVELLGRYLQTRQSLIGLLLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D+ + F I+L+K DKLS + L + K + +YP+ V SS Sbjct: 119 LKELDRRMLEFFRVAGRPVHILLSKADKLSRQEQNKVLAEVKRELADYPS--VSVQMFSS 176 Query: 194 VKRKGIEVLRKAI 206 +K+ G++V+ + + Sbjct: 177 LKKTGVDVVEQVV 189 >gi|301300955|ref|ZP_07207120.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851422|gb|EFK79141.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus salivarius ACS-116-V-Col5a] Length = 196 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 102/192 (53%), Gaps = 11/192 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P A PE+A +GRSNVGKSSLIN L+NR+N ARTS+ PG+TQ LNF+ +D Sbjct: 10 ISAVRPEQYPDAKLPEVALAGRSNVGKSSLINTLINRRNYARTSSQPGKTQTLNFYNIED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ +K + W +I Y S R L+ L+D RH Sbjct: 70 L---------LYFVDVPGYGYAKVSQKEREKWARMIETYFSTRQELKGAISLVDARHEPS 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 ++D + FL + +V TKIDK+ + ++ + + ++ T + +I S++ Sbjct: 121 ELDCQMIEFLHYYNIPVLVVGTKIDKIPKSKRNKSESQIRKKLQ--LTKNDRLILFSAID 178 Query: 196 RKGIEVLRKAIL 207 + G + + I Sbjct: 179 KIGKDEVWNWIE 190 >gi|227877366|ref|ZP_03995437.1| GTPase [Lactobacillus crispatus JV-V01] gi|256842925|ref|ZP_05548413.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus 125-2-CHN] gi|256848700|ref|ZP_05554134.1| ATP-dependent protease [Lactobacillus crispatus MV-1A-US] gi|262045892|ref|ZP_06018856.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus MV-3A-US] gi|293381820|ref|ZP_06627792.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus 214-1] gi|312978252|ref|ZP_07789995.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus CTV-05] gi|227863034|gb|EEJ70482.1| GTPase [Lactobacillus crispatus JV-V01] gi|256614345|gb|EEU19546.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus 125-2-CHN] gi|256714239|gb|EEU29226.1| ATP-dependent protease [Lactobacillus crispatus MV-1A-US] gi|260573851|gb|EEX30407.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus MV-3A-US] gi|290921606|gb|EFD98636.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus 214-1] gi|310894771|gb|EFQ43842.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus crispatus CTV-05] Length = 196 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 102/195 (52%), Gaps = 10/195 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PK PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LNF+ + Sbjct: 11 SAVREDQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYKVNE- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYA+ +K +G +I YL R L+ + +L+D RH + Sbjct: 70 --------KFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILVDSRHEPTK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++ + + +V TK+DK+ + + + K + N H V+ SSV + Sbjct: 122 DDIAMYDYAQYLNIPILVVCTKMDKIKKSQTNKVMSGLKKKL-NLNYDHVTVLTFSSVTK 180 Query: 197 KGIEVLRKAILETIN 211 + L I + IN Sbjct: 181 LHVTELSNWIEKRIN 195 >gi|17547707|ref|NP_521109.1| GTPase EngB [Ralstonia solanacearum GMI1000] gi|24418380|sp|Q8XV43|ENGB_RALSO RecName: Full=Probable GTP-binding protein EngB gi|17430012|emb|CAD16697.1| probable gtpase protein [Ralstonia solanacearum GMI1000] Length = 234 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA +S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K P LVD+PGYGYA+ P + W L+ Y+ RS L + +++D R Sbjct: 69 ---MPAKALDPLGFLVDLPGYGYAQVPGEAKSHWEHLLGDYIQTRSQLAGLVIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-----EV 188 +D + + ++LTK DKL+ A L + ++ Y V Sbjct: 126 FTDLDCQMVEWFLPTGKPIHVLLTKADKLTNNDASRALMSARKVLAGYQAQIEGEVSLTV 185 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ + + Sbjct: 186 QLFSSLKRRGIEEAQRTVAGWL 207 >gi|116621147|ref|YP_823303.1| small GTP-binding protein [Candidatus Solibacter usitatus Ellin6076] gi|122254883|sp|Q026Q1|ENGB_SOLUE RecName: Full=Probable GTP-binding protein EngB gi|116224309|gb|ABJ83018.1| small GTP-binding protein [Candidatus Solibacter usitatus Ellin6076] Length = 191 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ + P PEIAF GRSNVGKSSLIN L K LA TSN PGRTQ +NF Sbjct: 5 KAEFVVSSGKPDTFPSDRLPEIAFLGRSNVGKSSLINALTGHKKLAFTSNTPGRTQTINF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + + LVD+PGYGYAR P + W LI YL R TL+ L++D Sbjct: 65 YRVDE---------KFYLVDLPGYGYARVPAGFAEQWKVLIEHYLEFRETLKFSCLILDT 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R G + D D+ +LD Y +V TK DKL+ + + L + E +P Sbjct: 116 RRGWMEKDLDLKRWLDHHGRPYLVVATKTDKLNQSEQERGLRAIRQ-------EGVEPLP 168 Query: 191 TSSVKRKGIEVLRKAILETI 210 S++ +G+ + +AI T+ Sbjct: 169 FSALSGRGVREIWQAITTTL 188 >gi|254524566|ref|ZP_05136621.1| GTP-binding protein [Stenotrophomonas sp. SKA14] gi|219722157|gb|EED40682.1| GTP-binding protein [Stenotrophomonas sp. SKA14] Length = 200 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 95/195 (48%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + LP E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF Sbjct: 13 SAHNVRQLPPDEGAEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIT-- 70 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P W I RY R L+ + +++D RH +K Sbjct: 71 -------PDAHLVDLPGYGYAKVPLDLQAHWQAFIDRYFRTREALKGLVVVMDIRHPLKD 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + S+ ++ + +LTK DKLS + +TL+K + + + V S R Sbjct: 124 YDRQMLSYAVQRGMPAHALLTKADKLSRSQQMQTLQKVRKELHSAYGDSVSVQVFSGEDR 183 Query: 197 KGIEVLRKAILETIN 211 G++ R I + Sbjct: 184 TGVDEARGVIGGWLG 198 >gi|332686390|ref|YP_004456164.1| GTP-binding protein EngB [Melissococcus plutonius ATCC 35311] gi|332370399|dbj|BAK21355.1| GTP-binding protein EngB [Melissococcus plutonius ATCC 35311] Length = 193 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PEIA +GRSNVGKSS IN L+NRKNLARTS PG+TQ LNF++ + Sbjct: 9 VISAVSPLQYPERELPEIALAGRSNVGKSSFINTLINRKNLARTSGKPGKTQTLNFYLIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D ++ VD+PGYGYA+ K WG +I Y++ R+ L V L+D RH Sbjct: 69 D---------SLYFVDVPGYGYAKVSKTERAKWGKMIETYITSRNQLEAVVSLVDFRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ ++ FL + +V TK+DK+ + + K + + + I SSV Sbjct: 120 TVEDKQMYDFLKYYEIPVILVATKVDKIPSSKWNKHENIIKKTLN--FDSQDKFILFSSV 177 Query: 195 KRKGIEVLRKAILETI 210 +KG E +AI + Sbjct: 178 TKKGKEEAWQAIETFL 193 >gi|149908538|ref|ZP_01897200.1| GTP-binding protein [Moritella sp. PE36] gi|149808372|gb|EDM68309.1| GTP-binding protein [Moritella sp. PE36] Length = 226 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 10/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F P+I L EIAF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 18 FRISAPDISHLTDDSGIEIAFAGRSNAGKSSALNTLTRQKSLARTSKTPGRTQLINVFEI 77 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 78 EEGK---------RLIDLPGYGFAKVPFEVKKKWQKALGEYLQKRQSLKGIVVLMDIRHP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+ + + + +LTK DKL +T+ + K ++ + V P SS Sbjct: 129 LKDLDKQLILWAVDSDIPVMALLTKADKLKQGVRSKTVREVKEAVKEF-GGDVTVAPFSS 187 Query: 194 VKRKGIEVLRKAILET 209 +K GI+VL+ + E Sbjct: 188 LKNTGIDVLKNKLCEW 203 >gi|220932326|ref|YP_002509234.1| GTP-binding protein HSR1-related [Halothermothrix orenii H 168] gi|254783200|sp|B8CY70|ENGB_HALOH RecName: Full=Probable GTP-binding protein EngB gi|219993636|gb|ACL70239.1| GTP-binding protein HSR1-related [Halothermothrix orenii H 168] Length = 199 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + P PE AFSGRSNVGKSSLIN LVNR+ LARTS+ PGRTQ +N Sbjct: 4 KNPRFVISAYDFDDFPTHNWPEFAFSGRSNVGKSSLINTLVNRRKLARTSSRPGRTQSIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYG+A P+K + WG LI YL+ R L + ++D Sbjct: 64 FFNIDDR---------FYLVDLPGYGFANVPRKVKEEWGRLIEGYLNNRPNLAGIVQIVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D + ++ + I TK+DK+S + ++ E K + + Sbjct: 115 ARHKPTRDDLMMVDWIKASGIPCLIAATKVDKISRGSRKKQEELIKKTL-VLEDFDGQFT 173 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 S+ +G + + K IL+ ++ Sbjct: 174 FFSAKTGEGKKQVGKFILDLVD 195 >gi|291563762|emb|CBL42578.1| ribosome biogenesis GTP-binding protein YsxC/EngB [butyrate-producing bacterium SS3/4] Length = 226 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 104/187 (55%), Gaps = 11/187 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PE AF+G+SNVGKSSLIN L+NRK LARTS+ PG+TQ +NF+ Sbjct: 16 STLPENTLPEFAFAGKSNVGKSSLINALMNRKALARTSSQPGKTQTINFYNIN------- 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA+ P+ WG +I YL + L+CV+LL+D RH D+ + Sbjct: 69 --GDLYYVDLPGYGYAKVPQSEKVKWGRMIENYLHKSQMLKCVFLLVDIRHEPSANDKTM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DK+ + Q+ ++ + + +IP S+ ++G E Sbjct: 127 YDWIVYNGFRPVIIATKLDKIKRSQIQKQVKLIRTGLGM--EKQDILIPFSAETKQGRED 184 Query: 202 LRKAILE 208 + I + Sbjct: 185 VWNLIDK 191 >gi|83643889|ref|YP_432324.1| GTPase [Hahella chejuensis KCTC 2396] gi|119369202|sp|Q2SN75|ENGB_HAHCH RecName: Full=Probable GTP-binding protein EngB gi|83631932|gb|ABC27899.1| predicted GTPase [Hahella chejuensis KCTC 2396] Length = 222 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 8/199 (4%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + + FL ++ P E+AF+GRSN GKSS +N + LA+TS PGRTQ Sbjct: 10 SYQSARFLMSAEQLQQCPPDVGVEVAFAGRSNAGKSSALNAITQNGKLAKTSKTPGRTQL 69 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF LVD+PGYGYA+ PK ++ W + RYL R TL + L+ Sbjct: 70 INFFTLNSE--------GCRLVDLPGYGYAKVPKAMLEKWRSNLQRYLEHRLTLNALILV 121 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +D RH + D + + + + + ++LTK DKL A+ TL++ K ++ E Sbjct: 122 MDIRHPLSPFDCSMLDWCEARDLPTLVLLTKADKLKYGPAKTTLQEVKKELKQKWRFPVE 181 Query: 188 VIPTSSVKRKGIEVLRKAI 206 SSV + G+E + Sbjct: 182 AQLFSSVSKVGVEEAHAFM 200 >gi|119470392|ref|ZP_01613120.1| GTP-binding protein [Alteromonadales bacterium TW-7] gi|119446317|gb|EAW27593.1| GTP-binding protein [Alteromonadales bacterium TW-7] Length = 225 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 9/196 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDITKLPADTGIEVAFAGRSNAGKSSALNALTDQK-LARTSKTPGRTQLINTFEL 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D N M L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADVDN-------MRLIDLPGYGFAKVPIEMKKKWQKSLGEYLQKRQSLKGIVVLMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+D+ ++ + +LTK DKL + + + + + V SS Sbjct: 125 LKDLDRDLINWAIGSEIPVLALLTKADKLKQGARKAQVLQVRRELSEL-DGDITVHAFSS 183 Query: 194 VKRKGIEVLRKAILET 209 +K G+ + K + E Sbjct: 184 LKGTGLPEVAKKLDEW 199 >gi|218509358|ref|ZP_03507236.1| GTPase EngB [Rhizobium etli Brasil 5] Length = 175 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 95/170 (55%), Positives = 121/170 (71%) Query: 42 KSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPK 101 KSSLIN LV +K LARTSN PGRTQ LN+FVP +S +LP MA+VDMPGYGYA+APK Sbjct: 1 KSSLINALVGQKGLARTSNTPGRTQELNYFVPDGYSGEGGDLPPMAIVDMPGYGYAQAPK 60 Query: 102 KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 + VD W L+ YL R+TL+ VY+LID RHG+K+ D+DV + LDK AVSYQ+VLTK DK Sbjct: 61 EQVDKWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEDVLTLLDKAAVSYQLVLTKTDK 120 Query: 162 LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + + L +T IR P A+P V+ TSS K G++ LR+AI +T+ Sbjct: 121 IKAPAVPKLLAETADKIRKRPAAYPAVLSTSSEKGDGLDDLRQAIAQTVG 170 >gi|294669759|ref|ZP_06734825.1| hypothetical protein NEIELOOT_01659 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308325|gb|EFE49568.1| hypothetical protein NEIELOOT_01659 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 210 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 98/198 (49%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP G EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLPDTG-AEIAFVGRSNAGKSSAINTLCNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + +VD+PGYGYA P+ W L+ YL R L + L++D Sbjct: 64 FFELANGH---------FMVDLPGYGYAAVPEAVRQHWVTLLGDYLQTRRQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 CRH +K +D + F K I+L+K DKLS +TL K ++ + V Sbjct: 115 CRHPLKPLDIQMLDFFAKTGRPVHILLSKADKLSKNEQIKTLSSVKKALKPFSERQDVSV 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++G+E + + Sbjct: 175 QLFSSLKKQGMEEVENVV 192 >gi|161523460|ref|YP_001578472.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans ATCC 17616] gi|189351767|ref|YP_001947395.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans ATCC 17616] gi|221213467|ref|ZP_03586442.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD1] gi|238687016|sp|A9ADM4|ENGB_BURM1 RecName: Full=Probable GTP-binding protein EngB gi|160340889|gb|ABX13975.1| GTP-binding protein HSR1-related [Burkholderia multivorans ATCC 17616] gi|189335789|dbj|BAG44859.1| GTP-binding protein [Burkholderia multivorans ATCC 17616] gi|221166919|gb|EED99390.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD1] Length = 219 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEMLLSTYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y Sbjct: 118 MMDSRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESINALRTTQKGLDAYRDQGV 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + V S++KR G++ I + Sbjct: 178 QGKLTVQLFSALKRTGLDEAHALIESWV 205 >gi|49078162|gb|AAT49757.1| PA5492 [synthetic construct] Length = 216 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ P E+AF+GRSN GKSS +N L NLARTS PGRTQ LN Sbjct: 12 QKASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLT-HANLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYGYA+ P W + YLS R++L V+L++D Sbjct: 71 FFALDDSR---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + + +++TK DKL+ A+ L K + ++ + Sbjct: 122 IRHPLTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQ 181 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 S+ KR+G++ + + + + Sbjct: 182 LFSAPKRQGVDEAQMVLAQWLG 203 >gi|116053642|ref|YP_793969.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas aeruginosa UCBPP-PA14] gi|296392357|ref|ZP_06881832.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas aeruginosa PAb1] gi|122256338|sp|Q02DL7|ENGB_PSEAB RecName: Full=Probable GTP-binding protein EngB gi|115588863|gb|ABJ14878.1| putative GTP-binding protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 215 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ P E+AF+GRSN GKSS +N L NLARTS PGRTQ LN Sbjct: 12 QKASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLT-HANLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYGYA+ P W + YLS R++L V+L++D Sbjct: 71 FFALDDSR---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + + +++TK DKL+ A+ L K + ++ + Sbjct: 122 IRHPLTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQ 181 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 S+ KR+G++ + + + + Sbjct: 182 LFSAPKRQGVDEAQMVLAQWLG 203 >gi|15600685|ref|NP_254179.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas aeruginosa PAO1] gi|107104594|ref|ZP_01368512.1| hypothetical protein PaerPA_01005673 [Pseudomonas aeruginosa PACS2] gi|254243044|ref|ZP_04936366.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|313111567|ref|ZP_07797366.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016] gi|13124210|sp|Q9HT81|ENGB_PSEAE RecName: Full=Probable GTP-binding protein EngB gi|9951827|gb|AAG08877.1|AE004962_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126196422|gb|EAZ60485.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|310883868|gb|EFQ42462.1| putative GTP-binding protein [Pseudomonas aeruginosa 39016] Length = 215 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ P E+AF+GRSN GKSS +N L NLARTS PGRTQ LN Sbjct: 12 QKASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLT-HANLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYGYA+ P W + YLS R++L V+L++D Sbjct: 71 FFALDDSR---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + + +++TK DKL+ A+ L K + ++ + Sbjct: 122 IRHPLTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVATLQ 181 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 S+ KR+G++ + + + + Sbjct: 182 LFSAPKRQGVDEAQMVLAQWLG 203 >gi|170724428|ref|YP_001758454.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella woodyi ATCC 51908] gi|169809775|gb|ACA84359.1| GTP-binding protein HSR1-related [Shewanella woodyi ATCC 51908] Length = 219 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 16/210 (7%) Query: 6 IFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 F K+ FL P+I L P EIAF+GRSN GKSS +N+L ++K LARTS Sbjct: 2 DFRKAK--FLISAPDIAHLNQYLPGDAGVEIAFAGRSNAGKSSALNMLTDQKGLARTSKT 59 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F + LVD+PGYG+A+ P W + YL ER L Sbjct: 60 PGRTQLINVFELDEHR---------RLVDLPGYGFAQVPLALKKKWQYALGEYLQERQCL 110 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V +L+D RH +K +D + + + + +LTK DK+ + + + + + + +Y Sbjct: 111 TGVVVLMDIRHPLKDLDMQMIEWAVESEIPVLALLTKADKMKQSERMKMINEVRKHLGDY 170 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V SS+K G + + E + Sbjct: 171 DD-RVKVEAFSSLKGLGKPKVLSILNEWCH 199 >gi|145356924|ref|XP_001422673.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582916|gb|ABP00990.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 253 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 12/205 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ ++ PK PEIA GRSNVGKSSL+N+L NRK+LA+TS PG+TQ +N + Sbjct: 14 FVQACVDLAGCPKPTLPEIAVIGRSNVGKSSLVNMLTNRKSLAKTSKNPGKTQTINHY-- 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA AP+ + W YL +R +L V LLID Sbjct: 72 ----RMTTGDGKFYLVDLPGYGYANAPEDLREKWAAFTREYLIKRESLITVLLLIDSTVK 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP------TTAQETLEKTKYLIRNYPTAHPE 187 +++D + +L + V +V TK+DK E +E+ + Y P Sbjct: 128 PQRLDLECLDWLGEAGVPVTVVFTKVDKRKKVGAGKRANPAENVEEFCREVSEYWDELPP 187 Query: 188 VIPTSSVKRKGIEVLRKAILETINY 212 ++ TSSV +G + I + Sbjct: 188 MLYTSSVNGEGKREVLNHIATLRQF 212 >gi|221201596|ref|ZP_03574634.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD2M] gi|221207329|ref|ZP_03580339.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD2] gi|221172917|gb|EEE05354.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD2] gi|221178412|gb|EEE10821.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia multivorans CGD2M] Length = 219 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEMLLSTYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y Sbjct: 118 MMDSRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESINALRTTQKGLDAYRDQGV 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + V S++KR G++ I + Sbjct: 178 QGKLTVQLFSALKRTGLDEAHALIESWV 205 >gi|299065446|emb|CBJ36615.1| probable GTP-binding protein engB [Ralstonia solanacearum CMR15] Length = 222 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 102/202 (50%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA +S PGRTQH+N+F Sbjct: 12 FFITVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K P LVD+PGYGYA+ P + W L+ Y+ RS L + +++D R Sbjct: 72 ---MPAKALDPLGFLVDLPGYGYAQVPGEAKSHWEHLLGDYIQTRSQLAGLVIMMDARRP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-----EV 188 +D + + ++LTK DKL+ A L + ++ Y V Sbjct: 129 FTDLDCQMVEWFLPTGKPVHVLLTKADKLTNNDASRALMSARKVLAGYREQIEGEVSLTV 188 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ + + Sbjct: 189 QLFSSLKRRGIEEAQRTVAGWL 210 >gi|225850861|ref|YP_002731095.1| ribosome biogenesis GTP-binding protein YsxC [Persephonella marina EX-H1] gi|225646661|gb|ACO04847.1| ribosome biogenesis GTP-binding protein YsxC [Persephonella marina EX-H1] Length = 203 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 12/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++ P+ PE+A GRSNVGKSSLIN + ++N+A+ S++PG+T+ +N Sbjct: 5 KKVQFIKSAVNPKDYPQPKYPEVAVVGRSNVGKSSLINAIF-KRNIAKVSSSPGKTRLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF+ D ++ VD+PGYGYA K W +I +Y R L V +L+D Sbjct: 64 FFLLNDR---------ISFVDLPGYGYAAVSKAERAKWKKMIEKYFQTRENLSLVIMLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++D + +L+ + Y +V TK DKL+ + T + + + P P V Sbjct: 115 SRHPPTKLDIMMKEWLEDLGIPYIVVATKADKLNQSEKARTKKVIRETLG-LPKDFP-VF 172 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TS+ + GI+ L +L+ + Sbjct: 173 LTSAKEGTGIKELMSYVLDFL 193 >gi|115350353|ref|YP_772192.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia ambifaria AMMD] gi|170700725|ref|ZP_02891720.1| GTP-binding protein HSR1-related [Burkholderia ambifaria IOP40-10] gi|122324237|sp|Q0BJ15|ENGB_BURCM RecName: Full=Probable GTP-binding protein EngB gi|115280341|gb|ABI85858.1| cell division checkpoint GTPase YihA [Burkholderia ambifaria AMMD] gi|170134395|gb|EDT02728.1| GTP-binding protein HSR1-related [Burkholderia ambifaria IOP40-10] Length = 219 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y Sbjct: 118 MMDSRRPLTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESINALRNTQKGLDAYRDQGV 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + V S++KR G++ + I + Sbjct: 178 KGKLTVQLFSALKRTGLDEAHELIESWL 205 >gi|152988688|ref|YP_001351602.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas aeruginosa PA7] gi|166225968|sp|A6VEW7|ENGB_PSEA7 RecName: Full=Probable GTP-binding protein EngB gi|150963846|gb|ABR85871.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 215 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ P E+AF+GRSN GKSS +N L NLARTS PGRTQ LN Sbjct: 12 QKASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLT-HANLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + LVD+PGYGYA+ P W + YLS R +L V+L++D Sbjct: 71 FFSLDESR---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRESLAGVFLMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + + +++TK DKL+ A+ L K + ++ + Sbjct: 122 IRHPLTDFDRLMLDWAQASQLPIHVLMTKADKLAFGAAKNALLKVRREVQQGWGDVASLQ 181 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 S+ KR+G++ + + + + Sbjct: 182 LFSAPKRQGVDEAQMVLAQWLG 203 >gi|148266199|ref|YP_001232905.1| ribosome biogenesis GTP-binding protein YsxC [Geobacter uraniireducens Rf4] gi|189037180|sp|A5G964|ENGB_GEOUR RecName: Full=Probable GTP-binding protein EngB gi|146399699|gb|ABQ28332.1| small GTP-binding protein [Geobacter uraniireducens Rf4] Length = 204 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 102/194 (52%), Gaps = 12/194 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P PEIAF+GRSNVGKSSLIN+LVNRK+L RTS+ PGRTQ +NFF Sbjct: 8 FIKSATRPAHYPAGDFPEIAFAGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFDV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYG+AR P WG ++ YLS+RS LR V L++D R Sbjct: 68 N---------GEFTLVDLPGYGFARVPLAVKKEWGPMMETYLSKRSNLRGVILILDIRRT 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + +L +V IV+TK DK+S + I E+ S+ Sbjct: 119 PVAEDVQMLHWLRAYSVKPIIVVTKCDKVSKNERAKQAAVIAQTI---GIQMAELNFFSA 175 Query: 194 VKRKGIEVLRKAIL 207 + ++G + + + I Sbjct: 176 LSKEGKDQIWQRIE 189 >gi|107024272|ref|YP_622599.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia cenocepacia AU 1054] gi|116688403|ref|YP_834026.1| GTPase EngB [Burkholderia cenocepacia HI2424] gi|170731713|ref|YP_001763660.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia cenocepacia MC0-3] gi|206558672|ref|YP_002229432.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia cenocepacia J2315] gi|254246572|ref|ZP_04939893.1| GTP-binding protein, HSR1-related [Burkholderia cenocepacia PC184] gi|119368795|sp|Q1BRX9|ENGB_BURCA RecName: Full=Probable GTP-binding protein EngB gi|166225945|sp|A0K3Q6|ENGB_BURCH RecName: Full=Probable GTP-binding protein EngB gi|238688582|sp|B1JU53|ENGB_BURCC RecName: Full=Probable GTP-binding protein EngB gi|238693064|sp|B4E5Y9|ENGB_BURCJ RecName: Full=Probable GTP-binding protein EngB gi|105894461|gb|ABF77626.1| cell division checkpoint GTPase YihA [Burkholderia cenocepacia AU 1054] gi|116646492|gb|ABK07133.1| cell division checkpoint GTPase YihA [Burkholderia cenocepacia HI2424] gi|124871348|gb|EAY63064.1| GTP-binding protein, HSR1-related [Burkholderia cenocepacia PC184] gi|169814955|gb|ACA89538.1| GTP-binding protein HSR1-related [Burkholderia cenocepacia MC0-3] gi|198034709|emb|CAR50576.1| putative GTP-binding cell division protein EngB [Burkholderia cenocepacia J2315] Length = 219 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y Sbjct: 118 MMDSRRPLTDLDRRMIEWFAPTGKPIHTLLTKCDKLTRQESINALRNTQKGLDAYRDQGV 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + V S++KR G++ + I + Sbjct: 178 KGKLTVQLFSALKRTGLDEAHELIESWL 205 >gi|134294474|ref|YP_001118209.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia vietnamiensis G4] gi|166225947|sp|A4JAS1|ENGB_BURVG RecName: Full=Probable GTP-binding protein EngB gi|134137631|gb|ABO53374.1| cell division checkpoint GTPase YihA [Burkholderia vietnamiensis G4] Length = 219 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y Sbjct: 118 MMDSRRPLTDLDRRMIEWFAPTGKPIHTLLTKCDKLTRQESINALRNTQKGLDAYRDQGV 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + V S++KR G++ + I + Sbjct: 178 KGKLTVQLFSALKRTGLDEAHELIESWL 205 >gi|325679699|ref|ZP_08159273.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 8] gi|324108514|gb|EGC02756.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcus albus 8] Length = 242 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 109/203 (53%), Gaps = 15/203 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ F+ + +PK+ PE AFSGRSNVGKSSLIN + NRKN+AR S+ PG+T Sbjct: 6 FNKAE--FVTSYGKFSQIPKSDRPEFAFSGRSNVGKSSLINKIFNRKNMARVSSVPGKTV 63 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST-LRCVY 125 +NFF +D + VD+PGYGYA K WG LI YL + + V+ Sbjct: 64 TINFFSVED----------VYFVDLPGYGYANVSKAEKGKWGELIGGYLGDFERYVEIVF 113 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LID RH + D + ++L + + IVLTK DKL PT + + I + H Sbjct: 114 QLIDMRHAPSKDDIQMINYLIDNEMPFVIVLTKADKLKPTARKARMAAFAEEIPCFEDIH 173 Query: 186 PEVIPTSSVKRKGIEVLRKAILE 208 IP S+V +G++ L+ I E Sbjct: 174 --CIPFSAVTGEGVDELKAVIEE 194 >gi|172059372|ref|YP_001807024.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia ambifaria MC40-6] gi|238689153|sp|B1YRR0|ENGB_BURA4 RecName: Full=Probable GTP-binding protein EngB gi|171991889|gb|ACB62808.1| GTP-binding protein HSR1-related [Burkholderia ambifaria MC40-6] Length = 219 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y Sbjct: 118 MMDSRRPLTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESINALRNTQKGLDAYREQGV 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + V S++KR G++ + I + Sbjct: 178 KGKLTVQLFSALKRTGLDEAHELIESWV 205 >gi|81428670|ref|YP_395670.1| GTPase EngB [Lactobacillus sakei subsp. sakei 23K] gi|119369209|sp|Q38WS0|ENGB_LACSS RecName: Full=Probable GTP-binding protein EngB gi|78610312|emb|CAI55361.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K] Length = 199 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 99/197 (50%), Gaps = 11/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P PEIA SGRSNVGKSSLIN L+NRK+ ARTS+ PG+TQ LNF+ Sbjct: 9 VMSAVAASQYPTDQLPEIALSGRSNVGKSSLINKLINRKSYARTSSKPGKTQTLNFYRV- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + VD+PGYGYA+ KK + +G +I YL+ R LR + LID RH Sbjct: 68 --------ENELYFVDVPGYGYAKVSKKQREKFGQIIEAYLTNRDNLRGLISLIDGRHEP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D ++ F + +V TK+DK+S + K + P + + S++ Sbjct: 120 TDDDIAMYVFAKYYDIPVLVVATKMDKISTGKWNRQEKIIKEALDFNPV--DKFVCFSAL 177 Query: 195 KRKGIEVLRKAILETIN 211 G + + + I + + Sbjct: 178 TGAGKDTVWEWIEQQCD 194 >gi|187776854|ref|ZP_02993327.1| hypothetical protein CLOSPO_00393 [Clostridium sporogenes ATCC 15579] gi|187775513|gb|EDU39315.1| hypothetical protein CLOSPO_00393 [Clostridium sporogenes ATCC 15579] Length = 199 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + P+ G PEIAF GRSNVGKS+LIN L NR+ L + S+ PG+T+ +N Sbjct: 11 KKAEFVISAVKKAQYPEDGRPEIAFVGRSNVGKSTLINTLTNRRKLVKVSSTPGKTRLIN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF+ + M VD+PGYGYA+ KK ++WG ++ +YL ER L+ + LL+D Sbjct: 71 FFLINE---------NMYFVDLPGYGYAKVSKKEKENWGYIMEQYLVERDQLKKIVLLVD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D ++++++ +V TK+DKL + + + ++ +++ Sbjct: 122 SRHKPTSDDINMYNWIKHYNYEVLVVGTKLDKLKRNDINKNKKIIRDTLKM--DKDDKIL 179 Query: 190 PTSSVKRKGIEVLRKAIL 207 SS+ ++G E + + IL Sbjct: 180 LISSLNKEGKEEVLEQIL 197 >gi|295692730|ref|YP_003601340.1| GTP-binding protein engb [Lactobacillus crispatus ST1] gi|295030836|emb|CBL50315.1| Probable GTP-binding protein engB [Lactobacillus crispatus ST1] Length = 196 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 102/195 (52%), Gaps = 10/195 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PK PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LNF+ + Sbjct: 11 SAVREDQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYKVNE- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYA+ +K +G +I YL R L+ + +L+D RH + Sbjct: 70 --------KFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRPNLKGLIILVDSRHEPTK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++ + + +V TK+DK+ + + + K + N H V+ SSV + Sbjct: 122 DDIAMYDYAQYLNIPILVVCTKMDKIKKSQTNKVMSGLKKKL-NLNYDHVTVLTFSSVTK 180 Query: 197 KGIEVLRKAILETIN 211 + L I + IN Sbjct: 181 LHVTELSNWIEKRIN 195 >gi|210615411|ref|ZP_03290538.1| hypothetical protein CLONEX_02754 [Clostridium nexile DSM 1787] gi|210150260|gb|EEA81269.1| hypothetical protein CLONEX_02754 [Clostridium nexile DSM 1787] Length = 205 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 74/187 (39%), Positives = 109/187 (58%), Gaps = 11/187 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ EIAF+G+SNVGKSSLIN L+NRK+ ARTS PG+TQ +NF+ D Sbjct: 21 SKLPETDKVEIAFAGKSNVGKSSLINALMNRKSFARTSATPGKTQTINFYNINDI----- 75 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA+ +K WG LI RYL L+ V+LLID RH D+ + Sbjct: 76 ----MYLVDLPGYGYAKVSEKEKIQWGKLIERYLHSSKQLKAVFLLIDIRHDPSANDKMM 131 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + I+ TK+DKL + + ++ K + P ++IP SSV ++G E Sbjct: 132 YEWIVSQGYNPIIIATKLDKLKRSQVAKHVKMIKQGLDLVPGT--QIIPFSSVSKQGREE 189 Query: 202 LRKAILE 208 + + + + Sbjct: 190 IWELVEK 196 >gi|315924141|ref|ZP_07920367.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoramibacter alactolyticus ATCC 23263] gi|315622543|gb|EFV02498.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoramibacter alactolyticus ATCC 23263] Length = 212 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 12/196 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ PE+ GRSNVGKSS +N L+ R+NLARTS+ PG+TQ +NF+ Sbjct: 9 IISAVSSKQYPQDHLPELVLLGRSNVGKSSFVNTLIRRRNLARTSSQPGKTQTMNFYQIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D VDMPGYGYAR KK+ + WG +I YL +R L V+LL+D RH Sbjct: 69 DL---------FRFVDMPGYGYARVSKKSREKWGAMIETYLQKRENLAGVFLLVDSRHEP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ +F++L + +V+TK DKL+ ++ L + +VIP SSV Sbjct: 120 SEDDELMFNWLTYYGLVPMVVMTKFDKLNAMRKRKALNNI---AATFHLPTKDVIPFSSV 176 Query: 195 KRKGIEVLRKAILETI 210 ++ G + + I + Sbjct: 177 EKDGYDTAWERIETAL 192 >gi|224095021|ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|222853234|gb|EEE90781.1| predicted protein [Populus trichocarpa] Length = 302 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 99/202 (49%), Gaps = 12/202 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P+ PE A GRSNVGKSSLIN+L +K +A TS PG+TQ +N F+ Sbjct: 107 FVKSSGRAKDCPRDDRPEFAILGRSNVGKSSLINVLARKKEVALTSKKPGKTQLINHFLV 166 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A+AP W Y R TL V LLID Sbjct: 167 N---------KSWYLVDLPGYGFAKAPDSARMDWSSFTKGYFLNRETLVAVLLLIDASVP 217 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA---QETLEKTKYLIRNYPTAHPEVIP 190 ++ID D ++L + + +V TK DK+ E ++ + L+R HP I Sbjct: 218 PQKIDLDCANWLGRNNIPMTLVFTKCDKMKGGKRTRPDENIKNFQELMRQNYREHPAWIM 277 Query: 191 TSSVKRKGIEVLRKAILETINY 212 TSSV G + L + + NY Sbjct: 278 TSSVTGLGRDELLLHMSQLRNY 299 >gi|171318379|ref|ZP_02907537.1| GTP-binding protein HSR1-related [Burkholderia ambifaria MEX-5] gi|171096457|gb|EDT41356.1| GTP-binding protein HSR1-related [Burkholderia ambifaria MEX-5] Length = 219 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y Sbjct: 118 MMDSRRPLTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESINALRNTQKGLDAYRDQGV 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + V S++KR G++ + I + Sbjct: 178 KGKLTVQLFSALKRTGLDEAHELIESWV 205 >gi|56476001|ref|YP_157590.1| ribosome biogenesis GTP-binding protein YsxC [Aromatoleum aromaticum EbN1] gi|81598986|sp|Q5P7M2|ENGB_AROAE RecName: Full=Probable GTP-binding protein EngB gi|56312044|emb|CAI06689.1| GTP-binding protein [Aromatoleum aromaticum EbN1] Length = 216 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 99/207 (47%), Gaps = 12/207 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 IF + F + + G LP EIAF+GRSN GKSS IN L + LA S PGR Sbjct: 2 PIFRNA--RFEVSIAKSGALPPPEGAEIAFAGRSNAGKSSAINTLADHTRLAFVSKTPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +NFF LVD+PGYGYA+ P+ W GL+ YL +R L + Sbjct: 60 TQLINFFRLD---------CGAVLVDLPGYGYAKVPENIRRQWQGLLEHYLRKRENLIGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D RH + +D+ + + ++LTK DKLS A TL + + Sbjct: 111 VLIMDSRHPLTPLDRQMIDWFVPGGRPIHVLLTKCDKLSRNEAAATLASVRREVAAL-GP 169 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETIN 211 V SS+K+ G+E + + + Sbjct: 170 QISVQLFSSLKKIGMEEVEHKVAGWLG 196 >gi|293401437|ref|ZP_06645580.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305075|gb|EFE46321.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 196 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 13/201 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ + P+ P+ PEI +GRSNVGKSS IN + RK LA N PG+T+ Sbjct: 4 FQKAELV--ISAPDKKSWPETDLPEIVLAGRSNVGKSSFINTMCGRKKLAYVGNTPGKTR 61 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNFF D VD+PGYGYA K + +G ++ Y +ER + + + Sbjct: 62 LLNFFNLDD---------KYMFVDVPGYGYANISKAQLLKFGEMMEDYFAERKQKKGLVI 112 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH + D + F + +V TK DKL T + L+ + ++ H Sbjct: 113 LVDARHKPTEDDITMLEFARYYEIPVAVVATKTDKLPSTKLKNQLKMIRKELQ--LNDHE 170 Query: 187 EVIPTSSVKRKGIEVLRKAIL 207 + P S+ K+ G+E + + ++ Sbjct: 171 PLFPFSAEKKTGMEAVWEYLI 191 >gi|254253489|ref|ZP_04946807.1| GTP-binding protein [Burkholderia dolosa AUO158] gi|124896098|gb|EAY69978.1| GTP-binding protein [Burkholderia dolosa AUO158] Length = 219 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 100/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y Sbjct: 118 MMDSRRPLTDLDRRMIEWFAPTGKPIHTLLTKCDKLTRQESINALRTTQKGLDAYRDQGV 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + V S++KR G++ I + Sbjct: 178 QGKLTVQLFSALKRTGLDEAHALIESWV 205 >gi|239623660|ref|ZP_04666691.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521691|gb|EEQ61557.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 193 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 11/186 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P+ PE AFSG+SNVGKSSLIN L+NRK+ ARTS+ PG+TQ +NF+ Sbjct: 16 SKMPENILPEFAFSGKSNVGKSSLINALMNRKSYARTSSQPGKTQTINFYNIN------- 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 A+ VD+PGYGYA+ + + WG +I RYL + L+ V+LLID RH D+ + Sbjct: 69 --GALYYVDLPGYGYAKVALEAKEKWGKMIERYLRNSAMLKMVFLLIDIRHEPSANDRMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ ++ TK+DK++ + Q+ ++ + + +IP S+ ++G + Sbjct: 127 YEWIIYNGYHPVVIATKLDKINRSQVQKHVKMIREGLGMEKDGI--IIPFSAETKQGRDE 184 Query: 202 LRKAIL 207 + I Sbjct: 185 IWDLIE 190 >gi|329897111|ref|ZP_08271856.1| GTP-binding protein EngB [gamma proteobacterium IMCC3088] gi|328921435|gb|EGG28824.1| GTP-binding protein EngB [gamma proteobacterium IMCC3088] Length = 211 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + P E+AF+GRSN GKSS IN L K LARTS PGRTQ LNFF Sbjct: 20 FLASAAKFHQCPADLGWEVAFAGRSNAGKSSAINSLTKNKKLARTSKTPGRTQLLNFFSL 79 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A+ P +W + YL ER++L+ + LL+D RH Sbjct: 80 SE---------QQRLVDLPGYGFAKVPVAMKKAWTEQLETYLQERASLKGLILLMDIRHP 130 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D+ + ++ + I+LTK DKL Q T + + +++ V SS Sbjct: 131 LQPFDEQLINWALSADMPCHILLTKADKLKRGPQQSTKLQVEKVLKPR-GGKITVQTFSS 189 Query: 194 VKRKGIEVLRKAILETI 210 +K +G E L + E + Sbjct: 190 LKHQGHEALIAKLDEWL 206 >gi|190575834|ref|YP_001973679.1| ribosome biogenesis GTP-binding protein YsxC [Stenotrophomonas maltophilia K279a] gi|229463763|sp|B2FTY5|ENGB_STRMK RecName: Full=Probable GTP-binding protein EngB gi|190013756|emb|CAQ47391.1| putative ATP/GTP binding protein [Stenotrophomonas maltophilia K279a] Length = 200 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 96/195 (49%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + LP E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF Sbjct: 13 SAHNVRQLPPDEGAEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQVT-- 70 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P W I +Y R L+ + +++D RH +K Sbjct: 71 -------PEAHLVDLPGYGYAKVPLDLQAHWQAFIDKYFRTREALKGLVVVMDIRHPLKD 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + S+ ++ + +LTK DKLS + ++L+K + +++ V S R Sbjct: 124 YDRQMLSYAVQRGLPAHALLTKADKLSRSQQMQSLQKVRKELQSAYGDSVSVQVFSGEDR 183 Query: 197 KGIEVLRKAILETIN 211 G++ R I + Sbjct: 184 TGVDEARGVIGGWLG 198 >gi|126643102|ref|YP_001086086.1| ribosome biogenesis GTP-binding protein YsxC [Acinetobacter baumannii ATCC 17978] gi|166225936|sp|A3M990|ENGB_ACIBT RecName: Full=Probable GTP-binding protein EngB Length = 211 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P++ L + EIAF+GRSN GKSS IN L N+K LAR S PGRTQ +NFF + Sbjct: 1 MSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSLGN 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 P LVD+PGYGYA P+ W + YL R +L+ + LL+D RH ++ Sbjct: 61 --------PDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHPLQ 112 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + + + I+LTK DKL+ A + L + K ++ + SS+ Sbjct: 113 HFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDF-SIQLFSSLN 171 Query: 196 RKGIEVLRKAILETINY 212 + G+E L + +++ Sbjct: 172 KLGLEELASVMAGRLHF 188 >gi|167628601|ref|YP_001679100.1| GTP-binding protein [Heliobacterium modesticaldum Ice1] gi|238687891|sp|B0TFJ0|ENGB_HELMI RecName: Full=Probable GTP-binding protein EngB gi|167591341|gb|ABZ83089.1| GTP-binding protein [Heliobacterium modesticaldum Ice1] Length = 205 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 15/203 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + P+ PE+A GRSNVGKSSLIN L NR++LARTS+ PG+TQ LN Sbjct: 4 KEAEFVISAVKGEQYPEDNLPEVALVGRSNVGKSSLINKLCNRRHLARTSSTPGKTQTLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + +VD+PGYGYA K SWG ++ YL +R LR V L+D Sbjct: 64 FYRINQAA---------YIVDLPGYGYASVSKTQRASWGPMMEHYLKKRLQLRGVIQLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D + +L+ + ++ TK DK++ + +++ + + P P +I Sbjct: 115 IRHPPTKDDIAMREWLNHFKIGAAVIATKADKINRGRYAKHVKQIRQDLA-IPKEIP-II 172 Query: 190 PTSSVKRKGIEVLRKAILETINY 212 S+ G E +L+ ++Y Sbjct: 173 VFSAETGHGKED----VLDLLDY 191 >gi|225028674|ref|ZP_03717866.1| hypothetical protein EUBHAL_02953 [Eubacterium hallii DSM 3353] gi|224953984|gb|EEG35193.1| hypothetical protein EUBHAL_02953 [Eubacterium hallii DSM 3353] Length = 197 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 75/188 (39%), Positives = 106/188 (56%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LPK PE+AF+G+SNVGKSSLIN LVNRK+LARTS PG+TQ +NF+ + Sbjct: 16 SKLPKNTLPEVAFAGKSNVGKSSLINALVNRKSLARTSGQPGKTQTINFYNVNE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M +VD+PGYGYA+ K+ WG +I YL LR V+LLID RH D + Sbjct: 70 ---EMYIVDLPGYGYAKVSKEVAAKWGPMIENYLHTSEQLRMVFLLIDLRHKPTNNDVQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ S IV TK DK+ + Q+ L+ K ++ ++P S+V + G + Sbjct: 127 YRWILSNGFSPVIVATKADKIKRSQLQKQLKLLKDTLK--VIEGVPIVPFSAVTKAGRDE 184 Query: 202 LRKAILET 209 + + I E Sbjct: 185 IWELIEEY 192 >gi|325928435|ref|ZP_08189626.1| cell division checkpoint GTPase YihA [Xanthomonas perforans 91-118] gi|119369279|sp|Q3BXK1|ENGB_XANC5 RecName: Full=Probable GTP-binding protein EngB gi|325541152|gb|EGD12703.1| cell division checkpoint GTPase YihA [Xanthomonas perforans 91-118] Length = 207 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 13 SAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ-- 70 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K Sbjct: 71 -------PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKD 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + ++ + +LTK DKL +TL+K K + + V S R Sbjct: 124 YDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESR 183 Query: 197 KGIEVLRKAILETIN 211 +G++ LR + + Sbjct: 184 QGVDELRAIVGAWLG 198 >gi|78046337|ref|YP_362512.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034767|emb|CAJ22412.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 221 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 27 SAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ-- 84 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K Sbjct: 85 -------PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKD 137 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + ++ + +LTK DKL +TL+K K + + V S R Sbjct: 138 YDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESR 197 Query: 197 KGIEVLRKAILETIN 211 +G++ LR + + Sbjct: 198 QGVDELRAIVGAWLG 212 >gi|95931072|ref|ZP_01313799.1| GTP-binding [Desulfuromonas acetoxidans DSM 684] gi|95132881|gb|EAT14553.1| GTP-binding [Desulfuromonas acetoxidans DSM 684] Length = 202 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 12/198 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++ G P A PEIAF+GRSNVGKSSL+N++V RK+L RTS+ PGRTQ +N Sbjct: 4 KTAQFVKSATRPGNYPPAERPEIAFAGRSNVGKSSLLNVMVQRKSLVRTSSTPGRTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + + LVD+PGYG+A+ P WG +I YL R +L V +L D Sbjct: 64 FFDLNE---------EIYLVDLPGYGFAKVPMAVKKQWGPMIQTYLQSRQSLCAVVVLFD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R ++ D + +L++ V V+TK+DK+S + A Sbjct: 115 IRRVPREEDLQLLDWLEEYEVPTIPVITKVDKVSRNRRAAQIAPIAEATGLPAEAFS--- 171 Query: 190 PTSSVKRKGIEVLRKAIL 207 S++ ++G + + + + Sbjct: 172 LFSALTKEGRDEIWERLE 189 >gi|71278006|ref|YP_267050.1| ribosome biogenesis GTP-binding protein YsxC [Colwellia psychrerythraea 34H] gi|119369187|sp|Q48A63|ENGB_COLP3 RecName: Full=Probable GTP-binding protein EngB gi|71143746|gb|AAZ24219.1| putative GTP-binding protein [Colwellia psychrerythraea 34H] Length = 224 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 101/203 (49%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 TK+A F P+I LP E+AF+GRSN GKSS +N L N++ LAR S PGRTQ Sbjct: 9 TKAA--FTISAPDIRRLPADSGIEVAFAGRSNAGKSSALNTLTNQRGLARISKTPGRTQL 66 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +N F + L+D+PGYG+A+ P W + YL +R L+ + +L Sbjct: 67 INVFEVAENR---------RLIDLPGYGFAQVPLAMKKKWQKALGEYLEKRQCLKGLVVL 117 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +D RH +K +D D+ + + +LTK DKLS + K + + A + Sbjct: 118 MDIRHPLKDLDMDLIQWAADSDLPVLALLTKCDKLSQGKRSSEVLAVKKALSSL-NADIQ 176 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V SS+K G E I + + Sbjct: 177 VQAFSSLKYTGKEQADAIICQWL 199 >gi|160878538|ref|YP_001557506.1| GTP-binding protein HSR1-related [Clostridium phytofermentans ISDg] gi|189037174|sp|A9KHA0|ENGB_CLOPH RecName: Full=Probable GTP-binding protein EngB gi|160427204|gb|ABX40767.1| GTP-binding protein HSR1-related [Clostridium phytofermentans ISDg] Length = 201 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 112/189 (59%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +LP+ PE AF+G+SNVGKSSLIN L+NRK+ ARTS+ PG+TQ +NF+ + Sbjct: 16 SVLPENTQPEFAFAGKSNVGKSSLINGLMNRKSFARTSSQPGKTQTINFYHLNE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA+ + WG +I +YL + L+ ++LLID RH D+D+ Sbjct: 70 ---KLYFVDLPGYGYAKVSSELKAKWGKMIEKYLRTSTQLKVIFLLIDIRHEPSANDKDM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DK++ + + ++ + + A+ +++P SS+ ++G + Sbjct: 127 YEWIVHNGFEPVIIATKLDKINRSQRDKHIKMVRTGL--CAGANTKILPFSSLSKEGKDD 184 Query: 202 LRKAILETI 210 + + I + + Sbjct: 185 IWRCIEQFL 193 >gi|326796700|ref|YP_004314520.1| GTP-binding protein engB [Marinomonas mediterranea MMB-1] gi|326547464|gb|ADZ92684.1| GTP-binding protein engB [Marinomonas mediterranea MMB-1] Length = 212 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F++ ++ P E+AF+GRSN GKS+ +N L N++ LARTS PGRTQ +N Sbjct: 9 QSAHFIKSAEKLSQCPVDQGLEVAFAGRSNAGKSTALNTLTNQRKLARTSKTPGRTQLIN 68 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + L+D+PGYG+A+ P +W + YL R +L V L++D Sbjct: 69 CFGMN--------VEDRRLIDLPGYGFAKVPVAMKINWQKHMQDYLMNRRSLVGVVLVMD 120 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K+ D + + V ++LTK DKL A+ + K ++ V Sbjct: 121 VRHPLKEFDVMMLDWAKSNKVQVHVLLTKSDKLKRGPAKSAALQVKKYMKE-NEVIGSVQ 179 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S++K G++ LR + E + Sbjct: 180 NFSALKNDGVDTLRLKLAEWL 200 >gi|330806701|ref|YP_004351163.1| GTP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|253559452|gb|ACT32413.1| putative GTP-binding protein EngB [Pseudomonas fluorescens] gi|327374809|gb|AEA66159.1| Putative GTP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 213 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFK 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDDER---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDAITIQLFS 184 Query: 193 SVKRKGIEVLRKAILETI 210 + KR G+E + + + Sbjct: 185 APKRMGLEEAYTVLADWM 202 >gi|30250379|ref|NP_842449.1| GTPase EngB [Nitrosomonas europaea ATCC 19718] gi|81584537|sp|Q82S94|ENGB_NITEU RecName: Full=Probable GTP-binding protein EngB gi|30181174|emb|CAD86370.1| putative GTP-binding protein [Nitrosomonas europaea ATCC 19718] Length = 222 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 109/211 (51%), Gaps = 14/211 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 ++H +F + F V + LP+ E+AF+GRSN GKSS IN LV R+ A S Sbjct: 1 MTHPLFRHAE--FYTTVNRLQDLPQTAGVEVAFAGRSNAGKSSAINTLVGRERFAFVSKT 58 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQH+NFF + +VD+PGYGYA+ P WG L+ YL R +L Sbjct: 59 PGRTQHINFFQLGEER---------FMVDLPGYGYAQVPLAIRQHWGHLLSSYLQTRQSL 109 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-N 180 + L++D RH + ++D + + + ++LTK DKLS + A L + + + N Sbjct: 110 YGMILIMDIRHPLTKLDLQMLDWFRQTKKPVHVLLTKADKLSKSRALVALNEVRQFLTVN 169 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 YP H V SS+K G+E + + + Sbjct: 170 YP--HCTVQTFSSLKVAGVEEASQLLQNWFD 198 >gi|170724261|ref|YP_001751949.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas putida W619] gi|229463764|sp|B1JFJ3|ENGB_PSEPW RecName: Full=Probable GTP-binding protein EngB gi|169762264|gb|ACA75580.1| small GTP-binding protein [Pseudomonas putida W619] Length = 210 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 95/201 (47%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LN Sbjct: 12 QKATFALSAAKVEQCPDDQGYEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYGYA+ P W + YL R LR V L++D Sbjct: 71 FFSLDDER---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRECLRGVILMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + + I+LTK DKL+ + TL K + IR + Sbjct: 122 VRHPMTDFDKMMLDWARASGMPMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQ 181 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ KR G+E K + + Sbjct: 182 LFSAPKRLGLEEAYKVLAGWM 202 >gi|325265778|ref|ZP_08132465.1| ribosome biogenesis GTP-binding protein YsxC [Kingella denitrificans ATCC 33394] gi|324982761|gb|EGC18386.1| ribosome biogenesis GTP-binding protein YsxC [Kingella denitrificans ATCC 33394] Length = 220 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 71/204 (34%), Positives = 100/204 (49%), Gaps = 11/204 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 HNAKFFTTVNHLKDLPDTA-AEIAFVGRSNAGKSSAINALCNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + +VD+PGYGYA+ P+ W L+ YL R +L + L++D Sbjct: 64 FFELSNGH---------FMVDLPGYGYAQVPEAIRAHWVKLLGDYLQTRPSLLGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K +D + F + I+L+K DKLS +TL K ++ + V Sbjct: 115 IRHPLKPLDIQMLDFFAQTERPVHILLSKADKLSKNEQIKTLSSVKKALKPFTERQTVTV 174 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 SS+K++GIE + + ++ Sbjct: 175 QLFSSLKKQGIEEVEHIVQSWFDH 198 >gi|163815262|ref|ZP_02206639.1| hypothetical protein COPEUT_01422 [Coprococcus eutactus ATCC 27759] gi|158449457|gb|EDP26452.1| hypothetical protein COPEUT_01422 [Coprococcus eutactus ATCC 27759] Length = 206 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 11/186 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PEIAF+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +NF+ Sbjct: 16 SKLPDNELPEIAFAGKSNVGKSSLINGLLNRKSLARTSAQPGKTQTINFYNIN------- 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA+ + WG +I YL + L+ V+LLID RH + D + Sbjct: 69 --KELYFVDLPGYGYAKVSVEIRAKWGKMIENYLHTSAQLKKVFLLIDIRHVPSENDCLM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DK+ + Q+ L++ K + P +IP S++ ++G + Sbjct: 127 YDWIVNNGYEPVIICTKLDKIKRSQVQKNLKQIKEKLGLVPGT--RMIPFSALTKQGKDD 184 Query: 202 LRKAIL 207 + I Sbjct: 185 IWNLIE 190 >gi|170743187|ref|YP_001771842.1| ribosome biogenesis GTP-binding protein YsxC [Methylobacterium sp. 4-46] gi|168197461|gb|ACA19408.1| GTP-binding protein HSR1-related [Methylobacterium sp. 4-46] Length = 216 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 95/205 (46%), Positives = 113/205 (55%), Gaps = 10/205 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F A F + LP EIAF+GRSNVGKSSLIN L R LARTS+ PGRT Sbjct: 18 LFAGPA-DFATASDTLAGLPPMRGLEIAFAGRSNVGKSSLINALTGRNTLARTSHTPGRT 76 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNFF + LVDMPGYGYA K V SW LI YL R+ L VY Sbjct: 77 QQLNFFDLG---------GKLTLVDMPGYGYAAVSKAKVASWTELIHAYLQGRANLARVY 127 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG+K D +V LD AVSYQ+VLTK D L L+ T + P A+ Sbjct: 128 VLIDARHGIKPNDGEVLDELDAAAVSYQVVLTKGDDLKKGEVASRLDATAAALARRPAAY 187 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 PE+I TSS +GI LR ++ + Sbjct: 188 PEIILTSSRTGEGIPALRASVARLL 212 >gi|93005116|ref|YP_579553.1| GTPase EngB [Psychrobacter cryohalolentis K5] gi|92392794|gb|ABE74069.1| cell division checkpoint GTPase YihA [Psychrobacter cryohalolentis K5] Length = 256 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 9/199 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P L P E+AF+GRSN GKSS IN L N++ LAR+S PGRTQ +NFF Sbjct: 28 FMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQMINFFNV 87 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P + W + YL RS+L + L+ D RH Sbjct: 88 GDADR--------RLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMSDIRHP 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + I+LTK DKL ++ L T+ ++ + + S+ Sbjct: 140 LKFFDEQMLRWAKDGELPVHILLTKADKLKYGASKNALLNTRKRLKEL-GLNCSIQLFSA 198 Query: 194 VKRKGIEVLRKAILETINY 212 ++++G++ L + Y Sbjct: 199 LRKEGLDELAGVMGNWYEY 217 >gi|15895894|ref|NP_349243.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium acetobutylicum ATCC 824] gi|24418388|sp|Q97FU0|ENGB_CLOAB RecName: Full=Probable GTP-binding protein EngB gi|15025663|gb|AAK80583.1|AE007761_2 Predicted GTPase, YSXC B.subtilis ortholog [Clostridium acetobutylicum ATCC 824] gi|325510046|gb|ADZ21682.1| GTPase EngB [Clostridium acetobutylicum EA 2018] Length = 200 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 11/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P G EIAF GRSNVGKSSLIN + NR+ L + S PG+T+ +NFF+ Sbjct: 8 FIISAAWKKQFPIDGKDEIAFVGRSNVGKSSLINAITNRRKLVKVSGTPGKTRLVNFFMI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA+ KK ++ W I YL R L+ V LL+D RH Sbjct: 68 NN---------DFYFVDLPGYGYAKVSKKELEKWSQTIEGYLVGREQLKKVILLVDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D +++++ ++ TK DK+ + + + K ++ E SS Sbjct: 119 PTKDDITMYNWIKYYDYKCIVIATKSDKIKRSEKVKNEKLIKETLK--FNDSDEFYFFSS 176 Query: 194 VKRKGIEVLRKAILETINY 212 ++G + L I INY Sbjct: 177 ATKQGRDELINNICSGINY 195 >gi|255008962|ref|ZP_05281088.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides fragilis 3_1_12] gi|313146704|ref|ZP_07808897.1| GTPase EngB [Bacteroides fragilis 3_1_12] gi|313135471|gb|EFR52831.1| GTPase EngB [Bacteroides fragilis 3_1_12] Length = 201 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N F+ Sbjct: 8 FVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTMLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYAR +K + +I Y+ ER + +++LID R Sbjct: 68 NN---------SWYLVDLPGYGYARRGQKGQEQIRTIIEDYILEREQMTNLFVLIDSRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + +L + + + I+ TK DKL + + +R P TSS Sbjct: 119 PQKIDIEFMEWLGENGIPFSIIFTKADKLKGGRLKMNINAYLKELRKQWEELPPYFITSS 178 Query: 194 VKRKGIEVLRKAILETIN 211 + G + I E+IN Sbjct: 179 EECLGRTEVLNYI-ESIN 195 >gi|255691813|ref|ZP_05415488.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides finegoldii DSM 17565] gi|260622531|gb|EEX45402.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides finegoldii DSM 17565] Length = 201 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N Sbjct: 5 SAEFVISNTDVKKCPAGTFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYAR +K D +I Y+ ER + ++LLID Sbjct: 65 FLIN---------KNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFLLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKSGRLKMNINAYLRELSKQWEELPPYFI 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS R G + I E+IN Sbjct: 176 SSSENRTGRTEILDYI-ESIN 195 >gi|300690191|ref|YP_003751186.1| probable GTP-binding protein engB [Ralstonia solanacearum PSI07] gi|299077251|emb|CBJ49877.1| probable GTP-binding protein engB [Ralstonia solanacearum PSI07] Length = 233 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 8/202 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA +S PGRTQH+N+F Sbjct: 9 FFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRTQHINYFSV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K P LVD+PGYGYA P + W L+ Y+ R L + +++D R Sbjct: 69 ---MPAKAEDPLGFLVDLPGYGYAEVPGEAKSHWEHLLGDYIQTRPQLAGLIIMMDARRP 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-----EV 188 +D + + ++LTK DKL+ A L + ++ Y V Sbjct: 126 FTDLDCQMVEWFLLTGKPIHVLLTKADKLTNNDASRALMSARKVLAGYRAQIEGDVSLTV 185 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+KR+GIE ++ + + Sbjct: 186 QLFSSLKRRGIEEAQRMVAGWL 207 >gi|167582592|ref|ZP_02375466.1| GTPase EngB [Burkholderia thailandensis TXDOH] Length = 219 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFFTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL R L + L Sbjct: 63 HINYFSVGPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 118 MMDARRPLTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGY 177 Query: 187 ----EVIPTSSVKRKGIEVLRKAILETI 210 V S++KR G++ I + Sbjct: 178 AGKLTVQLFSALKRTGLDDAHALIESWL 205 >gi|167620705|ref|ZP_02389336.1| GTPase EngB [Burkholderia thailandensis Bt4] gi|257137673|ref|ZP_05585935.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia thailandensis E264] gi|119368798|sp|Q2SU58|ENGB_BURTA RecName: Full=Probable GTP-binding protein EngB Length = 219 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFFTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL R L + L Sbjct: 63 HINYFSVGPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 118 MMDARRPLTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGY 177 Query: 187 ----EVIPTSSVKRKGIEVLRKAILETI 210 V S++KR G++ I + Sbjct: 178 AGKLTVQLFSALKRTGLDDAHALIESWL 205 >gi|83721256|ref|YP_443541.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia thailandensis E264] gi|83655081|gb|ABC39144.1| conserved hypothetical protein [Burkholderia thailandensis E264] Length = 228 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 12 FLLHQARFFTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 71 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL R L + L Sbjct: 72 HINYFSVGPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMIL 126 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 127 MMDARRPLTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGY 186 Query: 187 ----EVIPTSSVKRKGIEVLRKAILETI 210 V S++KR G++ I + Sbjct: 187 AGKLTVQLFSALKRTGLDDAHALIESWL 214 >gi|194334829|ref|YP_002016689.1| ribosome biogenesis GTP-binding protein YsxC [Prosthecochloris aestuarii DSM 271] gi|238693315|sp|B4S596|ENGB_PROA2 RecName: Full=Probable GTP-binding protein EngB gi|194312647|gb|ACF47042.1| small GTP-binding protein [Prosthecochloris aestuarii DSM 271] Length = 192 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 72/199 (36%), Positives = 105/199 (52%), Gaps = 13/199 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F + E+ LP + PEI F GRSNVGKS+L+N L RK LA+TS+ PG+TQ +N+ Sbjct: 5 SATFYKSCSELKGLPVSSLPEIVFVGRSNVGKSTLLNTLTGRKALAKTSSTPGKTQLINY 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F D + VD+PGYGYA+ K WG L+ Y+SER + V LLID Sbjct: 65 FTINDR---------LYFVDLPGYGYAKVAKGQRYEWGRLLGGYISEREEISLVVLLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + DQ + FL+ Y IVLTK DKL + + ++++ ++ Sbjct: 116 RHPDMESDQQMIEFLEYYQRPYGIVLTKYDKLKQKEK----SRVRKALKSFSLKTKFIVN 171 Query: 191 TSSVKRKGIEVLRKAILET 209 S++ +G E L + + Sbjct: 172 YSALSGEGKESLLEQLENY 190 >gi|218133239|ref|ZP_03462043.1| hypothetical protein BACPEC_01104 [Bacteroides pectinophilus ATCC 43243] gi|217992112|gb|EEC58116.1| hypothetical protein BACPEC_01104 [Bacteroides pectinophilus ATCC 43243] Length = 195 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 11/186 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P+ PE+AF+G+SNVGKSSLIN L+NRK+LARTS+ PG+TQ +NF+ D Sbjct: 16 SSMPQTTLPEVAFAGKSNVGKSSLINALMNRKSLARTSSQPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M LVD+PGYGYA A ++ WG +I RYL + L+ V+LLID RH D+ + Sbjct: 70 ---VMHLVDLPGYGYANASEEVKAKWGRMIERYLQKSQQLKQVFLLIDIRHAPSANDKLM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DKL + ++++ + + +IP S+ + G+E Sbjct: 127 YDWIVHNGYRPVIIATKLDKLKRSQVAKSVKIVREGLN--LEKEDILIPFSAQTKHGLEQ 184 Query: 202 LRKAIL 207 + + I Sbjct: 185 IWETIE 190 >gi|332139423|ref|YP_004425161.1| ribosome biogenesis GTP-binding protein YsxC [Alteromonas macleodii str. 'Deep ecotype'] gi|238693289|sp|B4S284|ENGB_ALTMD RecName: Full=Probable GTP-binding protein EngB gi|327549445|gb|AEA96163.1| ribosome biogenesis GTP-binding protein YsxC [Alteromonas macleodii str. 'Deep ecotype'] Length = 212 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 12/202 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 + +TK+ F P+I L E+AF+GRSN GKSS +N L ++NLARTS PGR Sbjct: 2 SYYTKAK--FFTSAPDIRHLKNDTGIEVAFAGRSNAGKSSALNTLTRQRNLARTSKTPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F ++ + LVD+PGYG+A+ P W + YL +R +L+ + Sbjct: 60 TQLINVFELEE---------ELRLVDLPGYGFAKVPVAMKKKWQASLGEYLQKRKSLKGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +L+D RH K +DQD+ + + + +LTK DKL + L + + Sbjct: 111 VVLMDIRHPFKDLDQDLIHWAVESNIPVLALLTKADKLKSGKRKAQLLMAQEAALAF-MG 169 Query: 185 HPEVIPTSSVKRKGIEVLRKAI 206 V SS+ + G+ L + + Sbjct: 170 DVTVQTFSSLNKHGLPELERIL 191 >gi|302874449|ref|YP_003843082.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium cellulovorans 743B] gi|307690944|ref|ZP_07633390.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium cellulovorans 743B] gi|302577306|gb|ADL51318.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium cellulovorans 743B] Length = 201 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 103/197 (52%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P+ PE+AF GRSNVGKSSLIN L NRK L + S PG+T+ +NFF+ Sbjct: 8 FVTSAVKTSQYPQDDIPEVAFVGRSNVGKSSLINTLTNRKKLVKVSQTPGKTRLVNFFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + M VD+PGYGYA+ K DSWG I YL R L+ V LL+D R Sbjct: 68 NN---------VMHFVDLPGYGYAKVSKNERDSWGKTIETYLHNRPQLKKVILLLDSRRV 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ ++ IVLTK+DKL+ + + I+ A ++ SS Sbjct: 119 PNEDDILMYDWILHYGYEAVIVLTKVDKLTKNELNKNQKIIAEAIKLPKGA--KMYKFSS 176 Query: 194 VKRKGIEVLRKAILETI 210 +K+ G E L + I + + Sbjct: 177 LKKTGKEELLEGIFKGL 193 >gi|170695712|ref|ZP_02886854.1| GTP-binding protein HSR1-related [Burkholderia graminis C4D1M] gi|170139317|gb|EDT07503.1| GTP-binding protein HSR1-related [Burkholderia graminis C4D1M] Length = 217 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQ Sbjct: 3 FLLHQSRFFTTVNHLRDLPATAQPEIAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + + P LVD+PGYGYA P W L+ YL RS LR + L Sbjct: 63 HINYFSVG-----REDEPVAHLVDLPGYGYAEVPGAAKAHWEALLSTYLQSRSQLRGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ Y A Sbjct: 118 MMDSRRPLTDLDRRMIEWFAPTGKPIHALLTKCDKLTRQESVNALRTTQKGFAEYRAAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + S++KR GI+ + + + Sbjct: 178 QGELTAQLFSALKRVGIDEAHELVESWL 205 >gi|167587741|ref|ZP_02380129.1| GTP-binding protein HSR1-related [Burkholderia ubonensis Bu] Length = 219 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEMLLSTYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 118 MMDSRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESINALRTTQKGLDAYRDAGV 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 E S++KR G++ I + Sbjct: 178 EGKLTAQLFSALKRTGLDEAHALIESWV 205 >gi|205374362|ref|ZP_03227160.1| GTPase EngB [Bacillus coahuilensis m4-4] Length = 193 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P PE A +GRSNVGKSS IN ++ RK+LAR S+ PG+TQ LNF++ + Sbjct: 9 VISAVRPEQYPDDNLPEFALAGRSNVGKSSFINKMLGRKSLARISSKPGKTQTLNFYIIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K +WG +I Y + R L L++D RH Sbjct: 69 E---------QLYFVDVPGYGYAKVSKTERAAWGKMIETYFTSRDKLEAAVLIVDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ F+ + I+ TK DK+ + + K ++ E+I SS Sbjct: 120 TKDDIMMYDFIKHYEIPVIIIATKADKIPKGKWDKHKKVVKDTLQ--LEKGDEIIVFSSE 177 Query: 195 KRKGIEVLRKAI 206 G + +AI Sbjct: 178 TGLGKDKAWEAI 189 >gi|150016213|ref|YP_001308467.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium beijerinckii NCIMB 8052] gi|189037172|sp|A6LT31|ENGB_CLOB8 RecName: Full=Probable GTP-binding protein EngB gi|149902678|gb|ABR33511.1| GTP-binding protein, HSR1-related [Clostridium beijerinckii NCIMB 8052] Length = 198 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 98/194 (50%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P E+AF GRSNVGKSSLIN L NRK LA+ S PG+T+ +NFF+ Sbjct: 8 FITSAVKKNQYPIDNRVEVAFVGRSNVGKSSLINSLTNRKKLAKVSQTPGKTRLVNFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ K DSWG + YL+ R L+ V LL+D RH Sbjct: 68 ND---------DFYLVDLPGYGYAKVSKAEKDSWGKTVEMYLTGREQLKRVVLLVDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + ++ +V TK DKL+ ++ + K ++ + ++ SS Sbjct: 119 PTGDDIIMHEWIKHFGYDVIVVATKSDKLTRNELKKNEKVIKETLK--LNSDDKLYFFSS 176 Query: 194 VKRKGIEVLRKAIL 207 + + G + L + Sbjct: 177 LNKDGKDELIDNLF 190 >gi|254300607|ref|ZP_04968052.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 406e] gi|157810607|gb|EDO87777.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 406e] Length = 228 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 12 FLLHQARFFTTVNHLRDLPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 71 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL R L + L Sbjct: 72 HINYFSVGPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMIL 126 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 127 MMDARRPLTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGY 186 Query: 187 ----EVIPTSSVKRKGIEVLRKAILETI 210 V S++KR G++ I + Sbjct: 187 AGKLTVQLFSALKRTGLDDAHALIESWV 214 >gi|76578808|gb|ABA48283.1| GTP-binding protein [Burkholderia pseudomallei 1710b] Length = 506 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 290 FLLHQARFFTTVNHLRDLPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 349 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL R L + L Sbjct: 350 HINYFSVGPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMIL 404 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 405 MMDARRPLTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGY 464 Query: 187 ----EVIPTSSVKRKGIEVLRKAILETI 210 V S++KR G++ I + Sbjct: 465 AGKLTVQLFSALKRTGLDDAHALIESWV 492 >gi|53720790|ref|YP_109776.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei K96243] gi|53723822|ref|YP_104135.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei ATCC 23344] gi|126454410|ref|YP_001068003.1| GTPase EngB [Burkholderia pseudomallei 1106a] gi|134283345|ref|ZP_01770046.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 305] gi|167721546|ref|ZP_02404782.1| GTPase EngB [Burkholderia pseudomallei DM98] gi|167740518|ref|ZP_02413292.1| GTPase EngB [Burkholderia pseudomallei 14] gi|167817725|ref|ZP_02449405.1| GTPase EngB [Burkholderia pseudomallei 91] gi|167826122|ref|ZP_02457593.1| GTPase EngB [Burkholderia pseudomallei 9] gi|167847633|ref|ZP_02473141.1| GTPase EngB [Burkholderia pseudomallei B7210] gi|167896206|ref|ZP_02483608.1| GTPase EngB [Burkholderia pseudomallei 7894] gi|167904588|ref|ZP_02491793.1| GTPase EngB [Burkholderia pseudomallei NCTC 13177] gi|167912852|ref|ZP_02499943.1| GTPase EngB [Burkholderia pseudomallei 112] gi|167920811|ref|ZP_02507902.1| GTPase EngB [Burkholderia pseudomallei BCC215] gi|228969299|ref|YP_335109.2| GTP-binding protein [Burkholderia pseudomallei 1710b] gi|237814114|ref|YP_002898565.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei MSHR346] gi|242314396|ref|ZP_04813412.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 1106b] gi|254180370|ref|ZP_04886968.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 1655] gi|254190333|ref|ZP_04896841.1| GTP-binding protein, EngB family [Burkholderia pseudomallei Pasteur 52237] gi|254198500|ref|ZP_04904921.1| GTP-binding protein, EngB family [Burkholderia pseudomallei S13] gi|254261978|ref|ZP_04953032.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 1710a] gi|284159950|ref|YP_001060719.2| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 668] gi|81604191|sp|Q62GN6|ENGB_BURMA RecName: Full=Probable GTP-binding protein EngB gi|81607675|sp|Q63Q42|ENGB_BURPS RecName: Full=Probable GTP-binding protein EngB gi|119368796|sp|Q3JMU4|ENGB_BURP1 RecName: Full=Probable GTP-binding protein EngB gi|166225946|sp|A3P082|ENGB_BURP0 RecName: Full=Probable GTP-binding protein EngB gi|52211204|emb|CAH37193.1| putative GTP-binding cell division protein EngB [Burkholderia pseudomallei K96243] gi|52427245|gb|AAU47838.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344] gi|126228052|gb|ABN91592.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 1106a] gi|134245540|gb|EBA45633.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 305] gi|157938009|gb|EDO93679.1| GTP-binding protein, EngB family [Burkholderia pseudomallei Pasteur 52237] gi|169655240|gb|EDS87933.1| GTP-binding protein, EngB family [Burkholderia pseudomallei S13] gi|184210909|gb|EDU07952.1| GTP-binding protein, EngB family [Burkholderia pseudomallei 1655] gi|237503427|gb|ACQ95745.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei MSHR346] gi|242137635|gb|EES24037.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 1106b] gi|254220667|gb|EET10051.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 1710a] gi|283775082|gb|ABN82823.2| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 668] Length = 219 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFFTTVNHLRDLPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL R L + L Sbjct: 63 HINYFSVGPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D+ + + +LTK DKL+ + L T+ + Y A Sbjct: 118 MMDARRPLTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGY 177 Query: 187 ----EVIPTSSVKRKGIEVLRKAILETI 210 V S++KR G++ I + Sbjct: 178 AGKLTVQLFSALKRTGLDDAHALIESWV 205 >gi|118444919|ref|YP_878859.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium novyi NT] gi|166225951|sp|A0Q2K7|ENGB_CLONN RecName: Full=Probable GTP-binding protein EngB gi|118135375|gb|ABK62419.1| GTP-binding protein [Clostridium novyi NT] Length = 200 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P E+AF GRSN GKSSLIN++ NR+ LA+TS+ PG+T+ +NFF+ Sbjct: 8 FIISAVRPSQYPVDNRVEMAFVGRSNAGKSSLINVITNRRKLAKTSSTPGKTRQINFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+A+ K WG ++ +YL R L+ + LL+D RH Sbjct: 68 NN---------EFYFVDLPGYGFAKVSKSEQQKWGSMMEQYLINRHQLKKIVLLVDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ ++ IV TK DKL Q+ + K + + + SS Sbjct: 119 PSKEDVQMYEWIKYYGYETIIVATKSDKLRKNDFQKNRKIIKETLNIRDE--DKFMFFSS 176 Query: 194 VKRKGIEVLRKAILETI 210 + + G E L + + E I Sbjct: 177 LNKSGKEELLEILSEGI 193 >gi|26986869|ref|NP_742294.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas putida KT2440] gi|38372202|sp|Q88RK5|ENGB_PSEPK RecName: Full=Probable GTP-binding protein EngB gi|24981471|gb|AAN65758.1|AE016202_1 GTP-binding protein, putative [Pseudomonas putida KT2440] gi|313496496|gb|ADR57862.1| EngB [Pseudomonas putida BIRD-1] Length = 210 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 97/201 (48%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LN Sbjct: 12 QKAKFALSAAKVEQCPDDQGYEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYGYA+ P W + YL R LR V L++D Sbjct: 71 FFSLDDER---------RLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRGVILMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + ++ I+LTK DKL+ + TL K + IR + Sbjct: 122 VRHPMTDFDKMMLDWAKASSMPMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQ 181 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ KR G+E + + + + Sbjct: 182 LFSAPKRLGVEDAYRVLADWM 202 >gi|291166319|gb|EFE28365.1| ribosome biogenesis GTP-binding protein YsxC [Filifactor alocis ATCC 35896] Length = 203 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 11/192 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PK ++AF GRSNVGKSS IN L+NRK++AR S +PG+T+ +NF+ + Sbjct: 11 SATSPKHYPKDDFLQVAFVGRSNVGKSSAINTLLNRKSIARVSQSPGKTRTINFYSVNE- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 VD+PGYGYA+ K+ + WG ++ RY E L ++LL+D RH K Sbjct: 70 --------QFYFVDLPGYGYAKLSKEEQEGWGKMMERYFIESPNLIHLFLLVDIRHEPKD 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++ F + ++ TK DK++ + Q+ + + + +V SS+K+ Sbjct: 122 SDVQMYQFAHHWNIPITVIATKSDKINRSQLQKNISVIRKKLNLLSGE--DVFMISSLKK 179 Query: 197 KGIEVLRKAILE 208 G E + I++ Sbjct: 180 TGKEEIWSKIID 191 >gi|312131612|ref|YP_003998952.1| ribosome biogenesis gtp-binding protein ysxc [Leadbetterella byssophila DSM 17132] gi|311908158|gb|ADQ18599.1| ribosome biogenesis GTP-binding protein YsxC [Leadbetterella byssophila DSM 17132] Length = 200 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 9/200 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + +F + +I P+ PEIAF GRSNVGKSSLIN+L KNLA+TS+ PG+TQ +N Sbjct: 6 SAVFSKSSAKIDQCPQDNLPEIAFIGRSNVGKSSLINMLTGVKNLAKTSSTPGKTQLINH 65 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 ++ + A LVD+PGYGYA+ P W + YL +R TL V++L+D Sbjct: 66 YLVDN---------AWYLVDLPGYGYAKVPMSEKAKWEKMTWDYLLDRKTLLYVFVLVDI 116 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ D D L + ++ +IV TK DK+ Q + ++ PE Sbjct: 117 RIKPQKSDLDFIRKLGENGIAIKIVFTKEDKVKTMEGQRNIMAFLEALKEDWDILPEYFV 176 Query: 191 TSSVKRKGIEVLRKAILETI 210 TSS KR G + I E + Sbjct: 177 TSSEKRSGKVEMLGLIEEIV 196 >gi|302391294|ref|YP_003827114.1| ribosome biogenesis GTP-binding protein YsxC [Acetohalobium arabaticum DSM 5501] gi|302203371|gb|ADL12049.1| ribosome biogenesis GTP-binding protein YsxC [Acetohalobium arabaticum DSM 5501] Length = 194 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 99/195 (50%), Gaps = 11/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L P+ PEIA +GRSNVGKSSLIN +VNR A TS+ PG+TQ LNF+ Sbjct: 8 YLCSATSPADYPRHNLPEIALAGRSNVGKSSLINQMVNRNRFAHTSSKPGKTQTLNFYNI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + VD+PGYG+AR P + D W +I YL RS L V L++D RH Sbjct: 68 DNI---------FSFVDLPGYGFARVPDEVKDKWSEMIEEYLFHRSNLAGVILIVDARHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ +L + + + +V TK+DKLS + + ++ +R P S+ Sbjct: 119 PTDDDLMMYEWLLEMQLPHLVVGTKVDKLSNSQLKPNRKQIFDKLRLEPQT--PFTYFSA 176 Query: 194 VKRKGIEVLRKAILE 208 + G + I E Sbjct: 177 EEGTGKNEVWSFIKE 191 >gi|71064836|ref|YP_263563.1| ribosome biogenesis GTP-binding protein YsxC [Psychrobacter arcticus 273-4] gi|71037821|gb|AAZ18129.1| cell division checkpoint GTPase YihA [Psychrobacter arcticus 273-4] Length = 302 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 104/217 (47%), Gaps = 15/217 (6%) Query: 2 VSHTIFTKSAWI------FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNL 55 H F A F+ P L P E+AF+GRSN GKSS IN L N++ L Sbjct: 51 AQHADFNTKARQRIQQTEFMMSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQL 110 Query: 56 ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL 115 AR+S PGRTQ +NFF D LVD+PGYGYA P + W + YL Sbjct: 111 ARSSKTPGRTQMINFFNVGDADR--------RLVDLPGYGYAAVPLEMKKEWQVELEEYL 162 Query: 116 SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 RS+L + L+ D RH +K D+ + + + I+LTK DKL ++ L T+ Sbjct: 163 VSRSSLAGLVLMTDIRHPLKFFDEQMLRWAKDGELPVHILLTKADKLKYGASKNALLNTR 222 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 ++ + + S+++++G++ L + Y Sbjct: 223 KRLKQL-GLNCSIQLFSALRKEGLDELAGVMGNWYEY 258 >gi|325274002|ref|ZP_08140160.1| GTP-binding protein YsxC [Pseudomonas sp. TJI-51] gi|324100855|gb|EGB98543.1| GTP-binding protein YsxC [Pseudomonas sp. TJI-51] Length = 210 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 95/201 (47%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LN Sbjct: 12 QKAKFALSAAKVEQCPDDQGYEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYGYA+ P W + YL R LR + L++D Sbjct: 71 FFSLDDER---------RLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRGIILMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + + I+LTK DKL+ + TL K + IR + Sbjct: 122 VRHPMTDFDKMMLDWAKASGMPMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQ 181 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ KR G+E + + + Sbjct: 182 LFSAPKRLGVEEAYRVLAGWM 202 >gi|224826040|ref|ZP_03699143.1| GTP-binding protein HSR1-related [Lutiella nitroferrum 2002] gi|224601677|gb|EEG07857.1| GTP-binding protein HSR1-related [Lutiella nitroferrum 2002] Length = 207 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 101/198 (51%), Gaps = 12/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP E+AF GRSN GKSS IN L NR LA S PGRTQH+NFF Sbjct: 9 FYTTVNHLKDLPP-TRAEVAFVGRSNAGKSSAINTLANRTRLAFVSKTPGRTQHINFFDL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P+ W L+ RYL R L + +++D RH Sbjct: 68 GEER---------YLVDLPGYGYAEVPEAVRTHWVALLGRYLQTRQNLVGLIMIMDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D + F + I+L+K DKLS Q+TL K + +YP + SS Sbjct: 119 LKELDWKMLEFFRETGRPVHILLSKSDKLSRMEQQKTLASVKKALADYPA--VSIQLFSS 176 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ G E + + + + Sbjct: 177 LKKTGGETVEEVVERWFD 194 >gi|330815279|ref|YP_004358984.1| Probable GTP-binding protein eng [Burkholderia gladioli BSR3] gi|327367672|gb|AEA59028.1| Probable GTP-binding protein eng [Burkholderia gladioli BSR3] Length = 219 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ INIL N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVVPEIAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL R L + L Sbjct: 63 HINYFSVG-----PADEPVANLVDLPGYGYAEVPGAAKAHWEALLSAYLKTRPQLCGMIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + ++D + + +LTK DKL+ + L TK ++ Y A Sbjct: 118 MMDSRRPLTELDCRMIEWFAPTGKPIHTLLTKCDKLTRQESVNALRNTKKALQAYRDAGY 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 E S++KR GI+ + + Sbjct: 178 EGALTCQLFSALKRTGIDEAHVLVESWL 205 >gi|315125374|ref|YP_004067377.1| GTPase EngB [Pseudoalteromonas sp. SM9913] gi|315013887|gb|ADT67225.1| GTPase EngB [Pseudoalteromonas sp. SM9913] Length = 218 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 103/196 (52%), Gaps = 9/196 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDITKLPADTGIEVAFAGRSNAGKSSALNALTDQK-LARTSKTPGRTQLINTFEL 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D N M L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 ADVDN-------MRLIDLPGYGFAKVPIEMKKKWQKSLGEYLQKRQSLKGIVVLMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+D+ ++ + +LTK DKL + + + + V SS Sbjct: 125 LKDLDRDLINWAVGSEIPVLALLTKADKLKQGPRKSQVLSVRRELSEL-DGDITVHAFSS 183 Query: 194 VKRKGIEVLRKAILET 209 +K G+ + K + E Sbjct: 184 LKGTGLPEVAKKLDEW 199 >gi|148545398|ref|YP_001265500.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas putida F1] gi|166225971|sp|A5VWQ6|ENGB_PSEP1 RecName: Full=Probable GTP-binding protein EngB gi|148509456|gb|ABQ76316.1| cell division checkpoint GTPase YihA [Pseudomonas putida F1] Length = 210 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 97/201 (48%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LN Sbjct: 12 QKAKFALSAAKVEQCPDDQGYEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYGYA+ P W + YL R LR V L++D Sbjct: 71 FFSLDDER---------RLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRGVILMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + ++ I+LTK DKL+ + TL K + IR + Sbjct: 122 VRHPMTDFDKMMLDWAKASSMPMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQ 181 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ KR G+E + + + + Sbjct: 182 LFSAPKRLGVEDAYRVLADWM 202 >gi|71906265|ref|YP_283852.1| cell division checkpoint GTPase YihA [Dechloromonas aromatica RCB] gi|119369189|sp|Q47IE9|ENGB_DECAR RecName: Full=Probable GTP-binding protein EngB gi|71845886|gb|AAZ45382.1| cell division checkpoint GTPase YihA [Dechloromonas aromatica RCB] Length = 220 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 12/208 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F K+ +FL V + LP+ E+AF+GRSN GKSS IN L R LA S PGR Sbjct: 2 PLFQKA--VFLTTVANLRDLPQDSVREVAFAGRSNAGKSSAINTLAGRVRLAFVSKTPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQHLN+F + VD+PGYGYA+AP+ W GLI YLS+R L + Sbjct: 60 TQHLNYFTLDEGK---------YFVDLPGYGYAKAPEAIRSQWEGLIGPYLSKRDQLAGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +++D R + +D + + I+L+K DKLS + L K + + A Sbjct: 111 VVIMDIRRPMTDLDLRLIDWFRPTGRPIHILLSKSDKLSRQDQTKALRSVKAEVATWGDA 170 Query: 185 H-PEVIPTSSVKRKGIEVLRKAILETIN 211 V SS+K+ G+E + + ++ Sbjct: 171 DLYSVQLFSSLKKAGVEEAERVLASWLD 198 >gi|325527201|gb|EGD04592.1| GTP-binding protein YsxC [Burkholderia sp. TJI49] Length = 219 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVGPAAE-----PVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L T+ + Y Sbjct: 118 MMDSRRPLTDLDRRMIEWFAPTGKPIHTLLTKCDKLTRQESINALRTTQKGLDAYRDQGV 177 Query: 187 ----EVIPTSSVKRKGIEVLRKAILETI 210 V S++KR G++ I + Sbjct: 178 TGKLTVQLFSALKRTGLDEAHALIESWV 205 >gi|331701127|ref|YP_004398086.1| GTP-binding protein engB [Lactobacillus buchneri NRRL B-30929] gi|329128470|gb|AEB73023.1| GTP-binding protein engB [Lactobacillus buchneri NRRL B-30929] Length = 195 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 99/192 (51%), Gaps = 11/192 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P PEIA GRSNVGKSSL N+L+NR ARTS+ PG+TQ LNF+ +D Sbjct: 10 ISAVAEKQYPNTQFPEIALVGRSNVGKSSLTNVLINRNKFARTSSQPGKTQTLNFYNIED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+A K + + WG +I YL++R LR V L+D RH Sbjct: 70 ---------KLYFVDVPGYGYAKASKASREKWGRMIETYLTKREQLRGVITLVDGRHAPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + ++L + V TK+DK+S + K ++ A+ +I S++ Sbjct: 121 DDDVSMHNWLKYYNIPMLTVATKMDKISSGKWNKQESLIKKTLQ--LDAYEPLILFSALT 178 Query: 196 RKGIEVLRKAIL 207 + G + + I Sbjct: 179 KTGKNEIWRWIE 190 >gi|310657904|ref|YP_003935625.1| GTP-binding protein [Clostridium sticklandii DSM 519] gi|308824682|emb|CBH20720.1| GTP-binding protein [Clostridium sticklandii] Length = 202 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 12/193 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P PE+AF GRSNVGKSS IN L+NR++LAR S PG+T+ +NF+ Sbjct: 9 VISAMSKTQYPHDELPEVAFVGRSNVGKSSAINTLLNRRSLARVSQNPGKTRTINFYKIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + VD+PGYGYA+ K WG ++ Y LR ++LL+D RH Sbjct: 69 E---------EFYFVDLPGYGYAKTAKTERQHWGTVMQEYFENSQDLRHIFLLLDIRHEP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K+ D ++ + + I+ TK DK+S Q+T + + + +++P SS+ Sbjct: 120 KEDDILMYKYAVHYNIPVTIIATKSDKISRGAFQKTFSMMRKKLDYHGE---KILPISSL 176 Query: 195 KRKGIEVLRKAIL 207 K+ G + + I+ Sbjct: 177 KKTGKDEIWNHIV 189 >gi|268611238|ref|ZP_06144965.1| hypothetical protein RflaF_17292 [Ruminococcus flavefaciens FD-1] Length = 202 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 75/202 (37%), Positives = 108/202 (53%), Gaps = 12/202 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F + +P EIAF+G SNVGKS+LIN L NRKNLAR S+ PG+T +N Sbjct: 6 NKAEFSAAYGKFSQIPAPERIEIAFAGHSNVGKSTLINKLFNRKNLARVSSVPGKTATIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ L + VD+PGYGYA+ K + W GLI YLS +R V++L+D Sbjct: 66 FY----------GLENLYFVDLPGYGYAKVSKSEKERWAGLIEGYLSSDRDIRLVFMLVD 115 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D + ++L + + +VLTK DKL+ T + +E K I + H I Sbjct: 116 MRHAPTKDDIHMINYLIDTEMPFVLVLTKADKLNKTERAKRIEAFKDEIPCFEDIHS--I 173 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 P SS +G+E LR + + + Sbjct: 174 PFSSQTFEGVEELRAIVEDIAD 195 >gi|77456283|ref|YP_345788.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas fluorescens Pf0-1] gi|119369235|sp|Q3KKA7|ENGB_PSEPF RecName: Full=Probable GTP-binding protein EngB gi|77380286|gb|ABA71799.1| putative GTP-binding protein [Pseudomonas fluorescens Pf0-1] Length = 214 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 94/189 (49%), Gaps = 10/189 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFK 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDDER---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLGGRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDLLMLDWAVAAGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDQVTIQLFS 184 Query: 193 SVKRKGIEV 201 + KR G+E Sbjct: 185 APKRMGLEE 193 >gi|58337155|ref|YP_193740.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus acidophilus NCFM] gi|227903731|ref|ZP_04021536.1| GTPase [Lactobacillus acidophilus ATCC 4796] gi|81311481|sp|Q5FKR5|ENGB_LACAC RecName: Full=Probable GTP-binding protein EngB gi|58254472|gb|AAV42709.1| GTP-binding protein ENGB family [Lactobacillus acidophilus NCFM] gi|227868618|gb|EEJ76039.1| GTPase [Lactobacillus acidophilus ATCC 4796] Length = 196 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 102/194 (52%), Gaps = 10/194 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + PK PEIA +GRSNVGKSSLIN L+ RKNLARTS+ PG+TQ LNF++ D Sbjct: 11 SAVKEEQYPKDNLPEIALAGRSNVGKSSLINTLLKRKNLARTSSQPGKTQTLNFYLVND- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYA+ +K +G +I YL R L+ + +LID RH + Sbjct: 70 --------DFYLVDVPGYGYAKVSQKRRQEFGEMIQDYLETRPNLKGLIILIDSRHEPTK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++ + + +V TK+DK+ + + + + + H V+ SSV + Sbjct: 122 DDISMYEYAQYLNIPILVVCTKMDKIKKNQTNKVMTGLRKKL-DLNYDHVTVLTFSSVTK 180 Query: 197 KGIEVLRKAILETI 210 + L I + I Sbjct: 181 FHVTELGNWIEDKI 194 >gi|302877399|ref|YP_003845963.1| ribosome biogenesis GTP-binding protein YsxC [Gallionella capsiferriformans ES-2] gi|302580188|gb|ADL54199.1| ribosome biogenesis GTP-binding protein YsxC [Gallionella capsiferriformans ES-2] Length = 208 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 107/206 (51%), Gaps = 14/206 (6%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F+ +A F V I LP G E+AF GRSN GKSS IN L N LA TS PGRT Sbjct: 3 LFSLAA--FYTTVNHIKDLPMHGGREVAFVGRSNAGKSSAINTLANHVRLAYTSKTPGRT 60 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 QHLN+F + +VD+PGYGYA+ P + W L+ YL +R L + Sbjct: 61 QHLNYFSLGN---------DGYIVDLPGYGYAKVPPEAKRHWEALLSTYLQKREELSGLI 111 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK-YLIRNYPTA 184 +++D R + ++D+ + + I+LTK DKLS + TL K K YL NYP Sbjct: 112 VIMDIRRPLLELDETMLDWFATTGKPVHILLTKSDKLSRQQSTLTLMKVKAYLAENYPQC 171 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 V SS+K++G+E I + Sbjct: 172 --SVQLFSSLKKQGLEEAEAVIAGWL 195 >gi|167031160|ref|YP_001666391.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas putida GB-1] gi|189037186|sp|B0KG04|ENGB_PSEPG RecName: Full=Probable GTP-binding protein EngB gi|166857648|gb|ABY96055.1| small GTP-binding protein [Pseudomonas putida GB-1] Length = 210 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 95/201 (47%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LN Sbjct: 12 QKATFALSAAKVEQCPDDQGYEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D LVD+PGYGYA+ P W + YL R LR V L++D Sbjct: 71 FFSLDDER---------RLVDLPGYGYAKVPIPLKQHWQKHLEAYLGSRECLRGVILMMD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + + + I+LTK DKL+ + TL K + IR + Sbjct: 122 VRHPMTDFDKMMLDWAKASGMPMHILLTKADKLTHGAGKNTLLKVQSEIRKGWGDGVTIQ 181 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ KR G+E + + + Sbjct: 182 LFSAPKRLGVEDAYRVLAGWM 202 >gi|325916357|ref|ZP_08178632.1| cell division checkpoint GTPase YihA [Xanthomonas vesicatoria ATCC 35937] gi|325537405|gb|EGD09126.1| cell division checkpoint GTPase YihA [Xanthomonas vesicatoria ATCC 35937] Length = 207 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 96/195 (49%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 LP G E+AF+GRSN GKSS +N L + +LAR S PGRTQ L FF + Sbjct: 13 SAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQQLVFFQIQ-- 70 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K Sbjct: 71 -------PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKD 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + ++ + +LTK DKL +TL+K K + + V S R Sbjct: 124 YDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESR 183 Query: 197 KGIEVLRKAILETIN 211 +G++ LR + + Sbjct: 184 QGVDELRGIVGGWLG 198 >gi|188990195|ref|YP_001902205.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. campestris str. B100] gi|167731955|emb|CAP50141.1| GTP-binding protein [Xanthomonas campestris pv. campestris] Length = 222 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 96/195 (49%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 LP G E+AF+GRSN GKSS +N L + +LAR S PGRTQ L FF + Sbjct: 28 SAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQQLVFFQIQ-- 85 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K Sbjct: 86 -------PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKD 138 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + ++ + +LTK DKL +TL+K K + + V S R Sbjct: 139 YDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVSSRFGDSVTVQTYSGESR 198 Query: 197 KGIEVLRKAILETIN 211 +G++ LR + + Sbjct: 199 QGVDELRGIVGGWLG 213 >gi|21232826|ref|NP_638743.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767103|ref|YP_241865.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. campestris str. 8004] gi|24418370|sp|Q8P5E4|ENGB_XANCP RecName: Full=Probable GTP-binding protein EngB gi|81306913|sp|Q4UYM8|ENGB_XANC8 RecName: Full=Probable GTP-binding protein EngB gi|21114651|gb|AAM42667.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572435|gb|AAY47845.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. 8004] Length = 207 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 96/195 (49%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 LP G E+AF+GRSN GKSS +N L + +LAR S PGRTQ L FF + Sbjct: 13 SAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQQLVFFQIQ-- 70 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K Sbjct: 71 -------PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKD 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + ++ + +LTK DKL +TL+K K + + V S R Sbjct: 124 YDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVSSRFGDSVTVQTYSGESR 183 Query: 197 KGIEVLRKAILETIN 211 +G++ LR + + Sbjct: 184 QGVDELRGIVGGWLG 198 >gi|254490408|ref|ZP_05103595.1| putative GTPase [Methylophaga thiooxidans DMS010] gi|224464374|gb|EEF80636.1| putative GTPase [Methylophaga thiooxydans DMS010] Length = 219 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 110/193 (56%), Gaps = 10/193 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 ++ LP+ E+AF+GRSN GKSS IN + ++LARTS PGRTQ +NFF D Sbjct: 27 SATQLSQLPEDTGFEVAFAGRSNAGKSSAINTITGIRSLARTSKTPGRTQMINFFHFDD- 85 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 ALVD+PGYGYA+ P+K W + +YL R +LR + +++D RH +K+ Sbjct: 86 --------QRALVDLPGYGYAKVPEKMKQKWQQTLAKYLETRQSLRGLMMMMDVRHPLKE 137 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + S+ ++ +S I+LTK DKL + A+++L K ++N+ V SS+ + Sbjct: 138 FDLQMLSWANQADLSVHILLTKADKLKNSAAKQSLLKVVAELKNHDLKA-SVQLFSSLNK 196 Query: 197 KGIEVLRKAILET 209 G ++ + + E Sbjct: 197 SGRDIAVQKLDEW 209 >gi|119369233|sp|Q4KKJ8|ENGB_PSEF5 RecName: Full=Probable GTP-binding protein EngB Length = 213 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 94/189 (49%), Gaps = 10/189 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFK 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDDDR---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSQIRKGWGEAVTIQLFS 184 Query: 193 SVKRKGIEV 201 + KR G+E Sbjct: 185 APKRMGLEE 193 >gi|70733595|ref|YP_257235.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas fluorescens Pf-5] gi|68347894|gb|AAY95500.1| GTP-binding protein EngB [Pseudomonas fluorescens Pf-5] Length = 268 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 94/189 (49%), Gaps = 10/189 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 70 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFK 128 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 129 LDDDR---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLKGLILMMDIRH 179 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 180 PMTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSQIRKGWGEAVTIQLFS 239 Query: 193 SVKRKGIEV 201 + KR G+E Sbjct: 240 APKRMGLEE 248 >gi|169350156|ref|ZP_02867094.1| hypothetical protein CLOSPI_00898 [Clostridium spiroforme DSM 1552] gi|169292939|gb|EDS75072.1| hypothetical protein CLOSPI_00898 [Clostridium spiroforme DSM 1552] Length = 199 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 11/202 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ P+ PE+ +GRSNVGKSS IN ++NR LA+ S+ PG+T+ LN Sbjct: 5 KKAEYVLSAAWKSQWPQETYPEMCLAGRSNVGKSSFINAMLNRNGLAKVSSTPGKTRTLN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D A+ VD+PGYGYA+ +G + Y+ RS+L+ LL+D Sbjct: 65 FFNVND---------ALYFVDVPGYGYAKVNNNVTKQFGKTMDEYIKLRSSLKGFILLVD 115 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D ++ F+ V +V TK DKL ++ + K + + + I Sbjct: 116 YRHKPTKDDVMMYEFVKHHNVPVIVVATKEDKLKRNDLKKNEQLIKNTLGFHKE--DKFI 173 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 SS+K+ GIE AI E + Sbjct: 174 RFSSLKKIGIEEAWNAIYELCD 195 >gi|257091947|ref|YP_003165588.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044471|gb|ACV33659.1| GTP-binding protein HSR1-related [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 234 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 12/207 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F ++A F V ++ LP E+AF+GRSN GKSS IN L N LA S PGR Sbjct: 2 PLFQQAA--FHTTVADLRDLPSDSLCEVAFAGRSNAGKSSAINTLANHSRLAFVSKTPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQHLN+F D VD+PGYG+A+AP++ W GL+ YL R LR + Sbjct: 60 TQHLNYFRLADGK---------YFVDLPGYGFAKAPEEIRSQWEGLLAPYLRHREVLRGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D RH + ++D + + ++L+K DKL+ L + +++ + Sbjct: 111 VLIMDSRHPLTELDVQMLRWFAPTGKPLHVLLSKADKLTRQEQVLALREVHAVLQEF-GE 169 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETIN 211 + V SS+K+ G+ + + Sbjct: 170 NGSVQLFSSLKKSGVREAETVLAGWLG 196 >gi|218187495|gb|EEC69922.1| hypothetical protein OsI_00346 [Oryza sativa Indica Group] Length = 225 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 65/181 (35%), Positives = 101/181 (55%), Gaps = 10/181 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F +D + LVD Sbjct: 41 EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVED---------GIRLVD 91 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA P++ W + YL R++L+ + +L+D RH +K +DQ + + Sbjct: 92 LPGYGYAEVPEEMKRKWQRALGEYLQMRNSLKGLVVLMDIRHPLKDLDQQMIQWAVDVGT 151 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++LTK DKL+ + L + + + +V SS+K+ G++ LR+ + Sbjct: 152 PVLVLLTKADKLASGARKAQLNMVREAVLPF-MGDIQVEAFSSLKKIGVDKLRQKLDTWF 210 Query: 211 N 211 N Sbjct: 211 N 211 >gi|160936364|ref|ZP_02083733.1| hypothetical protein CLOBOL_01256 [Clostridium bolteae ATCC BAA-613] gi|158440647|gb|EDP18385.1| hypothetical protein CLOBOL_01256 [Clostridium bolteae ATCC BAA-613] Length = 193 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PE AF+G+SNVGKSSLIN L+NRK ARTS+ PG+TQ +NF+ Sbjct: 16 SKLPENTLPEFAFAGKSNVGKSSLINALMNRKAYARTSSQPGKTQTINFYNIN------- 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 A+ VD+PGYGYA+ + WG +I RYL L+ V+LLID RH D+ + Sbjct: 69 --GALYYVDLPGYGYAKIAVAVKEKWGKMIERYLRNSQMLKMVFLLIDIRHEPSANDKLM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DK++ + Q+ ++ + + +IP S+ ++G + Sbjct: 127 YEWIIFNGYHPVIIATKLDKINRSQVQKHVKMVREGLGMEKDGI--IIPFSAETKQGRDE 184 Query: 202 LRKAILETI 210 + I ++ Sbjct: 185 IWDLIEGSL 193 >gi|51246489|ref|YP_066373.1| hypothetical protein DP2637 [Desulfotalea psychrophila LSv54] gi|81641346|sp|Q6AJW0|ENGB_DESPS RecName: Full=Probable GTP-binding protein EngB gi|50877526|emb|CAG37366.1| conserved hypothetical GTP-binding protein [Desulfotalea psychrophila LSv54] Length = 193 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 103/198 (52%), Gaps = 12/198 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 FL V + LP+ G PE AF+GRSNVGKSSL+N L+ R + S PG+TQ LNFF Sbjct: 7 TFLLSVHGLDQLPEDGLPEFAFAGRSNVGKSSLMNTLLRRSGFVKVSGRPGKTQGLNFFQ 66 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYG+AR K+ ++W LI Y+SER L+CV ++ID RH Sbjct: 67 AAE---------DCMLVDLPGYGFARVSKEMQNNWQKLITSYISEREALKCVVVIIDIRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 K +D+ + +L ++ V + TKIDKLS L + E I S Sbjct: 118 EPKALDRQLLDWLREQKVPVLPIYTKIDKLSGNQLSRHAAI---LDAGHGIKKDERILFS 174 Query: 193 SVKRKGIEVLRKAILETI 210 S +G + L + + Sbjct: 175 SKTGQGRDELIAVLESYL 192 >gi|323484457|ref|ZP_08089823.1| hypothetical protein HMPREF9474_01574 [Clostridium symbiosum WAL-14163] gi|323692473|ref|ZP_08106707.1| GTP-binding protein [Clostridium symbiosum WAL-14673] gi|323402235|gb|EGA94567.1| hypothetical protein HMPREF9474_01574 [Clostridium symbiosum WAL-14163] gi|323503470|gb|EGB19298.1| GTP-binding protein [Clostridium symbiosum WAL-14673] Length = 195 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P+ PE AF+G+SNVGKSSLIN L+NRK+ AR S PG+TQ +NF+ D Sbjct: 16 SKMPENTQPEFAFAGKSNVGKSSLINSLMNRKSYARISAQPGKTQTINFYHIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 A+ VD+PGYGYARA + WG +I YL + LRCV+LLID RH D+ + Sbjct: 70 ---ALYYVDLPGYGYARANVEVKAKWGKMIEDYLHQSKMLRCVFLLIDIRHEPSSNDKLM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + I+ TK DK+ + Q+ ++ + + +IP S+ ++G E Sbjct: 127 YDWIVSQGYQPVIIATKADKIKRSQLQKQMKILRTGLEI--GTDVLMIPFSAETKQGREE 184 Query: 202 LRKAILET 209 + I + Sbjct: 185 IWDYIEKL 192 >gi|285017649|ref|YP_003375360.1| GTP-binding protein [Xanthomonas albilineans GPE PC73] gi|283472867|emb|CBA15372.1| probable gtp-binding protein [Xanthomonas albilineans] Length = 207 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 9/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L LP E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF Sbjct: 10 YLLSAHNARQLPDDDGWEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA+ P++ W I Y R LR + +++D RH Sbjct: 70 Q---------PERYLVDLPGYGYAKVPQELQAHWQSFIDTYFRTRQALRGLVVVMDIRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + S+ ++ + +LTK DKL + L++ + + V S Sbjct: 121 LKDYDRQMLSYAVQRGLPAHALLTKADKLGRGQQAQALQQVRKELLKAFGDTVGVQTFSG 180 Query: 194 VKRKGIEVLRKAILETIN 211 R+G++ R + + Sbjct: 181 ASRQGVDEARAIVGGWLG 198 >gi|91774588|ref|YP_544344.1| GTPase EngB [Methylobacillus flagellatus KT] gi|119369214|sp|Q1H4T4|ENGB_METFK RecName: Full=Probable GTP-binding protein EngB gi|91708575|gb|ABE48503.1| cell division checkpoint GTPase YihA [Methylobacillus flagellatus KT] Length = 207 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 12/206 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F + F + LP E+ F+GRSN GKSS +N L N LA S PGR Sbjct: 2 PLFQNA--TFHISAHNLSDLPAPAGIEVVFAGRSNAGKSSALNTLANHNRLAFVSKQPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +NFF + LVD+PGYGYA+ P+ W + YLS+R + + Sbjct: 60 TQLINFFSLGNDR---------FLVDLPGYGYAKVPEAVRKHWQLTLASYLSQRPCIGGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++DCRH + +D+ + ++ +LTK DKLS A +TL++ + + Sbjct: 111 VLVMDCRHPLTPLDRQMLNWYSPSGKPIHALLTKADKLSRQAANQTLQQVRKELEASW-G 169 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 + V SS+K++G+E I + Sbjct: 170 NCSVQLFSSLKKQGVEEAETVIGRWL 195 >gi|53803258|ref|YP_115009.1| GTP-binding protein [Methylococcus capsulatus str. Bath] gi|81681069|sp|Q604E1|ENGB_METCA RecName: Full=Probable GTP-binding protein EngB gi|53757019|gb|AAU91310.1| GTP-binding protein [Methylococcus capsulatus str. Bath] Length = 210 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 9/198 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +LR + E+ P E+AF+GRSN GKSS IN L N LAR S PGRT+ +NFF Sbjct: 10 YLRSILELKDAPPDQGCEVAFAGRSNAGKSSAINTLANVGGLARVSKTPGRTRMINFFSI 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ P + W + +YL R +LR V+LL+D RH Sbjct: 70 DDGR---------RLVDLPGYGYAKVPGEIHRRWEAALEQYLRYRQSLRGVFLLMDVRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++D+ + + ++++ + LTK DKLS A K + Y + V SS Sbjct: 121 FTEMDEVMIEWCAHRSIALHVALTKSDKLSRGAAMNARLMAKTRLAGYGSPDFSVQLFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 +K+ G E + + ++ Sbjct: 181 LKKSGTEEAWEVLGRWLD 198 >gi|291543933|emb|CBL17042.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus sp. 18P13] Length = 196 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 105/203 (51%), Gaps = 14/203 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ F +P EIAF+GRSNVGKS+LIN + NRKNLAR S PG+T Sbjct: 3 FNKAE--FAAAYGSFSQIPACSRMEIAFAGRSNVGKSTLINKIFNRKNLARVSAVPGKTA 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ + + VD+PGYGYA+ K + W GLI YL+ +R ++L Sbjct: 61 TINFYQLEH----------VYFVDLPGYGYAKVAKSEKERWAGLIEGYLNSERDIRLIFL 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID RH D + +L + + + ++LTK DKL Q +E I + Sbjct: 111 LIDMRHAPSADDLHMIDYLVEAELPFVVILTKADKLKKMARQARMEAFAQEIPYFSEL-- 168 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 VIP SS +G+E +R+ I E Sbjct: 169 TVIPFSSQTFEGVEQVRQIITEL 191 >gi|328468551|gb|EGF39553.1| GTP-binding protein YsxC [Lactobacillus helveticus MTCC 5463] Length = 194 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 74/191 (38%), Positives = 103/191 (53%), Gaps = 10/191 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PK PEIA SGRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 11 SAVREDQYPKDNLPEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTLNFYLIND- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYAR +K +G +I YL R L+ + +LID RH + Sbjct: 70 --------EFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++++ + +V TKIDK+ + + + + K I + + V+ SSV + Sbjct: 122 DDIAMYNYAQYLNLPILVVCTKIDKIKKSQVNKAMSRLKKNI-DLNYDYVTVLTFSSVTK 180 Query: 197 KGIEVLRKAIL 207 + L I Sbjct: 181 LHVAELGNWIE 191 >gi|220933280|ref|YP_002512179.1| cell division checkpoint GTPase YihA [Thioalkalivibrio sp. HL-EbGR7] gi|254783218|sp|B8GTD2|ENGB_THISH RecName: Full=Probable GTP-binding protein EngB gi|219994590|gb|ACL71192.1| cell division checkpoint GTPase YihA [Thioalkalivibrio sp. HL-EbGR7] Length = 209 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 11/205 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F + A FL P E+AF+GRSN GKSS IN+L N++ LARTS PGRTQ Sbjct: 4 FYQQA-RFLISAARPDAFPTDEGMEVAFAGRSNAGKSSAINVLCNQRALARTSKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NFF + LVD+PGYGYA+ P+ +W L+ YL ER+ L+ + + Sbjct: 63 LINFFALDESR---------RLVDLPGYGYAKVPEAMRKAWRKLMEHYLGERACLKGLVV 113 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D RH + D + + ++ ++ ++LTK DK+ A +T + + + Sbjct: 114 VMDIRHPLTDHDWTMLGWARERGLAVHVLLTKADKIRRGPAMDTARQVARALGD-AGIEA 172 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 V P S++KR+G+E + + + Sbjct: 173 TVQPFSALKREGVEDAHGILDQWLG 197 >gi|323466766|gb|ADX70453.1| Probable GTP-binding protein engB [Lactobacillus helveticus H10] Length = 196 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 76/194 (39%), Positives = 104/194 (53%), Gaps = 10/194 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PK EIA SGRSNVGKSSLIN L+NRKNLARTS+ PG+TQ LNF++ D Sbjct: 11 SAVREDQYPKDNLSEIALSGRSNVGKSSLINTLLNRKNLARTSSQPGKTQTLNFYLIND- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYAR +K +G +I YL R L+ + +LID RH + Sbjct: 70 --------EFYLVDVPGYGYARVSQKKRQEFGEMIQDYLETRPNLKGLVILIDSRHEPTK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++++ + +V TKIDK+ + + + + K I + H V+ SSV + Sbjct: 122 DDIAMYNYAQYLNLPILVVCTKIDKIKKSQVNKVMSRLKKNI-DLNYDHVTVLTFSSVTK 180 Query: 197 KGIEVLRKAILETI 210 + L I E I Sbjct: 181 LHVAELGNWIEEKI 194 >gi|298373028|ref|ZP_06983018.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroidetes oral taxon 274 str. F0058] gi|298275932|gb|EFI17483.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroidetes oral taxon 274 str. F0058] Length = 200 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + P+ E+AF GRSNVGKSSLIN L +K+LA+TS+ PG+T +N Sbjct: 4 NEAEFVISNSDFRRCPQGDTTEVAFIGRSNVGKSSLINYLTGKKDLAKTSSKPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ +VD+PGYG+A+ K + + +I Y+ R L +++L+D Sbjct: 64 HFLINKR---------FHIVDLPGYGFAKVSKTHREKLRKIIEDYIMFRPQLANLFVLLD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R + ID + +L V + IV TK DK S + + +E + + + P + Sbjct: 115 SRLSPQAIDLEFMEWLGLGGVPFSIVFTKTDKQSRSRLMQNIETYRTKLYETWESLPPIF 174 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS KR+G E + I + + Sbjct: 175 MTSSEKREGREEILDYIEKIV 195 >gi|307297311|ref|ZP_07577117.1| ribosome biogenesis GTP-binding protein YsxC [Thermotogales bacterium mesG1.Ag.4.2] gi|306916571|gb|EFN46953.1| ribosome biogenesis GTP-binding protein YsxC [Thermotogales bacterium mesG1.Ag.4.2] Length = 190 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 11/193 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +R V G P EIAF+GRSNVGKSSL+N L RK LA+TS+ PG+T+ +NF+ Sbjct: 9 VRTVFSKGEYPPPLRREIAFAGRSNVGKSSLLNSLFGRK-LAKTSSTPGKTRSINFYGVN 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + VD+PGYGYA+A + W LI+ Y R L V +L+D RH + Sbjct: 68 ---------REIYFVDLPGYGYAKASMSEREKWKKLIIDYFESREELSLVVVLVDIRHPL 118 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + ++ + + +VLTK DKLS + K + + +P V S+V Sbjct: 119 QPADIQMLEWVTYYTIPFILVLTKADKLSRNQQIIAEKSIKDELASL-GVYPPVFVVSAV 177 Query: 195 KRKGIEVLRKAIL 207 K++GIE L A+L Sbjct: 178 KKQGIEELLIALL 190 >gi|325981834|ref|YP_004294236.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas sp. AL212] gi|325531353|gb|ADZ26074.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosomonas sp. AL212] Length = 198 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 100/202 (49%), Gaps = 14/202 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F E LPK EIAFSGRSN GKSS IN L NR LA S PGRTQ +NF Sbjct: 6 NATFYTSAHERRDLPKHSGIEIAFSGRSNAGKSSAINALTNRNRLAFVSKTPGRTQLINF 65 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F LVD+PGYGYA+ P+ W L+ YL R++LR + L++D Sbjct: 66 FQLASNQ---------FLVDLPGYGYAKVPEHVRLHWKNLLSNYLQTRNSLRGLILVMDI 116 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--V 188 RH +K D + + I+LTK DKLS A TL+K I+ + +P+ V Sbjct: 117 RHPLKPQDIQMLDWFSSTGKVIHILLTKADKLSKQQANITLQKVALFIKEF---YPQCSV 173 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+ G++ I E + Sbjct: 174 QLFSSITNIGVDDAMTVITEWL 195 >gi|309805713|ref|ZP_07699753.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 09V1-c] gi|329921292|ref|ZP_08277730.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners SPIN 1401G] gi|308164966|gb|EFO67209.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 09V1-c] gi|328934584|gb|EGG31088.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners SPIN 1401G] Length = 195 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 104/197 (52%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+ PEIA SGRSNVGKSSLIN ++NR+NLARTS PG+TQ LNF++ Sbjct: 8 FVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTLNFYLV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA+ K+ +G +I YL R+ L+ + LL+D RH Sbjct: 68 N---------TDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++F++ + +V TKIDKL + + K + + + +P SS Sbjct: 119 PTVDDINMFNYALCLNIPILVVATKIDKLKKSAIGQLESKIGLSL-DLTQSQVTFLPFSS 177 Query: 194 VKRKGIEVLRKAILETI 210 + I+ + I +I Sbjct: 178 ETKINIDKFWQWIENSI 194 >gi|300811980|ref|ZP_07092437.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123480|ref|YP_004033739.1| GTP-binding protein engb [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300497041|gb|EFK32106.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312280043|gb|ADQ60762.1| Probable GTP-binding protein engB [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325684389|gb|EGD26558.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 200 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 7/198 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + P+ G EIA +GRSNVGKSS IN L+ RKNLARTS++PG+TQ LNF+ Sbjct: 8 FSVSAVKASQYPEGGLDEIALAGRSNVGKSSFINTLLQRKNLARTSSSPGKTQTLNFYRV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD+PGYGYA+ KK + +G +I YL R+ L+ + LLID RH Sbjct: 68 D------SDQADFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILLIDGRHE 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ + + +V TK+DK+ +T + + N + +P SS Sbjct: 122 PTADDIAMYDYAQYLNLPILLVATKMDKIKKNAFNKTEAAFRKHL-NLNKDNVTFLPFSS 180 Query: 194 VKRKGIEVLRKAILETIN 211 V + ++ ++ I ++ Sbjct: 181 VTKLNVDQVKDWIQARLD 198 >gi|253680894|ref|ZP_04861697.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum D str. 1873] gi|253562743|gb|EES92189.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum D str. 1873] Length = 196 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 11/195 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P E+AF GRSN GKS+LIN + NRK LA+TS+ PG+T+ +NFF+ Sbjct: 8 FIISAVKPAQYPTDNRIEMAFVGRSNAGKSTLINTITNRKKLAKTSSTPGKTRLINFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+A+ K WG ++ YL R L+ + LL+D RH Sbjct: 68 NN---------DFYFVDLPGYGFAKVSKSEQQKWGSMMETYLVNRPQLKKIVLLVDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ ++ IV TK DKL Q+ + + + + S+ Sbjct: 119 PTKDDVQMYEWIKYYGYEAIIVATKSDKLKKNDFQKNKKIIRETLNIREE--DKFTFFSA 176 Query: 194 VKRKGIEVLRKAILE 208 + + G E L + + + Sbjct: 177 LNKSGKEELLELLAD 191 >gi|78064955|ref|YP_367724.1| GTPase EngB [Burkholderia sp. 383] gi|119368797|sp|Q39KD6|ENGB_BURS3 RecName: Full=Probable GTP-binding protein EngB gi|77965700|gb|ABB07080.1| cell division checkpoint GTPase YihA [Burkholderia sp. 383] Length = 219 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 100/208 (48%), Gaps = 9/208 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F V + LP PEIAF+GRSN GKS+ IN+L N+K LA S PGRTQ Sbjct: 3 FLLHQARFYTTVNHLRDLPPTVQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+N+F + P LVD+PGYGYA P W L+ YL+ RS L + L Sbjct: 63 HINYFSVG-----PADEPVANLVDLPGYGYAEVPGAAKAHWEMLLSSYLATRSQLCGLIL 117 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D R + +D+ + + +LTK DKL+ + L + + Y Sbjct: 118 MMDSRRPLTDLDRRMIEWFVPTGKPIHTLLTKCDKLTRQESINALRTAQKGLDAYRDQGV 177 Query: 187 E----VIPTSSVKRKGIEVLRKAILETI 210 + V S++KR G++ + I + Sbjct: 178 QGKLTVQLFSAMKRVGLDEAHELIESWV 205 >gi|238897343|ref|YP_002923020.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259645900|sp|C4K8N5|ENGB_HAMD5 RecName: Full=Probable GTP-binding protein EngB gi|229465098|gb|ACQ66872.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 205 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 10/197 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ P I LP E+AF+GRSN GKSS +N L +KNLA+ S PGRTQ +N Sbjct: 9 HSARFVMSAPNIHHLPPDQGMEVAFAGRSNAGKSSALNTLTQQKNLAKISKTPGRTQLIN 68 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + + LVD+PGYGYA P W + YL++R LR + +L+D Sbjct: 69 LFEVAE---------GIRLVDLPGYGYAAVPLAIKIKWQKALNEYLNKRDCLRGLVILMD 119 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +DQ + + K + ++LTK+DKLS + ++ L+ K I + EV Sbjct: 120 IRHPLKNLDQQMIVWAINKRIPVYLLLTKVDKLSRSASKIQLDMVKEAILPF-MGDIEVD 178 Query: 190 PTSSVKRKGIEVLRKAI 206 SS+K+ GI+ L+ + Sbjct: 179 VFSSLKKIGIDKLQNKL 195 >gi|171462910|ref|YP_001797023.1| GTP-binding protein HSR1-related [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692837|sp|B1XST2|ENGB_POLNS RecName: Full=Probable GTP-binding protein EngB gi|171192448|gb|ACB43409.1| GTP-binding protein HSR1-related [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 221 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 104/206 (50%), Gaps = 14/206 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP E+AF+GRSN GKSS IN+L N+K LA S PGRTQH+N+F Sbjct: 9 FATTVNDTHYLPATPLREVAFAGRSNAGKSSAINVLCNQKRLAFASKTPGRTQHINYFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L LVD+PGYGYA + W L+ YL ER L V L++D R G Sbjct: 69 FAKDDL-----LAYLVDLPGYGYAAVNHETKYHWNTLLSDYLQEREQLVGVVLIVDSRRG 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE------ 187 + +D+ + + ++L+K DKL+ + + TLE + ++ Y A P+ Sbjct: 124 ITDLDEQMIEWFVPTGKPTHVLLSKCDKLNKSECKHTLEAVRKQLQQYDPALPDGNGESK 183 Query: 188 ---VIPTSSVKRKGIEVLRKAILETI 210 SS KR G+E +++ + Sbjct: 184 QLTAQLFSSTKRIGLEEADNTVIKWL 209 >gi|21241496|ref|NP_641078.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas axonopodis pv. citri str. 306] gi|294627677|ref|ZP_06706259.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667105|ref|ZP_06732330.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|24418373|sp|Q8PPG1|ENGB_XANAC RecName: Full=Probable GTP-binding protein EngB gi|21106841|gb|AAM35614.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306] gi|292598029|gb|EFF42184.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603115|gb|EFF46541.1| GTP-binding protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 214 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 13 SAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ-- 70 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K Sbjct: 71 -------PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKD 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + ++ + +LTK DKL +TL+K K + + V S R Sbjct: 124 YDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESR 183 Query: 197 KGIEVLRKAILETIN 211 +G++ LR + + Sbjct: 184 QGVDELRGIVGGWLG 198 >gi|309804144|ref|ZP_07698222.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 11V1-d] gi|309807084|ref|ZP_07701063.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 03V1-b] gi|309807950|ref|ZP_07701878.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 01V1-a] gi|309809256|ref|ZP_07703125.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners SPIN 2503V10-D] gi|312873935|ref|ZP_07733971.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2052A-d] gi|325911981|ref|ZP_08174383.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners UPII 143-D] gi|308163727|gb|EFO65996.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 11V1-d] gi|308166514|gb|EFO68714.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 03V1-b] gi|308168801|gb|EFO70891.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LactinV 01V1-a] gi|308170369|gb|EFO72393.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners SPIN 2503V10-D] gi|311090484|gb|EFQ48892.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2052A-d] gi|325476166|gb|EGC79330.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners UPII 143-D] Length = 195 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 104/197 (52%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+ PEIA SGRSNVGKSSLIN ++NR+NLARTS PG+TQ LNF++ Sbjct: 8 FVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTLNFYLV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA+ K+ +G +I YL R+ L+ + LL+D RH Sbjct: 68 N---------TDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++F++ + +V TKIDKL + + K + + + +P SS Sbjct: 119 PTVDDINMFNYALCLNIPILVVATKIDKLKKSAIGQLKSKIGLSL-DLTQSQVTFLPFSS 177 Query: 194 VKRKGIEVLRKAILETI 210 + I+ + I +I Sbjct: 178 ETKINIDKFWQWIENSI 194 >gi|303289114|ref|XP_003063845.1| hypothetical protein MICPUCDRAFT_53567 [Micromonas pusilla CCMP1545] gi|226454913|gb|EEH52218.1| hypothetical protein MICPUCDRAFT_53567 [Micromonas pusilla CCMP1545] Length = 526 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 100/211 (47%), Gaps = 13/211 (6%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 KSA +L+ + P PEIA GRSNVGKSSL+N+L RK++A+TS PG+TQ Sbjct: 314 VKSA-KYLQTCVRVQDCPPPNFPEIAVIGRSNVGKSSLVNLLTGRKDVAKTSKNPGKTQT 372 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +N F + LVD+PGYG+A AP++ W YL ER L V LL Sbjct: 373 INHF------EMITGDGKWYLVDLPGYGFANAPERLRKKWALFTREYLLERENLLAVMLL 426 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL------SPTTAQETLEKTKYLIRNY 181 ID +++D + FL + + IV TK+DK +E +E + Y Sbjct: 427 IDSTVEPQRLDLECLEFLGENDIPVSIVFTKVDKKRKVKSGKRAKPEENVEAFCREVSEY 486 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 P +I TSS G L + + Sbjct: 487 WEEMPPMIFTSSKTGDGKAALLNHVATLRQF 517 >gi|331003806|ref|ZP_08327298.1| GTP-binding protein engB [Lachnospiraceae oral taxon 107 str. F0167] gi|330411998|gb|EGG91395.1| GTP-binding protein engB [Lachnospiraceae oral taxon 107 str. F0167] Length = 197 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 104/189 (55%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P PEI F+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +N++ D Sbjct: 16 SKFPDNKEPEIVFAGKSNVGKSSLINALMNRKSLARTSGKPGKTQTINYYKVND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA A + WG +I RYL ++C++LLID RH + D+ + Sbjct: 70 ---DLYFVDLPGYGYANANLATKEKWGKMIERYLHTSKQIKCIFLLIDIRHEPGKNDKQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ S I+ TK+DKL + + ++ + + +IP SS ++G E Sbjct: 127 YDWIVYNGYSPVIIATKLDKLKRSQIAKCVKAVREGLGLPKEGV--LIPFSSETKQGREE 184 Query: 202 LRKAILETI 210 + + I + Sbjct: 185 VYEFIENLL 193 >gi|304437031|ref|ZP_07396994.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369982|gb|EFM23644.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 207 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 5/210 (2%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + TK+A +L P+ P +AF GRSNVGKSSLIN L + LA S Sbjct: 1 MSEPVVITKAA--YLASAVRRDQYPEEQRPAVAFIGRSNVGKSSLINSLTRIRQLAHVSG 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ +NF+ + + LVD+PGYGYA+A +++ +W I Y Sbjct: 59 KPGKTQTINFYELLMRIDGGEERHPVHLVDLPGYGYAKAARESRKTWAKFIEEYFLHAEN 118 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L V LL+D RH D+ +F +L + ++ TK DKL T Q+ L + R Sbjct: 119 LHFVCLLLDIRHAPMPSDRKMFEWLVSHDIPVLVIATKADKLGRTARQKQLSLMR---RT 175 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++P S K +G L + E + Sbjct: 176 LDVPDLSILPYSVPKNEGRTELLDVMKEYL 205 >gi|258544865|ref|ZP_05705099.1| ribosome biogenesis GTP-binding protein YsxC [Cardiobacterium hominis ATCC 15826] gi|258519888|gb|EEV88747.1| ribosome biogenesis GTP-binding protein YsxC [Cardiobacterium hominis ATCC 15826] Length = 204 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 102/197 (51%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F L EIAF+GRSN GKSS +N L N+K LAR S PGRTQ +N+F Sbjct: 10 FAFSANREDQLAADARIEIAFAGRSNAGKSSALNTLTNQKALARVSRTPGRTQLINYFAL 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA P++ W L+ RYL R+ LR + LL+D RH Sbjct: 70 --------PEAGCYLVDLPGYGYAEVPEQMRAHWQALLGRYLLTRAVLRGIVLLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D + ++ + I+LTK DKLS A + L+ + + N+ V SS Sbjct: 122 MKDLDIRMLECCAERQLPAHILLTKADKLSRGAAGKQLQAVRGELANWHAPF-SVQMFSS 180 Query: 194 VKRKGIEVLRKAILETI 210 +K++G+ L + + + Sbjct: 181 LKKEGLPALVAQLDQWM 197 >gi|194367174|ref|YP_002029784.1| ribosome biogenesis GTP-binding protein YsxC [Stenotrophomonas maltophilia R551-3] gi|194349978|gb|ACF53101.1| GTP-binding protein HSR1-related [Stenotrophomonas maltophilia R551-3] Length = 202 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 +G LP E+AF+GRSN GKSS +N L + +LAR S PGRTQ L FF Sbjct: 15 SAHNMGQLPPDEGAEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQQLVFFQVT-- 72 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P W I RY R+ LR + +++D RH +K Sbjct: 73 -------PEAHLVDLPGYGYAKVPLDLQAHWQAFIDRYFRTRNALRGLVVVMDIRHPLKD 125 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + ++ ++ + +LTK DKLS + +TL+K + + + V S R Sbjct: 126 YDRQMLAYAVQRGLPAHALLTKADKLSRSQQMQTLQKVRKELHSSFGDTVSVQVFSGAAR 185 Query: 197 KGIEVLRKAILETIN 211 G++ R I + Sbjct: 186 TGVDEARGIIGGWLG 200 >gi|18400109|ref|NP_565543.1| EMB2001 (embryo defective 2001); GTP binding [Arabidopsis thaliana] gi|21903474|sp|O81004|Y2287_ARATH RecName: Full=GTP-binding protein At2g22870; AltName: Full=Protein EMBRYO DEFECTIVE 2001 gi|20197273|gb|AAC32434.2| putative nucleotide-binding protein [Arabidopsis thaliana] gi|21592880|gb|AAM64830.1| putative nucleotide-binding protein [Arabidopsis thaliana] gi|52354269|gb|AAU44455.1| hypothetical protein AT2G22870 [Arabidopsis thaliana] gi|55740571|gb|AAV63878.1| hypothetical protein At2g22870 [Arabidopsis thaliana] gi|330252273|gb|AEC07367.1| GTP-binding protein [Arabidopsis thaliana] Length = 300 Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 100/202 (49%), Gaps = 12/202 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ PK PEIA GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 105 FVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLV 164 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ W Y R +L CV LLID Sbjct: 165 N---------KSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDSLVCVLLLIDASVP 215 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ---ETLEKTKYLIRNYPTAHPEVIP 190 ++ID D ++L + V V TK DK+ T + E ++ + +IR HP I Sbjct: 216 PQKIDLDCANWLGRNNVPMTFVFTKCDKMKATKGKRPDENIKAFQQIIRENFKVHPPWIL 275 Query: 191 TSSVKRKGIEVLRKAILETINY 212 TSSV G + L + + NY Sbjct: 276 TSSVSGLGRDELLLHMSQLRNY 297 >gi|119943997|ref|YP_941677.1| GTPase EngB [Psychromonas ingrahamii 37] gi|166225972|sp|A1SRG3|ENGB_PSYIN RecName: Full=Probable GTP-binding protein EngB gi|119862601|gb|ABM02078.1| cell division checkpoint GTPase YihA [Psychromonas ingrahamii 37] Length = 218 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 16/212 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEI----GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLAR 57 F K+ FL P+I LP EIAF+GRSN GKSS +N L +K LAR Sbjct: 3 FQKIHFQKA--HFLISAPDIRHLDKHLPPESGIEIAFAGRSNAGKSSALNRLTRQKGLAR 60 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 TS PGRTQ +N F ++ L+D+PGYG+A+ P W + YL E Sbjct: 61 TSKTPGRTQLINVFEIEEGK---------RLIDLPGYGFAKVPLAMKLKWQKSLGEYLQE 111 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 R +L+ + +L+D R K++DQ + + + +LTK DKL + TL K + Sbjct: 112 RESLKGLVVLMDIRQPFKELDQQLIYWAIDADIPVLALLTKADKLKQGARKTTLLKMREE 171 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +N+ +V SS+K G+E+L + + Sbjct: 172 AKNF-EGDVQVELFSSLKGIGLEMLEQKVTSW 202 >gi|332533754|ref|ZP_08409612.1| GTP-binding protein EngB [Pseudoalteromonas haloplanktis ANT/505] gi|332036809|gb|EGI73271.1| GTP-binding protein EngB [Pseudoalteromonas haloplanktis ANT/505] Length = 222 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 9/196 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDITKLPADTGIEVAFAGRSNAGKSSALNALTDQK-LARTSKTPGRTQLINTFDL 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + M L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AD-------VDDMRLIDLPGYGFAKVPIEMKKKWQKSLGEYLQKRQSLKGIVILMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+D+ ++ + +LTK DKL + + + + + + V SS Sbjct: 125 LKDLDRDLINWAIGSEIPVLALLTKADKLKQGPRKSQVLQVRREL-STLDGDITVHAFSS 183 Query: 194 VKRKGIEVLRKAILET 209 +K G+ + K + E Sbjct: 184 LKGTGLPEVAKKLDEW 199 >gi|259500683|ref|ZP_05743585.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners DSM 13335] gi|302191373|ref|ZP_07267627.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners AB-1] gi|312871414|ref|ZP_07731509.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 3008A-a] gi|312872272|ref|ZP_07732342.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2062A-h1] gi|312875467|ref|ZP_07735470.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2053A-b] gi|325912884|ref|ZP_08175262.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners UPII 60-B] gi|259168067|gb|EEW52562.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners DSM 13335] gi|311088978|gb|EFQ47419.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2053A-b] gi|311092095|gb|EFQ50469.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 2062A-h1] gi|311093067|gb|EFQ51416.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners LEAF 3008A-a] gi|325477877|gb|EGC81011.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners UPII 60-B] Length = 195 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 104/197 (52%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+ PEIA SGRSNVGKSSLIN ++NR+NLARTS PG+TQ LNF++ Sbjct: 8 FVISAVSDKQYPQDDLPEIALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTLNFYLV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA+ K+ +G +I YL R+ L+ + LL+D RH Sbjct: 68 N---------TDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++F++ + +V TKIDKL + + K + + + +P SS Sbjct: 119 PTVDDINMFNYALCLNIPILVVATKIDKLKKSAIGQLESKIGLSL-DLTQSQVTFLPFSS 177 Query: 194 VKRKGIEVLRKAILETI 210 + I+ K I +I Sbjct: 178 ETKINIDKFWKWIENSI 194 >gi|256823704|ref|YP_003147667.1| GTP-binding protein HSR1-like [Kangiella koreensis DSM 16069] gi|256797243|gb|ACV27899.1| GTP-binding protein HSR1-related [Kangiella koreensis DSM 16069] Length = 207 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L G ++ LP E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N F Sbjct: 8 YLLGAAKLTQLPDDQGIEVAFAGRSNAGKSSALNTLTQQKSLARTSKTPGRTQLINVFTL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L+D+PGYGYA+ P+ W + RYL +R LR + LL+D RH Sbjct: 68 DDDR---------RLIDLPGYGYAKVPEAMKLQWQAELSRYLQQRKCLRGLVLLMDIRHF 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-YPTAHPEVIPTS 192 +K DQ++ + + + +L+K DKLS + + + K + +P A V S Sbjct: 119 LKDSDQEMLVWAAEVGLPVHCLLSKSDKLSQGAKSKAVLQCKKALSELHPKA--TVQAFS 176 Query: 193 SVKRKGIEVLRKAILET 209 S+KR G++ L + + Sbjct: 177 SLKRVGLDQLYAVLDQW 193 >gi|126664648|ref|ZP_01735632.1| predicted GTPase [Marinobacter sp. ELB17] gi|126630974|gb|EBA01588.1| predicted GTPase [Marinobacter sp. ELB17] Length = 213 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ F+ ++ P E+AF+GRSN GKSS +N + LARTS PGRT+ +N Sbjct: 13 NSARFMVSASKLNECPADIGAEVAFAGRSNAGKSSALNTITVNGKLARTSKTPGRTRLIN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF LVD+PGYGYAR + D W + YL++R LR + L++D Sbjct: 73 FFSLN--------RENARLVDLPGYGYARVSRDMKDDWQTHLGHYLNDRRCLRGLVLVMD 124 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + + DQ + + + I+ TK DKL A+ + + + + + +I Sbjct: 125 IRHPLTEFDQTMVQWCQHNTMPLMILATKSDKLKFGQAKTAMLGIRQKLNEF-SCVQHLI 183 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS + G++ R+A+ + + Sbjct: 184 MFSSSNKTGLDECRQALTQWL 204 >gi|77164078|ref|YP_342603.1| GTP-binding protein [Nitrosococcus oceani ATCC 19707] gi|254435111|ref|ZP_05048618.1| GTPase, putative [Nitrosococcus oceani AFC27] gi|119369224|sp|Q3JDM3|ENGB_NITOC RecName: Full=Probable GTP-binding protein EngB gi|76882392|gb|ABA57073.1| cell division checkpoint GTPase YihA [Nitrosococcus oceani ATCC 19707] gi|207088222|gb|EDZ65494.1| GTPase, putative [Nitrosococcus oceani AFC27] Length = 200 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 14/209 (6%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 ++++ K+ + + LP E+AF+GRSNVGKSS IN + LARTS PG Sbjct: 2 NSLYRKA--HYQGSAYTLSQLPPDEGMEVAFAGRSNVGKSSAINAITGIGGLARTSKTPG 59 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ +NFF LVD+PGYGYA+ P+ W + YL +R L Sbjct: 60 RTQMINFFQLDARR---------YLVDLPGYGYAKVPEAVKRQWQQTLSAYLEQRRALCG 110 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-YP 182 + L++D R + D + + + + +I+LTK DKL A + L+K ++ +P Sbjct: 111 IVLVVDIRRLYQPFDLQMLEWCRSRGLPVRILLTKSDKLKRGAANQALQKATTHLQEVFP 170 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETIN 211 A V S+V GIE ++ + E + Sbjct: 171 MA--RVQLFSAVNHTGIEAIQAQLDEWLG 197 >gi|308274309|emb|CBX30908.1| Probable GTP-binding protein engB [uncultured Desulfobacterium sp.] Length = 202 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 12/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F++ + P+ PEIAF+GRSNVGKSSLIN L+NRKNL +TS+ PGRTQ +N Sbjct: 4 KSAEFVKSAVKPSQYPEESQPEIAFAGRSNVGKSSLINTLLNRKNLVKTSSTPGRTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF+ D + VD+PGYGYA+ P +WG +I Y+ R TL+ V L++D Sbjct: 64 FFLIND---------TLGFVDIPGYGYAKVPAAVRKTWGTMIETYIQTRKTLKGVVLILD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R + +L+ + + +VLTK DKLS T +++ + ++ I Sbjct: 115 LRRIPGPEEITFMDWLNYYNIPFILVLTKADKLSKT---NQVKQHMIISKSLSIDKDNFI 171 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ + G + L AI + Sbjct: 172 IFSAKSKTGKKPLWDAIENLV 192 >gi|330957164|gb|EGH57424.1| GTP-binding protein YsxC [Pseudomonas syringae pv. maculicola str. ES4326] Length = 211 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFG 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDEDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDILMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFS 184 Query: 193 SVKRKGIEVLRKAILETI 210 + KR G+E + + + Sbjct: 185 APKRMGLEEAYTVLADWM 202 >gi|257481813|ref|ZP_05635854.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627989|ref|ZP_06460943.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646457|ref|ZP_06477800.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. aesculi str. 2250] gi|330866582|gb|EGH01291.1| GTP-binding protein YsxC [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330890983|gb|EGH23644.1| GTP-binding protein YsxC [Pseudomonas syringae pv. mori str. 301020] gi|330986811|gb|EGH84914.1| GTP-binding protein YsxC [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009448|gb|EGH89504.1| GTP-binding protein YsxC [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 211 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFG 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDEDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDLLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFS 184 Query: 193 SVKRKGIEVLRKAILETI 210 + KR G+E + + + Sbjct: 185 APKRMGLEEAYTVLADWM 202 >gi|237797956|ref|ZP_04586417.1| GTP-binding protein YsxC [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020807|gb|EGI00864.1| GTP-binding protein YsxC [Pseudomonas syringae pv. oryzae str. 1_6] Length = 211 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFG 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDEDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDLLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFS 184 Query: 193 SVKRKGIEVLRKAILETI 210 + KR G+E + + + Sbjct: 185 APKRMGLEEAYTVLADWM 202 >gi|121600875|ref|YP_994425.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei SAVP1] gi|124385977|ref|YP_001027926.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei NCTC 10229] gi|126449374|ref|YP_001083021.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei NCTC 10247] gi|217424868|ref|ZP_03456365.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 576] gi|226198239|ref|ZP_03793810.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei Pakistan 9] gi|238562954|ref|ZP_00439635.2| GTP-binding protein, EngB family [Burkholderia mallei GB8 horse 4] gi|251767488|ref|ZP_04820124.1| GTP-binding protein, EngB family [Burkholderia mallei PRL-20] gi|254174807|ref|ZP_04881468.1| GTP-binding protein, EngB family [Burkholderia mallei ATCC 10399] gi|254201208|ref|ZP_04907572.1| GTP-binding protein, EngB family [Burkholderia mallei FMH] gi|254206549|ref|ZP_04912900.1| GTP-binding protein, EngB family [Burkholderia mallei JHU] gi|254357088|ref|ZP_04973362.1| GTP-binding protein, EngB family [Burkholderia mallei 2002721280] gi|121229685|gb|ABM52203.1| conserved hypothetical protein [Burkholderia mallei SAVP1] gi|124293997|gb|ABN03266.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei NCTC 10229] gi|126242244|gb|ABO05337.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia mallei NCTC 10247] gi|147747102|gb|EDK54178.1| GTP-binding protein, EngB family [Burkholderia mallei FMH] gi|147752091|gb|EDK59157.1| GTP-binding protein, EngB family [Burkholderia mallei JHU] gi|148026152|gb|EDK84237.1| GTP-binding protein, EngB family [Burkholderia mallei 2002721280] gi|160695852|gb|EDP85822.1| GTP-binding protein, EngB family [Burkholderia mallei ATCC 10399] gi|217392324|gb|EEC32349.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei 576] gi|225929759|gb|EEH25775.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderia pseudomallei Pakistan 9] gi|238521637|gb|EEP85087.1| GTP-binding protein, EngB family [Burkholderia mallei GB8 horse 4] gi|243062565|gb|EES44751.1| GTP-binding protein, EngB family [Burkholderia mallei PRL-20] Length = 216 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 98/201 (48%), Gaps = 9/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 7 FFTTVNHLRDLPPTVQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSV 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL R L + L++D R Sbjct: 67 GPAAE-----PVAHLVDLPGYGYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP----EVI 189 + ++D+ + + +LTK DKL+ + L T+ + Y A V Sbjct: 122 LTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGYAGKLTVQ 181 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S++KR G++ I + Sbjct: 182 LFSALKRTGLDDAHALIESWV 202 >gi|306821418|ref|ZP_07455023.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550540|gb|EFM38526.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 195 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 11/195 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + P P IA +GRSNVGKSSLIN L+NRK+LAR S PG+T+ +NFF+ + Sbjct: 10 TSATDPKFYPDDNLPCIALAGRSNVGKSSLINSLLNRKSLARVSGTPGKTRTINFFIINE 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + LVD+PGYGYA+ K +SWG + Y S+ L+ V+LL+D RH K Sbjct: 70 ---------SFYLVDLPGYGYAKLSKTEQESWGKTMELYFSKSKNLKHVFLLLDIRHEPK 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D+ ++ + + I+ TK DK+S Q++ K ++ ++ P SS+ Sbjct: 121 ASDKQMYDYCKYYDIPVDIIATKSDKISRGAYQKSFSIMKKFLQIKEEI--KIFPISSLN 178 Query: 196 RKGIEVLRKAILETI 210 + GIE L + I Sbjct: 179 KSGIEELSNYMESVI 193 >gi|154482726|ref|ZP_02025174.1| hypothetical protein EUBVEN_00403 [Eubacterium ventriosum ATCC 27560] gi|149736321|gb|EDM52207.1| hypothetical protein EUBVEN_00403 [Eubacterium ventriosum ATCC 27560] Length = 195 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP EIAF+G+SNVGKSSLIN LVNRK LARTS+ PG+TQ +NF+ Sbjct: 16 SKLPDNQLCEIAFAGKSNVGKSSLINGLVNRKALARTSSQPGKTQTINFYNVN------- 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA K + WG +I RYL E L+ V+LLID RH D ++ Sbjct: 69 --KELYFVDLPGYGYANVSLKVKEQWGKMIERYLHESQVLKAVFLLIDIRHEPSANDVNM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK DK+ + Q+ ++ K + P +V+ S++ ++G + Sbjct: 127 YQWILANGYEPIIIATKADKIKRSQLQKHIKMIKTELNVVPGT--KVLTFSALTKQGKDE 184 Query: 202 LRKAILETI 210 + I E + Sbjct: 185 ILDLIEEIV 193 >gi|153806695|ref|ZP_01959363.1| hypothetical protein BACCAC_00966 [Bacteroides caccae ATCC 43185] gi|149131372|gb|EDM22578.1| hypothetical protein BACCAC_00966 [Bacteroides caccae ATCC 43185] Length = 201 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 97/205 (47%), Gaps = 12/205 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N Sbjct: 5 SAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYAR +K D +I Y+ ER + +++LID Sbjct: 65 FLIN---------KNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQNIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKMNVNAYLRELSKQWEELPPYFI 175 Query: 191 TSSVKRKGIEVLRKAIL---ETINY 212 +SS R G + I + INY Sbjct: 176 SSSENRTGRTEILNYIENINKEINY 200 >gi|225009961|ref|ZP_03700433.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C] gi|225005440|gb|EEG43390.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C] Length = 204 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 102/197 (51%), Gaps = 10/197 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + PK PE AF GRSNVGKSSLIN+L ++K+LA+TS PG+TQ +N Sbjct: 5 SAEFVMSNAHVEKCPKDPIPEYAFIGRSNVGKSSLINMLTSKKSLAKTSGRPGKTQLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F LVD+PGYGYAR K++ ++ I Y +R+ L C ++L+D Sbjct: 65 FKINQ---------NWFLVDLPGYGYARVSKRDKKTFQKYITEYFLKRTQLVCAFVLVDI 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVI 189 RH + +D D ++ + + + I+ TK DKL P + + + L PE Sbjct: 116 RHEPQPVDLDFMRWMGENEIPFCIIFTKADKLKPAIIEANTKAYNEKLTEEIFELAPEHF 175 Query: 190 PTSSVKRKGIEVLRKAI 206 TSS K G E L I Sbjct: 176 ITSSSKHLGKEELLGYI 192 >gi|304388325|ref|ZP_07370439.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria meningitidis ATCC 13091] gi|304337687|gb|EFM03842.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria meningitidis ATCC 13091] Length = 211 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 7 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHTRLAYVSKTPGRTQHIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 66 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 117 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 176 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + Sbjct: 177 QLFSSLKKQGIDEANRTV 194 >gi|255087758|ref|XP_002505802.1| predicted protein [Micromonas sp. RCC299] gi|226521072|gb|ACO67060.1| predicted protein [Micromonas sp. RCC299] Length = 531 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 97/205 (47%), Gaps = 12/205 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PE+A GRSNVGKSSL+N+L NRK++A+TS PG+T+ +N F Sbjct: 306 FMQACVRVKDCPPPKHPEVAVIGRSNVGKSSLVNMLTNRKDIAKTSKNPGKTRTINHF-- 363 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+A AP++ W YL R L V LLID Sbjct: 364 ----EMITGDGTWYFVDLPGYGFANAPEEARRKWAEFTREYLLGRPNLLSVMLLIDSTVK 419 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL------SPTTAQETLEKTKYLIRNYPTAHPE 187 +++D + FL + + +V TK+DK +E +E + Y P Sbjct: 420 PQRLDLECLEFLGENNIPVTVVFTKVDKKRKVKSGKRANPEENVEAFCREVSEYWDELPP 479 Query: 188 VIPTSSVKRKGIEVLRKAILETINY 212 +I TSS G + + + + Sbjct: 480 MIFTSSKTGDGKQAVLNHVATLRQF 504 >gi|71736746|ref|YP_272563.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. phaseolicola 1448A] gi|119369231|sp|Q48PV6|ENGB_PSE14 RecName: Full=Probable GTP-binding protein EngB gi|71557299|gb|AAZ36510.1| GTP-binding protein XF1430 [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322197|gb|EFW78293.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. glycinea str. B076] gi|320331848|gb|EFW87786.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. glycinea str. race 4] gi|330872974|gb|EGH07123.1| GTP-binding protein YsxC [Pseudomonas syringae pv. glycinea str. race 4] Length = 211 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFG 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDEDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDLLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQTEIRKGWGDAVSIQLFS 184 Query: 193 SVKRKGIEVLRKAILETI 210 + KR G+E + + + Sbjct: 185 APKRMGLEEAYTVLADWM 202 >gi|332991520|gb|AEF01575.1| GTP-binding protein YsxC [Alteromonas sp. SN2] Length = 205 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 12/206 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 + +TK+ F P+I L E+AF+GRSN GKSS +N L +KNLARTS PGR Sbjct: 2 SYYTKAK--FFTSAPDIRHLKDDSGIEVAFAGRSNAGKSSALNTLTRQKNLARTSKTPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F ++ LVD+PGYG+A+ P + W + YL +R +L+ + Sbjct: 60 TQLINVFNLEEDR---------RLVDLPGYGFAQVPLAMKNKWQQALGEYLQKRKSLKGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +L+D RH K +DQD+ + + +LTK DKL + L + + Sbjct: 111 VVLMDIRHPFKDLDQDLIHWAVDSNIPVLALLTKSDKLKSGKRKAQLLMAQEAALAF-MG 169 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 V SS+ R+G+ L K + + + Sbjct: 170 DVTVNTFSSLNRQGLPELEKVLNKWL 195 >gi|157373236|ref|YP_001471836.1| GTPase EngB [Shewanella sediminis HAW-EB3] gi|189037191|sp|A8FPD5|ENGB_SHESH RecName: Full=Probable GTP-binding protein EngB gi|157315610|gb|ABV34708.1| GTP-binding protein, HSR1-related [Shewanella sediminis HAW-EB3] Length = 220 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 16/211 (7%) Query: 5 TIFTKSAWIFLRGVPEI----GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 F K+ FL P+I LP EIAF+GRSN GKSS +N+L ++K+LARTS Sbjct: 6 IDFRKAK--FLISAPDIAHLNEHLPGDAGVEIAFAGRSNAGKSSALNLLTDQKSLARTSR 63 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ +N F + LVD+PGYG+A+ P W + YL ER Sbjct: 64 TPGRTQLINIFELDENR---------RLVDLPGYGFAQVPLALKKKWQESLGEYLQERQC 114 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L + +L+D RH +K +D + ++ + + +LTK DKL + + + + + + + Sbjct: 115 LGGMVVLMDIRHPLKDLDMQMIAWALESEIPVLALLTKADKLKQSERMKMVNEVRKHLGD 174 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + +V P SS+K G + + E + Sbjct: 175 FDD-RVKVEPFSSLKGIGKAKVLGILNEWCH 204 >gi|296840815|ref|ZP_06863497.2| ribosome biogenesis GTP-binding protein YsxC [Neisseria polysaccharea ATCC 43768] gi|296839902|gb|EFH23840.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria polysaccharea ATCC 43768] Length = 210 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 73/193 (37%), Positives = 102/193 (52%), Gaps = 11/193 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 7 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 66 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVKLLGDYLQQRKQLIGLILIMD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 117 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 176 Query: 189 IPTSSVKRKGIEV 201 SS+K++GI+ Sbjct: 177 QLFSSLKKQGIDE 189 >gi|242036437|ref|XP_002465613.1| hypothetical protein SORBIDRAFT_01g042170 [Sorghum bicolor] gi|241919467|gb|EER92611.1| hypothetical protein SORBIDRAFT_01g042170 [Sorghum bicolor] Length = 310 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 93/206 (45%), Gaps = 12/206 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++ PK PE A GRSNVGKSSLIN L RK A TS PG+TQ +N Sbjct: 108 KEAEFVKSSARARDCPKDDRPEFAVLGRSNVGKSSLINALTRRKEAALTSKKPGKTQTIN 167 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A A + W Y R TL V LLID Sbjct: 168 HFLVN---------KSWYLVDLPGYGFAAASQSARMDWSSFTKGYFLNRDTLVGVLLLID 218 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT---AQETLEKTKYLIRNYPTAHP 186 ++ID D ++L + + V TK DK+ E +++ + I P Sbjct: 219 ASIPPQKIDLDCANWLGRNNIGLTFVFTKCDKVKKGKGGRPDENIKQFQETISGLYPDPP 278 Query: 187 EVIPTSSVKRKGIEVLRKAILETINY 212 I TSSV G + L + + NY Sbjct: 279 PWIMTSSVTGLGRDGLLLHMSQLRNY 304 >gi|291520784|emb|CBK79077.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Coprococcus catus GD/7] Length = 204 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 65/186 (34%), Positives = 104/186 (55%), Gaps = 11/186 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PE+AFSG+SNVGKSSLIN L+NRK AR S PG+TQ +N++ D Sbjct: 16 STLPENQHPEVAFSGKSNVGKSSLINGLMNRKAYARVSQQPGKTQTINYYNVND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + +VD+PGYG+A + WG +I YL + LR V+LL+D RH D+ + Sbjct: 70 ---EIYIVDLPGYGFANVSQAVKAKWGKMIENYLRKSRQLRMVFLLVDIRHEPSANDKHM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 +S++ + I+ TK+DK+ + Q+ L+ + + ++P S+V ++G + Sbjct: 127 YSWIIENGFYPAIIATKLDKIKRSQVQKQLKLIREGLN--VAEGTPIVPYSAVTKQGRDE 184 Query: 202 LRKAIL 207 + + I Sbjct: 185 IWELIE 190 >gi|289674483|ref|ZP_06495373.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. syringae FF5] gi|302188970|ref|ZP_07265643.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. syringae 642] gi|119369236|sp|Q4ZZT0|ENGB_PSEU2 RecName: Full=Probable GTP-binding protein EngB gi|330938833|gb|EGH42352.1| GTP-binding protein YsxC [Pseudomonas syringae pv. pisi str. 1704B] gi|330952068|gb|EGH52328.1| GTP-binding protein YsxC [Pseudomonas syringae Cit 7] gi|330977285|gb|EGH77240.1| GTP-binding protein YsxC [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 211 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFG 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDEDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDVLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFS 184 Query: 193 SVKRKGIEVLRKAILETI 210 + KR G+E + + + Sbjct: 185 APKRMGLEEAYTVLADWM 202 >gi|66043539|ref|YP_233380.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. syringae B728a] gi|63254246|gb|AAY35342.1| GTP-binding protein, HSR1-related [Pseudomonas syringae pv. syringae B728a] Length = 235 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 39 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFG 97 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 98 LDEDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRH 148 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 149 PMTDFDVLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFS 208 Query: 193 SVKRKGIEVLRKAILETI 210 + KR G+E + + + Sbjct: 209 APKRMGLEEAYTVLADWM 226 >gi|317401519|gb|EFV82149.1| GTP-binding protein engB [Achromobacter xylosoxidans C54] Length = 207 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 4/197 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + LP PE+ F GRSN GKS+ IN+L N++ LA +S PGRT+ +N F Sbjct: 9 FLTSAARLDQLPPPDAPEVCFVGRSNAGKSTAINVLCNQRRLAFSSKTPGRTRLINMFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + + ++ LVD+PGYGYA + + W ++ YL +R +L + LLID R G Sbjct: 69 PDPLDPEGHI--GYLVDLPGYGYASVARDEKEKWADILGGYLRDRESLAGIVLLIDIRRG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V ++D+ + +F+ +LTK DKL T+ + + + H IP S+ Sbjct: 127 VTELDRRLANFIAPTGRPVLALLTKADKLPYGQRVRTVFSVRKDLADIGALHT--IPFSA 184 Query: 194 VKRKGIEVLRKAILETI 210 +R G+E I I Sbjct: 185 PERIGLEEAGAHIENWI 201 >gi|289207228|ref|YP_003459294.1| ribosome biogenesis GTP-binding protein YsxC [Thioalkalivibrio sp. K90mix] gi|288942859|gb|ADC70558.1| ribosome biogenesis GTP-binding protein YsxC [Thioalkalivibrio sp. K90mix] Length = 203 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 10/207 (4%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 F ++A F++GV ++ LP+ EIAF+GRSN GKSS +N L RK LAR PG Sbjct: 2 EPRFRETA--FIKGVAQVEQLPEDDGIEIAFAGRSNAGKSSALNALCGRKALARVGRTPG 59 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ +N F A LVD+PGYGYA+ W L+ YL R L Sbjct: 60 RTQEINLFALP-------PDEAWRLVDLPGYGYAKVSAGQRQHWDRLLGDYLQSRECLAG 112 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 + L++D R + ++D+ + ++ + +LTK DKLS A + L T+ + Sbjct: 113 LVLIMDIRRPLTELDRQLLEWVPLERCQLHCLLTKADKLSRQAADKQLHATQRELEGL-G 171 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETI 210 + SS+K +G++ LR + E + Sbjct: 172 IEATLQTFSSLKNQGVDDLRGLLTEWL 198 >gi|257063740|ref|YP_003143412.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Slackia heliotrinireducens DSM 20476] gi|256791393|gb|ACV22063.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Slackia heliotrinireducens DSM 20476] Length = 201 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 102/197 (51%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F I LPK+ PEI+F+GRSNVGKSSL+N L NRK LA+ S+ PG+T +NFF Sbjct: 8 FKAAYGTINQLPKSVRPEISFAGRSNVGKSSLLNKLFNRKGLAKVSSTPGKTATINFFTA 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 VD+PGYGYA+ K W GLI Y + V LID RH Sbjct: 68 SSAD----------FVDLPGYGYAKVSKTERQRWSGLIEGYFHQDRRFALVVSLIDIRHA 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++D + FL ++ + + +VLTK DKLS + + + + P +I SS Sbjct: 118 ASELDVQMIDFLMEEGLPFVVVLTKADKLSKSQVNRQVAAIRKQLGFEPE--DPIIAVSS 175 Query: 194 VKRKGIEVLRKAILETI 210 K GI+VL++ I I Sbjct: 176 EKGTGIDVLKRTIEYAI 192 >gi|58583504|ref|YP_202520.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428098|gb|AAW77135.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 258 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 64 SAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ-- 121 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K Sbjct: 122 -------PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKD 174 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + ++ + +LTK DKL +TL+K K + + V S R Sbjct: 175 YDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGQSR 234 Query: 197 KGIEVLRKAILETIN 211 +G++ LR + + Sbjct: 235 QGVDELRGIVGGWLG 249 >gi|84625320|ref|YP_452692.1| GTPase EngB [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166710592|ref|ZP_02241799.1| GTPase EngB [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575232|ref|YP_001912161.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas oryzae pv. oryzae PXO99A] gi|119369280|sp|Q2NZ59|ENGB_XANOM RecName: Full=Probable GTP-binding protein EngB gi|119369281|sp|Q5GVY6|ENGB_XANOR RecName: Full=Probable GTP-binding protein EngB gi|238689455|sp|B2SNS8|ENGB_XANOP RecName: Full=Probable GTP-binding protein EngB gi|84369260|dbj|BAE70418.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519684|gb|ACD57629.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 207 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 13 SAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ-- 70 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K Sbjct: 71 -------PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKD 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + ++ + +LTK DKL +TL+K K + + V S R Sbjct: 124 YDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGQSR 183 Query: 197 KGIEVLRKAILETIN 211 +G++ LR + + Sbjct: 184 QGVDELRGIVGGWLG 198 >gi|291612510|ref|YP_003522667.1| ribosome biogenesis GTP-binding protein YsxC [Sideroxydans lithotrophicus ES-1] gi|291582622|gb|ADE10280.1| ribosome biogenesis GTP-binding protein YsxC [Sideroxydans lithotrophicus ES-1] Length = 204 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 103/204 (50%), Gaps = 16/204 (7%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F+++A F V + LP G E+AF GRSN GKSS IN L N LA TS PGRT Sbjct: 3 LFSQAA--FYTTVNHMKDLPLHGGKEVAFVGRSNAGKSSAINTLANHTRLAFTSKTPGRT 60 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 QHLN+F + + LVD+PGYGYA+ P W L+ YL R L + Sbjct: 61 QHLNYFSLGNNN---------YLVDLPGYGYAKVPPDVQAHWEHLLSEYLQTREELCGLV 111 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +++D RH + + DQ + + I+LTK DKLS + +TL K + + Sbjct: 112 VIMDARHPLTERDQGMLGWFAPTGKPIHILLTKSDKLSRQQSTQTLRDVKEFLAEH---F 168 Query: 186 PEV--IPTSSVKRKGIEVLRKAIL 207 P+ SS+K+ G++ I Sbjct: 169 PQCTAQLFSSLKKAGMDEAEAMIA 192 >gi|254804379|ref|YP_003082600.1| GTP-binding protein [Neisseria meningitidis alpha14] gi|254667921|emb|CBA04098.1| GTP-binding protein [Neisseria meningitidis alpha14] Length = 221 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 64 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 115 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + Sbjct: 175 QLFSSLKKQGIDEANRTV 192 >gi|325298117|ref|YP_004258034.1| GTP-binding protein engB [Bacteroides salanitronis DSM 18170] gi|324317670|gb|ADY35561.1| GTP-binding protein engB [Bacteroides salanitronis DSM 18170] Length = 200 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 109/201 (54%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + P+ PE AF GRSNVGKSSLIN+L N LA TS+ PG+T +N Sbjct: 5 SAKFVISNSRADMCPEGNLPEYAFIGRSNVGKSSLINMLTNHSKLAMTSSTPGKTLLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ + + LVD+PGYGYA+ KK ++ +I Y+ ER + C+++LID Sbjct: 65 FLINN---------SWYLVDLPGYGYAQRGKKVMEQIKNIIQHYVLERMQMTCLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + +V + +V TK DK + Q+ +E+ ++ P Sbjct: 116 RLEPQKIDLEFIEWLGENSVPFALVFTKADKQNIVKTQQNVERFLNTLKEQWEELPAYFI 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 TS+ K+ G + + I ++IN Sbjct: 176 TSAEKKTGRKEVLDYI-DSIN 195 >gi|260170500|ref|ZP_05756912.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D2] gi|315918844|ref|ZP_07915084.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692719|gb|EFS29554.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 201 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 97/201 (48%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L NRK LA TS PG+T +N Sbjct: 5 SAEFVISNTDVRKCPAGIFPEYAFIGRSNVGKSSLINMLTNRKGLAMTSATPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F LVD+PGYGYAR +K D +I Y+ ER + +++LID Sbjct: 65 FFIN---------KNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKININAYLRELSKQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS R G + I E IN Sbjct: 176 SSSEDRMGRTEILNYI-ENIN 195 >gi|254670022|emb|CBA04791.1| GTP-binding protein [Neisseria meningitidis alpha153] gi|261393144|emb|CAX50756.1| putative GTP-binding protein EngB [Neisseria meningitidis 8013] gi|308389904|gb|ADO32224.1| GTPase EngB [Neisseria meningitidis alpha710] gi|325143809|gb|EGC66125.1| GTP-binding protein [Neisseria meningitidis M01-240013] gi|325201549|gb|ADY97003.1| GTP-binding protein [Neisseria meningitidis M01-240149] gi|325206723|gb|ADZ02176.1| GTP-binding protein [Neisseria meningitidis M04-240196] gi|325207530|gb|ADZ02982.1| GTP-binding protein [Neisseria meningitidis NZ-05/33] Length = 209 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 64 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 115 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + Sbjct: 175 QLFSSLKKQGIDEANRTV 192 >gi|262198758|ref|YP_003269967.1| ribosome biogenesis GTP-binding protein YsxC [Haliangium ochraceum DSM 14365] gi|262082105|gb|ACY18074.1| ribosome biogenesis GTP-binding protein YsxC [Haliangium ochraceum DSM 14365] Length = 198 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 104/201 (51%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + P PEIAF+GRSNVGKSSLIN LV+ LARTS PGRT+ +N Sbjct: 4 KSAEFVTSAAKPSQFPAPTLPEIAFAGRSNVGKSSLINTLVDIAGLARTSRTPGRTRLVN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F + M VD+PGYGYA+ P SW LI YLS+R+TLR + +LID Sbjct: 64 WFQI-----VPAKGKPMLFVDLPGYGYAKVPTAMRASWRPLIEDYLSDRATLRALVVLID 118 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R G ++ + D+ +L V V+TK DKLS + + + + I Sbjct: 119 ARRGAQEEEIDLLDWLRSAEVPAITVVTKADKLSKNKRKPAAAEIQRDLGLRR----PPI 174 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS+ G+ L +AI + Sbjct: 175 LFSSLSGDGLNDLWQAIARKV 195 >gi|21674964|ref|NP_663029.1| GTPase EngB [Chlorobium tepidum TLS] gi|25452938|sp|Q8KAK5|ENGB_CHLTE RecName: Full=Probable GTP-binding protein EngB gi|21648196|gb|AAM73371.1| GTP-binding protein [Chlorobium tepidum TLS] Length = 192 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 99/193 (51%), Gaps = 13/193 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + LP G PEI F GRSNVGKSSL+N L RK LA+TS+ PG+T+ +N+F+ Sbjct: 8 FFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYGYA+ + +SWG L+ Y+ +R + V LL+D RH Sbjct: 68 ND---------NLYFVDLPGYGYAKVGQGERESWGKLLTGYIQKRGEIALVVLLVDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ FLD + IVLTK DKL + + N ++ SS Sbjct: 119 GMASDLEMMEFLDYCGRPFGIVLTKWDKLKQAEKSKASRTIESCAPNAR----FIVNYSS 174 Query: 194 VKRKGIEVLRKAI 206 + G + L +I Sbjct: 175 LSGSGRDRLLASI 187 >gi|162147918|ref|YP_001602379.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter diazotrophicus PAl 5] gi|209542535|ref|YP_002274764.1| ribosome biogenesis GTP-binding protein YsxC [Gluconacetobacter diazotrophicus PAl 5] gi|161786495|emb|CAP56077.1| GTP-binding protein engB [Gluconacetobacter diazotrophicus PAl 5] gi|209530212|gb|ACI50149.1| GTP-binding protein HSR1-related [Gluconacetobacter diazotrophicus PAl 5] Length = 223 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 85/187 (45%), Positives = 109/187 (58%), Gaps = 9/187 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F G ++ LP G PEIAF+GRSNVGKSSLIN L R+ LAR S+ PGRT+ LNFF Sbjct: 31 FFFGAQKLEQLPPPGAPEIAFAGRSNVGKSSLINALTGRRALARASSEPGRTKQLNFFDL 90 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVDMPGYGYARA K + W G++ YL R TL+ V LL+D R Sbjct: 91 G---------GRLTLVDMPGYGYARAAKDVKEDWQGMMFAYLRGRPTLQRVILLLDSRIE 141 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+++ + LD+ AV++QIVLTK D P + + L R +P A+P TSS Sbjct: 142 LKASDREIMTLLDRAAVTFQIVLTKCDAPRPGALEAKRSQAADLARQHPAAYPGTFATSS 201 Query: 194 VKRKGIE 200 GI Sbjct: 202 DTGLGIP 208 >gi|222100001|ref|YP_002534569.1| GTP-binding protein engB [Thermotoga neapolitana DSM 4359] gi|254783217|sp|B9K8C0|ENGB_THENN RecName: Full=Probable GTP-binding protein EngB gi|221572392|gb|ACM23204.1| GTP-binding protein engB [Thermotoga neapolitana DSM 4359] Length = 195 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 12/192 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ G P E+AF GRSNVGKSSL+N L NRK +A S PG+T+ +NF++ Sbjct: 9 VKVAKTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-IAYVSKTPGKTRSINFYLVN 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 VD+PGYGYA+ KK W L+ Y + R +L+ V+LL+D R Sbjct: 68 SR---------YYFVDLPGYGYAKVSKKERVQWKKLVEDYFTNRWSLQMVFLLVDGRIPP 118 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 ++ D + +L V + IVLTK+DK+ + ++ L++ K Y +IPTSSV Sbjct: 119 QETDLMMVEWLKSLNVPFTIVLTKMDKVKMSERKKKLDEHKKAFSKYGEY--TIIPTSSV 176 Query: 195 KRKGIEVLRKAI 206 +GI+ L I Sbjct: 177 TGEGIDDLLNLI 188 >gi|325922584|ref|ZP_08184338.1| cell division checkpoint GTPase YihA [Xanthomonas gardneri ATCC 19865] gi|325546934|gb|EGD18034.1| cell division checkpoint GTPase YihA [Xanthomonas gardneri ATCC 19865] Length = 207 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 95/195 (48%), Gaps = 9/195 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 13 SAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ-- 70 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K Sbjct: 71 -------PERCLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKD 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + ++ + +LTK DKL +TL+K K + + V S R Sbjct: 124 YDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESR 183 Query: 197 KGIEVLRKAILETIN 211 +G++ LR + + Sbjct: 184 QGVDELRGIVGGWLG 198 >gi|312885959|ref|ZP_07745587.1| ribosome biogenesis GTP-binding protein YsxC [Mucilaginibacter paludis DSM 18603] gi|311301496|gb|EFQ78537.1| ribosome biogenesis GTP-binding protein YsxC [Mucilaginibacter paludis DSM 18603] Length = 215 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ LP A PE AF GRSNVGKSSLIN+LV++K LA+TS PG+TQ +N F+ Sbjct: 8 FVCSNTQVSKLPPAVKPEYAFIGRSNVGKSSLINMLVDKKGLAKTSQTPGKTQLINHFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYAR K + W I YL +R +L+ V++LID R Sbjct: 68 ND---------NWYLVDLPGYGYARISKSKKEDWNKFIRTYLDKRESLQTVFVLIDSRLE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ID + ++L +K +S+ ++ TK DK S + + K + P + TS+ Sbjct: 119 PQKIDLEFCNWLGEKGLSFALIFTKADKQSRVKTDQNVSAFKKALLTTFEDIPTIFITSA 178 Query: 194 VKRKGIEVLRKAI 206 + G E + + Sbjct: 179 ELQTGREEVLNFV 191 >gi|218781246|ref|YP_002432564.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01] gi|226741189|sp|B8FLF0|ENGB_DESAA RecName: Full=Probable GTP-binding protein EngB gi|218762630|gb|ACL05096.1| small GTP-binding protein [Desulfatibacillum alkenivorans AK-01] Length = 205 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 12/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + G P PEIAF+GRSNVGKSSLIN L+ RK L +TS+ PGRTQ LN Sbjct: 4 KSAKFMSSATKPGNYPPPELPEIAFAGRSNVGKSSLINSLLKRKKLVKTSSTPGRTQLLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + ++ VD+PGYGYA+ K+ WG +I +++ R TL V L++D Sbjct: 64 FFEVNE---------SLVFVDLPGYGYAKVSKEMRKKWGQMIETFITTRKTLHGVVLILD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R +++ ++ D + +V TK DK S Q L + K + + + Sbjct: 115 LRRIPGGQERENLAWFDLNNIPVILVATKADKFSR---QRQLAQQKEMAKALGIPLDVIH 171 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ +G + L ++IL+ Sbjct: 172 VFSAKTGQGRDELWESILDLC 192 >gi|18310371|ref|NP_562305.1| GTPase EngB [Clostridium perfringens str. 13] gi|110800363|ref|YP_696084.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium perfringens ATCC 13124] gi|168207810|ref|ZP_02633815.1| GTP-binding protein [Clostridium perfringens E str. JGS1987] gi|168215329|ref|ZP_02640954.1| GTP-binding protein [Clostridium perfringens CPE str. F4969] gi|168217820|ref|ZP_02643445.1| GTP-binding protein [Clostridium perfringens NCTC 8239] gi|169342290|ref|ZP_02863368.1| GTP-binding protein [Clostridium perfringens C str. JGS1495] gi|24418379|sp|Q8XKK5|ENGB_CLOPE RecName: Full=Probable GTP-binding protein EngB gi|119369185|sp|Q0TQK6|ENGB_CLOP1 RecName: Full=Probable GTP-binding protein EngB gi|18145051|dbj|BAB81095.1| probable GTP binding protein [Clostridium perfringens str. 13] gi|110675010|gb|ABG83997.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium perfringens ATCC 13124] gi|169299617|gb|EDS81676.1| GTP-binding protein [Clostridium perfringens C str. JGS1495] gi|170660856|gb|EDT13539.1| GTP-binding protein [Clostridium perfringens E str. JGS1987] gi|170713286|gb|EDT25468.1| GTP-binding protein [Clostridium perfringens CPE str. F4969] gi|182380168|gb|EDT77647.1| GTP-binding protein [Clostridium perfringens NCTC 8239] Length = 197 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P PEIAF GRSNVGKSS+IN L NR+ LA+ S PG+T+ +NFF+ Sbjct: 8 FIISAVKREQYPDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRLINFFLL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ KK SWG I RYL R L+ V LL+DCRH Sbjct: 68 N---------KDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ ++ ++ TK DK+S ++ + K + P H ++ SS Sbjct: 119 PTADDVQMYEWIKHYGYEVVVIATKSDKISNNQIGKSEKLIKETLG-LPKDH-KLKFFSS 176 Query: 194 VKRKGIEVLRKAILETI 210 + +KG + L + + + Sbjct: 177 LNKKGKDELVDYLFDDL 193 >gi|226942008|ref|YP_002797082.1| ribosome biogenesis GTP-binding protein YsxC [Laribacter hongkongensis HLHK9] gi|254783201|sp|C1D5Q6|ENGB_LARHH RecName: Full=Probable GTP-binding protein EngB gi|226716935|gb|ACO76073.1| engB, yihA, ysxC [Laribacter hongkongensis HLHK9] Length = 222 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 102/203 (50%), Gaps = 12/203 (5%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F + F V + LP EIAF GRSN GKSS IN L NR LA S PGR Sbjct: 2 PLFQNA--TFFTTVNHLRDLPPTS-AEIAFVGRSNAGKSSAINALANRTRLAYVSKTPGR 58 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQH+NFF + LVD+PGYGYA P+ W L+ RYL R +L + Sbjct: 59 TQHINFFRLASHFD-------YFLVDLPGYGYAEVPESVRAHWVELLGRYLQTRESLIGL 111 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L++D RH +K++D + F + I+L+K DK++ +TL + + YP Sbjct: 112 LLIMDARHPLKELDMRMLDFFRMRGQPVHILLSKSDKMNRQEQNKTLATVRQALAGYP-- 169 Query: 185 HPEVIPTSSVKRKGIEVLRKAIL 207 + SS K++G+E + + Sbjct: 170 QVSIQLFSSSKKQGLEQVETVVA 192 >gi|74316206|ref|YP_313946.1| cell division checkpoint GTPase YihA [Thiobacillus denitrificans ATCC 25259] gi|119369277|sp|Q3SMA6|ENGB_THIDA RecName: Full=Probable GTP-binding protein EngB gi|74055701|gb|AAZ96141.1| GTP-binding [Thiobacillus denitrificans ATCC 25259] Length = 206 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 104/210 (49%), Gaps = 14/210 (6%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + + ++ F V + LP + E+AF+GRSN GKSS IN+L + LA TS Sbjct: 1 MTAKPVLNRA--HFFTSVAQFRDLPPS-RAEVAFAGRSNAGKSSAINLLTRKNRLAFTSK 57 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ +NFF LVD+PGYGYA+ P + W GL+ RYL ER Sbjct: 58 TPGRTQLINFFELT---------ADTYLVDLPGYGYAKVPPEVKAKWEGLLSRYLQEREA 108 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L + L++D RH + +D+ + + I+L+K DKLS + TL K K + + Sbjct: 109 LAGMVLIMDARHPLTPLDRQMLEWFAPTGKPVHILLSKADKLSNSEKALTLRKVKQELAD 168 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 T V SS+ R G E I + Sbjct: 169 RET--VSVQLFSSLSRVGAEEAAVRIEGWL 196 >gi|15677644|ref|NP_274803.1| GTPase EngB [Neisseria meningitidis MC58] gi|7227060|gb|AAF42143.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|325139627|gb|EGC62166.1| GTP-binding protein [Neisseria meningitidis CU385] Length = 211 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 11/202 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F + + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 7 QNAKFFTTINHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 66 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 117 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 176 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+K++GI+ + + + Sbjct: 177 QLFSSLKKQGIDEANRTVGSWL 198 >gi|330972147|gb|EGH72213.1| GTP-binding protein YsxC [Pseudomonas syringae pv. aceris str. M302273PT] Length = 211 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFG 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDEDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDVLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFS 184 Query: 193 SVKRKGIEVLRKAILETI 210 + KR G+E + + + Sbjct: 185 APKRLGLEEAYTVLADWM 202 >gi|297821515|ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] gi|297324479|gb|EFH54899.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] Length = 300 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 99/202 (49%), Gaps = 12/202 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ PK PEIA GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 105 FVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLV 164 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ W Y R TL C+ LLID Sbjct: 165 N---------KSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDTLVCILLLIDASVP 215 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ---ETLEKTKYLIRNYPTAHPEVIP 190 ++ID D ++L + V V TK DK+ + E ++ + +IR HP I Sbjct: 216 PQKIDLDCANWLGRNNVPMTFVFTKCDKMKAAKGKRPDENIKAFQQIIRENFKVHPPWIL 275 Query: 191 TSSVKRKGIEVLRKAILETINY 212 TSSV G + L + + NY Sbjct: 276 TSSVSGLGRDELLLHMSQLRNY 297 >gi|224024430|ref|ZP_03642796.1| hypothetical protein BACCOPRO_01155 [Bacteroides coprophilus DSM 18228] gi|224017652|gb|EEF75664.1| hypothetical protein BACCOPRO_01155 [Bacteroides coprophilus DSM 18228] Length = 204 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 10/202 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + P PE AF GRSNVGKSSLIN+L + LA TS PG+T +N Sbjct: 5 SAEFVVSNSRADMCPATHLPEYAFIGRSNVGKSSLINMLTKQPKLAMTSATPGKTLLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYA+ KK +D LI Y+ ER + C+++L+D Sbjct: 65 FLVN---------KEWYLVDLPGYGYAQRGKKMMDKIEKLIQHYVLEREQMTCLFVLVDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + V + I+ TK DK S + ++ + P Sbjct: 116 RLAPQKIDMEFIEWLGENGVPFAIIFTKADKQSAGKTRANVDIYLSELSKQWEELPPYFI 175 Query: 191 TSSVKRKGIEVLRKAILETINY 212 +S+ K+ G + + I E IN+ Sbjct: 176 SSAEKKTGRKEILDYI-EQINH 196 >gi|292493379|ref|YP_003528818.1| GTP-binding protein HSR1-related protein [Nitrosococcus halophilus Nc4] gi|291581974|gb|ADE16431.1| GTP-binding protein HSR1-related protein [Nitrosococcus halophilus Nc4] Length = 205 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 14/210 (6%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M ++++ K+ + + LP E+AF+GRSNVGKSS IN + N K LARTS Sbjct: 1 MAINSLYHKA--HYQGSAYTLSQLPPDRGMEVAFAGRSNVGKSSAINAITNIKGLARTSK 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRTQ +NFF LVD+PGYGYA+ P+ W + YL R + Sbjct: 59 TPGRTQMINFFQLDARR---------CLVDLPGYGYAKVPEAVKRQWRQTLSNYLEWRQS 109 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L + L++D R + D + + + + I+LTK DKL A++ LEK ++ Sbjct: 110 LCGIVLVMDIRRLFQPFDLQMLEWCRARGLPVCILLTKSDKLKRGAAKQALEKVTAHLQE 169 Query: 181 -YPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +P+A + S+ R G+E ++ + Sbjct: 170 AFPSARAQ--LFSAHNRMGVEAIQAQLDRW 197 >gi|225023445|ref|ZP_03712637.1| hypothetical protein EIKCOROL_00303 [Eikenella corrodens ATCC 23834] gi|224943794|gb|EEG25003.1| hypothetical protein EIKCOROL_00303 [Eikenella corrodens ATCC 23834] Length = 219 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 13/206 (6%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F + F V + LP P EIAF GRSN GKSS IN L LA S PGR Sbjct: 2 PLFKNAK--FYTTVNHLKDLP-DTPAEIAFVGRSNAGKSSAINTLTAHTRLAYVSKTPGR 58 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQH+NFF + +VD+PGYGYA+ P+ W L+ YL R+ L + Sbjct: 59 TQHINFFSLANGH---------YMVDLPGYGYAQVPEAVRAHWVQLLGGYLQTRAQLIGL 109 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT- 183 L++D RH +K++D+ + F I+L+K DKLS +TL + ++ + Sbjct: 110 VLVMDARHPLKELDKQMLEFFASTGKPVHILLSKADKLSKNEQIKTLAAVRRALQPFAER 169 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILET 209 V SS+K++G+E + + Sbjct: 170 QAVGVQLFSSLKKQGMEEVDAVVAAW 195 >gi|94270231|ref|ZP_01291683.1| GTP-binding [delta proteobacterium MLMS-1] gi|93450888|gb|EAT01901.1| GTP-binding [delta proteobacterium MLMS-1] Length = 199 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 112/198 (56%), Gaps = 12/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ V ++ LP PEIAF+GRSNVGKSSLIN L+ RKNL + S PG+T+ LNF++ Sbjct: 12 FVDSVFDLAKLPAGELPEIAFAGRSNVGKSSLINCLLGRKNLVKVSAKPGKTRSLNFYLV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ K+ + W L+ YL +R LRCV ++ID RH Sbjct: 72 DER---------LHLVDLPGYGYAKVDKRMQEQWRQLVGGYLEKRDNLRCVVVIIDLRHE 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++D+ + +L V++ +V TK+DKLS Q + + L + + + S+ Sbjct: 123 LKELDRLLAQWLRDIGVAFLLVYTKMDKLSRNQQQR---QARLLDGGLGISPEQRLLFSA 179 Query: 194 VKRKGIEVLRKAILETIN 211 +G L + ++ Sbjct: 180 KSGEGRPELLAKLAAFVD 197 >gi|269213778|ref|ZP_05982836.2| ribosome biogenesis GTP-binding protein YsxC [Neisseria cinerea ATCC 14685] gi|269145348|gb|EEZ71766.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria cinerea ATCC 14685] Length = 211 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 74/198 (37%), Positives = 105/198 (53%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 7 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + LVD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 66 FFELQNGN---------FLVDLPGYGYAQVPEAIRTHWVKLLGDYLQQRKQLIGLILIMD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 117 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSERQNISV 176 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++G+E + + + Sbjct: 177 QLFSSLKKQGLEEVNQTV 194 >gi|224540965|ref|ZP_03681504.1| hypothetical protein CATMIT_00116 [Catenibacterium mitsuokai DSM 15897] gi|224526116|gb|EEF95221.1| hypothetical protein CATMIT_00116 [Catenibacterium mitsuokai DSM 15897] Length = 197 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 104/205 (50%), Gaps = 11/205 (5%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 ++T F+ P PE+ +GRSNVGKSS IN + N + LA+ S+ PG+T Sbjct: 1 MYTIKKAEFMLCAAWTSQWPDESLPEVVMAGRSNVGKSSFINTVTNVQGLAKVSSTPGKT 60 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + LNFF D + LVD+PGYGYA+ PKK ++ + +I YL R L+ + Sbjct: 61 RTLNFFNIND---------ELRLVDVPGYGYAKVPKKMLEQFSEMIDNYLRNRKNLKAMI 111 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 L++D RH K D ++ + A+ +V TK DKL + + K + P H Sbjct: 112 LIVDYRHKPKDDDVTMYDYAKHFAIPVIVVATKEDKLKRNELVKNEKLIKETLDFDPNDH 171 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 + SS+K+KG+ + ILE Sbjct: 172 --FVRFSSLKKKGVREVWDCILELC 194 >gi|238021891|ref|ZP_04602317.1| hypothetical protein GCWU000324_01795 [Kingella oralis ATCC 51147] gi|237866505|gb|EEP67547.1| hypothetical protein GCWU000324_01795 [Kingella oralis ATCC 51147] Length = 284 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 98/199 (49%), Gaps = 11/199 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L + LA S PGRTQH+N Sbjct: 75 QNAQFFTTVNHLKDLP-DTPAEIAFVGRSNAGKSSAINTLCSHVRLAYVSKTPGRTQHIN 133 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + + +VD+PGYGYA+ P+ W L+ YL R L + L++D Sbjct: 134 FFELANGN---------FMVDLPGYGYAQVPEAVRAHWVKLLGDYLQTRKQLIGLVLIMD 184 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K +D + F I+L+K DKLS +TL + ++ + V Sbjct: 185 VRHPMKPLDIQMLDFFALTGRPVHILLSKADKLSKNEQIKTLAAVQKALKPFAERQSVSV 244 Query: 189 IPTSSVKRKGIEVLRKAIL 207 SS+K++G + + + + Sbjct: 245 QLFSSLKKQGTDEVNEVVA 263 >gi|182417604|ref|ZP_02948926.1| GTP-binding protein [Clostridium butyricum 5521] gi|237668408|ref|ZP_04528392.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378559|gb|EDT76088.1| GTP-binding protein [Clostridium butyricum 5521] gi|237656756|gb|EEP54312.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium butyricum E4 str. BoNT E BL5262] Length = 198 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 99/194 (51%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P E+AF GRSNVGKSS+IN L NRK LA+ S PG+T+ +NFF+ Sbjct: 8 FIISAVKREQYPLDNRNEVAFVGRSNVGKSSIINSLTNRKKLAKVSGTPGKTRLVNFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K DSWG I YL+ER L+ + LL+D RH Sbjct: 68 NN---------DFYLVDLPGYGYAKVSKSEKDSWGKTIEMYLTEREQLKRIVLLVDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ + +V TK DKL + ++ + K ++ + SS Sbjct: 119 PTGDDILMYEWAKHFGYDVVVVATKSDKLKNSEFKKNEKIIKETLK--LKEEDKFYFFSS 176 Query: 194 VKRKGIEVLRKAIL 207 + ++GIE L + Sbjct: 177 LNKRGIETLIDNLF 190 >gi|145588273|ref|YP_001154870.1| GTP-binding protein, HSR1-related [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189037184|sp|A4SUZ2|ENGB_POLSQ RecName: Full=Probable GTP-binding protein EngB gi|145046679|gb|ABP33306.1| cell division checkpoint GTPase YihA [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 221 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 14/206 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP E+AF+GRSN GKSS +N+L N+K LA S PGRTQH+N+F Sbjct: 9 FATTVNDTHCLPATPLREVAFAGRSNAGKSSALNVLCNQKRLAFASKTPGRTQHINYFGI 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +L LVD+PGYGYA + W L+ YL ER L + L++D R G Sbjct: 69 FAKDDL-----LAYLVDLPGYGYAAVNHETKYHWNALLSDYLQEREQLVGMVLIVDARRG 123 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE------ 187 + ++D+ + + I+L+K DKL+ + + LE + ++ Y A P+ Sbjct: 124 ITELDEQMIQWFVPTGKPIHILLSKCDKLNKSECKHALEDVRKQLQQYDPALPDGTGESQ 183 Query: 188 ---VIPTSSVKRKGIEVLRKAILETI 210 SS KR G+E I++ + Sbjct: 184 QLTAQLFSSTKRIGLEEADNLIIKWL 209 >gi|12644641|sp|Q9JY03|ENGB_NEIMB RecName: Full=Probable GTP-binding protein EngB gi|316984404|gb|EFV63377.1| putative GTPase [Neisseria meningitidis H44/76] gi|325200868|gb|ADY96323.1| GTP-binding protein [Neisseria meningitidis H44/76] Length = 209 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 11/202 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F + + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTINHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 64 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 115 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 174 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+K++GI+ + + + Sbjct: 175 QLFSSLKKQGIDEANRTVGSWL 196 >gi|251777864|ref|ZP_04820784.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082179|gb|EES48069.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 198 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 97/194 (50%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P E+AF GRSNVGKSSLIN L NRK LA+ S PG+T+ +NFF+ Sbjct: 8 FIISAVKPHQYPTDNRNEVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRLINFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K D+WG I YLS R L+ + L+D RH Sbjct: 68 NN---------DFYLVDLPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ + IV TK DKL +++ + + ++ T + SS Sbjct: 119 PTGDDIMMYEWAKHFGYDVVIVATKSDKLKNAEFKKSEKLIRDTLK--LTKDDKFYFYSS 176 Query: 194 VKRKGIEVLRKAIL 207 + +KG E L + Sbjct: 177 LNKKGTEELIDKLF 190 >gi|118581676|ref|YP_902926.1| ribosome biogenesis GTP-binding protein YsxC [Pelobacter propionicus DSM 2379] gi|166225967|sp|A1AU48|ENGB_PELPD RecName: Full=Probable GTP-binding protein EngB gi|118504386|gb|ABL00869.1| small GTP-binding protein [Pelobacter propionicus DSM 2379] Length = 200 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 102/197 (51%), Gaps = 12/197 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F++ + P PE+AF GRSNVGKSSLIN+L NRK+L RTS+ PGRTQ +NF Sbjct: 5 KAEFIKSAVKPKDYPLETLPEVAFVGRSNVGKSSLINVLANRKSLVRTSSTPGRTQLINF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + LVD+PGYGYA+AP WG +I YL+ R LR V L++D Sbjct: 65 FDIN---------GVLTLVDLPGYGYAKAPPDVRKQWGPMIETYLARRGNLRAVVLILDI 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R D + +L+ + VLTK DKLS + I+ E++ Sbjct: 116 RRIPSDGDLQMLGWLETYDIPPIFVLTKCDKLSKVERAKQTALIASAIKRDRN---ELLH 172 Query: 191 TSSVKRKGIEVLRKAIL 207 S++ R G + + K +L Sbjct: 173 FSALSRDGRDAVWKEVL 189 >gi|59800561|ref|YP_207273.1| GTPase EngB [Neisseria gonorrhoeae FA 1090] gi|268594088|ref|ZP_06128255.1| GTPase EngB [Neisseria gonorrhoeae 35/02] gi|268596140|ref|ZP_06130307.1| GTPase EngB [Neisseria gonorrhoeae FA19] gi|291044574|ref|ZP_06570283.1| GTPase EngB [Neisseria gonorrhoeae DGI2] gi|293397699|ref|ZP_06641905.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria gonorrhoeae F62] gi|59717456|gb|AAW88861.1| putative GTPase [Neisseria gonorrhoeae FA 1090] gi|268547477|gb|EEZ42895.1| GTPase EngB [Neisseria gonorrhoeae 35/02] gi|268549928|gb|EEZ44947.1| GTPase EngB [Neisseria gonorrhoeae FA19] gi|291011468|gb|EFE03464.1| GTPase EngB [Neisseria gonorrhoeae DGI2] gi|291611645|gb|EFF40714.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria gonorrhoeae F62] Length = 211 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 7 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL R L + L++D Sbjct: 66 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKQLIGLVLIMD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 117 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 176 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + Sbjct: 177 QLFSSLKKQGIDEANRTV 194 >gi|325204762|gb|ADZ00216.1| GTP-binding protein [Neisseria meningitidis M01-240355] Length = 221 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL R L + L++D Sbjct: 64 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 115 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + Sbjct: 175 QLFSSLKKQGIDEANRTV 192 >gi|188585731|ref|YP_001917276.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus JW/NM-WN-LF] gi|229813286|sp|B2A1E8|ENGB_NATTJ RecName: Full=Probable GTP-binding protein EngB gi|179350418|gb|ACB84688.1| GTP-binding protein HSR1-related [Natranaerobius thermophilus JW/NM-WN-LF] Length = 193 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 105/197 (53%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ P PEI+F GRSNVGKSSLIN L+NRKNLA TS PG+T+ +NFF+ Sbjct: 8 YMASAYLSSQFPSEMYPEISFIGRSNVGKSSLINTLINRKNLAYTSKQPGKTRTINFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ VD+PGYG+A+ K W L+ YLS+R+TL+ L+ID RHG Sbjct: 68 N---------KSLYFVDLPGYGFAKVSKTMQKDWEQLVNAYLSQRNTLKLSILIIDGRHG 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K D D+F +L +V TK+DK+ ++ + + + + E+I SS Sbjct: 119 PKDADIDMFDYLLDFERPVLLVATKMDKVKANKRKQRITEMRSALE--LDQDDELITFSS 176 Query: 194 VKRKGIEVLRKAILETI 210 +G L + I + + Sbjct: 177 ATGEGKNELWQIIEDLL 193 >gi|87120351|ref|ZP_01076246.1| putative GTPase, involved in coordination of cell cycle (EngB) [Marinomonas sp. MED121] gi|86164454|gb|EAQ65724.1| putative GTPase, involved in coordination of cell cycle (EngB) [Marinomonas sp. MED121] Length = 211 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 11/207 (5%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 +IF + F++ ++ P E+AF+GRSN GKS+ +N L ++K LARTS PG Sbjct: 5 DSIFR--SAHFIKSAEKLSQCPVDQGLEVAFAGRSNAGKSTALNTLTDQKKLARTSKTPG 62 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ +N F + L+D+PGYG+A+ P W + YL R +L Sbjct: 63 RTQLINCFGLN--------VEDRRLIDLPGYGFAKVPVAMKMKWQAHMQDYLMNRRSLAG 114 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 V L++D RH +K+ D + + + ++LTK DKL A+ T + +++ Sbjct: 115 VVLVMDIRHPLKEFDHMMLDWAKSNKMQVHVILTKSDKLKRGPAKSTKLQVAKALKDL-E 173 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETI 210 V S + GI+ LR + + Sbjct: 174 VIGSVQTFSGLNGDGIDELRLKLSTWL 200 >gi|300361499|ref|ZP_07057676.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri JV-V03] gi|300354118|gb|EFJ69989.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri JV-V03] Length = 194 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ PK PE A +GRSNVGKSSLIN +VNR+ LARTS PG+TQ LNF+ Sbjct: 8 FVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYKV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ KK ++G +I YL R+ L+ + LL+D RH Sbjct: 68 NN---------ELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLVLLVDARHD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++F++ + +V TK+DKL A + +K + + + +P SS Sbjct: 119 PTADDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL-DLKQENVSFLPFSS 177 Query: 194 VKRKGIEVLRKAILETI 210 V + ++ I + + Sbjct: 178 VSKLNVDKFWDWIEDKM 194 >gi|194097727|ref|YP_002000768.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria gonorrhoeae NCCP11945] gi|239998232|ref|ZP_04718156.1| GTPase EngB [Neisseria gonorrhoeae 35/02] gi|240013416|ref|ZP_04720329.1| GTPase EngB [Neisseria gonorrhoeae DGI18] gi|240015857|ref|ZP_04722397.1| GTPase EngB [Neisseria gonorrhoeae FA6140] gi|240079998|ref|ZP_04724541.1| GTPase EngB [Neisseria gonorrhoeae FA19] gi|240112205|ref|ZP_04726695.1| GTPase EngB [Neisseria gonorrhoeae MS11] gi|240114949|ref|ZP_04729011.1| GTPase EngB [Neisseria gonorrhoeae PID18] gi|240117235|ref|ZP_04731297.1| GTPase EngB [Neisseria gonorrhoeae PID1] gi|240120486|ref|ZP_04733448.1| GTPase EngB [Neisseria gonorrhoeae PID24-1] gi|240122787|ref|ZP_04735743.1| GTPase EngB [Neisseria gonorrhoeae PID332] gi|240124981|ref|ZP_04737867.1| GTPase EngB [Neisseria gonorrhoeae SK-92-679] gi|240127495|ref|ZP_04740156.1| GTPase EngB [Neisseria gonorrhoeae SK-93-1035] gi|254493010|ref|ZP_05106181.1| GTP-binding protein [Neisseria gonorrhoeae 1291] gi|260441235|ref|ZP_05795051.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria gonorrhoeae DGI2] gi|268598264|ref|ZP_06132431.1| GTPase EngB [Neisseria gonorrhoeae MS11] gi|268600615|ref|ZP_06134782.1| GTPase EngB [Neisseria gonorrhoeae PID18] gi|268602926|ref|ZP_06137093.1| GTPase EngB [Neisseria gonorrhoeae PID1] gi|268681399|ref|ZP_06148261.1| GTPase EngB [Neisseria gonorrhoeae PID332] gi|268683566|ref|ZP_06150428.1| GTPase EngB [Neisseria gonorrhoeae SK-92-679] gi|268685868|ref|ZP_06152730.1| GTPase EngB [Neisseria gonorrhoeae SK-93-1035] gi|119369221|sp|Q5FAC6|ENGB_NEIG1 RecName: Full=Probable GTP-binding protein EngB gi|238693222|sp|B4RQ29|ENGB_NEIG2 RecName: Full=Probable GTP-binding protein EngB gi|193933017|gb|ACF28841.1| GTP-binding protein [Neisseria gonorrhoeae NCCP11945] gi|226512050|gb|EEH61395.1| GTP-binding protein [Neisseria gonorrhoeae 1291] gi|268582395|gb|EEZ47071.1| GTPase EngB [Neisseria gonorrhoeae MS11] gi|268584746|gb|EEZ49422.1| GTPase EngB [Neisseria gonorrhoeae PID18] gi|268587057|gb|EEZ51733.1| GTPase EngB [Neisseria gonorrhoeae PID1] gi|268621683|gb|EEZ54083.1| GTPase EngB [Neisseria gonorrhoeae PID332] gi|268623850|gb|EEZ56250.1| GTPase EngB [Neisseria gonorrhoeae SK-92-679] gi|268626152|gb|EEZ58552.1| GTPase EngB [Neisseria gonorrhoeae SK-93-1035] gi|317163518|gb|ADV07059.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria gonorrhoeae TCDC-NG08107] Length = 209 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL R L + L++D Sbjct: 64 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 115 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + Sbjct: 175 QLFSSLKKQGIDEANRTV 192 >gi|313669022|ref|YP_004049306.1| GTP-binding protein [Neisseria lactamica ST-640] gi|313006484|emb|CBN87947.1| putative GTP-binding protein [Neisseria lactamica 020-06] Length = 207 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 75/194 (38%), Positives = 102/194 (52%), Gaps = 11/194 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHTRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL R L + L++D Sbjct: 64 FFELQNGN---------FMVDLPGYGYAQVPEAVRSHWVNLLGDYLRYRKQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 115 ARHPLKELDIRMLDFFHTTGRPVHILLSKSDKLSKNEQIKTLSQVKKLLKPYSERQNIGV 174 Query: 189 IPTSSVKRKGIEVL 202 SS+KR+GIE + Sbjct: 175 QLFSSLKRQGIEEV 188 >gi|323143398|ref|ZP_08078083.1| ribosome biogenesis GTP-binding protein YsxC [Succinatimonas hippei YIT 12066] gi|322416803|gb|EFY07452.1| ribosome biogenesis GTP-binding protein YsxC [Succinatimonas hippei YIT 12066] Length = 215 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I +P EIAF+GRSN GKSS IN + ++K+LA+TS+ PGRT+ +N F Sbjct: 17 FVTSAPDIRQMPPDNGIEIAFAGRSNSGKSSSINAICDQKHLAKTSSTPGRTRLINLFAV 76 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA P+ W + YL +R LR + + +D RH Sbjct: 77 QANK---------FLVDLPGYGYAAVPEAMKKQWQKSMSEYLQKRKALRGIVITMDIRHP 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K D+ + + + I+LTK DKL + L++ K L+ + + VIP S+ Sbjct: 128 LKDHDRLILDWSTAANLPAIILLTKADKLGVNARSKALKEVKLLLSEFDGSF-TVIPFSA 186 Query: 194 VKRKGIEVLRKAI 206 + G++ RK + Sbjct: 187 WRGIGVDETRKLL 199 >gi|114565094|ref|YP_752608.1| GTPase EngB [Shewanella frigidimarina NCIMB 400] gi|119369253|sp|Q07W45|ENGB_SHEFN RecName: Full=Probable GTP-binding protein EngB gi|114336387|gb|ABI73769.1| cell division checkpoint GTPase YihA [Shewanella frigidimarina NCIMB 400] Length = 224 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 S F ++ FL P+I L P EIAF+GRSN GKSS +N L +K+LART Sbjct: 4 SRIDFRRAK--FLISAPDIAHLDQYLPGDIGVEIAFAGRSNAGKSSALNALTEQKSLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F D LVD+PGYG+A+ P W + YL +R Sbjct: 62 SKTPGRTQLINVFQLDDDR---------RLVDLPGYGFAQVPLALKHKWQEALGEYLQKR 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + L V +L+D RH +K +D + + + +LTK DKL+ + +T+ + + Sbjct: 113 ACLSGVVVLMDIRHPLKDLDMQMIEWAVLSNIPVLALLTKSDKLTQSVKMKTVNDVRAAL 172 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + + +V SS+K G + + + + Sbjct: 173 KEF-GDKVQVETLSSLKGTGKPKVLSILNDWCH 204 >gi|313906309|ref|ZP_07839652.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium cellulosolvens 6] gi|313468865|gb|EFR64224.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium cellulosolvens 6] Length = 196 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 73/191 (38%), Positives = 109/191 (57%), Gaps = 12/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP G EIAF+G+SNVGKSSLIN L+NRK+LARTS+ PG+TQ +NF+ + Sbjct: 16 SKLPDTGQAEIAFAGKSNVGKSSLINGLMNRKSLARTSSQPGKTQTINFYHINE------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGY A SWG +I RYL + L+ V+LL+D RH D+ + Sbjct: 70 ---EFYLVDLPGYGYTTASVNVRQSWGRMIERYLKTATNLKAVFLLLDIRHAPNANDKQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + ++ TK+DK+ + Q+ L+ + + A ++ P SSV + G E Sbjct: 127 YDWVLDNGYTPIVIATKLDKIKRSQVQKQLKLLRDTLGMEKGA--KLFPYSSVTKAGREE 184 Query: 202 LRKAIL-ETIN 211 + + I E +N Sbjct: 185 IWEFIEKECLN 195 >gi|227509448|ref|ZP_03939497.1| GTPase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512155|ref|ZP_03942204.1| GTPase [Lactobacillus buchneri ATCC 11577] gi|227524115|ref|ZP_03954164.1| GTPase [Lactobacillus hilgardii ATCC 8290] gi|227084549|gb|EEI19861.1| GTPase [Lactobacillus buchneri ATCC 11577] gi|227088746|gb|EEI24058.1| GTPase [Lactobacillus hilgardii ATCC 8290] gi|227191160|gb|EEI71227.1| GTPase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 195 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 11/192 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 E P PEIAF GRSNVGKSSL N+L+NRK ARTS+ PG+TQ LNF+ +D Sbjct: 10 ISAVEAKQYPNTRFPEIAFVGRSNVGKSSLTNVLINRKGYARTSSQPGKTQTLNFYNIED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ K N + WG +I +YL+ER LR V L+D RH Sbjct: 70 ---------KLFFVDVPGYGYAKTSKANREKWGKMIEKYLTEREQLRGVITLVDGRHAPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + +L + V TK+DK++ + + + A+ ++I S++ Sbjct: 121 NDDVSMHEWLKYYGIEILTVATKMDKIAKGKWNKQESLIRKTLN--LDANEKLISFSALT 178 Query: 196 RKGIEVLRKAIL 207 ++G + + I Sbjct: 179 KQGKTEIWQWIE 190 >gi|121634279|ref|YP_974524.1| GTPase EngB [Neisseria meningitidis FAM18] gi|161869414|ref|YP_001598581.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria meningitidis 053442] gi|218767611|ref|YP_002342123.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria meningitidis Z2491] gi|12644640|sp|Q9JVW1|ENGB_NEIMA RecName: Full=Probable GTP-binding protein EngB gi|166225965|sp|A1KS92|ENGB_NEIMF RecName: Full=Probable GTP-binding protein EngB gi|189037181|sp|A9M1V2|ENGB_NEIM0 RecName: Full=Probable GTP-binding protein EngB gi|120865985|emb|CAM09722.1| putative GTP-binding protein [Neisseria meningitidis FAM18] gi|121051619|emb|CAM07919.1| putative GTP-binding protein [Neisseria meningitidis Z2491] gi|161594967|gb|ABX72627.1| GTP-binding protein [Neisseria meningitidis 053442] gi|319409871|emb|CBY90184.1| putative GTP-binding protein EngB [Neisseria meningitidis WUE 2594] gi|325127554|gb|EGC50477.1| GTP-binding protein [Neisseria meningitidis N1568] gi|325129546|gb|EGC52370.1| GTP-binding protein [Neisseria meningitidis OX99.30304] gi|325131453|gb|EGC54160.1| GTP-binding protein [Neisseria meningitidis M6190] gi|325135590|gb|EGC58207.1| GTP-binding protein [Neisseria meningitidis M0579] gi|325137560|gb|EGC60141.1| GTP-binding protein [Neisseria meningitidis ES14902] gi|325141674|gb|EGC64134.1| GTP-binding protein [Neisseria meningitidis 961-5945] gi|325197693|gb|ADY93149.1| GTP-binding protein [Neisseria meningitidis G2136] Length = 209 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 64 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 115 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + Sbjct: 175 QLFSSLKKQGIDEANRTV 192 >gi|295425158|ref|ZP_06817863.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus amylolyticus DSM 11664] gi|295065217|gb|EFG56120.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus amylolyticus DSM 11664] Length = 196 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 10/194 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PK PEIA +GRSNVGKSSLIN LVNRKNLARTS+ PG+TQ LNF++ Sbjct: 11 SAVREDQYPKDDLPEIALAGRSNVGKSSLINTLVNRKNLARTSSQPGKTQTLNFYLVN-- 68 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + LVD+PGYGYA+ +K +G +I YL R+ L+ + +L+D RH + Sbjct: 69 -------KSFYLVDVPGYGYAKVSQKKRQEFGEMIQDYLETRANLKGLIILVDSRHVPSK 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 DQ ++ + + +V TKIDKL + + K + + + V+ SSV + Sbjct: 122 DDQSMYEYAQYLNLPILVVCTKIDKLKKSQLTKVKANLKKVF-DLSYDNVSVLTFSSVTK 180 Query: 197 KGIEVLRKAILETI 210 + L I E I Sbjct: 181 THVTELGDWIQEKI 194 >gi|77361668|ref|YP_341243.1| GTPase EngB [Pseudoalteromonas haloplanktis TAC125] gi|119369234|sp|Q3IJG3|ENGB_PSEHT RecName: Full=Probable GTP-binding protein EngB gi|76876579|emb|CAI87801.1| putative GTPase with nucleoside triP hydrolase domain, involved in coordination of cell cycle [Pseudoalteromonas haloplanktis TAC125] Length = 222 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 103/196 (52%), Gaps = 9/196 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L ++K LARTS PGRTQ +N F Sbjct: 13 FVTSAPDITKLPADTGIEVAFAGRSNAGKSSALNALTDQK-LARTSKTPGRTQLINTFEL 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + M L+D+PGYG+A+ P + W + YL +R +L+ + +L+D RH Sbjct: 72 AD-------VDDMRLIDLPGYGFAKVPIEMKKKWQKSLGEYLQKRQSLKGIVILMDIRHP 124 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K +D+D+ ++ + +LTK DK Q + K + + V SS Sbjct: 125 LKDLDRDLINWAISSEIPVLALLTKADKFKQGPRQSQVLKVRRELSAL-DGDITVHAFSS 183 Query: 194 VKRKGIEVLRKAILET 209 +K G+ + K + E Sbjct: 184 LKGTGLPDVAKKLDEW 199 >gi|315653482|ref|ZP_07906403.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners ATCC 55195] gi|315489173|gb|EFU78814.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus iners ATCC 55195] Length = 195 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 103/197 (52%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+ PE A SGRSNVGKSSLIN ++NR+NLARTS PG+TQ LNF++ Sbjct: 8 FVISAVSDKQYPQDDLPEFALSGRSNVGKSSLINAVLNRRNLARTSQQPGKTQTLNFYLV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA+ K+ +G +I YL R+ L+ + LL+D RH Sbjct: 68 N---------TDLYFVDVPGYGYAKVSKEQRQKFGEMIQDYLETRADLKGLVLLVDARHD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++F++ + +V TKIDKL + + K + + + +P SS Sbjct: 119 PTVDDINMFNYALCLNIPILVVATKIDKLKKSAIGQLESKIGLSL-DLTQSQVTFLPFSS 177 Query: 194 VKRKGIEVLRKAILETI 210 + I+ K I +I Sbjct: 178 ETKINIDKFWKWIENSI 194 >gi|225389278|ref|ZP_03759002.1| hypothetical protein CLOSTASPAR_03024 [Clostridium asparagiforme DSM 15981] gi|225044657|gb|EEG54903.1| hypothetical protein CLOSTASPAR_03024 [Clostridium asparagiforme DSM 15981] Length = 206 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 11/186 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PE AFSG+SNVGKSSLIN L+NRK ARTS+ PG+TQ +NF+ D Sbjct: 16 SKLPENHLPEFAFSGKSNVGKSSLINALMNRKAYARTSSQPGKTQTINFYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 A+ VD+PGYGYA+ + + WG +I RYL + L+ V+LL+D RH D+ + Sbjct: 70 ---ALYYVDLPGYGYAKVALEAKEKWGKMIERYLRQSPMLKMVFLLVDIRHEPSANDKSM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ I+ TK+DK++ + Q+ ++ + + +IP S+ ++G E Sbjct: 127 YDWIVYNGYHPVIIATKLDKINRSQIQKQVKLLRQGLGM--DKDGILIPFSAETKQGREK 184 Query: 202 LRKAIL 207 + I Sbjct: 185 IWDLIE 190 >gi|167769426|ref|ZP_02441479.1| hypothetical protein ANACOL_00756 [Anaerotruncus colihominis DSM 17241] gi|167668394|gb|EDS12524.1| hypothetical protein ANACOL_00756 [Anaerotruncus colihominis DSM 17241] Length = 202 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 99/203 (48%), Gaps = 14/203 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F LP + PEIAF+GRSNVGKSS+IN L NRK LAR S PG+T Sbjct: 1 MNYHNVKFETSFGTAAQLPPSELPEIAFAGRSNVGKSSMINKLFNRKQLARVSAVPGKTA 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NFF + D+PGYGYA+ K W LI Y + LR V+ Sbjct: 61 TINFF----------RADGLRFADLPGYGYAKVSKGEKRRWSELISGYFEQDRDLRLVFQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID RH D + +++ + + + +VLTK DKLS T L + + P A Sbjct: 111 LIDMRHAPTAGDLTMINYMIDREIPFVVVLTKADKLSKTQRAVRLAALETEL---PCADQ 167 Query: 187 EV-IPTSSVKRKGIEVLRKAILE 208 V IP SS +G++ +R + + Sbjct: 168 IVTIPFSSETGEGVDAVRDVVAQ 190 >gi|330874573|gb|EGH08722.1| GTP-binding protein YsxC [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965635|gb|EGH65895.1| GTP-binding protein YsxC [Pseudomonas syringae pv. actinidiae str. M302091] Length = 211 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 94/189 (49%), Gaps = 10/189 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFG 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDDDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDLLMLDWAIASHMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFS 184 Query: 193 SVKRKGIEV 201 + KR G+E Sbjct: 185 APKRMGLEE 193 >gi|189462131|ref|ZP_03010916.1| hypothetical protein BACCOP_02811 [Bacteroides coprocola DSM 17136] gi|189431212|gb|EDV00197.1| hypothetical protein BACCOP_02811 [Bacteroides coprocola DSM 17136] Length = 239 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 104/201 (51%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + P+ PE AF GRSNVGKSSLIN+L + LA TS PG+T +N Sbjct: 44 SAEFVVSNSRADMCPQTNLPEYAFIGRSNVGKSSLINMLTKQPKLAMTSATPGKTLLINH 103 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYA+ KK +D LI Y+ ER + C+++L+D Sbjct: 104 FLVN---------KEWYLVDLPGYGYAQRGKKMMDKIQKLIEYYVLEREQMTCLFVLVDS 154 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + V + I+ TK DK S + + + +++ P Sbjct: 155 RLESQKIDLEFMEWLGENGVPFAIIFTKSDKQSSGKTKFNVNRYMEVLKEQWEELPPYFI 214 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS K+ G + + I E+IN Sbjct: 215 SSSEKKTGRKEILDYI-ESIN 234 >gi|261401329|ref|ZP_05987454.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria lactamica ATCC 23970] gi|269208713|gb|EEZ75168.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria lactamica ATCC 23970] gi|309379659|emb|CBX21830.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 207 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 75/194 (38%), Positives = 102/194 (52%), Gaps = 11/194 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHTRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL R L + L++D Sbjct: 64 FFELQNGN---------FMVDLPGYGYAQVPEAVRSHWVNLLGDYLRYRKQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 115 ARHPLKELDIRMLDFFHTTGRPVHILLSKSDKLSKNEQIKTLSQVKKLLKPYSERQNIGV 174 Query: 189 IPTSSVKRKGIEVL 202 SS+KR+GIE + Sbjct: 175 QLFSSLKRQGIEEV 188 >gi|163748903|ref|ZP_02156155.1| GTP-binding protein [Shewanella benthica KT99] gi|161331677|gb|EDQ02482.1| GTP-binding protein [Shewanella benthica KT99] Length = 239 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 S F K+ FL P+I L P EIAF+GRSN GKSS +N+L ++K+LART Sbjct: 14 SRIDFRKAK--FLISAPDIAHLNEYLPGDAGIEIAFAGRSNAGKSSALNLLTDQKSLART 71 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F + LVD+PGYG+A+ P + W + YL ER Sbjct: 72 SKTPGRTQLINVFELDEHR---------RLVDLPGYGFAQVPLALKNKWQKSLGEYLQER 122 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 L + +L+D RH +K +D + + + + +LTK DK+ + + + + + + Sbjct: 123 QCLGGMVVLMDIRHPLKDLDMQMIEWAVESDIPVLALLTKADKMKQSERMKMVNEVRKHL 182 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++ +V P SS+K G + + + Sbjct: 183 GDFDD-RVKVEPFSSLKGIGKAKVLDILNTWCH 214 >gi|325133582|gb|EGC56243.1| GTP-binding protein [Neisseria meningitidis M13399] Length = 209 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 64 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWFNLLGDYLQQRKQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 115 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + Sbjct: 175 QLFSSLKKQGIDEANRTV 192 >gi|257790850|ref|YP_003181456.1| GTP-binding protein HSR1-related [Eggerthella lenta DSM 2243] gi|317488439|ref|ZP_07946992.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp. 1_3_56FAA] gi|325831912|ref|ZP_08165009.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp. HGA1] gi|257474747|gb|ACV55067.1| GTP-binding protein HSR1-related [Eggerthella lenta DSM 2243] gi|316912483|gb|EFV34039.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp. 1_3_56FAA] gi|325486233|gb|EGC88685.1| ribosome biogenesis GTP-binding protein YsxC [Eggerthella sp. HGA1] Length = 193 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 101/198 (51%), Gaps = 12/198 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F R L + PEIAF+GRSNVGKSSL+N L NRK LA+ S PG+T +NFF Sbjct: 7 VFERSFGVSSQLTPSTMPEIAFAGRSNVGKSSLLNKLFNRKGLAKVSQTPGKTATINFFS 66 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + VD+PGYGYA+ K + W LI Y ++ L V L+D RH Sbjct: 67 C----------DGVRFVDLPGYGYAKVSKSDKSRWSELIEGYFNQDRDLALVVSLVDIRH 116 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +D ++ FL + + + +VLTK DKLS + K ++ A ++ S Sbjct: 117 EASDLDVNMIGFLQEAELPFAVVLTKADKLSRQQQMKQKAALKKQLK--LGADVPLVVCS 174 Query: 193 SVKRKGIEVLRKAILETI 210 S K GI+ LR I ++ Sbjct: 175 SEKGTGIDELRSLIKNSV 192 >gi|29346493|ref|NP_809996.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides thetaiotaomicron VPI-5482] gi|253568103|ref|ZP_04845514.1| GTPase EngB [Bacteroides sp. 1_1_6] gi|81445016|sp|Q8A8T4|ENGB_BACTN RecName: Full=Probable GTP-binding protein EngB gi|29338389|gb|AAO76190.1| putative GTP-binding protein [Bacteroides thetaiotaomicron VPI-5482] gi|251842176|gb|EES70256.1| GTPase EngB [Bacteroides sp. 1_1_6] Length = 202 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 9/197 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L RK LA TS PG+T +N Sbjct: 5 SAEFVISNTDVKKCPTGVFPEYAFIGRSNVGKSSLINMLTARKGLAMTSATPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ + LVD+PGYGYAR +K D +I Y+ ER + +++LID Sbjct: 65 FLINQ---------SWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKMNINNYLRELSKEWEELPPYFI 175 Query: 191 TSSVKRKGIEVLRKAIL 207 +SS R G + I Sbjct: 176 SSSENRTGRTEILDYIE 192 >gi|313894793|ref|ZP_07828353.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral taxon 137 str. F0430] gi|312976474|gb|EFR41929.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas sp. oral taxon 137 str. F0430] Length = 207 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 5/210 (2%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + TK+ ++L P+ PE+AF GRSNVGKSSLIN L + LAR S+ Sbjct: 1 MQESVVVTKA--VYLASAVRKDQYPEVRRPEVAFIGRSNVGKSSLINSLTRIRQLARVSS 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ +NF+ + + +VD+PGYGYA+A + + +W I Y Sbjct: 59 KPGKTQTINFYELLLRIDGGEERHPVHIVDLPGYGYAKAARDSRKTWAKFIEEYFLTSEY 118 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V LL+D RH + D+++FS+L + +V TK DKL + + + + Sbjct: 119 LRFVCLLLDIRHMPMESDRNMFSWLIAHDIPVLVVATKADKLGKNACRAQIAAMRRALGV 178 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++P +S K +G L + + + Sbjct: 179 PELT---ILPYASPKNEGRSELLDVMKDNL 205 >gi|182627119|ref|ZP_02954837.1| hypothetical protein CJD_0168 [Clostridium perfringens D str. JGS1721] gi|177907508|gb|EDT70166.1| hypothetical protein CJD_0168 [Clostridium perfringens D str. JGS1721] Length = 197 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P PEIAF GRSNVGKSS+IN L NR+ LA+ S PG+T+ +NFF+ Sbjct: 8 FIISAVKREQYPDNNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRLINFFLL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ KK SWG I RYL R L+ V LL+DCRH Sbjct: 68 N---------KDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ ++ ++ TK DK+S ++ + K + P H ++ SS Sbjct: 119 PTADDVQMYEWIKHYGYEVVVIATKSDKISNNQIGKSEKLIKETLG-LPKDH-KLKFFSS 176 Query: 194 VKRKGIEVLRKAILETI 210 + +KG + L + + + Sbjct: 177 LNKKGKDELVDYLFDDL 193 >gi|294138858|ref|YP_003554836.1| GTP-binding protein EngB [Shewanella violacea DSS12] gi|293325327|dbj|BAJ00058.1| GTP-binding protein EngB [Shewanella violacea DSS12] Length = 234 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 16/213 (7%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 S F K+ FL P+I L P EIAF+GRSN GKSS +N++ ++K+LART Sbjct: 4 SRIDFRKAK--FLISAPDIAHLDEYLPGDAGIEIAFAGRSNAGKSSALNLITDQKSLART 61 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F + LVD+PGYG+A+ P W + YL ER Sbjct: 62 SKTPGRTQLINVFELDEHR---------RLVDLPGYGFAQVPLALKKKWQKALGEYLQER 112 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 L + +L+D RH +K +D + + + + +LTK DK+ + + + + + + Sbjct: 113 KCLGGMVVLMDIRHPLKDLDMQMIEWAVESDIPVLALLTKADKMKQSERMKMVNEVRKHL 172 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++ +V P SS+K G + + + Sbjct: 173 ADFDD-RVKVEPFSSLKGIGKAKVLDILNTWCH 204 >gi|332637217|ref|ZP_08416080.1| GTP-binding protein YsxC [Weissella cibaria KACC 11862] Length = 209 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 12/195 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P G PE+AF GRSNVGKSSL N+L+NRK+ ARTS+ PG+TQ LNF+ + Sbjct: 9 VMSAVRASQYPTDGLPEVAFVGRSNVGKSSLTNVLINRKSFARTSSQPGKTQTLNFYKVE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ KK + + +I YL R L+ + L+D RH Sbjct: 69 D---------QIFFVDVPGYGYAKVSKKAREEFAVMIGEYLRTREPLKGIVQLVDARHMP 119 Query: 135 KQIDQDVFSFL--DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D +++++L D + +V TK DK+S + K ++ P + S Sbjct: 120 SKEDIEMYNWLTSDDIGLPVLVVATKADKISRGKWNKAEADIKRGLQFNPDVS-DFEIFS 178 Query: 193 SVKRKGIEVLRKAIL 207 S + G + + + Sbjct: 179 SETKYGKDNVWDWLE 193 >gi|110802133|ref|YP_698700.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium perfringens SM101] gi|119369186|sp|Q0ST57|ENGB_CLOPS RecName: Full=Probable GTP-binding protein EngB gi|110682634|gb|ABG86004.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium perfringens SM101] Length = 197 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P PEIAF GRSNVGKSS+IN L NR+ LA+ S PG+T+ +NFF+ Sbjct: 8 FIISAVKREQYPDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRLINFFLL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ KK SWG I RYL R L+ V LL+DCRH Sbjct: 68 N---------KDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLVDCRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ ++ ++ TK DK+S ++ + K + ++ SS Sbjct: 119 PTADDVQMYEWIKHYGYEVVVIATKSDKISNNQIGKSEKLIKETLG--LPKDYKLKFFSS 176 Query: 194 VKRKGIEVLRKAILETI 210 + +KG + L + + + Sbjct: 177 LNKKGKDELVDYLFDDL 193 >gi|323489957|ref|ZP_08095178.1| GTP-binding protein [Planococcus donghaensis MPA1U2] gi|323396253|gb|EGA89078.1| GTP-binding protein [Planococcus donghaensis MPA1U2] Length = 193 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 11/193 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ G PE A +GRSNVGKSS IN ++ RK++AR S+ PG+TQ LNF+ + Sbjct: 9 VISAVRPDQYPEDGLPEFALAGRSNVGKSSFINKMIGRKSMARISSKPGKTQTLNFYKIE 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K ++WG +I RY+++R LR V ++D RH Sbjct: 69 E---------KLFYVDVPGYGYAKVSKSEREAWGKMIERYITDREPLRAVIQIVDLRHPP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ F+ + I+ TK DK+ + + + + +I SS Sbjct: 120 SKDDIAMYDFMKHFEIPCIIIATKADKIPKGKWDKHKKIVRTTLDM--DKSDPLIVFSSE 177 Query: 195 KRKGIEVLRKAIL 207 G + + I Sbjct: 178 TGLGKDEAWQEIE 190 >gi|302335290|ref|YP_003800497.1| ribosome biogenesis GTP-binding protein YsxC [Olsenella uli DSM 7084] gi|301319130|gb|ADK67617.1| ribosome biogenesis GTP-binding protein YsxC [Olsenella uli DSM 7084] Length = 194 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + +G LP+ PE+AF+GRSNVGKSSL+N LV RK LAR S+ PG+T ++NFF Sbjct: 10 YEASYGTVGQLPEPTTPEVAFAGRSNVGKSSLLNRLVGRKALARVSSQPGKTANINFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + VD+PGYG+A+ ++ W LI Y ++ + V L+D RH Sbjct: 68 --------DVDGVRFVDLPGYGFAKVSQRERRRWADLIGGYFAQGRSFNLVVSLVDIRHD 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +Q+D+D+ FL + + Y + LTK DKLS ++ L R + +I TSS Sbjct: 120 AQQLDRDMLGFLTENELPYVVALTKADKLSR---ARQSQQAAALARQFGIDRTRMIVTSS 176 Query: 194 VKRKGIEVLRKAILETI 210 GI LR+ I E Sbjct: 177 ETGLGIGELRRVIEEAC 193 >gi|302671760|ref|YP_003831720.1| GTP-binding protein [Butyrivibrio proteoclasticus B316] gi|302396233|gb|ADL35138.1| GTP-binding protein [Butyrivibrio proteoclasticus B316] Length = 200 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PE AF+G+SNVGKSSLIN ++NRKN ARTS PG+TQ +N++ D Sbjct: 16 STLPDNIHPEFAFAGKSNVGKSSLINGIMNRKNYARTSQEPGKTQTINYYNIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYG+AR P+K + WG +I YL L V+LLID RH D + Sbjct: 70 ---EFYLVDLPGYGFARVPEKVKEQWGKMIENYLHTSRQLLRVFLLIDIRHEPSANDVQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + I+ TK DK+ + ++ L + + ++ P S++ ++G + Sbjct: 127 YKWIVHQGFQPVIIATKSDKIKKSQHEKHLNMLRNTLGLPDEI--KIFPYSALSKEGRQE 184 Query: 202 LRKAILETI 210 + + E + Sbjct: 185 IYDFMDELL 193 >gi|224368192|ref|YP_002602355.1| EngB [Desulfobacterium autotrophicum HRM2] gi|259645891|sp|C0QLA5|ENGB_DESAH RecName: Full=Probable GTP-binding protein EngB gi|223690908|gb|ACN14191.1| EngB [Desulfobacterium autotrophicum HRM2] Length = 194 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 112/198 (56%), Gaps = 12/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + + E+AF+GRSNVGKSSLIN L+NRK+L +TS+ PG TQ +NFF+ Sbjct: 8 FIKSATKPSEYTEPLFLEVAFAGRSNVGKSSLINTLINRKSLVKTSSKPGCTQLINFFLL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++LVD+PGYGYA+ KK WG +I RYL+ R TLR + LLID R Sbjct: 68 N---------GNLSLVDLPGYGYAKVSKKIRAQWGPMIERYLTVRETLRAIVLLIDMRRE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ + D+ ++ A+ Y+IVLTK DKLS T Q+ + + +I SS Sbjct: 119 PQREELDLINWFTAHAIPYRIVLTKADKLSKTKQQKNISAIAKGL---GMEQDRLIAFSS 175 Query: 194 VKRKGIEVLRKAILETIN 211 R G + L + + +N Sbjct: 176 KTRLGRDRLWQELDTMLN 193 >gi|332971568|gb|EGK10518.1| ribosome biogenesis GTP-binding protein YsxC [Kingella kingae ATCC 23330] Length = 209 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 98/198 (49%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAQFFTTVNHLKDLPDTQ-AEIAFVGRSNAGKSSAINTLCNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + +VD+PGYGYA+ P+ W L+ YL R +L + L++D Sbjct: 64 FFKLAN---------QHFMVDLPGYGYAQVPEAVRAHWVKLLGDYLQTRQSLLGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K +D + F I+L+K DKLS +TL K ++ + V Sbjct: 115 ARHPLKPLDIQMLDFFALTGRPVHILLSKSDKLSKNEQIKTLSSVKKALKPFMERQTVSV 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + + Sbjct: 175 QLFSSLKKQGIDEVEQVV 192 >gi|299145429|ref|ZP_07038497.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_23] gi|298515920|gb|EFI39801.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 3_1_23] Length = 201 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N Sbjct: 5 SAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYAR +K D +I Y+ ER + +++LID Sbjct: 65 FLIN---------KNWYLVDLPGYGYARRGQKGKDQIHTIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKMNINAYLRELSKQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS R G + I E IN Sbjct: 176 SSSEDRMGRMEILNYI-ENIN 195 >gi|119369238|sp|Q1QE34|ENGB_PSYCK RecName: Full=Probable GTP-binding protein EngB Length = 227 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 99/197 (50%), Gaps = 9/197 (4%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P L P E+AF+GRSN GKSS IN L N++ LAR+S PGRTQ +NFF D Sbjct: 1 MSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQMINFFNVGD 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA P + W + YL RS+L + L+ D RH +K Sbjct: 61 ADR--------RLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMSDIRHPLK 112 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D+ + + + I+LTK DKL ++ L T+ ++ + + S+++ Sbjct: 113 FFDEQMLRWAKDGELPVHILLTKADKLKYGASKNALLNTRKRLKEL-GLNCSIQLFSALR 171 Query: 196 RKGIEVLRKAILETINY 212 ++G++ L + Y Sbjct: 172 KEGLDELAGVMGNWYEY 188 >gi|152978187|ref|YP_001343816.1| GTPase EngB [Actinobacillus succinogenes 130Z] gi|171704208|sp|A6VLN4|ENGB_ACTSZ RecName: Full=Probable GTP-binding protein EngB gi|150839910|gb|ABR73881.1| GTP-binding protein HSR1-related [Actinobacillus succinogenes 130Z] Length = 206 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +S FL I LP+ EIAF+GRSN GKS+ +N L N+KNLARTS Sbjct: 1 MSEIKLNYHKTRFLTSAANIKQLPEDSGIEIAFAGRSNAGKSTALNALTNQKNLARTSKT 60 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N F P LVD+PGYGYA P++ W + YL +R L Sbjct: 61 PGRTQLINLFEV---------EPNCKLVDLPGYGYAAVPEQMKLQWQKSLGEYLQKRECL 111 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V +L+D RH +K +DQ + + + ++LTK DKLS + +T++ + I + Sbjct: 112 GGVVILMDIRHPLKALDQQMIEWAVSADLPLLLLLTKADKLSQSARSKTVKMVREAILPF 171 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V S+ + G++ L + Sbjct: 172 Q-GDIQVETLSAQNKLGVDRLSAKLDAW 198 >gi|116629800|ref|YP_814972.1| GTPase EngB [Lactobacillus gasseri ATCC 33323] gi|238853431|ref|ZP_04643810.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri 202-4] gi|282851696|ref|ZP_06261061.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri 224-1] gi|311110559|ref|ZP_07711956.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri MV-22] gi|122273262|sp|Q042T8|ENGB_LACGA RecName: Full=Probable GTP-binding protein EngB gi|116095382|gb|ABJ60534.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323] gi|238834003|gb|EEQ26261.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri 202-4] gi|282557664|gb|EFB63261.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri 224-1] gi|311065713|gb|EFQ46053.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus gasseri MV-22] Length = 194 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ PK PE A +GRSNVGKSSLIN +VNR+ LARTS PG+TQ LNF+ Sbjct: 8 FVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYKV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ KK ++G +I YL R+ L+ + LL+D RH Sbjct: 68 NN---------ELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++F++ + +V TK+DKL A + +K + + + +P SS Sbjct: 119 PTADDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL-DLKQENVSFLPFSS 177 Query: 194 VKRKGIEVLRKAILETI 210 V + ++ I + + Sbjct: 178 VSKLNVDKFWDWIEDKM 194 >gi|254520127|ref|ZP_05132183.1| GTPase EngB [Clostridium sp. 7_2_43FAA] gi|226913876|gb|EEH99077.1| GTPase EngB [Clostridium sp. 7_2_43FAA] Length = 201 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 98/194 (50%), Gaps = 10/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P G PEIAF GRSNVGKSS+IN L NRK LA+ S PG+T+ +NFF+ Sbjct: 9 FVISAVKKEQYPITGLPEIAFVGRSNVGKSSIINALTNRKKLAKVSQTPGKTRLINFFII 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ K SWG I YL+ R L+ V LL+D RH Sbjct: 69 N--------GDEFYLVDLPGYGYAKVSKTEKASWGKTIETYLNGRQELKRVVLLVDSRHK 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + ++ ++ TK DKLS +++ + + + ++ SS Sbjct: 121 PTADDIQMHEWIKFYGYDEVVIATKSDKLSNNELRKSEKVIRETLN--LGKEDKLYFFSS 178 Query: 194 VKRKGIEVLRKAIL 207 + +KG + L + Sbjct: 179 LNKKGKDELVDNLF 192 >gi|226530446|ref|NP_001151819.1| GTP-binding protein [Zea mays] gi|194700920|gb|ACF84544.1| unknown [Zea mays] gi|195649961|gb|ACG44448.1| GTP-binding protein [Zea mays] Length = 308 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 91/202 (45%), Gaps = 12/202 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P PE A GRSNVGKSSLIN L RK A TS PG+TQ +N F+ Sbjct: 110 FVKSSARARDCPNDDRPEFAVLGRSNVGKSSLINALTRRKEAALTSKKPGKTQTINHFLV 169 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A A + W Y R TL V LLID Sbjct: 170 N---------KSWYLVDLPGYGFAAASQSARMDWSSFTKGYFLNRDTLVGVLLLIDASIP 220 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT---AQETLEKTKYLIRNYPTAHPEVIP 190 ++ID D ++L + + V TK DK+ E +++ I P I Sbjct: 221 PQKIDLDCANWLGRNNIGLTFVFTKCDKVKKGKGGRPDENIKEFHETISGLYPDPPPWIM 280 Query: 191 TSSVKRKGIEVLRKAILETINY 212 TSSV G + L + + NY Sbjct: 281 TSSVTGLGRDGLLLHMSQLRNY 302 >gi|330901524|gb|EGH32943.1| GTP-binding protein YsxC [Pseudomonas syringae pv. japonica str. M301072PT] Length = 211 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLTP-ASLARTSKTPGRTQLLNFFG 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDEDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDVLMLDWAIASNMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFS 184 Query: 193 SVKRKGIEVLRKAILETI 210 + KR G+E + + + Sbjct: 185 APKRMGLEEAYTVLADWM 202 >gi|260438106|ref|ZP_05791922.1| ribosome biogenesis GTP-binding protein YsxC [Butyrivibrio crossotus DSM 2876] gi|292809587|gb|EFF68792.1| ribosome biogenesis GTP-binding protein YsxC [Butyrivibrio crossotus DSM 2876] Length = 197 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 108/189 (57%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP+ PE+AF+G+SNVGKSSLIN ++NRK+ A+TS+ PG+TQ +NF+ + Sbjct: 16 SKLPENTLPEVAFAGKSNVGKSSLINAIMNRKSYAKTSSQPGKTQTINFYNINN------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 VD+PGYGYA+ + WG +I RYLS L+ V+LLID RH + D+ + Sbjct: 70 ---VFYCVDLPGYGYAKTTLETRAKWGKMIERYLSTSKQLQRVFLLIDIRHAPSENDRLM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + I+ TK+DK+ + Q+ ++ + + ++P S+ ++G+E Sbjct: 127 YEWIVSEGYEPVIIATKLDKIKRSQIQKQVKILREGLGMSKEGI--LVPFSAETKQGLEN 184 Query: 202 LRKAILETI 210 + + I + Sbjct: 185 IWEIIDNAV 193 >gi|297569324|ref|YP_003690668.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurivibrio alkaliphilus AHT2] gi|296925239|gb|ADH86049.1| ribosome biogenesis GTP-binding protein YsxC [Desulfurivibrio alkaliphilus AHT2] Length = 200 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 105/197 (53%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ V + LP PEIAF+GRSNVGKSSL+N L+ RKNL + S PG+TQ LNF++ Sbjct: 9 FVDSVFSLAQLPVGDLPEIAFAGRSNVGKSSLLNCLLRRKNLVKVSARPGKTQSLNFYLV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+AR K+ W LI YL R LRCV L+ID RH Sbjct: 69 GD---------QLHLVDLPGYGFARVDKRLQAKWQELITAYLETRPNLRCVVLIIDLRHA 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+ + +L + + + V TK DKLS Q + P + SS Sbjct: 120 LKESDRMLAGWLQAQGIPWLPVYTKKDKLSRNQQQRQARLLDAALGVSPKDR---LLFSS 176 Query: 194 VKRKGIEVLRKAILETI 210 + +G + L + + + Sbjct: 177 LSGEGRQELLERLETYL 193 >gi|237716335|ref|ZP_04546816.1| GTPase EngB [Bacteroides sp. D1] gi|262407938|ref|ZP_06084486.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_22] gi|294646716|ref|ZP_06724339.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD CC 2a] gi|294807755|ref|ZP_06766548.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides xylanisolvens SD CC 1b] gi|229443982|gb|EEO49773.1| GTPase EngB [Bacteroides sp. D1] gi|262354746|gb|EEZ03838.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 2_1_22] gi|292637876|gb|EFF56271.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD CC 2a] gi|294445191|gb|EFG13865.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides xylanisolvens SD CC 1b] Length = 201 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N Sbjct: 5 SAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYAR +K D +I Y+ ER + +++LID Sbjct: 65 FLIN---------KNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKMNINAYLRELGKQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS R G + I E IN Sbjct: 176 SSSEDRTGRVDILNYI-ENIN 195 >gi|163859239|ref|YP_001633537.1| ribosome biogenesis GTP-binding protein YsxC [Bordetella petrii DSM 12804] gi|163262967|emb|CAP45270.1| putative GTP-binding protein [Bordetella petrii] Length = 257 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 102/197 (51%), Gaps = 4/197 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + LP G PE+ F GRSN GKSS IN+L N++ LA +S PGRT+ +N F Sbjct: 59 FFVSAARLDQLPAPGAPEVCFVGRSNAGKSSAINVLCNQRRLAFSSKTPGRTRLINLFGL 118 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L + P LVD+PGYGYA + + W ++ YL +RS+L + L+ID R G Sbjct: 119 PD--PLSPDQPLGFLVDLPGYGYASVAHREKEKWADVLGGYLRDRSSLAGIVLIIDIRRG 176 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + ++D+ + F+ +LTK DKL Q T+ + + + H +P S+ Sbjct: 177 ITELDRRLADFIAPTGRPVLALLTKADKLPYGQRQRTVFAVRKDLADIGALHT--VPFSA 234 Query: 194 VKRKGIEVLRKAILETI 210 +R G+ + I I Sbjct: 235 TERIGLPEATQYIENWI 251 >gi|229587658|ref|YP_002869777.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas fluorescens SBW25] gi|259645904|sp|C3K6T0|ENGB_PSEFS RecName: Full=Probable GTP-binding protein EngB gi|229359524|emb|CAY46365.1| probable GTP-binding protein [Pseudomonas fluorescens SBW25] Length = 213 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 97/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFK 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDDDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGGRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDAITIQLFS 184 Query: 193 SVKRKGIEVLRKAILETI 210 + KR G+E A+ + Sbjct: 185 APKRMGLEDAYTALAGWM 202 >gi|1914833|gb|AAB52537.1| hypothetical GTPase [Neisseria gonorrhoeae] Length = 211 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 7 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL R L + L++D Sbjct: 66 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKELIGLVLIMD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 117 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 176 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + Sbjct: 177 QLFSSLKKQGIDEANRTV 194 >gi|188590593|ref|YP_001921995.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum E3 str. Alaska E43] gi|238691973|sp|B2UX10|ENGB_CLOBA RecName: Full=Probable GTP-binding protein EngB gi|188500874|gb|ACD54010.1| GTP-binding protein [Clostridium botulinum E3 str. Alaska E43] Length = 198 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 97/194 (50%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P E+AF GRSNVGKSSLIN L NRK LA+ S PG+T+ +NFF+ Sbjct: 8 FIISAVKPHQYPIDNRNEVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRLINFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K D+WG I YLS R L+ + L+D RH Sbjct: 68 NN---------DFYLVDLPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ + IV TK DKL +++ + + ++ T + SS Sbjct: 119 PTGDDIMMYEWAKHFGYDVVIVATKSDKLKNAEFKKSEKLIRDTLK--LTKDDKFYFYSS 176 Query: 194 VKRKGIEVLRKAIL 207 + +KG E L + Sbjct: 177 LNKKGTEELIDKLF 190 >gi|319937421|ref|ZP_08011828.1| GTPase engB [Coprobacillus sp. 29_1] gi|319807787|gb|EFW04380.1| GTPase engB [Coprobacillus sp. 29_1] Length = 196 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 11/205 (5%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 ++ F+ P+ PEI +GRSNVGKSS IN + N LA+ S PG+T Sbjct: 1 MYKIHKAQFMLCAAWKSQWPENDLPEICLAGRSNVGKSSFINTITNHSKLAKVSGTPGKT 60 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + LNFF D + LVD+PGYGYA+ K +S+G ++ YL ER L+ + Sbjct: 61 RTLNFFNIND---------ELRLVDVPGYGYAKVNDKIKESFGDMLDTYLRERDVLKGLV 111 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 L++D RH D+ ++ + + +V TK DKL ++ + K + + Sbjct: 112 LIVDYRHKPTHDDKMMYDYAKHYHIPVIVVATKEDKLKRNDLKKNEKIIKDTLG--FDKN 169 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 + SS+ + GI+ + + I+E Sbjct: 170 DIFLRFSSLNKVGIDEVWERIIELC 194 >gi|258647974|ref|ZP_05735443.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella tannerae ATCC 51259] gi|260851815|gb|EEX71684.1| ribosome biogenesis GTP-binding protein YsxC [Prevotella tannerae ATCC 51259] Length = 204 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 99/202 (49%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F + P PE AF GRSNVGKSSLIN+L R LA+TS+ PG+T +N Sbjct: 4 NTAEFKISSARLDQCPATMIPEYAFIGRSNVGKSSLINMLTGRSALAKTSSTPGKTLLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ D LVD+PGYG+A+ KK + +I RY++ R L +++LID Sbjct: 64 HFIIND---------EWFLVDLPGYGFAKRSKKEREELRKMIERYVTRREQLTNLFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R + ID + FL + V + I+ TK DK + ++ ++ P Sbjct: 115 SRLRPQTIDLEFIRFLGEAGVPFSIIFTKADKNKRGVLKSNVQGFLATLKEEWEELPPYF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 +SS + G E + I E IN Sbjct: 175 ISSSTSKLGREDILNYI-EQIN 195 >gi|225076958|ref|ZP_03720157.1| hypothetical protein NEIFLAOT_02010 [Neisseria flavescens NRL30031/H210] gi|224951711|gb|EEG32920.1| hypothetical protein NEIFLAOT_02010 [Neisseria flavescens NRL30031/H210] Length = 231 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 102/203 (50%), Gaps = 11/203 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 23 QNAKFFTTVNHLKDLP-DTPAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 81 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 82 FFELENGN---------FMVDLPGYGYAQVPEAIRAHWVKLLGDYLQQRRQLIGLILIMD 132 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EV 188 RH +K +D + F I+L+K DKLS +TL K ++ Y V Sbjct: 133 SRHPLKALDIQMLDFFHITGRPVHILLSKADKLSKNDQIKTLAAVKKSLKPYTERQKISV 192 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+K++G++ + + + + Sbjct: 193 QLFSSLKKQGMDEVNQVVGSWFD 215 >gi|312958180|ref|ZP_07772703.1| GTP-binding protein [Pseudomonas fluorescens WH6] gi|311287611|gb|EFQ66169.1| GTP-binding protein [Pseudomonas fluorescens WH6] Length = 255 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 68/189 (35%), Positives = 94/189 (49%), Gaps = 10/189 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 57 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFK 115 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 116 LDDDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGGRESLKGLILMMDIRH 166 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 167 PMTDFDLLMLDWAVASGMPMHILLTKADKLTYGAAKNTLLKVQSEIRKGWGDAITIQLFS 226 Query: 193 SVKRKGIEV 201 + KR G+E Sbjct: 227 APKRMGLED 235 >gi|293602589|ref|ZP_06685033.1| ribosome biogenesis GTP-binding protein YsxC [Achromobacter piechaudii ATCC 43553] gi|292819016|gb|EFF78053.1| ribosome biogenesis GTP-binding protein YsxC [Achromobacter piechaudii ATCC 43553] Length = 207 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 4/197 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + LP AG PE+ F GRSN GKS+ IN+L N++ LA +S PGRT+ +N F Sbjct: 9 FLTSAARLDQLPAAGAPEVCFVGRSNAGKSTAINVLCNQRRLAFSSKTPGRTRLINMFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + + ++ LVD+PGYGYA + + W ++ YL +R +L + LLID R G Sbjct: 69 PDPLDPEGHI--GFLVDLPGYGYASVARNEKEKWADILGGYLRDRESLAGIVLLIDIRRG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V ++D+ + +F+ +LTK DKL T+ + + + H IP S+ Sbjct: 127 VTELDRRLANFIAPTGRPVLALLTKADKLPYGQRMRTVFSVRKDLADIGALHT--IPFSA 184 Query: 194 VKRKGIEVLRKAILETI 210 +R G+E I I Sbjct: 185 PERIGLEEAGAHIENWI 201 >gi|303239340|ref|ZP_07325868.1| ribosome biogenesis GTP-binding protein YsxC [Acetivibrio cellulolyticus CD2] gi|302593126|gb|EFL62846.1| ribosome biogenesis GTP-binding protein YsxC [Acetivibrio cellulolyticus CD2] Length = 193 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 104/201 (51%), Gaps = 11/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F +G + P PE+ F GRSNVGKSSLIN L+NRK+LAR ++ PG+T+ +N Sbjct: 4 NNARFEKGAVKPEQYPDNDIPEVTFVGRSNVGKSSLINALLNRKSLARIASKPGKTREIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ D + VD+PGYGYA+ K +WG I YL+E L+ V +L+D Sbjct: 64 FYNIDD---------VLYFVDLPGYGYAKVSKDIKSAWGESIETYLNESKKLKLVVMLVD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + DQ + +L ++ + +V TK DK+ + +E L + +I Sbjct: 115 IRHSPSEDDQMMSKWLTSSSLPFIVVATKKDKIPRSKVKERLSDISNTLELGSGNM--LI 172 Query: 190 PTSSVKRKGIEVLRKAILETI 210 P SS + G E + I + Sbjct: 173 PFSSETKDGREEIMNYIASLV 193 >gi|13124166|sp|O05132|ENGB_NEIGO RecName: Full=Probable GTP-binding protein EngB Length = 209 Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL R L + L++D Sbjct: 64 FFELQNGN---------FMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKELIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL + K L++ Y + V Sbjct: 115 ARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISV 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GI+ + + Sbjct: 175 QLFSSLKKQGIDEANRTV 192 >gi|320353916|ref|YP_004195255.1| ribosome biogenesis GTP-binding protein YsxC [Desulfobulbus propionicus DSM 2032] gi|320122418|gb|ADW17964.1| ribosome biogenesis GTP-binding protein YsxC [Desulfobulbus propionicus DSM 2032] Length = 209 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 82/202 (40%), Positives = 116/202 (57%), Gaps = 14/202 (6%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 F K FL IG LP P+IAF+GRSNVGKSSL+N LV+R NL +TS+ PG+ Sbjct: 2 IDFRK--VQFLLSAHAIGQLPAPVYPDIAFAGRSNVGKSSLLNRLVDRSNLVKTSSKPGK 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ LN+F+ ++ ++ LVD+PGYGYA+ ++ SW GLI Y++ RSTL CV Sbjct: 60 TQSLNYFLVEE---------SLYLVDLPGYGYAQVSQQTRQSWQGLITEYVTTRSTLACV 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 ++ID RH +KQ+D+++ +L Y V TK DKLS + + TA Sbjct: 111 VVIIDLRHELKQLDRELVDWLRYLDTPYLPVYTKADKLSRNQQMKNAAALDAGL--TLTA 168 Query: 185 HPEVIPTSSVKRKGIEVLRKAI 206 +I SS +G++ LR + Sbjct: 169 DDRII-FSSSTGQGLDSLRSRL 189 >gi|168047724|ref|XP_001776319.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672279|gb|EDQ58818.1| predicted protein [Physcomitrella patens subsp. patens] Length = 222 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 98/205 (47%), Gaps = 14/205 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F++ + P G PE A GRSNVGKSSLIN LV RK LA+TS PG+TQ +N Sbjct: 21 KSAEFIKSSSKESECPSEGYPEFALVGRSNVGKSSLINSLVLRKELAQTSKKPGKTQLIN 80 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYG+A+AP W Y +R TL CV LL+D Sbjct: 81 HFLIN---------KKWYLVDLPGYGFAKAPTAVRTDWNEFTKDYFLQRETLACVLLLVD 131 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTA 184 +QID D +L + + IV TK D+ QE +E ++ Sbjct: 132 ASIEPQQIDLDCVDWLGRNKIPVTIVFTKCDRKKKKKNGGRKPQENIEDFLDRLKPLYDE 191 Query: 185 HPEVIPTSSVKRKGIEVLRKAILET 209 P + TSS +G E L + I + Sbjct: 192 IPPWVMTSSATNQGREELLRHIAQL 216 >gi|295084381|emb|CBK65904.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Bacteroides xylanisolvens XB1A] Length = 201 Score = 215 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N Sbjct: 5 SAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYAR +K D +I Y+ ER + +++LID Sbjct: 65 FLIN---------KNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKMNINAYLRELGKQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS R G + I E IN Sbjct: 176 SSSEDRTGRMDILNYI-ENIN 195 >gi|254448947|ref|ZP_05062402.1| GTP-binding protein [gamma proteobacterium HTCC5015] gi|198261484|gb|EDY85774.1| GTP-binding protein [gamma proteobacterium HTCC5015] Length = 209 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 10/205 (4%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 T ++ I LP EIAF+GRSN GKSS IN + ++ LA+ S PGRTQ Sbjct: 13 TYQKAHYVHSAHNIDQLPPERGLEIAFAGRSNAGKSSAINAITHQNRLAKVSKTPGRTQM 72 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF + +VD+PGYG+A+ P + W + RYL+ R TL + ++ Sbjct: 73 INFFALDEDR---------HIVDLPGYGFAKVPLSVKNHWVETLERYLAARQTLVALVIV 123 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +D RH +++ D + + + ++LTK DKL A + L + + Sbjct: 124 MDIRHPLREQDWQMIQWAQSSRIELHLLLTKADKLKRGAANQQLFAVQKALSE-AGVEAS 182 Query: 188 VIPTSSVKRKGIEVLRKAILETINY 212 + S+ KR+GI+ + + E Y Sbjct: 183 LQTFSATKREGIDDIHGLMDEWFKY 207 >gi|257453676|ref|ZP_05618963.1| ribosome biogenesis GTP-binding protein YsxC [Enhydrobacter aerosaccus SK60] gi|257448910|gb|EEV23866.1| ribosome biogenesis GTP-binding protein YsxC [Enhydrobacter aerosaccus SK60] Length = 232 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 98/198 (49%), Gaps = 9/198 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ P L P E+AF+GRSN GKSS IN L ++ LAR+S PGRTQ +NFF Sbjct: 27 QFMLSAPTFKLCPADTGREVAFAGRSNAGKSSCINALTQQRQLARSSKTPGRTQMINFFN 86 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA P+ W + +YL R +L + LL D RH Sbjct: 87 MGNL--------DQRLVDLPGYGYAAVPEAMKKEWQSELEKYLISRKSLAGLVLLTDIRH 138 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +K D+ + + + ++LTK DKL A+ TL++T+ + + S Sbjct: 139 PLKFFDEQMLHWAKDGELEVHVLLTKADKLKYGAAKNTLQQTRNQLNKLKLPF-SIQLFS 197 Query: 193 SVKRKGIEVLRKAILETI 210 + R G+E L + + Sbjct: 198 AQDRIGLEELSLKLGNWL 215 >gi|261365666|ref|ZP_05978549.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria mucosa ATCC 25996] gi|288565832|gb|EFC87392.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria mucosa ATCC 25996] Length = 217 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 76/201 (37%), Positives = 103/201 (51%), Gaps = 11/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + S +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 64 FFELSNGS---------FMVDLPGYGYAQVPEAIRTHWVKLLGDYLQQRRQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL K ++ Y T V Sbjct: 115 ARHPLKELDLRMLDFFHITGRPVHILLSKADKLSKNEQIKTLGTVKKSLKPYMTRQRISV 174 Query: 189 IPTSSVKRKGIEVLRKAILET 209 SS+K++GIE + + + E Sbjct: 175 QLFSSLKKQGIEEVNQVVGEW 195 >gi|28867574|ref|NP_790193.1| GTP-binding protein EngB [Pseudomonas syringae pv. tomato str. DC3000] gi|213971017|ref|ZP_03399138.1| GTP-binding protein EngB [Pseudomonas syringae pv. tomato T1] gi|301385580|ref|ZP_07233998.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. tomato Max13] gi|302058836|ref|ZP_07250377.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. tomato K40] gi|302132135|ref|ZP_07258125.1| ribosome biogenesis GTP-binding protein YsxC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|38372197|sp|Q88AP4|ENGB_PSESM RecName: Full=Probable GTP-binding protein EngB gi|28850809|gb|AAO53888.1| GTP-binding protein EngB [Pseudomonas syringae pv. tomato str. DC3000] gi|213924253|gb|EEB57827.1| GTP-binding protein EngB [Pseudomonas syringae pv. tomato T1] gi|331014879|gb|EGH94935.1| GTP-binding protein YsxC [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 211 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 94/189 (49%), Gaps = 10/189 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFG 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDEDR---------RLVDLPGYGYAKVPIPLKLHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I+LTK DKL+ A+ TL K + IR + S Sbjct: 125 PMTDFDLLMLDWAIASHMPMHILLTKADKLTYGAAKNTLLKVQAEIRKGWGDAVSIQLFS 184 Query: 193 SVKRKGIEV 201 + KR G+E Sbjct: 185 APKRMGLEE 193 >gi|160886050|ref|ZP_02067053.1| hypothetical protein BACOVA_04056 [Bacteroides ovatus ATCC 8483] gi|156108863|gb|EDO10608.1| hypothetical protein BACOVA_04056 [Bacteroides ovatus ATCC 8483] Length = 201 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N Sbjct: 5 SAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYAR +K D +I Y+ ER + +++LID Sbjct: 65 FLIN---------KNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKMNINAYLRELGKQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS R G + I E IN Sbjct: 176 SSSEDRTGRIDILNYI-ENIN 195 >gi|284800140|ref|ZP_05985804.2| ribosome biogenesis GTP-binding protein YsxC [Neisseria subflava NJ9703] gi|284795853|gb|EFC51200.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria subflava NJ9703] Length = 231 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 102/203 (50%), Gaps = 11/203 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 23 QNAKFFTTVNHLKDLP-DTPAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 81 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 82 FFELENGN---------FMVDLPGYGYAQVPEAIRAHWVKLLGDYLQQRRQLIGLILIMD 132 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EV 188 RH +K +D + F I+L+K DKLS +TL K ++ Y V Sbjct: 133 SRHPLKALDIQMLDFFHITGRPVHILLSKADKLSKNDQIKTLAAVKKSLKPYTDRQKISV 192 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+K++G+E + + + + Sbjct: 193 QLFSSLKKQGMEEVNQVVGSWFD 215 >gi|83595990|gb|ABC25349.1| GTP-binding protein [uncultured marine bacterium Ant29B7] Length = 215 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 94/196 (47%), Gaps = 8/196 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P PE AF GRSNVGKSSLIN LV K LA+ S PG+TQ +N F Sbjct: 16 FIKSSARNEECPDLHVPEYAFIGRSNVGKSSLINRLVGNKYLAKISGRPGKTQLINHFSI 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D ALVD+PGYGYA+ K + +I YL R L V++L+D RH Sbjct: 76 ED--------GQWALVDLPGYGYAKVSKIQRTEFSRMIAYYLRNRKNLVNVFVLVDGRHE 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +++D L + + IV TK+DKLS + + + + P + TS+ Sbjct: 128 PQKLDLAFVKKLGNWGIPFSIVFTKMDKLSNSDSGKNQALMNSTLLKEWDNLPPMFLTSA 187 Query: 194 VKRKGIEVLRKAILET 209 G L I + Sbjct: 188 ESGLGRSELLAYISKL 203 >gi|311109562|ref|YP_003982415.1| ribosome biogenesis GTP-binding protein [Achromobacter xylosoxidans A8] gi|310764251|gb|ADP19700.1| ribosome biogenesis GTP-binding protein [Achromobacter xylosoxidans A8] Length = 207 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 4/197 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + LP AG PE+ F GRSN GKS+ IN+L N++ LA +S PGRT+ +N F Sbjct: 9 FLTSAARLDQLPAAGAPEVCFVGRSNAGKSTAINVLCNQRRLAFSSKTPGRTRLINMFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + + ++ LVD+PGYGYA + + W ++ YL +R +L + LLID R G Sbjct: 69 PDPLDPEGHI--GFLVDLPGYGYASVARNEKEKWADILGGYLRDRESLVGIVLLIDIRRG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V ++D+ + +F+ +LTK DKL T+ + + + H IP S+ Sbjct: 127 VTELDRRLANFIAPTGRPVLALLTKADKLPYGQRMRTVFSVRKDLADIGALHT--IPFSA 184 Query: 194 VKRKGIEVLRKAILETI 210 +R G+E I I Sbjct: 185 PERIGLEEAGAHIENWI 201 >gi|269120910|ref|YP_003309087.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis ATCC 33386] gi|268614788|gb|ACZ09156.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis ATCC 33386] Length = 204 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 106/195 (54%), Gaps = 13/195 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ I P+ E AF GRSNVGKSSLIN L NR+NLARTS PGRTQ +NFF Sbjct: 8 FIKSAVVINDYPETTEIEFAFIGRSNVGKSSLINSLTNRRNLARTSKTPGRTQLINFFDV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+A+ P+ +WG +I YL+ + V+LL+D R Sbjct: 68 NE---------DFYFVDLPGYGFAKVPEAVKKNWGKIIADYLNSDRE-KIVFLLLDIRRV 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ +L+ +++Y I+ TK DKLS + L++ K + + +V S+ Sbjct: 118 PSAEDIEMLKWLEHYSINYYIIFTKTDKLSNNQKFKQLKEIKKKLE---FDNKDVFFYSA 174 Query: 194 VKRKGIEVLRKAILE 208 +K G E L + I + Sbjct: 175 LKNTGREELEEFIFD 189 >gi|319639426|ref|ZP_07994176.1| GTP-binding protein engB [Neisseria mucosa C102] gi|317399321|gb|EFV79992.1| GTP-binding protein engB [Neisseria mucosa C102] Length = 213 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 102/203 (50%), Gaps = 11/203 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 64 FFELENGN---------FMVDLPGYGYAQVPEAIRAHWVKLLGDYLQQRRQLIGLILIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EV 188 RH +K +D + F I+L+K DKLS +TL K ++ Y V Sbjct: 115 SRHPLKALDIQMLDFFHITGRPVHILLSKADKLSKNDQIKTLAAVKKSLKPYTDRQKISV 174 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+K++G++ + + + + Sbjct: 175 QLFSSLKKQGMDEVNQVVGSWFD 197 >gi|292670223|ref|ZP_06603649.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas noxia ATCC 43541] gi|292648175|gb|EFF66147.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas noxia ATCC 43541] Length = 202 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 3/200 (1%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 ++L P+ G P +AF GRSNVGKSSLIN L + LAR S+ PG+TQ +NF Sbjct: 4 KAVYLASAVRRDQYPEEGRPAVAFIGRSNVGKSSLINSLTRIRQLARVSSKPGKTQTINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + + ++ LVD+PGYGYA+A + + W I YL + LR V LL+D Sbjct: 64 YELLLRIDGGAERYSVHLVDLPGYGYAKAARDSRKVWAKFIEEYLLYAAELRFVCLLLDI 123 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D+ +FS+L + + ++ TK DK+ + + + + R+ V+P Sbjct: 124 RHTPMESDRRMFSWLVEHNIPVLVIATKSDKIGRNARRARIAEIQ---RSLGVPELTVLP 180 Query: 191 TSSVKRKGIEVLRKAILETI 210 +S K +G L + E + Sbjct: 181 YASPKNEGRSELLDVMKEYL 200 >gi|293373048|ref|ZP_06619417.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD CMC 3f] gi|292632116|gb|EFF50725.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides ovatus SD CMC 3f] Length = 201 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N Sbjct: 5 SAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYAR +K D +I Y+ ER + +++LID Sbjct: 65 FLIN---------KNWYLVDLPGYGYARRGQKGKDQIRTIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKMNINAYLRELSKQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS R G + I E IN Sbjct: 176 SSSEDRTGRIDILNYI-ENIN 195 >gi|315650625|ref|ZP_07903685.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium saburreum DSM 3986] gi|315487122|gb|EFU77444.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium saburreum DSM 3986] Length = 197 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 67/189 (35%), Positives = 104/189 (55%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P PEI F+G+SNVGKSSLIN L+NRK+LARTS PG+TQ +N++ D Sbjct: 16 SKFPDNSEPEIVFAGKSNVGKSSLINALMNRKSLARTSGKPGKTQTINYYKVND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA A + WG +I RYL ++C++LLID RH + D+ + Sbjct: 70 ---EIYFVDLPGYGYANANLATREKWGKMIERYLHTSKQIKCIFLLIDIRHEPGKNDKQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ S I+ TK+DKL + + ++ + + +IP SS ++G + Sbjct: 127 YDWIVYNGYSPVIIATKLDKLKRSQIAKCIKTLREGLGLQKEVV--LIPFSSETKQGKKE 184 Query: 202 LRKAILETI 210 + + I + Sbjct: 185 VYEFIENLL 193 >gi|190149362|ref|YP_001967887.1| GTP-binding protein EngB [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189914493|gb|ACE60745.1| putative GTP-binding protein EngB [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 180 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 67/172 (38%), Positives = 97/172 (56%), Gaps = 10/172 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EIAF+GRSN GKS+ +N L N+KNLARTS PGRTQ +N F P LVD Sbjct: 2 EIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFEV---------EPNCKLVD 52 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA P++ W + YL +R LR V +L+D RH +K +DQ + + + Sbjct: 53 LPGYGYAAVPEQMKLQWQKALGEYLQKRECLRGVVILMDIRHPLKDLDQQMIEWAVSAQL 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++LTK DKLS + +T++ + I + +V S++ + GI+ L Sbjct: 113 PVLLLLTKADKLSQSARSKTVKMVREAILPFQ-GDIQVEAYSALNKVGIDKL 163 >gi|187935182|ref|YP_001887073.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium botulinum B str. Eklund 17B] gi|238691648|sp|B2TPB6|ENGB_CLOBB RecName: Full=Probable GTP-binding protein EngB gi|187723335|gb|ACD24556.1| GTP-binding protein [Clostridium botulinum B str. Eklund 17B] Length = 198 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 97/194 (50%), Gaps = 11/194 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P E+AF GRSNVGKSSLIN L NRK LA+ S PG+T+ +NFF+ Sbjct: 8 FIISAVKPHQYPIDHRNEVAFVGRSNVGKSSLINSLTNRKKLAKVSGTPGKTRLINFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K D+WG I YLS R L+ + L+D RH Sbjct: 68 NN---------DFYLVDLPGYGYAKVSKSEKDTWGKTIETYLSHREELKRIVCLVDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ + +V TK DKL +++ + + + T ++ SS Sbjct: 119 PTGDDIMMYEWAKHFGYDVVVVATKSDKLKNAEFKKSEKLIRETLN--LTKDDKLYFYSS 176 Query: 194 VKRKGIEVLRKAIL 207 + +KG E L + Sbjct: 177 LNKKGTEELIDKLF 190 >gi|119369237|sp|Q4FV29|ENGB_PSYA2 RecName: Full=Probable GTP-binding protein EngB Length = 232 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 99/197 (50%), Gaps = 9/197 (4%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P L P E+AF+GRSN GKSS IN L N++ LAR+S PGRTQ +NFF D Sbjct: 1 MSAPTFRLCPADIGLEVAFAGRSNAGKSSAINALTNQRQLARSSKTPGRTQMINFFNVGD 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA P + W + YL RS+L + L+ D RH +K Sbjct: 61 ADR--------RLVDLPGYGYAAVPLEMKKEWQVELEEYLVSRSSLAGLVLMTDIRHPLK 112 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D+ + + + I+LTK DKL ++ L T+ ++ + + S+++ Sbjct: 113 FFDEQMLRWAKDGELPVHILLTKADKLKYGASKNALLNTRKRLKQL-GLNCSIQLFSALR 171 Query: 196 RKGIEVLRKAILETINY 212 ++G++ L + Y Sbjct: 172 KEGLDELAGVMGNWYEY 188 >gi|116751466|ref|YP_848153.1| HSR1-related GTP-binding protein [Syntrophobacter fumaroxidans MPOB] gi|116700530|gb|ABK19718.1| GTP-binding protein, HSR1-related [Syntrophobacter fumaroxidans MPOB] Length = 198 Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 95/202 (47%), Gaps = 12/202 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F G P PE+AF+GRSNVGKSSLIN L+ R+ L RTS PG+TQ +N Sbjct: 8 KSAEFKTAAVRSGQYPDDHLPEVAFAGRSNVGKSSLINCLLQRRKLVRTSRTPGQTQTIN 67 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF+ VD+PGYG+AR P WG ++ YL R LR V ++D Sbjct: 68 FFLINGL---------FYCVDLPGYGFARVPMAVRAQWGPMVESYLGGRPNLRGVVQILD 118 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D ++++L + + VLTK DK+ T + + ++ Sbjct: 119 ARHPPSPDDLKLWNWLIDRKIPAVPVLTKADKVPRTKWDAAASRASLSL---GIPRDRLL 175 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 SS R G + L + I+ Sbjct: 176 LFSSETRHGRDALLLQVAAWID 197 >gi|237720986|ref|ZP_04551467.1| GTPase EngB [Bacteroides sp. 2_2_4] gi|229449821|gb|EEO55612.1| GTPase EngB [Bacteroides sp. 2_2_4] Length = 201 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N Sbjct: 5 SAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYAR +K + +I Y+ ER + +++LID Sbjct: 65 FLIN---------KNWYLVDLPGYGYARRGQKGKNQIRTIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKMNINAYLRELGKQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS R G + I E IN Sbjct: 176 SSSEDRTGRVDILNYI-ENIN 195 >gi|104773863|ref|YP_618843.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513870|ref|YP_812776.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|119369207|sp|Q1GAP7|ENGB_LACDA RecName: Full=Probable GTP-binding protein EngB gi|122275360|sp|Q04B34|ENGB_LACDB RecName: Full=Probable GTP-binding protein EngB gi|103422944|emb|CAI97606.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093185|gb|ABJ58338.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125527|gb|ADY84857.1| GTP-binding protein ENGB family [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 200 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 7/193 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + P+ G EIA +GRSNVGKSS IN L+ RKNLARTS++PG+TQ LNF+ Sbjct: 8 FSVSAVKASQYPEGGLDEIALAGRSNVGKSSFINTLLQRKNLARTSSSPGKTQTLNFYRV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD+PGYGYA+ KK + +G +I YL R+ L+ + L+ID RH Sbjct: 68 D------SDQADFYLVDVPGYGYAKVSKKQREEFGEMIQDYLETRAYLKGLILMIDGRHE 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ + + +V TK+DK+ +T + + N + +P SS Sbjct: 122 PTVDDIAMYDYAQYLNLPILLVATKMDKIKKNAFNKTEAAFRKHL-NLNKDNVTFLPFSS 180 Query: 194 VKRKGIEVLRKAI 206 V + ++ ++ I Sbjct: 181 VTKLNVDQVKDWI 193 >gi|295100722|emb|CBK98267.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Faecalibacterium prausnitzii L2-6] Length = 204 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 99/200 (49%), Gaps = 12/200 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ LP++ PE++FSGRSNVGKSSLIN L NRKNLAR S+ PG+T Sbjct: 1 MNYNKADFIASYGISSQLPESDRPELSFSGRSNVGKSSLINKLCNRKNLARVSSTPGKTA 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ D VD+PGYGYA+ + + W LI Y + + Sbjct: 61 TINFYAVDD----------CYFVDLPGYGYAKVSNADRERWDDLINSYFEAQRHHTLLVQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LIDCRH D + +L + + + LTK DKL + +T E+ + L P Sbjct: 111 LIDCRHAPSADDIQMLHYLHYHNIPFVVALTKADKLKKSQLAQTREEFETLC--LPYGCQ 168 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 +V+ TS GI L+ + Sbjct: 169 KVVLTSGESGCGIPELQAVL 188 >gi|114327391|ref|YP_744548.1| ribosome biogenesis GTP-binding protein YsxC [Granulibacter bethesdensis CGDNIH1] gi|119369200|sp|Q0BU77|ENGB_GRABC RecName: Full=Probable GTP-binding protein EngB gi|114315565|gb|ABI61625.1| GTP-binding protein YihA [Granulibacter bethesdensis CGDNIH1] Length = 223 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 89/195 (45%), Positives = 108/195 (55%), Gaps = 9/195 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F G + LP EIAF+GRSNVGKS+L+N L RK LAR S+ PGRT+ LNFF Sbjct: 34 TFFHGTQRLDQLPPPMGVEIAFAGRSNVGKSTLVNALTGRKTLARASSQPGRTKQLNFFN 93 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D + LVDMPGYGYA+A K + W GL+ YL R LR V LL+D R Sbjct: 94 LAD---------QLVLVDMPGYGYAQAAKDVKEDWQGLMFSYLRGRPNLRRVMLLVDARV 144 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 K D V LDK AV++Q+V+TK D + PT Q + R +P AHP V TS Sbjct: 145 EFKASDIAVMELLDKAAVTFQLVVTKADAVKPTPLQRRVADVYAAARAHPAAHPHVFVTS 204 Query: 193 SVKRKGIEVLRKAIL 207 S GI LR A+ Sbjct: 205 SDTGSGIAELRAALA 219 >gi|33594513|ref|NP_882157.1| GTPase EngB [Bordetella pertussis Tohama I] gi|33594785|ref|NP_882428.1| GTPase EngB [Bordetella parapertussis 12822] gi|33599057|ref|NP_886617.1| GTPase EngB [Bordetella bronchiseptica RB50] gi|81578317|sp|Q7VTA1|ENGB_BORPE RecName: Full=Probable GTP-binding protein EngB gi|81578960|sp|Q7W2C4|ENGB_BORPA RecName: Full=Probable GTP-binding protein EngB gi|81580336|sp|Q7WR92|ENGB_BORBR RecName: Full=Probable GTP-binding protein EngB gi|33564589|emb|CAE43906.1| putative GTP-binding protein [Bordetella pertussis Tohama I] gi|33564861|emb|CAE39805.1| putative GTP-binding protein [Bordetella parapertussis] gi|33575103|emb|CAE30566.1| putative GTP-binding protein [Bordetella bronchiseptica RB50] gi|332383924|gb|AEE68771.1| ribosome biogenesis GTP-binding protein YsxC [Bordetella pertussis CS] Length = 207 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 4/197 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + LP AG PE+ F GRSN GKSS IN+L N++ LA +S PGRT+ +N F Sbjct: 9 FYISAARLDQLPPAGAPEVCFVGRSNAGKSSAINVLCNQRRLAFSSKTPGRTRLINMFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L LVD+PGYGYA + + W ++ YL +R++L + LLID R G Sbjct: 69 PD--PLAPGEQLGFLVDLPGYGYASVAHREKEKWADILGGYLRDRASLAGIVLLIDIRRG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V +D+ + +F+ +LTK DKL T+ + + + H ++P SS Sbjct: 127 VTDLDRRLTNFIAPTGRPVLALLTKADKLPYGQRMRTVFAVRKDLADIGALH--MVPFSS 184 Query: 194 VKRKGIEVLRKAILETI 210 +R G+E I I Sbjct: 185 TERIGLEEAGAHIENWI 201 >gi|241759405|ref|ZP_04757509.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria flavescens SK114] gi|241320187|gb|EER56520.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria flavescens SK114] Length = 213 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 102/203 (50%), Gaps = 11/203 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF ++ + +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 64 FFELENGN---------FMVDLPGYGYAQVPEAIRTHWVKLLGDYLQQRRQLIGLILIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EV 188 RH +K +D + F I+L+K DKLS +TL K ++ Y V Sbjct: 115 SRHPLKALDIQMLDFFHITGRPVHILLSKADKLSKNDQIKTLAAVKKSLKPYTERQKISV 174 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+K++G++ + + + + Sbjct: 175 QLFSSLKKQGMDEVNQVVGSWFD 197 >gi|218962058|ref|YP_001741833.1| putative GTP-binding protein engB [Candidatus Cloacamonas acidaminovorans] gi|167730715|emb|CAO81627.1| putative GTP-binding protein engB [Candidatus Cloacamonas acidaminovorans] Length = 203 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 3/189 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ E P + PE AF+GRSNVGKS+LIN+L N K LA+TS+ PG+T+ LNFF+ Sbjct: 9 FVKSAIEPSDYPASAYPEFAFAGRSNVGKSTLINLLTNHKGLAKTSSTPGKTRLLNFFLI 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + ++ + D+PGYGYA + + W +I +Y +R LR + +++D RH Sbjct: 69 RYKIDDNDSSGFLQFTDLPGYGYAEVSQAEQEKWRRMINKYFEQRKQLRSLIVIVDIRHP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + L + + Y IV TK DK+ T +T K L + + P S+ Sbjct: 129 ADSKDIMLLEMLRLRGIDYCIVATKADKIPKTKVAKT---VKDLAKGLGLKEEPIFPVSA 185 Query: 194 VKRKGIEVL 202 + G+E L Sbjct: 186 LNNTGLEPL 194 >gi|261856751|ref|YP_003264034.1| ribosome biogenesis GTP-binding protein YsxC [Halothiobacillus neapolitanus c2] gi|261837220|gb|ACX96987.1| ribosome biogenesis GTP-binding protein YsxC [Halothiobacillus neapolitanus c2] Length = 227 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 11/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P L E+AF+GRSN GKS+++N LV +K+LARTS PGRTQ +N F Sbjct: 9 FIKSAPSPKELTADFGAEVAFAGRSNAGKSTVLNALVGQKSLARTSRTPGRTQLINLFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D S LVD+PGYGYA+ P+ WG + Y +ER +L V +++D RH Sbjct: 69 SDESR--------RLVDLPGYGYAKVPEAMRRRWGEALAAYFAERRSLAGVVVIMDIRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ D+ + + + + +L K DKLS +T+ K + A +P S Sbjct: 121 LKETDRQMIEYAQDRQLPVLCLLNKADKLSQNEISKTVFALK---KEASLAAVHWLPFSG 177 Query: 194 VKRKGIEVLRKAILETIN 211 ++ G+ R + E +N Sbjct: 178 LRGSGVPQARTILDEWLN 195 >gi|329120860|ref|ZP_08249519.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria bacilliformis ATCC BAA-1200] gi|327459670|gb|EGF06012.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria bacilliformis ATCC BAA-1200] Length = 211 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 101/200 (50%), Gaps = 11/200 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F V + LP G EIAF GRSN GKSS IN L ++ LA S PGRTQH+NF Sbjct: 6 NAKFFTTVNRLQDLPDTG-AEIAFVGRSNAGKSSAINTLCDQVRLAYVSKTPGRTQHINF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F ++ + + D+PGYGYA+ P+ W GL+ YL R L + L++DC Sbjct: 65 FELQNGA---------FMADLPGYGYAQVPEAVRRHWVGLLGEYLRTRRQLIGLVLIMDC 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVI 189 RH +K +D + F I+L+K DKLS +TL K ++ + V Sbjct: 116 RHPLKPLDVQMLDFFAPTGRPVHILLSKADKLSKNDQIKTLSSVKKALKPFSRHGQVSVQ 175 Query: 190 PTSSVKRKGIEVLRKAILET 209 SS+K++G++ + + Sbjct: 176 LFSSLKKQGVDEVNTTVARW 195 >gi|294461092|gb|ADE76113.1| unknown [Picea sitchensis] Length = 335 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 100/204 (49%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F+ Sbjct: 137 FIKSSSRVEECPMNGYPEFALVGRSNVGKSSLVNSLVRRKQLAMTSKKPGKTQLINHFLI 196 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA AP+ W Y R L CV LLID Sbjct: 197 NN---------SWYLVDLPGYGYAIAPRAVRTEWNAFTKDYFLNRKALVCVLLLIDASIP 247 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 K+ID + ++L + + V TK DK +E + + LIR + P Sbjct: 248 AKEIDIECATWLGQNQIPMAFVFTKCDKRKKRKNGNKRPEENIYDFQNLIREFYQETPPW 307 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TSSV +G + L I + NY Sbjct: 308 IMTSSVTNQGRDELLLHIAQLKNY 331 >gi|257784166|ref|YP_003179383.1| small GTP-binding protein [Atopobium parvulum DSM 20469] gi|257472673|gb|ACV50792.1| small GTP-binding protein [Atopobium parvulum DSM 20469] Length = 194 Score = 213 bits (544), Expect = 9e-54, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 13/197 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 + I LP PE+AF GRSNVGKSSL+N L+ RK LAR S+ PG+T ++NFF Sbjct: 9 QYEASYGTISQLPSPETPEVAFVGRSNVGKSSLLNKLIGRKQLARVSSVPGKTANINFF- 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 ++ + VD+PGYG+AR ++ W LI Y + + V L+D RH Sbjct: 68 ---------DVDGVKFVDLPGYGFARVSRQEKQRWADLIGGYFEQERSFNLVISLVDIRH 118 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +++D + +FL + + + + TK DK++ + + P + I TS Sbjct: 119 EAQKLDLQMINFLQEAELPFVVAFTKADKIARGKQNQAAAALRKAFHITPE---QTIITS 175 Query: 193 SVKRKGIEVLRKAILET 209 S GI+ LR+ I + Sbjct: 176 SETGLGIDELRRRIEDA 192 >gi|257439111|ref|ZP_05614866.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium prausnitzii A2-165] gi|257198489|gb|EEU96773.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium prausnitzii A2-165] Length = 203 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 99/204 (48%), Gaps = 12/204 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ LP++ PE++FSGRSNVGKSSLIN L NRKNLAR S+ PG+T Sbjct: 1 MNYNKADFIASYGISSQLPESDRPELSFSGRSNVGKSSLINKLCNRKNLARVSSTPGKTA 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ + VD+PGYGYA+ + + W LI Y + Sbjct: 61 TINFYEVDN----------CYFVDLPGYGYAKVSNADRERWDDLINSYFEAPRHHTLLVQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LIDCRH D + +L + + + LTK DKL + +T E + + P Sbjct: 111 LIDCRHAPSADDLQMLKYLHYHQIPFVVALTKADKLKKSQLAKTQEDFEKVC--LPYGCQ 168 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 +V+ TS GI L+ + E + Sbjct: 169 KVVLTSGENGYGIPELQAVLNEAV 192 >gi|88798525|ref|ZP_01114109.1| predicted GTPase [Reinekea sp. MED297] gi|88778625|gb|EAR09816.1| predicted GTPase [Reinekea sp. MED297] Length = 207 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 9/196 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + FL + P E+AF+GRSN GKSS +N L LARTS PGRTQ LNF Sbjct: 7 SAQFLTSAAKFSQCPTDTGAEVAFAGRSNAGKSSALNALTRNSKLARTSKTPGRTQLLNF 66 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F LVD+PGYGYA+ + W I YL+ER +LR + L++D Sbjct: 67 FTLSS--------DEHRLVDLPGYGYAKVNRNMKQDWEEHIGEYLAERLSLRGLVLVMDI 118 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + + DQ + + + + +LTK DKL A+ T K + ++ + Sbjct: 119 RHPMTEFDQMIIDWAVETEMPLLALLTKADKLKRGPAKSTWLKVRNQLQTR-APWLDAQM 177 Query: 191 TSSVKRKGIEVLRKAI 206 S++K+ G+ L + + Sbjct: 178 FSALKKDGVSDLTRWL 193 >gi|198275301|ref|ZP_03207832.1| hypothetical protein BACPLE_01460 [Bacteroides plebeius DSM 17135] gi|198271884|gb|EDY96154.1| hypothetical protein BACPLE_01460 [Bacteroides plebeius DSM 17135] Length = 203 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 9/198 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + P+ PE AF GRSNVGKSSLIN+L LA TS PG+T +N Sbjct: 5 SAEFVVSNSRADMCPQTHLPEYAFIGRSNVGKSSLINMLTKNPKLAMTSATPGKTLLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYA+ KK ++ LI Y+ ER + C+++LID Sbjct: 65 FLIN---------KEWYLVDLPGYGYAQRGKKMMEKIQKLIEYYVLEREQMTCLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + ++ TK DK S + ++ + ++ P Sbjct: 116 RLEPQRIDLEFIEWLGENGIPFALIFTKADKQSVGKTKASVNRFLDTLKEQWEELPPHFI 175 Query: 191 TSSVKRKGIEVLRKAILE 208 +SS + G + + I + Sbjct: 176 SSSENKTGRQEILDYIEQ 193 >gi|312795810|ref|YP_004028732.1| GTP-binding protein YihA [Burkholderia rhizoxinica HKI 454] gi|312167585|emb|CBW74588.1| GTP-binding protein YihA [Burkholderia rhizoxinica HKI 454] Length = 251 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 9/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP PE+AF+GRSN GKS+ IN+L N+K LA S PGRTQH+N+F Sbjct: 38 FFTTVNHLRDLPATIQPEVAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFAI 97 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P LVD+PGYGYA P W L+ YL+ R +R + L++D R Sbjct: 98 G-----PADAPVAHLVDLPGYGYAEVPGAAKAHWEALLSTYLTTRPQIRGLILMMDSRRP 152 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA----HPEVI 189 ++D+ + + A ++LTK DKL+ + L + Y A + Sbjct: 153 FTELDRRMVEWFGATARPIHVLLTKCDKLTRQESTNALRAAQKAATAYQAAGLRSEITIQ 212 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S++KR G++ + + Sbjct: 213 LFSALKRIGLDQAHTQLEHWL 233 >gi|218290818|ref|ZP_03494887.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1] gi|218239176|gb|EED06377.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1] Length = 220 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 13/186 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 PK PE AF GRSNVGKS+L+N L+NRK LAR S+ PG+T+ +NF++ Sbjct: 16 DQWPKTMLPEFAFLGRSNVGKSTLLNRLLNRKQLARVSSQPGKTRQINFYLINQ------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA K+ + +I RYL++R LR ++ LID RH + D V Sbjct: 70 ---SFRFVDLPGYGYAAVSKQERQRFAAMIDRYLNDRECLRRIFHLIDIRHEPTKDDVAV 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + L + V +V TK DK+ + + ++ + +R ++ P S+ KR G+E Sbjct: 127 HAALLELGVPVSVVATKADKIGRSHVPKHVKVIRETLR----TPVDIWPVSAEKRTGLEA 182 Query: 202 LRKAIL 207 L + Sbjct: 183 LWAVME 188 >gi|298369922|ref|ZP_06981238.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria sp. oral taxon 014 str. F0314] gi|298281382|gb|EFI22871.1| ribosome biogenesis GTP-binding protein YsxC [Neisseria sp. oral taxon 014 str. F0314] Length = 215 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 103/204 (50%), Gaps = 12/204 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + K+A F V + LP P EIAF GRSN GKSS IN L LA S PGRTQ Sbjct: 3 YFKNA-KFFTTVNHLQDLP-DTPAEIAFVGRSNAGKSSAINTLTQHTRLAYVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 H+NFF K+ +VD+PGYGYA+ P+ W L+ YL RS L + L Sbjct: 61 HINFFELKN---------GGFMVDLPGYGYAQVPEAIRTHWIQLLGGYLQRRSQLIGLIL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AH 185 ++D RH +K +D + F I+L+K DKLS +TL ++ Y Sbjct: 112 IMDARHPLKDLDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLASVNKSLKPYKERQR 171 Query: 186 PEVIPTSSVKRKGIEVLRKAILET 209 V SS+K++GIE + + + E Sbjct: 172 VSVQLFSSLKKQGIEEVNRIVGEW 195 >gi|290969195|ref|ZP_06560720.1| ribosome biogenesis GTP-binding protein YsxC [Megasphaera genomosp. type_1 str. 28L] gi|290780701|gb|EFD93304.1| ribosome biogenesis GTP-binding protein YsxC [Megasphaera genomosp. type_1 str. 28L] Length = 206 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 105/199 (52%), Gaps = 6/199 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ + P G E+AF GRSNVGKSSLIN L N + LAR S +PG+TQ +N++ Sbjct: 11 YVATAVKKSQYPTDGLAEVAFLGRSNVGKSSLINSLCNHRGLARVSGSPGKTQTINYYGV 70 Query: 74 --KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + + VD+PGYG+A+ KK D W I Y+ E + LR + LLID R Sbjct: 71 TLRQEDGEDVRRYPLYFVDLPGYGFAKTGKKQRDMWSAFIHEYIRESTQLRLLCLLIDSR 130 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 H +D + +L VS QIV TK DKL Q+ L + L +P + Sbjct: 131 HPGLDLDLQAYEWLLSAGVSVQIVATKSDKLRARERQQNL---RTLAELFPDGGRP-LLY 186 Query: 192 SSVKRKGIEVLRKAILETI 210 SS+KR+G +L + I+ TI Sbjct: 187 SSLKRQGQTLLLQQIIHTI 205 >gi|320530216|ref|ZP_08031286.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas artemidis F0399] gi|320137649|gb|EFW29561.1| ribosome biogenesis GTP-binding protein YsxC [Selenomonas artemidis F0399] Length = 207 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 5/210 (2%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + TK+ ++L P+ PE+AF GRSNVGKSSLIN L + LAR S+ Sbjct: 1 MQESVVVTKA--VYLSSAVRKDQYPEVRRPEVAFIGRSNVGKSSLINSLTRIRQLARVSS 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ +NF+ + ++ +VD+PGYGYA+A + + W I Y Sbjct: 59 KPGKTQTINFYELLLRIDGGEERHSVHIVDLPGYGYAKAARDSRKIWAKFIEEYFLTSEY 118 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 LR V LL+D RH + D+++FS+L + +V TK DKL + + + + Sbjct: 119 LRFVCLLLDIRHLPMESDRNMFSWLIAHDIPVLVVATKADKLGKNARRTQIAAMRRALGV 178 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++P +S K +G L + + + Sbjct: 179 PELT---ILPYASPKNEGRSELLDVMKDNL 205 >gi|298484198|ref|ZP_07002363.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D22] gi|298269611|gb|EFI11207.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. D22] Length = 201 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ ++ P PE AF GRSNVGKSSLIN+L +RK LA TS+ PG+T +N Sbjct: 5 SAEFVISNTDVKKCPAGIFPEYAFIGRSNVGKSSLINMLTSRKGLAMTSSTPGKTMLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYAR +K + +I Y+ ER + +++LID Sbjct: 65 FLIN---------KNWYLVDLPGYGYARRGQKGKNQIRTIIEDYILEREQMTNLFVLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID + +L + + + I+ TK DKL + + + P Sbjct: 116 RLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKMNINAYLRELGKQWEELPPHFV 175 Query: 191 TSSVKRKGIEVLRKAILETIN 211 +SS R G + I E IN Sbjct: 176 SSSEDRTGRMDILNYI-ENIN 195 >gi|193211890|ref|YP_001997843.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobaculum parvum NCIB 8327] gi|238692673|sp|B3QQY9|ENGB_CHLP8 RecName: Full=Probable GTP-binding protein EngB gi|193085367|gb|ACF10643.1| small GTP-binding protein [Chlorobaculum parvum NCIB 8327] Length = 192 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 101/193 (52%), Gaps = 13/193 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + LP G PEI F GRSNVGKSSL+N L RK LA+TS+ PG+T+ +N+F+ Sbjct: 8 FFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLINYFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + VD+PGYGYA+ +SWG L+ Y+ +R + V LL+D RH Sbjct: 68 NE---------NLYFVDLPGYGYAKVGHGERESWGKLLTDYVVKRDEIALVVLLVDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D+++ FLD + IVLTK DKL + + I + + ++ SS Sbjct: 119 GMGSDREMMEFLDYCGRPFGIVLTKWDKLKQAEKSKA----RRTIESCASNARFIVNYSS 174 Query: 194 VKRKGIEVLRKAI 206 + G + L + + Sbjct: 175 LSGAGRDKLLERL 187 >gi|237734815|ref|ZP_04565296.1| GTPase engB [Mollicutes bacterium D7] gi|229382143|gb|EEO32234.1| GTPase engB [Coprobacillus sp. D7] Length = 199 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 11/202 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ P+ PE+ +GRSNVGKSS IN ++N LA+ S PG+T+ LN Sbjct: 5 KKAEYVLSAAWKSQWPEESFPEMCLAGRSNVGKSSFINAMLNHNGLAKVSGTPGKTRTLN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D A+ VD+PGYGYA+ +G + Y++ RSTLR LL+D Sbjct: 65 FFNVND---------ALYFVDVPGYGYAKVNDSITKQFGKTMDEYITLRSTLRGFILLVD 115 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D ++ F+ V +V TK DKL ++ + K + +P + + Sbjct: 116 YRHKPTKDDVLMYEFVKHHDVPVMVVATKEDKLKRNDLKKNEKIIKDTLGFHPE--DKFV 173 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 SS+++KGIE I E + Sbjct: 174 RFSSLRKKGIEEAWNFIYELCD 195 >gi|227889796|ref|ZP_04007601.1| GTPase [Lactobacillus johnsonii ATCC 33200] gi|227849660|gb|EEJ59746.1| GTPase [Lactobacillus johnsonii ATCC 33200] Length = 194 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ PK PE A +GRSNVGKSSLIN +VNR+ LARTS PG+TQ LNF+ Sbjct: 8 FVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYKV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ KK ++G +I YL R+ L+ + LL+D RH Sbjct: 68 NN---------ELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHN 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++F++ + +V TK+DKL A + +K + + + +P SS Sbjct: 119 PTADDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL-DLSQENVSFLPFSS 177 Query: 194 VKRKGIEVLRKAILETI 210 V + ++ + + + Sbjct: 178 VSKLNVDKFWDWVEDRM 194 >gi|294788035|ref|ZP_06753279.1| ribosome biogenesis GTP-binding protein YsxC [Simonsiella muelleri ATCC 29453] gi|294484328|gb|EFG32011.1| ribosome biogenesis GTP-binding protein YsxC [Simonsiella muelleri ATCC 29453] Length = 210 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 97/197 (49%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+NFF Sbjct: 9 FFTTVNHLKDLP-DTPAEIAFVGRSNAGKSSAINTLCNHVRLAYVSKTPGRTQHINFFEL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA+ P+ W L+ YL R L + L++D RH Sbjct: 68 TNGH---------FMVDLPGYGYAQVPEAIRTHWVKLLGDYLQTRRQLIGLVLIMDARHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTS 192 +K +D + F I+L+K DKLS +TL ++ + V S Sbjct: 119 LKPLDIQMLDFFALTEKPVHILLSKADKLSKNEQIKTLASVHKQLKPFTERQAISVQLFS 178 Query: 193 SVKRKGIEVLRKAILET 209 S+K++GI+ + + + Sbjct: 179 SLKKQGIDEVEETVSAW 195 >gi|189501178|ref|YP_001960648.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium phaeobacteroides BS1] gi|238692282|sp|B3EP28|ENGB_CHLPB RecName: Full=Probable GTP-binding protein EngB gi|189496619|gb|ACE05167.1| GTP-binding protein HSR1-related [Chlorobium phaeobacteroides BS1] Length = 192 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 103/197 (52%), Gaps = 13/197 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F + V I LPK PEI F GRSNVGKS+L+N L RK LA+TS+ PG+TQ +N+ Sbjct: 5 NATFYKSVSAIDHLPKEQLPEIVFVGRSNVGKSTLLNSLTARKGLAKTSSTPGKTQLINY 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 FV + + VD+PGYGYA+ K WG L+ Y+S R ++ V LLID Sbjct: 65 FVINE---------SCYFVDLPGYGYAKVDKGKKYEWGKLLSHYVSTRDSITLVVLLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D + FL+ Y +VLTK DKL + +++Y ++ Sbjct: 116 RHPDMESDHLMAEFLEHCGRPYGVVLTKYDKLKQQAKAAA----RLAVKSYSLKSKFIVN 171 Query: 191 TSSVKRKGIEVLRKAIL 207 S++ +G E L + + Sbjct: 172 YSAISGQGKEELLEQLA 188 >gi|109896346|ref|YP_659601.1| GTP-binding protein, HSR1-related [Pseudoalteromonas atlantica T6c] gi|119369232|sp|Q160A3|ENGB_PSEA6 RecName: Full=Probable GTP-binding protein EngB gi|109698627|gb|ABG38547.1| cell division checkpoint GTPase YihA [Pseudoalteromonas atlantica T6c] Length = 206 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 10/203 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F P+I L E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N Sbjct: 5 SQAKFNLSAPDISHLSADQGIEVAFAGRSNAGKSSALNRLTRQKSLARTSKTPGRTQLIN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + L+D+PGYGYA+ P W + YL +R +L+ + +L+D Sbjct: 65 VFDLDEDR---------RLIDLPGYGYAKVPMAIKLKWQKSLGEYLQKRESLKGLVVLMD 115 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH K +DQ++ + + +LTK DKL + L + + + Sbjct: 116 IRHPFKDLDQELIQWAVAADLPVLGLLTKADKLKSGKRKAQLLMAREASLAF-CGDVTIH 174 Query: 190 PTSSVKRKGIEVLRKAILETINY 212 SS+ G++ + + + Y Sbjct: 175 LFSSLNGLGLDNCERVLDKWFGY 197 >gi|255067338|ref|ZP_05319193.1| ribosome biogeneis GTP-binding protein YsxC [Neisseria sicca ATCC 29256] gi|255048489|gb|EET43953.1| ribosome biogeneis GTP-binding protein YsxC [Neisseria sicca ATCC 29256] Length = 217 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 75/198 (37%), Positives = 102/198 (51%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V + LP P EIAF GRSN GKSS IN L N LA S PGRTQH+N Sbjct: 5 QNAKFFTTVNHLKDLP-DTPAEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + S +VD+PGYGYA+ P+ W L+ YL +R L + L++D Sbjct: 64 FFELSNGS---------FMVDLPGYGYAQVPEAIRTHWVKLLGDYLQQRRQLIGLVLIMD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEV 188 RH +K++D + F I+L+K DKLS +TL K ++ Y T V Sbjct: 115 ARHPLKELDLRMLDFFHITGRPVHILLSKADKLSKNEQIKTLGSVKKSLKPYMTRQRISV 174 Query: 189 IPTSSVKRKGIEVLRKAI 206 SS+K++GIE + + + Sbjct: 175 QLFSSLKKQGIEEVNQVV 192 >gi|254494964|ref|ZP_01052919.2| GTPase of unknown function [Polaribacter sp. MED152] gi|213690546|gb|EAQ42347.2| GTPase of unknown function [Polaribacter sp. MED152] Length = 194 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 95/191 (49%), Gaps = 9/191 (4%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + PK PE AF GRSNVGKSSLIN+L+ RK+LA+ S PG+TQ +N F D Sbjct: 1 MSNSNVINAPKDRIPEYAFIGRSNVGKSSLINMLMERKDLAKISGKPGKTQLINHFKIND 60 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA+ KK + I Y ER L C ++LID RH + Sbjct: 61 ---------NWFLVDLPGYGYAQVSKKKRVIFQYFIENYFKEREQLVCTFVLIDSRHDPQ 111 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +ID D FL + + + +V TK DKL + + + K + + P TSS Sbjct: 112 KIDLDFMRFLGENQIPFCLVFTKADKLGSSKLNKQITSYKKKLLQHWETLPMTFLTSSST 171 Query: 196 RKGIEVLRKAI 206 G + I Sbjct: 172 GLGRKEFLDFI 182 >gi|115451735|ref|NP_001049468.1| Os03g0232500 [Oryza sativa Japonica Group] gi|108707011|gb|ABF94806.1| GTP-binding protein, putative, expressed [Oryza sativa Japonica Group] gi|113547939|dbj|BAF11382.1| Os03g0232500 [Oryza sativa Japonica Group] gi|215766877|dbj|BAG99105.1| unnamed protein product [Oryza sativa Japonica Group] Length = 318 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 95/206 (46%), Gaps = 12/206 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++ PK PE A GRSNVGKSSLIN L+ RK A TS PG+TQ +N Sbjct: 113 KEAEFVKSSARARDCPKDDRPEFAVLGRSNVGKSSLINALIRRKEAALTSKKPGKTQTIN 172 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A A + W Y R TL V LL+D Sbjct: 173 HFLVN---------KSWYLVDLPGYGFAAASQSARTDWSSFTKGYFLNRDTLVGVLLLVD 223 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT---AQETLEKTKYLIRNYPTAHP 186 ++ID D ++L + + V TK DK +E +++ + I + P Sbjct: 224 ASIPPQKIDIDCANWLGRNNIGLTYVFTKCDKSKKGKGGRPEENIKEFQETISSLYPEPP 283 Query: 187 EVIPTSSVKRKGIEVLRKAILETINY 212 I TSSV G + L + + NY Sbjct: 284 PWIMTSSVTGLGRDGLLLHMSQLRNY 309 >gi|322517185|ref|ZP_08070068.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus vestibularis ATCC 49124] gi|322124244|gb|EFX95760.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus vestibularis ATCC 49124] Length = 168 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 85/176 (48%), Gaps = 9/176 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + L P+ PE+A +GRSNVGKSS IN L+ RKNLARTS Sbjct: 1 MAEEQVLNTHNAEILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSG 60 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ LNF+ D + VD+PGYGYAR KK WG +I YL R Sbjct: 61 KPGKTQLLNFYNIDD---------KLRFVDVPGYGYARVSKKERAKWGKMIEEYLVTRDN 111 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 LR V L+D RH Q D ++ FL + +V TK DK+ + K Sbjct: 112 LRVVVSLVDLRHEPTQDDIQMYEFLKYYEIPVIVVATKADKIPRGKWNKHESIIKK 167 >gi|224089064|ref|XP_002308620.1| predicted protein [Populus trichocarpa] gi|222854596|gb|EEE92143.1| predicted protein [Populus trichocarpa] Length = 311 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 77/215 (35%), Positives = 106/215 (49%), Gaps = 18/215 (8%) Query: 7 FTKSAWI----FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 + ++A + F++ P G PE A GRSNVGKSSL+N LV RK LA TS P Sbjct: 102 YARNAQVVQAEFIKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKP 161 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 G+TQ +N F D + LVD+PGYGYA AP++ W Y RSTL Sbjct: 162 GKTQCINHFKVND---------SWYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLV 212 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYL 177 V+LLID K+ID + S+L + V + TK DK +E + + + L Sbjct: 213 SVFLLIDASIPAKKIDLEYASWLGQNQVPMTFIFTKCDKRKKKRNGGKRPEENVNEFQEL 272 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 IR + P I TS V +G + + + + NY Sbjct: 273 IRGFFETAPPWIMTSGVTNQGRDEMLLHMAQLRNY 307 >gi|42518938|ref|NP_964868.1| GTPase EngB [Lactobacillus johnsonii NCC 533] gi|38606910|gb|AAR25449.1| GTP binding protein [Lactobacillus johnsonii] gi|41583225|gb|AAS08834.1| probable GTP-binding protein EngB [Lactobacillus johnsonii NCC 533] gi|329667518|gb|AEB93466.1| putative GTP-binding protein [Lactobacillus johnsonii DPC 6026] Length = 194 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ PK PE A +GRSNVGKSSLIN +VNR+ LARTS PG+TQ LNF+ Sbjct: 8 FVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYKV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ KK ++G +I YL R+ L+ + LL+D RH Sbjct: 68 NN---------ELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHN 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++F++ + +V TK+DKL A + +K + + + +P SS Sbjct: 119 PTADDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKIGKSL-DLSQENVSFLPFSS 177 Query: 194 VKRKGIEVLRKAILETI 210 V + ++ + + + Sbjct: 178 VSKLNVDKFWDWVEDKM 194 >gi|268319666|ref|YP_003293322.1| Probable GTP-binding protein EngB [Lactobacillus johnsonii FI9785] gi|262398041|emb|CAX67055.1| Probable GTP-binding protein EngB [Lactobacillus johnsonii FI9785] Length = 194 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 105/197 (53%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ PK PE A +GRSNVGKSSLIN +VNR+ LARTS PG+TQ LNF+ Sbjct: 8 FVISAVSEKQYPKDDLPEFALAGRSNVGKSSLINTIVNRRKLARTSQQPGKTQTLNFYKV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ KK ++G +I YL R+ L+ + LL+D RH Sbjct: 68 NN---------ELYLVDVPGYGYAKVSKKQRAAFGEMIQDYLETRADLKGLILLVDARHN 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++F++ + +V TK+DKL A + +K + + + +P SS Sbjct: 119 PTADDINMFNYALYLDIPILVVATKMDKLKKMEASQIKQKISKSL-DLSQENVSFLPFSS 177 Query: 194 VKRKGIEVLRKAILETI 210 V + ++ + + + Sbjct: 178 VSKLNVDKFWDWVEDKM 194 >gi|153005532|ref|YP_001379857.1| ribosome biogenesis GTP-binding protein YsxC [Anaeromyxobacter sp. Fw109-5] gi|166225939|sp|A7HDS7|ENGB_ANADF RecName: Full=Probable GTP-binding protein EngB gi|152029105|gb|ABS26873.1| GTP-binding protein HSR1-related [Anaeromyxobacter sp. Fw109-5] Length = 216 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 94/194 (48%), Gaps = 3/194 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P+ PE+AF GRSNVGKSS++N L +K LAR S PGRT+ L FF Sbjct: 10 FVKTATRPPEWPRGQTPELAFVGRSNVGKSSMLNALTRKKGLARVSATPGRTRALQFFDV 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + D+PGYGYA+ ++ D W +I YL +R LR V L++D RH Sbjct: 70 AYRPTPAARPRHVRFCDLPGYGYAKVSREERDRWAAMIEDYLRDRDVLRAVVLIVDARHA 129 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D D +FL + TK+DKL T L + + A E +P S+ Sbjct: 130 PSDSDVDAAAFLRATGRRVLVAATKMDKLPKTRRGAALRAVEGALA---LAKGEAVPFSA 186 Query: 194 VKRKGIEVLRKAIL 207 V+ G + L I Sbjct: 187 VEGTGTDALWARIA 200 >gi|319791903|ref|YP_004153543.1| ribosome biogenesis GTP-binding protein ysxc [Variovorax paradoxus EPS] gi|315594366|gb|ADU35432.1| ribosome biogenesis GTP-binding protein YsxC [Variovorax paradoxus EPS] Length = 261 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 13/205 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P++ LP PEIAF GRSN GKS+ IN L + LA S PGRTQH+N Sbjct: 44 HTAHFLTSAPQLEHLPPVDLPEIAFVGRSNAGKSTAINTLTQQTRLAFASKTPGRTQHIN 103 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K + L D+PGYGYA PK+ W ++ YL R +LR V L+ D Sbjct: 104 LFGIG-----KQKVDDAVLADLPGYGYAAVPKEAKLRWQRVMGNYLITRESLRGVVLMCD 158 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RHG+ ++D+ + + ++ + + I+LTK DKL+ + A + L T+ Sbjct: 159 PRHGLTELDEILLDVIRPRVQQGLKFLILLTKSDKLTRSEAAKVLSITR-----LQAGGG 213 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 EV S++K++G+ + + + ++ Sbjct: 214 EVKLFSALKKQGVGDAAQLLWQWVH 238 >gi|284125883|ref|ZP_06386995.1| GTP-binding protein engB [Candidatus Poribacteria sp. WGA-A3] gi|283829177|gb|EFC33603.1| GTP-binding protein engB [Candidatus Poribacteria sp. WGA-A3] Length = 209 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 74/193 (38%), Positives = 105/193 (54%), Gaps = 6/193 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PE+AF GRSNVGKSS IN L+NRK++A+ S PG+TQ LNFF Sbjct: 12 FVKSCMKPAHYPHERLPEVAFVGRSNVGKSSAINSLLNRKSIAKVSTTPGKTQTLNFFRV 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +PA+ VD+PGYGYA+A K + WG +I RYLS+R+ L V L+D R G Sbjct: 72 LTSDKV---VPAIFFVDLPGYGYAKAAKSVREQWGPMIERYLSQRAQLCAVVQLVDAR-G 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D +L +V+TKIDKLS + L + + EV+ SS Sbjct: 128 LEAHDVTTLEWLTHLGHRPIVVVTKIDKLSRGRRRPALVQVCQTLG--VENDEEVMGYSS 185 Query: 194 VKRKGIEVLRKAI 206 +G + L + Sbjct: 186 KTNEGRQELWNEL 198 >gi|51891500|ref|YP_074191.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] gi|81610694|sp|Q67SJ6|ENGB_SYMTH RecName: Full=Probable GTP-binding protein EngB gi|51855189|dbj|BAD39347.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 233 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 94/221 (42%), Gaps = 25/221 (11%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G P+ G PE+A GRSNVGKSSLIN LV + LARTSN PGRTQ LNF+ Sbjct: 7 FVLSAVAQGQFPQDGLPEVALVGRSNVGKSSLINALVRNRKLARTSNTPGRTQALNFYRV 66 Query: 74 KDFSNLK------------------------NNLPAMALVDMPGYGYARAPKKNVDSWGG 109 + A LVDMPGYG+AR + W Sbjct: 67 WPQGKPRPEGEPQPDKDAGRTALSGPVLQAARESGAFYLVDMPGYGFARVSEAQRREWAR 126 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 LI YL R LR V ++D RH + D + ++ + V TK DK+ T Sbjct: 127 LIEGYLLTRGALRGVLQIVDLRHPPTRDDVTMREWIRHHRLPSLCVATKADKIGRTAWPR 186 Query: 170 TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + ++ S+ G + + + I E + Sbjct: 187 HRQVIARELG-LDGDGEPLVLFSAETGLGRDDVWRWIREHV 226 >gi|119503604|ref|ZP_01625687.1| GTP-binding protein EngB [marine gamma proteobacterium HTCC2080] gi|119460666|gb|EAW41758.1| GTP-binding protein EngB [marine gamma proteobacterium HTCC2080] Length = 221 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 98/197 (49%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ +G P E+AF+GRSN GKSS IN L + + LARTS PGRTQ +NFF Sbjct: 21 FMQSASSLGNAPSDTGSEVAFAGRSNAGKSSAINTLTSNRKLARTSRTPGRTQLINFFSL 80 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ P K W + YL R +LR + LL+D RH Sbjct: 81 SDSQ---------RLVDLPGYGYAKVPLKMKQEWNRHMADYLQRRESLRGLILLMDIRHP 131 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + + K + +LTK DKL A+ TL + + + SS Sbjct: 132 LTDADEQMIGWASKAQMPIHALLTKADKLKRGPAKATLLSVQARLLEF-GDLASAQLFSS 190 Query: 194 VKRKGIEVLRKAILETI 210 +K G+ LR + + Sbjct: 191 LKEDGLPALRTKLKTWL 207 >gi|331005490|ref|ZP_08328868.1| GTP-binding protein EngB [gamma proteobacterium IMCC1989] gi|330420682|gb|EGG94970.1| GTP-binding protein EngB [gamma proteobacterium IMCC1989] Length = 208 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 69/201 (34%), Positives = 101/201 (50%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +FL+ ++ P A E+AF+GRSN GKSS IN L + K LARTS PGRTQ +N Sbjct: 8 HNAVFLQSASKLSQCPTAITAEVAFAGRSNAGKSSAINTLTDNKKLARTSKTPGRTQLIN 67 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F + LVD+PGYGYA+ P W + YL R L+ + LL+D Sbjct: 68 YFSINAEKS---------LVDLPGYGYAKVPISMKREWDKNLTEYLQSRDVLKGLVLLMD 118 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEV 188 RH +++ D + + + +I+LTK DKL A+ TL + +R V Sbjct: 119 IRHPMQEFDTMMLNQAIDNEMPVRILLTKCDKLKKGPAKSTLLAVEKHLRESEVDDLVSV 178 Query: 189 IPTSSVKRKGIEVLRKAILET 209 SS+K +G++ L + Sbjct: 179 QLFSSLKNEGVKELVSVLDSW 199 >gi|116490352|ref|YP_809896.1| GTPase [Oenococcus oeni PSU-1] gi|290889749|ref|ZP_06552837.1| hypothetical protein AWRIB429_0227 [Oenococcus oeni AWRIB429] gi|122277459|sp|Q04H41|ENGB_OENOB RecName: Full=Probable GTP-binding protein EngB gi|116091077|gb|ABJ56231.1| Predicted GTPase [Oenococcus oeni PSU-1] gi|290480573|gb|EFD89209.1| hypothetical protein AWRIB429_0227 [Oenococcus oeni AWRIB429] Length = 198 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 10/196 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + P EIAF GRSNVGKSSLIN L+ R LA TS PG+TQ LNF Sbjct: 5 NPKLIISAVSKKQYPAGNLSEIAFVGRSNVGKSSLINTLIERNGLAHTSGQPGKTQTLNF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + + + VD+PGYGYA+ K + +G ++ YLS R L+ V LID Sbjct: 65 YNLDE---------KLFFVDVPGYGYAKVSKAQREQFGSMVEEYLSSRDQLKGVISLIDA 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH + D+ ++++L+ V IV TK DK++ + K ++ + + +I Sbjct: 116 RHEPTEDDKLMYNWLEYYQVPILIVATKADKVASGKFNAVESQIKKTLK-FNSTTSSLIL 174 Query: 191 TSSVKRKGIEVLRKAI 206 S++K+ G + + I Sbjct: 175 FSAIKKFGAKEIWNWI 190 >gi|78186100|ref|YP_374143.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium luteolum DSM 273] gi|119369228|sp|Q3B6D1|ENGB_PELLD RecName: Full=Probable GTP-binding protein EngB gi|78166002|gb|ABB23100.1| GTP-binding protein [Chlorobium luteolum DSM 273] Length = 207 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 101/192 (52%), Gaps = 13/192 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R V + LP PEI F+GRSNVGKSSL+N L RK LA+TS+ PG+T+ LN+F+ Sbjct: 8 FIRSVSALQDLPDERVPEIVFAGRSNVGKSSLLNSLTGRKGLAKTSSTPGKTRLLNYFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYGYA D+WG L+ Y+ R + V LL+D RH Sbjct: 68 ND---------DLYFVDIPGYGYAAVSHTEKDAWGRLLAGYVGGRQAIALVVLLLDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+++ FL Y IVLTK DKL+ + K + + ++ SS Sbjct: 119 AMESDREMMEFLAYHDRPYGIVLTKDDKLTQKERAKA----KRVTASCALNAEFIVSYSS 174 Query: 194 VKRKGIEVLRKA 205 + KG + L Sbjct: 175 ISGKGKKELLAH 186 >gi|319778689|ref|YP_004129602.1| GTP-binding protein EngB [Taylorella equigenitalis MCE9] gi|317108713|gb|ADU91459.1| GTP-binding protein EngB [Taylorella equigenitalis MCE9] Length = 203 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 103/202 (50%), Gaps = 4/202 (1%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F ++ LP+ PE+ F GRSNVGKSS IN+L N++ LA S PGRT+ +N Sbjct: 5 HRAKFFVSASQLNQLPEPSVPEVCFVGRSNVGKSSAINVLANQRRLAYASKTPGRTRLIN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + + A LVD+PGYGYA + + W ++ YL RS+L V LLID Sbjct: 65 LFGIPSKDDP--DQAAAFLVDLPGYGYASVAQNTKEEWAEVLGSYLRTRSSLAAVVLLID 122 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R G+ +D+ + ++ + ++LTK DKL + I+ +VI Sbjct: 123 IRRGLTTLDKLLIDWIAPYEIPLIVLLTKADKLPYGQRKTATFGINKSIKQIKDL--KVI 180 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 P SS +R GIE KAIL + Sbjct: 181 PFSSTERIGIEETEKAILHYLG 202 >gi|145219093|ref|YP_001129802.1| GTPase EngB [Prosthecochloris vibrioformis DSM 265] gi|189037185|sp|A4SCU1|ENGB_PROVI RecName: Full=Probable GTP-binding protein EngB gi|145205257|gb|ABP36300.1| GTP-binding protein, HSR1-related protein [Chlorobium phaeovibrioides DSM 265] Length = 191 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 74/192 (38%), Positives = 103/192 (53%), Gaps = 13/192 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R V ++ LP+ PEI F+GRSNVGKSSL+N L RK LA+TS+ PG+T+ +N+F+ Sbjct: 8 FVRSVSDLSDLPEESFPEIVFAGRSNVGKSSLLNSLTGRKGLAKTSSTPGKTRLINYFLL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYGYA D+WG L+ Y+ +R+ + V LL+D RH Sbjct: 68 ND---------NLYFVDIPGYGYAAVSHAEKDAWGRLLAGYVGDRAAIALVVLLLDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+D+ FL Y IVLTK DKL+ T+ N ++ SS Sbjct: 119 AMKSDRDMMDFLAYHDRPYGIVLTKDDKLTQKERTHAKRATESCAMN----AGFIVSYSS 174 Query: 194 VKRKGIEVLRKA 205 V KG L Sbjct: 175 VSGKGKNELLDH 186 >gi|91786673|ref|YP_547625.1| ribosome biogenesis GTP-binding protein YsxC [Polaromonas sp. JS666] gi|119369230|sp|Q12FG5|ENGB_POLSJ RecName: Full=Probable GTP-binding protein EngB gi|91695898|gb|ABE42727.1| GTP-binding protein, HSR1-related protein [Polaromonas sp. JS666] Length = 245 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL PE+ LP+ PEIAF GRSN GKS+ IN L + LA S PGRTQ +N Sbjct: 28 HTAKFLTTAPELKHLPRLDVPEIAFVGRSNAGKSTCINTLTQQHRLAFASKTPGRTQSIN 87 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K + L D+PGYGYA PK+ W ++ YL R L+ V LL D Sbjct: 88 LFSLG-----KQGVTDAVLADLPGYGYAAVPKEAKYRWQQVMGNYLQTRDNLKAVVLLCD 142 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + L ++ + + ++LTK DKL+ T A + L + Sbjct: 143 PRLGLTELDEILLDVLRPRVEEGLKFLVLLTKSDKLNKTEAAKALSIVR-----LQAGGG 197 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 +V SS+KRKG+E + + + + Sbjct: 198 DVKLFSSLKRKGVEEVAQHLWDW 220 >gi|330004746|ref|ZP_08305015.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. MS 92-3] gi|328536532|gb|EGF62869.1| ribosome biogenesis GTP-binding protein YsxC [Klebsiella sp. MS 92-3] Length = 175 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 9/168 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+KNLARTS PGRTQ +N F Sbjct: 11 FVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKNLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ P++ W + YL +R L+ + +L+D RH Sbjct: 71 AEGK---------RLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 +K +DQ + + + + ++LTK DKL+ + + + + + Sbjct: 122 LKDLDQQMIEWAVESDIQVLVLLTKADKLASGARKAQVNMVREAVLAF 169 >gi|118586682|ref|ZP_01544120.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118432867|gb|EAV39595.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 198 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 66/192 (34%), Positives = 99/192 (51%), Gaps = 10/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P EIAF GRSNVGKSSLIN L+ R LA TS PG+TQ LNF+ Sbjct: 9 IISAVSKKQYPAGNLSEIAFVGRSNVGKSSLINTLIERNGLAHTSGQPGKTQTLNFYNLD 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G ++ YLS R L+ V LID RH Sbjct: 69 E---------KLFFVDVPGYGYAKVSKAQREQFGSMVEEYLSSRDQLKGVISLIDARHEP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ ++++L+ V IV TK DK++ + K ++ + + +I S++ Sbjct: 120 TEDDKLMYNWLEYYQVPILIVATKADKVASGKFNAVESQIKKTLK-FNSTTSSLILFSAI 178 Query: 195 KRKGIEVLRKAI 206 K+ G + + I Sbjct: 179 KKFGAKEIWNWI 190 >gi|302039585|ref|YP_003799907.1| GTP-binding protein EngB [Candidatus Nitrospira defluvii] gi|300607649|emb|CBK43982.1| GTP-binding protein EngB [Candidatus Nitrospira defluvii] Length = 200 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 98/196 (50%), Gaps = 6/196 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F++ P PEIAF GRSNVGKSSLIN L++RK LA+ S PG+T+ +NF Sbjct: 5 SAEFIKSSVSPEQFPPDRLPEIAFVGRSNVGKSSLINSLLHRKKLAKVSKTPGKTRAVNF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + L ++LVD+PGYGYA+ K WG +I +YL +R +L V LLI+ Sbjct: 65 FTVRTSDP---KLSLLSLVDLPGYGYAKVSKTMRAQWGPMIEQYLEQRQSLGAVILLIEA 121 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R D ++ IVLTK DKL + +L + P ++ Sbjct: 122 RV-WMPQDVMTVQWVQSLGCGMIIVLTKADKLRQSERAPSLAAVRTACGLGPE--VPIVL 178 Query: 191 TSSVKRKGIEVLRKAI 206 S+ +G + L I Sbjct: 179 YSAETHEGRDALWGEI 194 >gi|258511808|ref|YP_003185242.1| ribosome biogenesis GTP-binding protein YsxC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478534|gb|ACV58853.1| ribosome biogenesis GTP-binding protein YsxC [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 220 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 13/186 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 PK PE AF GRSNVGKS+L+N L+NRK LAR S+ PG+T+ +NF++ Sbjct: 16 DQWPKTMLPEFAFLGRSNVGKSTLLNRLLNRKQLARVSSQPGKTRQINFYLINQ------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD+PGYGYA K+ + +I RYL++R LR ++ LID RH + D V Sbjct: 70 ---SFRFVDLPGYGYAAVSKQERQRFAAMIDRYLNDRECLRRIFHLIDIRHEPTKDDVAV 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + L + V +V TK DK+ + + ++ + +R ++ P S+ KR G+E Sbjct: 127 HAALLELGVPVSVVATKADKIGRSHVPKHVKVIRDTLR----TPVDIWPVSAEKRTGLEA 182 Query: 202 LRKAIL 207 L + Sbjct: 183 LWAVME 188 >gi|114330261|ref|YP_746483.1| GTPase EngB [Nitrosomonas eutropha C91] gi|122314688|sp|Q0AJF3|ENGB_NITEC RecName: Full=Probable GTP-binding protein EngB gi|114307275|gb|ABI58518.1| cell division checkpoint GTPase YihA [Nitrosomonas eutropha C91] Length = 223 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 107/211 (50%), Gaps = 14/211 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + H +F + F V I LP+A EIAF+GRSN GKSS IN LV R A TS Sbjct: 1 MVHPLFRHAE--FYTTVNHIKDLPQATGVEIAFAGRSNAGKSSAINTLVGRGRFAFTSKT 58 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQH+NFF + +VD+PGYGYA+ P W L+ YL R L Sbjct: 59 PGRTQHINFFQLGEER---------FMVDLPGYGYAQVPLAIRQHWVHLLSTYLQTRQAL 109 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RN 180 + L++D RH + ++D + + + ++LTK DKLS + A L++ + + + Sbjct: 110 YGMILIMDIRHPLTKLDLQMLEWFAQTGKLVHVLLTKADKLSRSKALAVLDEIRQFLSTS 169 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 Y ++ SS+ +G E + + + + Sbjct: 170 YSGCTVQI--FSSLTSEGAEEASRLLQDWFD 198 >gi|330721713|gb|EGG99711.1| GTP-binding protein EngB [gamma proteobacterium IMCC2047] Length = 207 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 102/199 (51%), Gaps = 10/199 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ E+AF+GRSN GKSS IN + LA+TS PGRTQ +NFF Sbjct: 15 TFITSAAKLSQCLSDDGLEVAFAGRSNAGKSSAINAIAQHGKLAKTSKTPGRTQLINFFS 74 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +VD+PGYGYA+ P W I YL ERS+L+ ++L++D RH Sbjct: 75 T--------VSEQQRIVDLPGYGYAKVPLAVKRQWENFIDAYLRERSSLQGLFLIMDIRH 126 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + S+ + + I+LTK DKL A+ TL K + +++ H V S Sbjct: 127 PLTDFDSMILSWSKQSQLRVHILLTKADKLKFGAAKSTLLKVQRDLKDLD--HVSVQLFS 184 Query: 193 SVKRKGIEVLRKAILETIN 211 + ++ G++ R + E ++ Sbjct: 185 ATQKMGLDEARDKLSEWLD 203 >gi|295099543|emb|CBK88632.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Eubacterium cylindroides T2-87] Length = 189 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 100/194 (51%), Gaps = 12/194 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ + P+ PE+ GRSNVGKSS IN L NRK LA + PG+T+ LNFF Sbjct: 4 QFVTSATQKSEWPETTLPEVVVVGRSNVGKSSFINALTNRKKLAYVGSTPGKTRLLNFFD 63 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 LVD+PGYGYA+ K +++ G ++ Y +ER ++CV LID RH Sbjct: 64 IDQ---------TWILVDVPGYGYAKMSKSSLEKLGHMMDEYFNEREQIKCVVQLIDARH 114 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D+++ F + ++ IV TKIDK+ T + ++ K + + +V S Sbjct: 115 DPTKDDKEMIDFFKEVSIPIVIVATKIDKVPKT---KRIKALKNISQCLQIPLKQVHGVS 171 Query: 193 SVKRKGIEVLRKAI 206 S ++ G E + I Sbjct: 172 STEKIGFEEVLDTI 185 >gi|224476764|ref|YP_002634370.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus carnosus subsp. carnosus TM300] gi|254783209|sp|B9DNB9|ENGB_STACT RecName: Full=Probable GTP-binding protein EngB gi|222421371|emb|CAL28185.1| putative GTP-binding protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 195 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L + P+ G E+A +GRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 11 LISAVKPEQYPETGLEEVALAGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D M VD+PGYGYA+ KK + +G +I +Y+++R L+ V LID RH Sbjct: 71 D---------QMIFVDVPGYGYAKVSKKQREQFGKMIEKYITQREQLKVVVQLIDIRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL + I+ TK DK++ Q+ L+ K + +I SSV Sbjct: 122 TEDDVLMYDFLKYYDLPVLIIATKEDKIAKGKVQKHLKNIKDKLE--LEEEDTIISYSSV 179 Query: 195 KRKGIEVLRKAILETI 210 K +V+ AI + Sbjct: 180 TNKNQQVIWDAIERYL 195 >gi|139438420|ref|ZP_01771936.1| Hypothetical protein COLAER_00926 [Collinsella aerofaciens ATCC 25986] gi|133775959|gb|EBA39779.1| Hypothetical protein COLAER_00926 [Collinsella aerofaciens ATCC 25986] Length = 196 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 102/197 (51%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ +P++ PE++F GRSNVGKSS++N L RKNL + S+ PG+T ++NFF Sbjct: 12 FVASYGKVSQIPESTCPEVSFVGRSNVGKSSIMNKLFGRKNLVKVSSTPGKTSNINFFEA 71 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYG+AR K D W LI + + V L+D RH Sbjct: 72 DD----------VHFVDLPGYGFARRSKAERDRWAELIGDFFDSERSFNLVVSLVDIRHD 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++D D+ +L ++ + LTK DKLS T K + N P VI TSS Sbjct: 122 PSKLDHDMIDYLQGNEFNFIVCLTKADKLSRTQQARQAAAIKKQL-NVPAE--NVIITSS 178 Query: 194 VKRKGIEVLRKAILETI 210 GI+ L+K I E Sbjct: 179 QTGTGIDELKKRIAEAC 195 >gi|261366927|ref|ZP_05979810.1| ribosome biogenesis GTP-binding protein YsxC [Subdoligranulum variabile DSM 15176] gi|282571043|gb|EFB76578.1| ribosome biogenesis GTP-binding protein YsxC [Subdoligranulum variabile DSM 15176] Length = 200 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 93/198 (46%), Gaps = 12/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL LP + PEI FSGRSNVGKSSLIN L NRKNLAR S+ PG+T +NF+ Sbjct: 8 FLASYGLSRQLPDSDRPEIVFSGRSNVGKSSLINKLCNRKNLARVSSTPGKTATINFY-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 VD+PGYGYA+ + W LI Y + + L+DCRH Sbjct: 66 --------KADTAYFVDLPGYGYAKVSNADRARWDELINSYFEADRAVCLLIQLLDCRHA 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + +L + + LTK DKL + + + + Y V TS+ Sbjct: 118 PSADDVQMLEYLHYHGIPFVAALTKADKLKKSQLAACQSEFEEICAPYGCLG--VYLTSA 175 Query: 194 VKRKGIEVLRKAILETIN 211 G++ LR + + ++ Sbjct: 176 ENGYGMDALRACLEDHLH 193 >gi|88801296|ref|ZP_01116824.1| GTP-binding protein [Polaribacter irgensii 23-P] gi|88781954|gb|EAR13131.1| GTP-binding protein [Polaribacter irgensii 23-P] Length = 203 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 95/197 (48%), Gaps = 9/197 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + P PE AF GRSNVGKSSLIN+L+ RK+LA+ S PG+TQ +N Sbjct: 4 KSAEFIMSNSNVMKAPTERMPEYAFIGRSNVGKSSLINMLMERKDLAKISGKPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD+PGYGYA KK + I Y ER L C ++LID Sbjct: 64 HFKINE---------EWFLVDLPGYGYASVSKKKRVIFQYFIENYFKEREQLVCTFVLID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH ++ID D FL + + + I+ TK DKL + + + K + + P Sbjct: 115 SRHDPQKIDLDFMQFLGENQIPFCIIFTKADKLGSSKLNKQITSYKKKLLQHWETLPTSF 174 Query: 190 PTSSVKRKGIEVLRKAI 206 TSS G I Sbjct: 175 LTSSNTSLGRTEFLNFI 191 >gi|221195789|ref|ZP_03568842.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium rimae ATCC 49626] gi|221184263|gb|EEE16657.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium rimae ATCC 49626] Length = 194 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 13/196 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + I LPK PE++F GRSNVGKSSL+N L+ RK LAR S+ PG+T ++NFF Sbjct: 10 YEASYGTIAQLPKPTTPEVSFVGRSNVGKSSLLNRLLGRKQLARVSSVPGKTANINFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + VD+PGYGYA+ W LI Y + + V L+D RH Sbjct: 68 --------DVDGVKFVDLPGYGYAKVSHIEKQRWADLIGGYFEQERSFNLVISLVDIRHE 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +++D + FL + + + + LTK DK++ + + ++ A ++I TSS Sbjct: 120 AQKLDLQMVDFLTEAELPFVVALTKADKITRNKQNQAAAALRS---SFGLAQEQIIITSS 176 Query: 194 VKRKGIEVLRKAILET 209 GI+ LR+ I + Sbjct: 177 ETGLGIDELRRRIEDA 192 >gi|167755847|ref|ZP_02427974.1| hypothetical protein CLORAM_01364 [Clostridium ramosum DSM 1402] gi|167704786|gb|EDS19365.1| hypothetical protein CLORAM_01364 [Clostridium ramosum DSM 1402] Length = 205 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 11/202 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 ++ P+ PE+ +GRSNVGKSS IN ++N LA+ S PG+T+ LN Sbjct: 11 KKAEYVLSAAWKSQWPEESFPEMCLAGRSNVGKSSFINAMLNHNGLAKVSGTPGKTRTLN 70 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF D A+ VD+PGYGYA+ +G + Y++ RSTLR LL+D Sbjct: 71 FFNVND---------ALYFVDVPGYGYAKVNDSITKQFGKTMDEYITLRSTLRGFILLVD 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D ++ F+ V +V TK DKL ++ + K + +P + + Sbjct: 122 YRHKPTKDDVLMYEFVKHHDVPVMVVATKEDKLKRNDLKKNEKIIKDTLGFHPE--DKFV 179 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 SS+++KGIE I E + Sbjct: 180 RFSSLRKKGIEEAWNFIYELCD 201 >gi|229825759|ref|ZP_04451828.1| hypothetical protein GCWU000182_01122 [Abiotrophia defectiva ATCC 49176] gi|229790322|gb|EEP26436.1| hypothetical protein GCWU000182_01122 [Abiotrophia defectiva ATCC 49176] Length = 198 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 68/187 (36%), Positives = 107/187 (57%), Gaps = 11/187 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P+ PE AF+G+SNVGKSSLIN L+NRK LAR S PG+TQ +N++ D Sbjct: 16 SKIPEMPHPEFAFAGKSNVGKSSLINALMNRKALARVSAQPGKTQTINYYNVND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + LVD+PGYGY + + WG ++ +YL + L+ V+LLID RH + D + Sbjct: 70 ---EIYLVDLPGYGYTKVAVEVKAKWGKMVEKYLRQSKMLKYVFLLIDSRHKPSENDIMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + V+ IV TKIDKL + + +E + T+ +++P SS + G++ Sbjct: 127 YEWIVSQGVNPIIVATKIDKLKRSQIKGQMELIIKTLN--LTSKEQLLPFSSETKAGVKE 184 Query: 202 LRKAILE 208 L + I + Sbjct: 185 LWEIIED 191 >gi|160947714|ref|ZP_02094881.1| hypothetical protein PEPMIC_01649 [Parvimonas micra ATCC 33270] gi|158446848|gb|EDP23843.1| hypothetical protein PEPMIC_01649 [Parvimonas micra ATCC 33270] Length = 196 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 104/193 (53%), Gaps = 11/193 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 I P + E+AF+GRSNVGKSS IN +NRKNLARTS+ PG+T+ +NF+ + Sbjct: 12 AAIISQYPDSDLKEVAFAGRSNVGKSSFINAFINRKNLARTSSKPGKTRTVNFYKINN-- 69 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + LVD+PGYGYA+ K + WG +I YLS R L V L++D RH + Sbjct: 70 -------SFRLVDLPGYGYAQVSKSEKEKWGVIIETYLSNRENLCEVILIVDIRHAPSKE 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D ++++L + S ++ TK DK+S + L+ + + VIP SS + Sbjct: 123 DVMMYNWLLEYGFSGYVIATKADKISKGQWNKHLKVVRETLGINDMNL--VIPFSSDSKA 180 Query: 198 GIEVLRKAILETI 210 +E + I E + Sbjct: 181 NLEAVHNKIEEIL 193 >gi|319790441|ref|YP_004152074.1| ribosome biogenesis GTP-binding protein YsxC [Thermovibrio ammonificans HB-1] gi|317114943|gb|ADU97433.1| ribosome biogenesis GTP-binding protein YsxC [Thermovibrio ammonificans HB-1] Length = 194 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 105/195 (53%), Gaps = 12/195 (6%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + V LP+ E+AF GRSNVGKSSL+N + N LA+ S+ PG+T+ +NF++ D Sbjct: 10 KTVYTPDELPQTPYNEVAFVGRSNVGKSSLLNAVANNFKLAKVSSQPGKTRSINFYLVND 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYG+A+ P K W LI YL R L+ V+LL+D + G Sbjct: 70 R---------FFLVDLPGYGFAKVPLKEQQRWRELIESYLKGRDRLKGVFLLVDSKVGPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D + +LD + Y +V TK+D+L + + E+ K + +VIP S+ Sbjct: 121 EKDLQMKEWLDFFGIPYTVVATKVDRLKASQRRNLEERIKKAL---GGGDFKVIPFSAKT 177 Query: 196 RKGIEVLRKAILETI 210 R+G EVL + I I Sbjct: 178 REGREVLLREIFNYI 192 >gi|332304400|ref|YP_004432251.1| ribosome biogenesis GTP-binding protein YsxC [Glaciecola agarilytica 4H-3-7+YE-5] gi|332171729|gb|AEE20983.1| ribosome biogenesis GTP-binding protein YsxC [Glaciecola agarilytica 4H-3-7+YE-5] Length = 206 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 97/203 (47%), Gaps = 10/203 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F P+I L E+AF+GRSN GKSS +N L +K+LARTS PGRTQ +N Sbjct: 5 SQAKFNLSAPDISHLGADKGIEVAFAGRSNAGKSSALNRLTRQKSLARTSKTPGRTQLIN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + LVD+PGYGYA+ P W + YL +R +L+ + +L+D Sbjct: 65 VFDLDEER---------RLVDLPGYGYAKVPMAIKLKWQKSLGEYLQKRESLQGLVVLMD 115 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH K +DQ++ + + +LTK DKL + L + + + Sbjct: 116 IRHPFKDLDQELIQWAVAADLPVLGLLTKADKLKSGKRKAQLLMAREASLAF-CGDVTIH 174 Query: 190 PTSSVKRKGIEVLRKAILETINY 212 SS+ G++ + + + Y Sbjct: 175 LFSSLNGLGLDNCERVLDKWFGY 197 >gi|313113614|ref|ZP_07799202.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium cf. prausnitzii KLE1255] gi|310624129|gb|EFQ07496.1| ribosome biogenesis GTP-binding protein YsxC [Faecalibacterium cf. prausnitzii KLE1255] Length = 199 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 100/200 (50%), Gaps = 12/200 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + F+ LP++ PE++FSGRSNVGKSSLIN L +RKNLAR S+ PG+T Sbjct: 1 MNYNKADFIASYGISSQLPESDRPELSFSGRSNVGKSSLINKLCSRKNLARVSSTPGKTA 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ D VD+PGYGYA+ + + W LI Y + Sbjct: 61 TINFYSVDD----------CYFVDLPGYGYAKVSNADRERWDDLINSYFEAPRHHTLLVQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+DCRH D+ + +L + Y + LTK DKL + +TLE + L R Y Sbjct: 111 LLDCRHAPSADDEQMLRYLHYHQIPYVVALTKADKLKKSQLAKTLEDFENLCRPYGCQ-- 168 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 +V+ TS GI L+ + Sbjct: 169 KVVLTSGENGYGIPELQAVL 188 >gi|193215228|ref|YP_001996427.1| ribosome biogenesis GTP-binding protein YsxC [Chloroherpeton thalassium ATCC 35110] gi|238692681|sp|B3QS35|ENGB_CHLT3 RecName: Full=Probable GTP-binding protein EngB gi|193088705|gb|ACF13980.1| GTP-binding protein HSR1-related [Chloroherpeton thalassium ATCC 35110] Length = 193 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 106/200 (53%), Gaps = 13/200 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F + V + LPK G PEIAF+GRSNVGKSSL+N L+ +K+LAR S PG+T+ +NF Sbjct: 5 SAEFYKSVTRLEDLPKDGLPEIAFAGRSNVGKSSLMNTLMGKKDLARASATPGKTREINF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ VD+PGYG+A+ K ++W L+ YL R+ L+ + LLID Sbjct: 65 FLVN---------GKYYFVDLPGYGFAKVSKSLQENWQQLMEGYLKSRAELKLIVLLIDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH ID ++ FL + IV TK DKL+ + L K+K ++ Sbjct: 116 RHPALPIDLEMNEFLSFFGRRFAIVRTKTDKLNQSA----LAKSKRESEKAFYDFEFIMD 171 Query: 191 TSSVKRKGIEVLRKAILETI 210 SSV KG + L + + Sbjct: 172 FSSVTGKGKKELLSVLSTYL 191 >gi|284038921|ref|YP_003388851.1| ribosome biogenesis GTP-binding protein YsxC [Spirosoma linguale DSM 74] gi|283818214|gb|ADB40052.1| ribosome biogenesis GTP-binding protein YsxC [Spirosoma linguale DSM 74] Length = 201 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 9/193 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + PK PE AF GRSNVGKSSLIN+L +R +LA+ S PG+TQ +N F+ Sbjct: 8 FFVSNSDPAKCPKPDRPEYAFIGRSNVGKSSLINMLTSRSSLAKISGKPGKTQLINHFII 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K + + LI YL+ R L C+++L+D R Sbjct: 68 DN---------EWYLVDLPGYGYAQVSKTEREKFAALIDGYLTSRPNLLCIFVLVDSRIA 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +++D D + L ++ + + IV TK +KL PT Q TLE + + P+ TS+ Sbjct: 119 PQKLDLDFMANLGERGLPFVIVFTKTEKLGPTKLQATLETYRDRLLEDWEEAPQFFVTSA 178 Query: 194 VKRKGIEVLRKAI 206 V G E + I Sbjct: 179 VTAVGREDILSFI 191 >gi|312143238|ref|YP_003994684.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium sp. 'sapolanicus'] gi|311903889|gb|ADQ14330.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium sp. 'sapolanicus'] Length = 200 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 101/201 (50%), Gaps = 11/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F + V + P+ PE+AFSGRSNVGKSSLIN + RK LARTSN PGRTQ LN Sbjct: 4 SNAKFYKSVYKYEECPRLQQPEVAFSGRSNVGKSSLINRITKRKKLARTSNTPGRTQSLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F D LVD+PGYG+A PKK D W LI YL+ R L + +ID Sbjct: 64 YFNIDD---------KFYLVDLPGYGFANVPKKVKDDWAELIDSYLNYRENLIGIVQIID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + +L +S+ I TK+DK+S + + + I Sbjct: 115 SRHKPTKDDKMMVEWLKASGLSFLIAATKVDKISNNERAKQKKIILKELN--LDKEDNFI 172 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ +G + + + + Sbjct: 173 FFSAETGEGSKEIYNYLESLL 193 >gi|255994399|ref|ZP_05427534.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium saphenum ATCC 49989] gi|255993112|gb|EEU03201.1| ribosome biogenesis GTP-binding protein YsxC [Eubacterium saphenum ATCC 49989] Length = 205 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 72/192 (37%), Positives = 109/192 (56%), Gaps = 10/192 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PEIAF+GRSNVGKSSL+N+L RK+LA+ S+ PG+T+ +NF+ D Sbjct: 12 CGRVDQFPDETLPEIAFAGRSNVGKSSLLNMLTGRKSLAKISSKPGKTRTINFYNVDD-- 69 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 A +VD+PGYG+ARAP+ ++ W LI Y+ +R L V LID RH + Sbjct: 70 -------AFRIVDLPGYGFARAPRSEMEKWAKLIETYIEKRGNLIAVTSLIDIRHDPTDL 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-YPTAHPEVIPTSSVKR 196 D+ + +L + + +VLTK DK+ + + L K ++ N Y IP S++KR Sbjct: 123 DRQLCLYLKEMNLLKTVVLTKADKIPKSQVNKKLGIVKKILSNEYDINGVRFIPVSALKR 182 Query: 197 KGIEVLRKAILE 208 +G E L +++ Sbjct: 183 QGKEELMNELIK 194 >gi|269215622|ref|ZP_06159476.1| ribosome biogenesis GTP-binding protein YsxC [Slackia exigua ATCC 700122] gi|269131109|gb|EEZ62184.1| ribosome biogenesis GTP-binding protein YsxC [Slackia exigua ATCC 700122] Length = 201 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 99/198 (50%), Gaps = 12/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F +P + PEI F+GRSNVGKSSL+N L NRK LA+ S PG+T +NFF Sbjct: 8 FKASYATPDQIPLSLRPEIVFAGRSNVGKSSLLNRLFNRKRLAKVSQTPGKTAAVNFFTA 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D VD+PGYG+A+ K + W L+ Y V L+D RH Sbjct: 68 EDAD----------FVDLPGYGFAKVSKAEIARWRRLMSAYFESDRRFALVVSLVDIRHP 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +D + FL + + + IVLTK DKLS + A + + + A VI SS Sbjct: 118 ATALDVQMIEFLIRYDLPFVIVLTKADKLSRSKAFSAVSALRRQLG--LGADIPVIACSS 175 Query: 194 VKRKGIEVLRKAILETIN 211 K GI+ L+ + ++++ Sbjct: 176 EKGTGIDALKALMQDSVH 193 >gi|238923372|ref|YP_002936888.1| GTPase EngB [Eubacterium rectale ATCC 33656] gi|238875047|gb|ACR74754.1| GTPase EngB [Eubacterium rectale ATCC 33656] gi|291525459|emb|CBK91046.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Eubacterium rectale DSM 17629] gi|291528433|emb|CBK94019.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Eubacterium rectale M104/1] Length = 260 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 11/189 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P E+AF+G+SNVGKSSLIN L+NRK+LAR S+ PG+TQ +NF+ D Sbjct: 16 STIPDNEYNEVAFAGKSNVGKSSLINALMNRKSLARISSQPGKTQTINFYNVND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 AM LVD+PGYGYA A + WG +I YL L+ V+LLID RH D + Sbjct: 70 ---AMYLVDLPGYGYANANIEIKAKWGQMIENYLHTSKKLQAVFLLIDIRHEPSDNDIMM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + I+ TK DKL + ++ K ++ P VIP SS+ ++G + Sbjct: 127 YDWMVNQGFAPIIIATKSDKLKKSQIAAHIKTIKDVLHVKPGTV--VIPFSSMSKEGRDE 184 Query: 202 LRKAILETI 210 + I + Sbjct: 185 IWNLIDSLV 193 >gi|15644215|ref|NP_229266.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga maritima MSB8] gi|13124246|sp|Q9X1H7|ENGB_THEMA RecName: Full=Probable GTP-binding protein EngB gi|4982031|gb|AAD36534.1|AE001797_14 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 195 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 100/192 (52%), Gaps = 12/192 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ G P E+AF GRSNVGKSSL+N L NRK +A S PG+T+ +NF++ Sbjct: 9 VKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-IAFVSKTPGKTRSINFYLVN 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 VD+PGYGYA+ KK W L+ Y R +L+ V+LL+D R Sbjct: 68 ---------SKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPP 118 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + ++ + + IVLTK+DK+ + + LE+ + + Y +IPTSSV Sbjct: 119 QDSDLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEY--TIIPTSSV 176 Query: 195 KRKGIEVLRKAI 206 +GI L I Sbjct: 177 TGEGISELLDLI 188 >gi|82703200|ref|YP_412766.1| GTPase EngB [Nitrosospira multiformis ATCC 25196] gi|119369223|sp|Q2Y797|ENGB_NITMU RecName: Full=Probable GTP-binding protein EngB gi|82411265|gb|ABB75374.1| cell division checkpoint GTPase YihA [Nitrosospira multiformis ATCC 25196] Length = 235 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 100/203 (49%), Gaps = 12/203 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F V E+ LP EIAF+GRSN GKSS IN L NR LA S PGRTQHLN Sbjct: 5 QNATFYTTVNELRDLPPPVGVEIAFAGRSNAGKSSAINTLANRNRLAFVSKTPGRTQHLN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + LVD+PGYGYA+ P + W L+ YL R +L + L++D Sbjct: 65 FFRLGNDR---------FLVDLPGYGYAKVPAEVRQHWERLLGTYLQTRQSLHGMVLIMD 115 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-YPTAHPEV 188 RH + +D+ + ++ + ++LTK DKL+ Q+ L+ +R YP V Sbjct: 116 ARHPLTPLDRQMLAWFAPTKKAVHVLLTKSDKLTRQQGQKVLKTVLGFLRESYPQC--SV 173 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS R+G++ + Sbjct: 174 QLFSSTSREGVKEAAALLDAWFG 196 >gi|168013946|ref|XP_001759525.1| predicted protein [Physcomitrella patens subsp. patens] gi|162689455|gb|EDQ75827.1| predicted protein [Physcomitrella patens subsp. patens] Length = 222 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 97/201 (48%), Gaps = 14/201 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P G PE A GRSNVGKSSLIN LV+RK LA+TS PG+TQ +N ++ Sbjct: 25 FIKSSSKESECPHEGHPEFALVGRSNVGKSSLINALVHRKELAQTSKKPGKTQLINHYLI 84 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+AP W Y +R TL V LL+D Sbjct: 85 N---------KTWYLVDLPGYGYAKAPTAIRTDWNEFTKGYFLKRQTLVSVLLLVDSSIE 135 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 +QID D +L + + IV TK D+ +E ++ I+ P Sbjct: 136 PQQIDLDCVGWLGRNKIPVTIVFTKCDRKKKKKNGGRKPEENIKDFLDRIKPLYAETPPW 195 Query: 189 IPTSSVKRKGIEVLRKAILET 209 I TSS +G E L + I + Sbjct: 196 IMTSSETNQGKEELLRHIAQL 216 >gi|121603574|ref|YP_980903.1| ribosome biogenesis GTP-binding protein YsxC [Polaromonas naphthalenivorans CJ2] gi|120592543|gb|ABM35982.1| GTP-binding protein, HSR1-related protein [Polaromonas naphthalenivorans CJ2] Length = 259 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 104/203 (51%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL PE+ LP+ PEIAF GRSN GKS+ IN L + LA S PGRTQ +N Sbjct: 29 HTAKFLTTAPELKHLPRIEVPEIAFVGRSNAGKSTCINTLTQQHRLAFASKTPGRTQSIN 88 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K + L D+PGYGYA PK+ W ++ YL R L+ + LL D Sbjct: 89 LFSLG-----KQGVTDAVLADLPGYGYAAVPKEAKYRWQQVMGNYLQTRDNLKAIVLLCD 143 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + + + + ++LTK DKL+ T A + L+ K Sbjct: 144 PRLGLTELDEVLLDVIRPRVEAGLKFLVLLTKSDKLNKTDAAKALQIVK-----LQAGGG 198 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 +V SS+KR+G+E + + + + Sbjct: 199 DVKLFSSLKRQGVEEVAQHLWDW 221 >gi|160944173|ref|ZP_02091403.1| hypothetical protein FAEPRAM212_01680 [Faecalibacterium prausnitzii M21/2] gi|158444849|gb|EDP21853.1| hypothetical protein FAEPRAM212_01680 [Faecalibacterium prausnitzii M21/2] gi|295105079|emb|CBL02623.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Faecalibacterium prausnitzii SL3/3] Length = 200 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 101/201 (50%), Gaps = 14/201 (6%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 IF K+ F+ LP++ PE++FSGRSNVGKSSLIN L +RKNLAR S+ PG+T Sbjct: 2 IFNKAD--FIASYGISSQLPESDRPELSFSGRSNVGKSSLINKLCSRKNLARVSSTPGKT 59 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 +NF+ D VD+PGYGYA+ + + W LI Y + Sbjct: 60 ATINFYSVDD----------CYFVDLPGYGYAKVSNADRERWDDLINSYFEAPRHHTLLV 109 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 L+DCRH D + +L + Y + LTK DKL + +T E + + R Y Sbjct: 110 QLLDCRHAPSADDLQMLRYLHYHRIPYVVALTKADKLKKSQLAKTQEDFENICRPYGCQ- 168 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 +V+ TS GI L+ + Sbjct: 169 -KVVLTSGENGYGIPELQAVL 188 >gi|116878627|ref|YP_358147.2| ribosome biogenesis GTP-binding protein YsxC [Pelobacter carbinolicus DSM 2380] gi|119369227|sp|Q3A0Y0|ENGB_PELCD RecName: Full=Probable GTP-binding protein EngB gi|114843263|gb|ABA89977.2| GTP-binding protein [Pelobacter carbinolicus DSM 2380] Length = 207 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 12/197 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F++ + P PE+AF+GRSNVGKSSLIN+LVNR+ L RTS+ PGRTQ LN Sbjct: 4 KSAEFIKSAAKPVGYPPGDLPEVAFAGRSNVGKSSLINVLVNRRGLVRTSSTPGRTQLLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF LVD+PG+G+A+ P +WG + YL ER+ L+ V LL D Sbjct: 64 FFEVNQH---------FMLVDLPGFGFAKVPVSVKKAWGRMTRTYLEERTNLKAVVLLFD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R + + + +L++ + V+TK+DK++ + + + ++ Sbjct: 115 IRREPRDEELQLLDWLEELNIPTIPVITKVDKVTKNRRR---AQIRPILEATGLPQEAFS 171 Query: 190 PTSSVKRKGIEVLRKAI 206 S++ R+G E + + + Sbjct: 172 FFSALTREGREDILQRL 188 >gi|239616939|ref|YP_002940261.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1] gi|259645901|sp|C5CEL1|ENGB_KOSOT RecName: Full=Probable GTP-binding protein EngB gi|239505770|gb|ACR79257.1| small GTP-binding protein [Kosmotoga olearia TBF 19.5.1] Length = 190 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 109/193 (56%), Gaps = 12/193 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ + G P+ E+AF+GRSNVGKS+L+N L RK LA TS+ PG+T+ +NF++ Sbjct: 9 VKTAFKPGDYPEPVKREVAFAGRSNVGKSTLLNTLFQRK-LAHTSSKPGKTRSINFYLVN 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 VD+PGYG+A A K+ + W LI Y S R L V +L+D RH + Sbjct: 68 ---------SKYYFVDLPGYGFASASKQELARWKELIEDYFSTRDNLNLVTILMDSRHPM 118 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 ++ D + ++ ++ + +VLTK DKLS ++ ++ + ++ + P +IP S+ Sbjct: 119 QKNDYKMLEWIKDYSIPFIVVLTKTDKLSGNELKKMIQIYEKELKLW--GSPPIIPFSAK 176 Query: 195 KRKGIEVLRKAIL 207 R+G+ L K ++ Sbjct: 177 TRRGLNELLKILI 189 >gi|239814137|ref|YP_002943047.1| ribosome biogenesis GTP-binding protein YsxC [Variovorax paradoxus S110] gi|239800714|gb|ACS17781.1| GTP-binding protein HSR1-related [Variovorax paradoxus S110] Length = 247 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P++ LP PEIAF GRSN GKS+ IN L + LA S PGRTQH+N Sbjct: 35 HTAHFLTSAPQLEHLPPLDLPEIAFVGRSNAGKSTAINTLTQQTRLAFASKTPGRTQHIN 94 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K L D+PGYGYA PK+ W ++ YL R LR V L+ D Sbjct: 95 LFGVG-----KQKADDAVLADLPGYGYAAVPKEAKLRWQRVMGNYLMTRENLRGVVLMCD 149 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RHG+ ++D+ + + ++ + + ++LTK DKL+ + + L T+ Sbjct: 150 PRHGMTELDEILLDVIRPRVEQGLKFLVLLTKADKLTRSEGAKVLSITR-----LQAGGG 204 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S++K++G+ + + Sbjct: 205 EVKLFSALKKQGVGEAAELLWRW 227 >gi|313159636|gb|EFR58994.1| ribosome biogenesis GTP-binding protein YsxC [Alistipes sp. HGB5] Length = 197 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 9/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F I +PK +IAF GRSNVGKSSLIN+L R+ LA+ S PG+T+ +N Sbjct: 4 NKAEFKCSSERISQVPKDALKDIAFIGRSNVGKSSLINMLTGRQGLAKVSGTPGKTRLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + A LVD+PGYGYAR K + +I Y+ + + +++L D Sbjct: 64 HFLIDN---------AWYLVDLPGYGYARTSKTKRSEFSKIITDYVLKCEKMHFLFVLAD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R ++ID L + + ++ TK DKLS T ++++E+ + + P + Sbjct: 115 LRLEPQKIDLQFIEMLGMNGIPFAVIFTKADKLSKTQREKSVERYRAALAEQWEELPRMF 174 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 +SS G E + I E +N Sbjct: 175 VSSSQHGTGREEILGFIGECLN 196 >gi|289668455|ref|ZP_06489530.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 188 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 96/188 (51%), Gaps = 9/188 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P G E+AF+GRSN GKSS +N L + +LAR S PGRTQ L FF + Sbjct: 1 MPNDGGFEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQQLVFFQIQ--------- 51 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 52 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 111 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL +TL+K K + + V S R+G++ LR Sbjct: 112 YAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSGESRQGVDELR 171 Query: 204 KAILETIN 211 + + Sbjct: 172 GIVGGWLG 179 >gi|85860199|ref|YP_462401.1| ribosome biogenesis GTP-binding protein YsxC [Syntrophus aciditrophicus SB] gi|119369274|sp|Q2LVW9|ENGB_SYNAS RecName: Full=Probable GTP-binding protein EngB gi|85723290|gb|ABC78233.1| GTP-binding protein [Syntrophus aciditrophicus SB] Length = 196 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 99/197 (50%), Gaps = 15/197 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P PE+AF GRSNVGKSSLIN L+ RK LARTSN PGRTQ +NFF Sbjct: 8 FVKSATLPSGYPPGSLPEVAFVGRSNVGKSSLINTLLRRKQLARTSNTPGRTQLINFFNV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+AR P+ WG +I YL +R LR V ++D R Sbjct: 68 NQ---------ELLFVDLPGYGFARVPEAVKREWGPMIETYLRDRECLRMVVFILDIRRD 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV-IPTS 192 Q D + +LD VLTK DKLS ++ + + A PE+ + S Sbjct: 119 PSQEDLALKGWLDYYGRRTLFVLTKSDKLSRGESKRRQRSVQESL-----ALPEMPLIFS 173 Query: 193 SVKRKGIEVLRKAILET 209 + G E + + I + Sbjct: 174 AKTGLGRERILEEIRKA 190 >gi|78189773|ref|YP_380111.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium chlorochromatii CaD3] gi|119368800|sp|Q3APK7|ENGB_CHLCH RecName: Full=Probable GTP-binding protein EngB gi|78171972|gb|ABB29068.1| GTP-binding protein [Chlorobium chlorochromatii CaD3] Length = 194 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 100/197 (50%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + LP+A PEI F+GRSNVGKSSL+N L K LA+TS PG+T+ +N+F+ Sbjct: 8 FVASYTSLHALPEAVLPEIVFAGRSNVGKSSLLNSLTGLKGLAKTSAKPGKTRQINYFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA + +WG L+ Y+ R + V +L+D RH Sbjct: 68 NEL---------FYFVDLPGYGYAAVSQSEKAAWGQLLANYIERRDAISLVVVLVDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + FL+ Y IV+TK DKL+ + K + + + Y V+ SS Sbjct: 119 FMENDVAMLEFLEFHGRPYGIVMTKSDKLNQSEK----SKCQRVAKTYAAKAKFVVNYSS 174 Query: 194 VKRKGIEVLRKAILETI 210 G +L I +I Sbjct: 175 FSGAGKALLLSHIDHSI 191 >gi|319788336|ref|YP_004147811.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoxanthomonas suwonensis 11-1] gi|317466848|gb|ADV28580.1| ribosome biogenesis GTP-binding protein YsxC [Pseudoxanthomonas suwonensis 11-1] Length = 206 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 9/200 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 +L LP G E+AF+GRSN GKSS +N L + LAR S PGRTQ L + Sbjct: 7 KARYLGSAHTPAQLPPDGGFEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVY 66 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F P LVD+PGYGYA+ P W + + R LR + +++D Sbjct: 67 FEVA---------PERYLVDLPGYGYAKVPMDLKAHWERFLDNWFRTREALRGLVVVMDI 117 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH +K D+ + + + + +LTK DKL + + + + V Sbjct: 118 RHPLKDYDRQMIDYAVARGLPAHALLTKADKLGRGQQAQAVAAVRRELAAAGAGGVGVQA 177 Query: 191 TSSVKRKGIEVLRKAILETI 210 SS ++G++ R + + Sbjct: 178 FSSENKQGVDEARAVVNGWL 197 >gi|297836256|ref|XP_002886010.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] gi|297331850|gb|EFH62269.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] Length = 300 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 99/202 (49%), Gaps = 12/202 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ K PEIA GRSNVGKSSLIN LV +K +A TS PG+TQ +N F+ Sbjct: 105 FVKSSARARDCTKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLV 164 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYG+A+ W Y R TL CV LLID Sbjct: 165 N---------KSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDTLVCVLLLIDASVP 215 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ---ETLEKTKYLIRNYPTAHPEVIP 190 ++ID D ++L + V V TK DK+ T + E ++ + +I+ HP I Sbjct: 216 PQKIDLDCANWLGRNNVQMTFVFTKCDKMKATKGKRPDENIKAFQQIIKENFKVHPPWIL 275 Query: 191 TSSVKRKGIEVLRKAILETINY 212 TSSV G + L + + NY Sbjct: 276 TSSVSGLGRDELLLHMSQLRNY 297 >gi|313893181|ref|ZP_07826758.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral taxon 158 str. F0412] gi|313442534|gb|EFR60949.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. oral taxon 158 str. F0412] Length = 222 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 77/199 (38%), Positives = 104/199 (52%), Gaps = 7/199 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A + + P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+ Sbjct: 19 AAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINY 78 Query: 71 FVPK---DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 F + D S + LVD+PGYG+A+ K N + W I Y+ L + LL Sbjct: 79 FDIESKEDISETEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLCLL 138 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID RH ID+ + +L + V QIV+TK DKL+ L K K + YPT P Sbjct: 139 IDGRHPEMPIDKVAYDWLVEAGVPLQIVVTKADKLTAKEKSANLAKIKEM---YPTDTPP 195 Query: 188 VIPTSSVKRKGIEVLRKAI 206 I SS+K G E+L++ I Sbjct: 196 -ILYSSLKHTGRELLQQRI 213 >gi|260220214|emb|CBA27528.1| Probable GTP-binding protein engB [Curvibacter putative symbiont of Hydra magnipapillata] Length = 251 Score = 210 bits (536), Expect = 8e-53, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P++ LP+ PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 40 HTARFLTTAPQLHFLPELDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHIN 99 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K L D+PGYGYA PK++ W ++ YL R L+ + L+ D Sbjct: 100 LFALG-----KQGATDAVLTDLPGYGYAAVPKQDKIRWQQVMANYLVTRKNLKAIVLMCD 154 Query: 130 CRHGVKQIDQDVFSFLDKK---AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RHG+ ++D+ + + + + + +VLTK DKL+ + + L TK Sbjct: 155 PRHGMTELDEILLDVIRPRVAEGLKFLVVLTKADKLTRSEGAKVLSITK-----LQAGGG 209 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S+ KR GI+ + + + Sbjct: 210 EVRLFSATKRTGIDEVATLLWDW 232 >gi|289662601|ref|ZP_06484182.1| ribosome biogenesis GTP-binding protein YsxC [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 188 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 65/188 (34%), Positives = 94/188 (50%), Gaps = 9/188 (4%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P G E+AF+GRSN GKSS +N L + LAR S PGRTQ L FF + Sbjct: 1 MPDDGGFEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQ--------- 51 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYGYA+ P+ W I RY R LR + +++D RH +K D + Sbjct: 52 PERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLG 111 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + ++ + +LTK DKL + L+K K + + V S R+G++ LR Sbjct: 112 YAAERGLPAHGLLTKADKLGRGQQMQALQKVKKEVTSRFGDSVTVQTYSGESRQGVDELR 171 Query: 204 KAILETIN 211 + + Sbjct: 172 GIVGGWLG 179 >gi|170289148|ref|YP_001739386.1| small GTP-binding protein [Thermotoga sp. RQ2] gi|238688853|sp|B1LBK5|ENGB_THESQ RecName: Full=Probable GTP-binding protein EngB gi|170176651|gb|ACB09703.1| small GTP-binding protein [Thermotoga sp. RQ2] Length = 195 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 100/192 (52%), Gaps = 12/192 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ G P E+AF GRSNVGKSSL+N L NRK +A S PG+T+ +NF++ Sbjct: 9 VKIARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRK-VAFVSKTPGKTRSINFYLVN 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 VD+PGYGYA+ KK W L+ Y R +L+ V+LL+D R Sbjct: 68 ---------SKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPP 118 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + ++ + + IVLTK+DK+ + + LE+ + + Y +IPTSSV Sbjct: 119 QDSDFMMIEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSRYGEY--TIIPTSSV 176 Query: 195 KRKGIEVLRKAI 206 +GI L I Sbjct: 177 TGEGISELLDLI 188 >gi|89901959|ref|YP_524430.1| ribosome biogenesis GTP-binding protein YsxC [Rhodoferax ferrireducens T118] gi|119369243|sp|Q21TK4|ENGB_RHOFD RecName: Full=Probable GTP-binding protein EngB gi|89346696|gb|ABD70899.1| GTP-binding protein, HSR1-related [Rhodoferax ferrireducens T118] Length = 207 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 103/203 (50%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P++ LP PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 7 HTAKFLTTAPQLHFLPALDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K + D+PGYGYA PK++ W ++ YL R L+ + L+ D Sbjct: 67 LFSLG-----KQGVTDAVFADLPGYGYAAVPKQDKIRWQQVMANYLVTRENLKAIVLMCD 121 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RHG+ ++D+ + + ++ + + +VLTK DKL+ T + L K Sbjct: 122 PRHGLTELDEILLDIVRPRVEEGLKFLVVLTKADKLTRTEQTKALSIMK-----LQAGGG 176 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S+ KR+GI+ + + + Sbjct: 177 EVRLFSATKRQGIDDVATLLWQW 199 >gi|289812207|ref|ZP_06542836.1| ribosome biogenesis GTP-binding protein YsxC [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 163 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 9/162 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P+I LP E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F Sbjct: 11 FVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA P++ W + YL +R +L+ + +L+D RH Sbjct: 71 VDGK---------RLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 +K +DQ + + + + ++LTK DKL+ + L + Sbjct: 122 LKDLDQQMIQWAVESNIQVLVLLTKADKLASGARKAQLNMVR 163 >gi|332529500|ref|ZP_08405458.1| GTP-binding protein YsxC [Hylemonella gracilis ATCC 19624] gi|332041020|gb|EGI77388.1| GTP-binding protein YsxC [Hylemonella gracilis ATCC 19624] Length = 221 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 103/203 (50%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL P++ LP PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 5 HTARFLTTSPDLLHLPPLDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHIN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K + L D+PGYGYA P ++ W ++ YL R L + LL D Sbjct: 65 LFSLG-----KQGVTDAMLADLPGYGYAAVPMQDKLRWQQVMANYLVTRENLAAIVLLCD 119 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RHG+ ++D+ + + ++ + + IVLTK DKL+ + A + L I Sbjct: 120 PRHGLTELDEVLLEVIRPRVEQGLKFLIVLTKADKLTRSEAAKALS-----IAKLNAGGG 174 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S+ KR G++ + + + + Sbjct: 175 EVRLFSATKRIGVDEVSRLLWDW 197 >gi|189502027|ref|YP_001957744.1| hypothetical protein Aasi_0617 [Candidatus Amoebophilus asiaticus 5a2] gi|238692308|sp|B3ES13|ENGB_AMOA5 RecName: Full=Probable GTP-binding protein EngB gi|189497468|gb|ACE06015.1| hypothetical protein Aasi_0617 [Candidatus Amoebophilus asiaticus 5a2] Length = 210 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 99/201 (49%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 IF+ P A EIAF GRSNVGKSSL+N+++ +K LA+TS PG+TQ +N Sbjct: 4 QEAIFVTSSATYKKCPPADKAEIAFIGRSNVGKSSLVNMILGQKKLAKTSARPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ LVD+PGYG+A+A K W ++ +YL R L C+++L+D Sbjct: 64 HFLVNQ---------KYYLVDLPGYGWAQASKTQRIGWNKMVNQYLLYRENLACLFVLLD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R ++ID +FL + + IVLTK DK+S L K + + Sbjct: 115 IRLPPQKIDLLFINFLIDNDIPFAIVLTKADKISKQQVVNQLATFKRTLAPSTKESLNYV 174 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS + G I + + Sbjct: 175 VTSSKNQAGKIEALNCIGQIV 195 >gi|281412764|ref|YP_003346843.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga naphthophila RKU-10] gi|281373867|gb|ADA67429.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga naphthophila RKU-10] Length = 195 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ G P E+AF GRSNVGKSSL+N L N+K +A S PG+T+ +NF++ Sbjct: 9 VKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNKK-IAFVSKTPGKTRSINFYLVN 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 VD+PGYGYA+ KK W L+ Y R +L+ V+LL+D R Sbjct: 68 ---------SKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPP 118 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + ++ + + IVLTK+DK+ + + LE+ + Y +IPTSSV Sbjct: 119 QDSDLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHQKEFSRYGEY--TIIPTSSV 176 Query: 195 KRKGIEVLRKAI 206 +GI L I Sbjct: 177 TGEGISELLDLI 188 >gi|148270457|ref|YP_001244917.1| ribosome biogenesis GTP-binding protein YsxC [Thermotoga petrophila RKU-1] gi|166232160|sp|A5IMB8|ENGB_THEP1 RecName: Full=Probable GTP-binding protein EngB gi|147736001|gb|ABQ47341.1| small GTP-binding protein [Thermotoga petrophila RKU-1] Length = 195 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 12/192 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ G P E+AF GRSNVGKSSL+N L N+K +A S PG+T+ +NF++ Sbjct: 9 VKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNKK-IAFVSKTPGKTRSINFYLVN 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 VD+PGYGYA+ KK W L+ Y R +L+ V+LL+D R Sbjct: 68 ---------SKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPP 118 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + ++ + + IVLTK+DK+ + + LE+ + Y +IPTSSV Sbjct: 119 QDSDFMMIEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHQKEFSRYGEY--TIIPTSSV 176 Query: 195 KRKGIEVLRKAI 206 +GI L I Sbjct: 177 TGEGISELLDLI 188 >gi|199598205|ref|ZP_03211627.1| Predicted GTPase [Lactobacillus rhamnosus HN001] gi|229552143|ref|ZP_04440868.1| GTPase [Lactobacillus rhamnosus LMS2-1] gi|258508348|ref|YP_003171099.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus rhamnosus GG] gi|258539557|ref|YP_003174056.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus rhamnosus Lc 705] gi|199590966|gb|EDY99050.1| Predicted GTPase [Lactobacillus rhamnosus HN001] gi|229314445|gb|EEN80418.1| GTPase [Lactobacillus rhamnosus LMS2-1] gi|257148275|emb|CAR87248.1| GTP-binding protein engB [Lactobacillus rhamnosus GG] gi|257151233|emb|CAR90205.1| GTP-binding protein engB [Lactobacillus rhamnosus Lc 705] gi|259649662|dbj|BAI41824.1| putative GTPase [Lactobacillus rhamnosus GG] Length = 199 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 98/194 (50%), Gaps = 11/194 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+ G PEIAF GRSNVGKSSLIN L+ RK +ARTS+ PG+TQ LNF+ Sbjct: 10 ISAVAAAQYPEDGRPEIAFLGRSNVGKSSLINKLIKRKAMARTSSVPGKTQTLNFYDLDS 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ K + +I YL+ R LR V LL+D RH Sbjct: 70 R---------LFFVDVPGYGYAKVSKSARAKFAAMIETYLTTRQPLRGVVLLVDSRHEPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D ++ +L + +V TKIDK + +++ + VIP S+V Sbjct: 121 ADDISMYQYLKYYQLRTLVVATKIDKTPKSKRLHVVKQINQRLD--LNQTDTVIPFSAVT 178 Query: 196 RKGIEVLRKAILET 209 +G + + + +T Sbjct: 179 GEGYDAIWSWLSQT 192 >gi|168335351|ref|ZP_02693446.1| GTPase EngB [Epulopiscium sp. 'N.t. morphotype B'] Length = 196 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P EIAF+G+SNVGKSSLIN+L+NRK LARTS+ PG+TQ +NF+ + Sbjct: 9 IITAGNKKQFPDNNQIEIAFAGKSNVGKSSLINVLINRKALARTSSTPGKTQTINFYNIQ 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D VD+PGYGYA+ K +SWG I YL +RS+L+ V LLID RH Sbjct: 69 D---------KFNFVDLPGYGYAKVSKTLRESWGKFIEDYLGKRSSLKQVVLLIDIRHAP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ +++++ + +V TK+DK+ + + + K +++ T +IP S+ Sbjct: 120 SENDKLMYNWISFFHDNVLVVATKVDKIKRSQIAKHISIIKSVLQLRTT--DRIIPFSAA 177 Query: 195 KRKGIEVLRKAI 206 + G E + + + Sbjct: 178 TKVGKEEIWELL 189 >gi|303229336|ref|ZP_07316126.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica ACS-134-V-Col7a] gi|303231340|ref|ZP_07318074.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica ACS-049-V-Sch6] gi|302513936|gb|EFL55944.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica ACS-049-V-Sch6] gi|302515872|gb|EFL57824.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella atypica ACS-134-V-Col7a] Length = 232 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 7/203 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A + + P+ E+AF GRSNVGKSSLIN L N + LA S PG+T+ +N+ Sbjct: 29 AAKYNTSCVKADQYPEGDTVEVAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINY 88 Query: 71 FVPK---DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 F + D S + LVD+PGYG+A+ K N + W I Y+ L + LL Sbjct: 89 FDIESKEDISETEERRYHWFLVDLPGYGFAKTNKDNRNMWSSFISDYILHSERLMLLCLL 148 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID RH ID+ F +L + V QIV+TK+DKL+ L K K + YPT P Sbjct: 149 IDGRHPEMPIDKVAFDWLVEAGVPLQIVVTKVDKLNAKEKSVNLAKVKAM---YPTDSPP 205 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 I SS+K G E+L++ I + + Sbjct: 206 -IMYSSLKHTGRELLQQRINQVL 227 >gi|319892718|ref|YP_004149593.1| GTP-binding protein EngB [Staphylococcus pseudintermedius HKU10-03] gi|317162414|gb|ADV05957.1| GTP-binding protein EngB [Staphylococcus pseudintermedius HKU10-03] Length = 198 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L + P+ PE+A SGRSNVGKS+ IN +V RKN+ARTS PG+TQ LNFF Sbjct: 11 LISAVKPEQYPELDLPEVALSGRSNVGKSTFINSMVGRKNMARTSQQPGKTQTLNFF--- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 N + VD+PGYGYA+ KK +++G +I Y++ R L+ V L+D RH Sbjct: 68 ------NIDNQLIFVDVPGYGYAKVSKKQREAFGKMIETYITTREALKLVIQLVDLRHPP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL + I+ TK DK+ Q+ ++ K + + ++I SS+ Sbjct: 122 TEDDVLMYDFLKYYDIPTLIIATKEDKIPKGKVQKHIKIIKEKLE--LESGDQIISYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 ++K + + AI I Sbjct: 180 EKKKQDQIWAAISAFI 195 >gi|88607557|ref|YP_505024.1| GTPase EngB [Anaplasma phagocytophilum HZ] gi|119368790|sp|Q2GKS7|ENGB_ANAPZ RecName: Full=Probable GTP-binding protein EngB gi|88598620|gb|ABD44090.1| putative GTP-binding protein EngB [Anaplasma phagocytophilum HZ] Length = 193 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 9/197 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ GV + P G PE+AF+GRSNVGKSSLIN + N K A+TS+ PG T+ +NF++ Sbjct: 6 FVAGVQDRKSFPDFGVPEVAFAGRSNVGKSSLINAITNNKKNAKTSSNPGSTRQINFYLN 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K +ALVD+PGYGY++A K+ + ++ YL R L+ + LLID R G Sbjct: 66 KGI---------VALVDLPGYGYSKASKEATRGYLDVMEHYLMSREALQRLVLLIDSRIG 116 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K+ID+D +L++ + Y IVLTK DKLS + + + ++ SS Sbjct: 117 LKEIDRDFLCWLEEHGIYYSIVLTKADKLSEQALGSMVSFVQNQAQGGNFLLQPIMWVSS 176 Query: 194 VKRKGIEVLRKAILETI 210 +GI L I I Sbjct: 177 KSGRGIRELAHEISRCI 193 >gi|115439749|ref|NP_001044154.1| Os01g0732200 [Oryza sativa Japonica Group] gi|57899709|dbj|BAD87429.1| putative GTP-binding protein [Oryza sativa Japonica Group] gi|113533685|dbj|BAF06068.1| Os01g0732200 [Oryza sativa Japonica Group] gi|215695283|dbj|BAG90474.1| unnamed protein product [Oryza sativa Japonica Group] Length = 316 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 105/207 (50%), Gaps = 14/207 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A F++ P+ G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N Sbjct: 115 AADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINH 174 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F D + LVD+PGYGYA AP++ +W Y R L V+LL+D Sbjct: 175 FKVND---------SWYLVDLPGYGYAAAPQEARTNWDEFTRNYFLGRENLVSVFLLVDA 225 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAH 185 K+ID D S+L + V +V TK DK +E +E + LIR Y A Sbjct: 226 SIPAKKIDLDYASWLGQNKVPMTLVFTKCDKRKKKKNGGKRPEENVENFQSLIREYFEAA 285 Query: 186 PEVIPTSSVKRKGIEVLRKAILETINY 212 P I TSSV +G + + + + NY Sbjct: 286 PPWIMTSSVTNQGRDEILLHMSQLRNY 312 >gi|227824394|ref|ZP_03989226.1| GTP-binding protein [Acidaminococcus sp. D21] gi|226904893|gb|EEH90811.1| GTP-binding protein [Acidaminococcus sp. D21] Length = 210 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 99/201 (49%), Gaps = 5/201 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF--F 71 F+ + P+ E+AF GRSNVGKSSL+N L RK LAR S++PG+TQ +NF F Sbjct: 13 FVASAVKATQYPQDTVDEVAFIGRSNVGKSSLLNSLARRKGLARVSSSPGKTQTINFYSF 72 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 K + + VD+PGYG+AR + + W I +Y+ L+ V +L+D R Sbjct: 73 RAKKTTEKEPLRHTFYAVDLPGYGFARTSQSQKNQWSAFICKYMENSRDLKLVCILMDIR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 H + D D + +L + I+LTK DKL+ E K + + ++ Sbjct: 133 HAPMESDIDCYQWLLSLGIPLMIILTKSDKLNKGAVAAQKELYK---KTFGLDDDRILTY 189 Query: 192 SSVKRKGIEVLRKAILETINY 212 +S L + IL T+ + Sbjct: 190 TSTAHTNRRELIERILATLGH 210 >gi|225166344|ref|ZP_03728026.1| GTPase EngB [Opitutaceae bacterium TAV2] gi|224799414|gb|EEG17961.1| GTPase EngB [Opitutaceae bacterium TAV2] Length = 213 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 9/203 (4%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +I +F + P + P G E AF GRSNVGKSSL+N+L +K+LA+ S PG+ Sbjct: 15 SIMKIKTAVFEKSAPNLATSPVWGCREFAFIGRSNVGKSSLLNLLTEQKDLAKVSATPGK 74 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 T+ +NFF + A +LVD+PGYG+A+ + + + RYL +R L CV Sbjct: 75 TRMINFFKINN---------AWSLVDLPGYGFAKVAQHKRSDFNQAVARYLEKRDNLACV 125 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 ++LID R +QID D +L+ + ++ TK DK SPT + + + + T Sbjct: 126 FVLIDSRLPPQQIDLDFIQWLEGTGRPFALIFTKTDKQSPTQTRAKISLFTEALAEWRTE 185 Query: 185 HPEVIPTSSVKRKGIEVLRKAIL 207 P ++ +SS + G + + I Sbjct: 186 PPPILTSSSKTKSGRREILEFIA 208 >gi|291513697|emb|CBK62907.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Alistipes shahii WAL 8301] Length = 198 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 9/200 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F I +PK +IAF GRSNVGKSSLIN+L R LA+ S PG+T+ +N Sbjct: 5 KAEFKCSSERISQVPKDDLKDIAFIGRSNVGKSSLINMLTARTGLAKVSGTPGKTRLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F D A LVD+PGYGYAR K + LI Y+ + + +++L D Sbjct: 65 FRIND---------AWYLVDLPGYGYARTSKTQRSEFSKLITDYVIKCEKMHFLFVLADI 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ID L + + + I+ TK DKLS T ++++E+ + + P + Sbjct: 116 RLEPQKIDLRFIEMLGENGIPFGIIFTKADKLSKTQREKSVERFRTALAQQWEELPPMFV 175 Query: 191 TSSVKRKGIEVLRKAILETI 210 +SS K G E + I E + Sbjct: 176 SSSEKAVGREEILDFIGECL 195 >gi|329770551|ref|ZP_08261929.1| ribosome biogenesis GTP-binding protein YsxC [Gemella sanguinis M325] gi|328836300|gb|EGF85969.1| ribosome biogenesis GTP-binding protein YsxC [Gemella sanguinis M325] Length = 198 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PE+A GRSNVGKSS IN ++ RKN AR S+ PG+T+ LNFF Sbjct: 12 LISAVSKKQYPEHKKPEVAMCGRSNVGKSSFINTILERKNYARVSSKPGKTRTLNFFDID 71 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + LVD+PGYGYA+ K + +IV Y + L V LID RH Sbjct: 72 D---------KLVLVDVPGYGYAKLSKSEKEKLYDMIVEYFTNSQNLGFVLHLIDSRHKP 122 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL+ + + +VLTKIDK+S L K K + +IP SSV Sbjct: 123 SQDDIEMNEFLNYYEIPFVVVLTKIDKISKNELSRNLSKIKKELELTNNMA--IIPFSSV 180 Query: 195 KRKGIEVLRKAILETI 210 + G E + I + + Sbjct: 181 TKLGKEQVLNEIEKVL 196 >gi|238926237|ref|ZP_04657997.1| GTPase [Selenomonas flueggei ATCC 43531] gi|238885917|gb|EEQ49555.1| GTPase [Selenomonas flueggei ATCC 43531] Length = 207 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 99/210 (47%), Gaps = 5/210 (2%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M + TK+A +L P+ P AF GRSNVGKSSLIN L + LA S Sbjct: 1 MSEPVVITKAA--YLASAVRRDQYPEEQCPAAAFIGRSNVGKSSLINSLTRIRQLAHVSG 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG+TQ +NF+ + + LVD+PGYGYA+A +++ ++W I Y Sbjct: 59 KPGKTQTINFYELLMRIDGGEERHPVHLVDLPGYGYAKAARESRNTWAKFIEEYFLHAEN 118 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L V LL+D RH D +F +L + ++ TK DKL T Q+ L + R Sbjct: 119 LHFVALLLDIRHAPMTSDCKMFDWLVAHDIPVLVIATKADKLGRTARQKQLSLMR---RT 175 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++P S K +G L + E + Sbjct: 176 LGVPDLSILPYSVPKNEGRTELLDVMKEYL 205 >gi|148244359|ref|YP_001219053.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Vesicomyosocius okutanii HA] gi|166232161|sp|A5CXJ4|ENGB_VESOH RecName: Full=Probable GTP-binding protein EngB gi|146326186|dbj|BAF61329.1| GTP-binding protein [Candidatus Vesicomyosocius okutanii HA] Length = 199 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 98/199 (49%), Gaps = 11/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + P E+ F+GRSN GKS IN L + LA+ S PGRTQHL FF Sbjct: 10 FLLSCPSLKGCPPDQGYEVIFAGRSNAGKSRAINTLTLQNKLAKVSRTPGRTQHLVFFEL 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L D+PGYGYA+ P+ W + Y ++R LR L++D RH Sbjct: 70 D---------KDRRLADLPGYGYAKVPEHIKVKWYKDMNEYFNQRDCLRGAVLVMDVRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K DQ + + + + QI+LTK DKL A T K I+ Y ++ +V SS Sbjct: 121 LKPFDQMMLDWCNNIHLPTQIILTKSDKLKKIAASNTYFKVLDQIKKY--SYVDVQLFSS 178 Query: 194 VKRKGIEVLRKAILETINY 212 +K++G++ L + Y Sbjct: 179 LKKQGLKKLWTRLDTFFGY 197 >gi|291286241|ref|YP_003503057.1| ribosome biogenesis GTP-binding protein YsxC [Denitrovibrio acetiphilus DSM 12809] gi|290883401|gb|ADD67101.1| ribosome biogenesis GTP-binding protein YsxC [Denitrovibrio acetiphilus DSM 12809] Length = 190 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 12/198 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ E P+ PEIAF+GRSNVGKSS+IN L+ K L + PG+T+ +NF Sbjct: 2 KAEFITSAKEPKGYPETEFPEIAFAGRSNVGKSSMINTLLGTKKLVKVGKTPGKTRLVNF 61 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ D + LVD+PGYG+A+ K WG I Y +ER+ L L++D Sbjct: 62 FLVSDR---------IMLVDLPGYGFAKVSKAEKAQWGETIENYFTERTQLSACVLILDI 112 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + D + +L V I LTK DKLS L K + + + Sbjct: 113 RRDPNEDDLGMLYWLQHYNVKALIALTKCDKLSNNQQISRLAKISKQLNM---PREDFLI 169 Query: 191 TSSVKRKGIEVLRKAILE 208 SS+ +KG E + + I E Sbjct: 170 FSSLSKKGKEDVWEKIEE 187 >gi|158521131|ref|YP_001529001.1| GTP-binding protein HSR1-related [Desulfococcus oleovorans Hxd3] gi|238686898|sp|A8ZXG6|ENGB_DESOH RecName: Full=Probable GTP-binding protein EngB gi|158509957|gb|ABW66924.1| GTP-binding protein HSR1-related [Desulfococcus oleovorans Hxd3] Length = 197 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 12/197 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + P PEIAF+GRSNVGKSS+IN+LVNRKNL +TS+ PG+T+ +NF Sbjct: 5 SAEFVISAVQPSQYPDTDLPEIAFAGRSNVGKSSMINLLVNRKNLVKTSSTPGKTRLINF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + VD+PGYGYA+ +K +WG ++ RYLS R TLR + LL+D Sbjct: 65 FDIN---------GQLMFVDLPGYGYAKVSRKEQKTWGPMVERYLSSRKTLRGLMLLMDL 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R ++ + + + + +++VLTK DK T A + + R E+I Sbjct: 116 RREPREDEFLMMQWCAHYDIPWKMVLTKADKFKKTAADR---RRHEIARAVGIGADEMIL 172 Query: 191 TSSVKRKGIEVLRKAIL 207 S++++ G + + I Sbjct: 173 FSTLQKMGRDPALETIA 189 >gi|295107480|emb|CBL05023.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Gordonibacter pamelaeae 7-10-1-b] Length = 193 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 72/197 (36%), Positives = 102/197 (51%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F R L + PE+AFSGRSNVGKSSL+N L NRK LA+ S PG+T +NFF Sbjct: 8 FERSFGTSAQLTPSTAPEVAFSGRSNVGKSSLLNKLFNRKGLAKVSQTPGKTATINFF-- 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + VD+PGYGYA+ K W LI Y ++ + V L+D RH Sbjct: 66 --------DGDGVTFVDLPGYGYAKVSKSEKARWSELIEGYFNQDRSFALVVALVDIRHE 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++D+++ FL + + + + LTK DKLS + K + A ++ TSS Sbjct: 118 ASELDENMIRFLREADLPFVVALTKADKLSRQQQMKQKAALKRQLALGDDA--SMVVTSS 175 Query: 194 VKRKGIEVLRKAILETI 210 K G+E LRK I + + Sbjct: 176 AKGDGMEELRKIIRDAV 192 >gi|238018910|ref|ZP_04599336.1| hypothetical protein VEIDISOL_00770 [Veillonella dispar ATCC 17748] gi|237864394|gb|EEP65684.1| hypothetical protein VEIDISOL_00770 [Veillonella dispar ATCC 17748] Length = 232 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 77/203 (37%), Positives = 107/203 (52%), Gaps = 7/203 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A + + P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+ Sbjct: 29 AAKYNTSCVKADQYPEGDTVEIAFIGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINY 88 Query: 71 FVPK---DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 F + D S + LVD+PGYG+A+ K N + W I Y+ L + LL Sbjct: 89 FDVESKEDISETEERRYHWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLCLL 148 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID RH ID+ + +L + V QIV+TK+DKL+ L K + YPTA P Sbjct: 149 IDGRHPEMPIDKVAYDWLVEAGVPLQIVVTKVDKLTAKEKSANLAIIKEM---YPTATPP 205 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 I SS+K G E+L++ I + + Sbjct: 206 -ILYSSLKHTGRELLQQRINKVL 227 >gi|210630152|ref|ZP_03296267.1| hypothetical protein COLSTE_00151 [Collinsella stercoris DSM 13279] gi|210160625|gb|EEA91596.1| hypothetical protein COLSTE_00151 [Collinsella stercoris DSM 13279] Length = 209 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + +P + PE++F GRSNVGKSS++N L NR++L + S+ PG+T ++NFF Sbjct: 12 FVASYGKASQIPPSTCPEVSFVGRSNVGKSSIMNKLFNRRSLVKVSSTPGKTANVNFF-- 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+A+ K D W LI + + V L+D RH Sbjct: 70 --------EADGVHFVDLPGYGFAQRSKAERDRWARLIGDFFDSERSFNLVVSLVDIRHD 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++D + FL + ++ + LTK DKLS + + + I +I TSS Sbjct: 122 PSKLDLQMIDFLRENGFNFIVCLTKADKLSKSQQAKQAASIRKQI---GVPADRLIVTSS 178 Query: 194 VKRKGIEVLRKAILETI 210 GI+ L++AI++ Sbjct: 179 ESGLGIDKLKQAIVDFC 195 >gi|242054307|ref|XP_002456299.1| hypothetical protein SORBIDRAFT_03g033710 [Sorghum bicolor] gi|241928274|gb|EES01419.1| hypothetical protein SORBIDRAFT_03g033710 [Sorghum bicolor] Length = 312 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 104/204 (50%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P+ G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F Sbjct: 114 FVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKV 173 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA AP++ +W Y R L V+LLID Sbjct: 174 ND---------SWYLVDLPGYGYASAPQEARTNWDEFTRNYFLSRENLVSVFLLIDASIP 224 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 K+ID D S+L + V +V TK DK +E +E + LIR Y A P Sbjct: 225 AKKIDLDYASWLGQNKVPMTLVFTKCDKRKKKKNGGRRPEENVETFQSLIREYFEAAPPW 284 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TSSV +G + + + + NY Sbjct: 285 IMTSSVTNQGRDEILLHMSQLRNY 308 >gi|323464247|gb|ADX76400.1| GTP-binding protein EngB [Staphylococcus pseudintermedius ED99] Length = 198 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L + P+ PE+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNFF Sbjct: 11 LISAVKPEQYPELDLPEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFF--- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 N + VD+PGYGYA+ KK +++G +I Y++ R L+ V L+D RH Sbjct: 68 ------NIDNQLIFVDVPGYGYAKVSKKQREAFGKMIETYITTREALKLVIQLVDLRHPP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++ FL + I+ TK DK+ Q+ ++ K + + ++I SS+ Sbjct: 122 TEDDVLMYDFLKYYDIPTLIIATKEDKIPKGKVQKHIKIIKEKLE--LESGDQIISYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 ++K + + AI I Sbjct: 180 EKKKQDQIWAAISAFI 195 >gi|300113290|ref|YP_003759865.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosococcus watsonii C-113] gi|299539227|gb|ADJ27544.1| ribosome biogenesis GTP-binding protein YsxC [Nitrosococcus watsonii C-113] Length = 200 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 14/204 (6%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 ++++ K+ + + LP E+AF+GRSNVGKSS IN + LARTS PG Sbjct: 2 NSLYRKA--HYQGSAYTLSQLPPDKGMEVAFAGRSNVGKSSAINTITGIGGLARTSKTPG 59 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ +NFF LVD+PGYGYA+ P+ W + YL +R L Sbjct: 60 RTQMINFFQLDARR---------YLVDLPGYGYAKVPEAVKQQWQQTLSAYLEQRRALCG 110 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYP 182 + L++D R + D + ++ + + +I+LTK DKL A + L+K T +L P Sbjct: 111 IVLVVDIRRLYQPFDLQMLAWCRSRELPVRILLTKSDKLKRGAANQALQKATAHLQEVLP 170 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAI 206 TA V S+V R G+E ++ + Sbjct: 171 TA--RVQLFSAVNRMGVEAIQAQL 192 >gi|212637751|ref|YP_002314276.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella piezotolerans WP3] gi|226741186|sp|B8CVL3|ENGB_SHEPW RecName: Full=Probable GTP-binding protein EngB gi|212559235|gb|ACJ31689.1| GTP-binding protein EngB [Shewanella piezotolerans WP3] Length = 224 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 103/212 (48%), Gaps = 17/212 (8%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 S F K+ FL P+I L P EIAF+GRSN GKSS +N+L +K +ART Sbjct: 4 SRIDFRKAE--FLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQK-IART 60 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F LVD+PGYG+A+ P W + YL +R Sbjct: 61 SKTPGRTQLINVFKLDKHR---------RLVDLPGYGFAQVPLALKKKWQQALGEYLLKR 111 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 L V +L+D RH +K +D + + + + +LTK DKL + + + + + + Sbjct: 112 ECLSGVVVLMDIRHPLKDLDMQMIEWAVESDIPVLALLTKADKLGQSARMKMVNEVRKKL 171 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 N+ A +V SS+K G + + + Sbjct: 172 SNFDDA-VKVEAFSSLKGIGKGKVLGILDQWC 202 >gi|221487174|gb|EEE25420.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 1466 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 7/194 (3%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 R LP PEIAF+GRSNVGKSSL+N L R+ + ++ PG TQ L+FF Sbjct: 442 RTALREEELPPPTLPEIAFAGRSNVGKSSLLNELAGRRLTSLVTSRPGTTQQLHFF---- 497 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + P + LVD+PGYG+A+A W + YL R LR V++L+D RHG+K Sbjct: 498 ---KAGSPPVLCLVDLPGYGFAKAAAATRLQWTEFSLYYLKTRKNLRRVFVLVDARHGLK 554 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D+++ FL + VS+QIVLTK D + P +TL K + + + I S+++ Sbjct: 555 ESDKEMLHFLHRWGVSWQIVLTKADLVKPKDLVKTLMLVKEDAKAFRHQAADPIAVSALR 614 Query: 196 RKGIEVLRKAILET 209 + ++VLR+ + E Sbjct: 615 HQALDVLRREMDEL 628 >gi|237831355|ref|XP_002364975.1| GTP-binding conserved hypothetical domain-containing protein [Toxoplasma gondii ME49] gi|211962639|gb|EEA97834.1| GTP-binding conserved hypothetical domain-containing protein [Toxoplasma gondii ME49] gi|221506860|gb|EEE32477.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 1466 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 7/194 (3%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 R LP PEIAF+GRSNVGKSSL+N L R+ + ++ PG TQ L+FF Sbjct: 442 RTALREEELPPPTLPEIAFAGRSNVGKSSLLNELAGRRLTSLVTSRPGTTQQLHFF---- 497 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + P + LVD+PGYG+A+A W + YL R LR V++L+D RHG+K Sbjct: 498 ---KAGSPPVLCLVDLPGYGFAKAAAATRLQWTEFSLYYLKTRKNLRRVFVLVDARHGLK 554 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D+++ FL + VS+QIVLTK D + P +TL K + + + I S+++ Sbjct: 555 ESDKEMLHFLHRWGVSWQIVLTKADLVKPKDLVKTLMLVKEDAKAFRHQAADPIAVSALR 614 Query: 196 RKGIEVLRKAILET 209 + ++VLR+ + E Sbjct: 615 HQALDVLRREMDEL 628 >gi|116494828|ref|YP_806562.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei ATCC 334] gi|191638335|ref|YP_001987501.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei BL23] gi|239631580|ref|ZP_04674611.1| GTPase EngB [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066389|ref|YP_003788412.1| putative GTPase [Lactobacillus casei str. Zhang] gi|122263754|sp|Q039K2|ENGB_LACC3 RecName: Full=Probable GTP-binding protein EngB gi|238693035|sp|B3WE42|ENGB_LACCB RecName: Full=Probable GTP-binding protein EngB gi|116104978|gb|ABJ70120.1| Predicted GTPase [Lactobacillus casei ATCC 334] gi|190712637|emb|CAQ66643.1| Probable GTP-binding protein engB [Lactobacillus casei BL23] gi|239526045|gb|EEQ65046.1| GTPase EngB [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438796|gb|ADK18562.1| Predicted GTPase [Lactobacillus casei str. Zhang] gi|327382363|gb|AEA53839.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei LC2W] gi|327385563|gb|AEA57037.1| Ribosome biogenesis GTP-binding protein YsxC [Lactobacillus casei BD-II] Length = 198 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 96/194 (49%), Gaps = 11/194 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+ G PEIAF GRSNVGKSSLIN L+ RK +ARTS PG+TQ LNF+ Sbjct: 10 ISAVAAAQYPEDGHPEIAFLGRSNVGKSSLINKLIQRKAMARTSGVPGKTQTLNFYDLDS 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ K + +I YL+ R LR V LL+D RH Sbjct: 70 R---------LFFVDVPGYGYAKVSKTARAKFAAMIETYLTTRQPLRGVVLLVDSRHEPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D ++ +L + +V TKIDK + ++ K + +VI S+ Sbjct: 121 ADDISMYQYLKYYQLRTLVVATKIDKTPKSKRLHVAKQIKQRLD--LNQTDDVILFSATT 178 Query: 196 RKGIEVLRKAILET 209 +G E + + +T Sbjct: 179 GEGYEAVWSWLEQT 192 >gi|284047886|ref|YP_003398225.1| ribosome biogenesis GTP-binding protein YsxC [Acidaminococcus fermentans DSM 20731] gi|283952107|gb|ADB46910.1| ribosome biogenesis GTP-binding protein YsxC [Acidaminococcus fermentans DSM 20731] Length = 209 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 5/199 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ + P+ E+AF GRSNVGKSSL+N L RK LAR S++PG+TQ +NF+ Sbjct: 13 YVASAVKATQYPQDTIDEVAFIGRSNVGKSSLLNSLARRKGLARVSSSPGKTQTINFYSF 72 Query: 74 KDFSNLKNN--LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + L++ VD+PGYG+AR K N + W I +Y+ L+ V +L+D R Sbjct: 73 QAKRQLEDEPERHTYYAVDLPGYGFARTSKGNKEQWSAFICKYMENSQYLKLVCVLMDIR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 H + D D + +L + ++LTK DKLS K + + +++ Sbjct: 133 HAPMESDIDCYQWLLNLGLPIMVILTKSDKLSKGAVASQKALYK---KTFGLRDEQIMTY 189 Query: 192 SSVKRKGIEVLRKAILETI 210 SS + L I+E + Sbjct: 190 SSTSHTTRKELINRIMEHL 208 >gi|254373002|ref|ZP_04988491.1| ATP/GTP-binding protein [Francisella tularensis subsp. novicida GA99-3549] gi|254374451|ref|ZP_04989933.1| hypothetical protein FTDG_00620 [Francisella novicida GA99-3548] gi|151570729|gb|EDN36383.1| ATP/GTP-binding protein [Francisella novicida GA99-3549] gi|151572171|gb|EDN37825.1| hypothetical protein FTDG_00620 [Francisella novicida GA99-3548] Length = 197 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 S ++ G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 1 MNYSKAKYIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D + LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLFDLGDNN---------RLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K+ D + ++ I+LTK DKL+ + + ++ + + Sbjct: 112 LVDSRHELKEFDSLMIEMAISFDLNLHILLTKADKLNNKERAQANRMIESFLKTFVSTDK 171 Query: 187 -EVIPTSSVKRKGIEVLRKAI 206 SS+ + G++ ++ + Sbjct: 172 ISYQLFSSLTKMGLDKFKEKL 192 >gi|110598119|ref|ZP_01386397.1| GTP-binding [Chlorobium ferrooxidans DSM 13031] gi|110340251|gb|EAT58748.1| GTP-binding [Chlorobium ferrooxidans DSM 13031] Length = 202 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP+ PEI F+GRSNVGKS+L+N L K LA+TS+ PG+T+ +N+F+ Sbjct: 18 FHISVSALSGLPEESTPEIVFAGRSNVGKSTLLNSLTGLKALAKTSSTPGKTRLINYFLI 77 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 VD+PGYGYA ++ +WG L+ Y+ ER ++ V LL D RH Sbjct: 78 NQ---------EFYFVDLPGYGYAAVGQEQKAAWGHLLSSYIEERQSISLVVLLFDSRHP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + +FL+ Y IVLTK DKL+ Q+ + KT+ ++ + ++ SS Sbjct: 129 AMESDRAMINFLEFHERPYGIVLTKFDKLT----QKEMAKTRRIMESCAAKAKFIVNYSS 184 Query: 194 VKRKGIEVLRKAILETI 210 KG L + I Sbjct: 185 FSGKGKSELLAHLDHYI 201 >gi|328676015|gb|AEB28690.1| GTP-binding protein EngB [Francisella cf. novicida 3523] Length = 197 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 S ++ G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 1 MNYSKAKYIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLFDLGDNK---------RLVDLPGYGYAKVSETIKRQWQSEMENYLTSRKCLNGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K+ D + ++ I+LTK DKL+ + + ++ + + Sbjct: 112 LVDSRHELKEFDSLMIEMAISFGLNLHILLTKADKLNNKERAQANRMIESFLKTFISTDK 171 Query: 187 -EVIPTSSVKRKGIEVLRKAI 206 SS+ + G++ ++ + Sbjct: 172 ISYQLFSSLTKMGLDKFKEKL 192 >gi|331270301|ref|YP_004396793.1| HSR1-like GTP-binding protein [Clostridium botulinum BKT015925] gi|329126851|gb|AEB76796.1| GTP-binding protein, HSR1-related protein [Clostridium botulinum BKT015925] Length = 197 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 11/185 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P E+AF GRSN GKS+LIN + NRK LA+TS+ PG+T+ +NFF+ Sbjct: 8 FIISAVKPDQYPIDNRIEMAFVGRSNAGKSTLINTITNRKKLAKTSSTPGKTRLINFFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+A+ K WG ++ YL R L+ + LL+D RH Sbjct: 68 NN---------DFYFVDLPGYGFAKVSKSEQQKWGSMMETYLVNRPQLKKIVLLVDSRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ ++ IV TK DKL Q+ + + + + S+ Sbjct: 119 PTKDDVQMYEWIKYYGYEAIIVATKSDKLKKNDFQKNKKIIRETLNIRDE--DKFTFFSA 176 Query: 194 VKRKG 198 + + G Sbjct: 177 LNKSG 181 >gi|118602244|ref|YP_903459.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166225977|sp|A1AVN1|ENGB_RUTMC RecName: Full=Probable GTP-binding protein EngB gi|118567183|gb|ABL01988.1| cell division checkpoint GTPase YihA [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 199 Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 102/199 (51%), Gaps = 11/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL P + P E+ F+GRSN GKSS+IN L + LA+ S PG+TQH FF Sbjct: 10 FLLSCPSLKGCPPDEGYEVIFAGRSNAGKSSVINTLTLQNKLAKVSRTPGKTQHFVFFEL 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYGYA+ PK+ W I Y ++R LR L++D RH Sbjct: 70 D---------KDRRLVDLPGYGYAKVPKRVKTKWHKDINEYFNKRDCLRGTVLVMDIRHP 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 K DQ V ++ +S QI+LTK DKL A T K I+ YP + +V SS Sbjct: 121 FKLFDQMVLNWCHSINLSTQIILTKSDKLKKGAASNTYLKVHNQIKKYP--YVDVQLFSS 178 Query: 194 VKRKGIEVLRKAILETINY 212 +K++G+E+L + Y Sbjct: 179 LKKQGLEILGARLNTFFGY 197 >gi|167627772|ref|YP_001678272.1| ribosome biogenesis GTP-binding protein YsxC [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189037179|sp|B0TZB8|ENGB_FRAP2 RecName: Full=Probable GTP-binding protein EngB gi|167597773|gb|ABZ87771.1| ATP/GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 197 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 12/201 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 +TK+ ++ G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 3 YTKAK--YIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLFDLGDNK---------RLVDLPGYGYAKVSEAIKKQWQSEMENYLTTRKCLGGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAH 185 L+D RH +K+ D + ++ I+LTK DKL+ + + + ++ + T Sbjct: 112 LVDSRHELKEFDSLMIEMAISFDLNLHILLTKADKLNNKERAQANKMIESFLKTFIRTDK 171 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 SS+ + G++ L++ + Sbjct: 172 ISYQLFSSLSKMGLDKLKEKL 192 >gi|194689944|gb|ACF79056.1| unknown [Zea mays] gi|194693496|gb|ACF80832.1| unknown [Zea mays] gi|195626284|gb|ACG34972.1| GTP-binding protein [Zea mays] gi|223946703|gb|ACN27435.1| unknown [Zea mays] Length = 313 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 104/204 (50%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P+ G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F Sbjct: 115 FVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKV 174 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA AP++ +W Y R L V+LLID Sbjct: 175 ND---------SWYLVDLPGYGYASAPQEARTNWDEFTRNYFLSRENLVSVFLLIDASIP 225 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 K+ID D S+L + V +V TK DK +E +E + LIR Y A P Sbjct: 226 AKKIDLDYASWLGQNKVPMTLVFTKCDKRKKKKNGGRKPEENVETFQGLIREYFEAAPPW 285 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TSSV +G + + + + NY Sbjct: 286 IMTSSVTNQGRDEILLHMSQLRNY 309 >gi|261415550|ref|YP_003249233.1| ribosome biogenesis GTP-binding protein YsxC [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372006|gb|ACX74751.1| ribosome biogenesis GTP-binding protein YsxC [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326689|gb|ADL25890.1| ribosome biogenesis GTP-binding protein YsxC [Fibrobacter succinogenes subsp. succinogenes S85] Length = 217 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 13/205 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 +T + F++ + LP+ P+IAF GRSNVGKSSL+N L+ +K L + S+ PG+T+ Sbjct: 18 YTVRSAKFVKAAVSLKGLPEEHLPQIAFLGRSNVGKSSLMNTLMGQKKLVKISSTPGKTR 77 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNFF D LVD+PG G+A+ D I Y+ + L+ + Sbjct: 78 ELNFFKVND---------EFFLVDLPGVGFAKVNNAKRDQMSDFIREYVEKCKDLKGLIY 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RHG ID + + +V +K DK++ + + L + + Sbjct: 129 LVDIRHGGTPIDIETVESIRATGCPVLVVASKRDKVNQSELAKGLRDIQQRL----DLDQ 184 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 + + SS+K+ G++ L ILE I+ Sbjct: 185 KPLCVSSLKKTGLDELWTEILEAIH 209 >gi|323140765|ref|ZP_08075684.1| ribosome biogenesis GTP-binding protein YsxC [Phascolarctobacterium sp. YIT 12067] gi|322414783|gb|EFY05583.1| ribosome biogenesis GTP-binding protein YsxC [Phascolarctobacterium sp. YIT 12067] Length = 216 Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 103/201 (51%), Gaps = 9/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ P+ E AF GRSNVGKSSLIN L R LAR S+ PG+TQ +NF+ Sbjct: 13 YVASAVRADQYPQPALIEAAFIGRSNVGKSSLINSLCRRNGLARVSSTPGKTQTINFYEL 72 Query: 74 --KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 K ++ + LVD+PGYG+A+ N D W G I +YLS L V LID R Sbjct: 73 EAKRVVEGEDERASFYLVDLPGYGFAKTNHNNKDQWSGFISKYLSGSENLGVVCQLIDIR 132 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA--QETLEKTKYLIRNYPTAHPEVI 189 H D + F++L + Q+VLTK DKLS A Q+ L K + ++ + E+I Sbjct: 133 HKPMDSDMECFNWLRSCGLKVQVVLTKSDKLSKNAAMSQKALFKREMGLKEH-----EII 187 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS + L + I+ + Sbjct: 188 TYSSSQHTMRGELIERIMNAL 208 >gi|241896577|ref|ZP_04783873.1| GTPase [Weissella paramesenteroides ATCC 33313] gi|241870169|gb|EER73920.1| GTPase [Weissella paramesenteroides ATCC 33313] Length = 208 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 12/195 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P G PE+AF GRSNVGKSSL N+L+NRK+ ARTS+ PG+TQ LNF+ Sbjct: 9 VMSAVRESQYPTDGLPEVAFVGRSNVGKSSLTNVLINRKSFARTSSQPGKTQTLNFYKV- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + VD+PGYGYA+ KK + + +I YL +R L+ + L+D RH Sbjct: 68 --------ENQVFFVDVPGYGYAKVSKKAREDFAIMIGEYLRKRVPLKGIVQLVDARHLP 119 Query: 135 KQIDQDVFSFL--DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D +++++L D + +V TK DK+S + K + + + S Sbjct: 120 SREDIEMYNWLISDDIGLPVLVVATKADKISRGKWNKVEADIKRSL-QFNEELSDFEIFS 178 Query: 193 SVKRKGIEVLRKAIL 207 + + G + + + Sbjct: 179 AETKYGKDNIWDWLE 193 >gi|88858645|ref|ZP_01133286.1| GTP-binding protein [Pseudoalteromonas tunicata D2] gi|88818871|gb|EAR28685.1| GTP-binding protein [Pseudoalteromonas tunicata D2] Length = 219 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 11/200 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 SA F+ P+I LP E+AF+GRSN GKSS +N L ++K +A+TS PGRTQ +N Sbjct: 9 SAATFITSAPDISKLPPDTGIEVAFAGRSNAGKSSSLNTLTDKK-IAKTSKTPGRTQLIN 67 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F D M L+D+PGYGYA+ P + W + YL +R +L+ + +L+D Sbjct: 68 AFDLGD---------NMRLIDLPGYGYAKVPIEMKKKWQRSLGEYLEKRKSLKGLVILMD 118 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +K +D+D+ ++ +S ++LTK DK + + + + ++ V Sbjct: 119 IRHPLKDLDKDLINWAVDSNISTLVLLTKADKFKQGKRKSEVLRVRRELKEL-NGDITVH 177 Query: 190 PTSSVKRKGIEVLRKAILET 209 SS+ G+ + K + Sbjct: 178 AFSSLDGIGLVEVAKHLDNW 197 >gi|295695317|ref|YP_003588555.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus tusciae DSM 2912] gi|295410919|gb|ADG05411.1| ribosome biogenesis GTP-binding protein YsxC [Bacillus tusciae DSM 2912] Length = 199 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 94/194 (48%), Gaps = 14/194 (7%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PK G PE A GRSNVGKSSLIN L RK LA TSN PGRT+ LNF+ Sbjct: 11 TAVSPDRFPKDGLPEFALVGRSNVGKSSLINRLAMRKKLAHTSNTPGRTRTLNFYRINSR 70 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYA+ K WG ++ +L+ R +L V +ID RH Sbjct: 71 ---------FYLVDLPGYGYAQVSKSERLRWGAMVENFLAHRESLAGVIHVIDLRHPPTA 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + +L ++ +V TK DK++ + + + + ++ + S+ Sbjct: 122 DDRLMAEWLRAHDLAVLVVATKADKIARSRWESHRRQAEATLQP-----SRCVVFSAETG 176 Query: 197 KGIEVLRKAILETI 210 G + + ++E + Sbjct: 177 AGRDQVWTWVVERL 190 >gi|309388897|gb|ADO76777.1| ribosome biogenesis GTP-binding protein YsxC [Halanaerobium praevalens DSM 2228] Length = 199 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 11/198 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F + V + P+ PE+AFSGRSNVGKSSLIN + +K LARTSN PGRTQ LN Sbjct: 4 NKAEFYKSVYKYEDCPRLQQPEVAFSGRSNVGKSSLINRMTKQKKLARTSNTPGRTQCLN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F D LVD+PGYG+A P+K D W LI YL+ R L V +ID Sbjct: 64 YFNVDD---------KFYLVDLPGYGFANVPQKVKDDWAELIDTYLNYRENLVGVVQIID 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH + D+ + ++L +++ IV TK+DK+S + + + T Sbjct: 115 SRHKPTKDDKLMVNWLQASGLNFLIVATKVDKISNNKRAKQKKLIYQELN--LTKDDNFT 172 Query: 190 PTSSVKRKGIEVLRKAIL 207 SS +G + + K + Sbjct: 173 FFSSQNGEGSKEVYKYLE 190 >gi|302853147|ref|XP_002958090.1| hypothetical protein VOLCADRAFT_69046 [Volvox carteri f. nagariensis] gi|300256558|gb|EFJ40821.1| hypothetical protein VOLCADRAFT_69046 [Volvox carteri f. nagariensis] Length = 214 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 90/196 (45%), Gaps = 11/196 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PE A GRSNVGKSSLIN L LA+ S PG+ +N ++ Sbjct: 18 FIKSSTRVADCPPDKLPEFALIGRSNVGKSSLINSLTRNDKLAKVSKEPGKHHLINHYLI 77 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+A+A K + + W Y ER L V LL+D Sbjct: 78 ND---------SWYLVDLPGYGFAKAGKSSKEEWLKFTKDYFIERENLVSVLLLVDSSVP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 +++D+D ++L + V + IV TKID K + + K L+ P T Sbjct: 129 PQEVDKDCANWLAECEVPFCIVFTKIDNRKRDMPPNAQNIRAFKQLMAEEWEELPRCFET 188 Query: 192 SSVKRKGIEVLRKAIL 207 SS G L + Sbjct: 189 SSRTGAGRSDLLGYVA 204 >gi|304440711|ref|ZP_07400595.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370898|gb|EFM24520.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus duerdenii ATCC BAA-1640] Length = 200 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 109/195 (55%), Gaps = 11/195 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P EIAF+GRSNVGKSS IN ++ RKNLARTS++PG+T+ +NF+ + Sbjct: 12 SVHRDTYPDENLMEIAFAGRSNVGKSSFINSMLGRKNLARTSSSPGKTRTINFYNIDE-- 69 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + LVD+PGYGYA+ K+ SW +I YL R L+ V+LL+D RH + Sbjct: 70 -------KLRLVDLPGYGYAKVSKEEKSSWAKIINEYLESRENLKEVFLLVDIRHDPTKQ 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D ++F F+ + +V TK DK+S + A ++ +++ T + +IP SSV + Sbjct: 123 DIEMFRFIKEAGFVGIVVATKSDKISKSKAITQIKNIAKVLKTENTDY--IIPYSSVDKN 180 Query: 198 GIEVLRKAILETINY 212 ++ + I + + Y Sbjct: 181 MVDEMWMVIKDLLEY 195 >gi|288942607|ref|YP_003444847.1| ribosome biogenesis GTP-binding protein YsxC [Allochromatium vinosum DSM 180] gi|288897979|gb|ADC63815.1| ribosome biogenesis GTP-binding protein YsxC [Allochromatium vinosum DSM 180] Length = 240 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 12/208 (5%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 H ++ + FL ++ P E+AF+GRSN GKSS IN + ++ LARTS PG Sbjct: 34 HALYQGA--RFLTAATKLQQTPADEGREVAFAGRSNAGKSSAINAICHQNALARTSKTPG 91 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 RTQ L FF + LVD+PGYGYA+ P++ W + YL R +L Sbjct: 92 RTQQLIFFELDE---------TRRLVDLPGYGYAKVPERIKLEWQRHLSHYLESRQSLVG 142 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 + +++D RH + D+ + ++ + +S ++LTK DKL A T + + + + Sbjct: 143 LVIVMDIRHPLTDYDRQMLTWGRRAGLSILLLLTKADKLKRGAASATRLAVERAVAD-DS 201 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILETIN 211 EV S+ +R+G+ ++ + ++ Sbjct: 202 GQVEVQLFSAPERQGLAQVQATLDRWLH 229 >gi|257065891|ref|YP_003152147.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus prevotii DSM 20548] gi|256797771|gb|ACV28426.1| GTP-binding protein HSR1-related [Anaerococcus prevotii DSM 20548] Length = 195 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 11/191 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P+ PE+AF GRSNVGKSS IN + RK LA+TS+ PG+T+ +NF+ D Sbjct: 16 EQWPREDLPELAFVGRSNVGKSSFINSFLCRKKLAKTSSVPGKTRTINFYRIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ KK W LI YL +R LR V+LL+D RH +D+ + Sbjct: 70 ---KFRLVDLPGYGYAKVSKKEKAKWDKLINEYLHQREALREVFLLVDIRHEPTALDKQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + ++ TK DK+ + Q+ +++ + + SS + +V Sbjct: 127 YDWIRETGFTGFVIATKFDKIKKSQTQKHIKQIMKKLEIDDEGL--IFAYSSETKHNKDV 184 Query: 202 LRKAILETINY 212 L + + INY Sbjct: 185 LEEQVDVIINY 195 >gi|187476580|ref|YP_784604.1| ribosome biogenesis GTP-binding protein YsxC [Bordetella avium 197N] gi|115421166|emb|CAJ47650.1| probable GTP-binding protein [Bordetella avium 197N] Length = 207 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 70/197 (35%), Positives = 102/197 (51%), Gaps = 4/197 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + LP AG PE+AF GRSN GKSS IN+L N++ LA +S PGRT+ +N F Sbjct: 9 FFVSAARLDQLPPAGAPEVAFVGRSNAGKSSSINVLCNQRRLAFSSKTPGRTRLINMFGL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D L P LVD+PGYGYA + + W ++ YL +RS+L + L+ID R G Sbjct: 69 PD--PLNPQQPLGFLVDLPGYGYASVAHREKEKWADILGGYLRDRSSLVGIVLMIDIRRG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V ++D+ + F+ +LTK DKL T+ + + + + +P S+ Sbjct: 127 VTELDRRLADFIAPTGRPVLALLTKADKLPYGHRVRTVFEVRKQLADIGAL--NTVPFSA 184 Query: 194 VKRKGIEVLRKAILETI 210 +R G+E I I Sbjct: 185 TERIGLEDATAQIENWI 201 >gi|325479728|gb|EGC82818.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus prevotii ACS-065-V-Col13] Length = 195 Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats. Identities = 67/191 (35%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P E+AF GRSNVGKSS IN + RKNLA+TS+ PG+T+ +NF+ + Sbjct: 16 SQWPSEDLVELAFVGRSNVGKSSFINSFLGRKNLAKTSSKPGKTRTINFYRINN------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ KK W LI YL ER LR V+LL+D RH D+ + Sbjct: 70 ---NFRLVDLPGYGYAKVSKKEKAKWDKLINEYLYERDNLREVFLLVDIRHEPTAQDKQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + ++ TK DK+ Q+ + + K + + SS + +V Sbjct: 127 YDWIIESGFTGFVIATKFDKIKKGQIQKHINQIKKKLNIEDEGL--IFAYSSETKHNKDV 184 Query: 202 LRKAILETINY 212 L + + INY Sbjct: 185 LEEQVDVIINY 195 >gi|229816689|ref|ZP_04446977.1| hypothetical protein COLINT_03737 [Collinsella intestinalis DSM 13280] gi|229807741|gb|EEP43555.1| hypothetical protein COLINT_03737 [Collinsella intestinalis DSM 13280] Length = 207 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + +P + PE++F GRSNVGKSS++N L NR+ L + S+ PG+T ++NFF Sbjct: 12 FVASYGKASQIPPSTCPEVSFVGRSNVGKSSIMNKLFNRRGLVKVSSTPGKTANVNFF-- 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+A+ K D W LI + + V L+D RH Sbjct: 70 --------EADGVHFVDLPGYGFAQRSKAERDRWARLIGDFFDSERSFNLVVSLVDIRHD 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++D + FL + ++ + LTK DKLS + + + I +I TSS Sbjct: 122 PSKLDLQMIEFLRENGFNFIVCLTKADKLSKSQQGKQAASIRKQI---GVPADRLIVTSS 178 Query: 194 VKRKGIEVLRKAILETI 210 GI+ L++AI++ Sbjct: 179 ESGLGIDRLKQAIVDFC 195 >gi|241668335|ref|ZP_04755913.1| GTPase EngB [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876868|ref|ZP_05249578.1| ATP/GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842889|gb|EET21303.1| ATP/GTP-binding protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 197 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 12/201 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 +TK+ ++ G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 3 YTKAK--YIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F D LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLFDLGDNK---------RLVDLPGYGYAKVSEAIKKQWQSEMENYLTTRKCLGGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAH 185 L+D RH +K+ D + + I+LTK DKL+ + + + ++ + T Sbjct: 112 LVDSRHELKEFDSLMIEMAISFDLDLHILLTKADKLNNKERAQANKMIESFLKTFIRTDK 171 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 SS+ + G++ L++ + Sbjct: 172 ISYQLFSSLSKMGLDKLKEKL 192 >gi|332653037|ref|ZP_08418782.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcaceae bacterium D16] gi|332518183|gb|EGJ47786.1| ribosome biogenesis GTP-binding protein YsxC [Ruminococcaceae bacterium D16] Length = 211 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 11/201 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + G P++AFSGRSNVGKSS+IN L+NRKN AR APG+T +N Sbjct: 6 QKAEFILSAVAPKFFLRDGLPQVAFSGRSNVGKSSVINRLLNRKNFARVGAAPGKTTQIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F + A LVD+PGYGYA+ K D WG L+ Y ++ + +++D Sbjct: 66 YFKIDN---------AFYLVDLPGYGYAKVSKAERDRWGKLMESYFADPELMTLGVMIVD 116 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D + + + + +V K+DKL + + L+ + + VI Sbjct: 117 SRHKPTADDCTMAQWYREAGCPFVVVANKLDKLKKSQVEPNLQVIRETLE--LGEGDAVI 174 Query: 190 PTSSVKRKGIEVLRKAILETI 210 P S+ K G + L AIL ++ Sbjct: 175 PFSAEKGTGRQELVSAILASV 195 >gi|20807122|ref|NP_622293.1| GTPase [Thermoanaerobacter tengcongensis MB4] gi|254479256|ref|ZP_05092599.1| putative small GTP-binding protein domain protein [Carboxydibrachium pacificum DSM 12653] gi|24418374|sp|Q8RC22|ENGB_THETN RecName: Full=Probable GTP-binding protein EngB gi|20515616|gb|AAM23897.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4] gi|214034794|gb|EEB75525.1| putative small GTP-binding protein domain protein [Carboxydibrachium pacificum DSM 12653] Length = 194 Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 105/197 (53%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ PK P+IA G+SNVGKS+LIN ++ RKNLA+ S+ PG+T+ +NF++ Sbjct: 8 FVGSAFNESQYPKDKIPQIAIVGKSNVGKSTLINTVLGRKNLAKVSSTPGKTRGINFYLV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 A +VD+PGYGYA+ K+ W I +L+ L+ LLID R Sbjct: 68 N---------RAFYIVDLPGYGYAKVSKEMKKQWAYNIETFLNTSKNLKHALLLIDIRRE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + ++ K + + +VLTK DK++ + A + +E R++ + VI S+ Sbjct: 119 PTEDDFMMVNWFSFKNLPFSVVLTKADKVNKSEANKAIENIC---RSFNISSDRVIVFSA 175 Query: 194 VKRKGIEVLRKAILETI 210 V++ GI + + E I Sbjct: 176 VEKTGISEILRIFEEVI 192 >gi|325290591|ref|YP_004266772.1| GTP-binding protein engB [Syntrophobotulus glycolicus DSM 8271] gi|324965992|gb|ADY56771.1| GTP-binding protein engB [Syntrophobotulus glycolicus DSM 8271] Length = 217 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ + P E+A +GRSNVGKSSLIN +NRKN+AR PG+TQ +NFF Sbjct: 8 YIISAVKPEQYPPGVSMELAVAGRSNVGKSSLINKFLNRKNMARVGQTPGKTQAINFFHI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA+ + WG ++ Y +R L V L+D RH Sbjct: 68 ND---------EWYLVDLPGYGYAKVSLEVKARWGRMMQTYFQKRGNLLGVIQLVDIRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + L + + +V TK DKLS + L+ + ++IP S+ Sbjct: 119 PTEDDKTMVKMLRDRGIPMLLVATKADKLSRSRQIVQLKIIAETLG--VEDWKQIIPFSA 176 Query: 194 VKRKGIEVLRKAILETI 210 V G L + + + + Sbjct: 177 VDGTGNRELHEEVDQLL 193 >gi|238855231|ref|ZP_04645550.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 269-3] gi|260664592|ref|ZP_05865444.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii SJ-7A-US] gi|282932475|ref|ZP_06337900.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 208-1] gi|313471946|ref|ZP_07812438.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 1153] gi|238832123|gb|EEQ24441.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 269-3] gi|239529126|gb|EEQ68127.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 1153] gi|260561657|gb|EEX27629.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii SJ-7A-US] gi|281303424|gb|EFA95601.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 208-1] Length = 195 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 103/197 (52%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + P+ PEIA +GRSNVGKSSLIN +NRKNLARTS+ PG+TQ LNF+ Sbjct: 8 YSVSAVREDQYPRDVLPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQTLNFYKV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA+ KK + +G +I YL R+ L + ++ID RH Sbjct: 68 ND---------SFYLVDVPGYGYAKVSKKQREQFGEMIQDYLETRANLEGLIIIIDARHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++++ + +V TK+DKL + + + + + + V+ SS Sbjct: 119 PTTDDIAMYNYALLLDLPILVVTTKMDKLKKSQYNKVQSNLRKHL-DLNHDNVTVLTYSS 177 Query: 194 VKRKGIEVLRKAILETI 210 + + L K I + I Sbjct: 178 ETKLHLAELNKWIEDKI 194 >gi|227535176|ref|ZP_03965225.1| GTPase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187221|gb|EEI67288.1| GTPase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 198 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 68/194 (35%), Positives = 96/194 (49%), Gaps = 11/194 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P+ G PEIAF GRSNVGKSSLIN L+ RK +ARTS PG+TQ LNF+ Sbjct: 10 ISAVAAAQYPEDGHPEIAFLGRSNVGKSSLINKLIQRKAMARTSGVPGKTQTLNFYDLDS 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD+PGYGYA+ K + +I YL+ R LR + LL+D RH Sbjct: 70 R---------LFFVDVPGYGYAKVSKTARAKFAAMIETYLTTRQPLRGIVLLVDSRHEPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D ++ +L + +V TKIDK + ++ K + +VI S+ Sbjct: 121 ADDISMYQYLKYYQLRTLVVATKIDKTPKSKRLHVAKQIKQRLD--LNQTDDVILFSATT 178 Query: 196 RKGIEVLRKAILET 209 +G E + + +T Sbjct: 179 GEGYEAVWSWLEQT 192 >gi|294792179|ref|ZP_06757327.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. 6_1_27] gi|294457409|gb|EFG25771.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. 6_1_27] Length = 232 Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 107/203 (52%), Gaps = 7/203 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A + + P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+ Sbjct: 29 AAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINY 88 Query: 71 FVPK---DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 F + D S+ + LVD+PGYG+A+ K N + W I Y+ L + LL Sbjct: 89 FDIESKEDISDTEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLCLL 148 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID RH ID+ F +L + V QIV+TK DKL+ L K L YPTA P Sbjct: 149 IDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKLTAKEKSANLSIIKEL---YPTATPP 205 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 I SS+K G E+L++ I + + Sbjct: 206 -ILYSSLKHTGRELLQQRINKIL 227 >gi|262039420|ref|ZP_06012727.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia goodfellowii F0264] gi|261746556|gb|EEY34088.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia goodfellowii F0264] Length = 198 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 14/204 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++ P+ E +F GRSNVGKSSLIN L NR+NLARTS PGRTQ +N Sbjct: 4 KKSEFVKSAVYEKDYPEKKGIEFSFIGRSNVGKSSLINSLTNRRNLARTSKTPGRTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F+ + VD+PGYG+A+ P+ +WG I YL + V+LL+D Sbjct: 64 YFLID---------SEIYFVDLPGYGFAKVPEAVKRNWGTTIETYLKSERD-KVVFLLLD 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R D ++ +L+ + Y I+ TK DKLS + L++ K + + +V Sbjct: 114 LRRIPSGEDMEMLRWLEHYNIEYYIIFTKSDKLSNNEKAKQLKEIKKKLE---FNNEDVF 170 Query: 190 PTSSVKRKGIEVLRKAILETI-NY 212 +S++K G E L I E + NY Sbjct: 171 FSSALKNTGKEELLDFIYEKVKNY 194 >gi|329121866|ref|ZP_08250481.1| ribosome biogenesis GTP-binding protein YsxC [Dialister micraerophilus DSM 19965] gi|327467804|gb|EGF13296.1| ribosome biogenesis GTP-binding protein YsxC [Dialister micraerophilus DSM 19965] Length = 213 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 101/199 (50%), Gaps = 6/199 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +++ + EIAF GRSNVGKSSLIN L K LAR S PG+T+ +N++ Sbjct: 17 YVKSAVNAKQYAEDEYVEIAFIGRSNVGKSSLINSLCGNKKLARVSREPGKTRTINYYAV 76 Query: 74 KDFS--NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + N + LVD+PGYG+A+ +KN D W I Y+ + L + LL+D R Sbjct: 77 QSRKAINEEEERQDWYLVDLPGYGFAKTSQKNKDMWSSFISDYIYKSEKLILICLLVDLR 136 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 H +D + +L V QI+ TK DKL ++ L + K + + +P I Sbjct: 137 HPGLAMDMKAYEWLVNSGVDVQIIATKADKLGNNEKRKNLAQVKKI---FQLKNPP-IAY 192 Query: 192 SSVKRKGIEVLRKAILETI 210 SS+K +G + L + I I Sbjct: 193 SSLKNEGRKELLELIENYI 211 >gi|332286111|ref|YP_004418022.1| GTP-binding protein [Pusillimonas sp. T7-7] gi|330430064|gb|AEC21398.1| GTP-binding protein [Pusillimonas sp. T7-7] Length = 207 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 4/197 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + LP E+ F GRSN GKSS IN+L N++ LA +S PGRT+ +N F Sbjct: 9 FTVSAARLDQLPPPTTAEVCFVGRSNSGKSSAINVLTNQRRLAFSSKTPGRTRLINLFGI 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D ++ LVD+PGYGYA ++ + W ++ YL RS+L + +LID R G Sbjct: 69 PD--PVEQGAFLGFLVDLPGYGYASVAREAREEWADVLGGYLRSRSSLAGIVMLIDIRRG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V ++D+ + ++ +LTK DK + + K + + + +P S+ Sbjct: 127 VTELDRRLADWIAPTGTPVLALLTKADKFPYGQRIKAVAAVKKQLADIGALNA--MPFSA 184 Query: 194 VKRKGIEVLRKAILETI 210 R G++ I I Sbjct: 185 THRLGLDTATAQIENWI 201 >gi|326204724|ref|ZP_08194579.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium papyrosolvens DSM 2782] gi|325985095|gb|EGD45936.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium papyrosolvens DSM 2782] Length = 204 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + P G EIAF+GRSNVGKSS+IN LVNRK+LAR + PG+T+ +NFF + Sbjct: 10 ITAVKPNQYPVTGFSEIAFAGRSNVGKSSIINTLVNRKSLARVGSTPGKTRQINFFSVNE 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHG 133 LVD+PGYG+A K+ SW +I YL R L+ V LL+D RH Sbjct: 70 ---------NFYLVDLPGYGFASVSKEMKASWSNIIETYLYSRKENFLKMVVLLVDIRHS 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ +L + I+ K DK++ + + +++ +VIP S+ Sbjct: 121 PSKDDITMYQWLKGFGLKTLIIANKADKITRGQINPRINDIRKVLQ--LDGDEKVIPFST 178 Query: 194 VKRKGIEVLRKAILETIN 211 R G+E + +N Sbjct: 179 SNRLGLEQVWAEFDNVLN 196 >gi|89256263|ref|YP_513625.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. holarctica LVS] gi|115314717|ref|YP_763440.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. holarctica OSU18] gi|118497636|ref|YP_898686.1| GTPase EngB [Francisella tularensis subsp. novicida U112] gi|134302057|ref|YP_001122026.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. tularensis WY96-3418] gi|167011014|ref|ZP_02275945.1| GTPase EngB [Francisella tularensis subsp. holarctica FSC200] gi|169656584|ref|YP_001428389.2| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. holarctica FTNF002-00] gi|187931483|ref|YP_001891467.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. mediasiatica FSC147] gi|195536337|ref|ZP_03079344.1| ATP/GTP-binding protein [Francisella tularensis subsp. novicida FTE] gi|208779438|ref|ZP_03246784.1| ATP/GTP-binding protein [Francisella novicida FTG] gi|254367601|ref|ZP_04983622.1| ATP/GTP-binding protein [Francisella tularensis subsp. holarctica 257] gi|254369249|ref|ZP_04985261.1| hypothetical protein FTAG_00203 [Francisella tularensis subsp. holarctica FSC022] gi|290953603|ref|ZP_06558224.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. holarctica URFT1] gi|295313104|ref|ZP_06803794.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. holarctica URFT1] gi|119369197|sp|Q2A3S7|ENGB_FRATH RecName: Full=Probable GTP-binding protein EngB gi|119369198|sp|Q0BM81|ENGB_FRATO RecName: Full=Probable GTP-binding protein EngB gi|166225954|sp|A0Q6R7|ENGB_FRATN RecName: Full=Probable GTP-binding protein EngB gi|166225955|sp|A4IYA4|ENGB_FRATW RecName: Full=Probable GTP-binding protein EngB gi|172044104|sp|A7NBT0|ENGB_FRATF RecName: Full=Probable GTP-binding protein EngB gi|238691555|sp|B2SG30|ENGB_FRATM RecName: Full=Probable GTP-binding protein EngB gi|89144094|emb|CAJ79345.1| ATP/GTP-binding protein [Francisella tularensis subsp. holarctica LVS] gi|115129616|gb|ABI82803.1| GTPase [Francisella tularensis subsp. holarctica OSU18] gi|118423542|gb|ABK89932.1| ATP/GTP-binding protein [Francisella novicida U112] gi|134049834|gb|ABO46905.1| GTP binding protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134253412|gb|EBA52506.1| ATP/GTP-binding protein [Francisella tularensis subsp. holarctica 257] gi|157122199|gb|EDO66339.1| hypothetical protein FTAG_00203 [Francisella tularensis subsp. holarctica FSC022] gi|164551652|gb|ABU61433.2| GTP-binding protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|187712392|gb|ACD30689.1| ATP/GTP-binding protein [Francisella tularensis subsp. mediasiatica FSC147] gi|194372814|gb|EDX27525.1| ATP/GTP-binding protein [Francisella tularensis subsp. novicida FTE] gi|208745238|gb|EDZ91536.1| ATP/GTP-binding protein [Francisella novicida FTG] gi|332678344|gb|AEE87473.1| GTP-binding protein EngB [Francisella cf. novicida Fx1] Length = 197 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 S ++ G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 1 MNYSKAKYIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F + + LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLFDLGNNN---------RLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K+ D + ++ I+LTK DKL+ + + ++ + + Sbjct: 112 LVDSRHELKEFDSLMIEMAISFDLNLHILLTKADKLNNKERAQANRMIESFLKTFVSTDK 171 Query: 187 -EVIPTSSVKRKGIEVLRKAI 206 SS+ + G++ ++ + Sbjct: 172 ISYQLFSSLTKMGLDKFKEKL 192 >gi|156100483|ref|XP_001615969.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148804843|gb|EDL46242.1| hypothetical protein, conserved [Plasmodium vivax] Length = 988 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 105/201 (52%), Gaps = 7/201 (3%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K I + ++ LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ + Sbjct: 113 KPRMILYKTAIQVSELPLPKYPEIAFIGRSNCGKSTLINELCGRTNKAKVSKLPGCTKEI 172 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 +F+ L LVD+PGYG+A + ++ W + YL R L+ V++LI Sbjct: 173 HFYKIAKPCLL-------CLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRKNLKKVFVLI 225 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 DCR G+K D+++ F D+ + YQIVL+K D L+ ++ I + + Sbjct: 226 DCRIGLKTSDKELLHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIANEEIACFKNLEAPI 285 Query: 189 IPTSSVKRKGIEVLRKAILET 209 IP SS+KR+ + LR+ I Sbjct: 286 IPLSSLKRQNLNELRREIARY 306 >gi|293376040|ref|ZP_06622293.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter sanguinis PC909] gi|325844606|ref|ZP_08168249.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter sp. HGF1] gi|292645341|gb|EFF63398.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter sanguinis PC909] gi|325489031|gb|EGC91418.1| ribosome biogenesis GTP-binding protein YsxC [Turicibacter sp. HGF1] Length = 208 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 11/200 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 +++ + P G PE+ F+GRSNVGKSS IN L NRK+LAR S+ PG+TQ LNF Sbjct: 5 KAEYIKSCVKAEHYPTDGLPEMIFAGRSNVGKSSFINSLTNRKHLARVSSRPGKTQTLNF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + D M LVD+PGYGYA+ + +S+G +I YL ER L LL+D Sbjct: 65 YNINDM---------MYLVDVPGYGYAKVNRSLKESFGRMIEEYLVERDELILGVLLVDY 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH D ++ + ++ TK DK++ + ++ + K + + Sbjct: 116 RHKPTAEDIAMYQLYKYYEIPSVVIGTKKDKVNRSQYKKQEKLIKETLG--FDQDDVFVA 173 Query: 191 TSSVKRKGIEVLRKAILETI 210 SS +G + + + L+ I Sbjct: 174 YSSETHEGRDEVWEIFLDLI 193 >gi|294794044|ref|ZP_06759181.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. 3_1_44] gi|294455614|gb|EFG23986.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella sp. 3_1_44] Length = 232 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 106/203 (52%), Gaps = 7/203 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A + + P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+ Sbjct: 29 AAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINY 88 Query: 71 FVPK---DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 F + D S + LVD+PGYG+A+ K N + W I Y+ L + LL Sbjct: 89 FDIESKEDISETEECRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLCLL 148 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID RH ID+ F +L + V QIV+TK DKL+ L K L YPTA P Sbjct: 149 IDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKLTAKEKSANLSIIKEL---YPTATPP 205 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 I SS+K G E+L++ I + + Sbjct: 206 -ILYSSLKHTGRELLQQRINKIL 227 >gi|325295391|ref|YP_004281905.1| GTP-binding protein engB [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065839|gb|ADY73846.1| GTP-binding protein engB [Desulfurobacterium thermolithotrophum DSM 11699] Length = 194 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 110/195 (56%), Gaps = 12/195 (6%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + V LP+ E+AF GRSNVGKSSL+N LVN +A+ S+ PG+T+ +NF++ D Sbjct: 10 KTVYAPEELPQTPYKEVAFVGRSNVGKSSLLNTLVNNYKIAKVSSEPGKTRSVNFYLIND 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 +VD+PGYG+A+ P K W LI +YL ER TL+ V+LL+D + G Sbjct: 70 ---------KFFMVDLPGYGFAKVPFKEQKRWRDLIEKYLKERDTLKGVFLLVDSKVGPT 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D+ + +LD + Y +V TK+DKL + Q+ K + +++ E+IP SS Sbjct: 121 EKDKQMKDWLDFFGIPYVVVATKVDKLKSSEKQKLKRKVEEGLKDKNL---EIIPFSSKT 177 Query: 196 RKGIEVLRKAILETI 210 R+G + K I + Sbjct: 178 REGRVEVLKRIERLL 192 >gi|157959931|ref|YP_001499965.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella pealeana ATCC 700345] gi|189037190|sp|A8GYP3|ENGB_SHEPA RecName: Full=Probable GTP-binding protein EngB gi|157844931|gb|ABV85430.1| GTP-binding protein HSR1-related [Shewanella pealeana ATCC 700345] Length = 225 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 103/212 (48%), Gaps = 17/212 (8%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 SH F K+ FL P+I L P EIAF+GRSN GKSS +N+L +K +ART Sbjct: 4 SHIDFRKAE--FLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQK-IART 60 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F LVD+PGYG+A+ P W + YL +R Sbjct: 61 SKTPGRTQLINVFRLDKHR---------RLVDLPGYGFAQVPLALKLKWQESLGEYLLKR 111 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 L V +L+D RH +K +D + + + + +LTK DKL + + + + + + Sbjct: 112 DCLSGVVVLMDIRHPLKDLDMQMIEWAVESHIPVLALLTKADKLGQSARMKMVNEVRKKL 171 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++ +V P SS+K G + + Sbjct: 172 SHFEDG-VKVEPFSSLKGIGKGKVLGILDSWC 202 >gi|313891565|ref|ZP_07825175.1| ribosome biogenesis GTP-binding protein YsxC [Dialister microaerophilus UPII 345-E] gi|313120024|gb|EFR43206.1| ribosome biogenesis GTP-binding protein YsxC [Dialister microaerophilus UPII 345-E] Length = 213 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 101/199 (50%), Gaps = 6/199 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +++ + EIAF GRSNVGKSSLIN L K LAR S PG+T+ +N++ Sbjct: 17 YVKSAVNAKQYVEDEYVEIAFIGRSNVGKSSLINSLCGNKKLARVSREPGKTRTINYYAV 76 Query: 74 KDFS--NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + N K LVD+PGYG+A+ +KN D W I Y+ + L + LL+D R Sbjct: 77 QSRKAINEKEERQDWYLVDLPGYGFAKTSQKNKDMWSSFISDYIYKSEKLILICLLVDLR 136 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 H +D + +L V QI+ TK DKL ++ L + K + + +P I Sbjct: 137 HPGLAMDMKAYEWLVNSGVDVQIIATKADKLGNNEKRKNLAQVKKI---FQLKNPP-IAY 192 Query: 192 SSVKRKGIEVLRKAILETI 210 SS+K +G + L + I I Sbjct: 193 SSLKNEGRKELLELIENYI 211 >gi|168056123|ref|XP_001780071.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668474|gb|EDQ55080.1| predicted protein [Physcomitrella patens subsp. patens] Length = 305 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 109/208 (52%), Gaps = 10/208 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + T+F K F LP PEIAF+GRSNVGKSSLIN L + + RTS+ Sbjct: 100 IQETVF-KRKLTFAAAAKVSRSLPSLNLPEIAFAGRSNVGKSSLINALTRQWGVVRTSDK 158 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF + LVD+PGYG+A A ++ ++W L+ Y++ R L Sbjct: 159 PGMTQSVNFFTLGSR---------LCLVDLPGYGFAYAKEEAKEAWEDLVKEYVTTRKIL 209 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V LL+D + G+K D+++ ++ YQIVLTK D L P + + ++++ Sbjct: 210 KRVCLLVDSKWGLKPRDEELIELMENAQTKYQIVLTKTDILPPLDLARRATQIQEALKHH 269 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILET 209 V+ SS GI LRKA++ Sbjct: 270 KQLILPVLMVSSQTGGGIPHLRKALVNL 297 >gi|258591281|emb|CBE67578.1| putative GTP-binding protein engB [NC10 bacterium 'Dutch sediment'] Length = 230 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 103/199 (51%), Gaps = 11/199 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ V + LP+ EIA GRSNVGKSSLIN L+ R+ LAR S PGRTQ LNF Sbjct: 14 SAEFVTSVSSLAQLPREPRAEIAVVGRSNVGKSSLINCLLRRRGLARVSGVPGRTQLLNF 73 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ LVD+PGYGYA+ P +WG LI YL+ LR V +LID Sbjct: 74 FLIN---------RDFYLVDLPGYGYAKVPDSIRLAWGPLIEGYLASDRDLRVVIVLIDA 124 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R GV + D + LD ++++ VLTKIDKL T Q + + +IP Sbjct: 125 RQGVTEKDLQMKGLLDNFSINWIPVLTKIDKLRRTARQAHIRDAVDALGLRDPRA--IIP 182 Query: 191 TSSVKRKGIEVLRKAILET 209 S+ +G E L I + Sbjct: 183 FSAKSEEGRESLLAVIGDY 201 >gi|310822303|ref|YP_003954661.1| GTP-binding protein, EngB-like protein [Stigmatella aurantiaca DW4/3-1] gi|309395375|gb|ADO72834.1| GTP-binding protein, EngB-like protein [Stigmatella aurantiaca DW4/3-1] Length = 206 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 97/194 (50%), Gaps = 5/194 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E P E+AF GRSNVGKSS+IN L RK L R SN PGRT+ LNFF Sbjct: 9 FVITATEPKGYPSGHSAEVAFVGRSNVGKSSMINTLTGRKKLVRVSNTPGRTRTLNFFDV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + + L D+PGYG+A+A K + W +I YL +R L V +ID G Sbjct: 69 ELDRDGH--RHQVRLADLPGYGFAKASKADRVQWNEMITTYLDKRHRLEAVVSIIDAEIG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D +L +K +V TKID+L+ + ++ + A VI SS Sbjct: 127 PTPDDLQTLDYLQEKDRRVLVVATKIDRLAKARRKPRIQALAQQLDLPLEA---VIAFSS 183 Query: 194 VKRKGIEVLRKAIL 207 V + G++ + A+L Sbjct: 184 VDKIGVDEVWNALL 197 >gi|218658399|ref|ZP_03514329.1| GTPase EngB [Rhizobium etli IE4771] Length = 173 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 87/146 (59%), Positives = 107/146 (73%), Gaps = 1/146 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN P Sbjct: 5 EKPLF-GHPWIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTP 63 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRTQ LN+FVP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+TL+ Sbjct: 64 GRTQELNYFVPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRATLK 123 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKK 148 VY+LID RHG+K+ D+DV + LDK Sbjct: 124 RVYVLIDSRHGIKKNDEDVLTLLDKA 149 >gi|299529616|ref|ZP_07043053.1| ribosome biogenesis GTP-binding protein YsxC [Comamonas testosteroni S44] gi|298722479|gb|EFI63399.1| ribosome biogenesis GTP-binding protein YsxC [Comamonas testosteroni S44] Length = 241 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F ++ LPK PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 12 HTARFFTTAAQLNQLPKVDVPEIAFVGRSNAGKSTAINTLTQQKQLAFASKKPGRTQHIN 71 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K + L D+PGYGYA + + + W +++ YL R +L V LL D Sbjct: 72 LFALG-----KQGVTDAVLADLPGYGYAAVSRTDKERWQRVMLNYLMSRESLSAVVLLCD 126 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + ++ + + IVLTK DKL+ + L TK Sbjct: 127 PRLGLTELDEALLDAIRPRVEQGLKFLIVLTKADKLTRAEQAKILSITK-----LNAGGG 181 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 EV S++K++G++ + + + + Sbjct: 182 EVRLFSALKKQGVDDVAQLLWHWCH 206 >gi|221069072|ref|ZP_03545177.1| GTP-binding protein HSR1-related [Comamonas testosteroni KF-1] gi|220714095|gb|EED69463.1| GTP-binding protein HSR1-related [Comamonas testosteroni KF-1] Length = 265 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F ++ LPK PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 36 HTARFFTTAAQLNQLPKVDVPEIAFVGRSNAGKSTAINTLTQQKQLAFASKKPGRTQHIN 95 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K + L D+PGYGYA + + + W +++ YL R +L V LL D Sbjct: 96 LFALG-----KQGVTDAVLADLPGYGYAAVSRTDKERWQRVMLNYLMSRESLSAVVLLCD 150 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + ++ + + IVLTK DKL+ + L TK Sbjct: 151 PRLGLTELDEALLDAIRPRVEQGLKFLIVLTKADKLTRAEQAKILSITK-----LNAGGG 205 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 EV S++K++G++ + + + + Sbjct: 206 EVRLFSALKKQGVDDVAQLLWHWCH 230 >gi|317495275|ref|ZP_07953645.1| ribosome biogenesis GTP-binding protein YsxC [Gemella moribillum M424] gi|316914697|gb|EFV36173.1| ribosome biogenesis GTP-binding protein YsxC [Gemella moribillum M424] Length = 198 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PE+A GRSNVGKSS IN ++ RKN AR S PG+T+ LNFF Sbjct: 12 LISAVSKKQYPEHTKPEVAMCGRSNVGKSSFINTILERKNYARVSAKPGKTRTLNFFDIN 71 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + LVD+PGYGYA+ K + +IV Y + L V LID RH Sbjct: 72 D---------KVVLVDVPGYGYAKLSKSEKEKLYDMIVEYFTTSKNLGFVLHLIDSRHKP 122 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL+ + + +VLTKIDK+S + K + + VIP SSV Sbjct: 123 SQDDIEMNEFLNYYEIPFVVVLTKIDKISKNELAKNTAIIKRELDLTNSMA--VIPFSSV 180 Query: 195 KRKGIEVLRKAILETI 210 + G + + K I + + Sbjct: 181 TKLGKDKVLKEIEKVL 196 >gi|242373965|ref|ZP_04819539.1| GTPase [Staphylococcus epidermidis M23864:W1] gi|242348319|gb|EES39921.1| GTPase [Staphylococcus epidermidis M23864:W1] Length = 195 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNFF Sbjct: 11 IISAVQKSQYPETEMAEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G +I YL++R L+ V L+D RH Sbjct: 71 E---------QLIFVDVPGYGYAKVSKVQREKFGKMIEEYLTQRENLQLVIQLVDLRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++++L + ++ TK DK++ Q+ ++ K + P E+I SS+ Sbjct: 122 TEDDVLMYNYLKHFDIPTLVICTKEDKIAKGKVQKHIKNIKEKLDLEPE--DEIISYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 K + + I + Sbjct: 180 KNSNQQQVWDIIASYL 195 >gi|159477681|ref|XP_001696937.1| hypothetical protein CHLREDRAFT_105231 [Chlamydomonas reinhardtii] gi|158274849|gb|EDP00629.1| predicted protein [Chlamydomonas reinhardtii] Length = 214 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 92/203 (45%), Gaps = 18/203 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PE AF GRSNVGKSSLIN L N LA+ S PG T+ +N ++ Sbjct: 9 FIKSSTRVADCPPDRIPEFAFIGRSNVGKSSLINSLTNNDRLAKVSKEPGMTKLINHYLI 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYG+A+A K N + W Y R L V LL+D Sbjct: 69 ND---------SWYLVDLPGYGFAKAGKSNREEWLRFTKDYFITRDNLVSVMLLVDSSLP 119 Query: 134 VKQ-------IDQDVFSFLDKKAVSYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTA 184 + +D+D +L + V + IV TKID K T ++ K ++ A Sbjct: 120 PQASGPGWRTVDRDCADWLAECEVPFCIVFTKIDNRKKDMPTNAANVKAFKQMMAEEWEA 179 Query: 185 HPEVIPTSSVKRKGIEVLRKAIL 207 P TSS G L + Sbjct: 180 LPRCFETSSKTGTGKSELLGYLA 202 >gi|307111038|gb|EFN59273.1| hypothetical protein CHLNCDRAFT_17068 [Chlorella variabilis] Length = 205 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 97/205 (47%), Gaps = 13/205 (6%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 KSA F++ + P A PE A GRSNVGKSSLIN+L R LA S PG+T+ Sbjct: 5 VKSA-EFVKSSTSVEQCPPARYPEFAVIGRSNVGKSSLINMLTGRNALAMVSKTPGKTRL 63 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +N F+ A LVD+PGYGYARA K +V W Y ER TL V LL Sbjct: 64 INHFLIN---------GAWFLVDLPGYGYARASKGSVVEWNRFTREYFVERETLVTVLLL 114 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAH 185 +D +D ++ + + + +V TK+DK + + + + + + + Sbjct: 115 VDSSIPPMPLDISCAAWFAEAGIPFTVVFTKLDKRKKGASPSDDNIAAFEQVWLGWACGY 174 Query: 186 -PEVIPTSSVKRKGIEVLRKAILET 209 P + TSS KG L + + Sbjct: 175 APPTVLTSSKSGKGRSELLAHVAQL 199 >gi|256850971|ref|ZP_05556360.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 27-2-CHN] gi|260661185|ref|ZP_05862099.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 115-3-CHN] gi|282934114|ref|ZP_06339392.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 208-1] gi|256616033|gb|EEU21221.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 27-2-CHN] gi|260548122|gb|EEX24098.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 115-3-CHN] gi|281301728|gb|EFA93994.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii 208-1] Length = 196 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + P+ PEIA +GRSNVGKSSLIN +NRKNLARTS+ PG+TQ LNF+ Sbjct: 8 YSVSAVREDQYPRDILPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQTLNFYKV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYAR K + +G +I YL R L + ++ID RH Sbjct: 68 NN---------SFYLVDVPGYGYARVSKAQREQFGEMIQDYLETRGNLEGLIIIIDARHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++++ + +V TK+DK+ + + + + + + V+ SS Sbjct: 119 PTVDDIAMYNYALLLDLPILVVATKMDKIKKSQYNKVFSNLRKHL-DLDHDNVSVLTYSS 177 Query: 194 VKRKGIEVLRKAILETI 210 + + L K I + I Sbjct: 178 ESKLHLAELNKWIEDKI 194 >gi|167626126|ref|YP_001676420.1| ribosome biogenesis GTP-binding protein YsxC [Shewanella halifaxensis HAW-EB4] gi|189037189|sp|B0TNM9|ENGB_SHEHH RecName: Full=Probable GTP-binding protein EngB gi|167356148|gb|ABZ78761.1| GTP-binding protein HSR1-related [Shewanella halifaxensis HAW-EB4] Length = 226 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 103/212 (48%), Gaps = 17/212 (8%) Query: 3 SHTIFTKSAWIFLRGVPEIGLL----PKAGPPEIAFSGRSNVGKSSLINILVNRKNLART 58 S F K+ FL P+I L P EIAF+GRSN GKSS +N+L +K +ART Sbjct: 4 SRIDFRKAE--FLISAPDIAHLNEYLPGDVGVEIAFAGRSNAGKSSALNLLTEQK-IART 60 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S PGRTQ +N F LVD+PGYG+A+ P W + YL +R Sbjct: 61 SKTPGRTQLINVFKLDKHR---------RLVDLPGYGFAQVPLALKLKWQQALGEYLLKR 111 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 L V +L+D RH +K +D + + + + +LTK DKL + + + + + + Sbjct: 112 DCLSGVVVLMDIRHPLKDLDMQMIEWAVESHIPVLALLTKADKLGQSDRMKMVNEVRKKL 171 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 N+ A +V P SS+K G + + Sbjct: 172 SNFDDA-VKVEPFSSLKGIGKSKVLSILDGWC 202 >gi|282883087|ref|ZP_06291687.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus lacrimalis 315-B] gi|281297064|gb|EFA89560.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus lacrimalis 315-B] Length = 198 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 11/195 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PE AF+GRSNVGKSS IN ++ RKNLARTS+ PG+T+ +NF+ D Sbjct: 12 AVKKETYPANNLPEFAFAGRSNVGKSSFINAMLGRKNLARTSSTPGKTRTINFYKVND-- 69 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + LVD+PGYGYA+ KK DSW +I YL R L LL+D RH Q+ Sbjct: 70 -------DLRLVDLPGYGYAKVSKKEKDSWANIINEYLETRENLLETILLVDIRHDPTQL 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D ++ +L S ++ TK DK+S ++ ++ ++ ++ +IP SSV + Sbjct: 123 DIQMYDYLLASGFSGIVIATKKDKISKSSVKKNIDNIARKLK--APVKENIIPFSSVDKD 180 Query: 198 GIEVLRKAILETINY 212 ++ L + I + Sbjct: 181 EVDELWYIFEDIIKF 195 >gi|264676794|ref|YP_003276700.1| ferrous iron transporter B [Comamonas testosteroni CNB-2] gi|262207306|gb|ACY31404.1| ferrous iron transport protein B [Comamonas testosteroni CNB-2] Length = 231 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 13/205 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F ++ LPK PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 12 HTARFFTTAAQLNQLPKVEVPEIAFVGRSNAGKSTAINTLTQQKQLAFASKKPGRTQHIN 71 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K + L D+PGYGYA + + + W +++ YL R +L V LL D Sbjct: 72 LFALG-----KQGVTDAVLADLPGYGYAAVSRTDKERWQRVMLNYLMSRESLSAVVLLCD 126 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + ++ + + IVLTK DKL+ + L TK Sbjct: 127 PRLGLTELDEALLDAIRPRVEQGLKFLIVLTKADKLTRAEQAKILSITK-----LNAGGG 181 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 EV S++K++G++ + + + + Sbjct: 182 EVRLFSALKKQGVDDVAQLLWHWCH 206 >gi|269798315|ref|YP_003312215.1| GTP-binding protein HSR1-related protein [Veillonella parvula DSM 2008] gi|269094944|gb|ACZ24935.1| GTP-binding protein HSR1-related protein [Veillonella parvula DSM 2008] Length = 232 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 106/203 (52%), Gaps = 7/203 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A + + P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+ Sbjct: 29 AAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINY 88 Query: 71 FVPK---DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 F + D S + LVD+PGYG+A+ K N + W I Y+ L + LL Sbjct: 89 FDIESKEDISETEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLCLL 148 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID RH ID+ F +L + V QIV+TK DKL+ L K L YPTA P Sbjct: 149 IDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKLTAKEKSVNLSIIKEL---YPTATPP 205 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 I SS+K G E+L++ I + + Sbjct: 206 -ILYSSLKHTGRELLQQRINKIL 227 >gi|227486250|ref|ZP_03916566.1| GTPase [Anaerococcus lactolyticus ATCC 51172] gi|227235661|gb|EEI85676.1| GTPase [Anaerococcus lactolyticus ATCC 51172] Length = 195 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 PK PEIAF GRSNVGKSS IN NRK +A+ S+ PG+T+ +NF+ D Sbjct: 16 AQWPKDALPEIAFVGRSNVGKSSFINSFSNRKAIAKISSKPGKTRTINFYRAND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYG+A+ K W LI YL +R L+ V+L++D RH D+ + Sbjct: 70 ---TFRLVDLPGYGFAKVSKAEKAKWDKLINEYLHDRENLKEVFLIVDIRHEPTAQDKQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ ++ TK DK+S Q+ + + K + + SS + +V Sbjct: 127 YEWIIDSGYMGFVIATKFDKISKGQIQKHINQIKKKLEIEDEGL--IFAYSSETKHNKDV 184 Query: 202 LRKAILETIN 211 L + + IN Sbjct: 185 LEEQVEVIIN 194 >gi|56707761|ref|YP_169657.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. tularensis SCHU S4] gi|110670232|ref|YP_666789.1| ribosome biogenesis GTP-binding protein YsxC [Francisella tularensis subsp. tularensis FSC198] gi|224456831|ref|ZP_03665304.1| GTPase EngB [Francisella tularensis subsp. tularensis MA00-2987] gi|254370264|ref|ZP_04986269.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis FSC033] gi|254874574|ref|ZP_05247284.1| GTP-binding protein engB [Francisella tularensis subsp. tularensis MA00-2987] gi|81597736|sp|Q5NH35|ENGB_FRATT RecName: Full=Probable GTP-binding protein EngB gi|119369196|sp|Q14II7|ENGB_FRAT1 RecName: Full=Probable GTP-binding protein EngB gi|56604253|emb|CAG45269.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320565|emb|CAL08652.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis FSC198] gi|151568507|gb|EDN34161.1| ATP/GTP-binding protein [Francisella tularensis subsp. tularensis FSC033] gi|254840573|gb|EET19009.1| GTP-binding protein engB [Francisella tularensis subsp. tularensis MA00-2987] gi|282158932|gb|ADA78323.1| GTPase EngB [Francisella tularensis subsp. tularensis NE061598] Length = 197 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 10/201 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 S ++ G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 1 MNYSKAKYIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F + + LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLFDLGNNN---------RLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K+ D + ++ I+LTK DKL+ + + ++ + + Sbjct: 112 LVDLRHELKEFDSLMIEMAISFDLNLHILLTKADKLNNKERAQANRMIESFLKTFVSTDK 171 Query: 187 -EVIPTSSVKRKGIEVLRKAI 206 SS+ + G++ ++ + Sbjct: 172 ISYQLFSSLTKMGLDKFKEKL 192 >gi|189347671|ref|YP_001944200.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium limicola DSM 245] gi|238692196|sp|B3EGV8|ENGB_CHLL2 RecName: Full=Probable GTP-binding protein EngB gi|189341818|gb|ACD91221.1| GTP-binding protein HSR1-related [Chlorobium limicola DSM 245] Length = 192 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 97/195 (49%), Gaps = 13/195 (6%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 +F + V + LP+ PEI F GRSNVGKSSL+N L K LA+TS+ PG+T+ +N+ Sbjct: 5 NAVFYKSVSALTGLPEETFPEIVFVGRSNVGKSSLLNSLTGVKGLAKTSSTPGKTRLINY 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + VD+PGYGYA WG L+V Y+ +R + V +L+D Sbjct: 65 FQIN---------GNIYFVDLPGYGYAAVGHAEKAHWGNLLVSYIEKRRAIALVLVLVDS 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH D+++ +FL+ Y I++TK DKL+ + + ++ ++ Sbjct: 116 RHPAMASDREMMAFLEYLDRPYGIIMTKDDKLTQKERAAA----RREMESFSAKAKFIVN 171 Query: 191 TSSVKRKGIEVLRKA 205 SS KG L Sbjct: 172 YSSFSGKGKAELLAH 186 >gi|297544145|ref|YP_003676447.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841920|gb|ADH60436.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 192 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 106/197 (53%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F R PK P+I +GRSNVGKS+LIN ++NRKNLA+TS+ PG+T+ +NF++ Sbjct: 8 FTRSAFNEEQYPKDDLPQIVIAGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRGINFYLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K+ W I +L+ LR LLID R Sbjct: 68 NN---------KFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSRNLRHGLLLIDIRRV 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + ++ K + + +VLTK DK+S + AQ+ ++ + + EV+ S+ Sbjct: 119 PTEDDLLMINWFKYKNLPFTVVLTKADKVSKSQAQKAVKDVCKI---FNINREEVVVFSA 175 Query: 194 VKRKGIEVLRKAILETI 210 +++ G+ + + + Sbjct: 176 LEKIGVSQVLSIFEKNV 192 >gi|237755489|ref|ZP_04584111.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium yellowstonense SS-5] gi|237692353|gb|EEP61339.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium yellowstonense SS-5] Length = 197 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PEIA GRSNVGKSSLIN + ++++A+ S PG+T+ +NFF+ Sbjct: 9 FVKSAVKPEDFPPPNKPEIAIVGRSNVGKSSLINAIF-KRSIAKVSATPGKTRLINFFLL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYG+A K +W +I YL R L + +L+D R+ Sbjct: 68 ND---------DIYFVDLPGYGFAAVSHKEKQNWKRMIEDYLLNRENLNLIIMLVDTRYP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +D + +L+ Y +V TKIDKL+ + + + + + + + V S+ Sbjct: 119 PTNLDVLMKEWLESFEKPYIVVGTKIDKLNQSEKAKAEKVIRETLD--LSKNVPVYLVSA 176 Query: 194 VKRKGIEVLRKAILETI 210 + I+ L IL + Sbjct: 177 KEGTNIDKLTSDILSMV 193 >gi|220928341|ref|YP_002505250.1| ribosome biogenesis GTP-binding protein YsxC [Clostridium cellulolyticum H10] gi|254783192|sp|B8I8N7|ENGB_CLOCE RecName: Full=Probable GTP-binding protein EngB gi|219998669|gb|ACL75270.1| GTP-binding protein HSR1-related [Clostridium cellulolyticum H10] Length = 204 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 98/192 (51%), Gaps = 13/192 (6%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + P G PEIAF GRSNVGKSS+IN LVNRK+LAR + PG+T+ +NFF Sbjct: 10 ITAVKPIQYPVTGFPEIAFVGRSNVGKSSIINTLVNRKSLARVGSTPGKTRQINFFDVN- 68 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHG 133 LVD+PGYG+A K+ SW LI YL R L+ V +L+D RH Sbjct: 69 --------GEFYLVDLPGYGFANVSKEMKASWQNLIETYLYSRKENFLKMVVMLVDIRHS 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ +L + I+ K+DK+S + + +++ +VIP S+ Sbjct: 121 PSKDDIIMYQWLKGFGLDTLIIANKVDKISRGQIHVRINDIRKVLQ--LDDAEKVIPFSA 178 Query: 194 VKRKGIEVLRKA 205 R G+E + Sbjct: 179 ENRFGLEKVLAE 190 >gi|300813662|ref|ZP_07093984.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512204|gb|EFK39382.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 198 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 11/194 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 + P PE AF+GRSNVGKSS IN ++ RKNLARTS+ PG+T+ +NF+ + Sbjct: 13 VKKETYPANNLPEFAFAGRSNVGKSSFINAMLGRKNLARTSSTPGKTRTINFYKVNE--- 69 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + LVD+PGYGYA+ KK DSW +I YL R L LL+D RH Q+D Sbjct: 70 ------DLRLVDLPGYGYAKVSKKEKDSWANIINEYLETRENLLETILLVDIRHDPTQLD 123 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++ +L S ++ TK DK+S ++ ++ ++ ++ +IP SSV + Sbjct: 124 LQMYDYLLASGFSGIVIATKKDKISKSSVKKNIDNIARKLK--APVKENIIPFSSVDKDE 181 Query: 199 IEVLRKAILETINY 212 ++ L + + I + Sbjct: 182 VDELWYILEDIIKF 195 >gi|297205853|ref|ZP_06923248.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii JV-V16] gi|297148979|gb|EFH29277.1| ribosome biogenesis GTP-binding protein YsxC [Lactobacillus jensenii JV-V16] Length = 196 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 10/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + P+ PEIA +GRSNVGKSSLIN +NRKNLARTS+ PG+TQ LNF+ Sbjct: 8 YSVSAVREDQYPRDILPEIALAGRSNVGKSSLINSFLNRKNLARTSSQPGKTQTLNFYKV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYAR K + +G +I YL R L + ++ID RH Sbjct: 68 NN---------SFYLVDVPGYGYARVSKAQREQFGEMIQDYLETRGNLEGLIIIIDARHE 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++++ + +V TK+DK+ + + + + + + V+ SS Sbjct: 119 PTVDDIAMYNYALLLDLPILVVATKMDKIKKSQYNKVFSNLRKHL-DLDHDNVSVLTYSS 177 Query: 194 VKRKGIEVLRKAILETI 210 + + L K I + I Sbjct: 178 ESKLHLAELNKWIEDKI 194 >gi|54113475|gb|AAV29371.1| NT02FT0759 [synthetic construct] Length = 197 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 10/200 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + S ++ G ++ LP+ E+AF+GRSN GKSS +N L ++K LAR S PGRTQ Sbjct: 1 MSYSKAKYIMGAAKVSQLPEDTGVEVAFAGRSNAGKSSALNTLTDQKGLARVSKTPGRTQ 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F + + LVD+PGYGYA+ + W + YL+ R L + L Sbjct: 61 LINLFDLGNNN---------RLVDLPGYGYAKVSESIKRQWQSEMENYLTSRKCLNGIVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH +K+ D + ++ I+LTK DKL+ + + ++ + + Sbjct: 112 LVDLRHELKEFDSLMIEMAISFDLNLHILLTKADKLNNKERAQANRMIESFLKTFVSTDK 171 Query: 187 -EVIPTSSVKRKGIEVLRKA 205 SS+ + G++ ++ Sbjct: 172 ISYQLFSSLTKMGLDKFKEK 191 >gi|116781116|gb|ABK21971.1| unknown [Picea sitchensis] Length = 317 Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats. Identities = 71/204 (34%), Positives = 99/204 (48%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ PK PEIA GRSNVGKSSLIN LV +K++A TS PG+TQ +N F+ Sbjct: 120 FVKSSGRAKDCPKNALPEIAMMGRSNVGKSSLINSLVRKKDVAMTSKTPGKTQLINHFLI 179 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYA AP W Y R T+ V LLID Sbjct: 180 N---------KSWYIVDLPGYGYANAPDSARTDWSTFTKGYFLNRDTIVTVLLLIDASVP 230 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 +++D D ++L + + V TK DK + +E +++ + LI P Sbjct: 231 PQKMDLDCANWLGRNNIPLTFVFTKCDKKKSGKSGVKRPEENIKEFQDLISKKYREPPPW 290 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TSSV G + L + + NY Sbjct: 291 IMTSSVTNLGRDDLLLHLSQLRNY 314 >gi|225848212|ref|YP_002728375.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium azorense Az-Fu1] gi|225644647|gb|ACN99697.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurihydrogenibium azorense Az-Fu1] Length = 194 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PE+A GRSNVGKSSLIN + ++++A+ S+ PG+T+ +NFF Sbjct: 8 FIKSAVKPEDYPPPDKPEVAVVGRSNVGKSSLINAIF-KRSVAKVSSTPGKTRLINFFTL 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + VD+PGYG+A +K SW +I YL R L+ + +L+D R+ Sbjct: 67 NN---------DIYFVDLPGYGFASVSQKERLSWQKMIENYLLNRENLKLIIMLVDTRYP 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +D + +LD Y +V TKIDKL+ + + + K + + + S+ Sbjct: 118 PTNLDILMKQWLDTFEKQYFVVGTKIDKLNQSEKAKAKKVIKETLD--LDDNTPIFLVSA 175 Query: 194 VKRKGIEVLRKAILETI 210 + GI+ L I + + Sbjct: 176 KEGTGIDNLVSEIFKAV 192 >gi|226227819|ref|YP_002761925.1| putative GTP-binding protein EngB [Gemmatimonas aurantiaca T-27] gi|259645897|sp|C1AB49|ENGB_GEMAT RecName: Full=Probable GTP-binding protein EngB gi|226091010|dbj|BAH39455.1| putative GTP-binding protein EngB [Gemmatimonas aurantiaca T-27] Length = 204 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 70/186 (37%), Positives = 95/186 (51%), Gaps = 12/186 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ PEIAF GRSNVGKSSL+N L+ RK+ AR S PGRT+ ++FF Sbjct: 20 PEITLPEIAFVGRSNVGKSSLLNKLMRRKSFARVSTTPGRTREIHFFDVNH--------- 70 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L D+PGYGYAR K+ W LI YL L+ V L+D RH D + F Sbjct: 71 QFVLADLPGYGYARISKERKAEWRPLIEGYLGTSPRLQGVVQLLDVRHDPTNDDYVMMDF 130 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L V + +TKIDKL P A+ +E L + +V+P S+ G + L Sbjct: 131 LADVGVPTIVAITKIDKLKPAQARARVE---ELSKRLGLDADQVVPFSAHTGAGRDELAS 187 Query: 205 AILETI 210 A+++ + Sbjct: 188 ALMQLL 193 >gi|154497948|ref|ZP_02036326.1| hypothetical protein BACCAP_01928 [Bacteroides capillosus ATCC 29799] gi|150272938|gb|EDN00095.1| hypothetical protein BACCAP_01928 [Bacteroides capillosus ATCC 29799] Length = 199 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 11/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R + P+ G P++ F+GRSNVGKSS+IN ++ RKNLAR APG+T H+N+F+ Sbjct: 10 FVRSAAKSADFPRDGLPQVVFAGRSNVGKSSVINKILLRKNLARVGAAPGKTTHINYFLI 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYGYA+ + D WG LI + ++ + + +++D RH Sbjct: 70 DE---------KLYLVDLPGYGYAKVSQAERDRWGRLIESWFADNALMTLGIMVVDARHK 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D + + + + +V K+DKL + + L + + + +VI S+ Sbjct: 121 PTADDCTMAEWFKQSGKPFLVVANKLDKLRKSEIEPNLARIRETLG--LPDDVKVIAFSA 178 Query: 194 VKRKGIEVLRKAILETIN 211 K +G + L IL+++ Sbjct: 179 EKGEGRQELLSEILKSMG 196 >gi|73662400|ref|YP_301181.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|119369267|sp|Q49YA5|ENGB_STAS1 RecName: Full=Probable GTP-binding protein EngB gi|72494915|dbj|BAE18236.1| putative GTP-binding protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 195 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L + P+ G E+ SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 11 LISAVKPEQYPETGLSEVGLSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY--- 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 N + VD+PGYGYA+ KK +++G +I +Y+S+R L+ V L+D RH Sbjct: 68 ------NIDNQLVFVDVPGYGYAKVSKKQREAFGKMIEKYISQREELKLVIQLVDLRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++++L + +V TK DK++ Q+ L + + P E+I SSV Sbjct: 122 TEDDILMYNYLKYYEIPTFVVATKEDKIAKGKVQKHLANIQQKLEMEPE--DEIISYSSV 179 Query: 195 KRKGIEVLRKAILETI 210 K + + I + + Sbjct: 180 KNNKQQQIWNVIEKYL 195 >gi|225430037|ref|XP_002284246.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296081893|emb|CBI20898.3| unnamed protein product [Vitis vinifera] Length = 307 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 104/204 (50%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F Sbjct: 109 FVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRI 168 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA AP++ W Y RSTL V+LL+D Sbjct: 169 ND---------SWYLVDLPGYGYAAAPQELRTDWNKFTKDYFQSRSTLVSVFLLVDASIP 219 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 K+ID + S+L + + ++ TK DK +E +E + LIR++ P Sbjct: 220 AKKIDLEYASWLGENQIPMTLIFTKCDKRKKKKNGGKRPEENVEDFQGLIRDFFQTAPPW 279 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TSSV +G + + + + NY Sbjct: 280 IMTSSVSNQGRDEILLHMAQLRNY 303 >gi|256846927|ref|ZP_05552381.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_36A2] gi|294784268|ref|ZP_06749563.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_27] gi|256717725|gb|EEU31284.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_36A2] gi|294488134|gb|EFG35485.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_27] Length = 194 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 14/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 F++ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ + Sbjct: 4 KKADFVKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLI 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++L+ Sbjct: 64 NYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFVLL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D R D ++ +L+ + Y+I+ TKIDKLS + L+ K + + +V Sbjct: 114 DIRRVPSDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRL---VFDNEDV 170 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+ KG + + + E +N Sbjct: 171 FFHSSLTNKGRDEILNFMEEKLN 193 >gi|325117628|emb|CBZ53180.1| Ribosome biogenesis GTP-binding protein YsxC,related [Neospora caninum Liverpool] Length = 1085 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 71/191 (37%), Positives = 109/191 (57%), Gaps = 7/191 (3%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 R LP PE+AF+GRSNVGKSSL+N L R+ + ++ PG TQHL+FF Sbjct: 20 RAALREEELPPPILPEVAFAGRSNVGKSSLLNELAGRRLTSLVTSRPGTTQHLHFF---- 75 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + P + LVD+PGYG+A+A W + YL R LR V++LID RHG+K Sbjct: 76 ---KAGSPPVLCLVDLPGYGFAKAAAATRLQWTEFSLYYLKTRKNLRRVFVLIDARHGLK 132 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + D+++ FL + VS+Q+VLTK D + P +TL K + + + + S+++ Sbjct: 133 ESDKEMLHFLHRWGVSWQLVLTKADLVKPKDLVKTLMLVKEDAKAFRHQAADPVAVSALR 192 Query: 196 RKGIEVLRKAI 206 + ++VLR+ + Sbjct: 193 HQALDVLRREM 203 >gi|114776792|ref|ZP_01451835.1| GTP-binding protein [Mariprofundus ferrooxydans PV-1] gi|114552878|gb|EAU55309.1| GTP-binding protein [Mariprofundus ferrooxydans PV-1] Length = 202 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 104/201 (51%), Gaps = 14/201 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++ V + G P P+IA +G SNVGKSSL+N L R L +TS PG T+ LN Sbjct: 13 PNTQFVQSVADPGAFPAVDLPQIAVAGHSNVGKSSLMNALFGRNGLVKTSKNPGCTRLLN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + +VD+PGYGYARAPKK W +I YL+ + ++ V LL+D Sbjct: 73 LFDVD---------GQLLVVDLPGYGYARAPKKEQHRWISMIEGYLAN-ADIKLVLLLLD 122 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG K D + +L++ + + V TK DKLS + L++ + + Sbjct: 123 IRHGPKDSDLQLIEWLNEAGIRWLPVATKADKLSGNSRSIRLQEMTDAMGGLL----RPM 178 Query: 190 PTSSVKRKGIEVLRKAILETI 210 PTSS K GI+ LR I + + Sbjct: 179 PTSSFKATGIDQLRAVIQDEL 199 >gi|289577857|ref|YP_003476484.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter italicus Ab9] gi|289527570|gb|ADD01922.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter italicus Ab9] Length = 192 Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + PK P+I +GRSNVGKS+LIN ++NRKNLA+TS+ PG+T+ +NF++ Sbjct: 8 FTKSAFNEEQYPKDDLPQIVIAGRSNVGKSTLINTVLNRKNLAKTSSRPGKTRGINFYLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K+ + W I +L+ LR LLID R Sbjct: 68 NN---------KFYLVDLPGYGYAKVSKEMKNQWAHNIETFLNTSRNLRHGLLLIDIRRV 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + ++ K + + +VLTK DK++ + AQ+ ++ + + EV+ S+ Sbjct: 119 PTEDDLLMINWFKYKNLPFTVVLTKADKVNKSQAQKAVKDVCKI---FNINREEVVIFSA 175 Query: 194 VKRKGIEVLRKAILETI 210 +++ G+ + + + Sbjct: 176 LEKIGVSQVLSIFEKNV 192 >gi|160902807|ref|YP_001568388.1| small GTP-binding protein [Petrotoga mobilis SJ95] gi|189037183|sp|A9BHV0|ENGB_PETMO RecName: Full=Probable GTP-binding protein EngB gi|160360451|gb|ABX32065.1| small GTP-binding protein [Petrotoga mobilis SJ95] Length = 196 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 12/201 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 ++ V +I LP EIAF+GRSNVGKSS +N ++ K +A+ S+ PG+T+ +N+ Sbjct: 5 KAQLIKTVYKIEDLPPPDKKEIAFAGRSNVGKSSFLNAILGIK-IAKVSSTPGKTRSINY 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 ++ D VD+PGYG+A K+ + W L+ Y R +L V LLID Sbjct: 64 YLVND---------KYYFVDLPGYGFASVSKQEKERWNVLMNEYFKTRFSLSAVSLLIDH 114 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 RH +++D + +L + +LTK DKL+ + + E K Y +P Sbjct: 115 RHMPQKLDYAMVEWLKDLGTPFLFILTKSDKLTKSEKAKLFEDIKRSFSTYGEYI--YMP 172 Query: 191 TSSVKRKGIEVLRKAILETIN 211 SS ++G++ + K I E + Sbjct: 173 FSSKTKEGLKEVLKTIGEILG 193 >gi|197123177|ref|YP_002135128.1| ribosome biogenesis GTP-binding protein YsxC [Anaeromyxobacter sp. K] gi|220917966|ref|YP_002493270.1| GTP-binding protein HSR1-related [Anaeromyxobacter dehalogenans 2CP-1] gi|238689884|sp|B4UHX9|ENGB_ANASK RecName: Full=Probable GTP-binding protein EngB gi|254783182|sp|B8JEQ8|ENGB_ANAD2 RecName: Full=Probable GTP-binding protein EngB gi|196173026|gb|ACG73999.1| GTP-binding protein HSR1-related [Anaeromyxobacter sp. K] gi|219955820|gb|ACL66204.1| GTP-binding protein HSR1-related [Anaeromyxobacter dehalogenans 2CP-1] Length = 216 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 94/187 (50%), Gaps = 3/187 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + P+ PEIAF GRSNVGKSS++N L RK LAR S+ PGRT+ L FF Sbjct: 10 FAKTATRPEEWPRGATPEIAFVGRSNVGKSSMLNALARRKGLARVSSTPGRTRALQFFDL 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 A+ D+PGYGYA+ + D W +I YL +R LR V L++D RH Sbjct: 70 SYRPTPAARPRAIRFCDLPGYGYAKVARAERDRWTAMIEDYLRDRDVLRAVVLIVDARHP 129 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+D +FL + TK DKL L++ + + A + +P S+ Sbjct: 130 PSESDEDAAAFLVSAGRRLVVAATKTDKLPKARRVLALQQVERAL---GLARGDAVPFSA 186 Query: 194 VKRKGIE 200 V+ G + Sbjct: 187 VEGTGTD 193 >gi|34762743|ref|ZP_00143732.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887593|gb|EAA24673.1| GTP-binding protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 194 Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 14/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 F++ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ + Sbjct: 4 KKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLI 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++L+ Sbjct: 64 NYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFVLL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D R D ++ +L+ + Y+I+ TKIDKLS + L+ K + + +V Sbjct: 114 DIRRVPSDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRL---VFDNEDV 170 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+ KG + + + E +N Sbjct: 171 FFHSSLTNKGRDEILNFMEEKLN 193 >gi|227500205|ref|ZP_03930274.1| GTPase [Anaerococcus tetradius ATCC 35098] gi|227217727|gb|EEI83031.1| GTPase [Anaerococcus tetradius ATCC 35098] Length = 195 Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 11/185 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P PEIA GRSNVGKSS IN + RK LA+TS+ PG+T+ +NF+ D Sbjct: 16 KQWPGEDLPEIALVGRSNVGKSSFINSFLGRKKLAKTSSKPGKTRTINFYRIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ K D W LI YL +R +LR V+L++D RH +D + Sbjct: 70 ---KFRLVDLPGYGYAKVSKAEKDKWDKLINEYLHQRESLREVFLIVDIRHEPTTLDCQM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + + ++ TK DK+ + Q+ ++ + + SS + +V Sbjct: 127 YKWIRESGFTGFVIATKFDKIKKSQIQKNIKAIMKKLEIEDEGL--IFAYSSETKHNKDV 184 Query: 202 LRKAI 206 L + + Sbjct: 185 LEEQV 189 >gi|223557993|gb|ACM90999.1| GTP-binding cell division protein [uncultured bacterium URE4] Length = 198 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 70/194 (36%), Positives = 97/194 (50%), Gaps = 9/194 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 IF ++ P PE AF GRSNVGKSSLIN L LA+TS PG+TQ +N F+ Sbjct: 7 IFSGSSTKVEQKPARKLPEFAFIGRSNVGKSSLINALTGNSKLAKTSQTPGKTQLVNHFL 66 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYAR P K +I Y++ L +++L+D RH Sbjct: 67 IND---------NWYLVDLPGYGYARLPDKERAKLRHIIWDYVNRSEELVMLFVLLDSRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++++D S L +K + + ++ TK DK T +EK K + P V +S Sbjct: 118 DMQEVDLRFISELGEKGIPFGLIFTKADKQGATVTAAQVEKNKARLLEEWEELPPVFISS 177 Query: 193 SVKRKGIEVLRKAI 206 SV G E + I Sbjct: 178 SVSGLGREEILNYI 191 >gi|19705309|ref|NP_602804.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|254302269|ref|ZP_04969627.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|24418375|sp|Q8RHK1|ENGB_FUSNN RecName: Full=Probable GTP-binding protein EngB gi|19713278|gb|AAL94103.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|148322461|gb|EDK87711.1| GTP-binding protein [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 194 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 14/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 F++ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ + Sbjct: 4 KKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLI 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++L+ Sbjct: 64 NYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFVLL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D R D ++ +L+ + Y+I+ TKIDKLS + L+ K + + +V Sbjct: 114 DIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRL---VFDNEDV 170 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+ KG + + + E +N Sbjct: 171 FFHSSLTNKGRDEILNFMEEKLN 193 >gi|198284769|ref|YP_002221090.1| ribosome biogenesis GTP-binding protein YsxC [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665631|ref|YP_002427454.1| ribosome biogenesis GTP-binding protein YsxC [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249290|gb|ACH84883.1| GTP-binding protein HSR1-related [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517844|gb|ACK78430.1| ribosome biogenesis GTP-binding protein YsxC [Acidithiobacillus ferrooxidans ATCC 23270] Length = 228 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 69/193 (35%), Positives = 100/193 (51%), Gaps = 12/193 (6%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 V + G LP E+A +GRSNVGKSS +N+L R+ LAR S PGRTQ +N F Sbjct: 22 SVTQAGQLPADDGAEVAIAGRSNVGKSSTLNMLTERRALARVSRTPGRTQAINIFDLD-- 79 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 P LVD+PGYGYA+ P+ SWG L+ +YL R +LR + L++D RH Sbjct: 80 -------PGQRLVDLPGYGYAKVPEALRRSWGPLLEQYLRRRGSLRGLILVMDIRHPYTA 132 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D D+ +F + + ++L K DKLS A + + + + + A + S+ Sbjct: 133 HDADLIAFAEGCSRPVHVLLNKADKLSRGAAIQEMARLRRIPELQGVA---MQLFSAQSG 189 Query: 197 KGIEVLRKAILET 209 GI+ L + I Sbjct: 190 LGIDELHERIARW 202 >gi|313672845|ref|YP_004050956.1| ribosome biogenesis gtp-binding protein ysxc [Calditerrivibrio nitroreducens DSM 19672] gi|312939601|gb|ADR18793.1| ribosome biogenesis GTP-binding protein YsxC [Calditerrivibrio nitroreducens DSM 19672] Length = 196 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 11/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P PE+ F G+SNVGKSS IN L+NRK+LAR PG+T+ LNFF Sbjct: 7 FIKSAFYPKDFPIIDLPEVCFVGKSNVGKSSAINTLINRKDLARVGKTPGKTRLLNFFSI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K + LVD+PGYGYA+ KK + W I YL R+ L+ V ++D R Sbjct: 67 ------KAKDISFVLVDLPGYGYAQVSKKEREEWKKSIENYLKFRNNLKLVVFILDIRRD 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE-VIPTS 192 + D+ +F +L + ++LTK DKLS + L++ + +P + + I S Sbjct: 121 PDEQDEVMFKWLKAYNKDFVMLLTKSDKLSNNEIAKRLKE----LYLHPMINVDNCIIFS 176 Query: 193 SVKRKGIEVLRKAILETI 210 S+ ++G + L + I+E Sbjct: 177 SLTKRGKDELYQKIVECC 194 >gi|222874131|gb|EEF11262.1| predicted protein [Populus trichocarpa] Length = 228 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LPK PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N F Sbjct: 9 FLTTAAQLHHLPKVDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINLFSL 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K + L D+PGYGYA + + W +++ YL R +L + LL D R G Sbjct: 69 G-----KQGVTDAVLADLPGYGYAAVSRTDKQRWQRVMLNYLVSRESLTGIVLLCDPRLG 123 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ + L ++ + + ++LTK DKL+ + L T+ EV Sbjct: 124 LTELDEALLDALRPRVQEGLKFLVLLTKADKLTRAEQAKVLSITR-----LNAGGGEVRM 178 Query: 191 TSSVKRKGIEVLRKAILET 209 S++K++G++ + + + Sbjct: 179 FSALKKQGVDEVAQLLWHW 197 >gi|160901032|ref|YP_001566614.1| ribosome biogenesis GTP-binding protein YsxC [Delftia acidovorans SPH-1] gi|160366616|gb|ABX38229.1| GTP-binding protein HSR1-related [Delftia acidovorans SPH-1] Length = 259 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ LPK PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N F Sbjct: 40 FLTTAAQLHHLPKVDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHINLFSL 99 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K + L D+PGYGYA + + W +++ YL R +L + LL D R G Sbjct: 100 G-----KQGVTDAVLADLPGYGYAAVSRTDKQRWQRVMLNYLVSRESLTGIVLLCDPRLG 154 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + ++D+ + L ++ + + ++LTK DKL+ + L T+ EV Sbjct: 155 LTELDEALLDALRPRVQEGLKFLVLLTKADKLTRAEQAKVLSITR-----LNAGGGEVRM 209 Query: 191 TSSVKRKGIEVLRKAILET 209 S++K++G++ + + + Sbjct: 210 FSALKKQGVDEVAQLLWHW 228 >gi|237743263|ref|ZP_04573744.1| GTP-binding protein [Fusobacterium sp. 7_1] gi|260495114|ref|ZP_05815243.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_33] gi|229433042|gb|EEO43254.1| GTP-binding protein [Fusobacterium sp. 7_1] gi|260197557|gb|EEW95075.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 3_1_33] Length = 194 Score = 203 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 14/199 (7%) Query: 14 FLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ +N+F+ Sbjct: 8 FIKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLINYFL 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D +VD+PGYG+A+ PK+ WG + RY++ + + V++L+D R Sbjct: 68 IND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFVLLDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 D ++ +L+ + Y+I+ TKIDKLS + L+ K + + +V S Sbjct: 118 VPSDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRL---VFDNEDVFFHS 174 Query: 193 SVKRKGIEVLRKAILETIN 211 ++ KG + + I E +N Sbjct: 175 AITNKGRDEILNFIEEKLN 193 >gi|218283666|ref|ZP_03489627.1| hypothetical protein EUBIFOR_02221 [Eubacterium biforme DSM 3989] gi|218215655|gb|EEC89193.1| hypothetical protein EUBIFOR_02221 [Eubacterium biforme DSM 3989] Length = 194 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E P++ PE+ GRSNVGKSS IN L N+K LA N PG+T+ +NFF Sbjct: 5 FVISAVEKEQWPESDLPEVVVVGRSNVGKSSFINALTNKKKLAYVGNTPGKTRLINFFKI 64 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K+ + G ++ Y ++R + CV L+D RHG Sbjct: 65 DN---------TWMLVDVPGYGYAKMSKQMLIKMGKMMDTYFNQREQICCVVQLVDARHG 115 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D D+ + + IV TK+DK+ T L+ + + SS Sbjct: 116 ATHDDLDMIEMIQSLGIQIVIVATKVDKIPKTKRVRALKDISQQLH---LPMKNIFGISS 172 Query: 194 VKRKGIEVLRKAILETI 210 ++ G E + + I E + Sbjct: 173 TEKTGFEPVLEKINEIV 189 >gi|326315774|ref|YP_004233446.1| GTP-binding protein engB [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372610|gb|ADX44879.1| GTP-binding protein engB [Acidovorax avenae subsp. avenae ATCC 19860] Length = 253 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ LP PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 27 HTARFLTTAAQLHHLPPIDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHIN 86 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + N+ L D+PGYGYA + + W ++V YL R L + LL D Sbjct: 87 LFALG-----RQNVTDAVLADLPGYGYAAVSRSDKQRWQQVMVNYLVSRKGLTGIVLLCD 141 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + + + + ++LTK DKL+ L T+ Sbjct: 142 PRLGLTELDEALLEAVRPRVEAGLKFLVLLTKADKLTRAEQARVLSITR-----LQAGGG 196 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S++K++G++ + + + + Sbjct: 197 EVKMFSALKKQGVDEVAQLLWQW 219 >gi|296328557|ref|ZP_06871076.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154366|gb|EFG95165.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 194 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 14/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 F++ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ + Sbjct: 4 KKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLI 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++L+ Sbjct: 64 NYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFVLL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D R D ++ +L+ + Y+I+ TKIDKLS + L+ K + + +V Sbjct: 114 DIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLI---FDNEDV 170 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+ KG + + + E +N Sbjct: 171 FFHSSLTNKGRDEILNFMEEKLN 193 >gi|88658079|ref|YP_507406.1| GTPase EngB [Ehrlichia chaffeensis str. Arkansas] gi|119369195|sp|Q2GGM7|ENGB_EHRCR RecName: Full=Probable GTP-binding protein EngB gi|88599536|gb|ABD45005.1| GTP-binding protein EngB [Ehrlichia chaffeensis str. Arkansas] Length = 200 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 110/201 (54%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ G I LP PEIA +GRSNVGKSSLIN + N K A+TS+ PG T+ +N Sbjct: 8 SKCEFMIGATHIKSLPDFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSKPGCTKQIN 67 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F++ M LVD+PGYGY++A K ++++ L+ YL L V LLID Sbjct: 68 FYLIN--------KDFMVLVDLPGYGYSKADKTTINNYLCLMEYYLLNSRNLLKVILLID 119 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + G K+ID D ++L+ + YQ+VLTKIDK+ + K L N +I Sbjct: 120 AKVGFKEIDLDFINWLELHQIHYQLVLTKIDKIKKEMLDVNVNYIKNL--NLDFIMYPII 177 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS ++GIE L I + I Sbjct: 178 STSSQCKQGIEELIYEIAQCI 198 >gi|149917815|ref|ZP_01906310.1| GTP-binding protein [Plesiocystis pacifica SIR-1] gi|149821335|gb|EDM80737.1| GTP-binding protein [Plesiocystis pacifica SIR-1] Length = 264 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 4/190 (2%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F P++ P A PEIA +GRSNVGKSSL+N ++ LAR S PGRT+ LN Sbjct: 24 HTARFELSAPKLADCPPADLPEIAVAGRSNVGKSSLLNAFTEQRGLARVSRTPGRTRLLN 83 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + + + ++ VD+PGYG+A+A ++ DS+G +I YL +R L + +LID Sbjct: 84 FFHMQ-LAGPREAQVSLRWVDLPGYGFAKARREVRDSFGPMIESYLRQRDALGGLLVLID 142 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RHG K D ++ F + ++ + TK DKL ++ + P +V+ Sbjct: 143 ARHGPKDSDFELLEFCREISLPSLLCATKCDKLGAAERGLLPKRFAEAMGIDPR---DVL 199 Query: 190 PTSSVKRKGI 199 TS+ +G+ Sbjct: 200 LTSASSGQGL 209 >gi|163781961|ref|ZP_02176961.1| hypothetical protein HG1285_03723 [Hydrogenivirga sp. 128-5-R1-1] gi|159883181|gb|EDP76685.1| hypothetical protein HG1285_03723 [Hydrogenivirga sp. 128-5-R1-1] Length = 184 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 106/195 (54%), Gaps = 18/195 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ P PE+ F GRSNVGKSSLIN++ R N+AR S PGRT+ +N+F+ Sbjct: 5 FLKSTT--ADFPPPDKPEVVFVGRSNVGKSSLINMVTGR-NIARVSKEPGRTRTINYFLL 61 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRH 132 D ++ LVD+PGYG+AR PK+ D W ++ Y R +R V+LLID Sbjct: 62 ND---------SVYLVDVPGYGFARVPKEEQDKWKRMMENYFKGRKENIRVVFLLIDAVA 112 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 GV+++D+ + +L + + +VLTK DK TL++ K L+ ++ +S Sbjct: 113 GVQKLDRQMIEWLQFVGLPFVVVLTKTDKAKQKELSRTLKQVKELV-----GSSAIVMSS 167 Query: 193 SVKRKGIEVLRKAIL 207 + + +G + + I Sbjct: 168 AREGRGKKEILSRIF 182 >gi|241762863|ref|ZP_04760926.1| GTP-binding protein HSR1-related [Acidovorax delafieldii 2AN] gi|241368038|gb|EER62243.1| GTP-binding protein HSR1-related [Acidovorax delafieldii 2AN] Length = 244 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ LP PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 27 HTARFLTTAAQLHHLPPIDVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHIN 86 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K + L D+PGYGYA + + W ++V YL R L + LL D Sbjct: 87 LFALG-----KQGVTDAVLADLPGYGYAAVSRSDKVRWQQVMVNYLVSRPGLTGIVLLCD 141 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + ++ + + IVLTK DKL+ + L T+ Sbjct: 142 PRLGLTELDEALLEVVRPRVEEGLKFLIVLTKADKLTRAEQAKVLSITR-----LQAGGG 196 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S++K++G++ + + + + Sbjct: 197 EVKMFSALKKQGVDDVAQLLWQW 219 >gi|282850554|ref|ZP_06259933.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella parvula ATCC 17745] gi|282580047|gb|EFB85451.1| ribosome biogenesis GTP-binding protein YsxC [Veillonella parvula ATCC 17745] Length = 232 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 78/203 (38%), Positives = 106/203 (52%), Gaps = 7/203 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A + + P+ EIAF GRSNVGKSSLIN L N + LA S PG+T+ +N+ Sbjct: 29 AAKYNTSCVKADQYPEGDTVEIAFLGRSNVGKSSLINSLCNYRGLALVSGQPGKTKTINY 88 Query: 71 FVPK---DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 F + D S + LVD+PGYG+A+ K N + W I Y+ L + LL Sbjct: 89 FDIESKEDISETEERRYNWFLVDLPGYGFAKTNKGNRNLWSSFIADYILHSERLMLLCLL 148 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID RH ID+ F +L + V QIV+TK DKL+ +L K L YPTA Sbjct: 149 IDGRHPEMAIDKVAFDWLVEAGVPLQIVVTKADKLTAKEKSASLSIIKEL---YPTATSP 205 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 I SS+K G E+L++ I + + Sbjct: 206 -ILYSSLKHTGRELLQQRINKIL 227 >gi|188996268|ref|YP_001930519.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931335|gb|ACD65965.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 197 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 12/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + P PEIA GRSNVGKSSLIN + ++++A+ S PG+T+ +NFF+ Sbjct: 9 FVKSAVKPEDFPPPDKPEIAIVGRSNVGKSSLINAIF-KRSIAKVSATPGKTKLINFFLL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + VD+PGYG+A K +W +I YL R L + +L+D R+ Sbjct: 68 ND---------DIYFVDLPGYGFAAVSHKEKQNWKRMIEDYLLNRENLNLIIMLVDTRYP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +D + +L+ Y +V TKIDKL+ + + + + + + V S+ Sbjct: 119 PTNLDILMKEWLESFEKPYIVVGTKIDKLNQSEKAKAEKVIRETLD--LSKDVPVYLVSA 176 Query: 194 VKRKGIEVLRKAILETI 210 + I+ L IL + Sbjct: 177 KEGTNIDKLTSDILSMV 193 >gi|108761214|ref|YP_631233.1| putative GTP-binding protein YihA [Myxococcus xanthus DK 1622] gi|119369219|sp|Q1D7Z0|ENGB_MYXXD RecName: Full=Probable GTP-binding protein EngB gi|108465094|gb|ABF90279.1| putative GTP-binding protein YihA [Myxococcus xanthus DK 1622] Length = 206 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 96/198 (48%), Gaps = 5/198 (2%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ E P E+AF GRSNVGKSS+IN L R+ L R SN PGRT+ LNFF Sbjct: 9 FVTTAVEPKGYPTDHTAEVAFVGRSNVGKSSMINALTGRRKLVRVSNTPGRTRTLNFFDV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L D+PGYG+A+A K + W +I YL +R L V ++D G Sbjct: 69 D--LERGGVRHQIRLADLPGYGFAKASKADKAQWEKMITTYLEKRHRLEAVVSIVDVEVG 126 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D +L +V TK+D+L+ + L + L+ ++P SS Sbjct: 127 PTPDDLTTLDYLQAHNRRVLVVATKVDRLTKARLKPRLVELSKLMDLPLEV---ILPFSS 183 Query: 194 VKRKGIEVLRKAILETIN 211 ++ G++ + A+L+T Sbjct: 184 TEKLGVDEVWGALLDTFG 201 >gi|159477825|ref|XP_001697009.1| hypothetical protein CHLREDRAFT_150723 [Chlamydomonas reinhardtii] gi|158274921|gb|EDP00701.1| predicted protein [Chlamydomonas reinhardtii] Length = 276 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 13/202 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 A +++ + P PE A GRSNVGKSSLIN++ RK+LA S PG+T+ +N Sbjct: 64 KAAEYMQSCVTVADCPPPRYPEFAVIGRSNVGKSSLINMITGRKDLALVSKEPGKTKCIN 123 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYG+A+ + + Y + R L V LL+D Sbjct: 124 HFIINE---------NWYLVDLPGYGFAKVGFQGRQQFDTFTKEYFNTRPNLAMVLLLVD 174 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAH 185 ++ID + ++L V + IV TK DK L+ + K + Sbjct: 175 ASIKPQRIDLEYANWLTDNEVPFTIVFTKADKRRKGLTAAVRDSHVTAFKRALLQDLAYL 234 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P + TS+ K G L I Sbjct: 235 PPSLLTSAAKGLGRGELLSFIA 256 >gi|326391011|ref|ZP_08212560.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter ethanolicus JW 200] gi|325992956|gb|EGD51399.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter ethanolicus JW 200] Length = 194 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 12/195 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +R PK P+I GRSNVGKS+LIN ++NRKNLA+TS+ PG+T+ +NF++ Sbjct: 9 VRTAFNEEQYPKDNFPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRGINFYLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + LVD+PGYGYA+ K+ W I +L+ LR LLID R Sbjct: 69 N---------GFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSKNLRHALLLIDIRRTP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + ++ K + + +VLTK DK++ + + + + + + +I SS+ Sbjct: 120 TEDDFLMVNWFRHKELPFTVVLTKADKVNKSEI---VNAVEGICKTFNIDSERIIVFSSL 176 Query: 195 KRKGIEVLRKAILET 209 K+ G+ + E Sbjct: 177 KKMGVSQVLSIFEEW 191 >gi|167038047|ref|YP_001665625.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040912|ref|YP_001663897.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter sp. X514] gi|256752434|ref|ZP_05493293.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1] gi|300914948|ref|ZP_07132264.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter sp. X561] gi|307723818|ref|YP_003903569.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter sp. X513] gi|320116456|ref|YP_004186615.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687604|sp|B0K530|ENGB_THEPX RecName: Full=Probable GTP-binding protein EngB gi|238687677|sp|B0KBA1|ENGB_THEP3 RecName: Full=Probable GTP-binding protein EngB gi|166855152|gb|ABY93561.1| small GTP-binding protein [Thermoanaerobacter sp. X514] gi|166856881|gb|ABY95289.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256748703|gb|EEU61748.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1] gi|300889883|gb|EFK85029.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter sp. X561] gi|307580879|gb|ADN54278.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter sp. X513] gi|319929547|gb|ADV80232.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 192 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 13/196 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F R PK P+I GRSNVGKS+LIN ++NRKNLA+TS+ PG+T+ +NF++ Sbjct: 8 FARSAFNEEQYPKDNLPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSRPGKTRGINFYLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+ K+ W I +L+ LR LID R Sbjct: 68 NN---------KFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSQNLRHGLFLIDIRRN 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + ++ K + + +VLTK DK++ + +++ +E + + EVI S+ Sbjct: 119 PTEDDFLMINWFKHKNLPFTVVLTKADKVNKSESRKAVEDICKI---FKINREEVIIFSA 175 Query: 194 VKRKGIEVLRKAILET 209 +++ G+ + I E Sbjct: 176 LEKMGVSQVLS-IFEK 190 >gi|326490668|dbj|BAJ90001.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326495488|dbj|BAJ85840.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 307 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 90/206 (43%), Gaps = 12/206 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ PK PE A GRSNVGKSSLIN L RK A TS PG+TQ +N Sbjct: 105 KEAEFIGCSAHARDCPKDDRPEFAVLGRSNVGKSSLINSLTRRKEAALTSKKPGKTQTIN 164 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 + + LVD+PGYG+A A K W Y R +L V LL+D Sbjct: 165 HHLIN---------KSWYLVDLPGYGFAAASKTARMDWSSFTKGYFLNRDSLVGVLLLVD 215 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH---P 186 +QID D ++L + V V TK DK+ E K + N + + P Sbjct: 216 ASVPTQQIDLDCANWLGRNNVGLTFVFTKCDKVKKGKGGRPDENIKEFLENIGSLYPRPP 275 Query: 187 EVIPTSSVKRKGIEVLRKAILETINY 212 I TSS G E L + + NY Sbjct: 276 PWIMTSSTTGLGREGLLLHMSQLRNY 301 >gi|256028618|ref|ZP_05442452.1| GTP-binding protein [Fusobacterium sp. D11] gi|289766536|ref|ZP_06525914.1| GTP-binding protein [Fusobacterium sp. D11] gi|289718091|gb|EFD82103.1| GTP-binding protein [Fusobacterium sp. D11] Length = 194 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 14/199 (7%) Query: 14 FLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ +N+F+ Sbjct: 8 FIKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLINYFL 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D +VD+PGYG+A+ PK+ WG + RY++ + + V++L+D R Sbjct: 68 IND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KIVFVLLDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 D ++ +L+ + Y+I+ TKIDKLS + L+ K + + +V S Sbjct: 118 VPSDEDIEMLEWLEYNDMDYKIIFTKIDKLSNNERAKQLKAIKTRL---VFDNEDVFFHS 174 Query: 193 SVKRKGIEVLRKAILETIN 211 ++ KG + + + E +N Sbjct: 175 ALTNKGRDEILDFMEEKLN 193 >gi|171057084|ref|YP_001789433.1| ribosome biogenesis GTP-binding protein YsxC [Leptothrix cholodnii SP-6] gi|170774529|gb|ACB32668.1| GTP-binding protein HSR1-related [Leptothrix cholodnii SP-6] Length = 265 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 11/208 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL + LP PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N Sbjct: 24 HTARFLTTASRLDQLPAHDLPEIAFVGRSNAGKSTAINTLAQQRQLAFASKKPGRTQHIN 83 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + P+ D+PGYGYA + W ++ YL R L V +ID Sbjct: 84 LFELG-----PKDAPSALWADLPGYGYAAVERAAKLRWQAVMADYLKMRRNLAGVVQMID 138 Query: 130 CRHGVKQIDQDVFSFLDKK----AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 RHG +D+ + F+ + V ++LTK DKL+ A L + + + T Sbjct: 139 SRHGFTALDRQLLEFVGPRVVTGEVKLLVLLTKADKLNRKEASAALRSAQDFLADLSTDQ 198 Query: 186 PE--VIPTSSVKRKGIEVLRKAILETIN 211 + V S++KR+G+E + + + + + Sbjct: 199 SDLSVTLFSALKRQGVEDVAQTLHDWRD 226 >gi|330999051|ref|ZP_08322775.1| ribosome biogenesis GTP-binding protein YsxC [Parasutterella excrementihominis YIT 11859] gi|329575638|gb|EGG57169.1| ribosome biogenesis GTP-binding protein YsxC [Parasutterella excrementihominis YIT 11859] Length = 213 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 3/203 (1%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ V E+ LP+ PEIAF+GRSN GKS+ IN+L + LA +S PGRTQ LNF Sbjct: 7 SARFVMSVSELMGLPETELPEIAFAGRSNAGKSTTINVLCRQSRLAFSSKTPGRTQLLNF 66 Query: 71 FVPKDFSNLKNNL-PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + P LVD+PGYGYA+A + +W GL+ Y+ +R L + L++D Sbjct: 67 FELSLKGEIPRQRIPECFLVDLPGYGYAKAAPETRKNWAGLVGGYVQQRPQLMGMVLVMD 126 Query: 130 CRHGVKQIDQDVFSFL-DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 R D+ + FL + + ++L K D+L ++ L K H V Sbjct: 127 ARRPFMPADEFLLDFLSVRPDLKLHLLLNKADQLKTMEKRQVLNAVKDRALTMGN-HVSV 185 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 S +K++G+E L+ + +N Sbjct: 186 QLFSGLKKEGVEQLQNVLCTWLN 208 >gi|302843904|ref|XP_002953493.1| hypothetical protein VOLCADRAFT_82197 [Volvox carteri f. nagariensis] gi|300261252|gb|EFJ45466.1| hypothetical protein VOLCADRAFT_82197 [Volvox carteri f. nagariensis] Length = 295 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 13/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L+ + P PE A GRSNVGKSSLIN+L RK+LA S PG+T+ +N F+ Sbjct: 87 YLQSCVTVSDCPTPRFPEFAVIGRSNVGKSSLINMLTGRKDLALVSKQPGKTKCINHFLI 146 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+A+ + + Y R L V+LL+D Sbjct: 147 N---------GSWYFVDLPGYGFAKVGVQGRQQFDTFTREYFKTRPNLAMVFLLVDASIP 197 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDK----LSPTTAQETLEKTKYLIRNYPTAHPEVI 189 ++ID + ++L V + +V TK+DK +S + + K + P + Sbjct: 198 PQKIDLEYANWLTDNEVPFTLVFTKVDKRRKGVSSSACDSHVTAFKRALLQDLAFLPPSV 257 Query: 190 PTSSVKRKGIEVLRKAIL 207 TS K G + I Sbjct: 258 LTSCAKGLGRGEMLNFIA 275 >gi|242242937|ref|ZP_04797382.1| GTPase [Staphylococcus epidermidis W23144] gi|242233538|gb|EES35850.1| GTPase [Staphylococcus epidermidis W23144] gi|319400989|gb|EFV89208.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909] Length = 195 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 11/194 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + P G E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ + Sbjct: 13 SAVKKAQYPDTGLTEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNIDE- 71 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH + Sbjct: 72 --------QLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTE 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++++L + ++ TK DK++ Q+ +++ K + P +I SS+K Sbjct: 124 DDVLMYNYLKHFDIPTLVICTKEDKIAKGKVQKHIKRIKDKLELEPG--DNIISYSSIKN 181 Query: 197 KGIEVLRKAILETI 210 + + I I Sbjct: 182 SKQQEIWNFIETYI 195 >gi|70726255|ref|YP_253169.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus haemolyticus JCSC1435] gi|119369266|sp|Q4L712|ENGB_STAHJ RecName: Full=Probable GTP-binding protein EngB gi|68446979|dbj|BAE04563.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 195 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P G E+A SGRSNVGKSS IN ++ RKN+ARTS PG+TQ LNFF Sbjct: 11 IISAVQEAQYPDTGLSEVALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K + +G +I YL++R +L+ V L+D RH Sbjct: 71 D---------QLIFVDVPGYGYAKVSKSQREKFGKMIEEYLTKRESLKLVIQLVDLRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++++L + ++ TK DK++ Q+ ++ K + P +I SS+ Sbjct: 122 TEDDVLMYNYLKHFDIPTLVICTKEDKIAKGKIQKHIKNIKEKLDLDP--DDTIISYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 + + + I + Sbjct: 180 QNTKQQQIWDLIANYL 195 >gi|294783777|ref|ZP_06749101.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 1_1_41FAA] gi|294480655|gb|EFG28432.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium sp. 1_1_41FAA] Length = 194 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 F++ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ + Sbjct: 4 KKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLI 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++L+ Sbjct: 64 NYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFVLL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D R D ++ +L+ + Y+I+ TKIDKLS + L+ K + +V Sbjct: 114 DIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRL---VFEKEDV 170 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+ KG + + + E +N Sbjct: 171 FFHSSLTNKGRDEILTFMEEKLN 193 >gi|314933828|ref|ZP_07841193.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus caprae C87] gi|313653978|gb|EFS17735.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus caprae C87] Length = 195 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNFF Sbjct: 11 IISAVQEAQYPETNLSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G +I YL++R LR V L+D RH Sbjct: 71 E---------QLIFVDVPGYGYAKVSKAQREKFGKMIEEYLTQRENLRLVIQLVDLRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++++L + ++ TK DK++ Q+ L+ K + P +I SS+ Sbjct: 122 TEDDVLMYNYLKHFDIPTLVICTKEDKIAKGKVQKHLKNIKDKLELEPE--DSIISYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 K + + I + Sbjct: 180 KNNKQQQIWDLISTYL 195 >gi|258405422|ref|YP_003198164.1| ribosome biogenesis GTP-binding protein YsxC [Desulfohalobium retbaense DSM 5692] gi|257797649|gb|ACV68586.1| ribosome biogenesis GTP-binding protein YsxC [Desulfohalobium retbaense DSM 5692] Length = 205 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 12/194 (6%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P P++A +GRSNVGKSSLIN L RK LA+ S+ PG+T+ LNF+ Sbjct: 8 TTAYTAEQFPSLDVPQVALAGRSNVGKSSLINALAGRKKLAKISSTPGKTRSLNFY---- 63 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + LVD+PGYGYA+ K W L+ Y + + L+ V +L+D R + Sbjct: 64 ----RAAGDGFYLVDLPGYGYAKRSKTERGQWAALMDVYFQKSTGLQAVVVLLDSRLPPQ 119 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 ++D ++ SFL ++++ LTK DK + K L+ + +I S+ Sbjct: 120 KLDLELISFLQRESIPLIAALTKADKCKNKDRSRVQRQWKELL----SPSAPLILFSAKT 175 Query: 196 RKGIEVLRKAILET 209 G + L AI E Sbjct: 176 GMGKQTLWAAIREA 189 >gi|330684286|gb|EGG96024.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis VCU121] Length = 195 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ PE+A SGRSNVGKSS IN ++ RKN+ARTS PG+TQ LNFF Sbjct: 11 IISAVQEAQYPETDVPEVALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K + +G +I YL+ R L+ V L+D RH Sbjct: 71 D---------QLVFVDVPGYGYAKVSKVQREKFGKMIEEYLTTRQKLQLVIQLVDLRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++++L + I+ TK DK+ Q+ L K + ++ SS+ Sbjct: 122 TEDDVLMYNYLKHFDIPTLIICTKEDKIPKGKVQKHLNNIKNKLD--LEEGDTIVSYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 K + + I + Sbjct: 180 KNNKQQQIWDLIESYL 195 >gi|294155762|ref|YP_003560146.1| cell division GTP-binding protein EngB [Mycoplasma crocodyli MP145] gi|291600315|gb|ADE19811.1| cell division GTP-binding protein EngB [Mycoplasma crocodyli MP145] Length = 196 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 11/197 (5%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + F++ + EI F GRSNVGKSSL+N +VN K+LAR S PGRTQ LN+F Sbjct: 2 YKFIKSSTDKSNWYDHQASEICFWGRSNVGKSSLLNAIVNNKSLARVSKTPGRTQLLNYF 61 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +N+L +VD+PGYGYA+ K D +I YL S+L+ V LLID R Sbjct: 62 --------ENDLSKNIIVDLPGYGYAKISKSQKDKMLKMIDEYLKNSSSLKAVLLLIDSR 113 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+ ID+++ ++L + ++ TKIDKL+ + ++ +K + + Sbjct: 114 HGITNIDREIINYLVSINLPIVLIYTKIDKLNQKEKSQLIKMSKN---EFSINKFNYLFV 170 Query: 192 SSVKRKGIEVLRKAILE 208 SS R+GI+ L K I + Sbjct: 171 SSQTRQGIDELNKNIDD 187 >gi|330718623|ref|ZP_08313223.1| GTP-binding protein YsxC [Leuconostoc fallax KCTC 3537] Length = 162 Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 64/161 (39%), Positives = 86/161 (53%), Gaps = 9/161 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P PEIA GRSNVGKSSL N L+NRK LARTS PG+TQ LNF+ +D Sbjct: 10 ISAVSPAQYPVTNLPEIALVGRSNVGKSSLTNTLINRKGLARTSAQPGKTQTLNFYNVED 69 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 A+ VD+PGYGYA+ KK +++G +I Y++ R+ LR V L+D RH Sbjct: 70 ---------ALYFVDVPGYGYAKVSKKQREAFGEMIETYITSRAQLRGVVSLVDARHAPS 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + D ++ +L V +V TK DK++ K Sbjct: 121 EEDIMMYEWLHYYKVPILVVATKADKIARGKFNHAESVIKK 161 >gi|120609677|ref|YP_969355.1| ribosome biogenesis GTP-binding protein YsxC [Acidovorax citrulli AAC00-1] gi|120588141|gb|ABM31581.1| GTP-binding protein [Acidovorax citrulli AAC00-1] Length = 253 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ LP PE AF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 27 HTARFLTTAAQLHHLPAIHVPEFAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHIN 86 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + + L D+PGYGYA + + W ++V YL R +L + LL D Sbjct: 87 LFALG-----RQGVTDAVLADLPGYGYAAVSRSDKQRWQQVMVNYLVSRESLTGIVLLCD 141 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + + + + ++LTK DKL+ + L T+ Sbjct: 142 PRLGLTELDEALLEAVRPRVEAGLKFLVLLTKADKLTRAEQAKVLSITR-----LQAGGG 196 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S++K++G++ + + + + Sbjct: 197 EVKMFSALKKQGVDEVAQLLWQW 219 >gi|86159103|ref|YP_465888.1| ribosome biogenesis GTP-binding protein YsxC [Anaeromyxobacter dehalogenans 2CP-C] gi|119368789|sp|Q2ILB9|ENGB_ANADE RecName: Full=Probable GTP-binding protein EngB gi|85775614|gb|ABC82451.1| GTP-binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 216 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 67/187 (35%), Positives = 94/187 (50%), Gaps = 3/187 (1%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + P+ PEIAF GRSNVGKSS++N L RK LAR S+ PGRT+ L FF Sbjct: 10 FDKTATRPEEWPRGATPEIAFVGRSNVGKSSMLNALARRKGLARVSSTPGRTRALQFFDL 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 A+ D+PGYGYA+ + D W +I YL +R LR V L++D RH Sbjct: 70 SYRPTPAARPRAIRFCDLPGYGYAKVSRAERDRWTAMIEDYLRDRDVLRAVVLIVDARHA 129 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+D +FL + TK DKL L++ + + A + +P S+ Sbjct: 130 PSESDEDAAAFLVSAGRRLVVAATKTDKLPKARRVLALQQVERAL---GLARGDAVPFSA 186 Query: 194 VKRKGIE 200 V+ G + Sbjct: 187 VEGTGTD 193 >gi|239637529|ref|ZP_04678501.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus warneri L37603] gi|239596747|gb|EEQ79272.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus warneri L37603] Length = 195 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ PE+A SGRSNVGKSS IN ++ RKN+ARTS PG+TQ LNFF Sbjct: 11 IISAVQEAQYPETDVPEVALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + VD+PGYGYA+ K + +G +I YL+ R L+ V L+D RH Sbjct: 71 D---------QLVFVDVPGYGYAKVSKVQREKFGKMIEEYLTTRQKLQLVIQLVDLRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++++L + I+ TK DK+ Q+ L K + ++ SS+ Sbjct: 122 TEDDVLMYNYLKHFDIPTLIICTKEDKIPKGKVQKHLNNIKNKLD--LEEGDTIVSYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 K + + I + Sbjct: 180 KNNKQQQIWDMIESYL 195 >gi|329724700|gb|EGG61206.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis VCU144] Length = 195 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 11/194 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + P G E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ + Sbjct: 13 SAVKKAQYPDTGLTEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNIDE- 71 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH + Sbjct: 72 --------QLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTE 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++++L + ++ TK DK++ Q+ +++ K + + +I SS+K Sbjct: 124 DDVLMYNYLKHFDIPTLVICTKEDKIAKGKLQKHIKRIKDKLE--LESGDNIISYSSIKN 181 Query: 197 KGIEVLRKAILETI 210 + + I I Sbjct: 182 SKQQEIWNFIETYI 195 >gi|94968624|ref|YP_590672.1| small GTP-binding protein [Candidatus Koribacter versatilis Ellin345] gi|119368786|sp|Q1IRA2|ENGB_ACIBL RecName: Full=Probable GTP-binding protein EngB gi|94550674|gb|ABF40598.1| Small GTP-binding protein [Candidatus Koribacter versatilis Ellin345] Length = 203 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 72/196 (36%), Positives = 97/196 (49%), Gaps = 9/196 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P AG PEIAF GRSNVGKSSLIN +V K +A+TS+ PGRTQ +NFF Sbjct: 7 FMLSAADARQFPAAGAPEIAFLGRSNVGKSSLINAIVGSK-IAKTSSTPGRTQTINFFEI 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + P D+PGYGYAR PK+ W I YL ER TL ++D Sbjct: 66 R---RPGKPRPDWIFADLPGYGYARVPKELTAEWPKFIDPYLHERPTLALCVSIVDVSVP 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 ++ D ++ ++L + +V TKID++S + L K K + P S+ Sbjct: 123 PQKKDLELLNWLRHVGRPFVVVGTKIDRVSGNQLRNNLLKLKEELLVEEVV-----PFSA 177 Query: 194 VKRKGIEVLRKAILET 209 G L K I E Sbjct: 178 KGTTGHNELWKKIFEA 193 >gi|27468266|ref|NP_764903.1| GTPase EngB [Staphylococcus epidermidis ATCC 12228] gi|57867148|ref|YP_188811.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis RP62A] gi|251811068|ref|ZP_04825541.1| GTPase [Staphylococcus epidermidis BCM-HMP0060] gi|282875906|ref|ZP_06284773.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis SK135] gi|293366378|ref|ZP_06613057.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis M23864:W2(grey)] gi|38257583|sp|Q8CS80|ENGB_STAES RecName: Full=Probable GTP-binding protein EngB gi|71151869|sp|Q5HNN0|ENGB_STAEQ RecName: Full=Probable GTP-binding protein EngB gi|27315812|gb|AAO04947.1|AE016748_181 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57637806|gb|AAW54594.1| GTP-binding protein, EngB family [Staphylococcus epidermidis RP62A] gi|251805403|gb|EES58060.1| GTPase [Staphylococcus epidermidis BCM-HMP0060] gi|281294931|gb|EFA87458.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis SK135] gi|291319503|gb|EFE59870.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis M23864:W2(grey)] gi|329733782|gb|EGG70108.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis VCU045] gi|329737463|gb|EGG73717.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus epidermidis VCU028] Length = 195 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 11/194 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + P G E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ + Sbjct: 13 SAVKKAQYPDTGLTEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNIDE- 71 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH + Sbjct: 72 --------QLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTE 123 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D ++++L + ++ TK DK++ Q+ +++ K + + +I SS+K Sbjct: 124 DDVLMYNYLKHFDIPTLVICTKEDKIAKGKVQKHIKRIKDKLE--LESGDNIISYSSIKN 181 Query: 197 KGIEVLRKAILETI 210 + + I I Sbjct: 182 SKQQEIWNFIETYI 195 >gi|262066526|ref|ZP_06026138.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium periodonticum ATCC 33693] gi|291379760|gb|EFE87278.1| ribosome biogenesis GTP-binding protein YsxC [Fusobacterium periodonticum ATCC 33693] Length = 194 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 F++ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ + Sbjct: 4 KKADFIKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLI 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++L+ Sbjct: 64 NYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFVLL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D R D ++ +L+ + Y+I+ TKIDKLS + L+ K + +V Sbjct: 114 DIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRLI---FEKEDV 170 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+ KG + + + E +N Sbjct: 171 FFHSSLTNKGRDEILTFMEEKLN 193 >gi|237742955|ref|ZP_04573436.1| GTP-binding protein [Fusobacterium sp. 4_1_13] gi|229430603|gb|EEO40815.1| GTP-binding protein [Fusobacterium sp. 4_1_13] Length = 194 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 14/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 F++ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ + Sbjct: 4 KKADFVKSAVYEKDYPEQLDKIEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQLI 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N+F+ D +VD+PGYG+A+ PK+ WG + RY++ + + V++L+ Sbjct: 64 NYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMERYIASKRK-KLVFVLL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D R D ++ +L+ + Y+I+ TKIDKLS + L+ K + + +V Sbjct: 114 DIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKAIKTRL---VFDNEDV 170 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+ KG + + + +N Sbjct: 171 FFHSSLTNKGRDEILDFMEAKLN 193 >gi|254443449|ref|ZP_05056925.1| GTPase, putative [Verrucomicrobiae bacterium DG1235] gi|198257757|gb|EDY82065.1| GTPase, putative [Verrucomicrobiae bacterium DG1235] Length = 216 Score = 201 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 9/196 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + FL ++ P++ PE+AF GRSNVGKSSL+N+L +K+LA+ S PG T+ LNF Sbjct: 5 SAEFLTSAKDLEDCPRSSLPEVAFIGRSNVGKSSLVNMLTKQKSLAKVSKKPGATKLLNF 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + N LVD+PGYG+A+ K + + YL R+ L+ + L+D Sbjct: 65 FTMNKWWN---------LVDLPGYGFAQVSKGKQVDFNEAVSGYLMGRTQLKLICALVDA 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R+ ++D ++L+ V + IV TK D+ + ++ + + PE+IP Sbjct: 116 RNEPMELDLGFLNWLEDCPVPHVIVFTKTDEEQEDIWRRNMDIYQETLEALELRVPEMIP 175 Query: 191 TSSVKRKGIEVLRKAI 206 SSV R G VL + I Sbjct: 176 CSSVDRAGRGVLLQYI 191 >gi|291542676|emb|CBL15786.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Ruminococcus bromii L2-63] Length = 200 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 105/204 (51%), Gaps = 14/204 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F + A+ F + LP++ PEI FSG SNVGKSSLIN LV RK LAR S PG+T Sbjct: 3 FNEVAFEF--AAGRVDQLPESDMPEIVFSGHSNVGKSSLINKLVQRKALARVSAQPGKTA 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ K+F +VD+PGYGYA+ K D W L+ Y ++ V Sbjct: 61 TINFYKLKEF----------RMVDLPGYGYAKVSKAEKDRWAKLVEGYFAQDRQRPLVIQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++D RH D + FL + ++ VLTK DKL T ++ +E K + H Sbjct: 111 ILDLRHPPTDDDLHMIDFLYRGGFNFAAVLTKSDKLKKTAFEKQIEYYKDIFST--IEHV 168 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 +IP S+ G + +RK I +I Sbjct: 169 PLIPFSAQTGFGNDEIRKLIETSI 192 >gi|221059611|ref|XP_002260451.1| probable GTP-binding protein [Plasmodium knowlesi strain H] gi|193810524|emb|CAQ41718.1| probable GTP-binding protein, putative [Plasmodium knowlesi strain H] Length = 965 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 7/201 (3%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K I + ++ LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ + Sbjct: 108 KPRMILYKTAIQVSELPLPKYPEIAFIGRSNSGKSTLINELCGRTNKAKVSKLPGCTKEI 167 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 +F+ L LVD+PGYG+A + ++ W + YL R L+ V++LI Sbjct: 168 HFYKIAKPCLL-------CLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRKNLKKVFVLI 220 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 DCR G+K D+++ F D+ + YQIV +K D L+ ++ I + + Sbjct: 221 DCRVGLKTSDKELLHFFDRYNIKYQIVFSKCDLLNTKDLAVKIQIANEEIACFKNLEAPI 280 Query: 189 IPTSSVKRKGIEVLRKAILET 209 IP SS+KR+ + LRK I Sbjct: 281 IPLSSLKRQNLNELRKEIARY 301 >gi|303256479|ref|ZP_07342493.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderiales bacterium 1_1_47] gi|302859970|gb|EFL83047.1| ribosome biogenesis GTP-binding protein YsxC [Burkholderiales bacterium 1_1_47] Length = 237 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 3/203 (1%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ V E+ LP+ PEIAF+GRSN GKS+ IN+L + LA +S PGRTQ LNF Sbjct: 31 SARFVMSVSELMGLPETELPEIAFAGRSNAGKSTTINVLCRQSRLAFSSKTPGRTQLLNF 90 Query: 71 FVPKDFSNLKNNL-PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + P LVD+PGYGYA+A + +W GL+ Y+ +R L + L++D Sbjct: 91 FELSLKGEIPRQRIPECFLVDLPGYGYAKAAPETRRNWEGLVGGYVQQRPQLMGMVLVMD 150 Query: 130 CRHGVKQIDQDVFSFL-DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 R D+ + FL + + ++L K D+L ++ L K H V Sbjct: 151 ARRPFMPADEFLLDFLSVRPDLKLHLLLNKADQLKTMEKRQVLNTVKDRALAMGN-HVSV 209 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 S +K++G+E L+ + +N Sbjct: 210 QLFSGLKKEGVEQLQNVLCTWLN 232 >gi|303232718|ref|ZP_07319403.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium vaginae PB189-T1-4] gi|302481204|gb|EFL44279.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium vaginae PB189-T1-4] Length = 195 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 67/197 (34%), Positives = 98/197 (49%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F LP + E+ F GRSNVGKSSL+N L+ RK LAR S+ PG+T ++NFF Sbjct: 10 FEAAYGTASQLPPSTTAEVVFCGRSNVGKSSLLNKLLGRKALARVSSQPGKTANINFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N+ + +D+PGYG+A+ K W LI Y + + V L+D R Sbjct: 68 --------NVDGVRFIDLPGYGFAKVSKTERSRWADLISGYFDQNRSFNLVISLVDIRID 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +++D + FL A+ + + TK DKL+ AQ + K + P + I TS+ Sbjct: 120 AQELDMHMIDFLKDAAIPFVVAFTKADKLTRAKAQANVSKLTKALHIEPE---QAIITSA 176 Query: 194 VKRKGIEVLRKAILETI 210 K GI LR+ I + Sbjct: 177 EKGTGIPQLRRRIEAAV 193 >gi|329766944|ref|ZP_08258472.1| ribosome biogenesis GTP-binding protein YsxC [Gemella haemolysans M341] gi|328837669|gb|EGF87294.1| ribosome biogenesis GTP-binding protein YsxC [Gemella haemolysans M341] Length = 198 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 98/196 (50%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PE+A GRSNVGKSS IN ++ RKN AR S+ PG+T+ LNFF Sbjct: 12 LISAVSKKQYPEHDKPEVAMCGRSNVGKSSFINTILERKNYARVSSKPGKTRTLNFFDVD 71 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + LVD+PGYGYA+ K + +IV Y + L V LID RH Sbjct: 72 N---------KLVLVDVPGYGYAKLSKPEKEKLYDMIVEYFTNSENLGFVLHLIDSRHKP 122 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL+ + + IV+TKIDK+S + K + +IP SSV Sbjct: 123 SQDDIEMNEFLNYYEIPFVIVMTKIDKISKNELVKNTGIIKRELDLTNNMA--IIPFSSV 180 Query: 195 KRKGIEVLRKAILETI 210 + G E + I + + Sbjct: 181 TKIGKEQVLNEIAKVL 196 >gi|223044083|ref|ZP_03614122.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus capitis SK14] gi|222442477|gb|EEE48583.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus capitis SK14] Length = 195 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNFF Sbjct: 11 IISAVQEAQYPETNLSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G +I YL++R LR V L+D RH Sbjct: 71 E---------QLIFVDVPGYGYAKVSKVQREKFGKMIEEYLTQRENLRLVIQLVDLRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++++L + ++ TK DK++ Q+ L+ K + P +I SS+ Sbjct: 122 TEDDVLMYNYLKHFDIPTLVICTKEDKIAKGKVQKHLKNIKDKLELEPE--DSIISYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 K + + I + Sbjct: 180 KNNKQQQIWDLISTYL 195 >gi|299143345|ref|ZP_07036425.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517830|gb|EFI41569.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 201 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 70/193 (36%), Positives = 99/193 (51%), Gaps = 12/193 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+ E AF+GRSNVGKSS IN ++ RKNLARTS+ PG+T+ +NF+ D Sbjct: 12 AVHKNQYPEMDLFEFAFAGRSNVGKSSFINSMLGRKNLARTSSTPGKTRTINFYRVND-- 69 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + LVD+PGYGYAR K SW +I YL +R L V LL+D RH + Sbjct: 70 -------DLRLVDLPGYGYARVSKTEKSSWSKIINEYLDDRENLLEVVLLVDIRHEPTEQ 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D ++ ++ K S ++ TK DK+S + K + +IP SSV + Sbjct: 123 DLQMYEYILSKGYSGIVIATKADKISRGQYAGHISKIAKKLSIKNRDM--IIPFSSVDKN 180 Query: 198 GIEVLRKAILETI 210 ++ + I E I Sbjct: 181 MVDEMW-FIFEDI 192 >gi|303291125|ref|XP_003064849.1| predicted protein [Micromonas pusilla CCMP1545] gi|226453875|gb|EEH51183.1| predicted protein [Micromonas pusilla CCMP1545] Length = 196 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 91/197 (46%), Gaps = 12/197 (6%) Query: 13 IFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 F+ + P G PE+A GRSNVGKSSL+N+L + A S+ PG TQ +N + Sbjct: 6 QFVSATEDADDCPAPDGLPEVALIGRSNVGKSSLLNLLTEGASGALVSSKPGTTQRINHY 65 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + +VD+PGYGYA A + W Y RS L V LLID Sbjct: 66 LVNH---------KWWIVDLPGYGYAEATEDETAKWEAFTKDYFVTRSNLAGVLLLIDAS 116 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVI 189 + D + +L + V + IV TK D+ P + +E + + + P +I Sbjct: 117 VPPQAKDAEYADWLIENNVPFTIVFTKCDRDKPGMPSVEENKAEFEARLEERWHRSPSMI 176 Query: 190 PTSSVKRKGIEVLRKAI 206 PTSSV G E + K I Sbjct: 177 PTSSVNADGREDVLKFI 193 >gi|319761545|ref|YP_004125482.1| ribosome biogenesis gtp-binding protein ysxc [Alicycliphilus denitrificans BC] gi|317116106|gb|ADU98594.1| ribosome biogenesis GTP-binding protein YsxC [Alicycliphilus denitrificans BC] Length = 230 Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ LP PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N Sbjct: 23 HTARFLTTAAQLSQLPAITVPEIAFVGRSNAGKSTCINTLTQQRQLAFASKKPGRTQHIN 82 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K L D+PGYGYA + + W ++ YL R L + LL D Sbjct: 83 LFALG-----KQGATDAVLADLPGYGYAAVSRSDKQRWQQVMANYLVSRQGLTGIVLLCD 137 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + ++ + + ++LTK DKL+ + L I Sbjct: 138 PRLGLTELDEALLEVVRPRVEQGLKFLVLLTKADKLTRAEQAKALS-----IARLQAGGG 192 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S++KR+G++ + + + + Sbjct: 193 EVRMFSALKRQGVDEVAQLLWQW 215 >gi|307265818|ref|ZP_07547369.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter wiegelii Rt8.B1] gi|306919213|gb|EFN49436.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacter wiegelii Rt8.B1] Length = 194 Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 12/195 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +R PK P+I GRSNVGKS+LIN ++NRKNLA+TS+ PG+T+ +NF++ Sbjct: 9 VRTAFNEEQYPKDNFPQIVIVGRSNVGKSTLINTVLNRKNLAKTSSKPGKTRGINFYLIN 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + LVD+PGYGYA+ K+ W I +L+ LR LLID R Sbjct: 69 N---------GFYLVDLPGYGYAKVSKEMKKQWAHNIETFLNTSKYLRHALLLIDIRRTP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + ++ K + + +VLTK DK++ + + + + + + +I SS+ Sbjct: 120 TEDDFLMVNWFRHKELPFTVVLTKADKVNKSEI---VNAVEGICKTFNIDSERIIVFSSL 176 Query: 195 KRKGIEVLRKAILET 209 K+ G+ + E Sbjct: 177 KKMGVSQVLSIFDEW 191 >gi|256827738|ref|YP_003151697.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Cryptobacterium curtum DSM 15641] gi|256583881|gb|ACU95015.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Cryptobacterium curtum DSM 15641] Length = 196 Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 97/198 (48%), Gaps = 13/198 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + +P + PEI+F GRSNVGKSSL+N + +RK+L + S PG TQ++NFF Sbjct: 8 FVASYAQADQVPVSIRPEISFVGRSNVGKSSLMNKVFSRKDLVKVSQKPGCTQNINFFNV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA+ K + W L+ Y + LID RH Sbjct: 68 GEVD----------FVDLPGYGYAKVSKAEMGRWRPLVEGYFKQDRRFALCVSLIDIRHE 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 V +D+ + FL + + I TK DKL S + + + + V+P S Sbjct: 118 VSDLDKQMIGFLQSHEIPFMIAFTKADKLSSKSKVRAQVATLCKQLAA--AGDVVVLPVS 175 Query: 193 SVKRKGIEVLRKAILETI 210 S+K GI LR I + I Sbjct: 176 SLKGDGIADLRSLIDDAI 193 >gi|330823414|ref|YP_004386717.1| GTP-binding protein engB [Alicycliphilus denitrificans K601] gi|329308786|gb|AEB83201.1| GTP-binding protein engB [Alicycliphilus denitrificans K601] Length = 230 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ LP PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N Sbjct: 23 HTARFLTTAAQLNQLPAITVPEIAFVGRSNAGKSTCINTLTQQRQLAFASKKPGRTQHIN 82 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K L D+PGYGYA + + W ++ YL R L + LL D Sbjct: 83 LFALG-----KQGATDAVLADLPGYGYAAVSRSDKQRWQQVMANYLVSRQGLTGIVLLCD 137 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + ++ + + ++LTK DKL+ + L I Sbjct: 138 PRLGLTELDEALLEVVRPRVEQGLKFLVLLTKADKLTRAEQAKALS-----IARLQAGGG 192 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S++KR+G++ + + + + Sbjct: 193 EVRMFSALKRQGVDEVAQLLWQW 215 >gi|67458477|ref|YP_246101.1| GTPase EngB [Rickettsia felis URRWXCal2] gi|75537053|sp|Q4UNC2|ENGB_RICFE RecName: Full=Probable GTP-binding protein EngB gi|67004010|gb|AAY60936.1| Hypothetical GTP-binding protein [Rickettsia felis URRWXCal2] Length = 212 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 104/203 (51%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ Sbjct: 18 FRHQAKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQ 77 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + W LI YL +LR V LL Sbjct: 78 INFFNLAD---------KLIIVDLPGYGFANVPISVKEQWEVLISYYLRNSYSLRLVNLL 128 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ ++ L Sbjct: 129 IDSRRGIKENDKKVAELLLANKREFQIIFTKSDKVTD---RKNLNDEAQNFLATLNYSCN 185 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ SS ++G L+ ++ + I Sbjct: 186 VMYVSSRSKEGARELKASLAKCI 208 >gi|255551060|ref|XP_002516578.1| GTP-binding protein engB, putative [Ricinus communis] gi|223544398|gb|EEF45919.1| GTP-binding protein engB, putative [Ricinus communis] Length = 317 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 101/204 (49%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F Sbjct: 119 FVKSSVSTEDCPNDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRV 178 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA AP++ W Y RSTL V+LLID Sbjct: 179 ND---------SWYLVDLPGYGYAAAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIP 229 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 K+ID + S+L + + ++ TK DK E + + LIR++ P Sbjct: 230 AKKIDLEYASWLGQNQIPMTLIFTKCDKRKKKKNGGKRPDENVNDFQELIRSFFKTAPPW 289 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TSS +G + + + + NY Sbjct: 290 IMTSSTTNQGRDEMLLHMAQLRNY 313 >gi|298714913|emb|CBJ27669.1| YihA4, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 677 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 108/198 (54%), Gaps = 12/198 (6%) Query: 14 FLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++G + LP + PE AF GRSNVGKSSLIN++ NRK LA TS PG+TQ N+F+ Sbjct: 419 FVKGAVSMATLPKEPVLPEAAFIGRSNVGKSSLINMVCNRKALAFTSKRPGKTQQFNYFL 478 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 N A LVD+PG GYA+ P+K W L Y++ RS+LR ++ LID RH Sbjct: 479 MN-----NNTENAFYLVDLPGMGYAKVPEKQRKEWSTLFRSYITRRSSLRVLFHLIDGRH 533 Query: 133 GVKQIDQDVFSFLDKKAVS----YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 G D + + + + Y +VLTK DK + +++ LE +R + V Sbjct: 534 GPVGQDHAIMKLMAE--LPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRTPV 591 Query: 189 IPTSSVKRKGIEVLRKAI 206 + TS+ + G + + + + Sbjct: 592 VLTSAASKLGRDGMWRYL 609 >gi|297811265|ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] gi|297319353|gb|EFH49775.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata] Length = 318 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 104/204 (50%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +++ + P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F Sbjct: 120 YVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRI 179 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA AP + W Y RSTL V+LL+D Sbjct: 180 ND---------KWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIP 230 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 VKQID + S+L + V ++ TK DK +E +++ + LI+ + P Sbjct: 231 VKQIDLEYASWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEENIKEFQDLIQGFFETTPPW 290 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TSSV +G + + + + NY Sbjct: 291 IMTSSVTNQGRDEILLHMAQLRNY 314 >gi|21592799|gb|AAM64748.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 318 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 102/204 (50%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +++ + P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F Sbjct: 120 YVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRI 179 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA AP + W Y RSTL V+LL+D Sbjct: 180 ND---------KWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIP 230 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 VK ID + S+L + V ++ TK DK + +++ + LI+ + P Sbjct: 231 VKPIDLEYASWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFFETTPPW 290 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TSSV +G + + + + NY Sbjct: 291 IMTSSVTNQGRDEILLHMAQLRNY 314 >gi|222151554|ref|YP_002560710.1| hypothetical protein MCCL_1307 [Macrococcus caseolyticus JCSC5402] gi|254783205|sp|B9E746|ENGB_MACCJ RecName: Full=Probable GTP-binding protein EngB gi|222120679|dbj|BAH18014.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 195 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P G E+A +GRSNVGKSS IN ++ RK++AR S+ PG+TQ LNFF Sbjct: 11 IISAVKPDQYPDTGLKEVALAGRSNVGKSSFINTMIGRKSMARISSKPGKTQTLNFFNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + WG +I Y++ R L CV L+D RH Sbjct: 71 E---------QLVFVDVPGYGYAKVSKTERERWGKMIETYITTRDNLACVIQLVDIRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ ++ FL + ++ TK DK+ Q+ L+ K + + +I +++ Sbjct: 122 TEDDRLMYDFLKHYEIPTIVIATKEDKIPKGKIQKHLKIIKQDLDM--DSSDTLISYTAL 179 Query: 195 KRKGIEVLRKAILETI 210 + ++ AI + + Sbjct: 180 SKDKNPMIFNAIEKYL 195 >gi|254483342|ref|ZP_05096573.1| putative GTPase [marine gamma proteobacterium HTCC2148] gi|214036437|gb|EEB77113.1| putative GTPase [marine gamma proteobacterium HTCC2148] Length = 184 Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 10/179 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +AF+GRSN GKSS IN L N K LA+TS PGRTQ +NFF + LVD+ Sbjct: 1 MAFAGRSNAGKSSAINSLTNNKKLAKTSKTPGRTQLINFFELS---------TSQRLVDL 51 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYG+A+ P W + YL++R LR + LL+D RH ++ D+ + ++ + Sbjct: 52 PGYGFAKVPVAVKKEWTKQLENYLAKRQCLRGMILLMDVRHPLQPFDEQMLNWALTAHMP 111 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I+LTK DKL A +L + ++ + A V S++K G + L + + + Sbjct: 112 VHILLTKADKLKKGPANNSLLGVRKAMKAH-EALVSVQLFSALKHSGHQQLVEVLDGWL 169 >gi|260891335|ref|ZP_05902598.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia hofstadii F0254] gi|260858718|gb|EEX73218.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia hofstadii F0254] Length = 196 Score = 199 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 14/203 (6%) Query: 10 SAWIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 S F++ P+ E +F GRSNVGKSSLIN L RKNLARTS PGRTQ + Sbjct: 4 SKSEFVKSAVVEKDYPEFNNTVEFSFIGRSNVGKSSLINSLTKRKNLARTSKTPGRTQLI 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N+F+ + + VD+PGYG+A+ P+ +WG I YL + V+LL+ Sbjct: 64 NYFLINN---------KIHFVDLPGYGFAKVPEAVKRNWGKTIESYLVSNRE-KVVFLLL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D R D ++ +L+ + Y I+ TK DKLS + L++ + + + +V Sbjct: 114 DLRRVPSNEDMEMLKWLEHFEIEYYIIFTKADKLSNNEKFKQLKEIR---KKLVFKNEDV 170 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 SS+K G + L I E IN Sbjct: 171 FFYSSLKNTGRKELLDFIEERIN 193 >gi|295112118|emb|CBL28868.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Synergistetes bacterium SGP1] Length = 195 Score = 199 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 65/185 (35%), Positives = 96/185 (51%), Gaps = 10/185 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP PE+ +GRSNVGKSSLIN + + LA PG+T+ +NF+ ++ Sbjct: 13 QQLPPEECPEVVIAGRSNVGKSSLINAFLGIR-LAHVGATPGKTRSINFYRVEE------ 65 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + LVD+PGYGYA K D+W LI Y+ R+ LR V L+D RHG+ D ++ Sbjct: 66 DERPFRLVDLPGYGYASRSKAEKDAWLRLISAYVEGRAALRLVCHLVDFRHGLLANDLEL 125 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 +L + +V TK DKL+ + ++ + + + I TS+ KR G+E Sbjct: 126 QEWLVRCGRDILVVFTKADKLARGRWK---DRVRQYVARGLHSVDLPIVTSAEKRVGVEE 182 Query: 202 LRKAI 206 LR I Sbjct: 183 LRSFI 187 >gi|15239069|ref|NP_196709.1| GTP binding [Arabidopsis thaliana] gi|7573405|emb|CAB87708.1| putative GTP-binding protein [Arabidopsis thaliana] gi|16648724|gb|AAL25554.1| AT5g11480/F15N18_70 [Arabidopsis thaliana] gi|23505999|gb|AAN28859.1| At5g11480/F15N18_70 [Arabidopsis thaliana] gi|332004301|gb|AED91684.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 318 Score = 199 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 102/204 (50%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +++ + P G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F Sbjct: 120 YVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRI 179 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D LVD+PGYGYA AP + W Y RSTL V+LL+D Sbjct: 180 ND---------KWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIP 230 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 VK ID + S+L + V ++ TK DK + +++ + LI+ + P Sbjct: 231 VKPIDLEYASWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFFETTPPW 290 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TSSV +G + + + + NY Sbjct: 291 IMTSSVTNQGRDEILLHMAQLRNY 314 >gi|325180055|emb|CCA14457.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 318 Score = 199 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 115/201 (57%), Gaps = 7/201 (3%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 ++ + + LP PE+AF+GRSN GKSSLIN ++ + L RTS PGRTQ Sbjct: 107 FQANSRLIVSASDPSDLPAWNIPEVAFAGRSNCGKSSLINAILGQPGLVRTSKTPGRTQL 166 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVY 125 LNFF K +LPAM++VDMPGYG+A+ PK VD+W L+ Y+ R L+ ++ Sbjct: 167 LNFFSVG---GKKGSLPAMSVVDMPGYGFAKPPKDVVDTWDKLVGGYIERRQAGLLKNLF 223 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--T 183 +L+D R G+ +DQ+ FL++ YQI+ TKID + ++ + + + + Sbjct: 224 VLLDARRGITTLDQEFLDFLEEMESLYQIIFTKIDAVPTAELEKNIREVLNMKELFSRRG 283 Query: 184 AHPEVIPTSSVKRKGIEVLRK 204 +P V+ TS+ + GI +++ Sbjct: 284 MNPIVLATSTKESFGIRQMQQ 304 >gi|222109904|ref|YP_002552168.1| ribosome biogenesis gtp-binding protein ysxc [Acidovorax ebreus TPSY] gi|254783195|sp|B9MDD6|ENGB_ACIET RecName: Full=Probable GTP-binding protein EngB gi|221729348|gb|ACM32168.1| GTP-binding protein HSR1-related [Acidovorax ebreus TPSY] Length = 218 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ LP PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N Sbjct: 5 HTARFLTTAAQLHHLPAIEVPEIAFVGRSNAGKSTCINTLTQQRQLAFASKKPGRTQHIN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K L D+PGYGYA + + W +++ YL R +L + LL D Sbjct: 65 LFALG-----KQGATDAVLADLPGYGYAAVSRSDKLRWQQVMLSYLVSRESLTAIVLLCD 119 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + + + + + ++LTK DKL+ + L T+ Sbjct: 120 PRLGLTELDEALLNAVRPRVEAGLKFLVLLTKADKLTRAEQAKALSITR-----LQAGGG 174 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S++K++G++ + + + + Sbjct: 175 EVRMFSALKKQGVDEVAQLLWQW 197 >gi|167751031|ref|ZP_02423158.1| hypothetical protein EUBSIR_02016 [Eubacterium siraeum DSM 15702] gi|167655949|gb|EDS00079.1| hypothetical protein EUBSIR_02016 [Eubacterium siraeum DSM 15702] gi|291556919|emb|CBL34036.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Eubacterium siraeum V10Sc8a] Length = 206 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 14/190 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ F +PK+ EIAFSGRSNVGKSSLIN ++NRK+LAR S+ PG+T Sbjct: 3 FNKAE--FYTSYGLFSQIPKSEKAEIAFSGRSNVGKSSLINKILNRKSLARVSSMPGKTV 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ + + D+PGYGYA+ K W GL+ YL++ L V+ Sbjct: 61 TINFYSVDN----------IYFADLPGYGYAKVSKSEKQRWAGLVEGYLADDRNLTLVFQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH D + +FL + + +VLTK DKLS E I H Sbjct: 111 LVDFRHPPTADDVMMINFLIDNGIPFVVVLTKADKLSKKERAARRESLMNEIPCAEDIH- 169 Query: 187 EVIPTSSVKR 196 +I S++ Sbjct: 170 -MIEFSAMNG 178 >gi|328952831|ref|YP_004370165.1| GTP-binding protein engB [Desulfobacca acetoxidans DSM 11109] gi|328453155|gb|AEB08984.1| GTP-binding protein engB [Desulfobacca acetoxidans DSM 11109] Length = 199 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 67/200 (33%), Positives = 95/200 (47%), Gaps = 9/200 (4%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ +I LP PE+AF GRSNVGKSSLIN L++R+NL RTS+ PG TQ +N+ Sbjct: 8 SAEFVVSAHQIEQLPGGVLPEVAFWGRSNVGKSSLINALLHRQNLVRTSSRPGCTQAINY 67 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F+ VD+PGYGYA+AP + W LI YL + LR V L+D Sbjct: 68 FLVN---------RVWHFVDLPGYGYAQAPLPVKEKWLRLISTYLETQKRLRAVVWLLDA 118 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + D L +VLTK DK+ + + + I Sbjct: 119 RRQPGPEELDWLDRLRSWRQEVVVVLTKADKIKRGQRDRRQSEIAAQLAPSGVKAQDFIW 178 Query: 191 TSSVKRKGIEVLRKAILETI 210 S++ ++G L I+ + Sbjct: 179 FSTLTQEGRRELWGQIMRFL 198 >gi|257126668|ref|YP_003164782.1| ribosome biogenesis GTP-binding protein YsxC [Leptotrichia buccalis C-1013-b] gi|257050607|gb|ACV39791.1| small GTP-binding protein [Leptotrichia buccalis C-1013-b] Length = 195 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 14/202 (6%) Query: 10 SAWIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 + F++ P E +F GRSNVGKSSLIN L RK+LARTS PGRTQ + Sbjct: 4 NKSEFVKSAVVEKDYPDFNNIVEFSFIGRSNVGKSSLINSLTKRKSLARTSKTPGRTQLI 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N+F+ D + VD+PGYG+A+ P +WG I YL + V+LL+ Sbjct: 64 NYFLIND---------KIHFVDLPGYGFAKVPDAVKKNWGKTIESYLISNRE-KVVFLLL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D R D ++ +L+ + Y I+ TK DKLS + L++ + + + +V Sbjct: 114 DLRRVPSNEDMEMLKWLEHFGIEYYIIFTKADKLSNNEKFKQLKEIR---KKLVFKNEDV 170 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 SS+K G E L I + I Sbjct: 171 FFYSSLKNTGREELLNFIGKRI 192 >gi|194335477|ref|YP_002017271.1| GTP-binding protein HSR1-related [Pelodictyon phaeoclathratiforme BU-1] gi|238693375|sp|B4SC74|ENGB_PELPB RecName: Full=Probable GTP-binding protein EngB gi|194307954|gb|ACF42654.1| GTP-binding protein HSR1-related [Pelodictyon phaeoclathratiforme BU-1] Length = 193 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 69/197 (35%), Positives = 99/197 (50%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP+ PEI F+GRSNVGKS+L+N L K LA+TS PG+T+ +N+F+ Sbjct: 8 FHISVSALSGLPEDSFPEIVFAGRSNVGKSTLLNSLTGVKGLAKTSATPGKTRLINYFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYGYA WG L+ Y+ +R ++ V LL+D RH Sbjct: 68 N---------RDVYFVDLPGYGYAAVGHAEKALWGNLLSSYIIQRRSISLVVLLLDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 Q D+ + SFL+ Y IVLTK DKL+ + T ++ + ++ SS Sbjct: 119 AMQSDRAMISFLESHDRPYGIVLTKYDKLTQKEKVQ----TGRIMESCAAKAKFIVNYSS 174 Query: 194 VKRKGIEVLRKAILETI 210 KG L + I Sbjct: 175 FSGKGKSELLAHFDQYI 191 >gi|315658065|ref|ZP_07910937.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus lugdunensis M23590] gi|315496394|gb|EFU84717.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus lugdunensis M23590] Length = 202 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 97/193 (50%), Gaps = 11/193 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L + P EIA SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 18 LISAVKEEQYPDTNLSEIALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY--- 74 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 N + VD+PGYGYA+ K + +G +I Y++ R LR V L+D RH Sbjct: 75 ------NIDQQLIFVDVPGYGYAKVSKSQREKFGKMIEEYITTRENLRLVIQLVDLRHDP 128 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++++L + ++ TK DK+ Q+ L+ K + +I SS+ Sbjct: 129 TQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHLKNIKEKLD--LEDEDNIISYSSI 186 Query: 195 KRKGIEVLRKAIL 207 K + + + Sbjct: 187 KNSRQQQIWNLLE 199 >gi|225874516|ref|YP_002755975.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium capsulatum ATCC 51196] gi|254783179|sp|C1F4C3|ENGB_ACIC5 RecName: Full=Probable GTP-binding protein EngB gi|225791507|gb|ACO31597.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium capsulatum ATCC 51196] Length = 211 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 62/195 (31%), Positives = 88/195 (45%), Gaps = 8/195 (4%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 F+R P PE AF GRSNVGKSSLIN L+ K A+ S+ PGRT+ +NFF Sbjct: 5 PKFMRSAMATEHFPPVTAPEFAFLGRSNVGKSSLINALLGSKQ-AKVSSTPGRTRAINFF 63 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 ++ + P D+PGYGYA+ K W I YL+ER +L L+D Sbjct: 64 SLT--TSPERQQPNFLFADLPGYGYAKISKSISAEWPKFIEPYLAERPSLALCLCLVDSN 121 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 + D + FL Y +V TK D+LS + + + ++ Sbjct: 122 IPPQPSDAQLTEFLRSIGRPYLVVATKADRLSGNGRTKAKQTLSRALEA-----ENLLLC 176 Query: 192 SSVKRKGIEVLRKAI 206 S+ G++ L I Sbjct: 177 SAKTGLGMKELWGEI 191 >gi|257463900|ref|ZP_05628286.1| GTP-binding protein [Fusobacterium sp. D12] gi|317061429|ref|ZP_07925914.1| GTP-binding protein [Fusobacterium sp. D12] gi|313687105|gb|EFS23940.1| GTP-binding protein [Fusobacterium sp. D12] Length = 204 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 14/198 (7%) Query: 14 FLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +L+ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ +NFF+ Sbjct: 8 YLKSAVYEKDYPERLNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQLINFFI 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +VD+PGYG+A+ PK WG I RY+ T + V++L+D R Sbjct: 68 INQ---------EFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISART-KLVFVLLDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D ++ +LD + ++I+ TK DK+S L++ + I + + +V S Sbjct: 118 IPSEEDMEMLRWLDFHNLPFKIIFTKTDKISNNEKFRLLKEIRKKIEFH---NEDVFFYS 174 Query: 193 SVKRKGIEVLRKAILETI 210 S+ KG E + + + +T+ Sbjct: 175 SLSHKGREEVLQFMEDTL 192 >gi|119358159|ref|YP_912803.1| ribosome biogenesis GTP-binding protein YsxC [Chlorobium phaeobacteroides DSM 266] gi|166225950|sp|A1BJ02|ENGB_CHLPD RecName: Full=Probable GTP-binding protein EngB gi|119355508|gb|ABL66379.1| GTP-binding protein, HSR1-related protein [Chlorobium phaeobacteroides DSM 266] Length = 192 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + LP PEI F+GRSNVGKS+L+N L K LA+TS+ PG+T+ +NFF+ Sbjct: 8 FYISAAALSGLPDLQIPEIVFAGRSNVGKSTLLNSLAGIKGLAKTSSTPGKTRLINFFLV 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 A VD+PGYG+A + ++W L+ Y+ RS + V LL+D RH Sbjct: 68 N---------KAFFFVDLPGYGFAAVGHEQHEAWKKLLTTYIERRSAITLVVLLVDSRHP 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 Q D+++ +L Y IVLTK DKL+ + + + ++ + ++ SS Sbjct: 119 AMQSDREMIDYLTYLGKPYGIVLTKDDKLTQSQRIKA----RRVMESSALNAEFIVNYSS 174 Query: 194 VKRKGIEVLRKAILETI 210 K L + + I Sbjct: 175 FSSKARLELLAHLAQYI 191 >gi|304316363|ref|YP_003851508.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777865|gb|ADL68424.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 200 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 15/195 (7%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 P G +IA GRSNVGKSS IN +VNRKN AR S PG+TQ +NF++ + Sbjct: 11 AAYNKNQYPDDGLTQIAVIGRSNVGKSSFINTIVNRKNFARVSQKPGKTQGINFYLVNN- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + LVD+PGYGYA K+ W I YL+ L+ +L+D RH Sbjct: 70 --------SFYLVDLPGYGYAEVSKEMKKQWSINIETYLNVSEYLKGAIMLVDIRHKPTD 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + ++L + ++Y +V TK DKL+ Q +L + +++P SS+K+ Sbjct: 122 DDVLMMNYLKHRNLNYVVVATKSDKLNRQEIQRSLNVISETLE---VDKGKIVPFSSLKK 178 Query: 197 KGIEVL---RKAILE 208 G++ + +ILE Sbjct: 179 TGVDNIYTYLDSILE 193 >gi|239947151|ref|ZP_04698904.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia endosymbiont of Ixodes scapularis] gi|239921427|gb|EER21451.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia endosymbiont of Ixodes scapularis] Length = 212 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 104/203 (51%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ GV I +P PEIAF G+SNVGKS LIN++ N KNLA+ SN PGRT+ Sbjct: 18 FRHQAKFVAGVMNINQIPNFSLPEIAFVGKSNVGKSRLINMICNNKNLAKVSNTPGRTRQ 77 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + W LI YL LR V LL Sbjct: 78 INFFNLAD---------KLIIVDLPGYGFANVPISVKEQWEVLISYYLRNSHNLRLVNLL 128 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ + L Sbjct: 129 IDSRRGIKENDKKVAELLLANKREFQIIFTKSDKVTD---HKNLNDEAQNFLATLNYSCN 185 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ SS ++G+ L+ ++ + I Sbjct: 186 VMYVSSRSKEGVRELKASLAKCI 208 >gi|319942202|ref|ZP_08016518.1| hypothetical protein HMPREF9464_01737 [Sutterella wadsworthensis 3_1_45B] gi|319804255|gb|EFW01147.1| hypothetical protein HMPREF9464_01737 [Sutterella wadsworthensis 3_1_45B] Length = 222 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 3/203 (1%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F ++ LP PEIAF+GRSN GKS+ IN+L + LA S PGRTQ +NF Sbjct: 6 SARFQISAAKLSGLPTELEPEIAFAGRSNAGKSTTINVLTRQTRLAFASKTPGRTQLVNF 65 Query: 71 FVP-KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + +N + LVD+PGYG+A+A + SW L+ Y++ R LR + +++D Sbjct: 66 FELSRKIDGGRNRVVVGRLVDLPGYGFAKANEAVRSSWSDLVGGYIAGRRQLRGLVIVMD 125 Query: 130 CRHGVKQIDQDVFSFLDKK-AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 R D+ + F+ ++ V +L K D++ + TL + + V Sbjct: 126 SRRPFMPTDEWLIEFMKQRPEVKMLWLLNKCDQIKTQERRTTLRAVEKRAAEF-GDRVTV 184 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 S +KR+G++ L K + +N Sbjct: 185 QFFSGLKREGVDELAKTLETWLN 207 >gi|34580908|ref|ZP_00142388.1| hypothetical GTP-binding protein [Rickettsia sibirica 246] gi|28262293|gb|EAA25797.1| hypothetical GTP-binding protein [Rickettsia sibirica 246] Length = 212 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 103/203 (50%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ Sbjct: 18 FRHQAKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQ 77 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + WG LI YL LR V LL Sbjct: 78 INFFNLAD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLL 128 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ + L Sbjct: 129 IDSRRGIKENDKKVADLLLANKREFQIIFTKSDKVTD---HKNLHDEAQNFLATLNYSCN 185 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ S+ ++G L+ ++ + I Sbjct: 186 VMYVSNRSKEGARELKASLAKCI 208 >gi|121611742|ref|YP_999549.1| ribosome biogenesis GTP-binding protein YsxC [Verminephrobacter eiseniae EF01-2] gi|121556382|gb|ABM60531.1| GTP-binding protein, HSR1-related [Verminephrobacter eiseniae EF01-2] Length = 228 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ LP PEIAF GRSN GKS+ IN L +K LA S PGRTQH+N Sbjct: 25 HTAKFLTTAAQLHHLPPLAVPEIAFVGRSNAGKSTCINTLTQQKQLAFASKKPGRTQHIN 84 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + + L D+PGYGYA + + W ++V YL R L + LL D Sbjct: 85 LFALG-----RQGVMDAVLADLPGYGYAAVSRSDKMRWQQVMVNYLVSRPGLTGIVLLCD 139 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ +D+ + L ++ + + IVLTK DKL+ + L T+ Sbjct: 140 PRLGLTGLDEALLEVLRPRVQQGLKFLIVLTKADKLTRAEQAKALSVTR-----LQAGGG 194 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 +V S++K++G++ + + + Sbjct: 195 QVRLFSALKKQGVDEVAWLLWQW 217 >gi|228475204|ref|ZP_04059930.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus hominis SK119] gi|314936222|ref|ZP_07843569.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus hominis subsp. hominis C80] gi|228270815|gb|EEK12217.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus hominis SK119] gi|313654841|gb|EFS18586.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus hominis subsp. hominis C80] Length = 196 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 11/197 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ EIA SGRSNVGKSS IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 11 MISAVKEEQYPETNLTEIALSGRSNVGKSSFINSMIGRKNMARTSQQPGKTQTLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G +I YL++R L V L+D RH Sbjct: 71 E---------QLIFVDVPGYGYAKVSKSQREKFGKMIEEYLTKRENLGLVIQLVDLRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D ++++L + ++ TK DK++ Q+ ++ K + P +I SS+ Sbjct: 122 TEDDVLMYNYLKHFDLPTLVICTKEDKIAKGKVQKHIKNIKQKLDLDPN--DTIISYSSI 179 Query: 195 KRKGIEVLRKAILETIN 211 + + + I IN Sbjct: 180 QNSKQQYIWDIIANYIN 196 >gi|289550570|ref|YP_003471474.1| GTP-binding protein EngB [Staphylococcus lugdunensis HKU09-01] gi|289180102|gb|ADC87347.1| GTP-binding protein EngB [Staphylococcus lugdunensis HKU09-01] Length = 202 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 65/193 (33%), Positives = 97/193 (50%), Gaps = 11/193 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L + P EIA SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 18 LISAVKEEQYPDTNLSEIALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFY--- 74 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 N + VD+PGYGYA+ K + +G +I Y++ R LR V L+D RH Sbjct: 75 ------NIDQQLIFVDVPGYGYAKVSKSQREKFGKMIEEYITTRENLRLVIQLVDLRHNP 128 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++++L + ++ TK DK+ Q+ L+ K + +I SS+ Sbjct: 129 TQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHLKNIKEKLD--LEDEDNIISYSSI 186 Query: 195 KRKGIEVLRKAIL 207 K + + + Sbjct: 187 KNSRQQQIWNLLE 199 >gi|296135140|ref|YP_003642382.1| ribosome biogenesis GTP-binding protein YsxC [Thiomonas intermedia K12] gi|295795262|gb|ADG30052.1| ribosome biogenesis GTP-binding protein YsxC [Thiomonas intermedia K12] Length = 230 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 10/206 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + LP G PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N Sbjct: 3 HSARFMVTSSSMENLPVTGLPEIAFVGRSNAGKSTAINTLCQQRQLAFASKTPGRTQHIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + P+ LVD+PGYGYA K + W + +YL+ER L + LL D Sbjct: 63 FFAVG-----PKDSPSGLLVDLPGYGYAAVAKTDKKRWQLFLAQYLAERGPLVGLILLAD 117 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-----TA 184 R G+ + D + +F+ +V ++LTK DKL+ Q + + + + TA Sbjct: 118 SRLGLTETDLSLLAFMAPASVPLHVLLTKADKLNRQEGQRAAQAARDQLAQHAQAVGMTA 177 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 + S+ K G+E + I + Sbjct: 178 PISLQLFSATKLSGVESASQLIESWL 203 >gi|294339191|emb|CAZ87545.1| putative GTP-binding protein engB [Thiomonas sp. 3As] Length = 230 Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 10/206 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ + LP G PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N Sbjct: 3 HSARFMVTSSSMENLPVTGLPEIAFVGRSNAGKSTAINTLCQQRQLAFASKTPGRTQHIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF + P+ LVD+PGYGYA K + W + +YL+ER L + LL D Sbjct: 63 FFAVG-----PKDSPSGLLVDLPGYGYAAVAKTDKKRWQLFLAQYLAERGPLVGLILLAD 117 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-----TA 184 R G+ + D + +F+ +V ++LTK DKL+ Q + + + + TA Sbjct: 118 SRLGLTETDLSLLAFMAPASVPLHVLLTKADKLNRQEGQRAAQAARDQLAQHAQAVGMTA 177 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 + S+ K G+E + I + Sbjct: 178 PISLQLFSATKLSGVESASQLIESWL 203 >gi|224141797|ref|XP_002324249.1| predicted protein [Populus trichocarpa] gi|222865683|gb|EEF02814.1| predicted protein [Populus trichocarpa] Length = 316 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 103/204 (50%), Gaps = 14/204 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P G PE A GRSNVGKSSL+N +V RK LA TS PG+TQ +N F Sbjct: 118 FIKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQCINHFKV 177 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + LVD+PGYGYA AP++ W Y RSTL V+LLID Sbjct: 178 ND---------SWYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIP 228 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEV 188 K+ID + S+L + V ++ TK DK +E + + + LIR++ P Sbjct: 229 AKKIDLEYASWLGQNQVPMTLIFTKCDKRKKKKNGGKRPEENVNEFQELIRDFFETAPPW 288 Query: 189 IPTSSVKRKGIEVLRKAILETINY 212 I TS V +G + + + + NY Sbjct: 289 IMTSGVTNQGRDEMLLHMAQLRNY 312 >gi|319944767|ref|ZP_08019031.1| ribosome biogenesis GTP-binding protein YsxC [Lautropia mirabilis ATCC 51599] gi|319742016|gb|EFV94439.1| ribosome biogenesis GTP-binding protein YsxC [Lautropia mirabilis ATCC 51599] Length = 238 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 97/190 (51%), Gaps = 5/190 (2%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P++ G PE+AF GRSN GKSS IN L N+K LA +S PGRTQ LN F Sbjct: 17 PQLDRANPHGLPEVAFVGRSNAGKSSCINTLCNQKRLAFSSRTPGRTQALNLFAVG---P 73 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 +K P LVD PGYG+A A + SW L Y++ R L + L++D R G+ +D Sbjct: 74 VKQPEPLGFLVDTPGYGFATASPEAKRSWQALAGDYMTRRQALTGIVLMVDIRRGLTDLD 133 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRK 197 + + +++ + +VLTK DKLS E + + I + S++ R Sbjct: 134 RQLLAWIPGV-LPLVLVLTKADKLSRQQGLEVRRQLLQEAIIQQREGPVLLQLFSALNRT 192 Query: 198 GIEVLRKAIL 207 G+E LR I Sbjct: 193 GVEPLRDVIA 202 >gi|293363371|ref|ZP_06610193.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma alligatoris A21JP2] gi|292553040|gb|EFF41791.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma alligatoris A21JP2] Length = 195 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 105/197 (53%), Gaps = 12/197 (6%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + F++ + + EI F GRSNVGKSSL+N +VN K+LAR S PGRTQ LN+F Sbjct: 2 YKFIKSSSNMSNWYEHEGNEICFWGRSNVGKSSLLNAIVNNKSLARVSKTPGRTQLLNYF 61 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N +VD+PGYGYA+ K D +I YL + + L+ + LLID R Sbjct: 62 E---------NSQKQVIVDLPGYGYAKLSKSQKDKMLIMIDEYLQKNTRLKALILLIDSR 112 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 HG+ ID+D+ +L + +V TKIDKL+ + + +K +NY I Sbjct: 113 HGITNIDRDIIKYLFSIKIPIYLVYTKIDKLNQKEKSQLSKLSKEEYKNYNC---PYIFV 169 Query: 192 SSVKRKGIEVLRKAILE 208 SS + GI+ L K I E Sbjct: 170 SSQNKFGIDALNKNIQE 186 >gi|332981499|ref|YP_004462940.1| ribosome biogenesis GTP-binding protein YsxC [Mahella australiensis 50-1 BON] gi|332699177|gb|AEE96118.1| ribosome biogenesis GTP-binding protein YsxC [Mahella australiensis 50-1 BON] Length = 202 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 12/202 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ P++G PE+ GRSNVGKSS +N + N + LA + PG+T+ +N Sbjct: 4 KKAEFIASAAIPSQYPESGMPELVLLGRSNVGKSSFVNTIANNRKLAFIGSKPGKTRTIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLI 128 F++ +VD+PGYGYA+ + D W I YL R + ++L+ Sbjct: 64 FYLIN---------GRFYIVDLPGYGYAKVSMQEKDRWSESIETYLKSRIDNIAGAFMLL 114 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D RH + D+ ++ +L VS V K DKL+ + QE L+ K + ++ Sbjct: 115 DIRHKPSEYDKLMWQWLRYYGVSTGFVAMKADKLNKSEVQEHLDMIKKEMEIPQGT--DI 172 Query: 189 IPTSSVKRKGIEVLRKAILETI 210 I S++ ++G AI E + Sbjct: 173 ILFSALTKQGKNDALMAIKEAL 194 >gi|317153283|ref|YP_004121331.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio aespoeensis Aspo-2] gi|316943534|gb|ADU62585.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio aespoeensis Aspo-2] Length = 212 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 100/198 (50%), Gaps = 13/198 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ + EI L P+IA +GRSNVGKSSL+N L RK+LA+ S+ PG+T+ LN++ Sbjct: 8 VKTIYEIKQLESLDEPQIALAGRSNVGKSSLVNRLAGRKSLAKISSKPGKTRSLNYYRVN 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 LVD+PGYGYAR + + WG LI Y++ L+ V +L+D R Sbjct: 68 --------PDGFYLVDLPGYGYARCSQSEREKWGKLIEAYMTANPGLKAVVVLLDARLTP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 +++D ++ S+L + VLTK DK + K +++ + SS Sbjct: 120 QKLDLELTSYLRGLGIPVIPVLTKSDKPKQRERAALQNQWKDILQQPRL----PLLFSSK 175 Query: 195 KRKGIEVLRKAILET-IN 211 G + L + E IN Sbjct: 176 TGMGEDKLWNVLAEYAIN 193 >gi|51473248|ref|YP_067005.1| GTPase EngB [Rickettsia typhi str. Wilmington] gi|81610845|sp|Q68XW9|ENGB_RICTY RecName: Full=Probable GTP-binding protein EngB gi|51459560|gb|AAU03523.1| probable GTP-binding protein EngB [Rickettsia typhi str. Wilmington] Length = 214 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 103/205 (50%), Gaps = 12/205 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I +P PEI F G+SNVGKSS+IN + N K+LA+ SN PGRT+ Sbjct: 20 FRHQAKFVAGANHINQIPDFSLPEIVFVGKSNVGKSSIINTICNNKSLAKVSNIPGRTRQ 79 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + W LI YL L V LL Sbjct: 80 INFFNIID---------KLIIVDLPGYGFANVPISVKEQWEVLITYYLRNSHNLMLVNLL 130 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ ++ L Sbjct: 131 IDSRRGIKENDKKVAELLLANKREFQIIFTKSDKVTD---RKNLNYEAQNFLATLHYSCN 187 Query: 188 VIPTSSVKRKGIEVLRKAILETINY 212 VI SS ++G + L+ ++ + I Y Sbjct: 188 VIYVSSRSKEGTKELKASLAKCIKY 212 >gi|255004364|ref|ZP_05279165.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale str. Virginia] Length = 205 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 118/201 (58%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ GV + LP PE+AF+GRSNVGKSSLIN + K AR S+ PG T+ +N Sbjct: 3 SKCRFVAGVQDKHSLPDFQVPEVAFAGRSNVGKSSLINAVTKNKKGARVSSNPGSTRQIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F++ N A+ALVD+PGYGY++A K++ S+ L+ YL R L + LLID Sbjct: 63 FYL---------NEGALALVDLPGYGYSKASKESASSYMSLVEHYLLTREALHRLVLLID 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + G+K++D D S+L+++ + Y +VLTKID+L+ T + L + ++ +I Sbjct: 114 SKVGLKEVDMDFISWLEERCIHYSLVLTKIDRLTCTEFNDVLSAVQSRVKGCCMLLHPII 173 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS KGI+ L + + + Sbjct: 174 GTSSKSGKGIKELVHEVSKCV 194 >gi|124809435|ref|XP_001348574.1| GTP binding protein, putative [Plasmodium falciparum 3D7] gi|23497470|gb|AAN37013.1| GTP binding protein, putative [Plasmodium falciparum 3D7] Length = 1000 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 103/201 (51%), Gaps = 7/201 (3%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K + + ++ LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ + Sbjct: 93 KPRMVLYKTAIQVNELPLPKYPEIAFIGRSNCGKSTLINELCGRTNKAKVSKIPGCTKEI 152 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 +F+ M LVD+PGYGYA ++ W + YL R L+ V++LI Sbjct: 153 HFYKIGKPCL-------MCLVDLPGYGYAECKEELRLQWNEFTLFYLKNRKNLKKVFVLI 205 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 DCR G+K D+++ F D+ + YQIVL+K D L+ ++ I + + Sbjct: 206 DCRVGLKTSDKELLHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIINQDILPFKNLEKPL 265 Query: 189 IPTSSVKRKGIEVLRKAILET 209 IP SS+K + + LR I + Sbjct: 266 IPLSSIKNQNLSELRNEIAKY 286 >gi|218192390|gb|EEC74817.1| hypothetical protein OsI_10639 [Oryza sativa Indica Group] Length = 348 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 95/236 (40%), Gaps = 42/236 (17%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++ PK PE A GRSNVGKSSLIN L+ RK A TS PG+TQ +N Sbjct: 113 KEAEFVKSSARARDCPKDDRPEFAVLGRSNVGKSSLINALIRRKEAALTSKKPGKTQTIN 172 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYG------------------------------YARA 99 F+ + LVD+PGYG +A A Sbjct: 173 HFLVN---------KSWYLVDLPGYGMYHNDKIIDGIANGEKQSEKYNFALVFIGLFAAA 223 Query: 100 PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKI 159 + W Y R TL V LL+D ++ID D ++L + + V TK Sbjct: 224 SQSARTDWSSFTKGYFLNRDTLVGVLLLVDASIPPQKIDIDCANWLGRNNIGLTYVFTKC 283 Query: 160 DKLSPTT---AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 DK +E +++ + I + P I TSSV G + L + + NY Sbjct: 284 DKSKKGKGGRPEENIKEFQETISSLYPEPPPWIMTSSVTGLGRDGLLLHMSQLRNY 339 >gi|121593133|ref|YP_985029.1| ribosome biogenesis GTP-binding protein YsxC [Acidovorax sp. JS42] gi|120605213|gb|ABM40953.1| GTP-binding protein, HSR1-related protein [Acidovorax sp. JS42] Length = 262 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ LP PEIAF GRSN GKS+ IN L + LA S PGRTQH+N Sbjct: 49 HTARFLTTAAQLHHLPAIEVPEIAFVGRSNAGKSTCINTLTQQGQLAFASKKPGRTQHIN 108 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K L D+PGYGYA + + W +++ YL R +L + LL D Sbjct: 109 LFALG-----KQGATDAVLADLPGYGYAAVSRSDKLRWQQVMLSYLVSRESLTAIVLLCD 163 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D+ + + + + + + ++LTK DKL+ + L T+ Sbjct: 164 PRLGLTELDEALLNAVRPRVEAGLKFLVLLTKADKLTRAEQAKALSITR-----LQAGGG 218 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S++K++G++ + + + + Sbjct: 219 EVRMFSALKKQGVDEVAQLLWQW 241 >gi|157964167|ref|YP_001498991.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia massiliae MTU5] gi|157843943|gb|ABV84444.1| Hypothetical GTP-binding protein [Rickettsia massiliae MTU5] Length = 213 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 102/203 (50%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I + PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ Sbjct: 19 FRHQAKFVAGAMNINQILNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQ 78 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + WG LI YL LR V LL Sbjct: 79 INFFNLAD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLL 129 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ + L Sbjct: 130 IDSRRGIKENDKKVADLLLANKREFQIIFTKSDKVTD---HKNLNDEAQNFLATLNYSCN 186 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ SS ++G L+ ++ + I Sbjct: 187 VMYVSSRSKEGARELKASLAKWI 209 >gi|291530133|emb|CBK95718.1| ribosome biogenesis GTP-binding protein YsxC/EngB [Eubacterium siraeum 70/3] Length = 206 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 14/190 (7%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F K+ F +PK+ EIAFSGRSNVGKSSLIN ++NRK+LAR S+ PG+T Sbjct: 3 FNKAE--FYTSYGLFSQIPKSEKAEIAFSGRSNVGKSSLINKILNRKSLARVSSMPGKTV 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ + + D+PGYGYA+ K W GL+ YL++ L V+ Sbjct: 61 TINFYSVDN----------IYFADLPGYGYAKVSKSEKQRWAGLVEGYLADDRNLTLVFQ 110 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RH D + +FL + + +VLTK DKLS E I H Sbjct: 111 LVDFRHSPTADDVMMINFLIDNGIPFVVVLTKADKLSKKERAARRESLMNEIPCAEDIH- 169 Query: 187 EVIPTSSVKR 196 +I S++ Sbjct: 170 -MIEFSAMNG 178 >gi|255082732|ref|XP_002504352.1| predicted protein [Micromonas sp. RCC299] gi|226519620|gb|ACO65610.1| predicted protein [Micromonas sp. RCC299] Length = 195 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 12/196 (6%) Query: 14 FLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ + P G PE+A GRSNVGKSSL+N+L K+ A S+ PG TQH+N ++ Sbjct: 6 FVSATEDADDCPPPDGLPEVAVIGRSNVGKSSLLNLLTKGKSGALVSSKPGTTQHINHYL 65 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +VD+PGYG+A+A K++ + W Y + RS L V LLID Sbjct: 66 VA---------KKWWIVDLPGYGFAKASKESTEMWDRFTKEYFTTRSNLAGVLLLIDASI 116 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIP 190 + D + +L V + IV TK D+ P +++ + ++ P +I Sbjct: 117 PPMEKDLEYADWLITHNVPFTIVHTKCDRNKPGMPAVDTNIDELRRILDEKWHRLPSMIS 176 Query: 191 TSSVKRKGIEVLRKAI 206 TSSV G E + K I Sbjct: 177 TSSVSHDGREDVLKFI 192 >gi|110644204|ref|YP_671934.1| GTP-binding protein EngB [Escherichia coli 536] gi|110345796|gb|ABG72033.1| probable GTP-binding protein EngB [Escherichia coli 536] Length = 197 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 10/169 (5%) Query: 38 SNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYA 97 SN GKSS +N L N+K+LARTS PGRTQ +N F D LVD+PGYGYA Sbjct: 22 SNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGK---------RLVDLPGYGYA 72 Query: 98 RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLT 157 P++ W + YL +R +L+ + +L+D RH +K +DQ + + ++ ++LT Sbjct: 73 EVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLT 132 Query: 158 KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K DKL+ + L + + + +V SS+K++G++ LR+ + Sbjct: 133 KTDKLASGARKAQLNMVREAVLAF-NGDVQVETFSSLKKQGVDKLRQKL 180 >gi|160872432|ref|ZP_02062564.1| GTP-binding protein EngB [Rickettsiella grylli] gi|159121231|gb|EDP46569.1| GTP-binding protein EngB [Rickettsiella grylli] Length = 199 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +FL+ V ++ LP EIAF GRSN GKSS IN + +K LA+ S PGRTQ LNFF Sbjct: 10 LFLKSVAQLDQLPPDKGAEIAFIGRSNSGKSSAINAITGKKGLAKISKTPGRTQLLNFFQ 69 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + LVD+PGYG+A+ W I YL R +L+ + + +D RH Sbjct: 70 LNE---------NLRLVDLPGYGFAKVSDNRKIDWEKTITHYLKMRKSLKGLIMTMDIRH 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D+ + +F+ + I+LTK DKL+ A TL + + E+ S Sbjct: 121 PLNDRDEVLLAFVSHYHIPTYILLTKADKLTRAQAIHTLRSIRQQLTILNKTC-ELQIFS 179 Query: 193 SVKRKGIEVLRKAILETI 210 +++ G+ R IL+ + Sbjct: 180 AIQSIGLGNARHKILDWL 197 >gi|15603979|ref|NP_220494.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia prowazekii str. Madrid E] gi|6226324|sp|Q9ZE46|ENGB_RICPR RecName: Full=Probable GTP-binding protein EngB gi|3860670|emb|CAA14571.1| unknown [Rickettsia prowazekii] gi|292571693|gb|ADE29608.1| Hypothetical GTP-binding protein [Rickettsia prowazekii Rp22] Length = 214 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 12/205 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I +P PEI F G+SNVGKSS+IN + N K+LA+ SN PGRT+ Sbjct: 20 FRHQAKFVAGAIHINQIPDFSLPEIVFVGKSNVGKSSIINTICNNKSLAKVSNTPGRTRQ 79 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + W GLI YL L V LL Sbjct: 80 INFFNIVD---------KLIIVDLPGYGFANVPISVKEQWEGLITYYLRNSHNLMLVNLL 130 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ +E L Sbjct: 131 IDSRRGIKENDKKVAELLLANKREFQIIFTKSDKVTD---RENLNYEAQNFLATLNYLCN 187 Query: 188 VIPTSSVKRKGIEVLRKAILETINY 212 VI SS ++G+ L+ + + I + Sbjct: 188 VIYVSSRNKEGMRELKASFAQCIKH 212 >gi|328956135|ref|YP_004373468.1| ribosome biogenesis GTP-binding protein YsxC [Coriobacterium glomerans PW2] gi|328456459|gb|AEB07653.1| ribosome biogenesis GTP-binding protein YsxC [Coriobacterium glomerans PW2] Length = 196 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + +P + PE+ F+GRSNVGKSS++N L RKNL + SN PG+T ++N F Sbjct: 12 FVASFGKASQIPLSTCPEVTFAGRSNVGKSSIMNKLFGRKNLVKVSNTPGKTANINLF-- 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +D+PGYGYA+ K W GLI + + + V L+D RH Sbjct: 70 --------EADGIHFIDLPGYGYAQRSKAERSRWAGLIADFFALERSFNLVVALVDIRHD 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +D + FL + + + LTK DKL+ + I P ++I TS+ Sbjct: 122 PSALDHQMIEFLQHNELHFVVALTKADKLNRSQQARQRASISSQIDVDPA---DIITTSA 178 Query: 194 VKRKGIEVLRKAILETI 210 GI+VL++ I + Sbjct: 179 RSGTGIDVLKERIAQAC 195 >gi|56416888|ref|YP_153962.1| GTPase EngB [Anaplasma marginale str. St. Maries] gi|222475253|ref|YP_002563669.1| Probable GTP-binding protein engB [Anaplasma marginale str. Florida] gi|255003237|ref|ZP_05278201.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale str. Puerto Rico] gi|269958697|ref|YP_003328484.1| GTPase EngB [Anaplasma centrale str. Israel] gi|81359025|sp|Q5PAH3|ENGB_ANAMM RecName: Full=Probable GTP-binding protein EngB gi|254783183|sp|B9KIV1|ENGB_ANAMF RecName: Full=Probable GTP-binding protein EngB gi|56388120|gb|AAV86707.1| hypothetical protein AM764 [Anaplasma marginale str. St. Maries] gi|222419390|gb|ACM49413.1| Probable GTP-binding protein engB [Anaplasma marginale str. Florida] gi|269848526|gb|ACZ49170.1| GTPase EngB [Anaplasma centrale str. Israel] Length = 205 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 118/201 (58%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ GV + LP PE+AF+GRSNVGKSSLIN + K AR S+ PG T+ +N Sbjct: 3 SKCRFVAGVQDKHSLPDFQVPEVAFAGRSNVGKSSLINAVTKNKKGARVSSNPGSTRQIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F++ N A+ALVD+PGYGY++A K++ S+ L+ YL R L + LLID Sbjct: 63 FYL---------NEGALALVDLPGYGYSKASKESASSYMSLVEHYLLTREALHRLVLLID 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + G+K++D D S+L+++ + Y +VLTKID+L+ T + L + ++ +I Sbjct: 114 SKVGLKEVDMDFISWLEERCIHYSLVLTKIDRLACTEFNDVLSAVQSRVKGCCMLLHPII 173 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS KGI+ L + + + Sbjct: 174 GTSSKSGKGIKELVHEVSKCV 194 >gi|70949402|ref|XP_744115.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56523930|emb|CAH79943.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi] Length = 929 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 7/201 (3%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K + + ++ LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ + Sbjct: 92 KPRMVLYKVAIKVNELPLPKYPEIAFIGRSNSGKSTLINELCGRSNKAKVSKMPGCTKQI 151 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 +F+ L LVD+PGYG+A + ++ W + YL R+ L+ V++LI Sbjct: 152 HFYKIGKPCLL-------CLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRANLKKVFVLI 204 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 DCR G+K D+++F F D+ + YQIVL+K D L+ ++ I ++ + Sbjct: 205 DCRIGLKTSDKELFHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIMNEEIVHFKNLEKNI 264 Query: 189 IPTSSVKRKGIEVLRKAILET 209 I SS+KR+ + LR I + Sbjct: 265 ISLSSLKRQNLNELRNEIAKY 285 >gi|332704121|ref|ZP_08424209.1| GTP-binding protein engB [Desulfovibrio africanus str. Walvis Bay] gi|332554270|gb|EGJ51314.1| GTP-binding protein engB [Desulfovibrio africanus str. Walvis Bay] Length = 196 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 98/190 (51%), Gaps = 12/190 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 L P+IA +GRSNVGKSSLIN L K LA+ S PG+T+ +N + Sbjct: 15 DQLSLPDAPQIALAGRSNVGKSSLINALAGTKKLAKVSGTPGKTRSINLY--------HV 66 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + LVD+PGYGYAR K+ SW LI Y+S+ ++L V +LIDCRH + +D ++ Sbjct: 67 SPAGYYLVDLPGYGYARCSKQERQSWASLIDAYISKATSLCAVAMLIDCRHSPQLLDLEL 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 S+L + + +VLTK D+ + + ++ +P S+ +G E Sbjct: 127 GSYLRQIGMPILVVLTKADQCKQAERAKRQREWTEIL----GEIQRPVPFSARTGQGREE 182 Query: 202 LRKAILETIN 211 L +A+ + Sbjct: 183 LWQALDSAVG 192 >gi|157825273|ref|YP_001492993.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia akari str. Hartford] gi|166225973|sp|A8GM60|ENGB_RICAH RecName: Full=Probable GTP-binding protein EngB gi|157799231|gb|ABV74485.1| GTPase EngB [Rickettsia akari str. Hartford] Length = 212 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 102/203 (50%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +S F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ Sbjct: 20 FRSQVKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQ 79 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + W LI YL LR V LL Sbjct: 80 INFFNLAD---------KLIIVDLPGYGFAHVPISVKEQWEVLISYYLRNSHNLRLVNLL 130 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ DQ V L +QI+ TK DK+ + L Sbjct: 131 IDSRRGIKENDQKVAELLLANKREFQIIFTKSDKV---IDCKNLNNEVQNFLATLNYSCN 187 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ SS ++G L+ ++ + I Sbjct: 188 VMYVSSRSKEGARALKASLAKCI 210 >gi|50365173|ref|YP_053598.1| GTPase EngB [Mesoplasma florum L1] gi|81827302|sp|Q6F1A9|ENGB_MESFL RecName: Full=Probable GTP-binding protein EngB gi|50363729|gb|AAT75714.1| GTP-binding protein, endoglucanase/xylanase [Mesoplasma florum L1] Length = 198 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 10/198 (5%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F++ + PE+ F GRSNVGKSS IN L N K LA+ +N PG+T+ LNFF Sbjct: 6 VFIKSAANKSGWIEDNIPEVCFVGRSNVGKSSFINTLANNKKLAKVANTPGKTRLLNFFD 65 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + LVD PGYGYA+ +G ++ YL+ R L+ V +L+D RH Sbjct: 66 INN--------SSFRLVDAPGYGYAKISNSMKVEFGIMMEDYLTTRENLKLVCMLVDLRH 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 D ++ FL + ++ TK+DKL + + K + + + S Sbjct: 118 KPTNDDVQMYDFLKANDIPVLMIGTKLDKLKRNEIAKNEKLIKETLE--FDQNDVFVKVS 175 Query: 193 SVKRKGIEVLRKAILETI 210 ++ + I+ A++ + Sbjct: 176 NLDKINIKESYDALIRLL 193 >gi|225009952|ref|ZP_03700424.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C] gi|225005431|gb|EEG43381.1| GTP-binding protein HSR1-related [Flavobacteria bacterium MS024-3C] Length = 160 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 9/164 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + PK PE AF GRSNVGKSSLIN+L ++K+LA+TS PG+TQ +N Sbjct: 5 SAEFVMSNAHVEKCPKDPIPEYAFIGRSNVGKSSLINMLTSKKSLAKTSGRPGKTQLINH 64 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F LVD+PGYGYAR K++ ++ I Y +R+ L C ++L+D Sbjct: 65 FKINQ---------NWFLVDLPGYGYARVSKRDKKTFQKYITEYFLKRTQLVCAFVLVDI 115 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT 174 RH + +D D ++ + + + I+ TK DKL P + + Sbjct: 116 RHEPQPVDLDFMRWMGENEIPFCIIFTKADKLKPAIIEANTKAY 159 >gi|288574914|ref|ZP_06393271.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570655|gb|EFC92212.1| small GTP-binding protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 203 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 10/204 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ ++ E P+ PEIA +GRSNVGKSSL+N L+++K +A S+ PG+T+ Sbjct: 1 MSRWRAELVQTAFEARQFPEPKFPEIALAGRSNVGKSSLLNALIDQK-IAHISSKPGKTR 59 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NFF + LVD+PGYG+A KK D W LI +Y+S R L V Sbjct: 60 SINFFEV------ASGGSPFTLVDLPGYGFASRSKKEQDQWRKLIEKYVSSRQNLSLVIH 113 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RHG+ + D ++ ++ V V TK+DK++ + L K I++ + Sbjct: 114 LVDFRHGLLKNDVELQEWISALGVPMLTVFTKVDKIARGKRKGELHKY---IKSGLKSVD 170 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 I TS+ + GI+ LR I + Sbjct: 171 VPILTSTEGKLGIDELRTFISAYL 194 >gi|15606865|ref|NP_214245.1| hypothetical protein aq_1815 [Aquifex aeolicus VF5] gi|6226469|sp|O67679|ENGB_AQUAE RecName: Full=Probable GTP-binding protein EngB gi|2984110|gb|AAC07648.1| hypothetical protein aq_1815 [Aquifex aeolicus VF5] Length = 183 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 105/188 (55%), Gaps = 16/188 (8%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 P PE+ F GRSNVGKSSL+N++V K +A+ S PGRT+ +N+F+ Sbjct: 10 FEEFPPPDYPEVVFVGRSNVGKSSLLNMVVGSK-VAKVSKTPGRTRAVNYFLLD------ 62 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQ 139 + LVD+PGYGYA+ ++ ++ W ++ RY ER ++ +LLID GV+ +D+ Sbjct: 63 ---KKLYLVDVPGYGYAKVGREEMEKWRKMMERYFKERKDNIKMAFLLIDAVAGVQPLDE 119 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + + + + +V+TKIDK S + +TL++ K + ++ +S+ + KG Sbjct: 120 QMIEWFEYYGIPFTVVITKIDKASQSEIAKTLKQVKRYV-----GDGAIVLSSAKEGKGK 174 Query: 200 EVLRKAIL 207 + L IL Sbjct: 175 KELLSRIL 182 >gi|229586341|ref|YP_002844842.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia africae ESF-5] gi|259645905|sp|C3PMD9|ENGB_RICAE RecName: Full=Probable GTP-binding protein EngB gi|228021391|gb|ACP53099.1| Hypothetical GTP-binding protein [Rickettsia africae ESF-5] Length = 212 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 103/203 (50%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I +P PEIAF G+SNVGKSSLIN + + KNLA+ SN PGRT+ Sbjct: 18 FRHQAKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICSNKNLAKVSNTPGRTRQ 77 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + WG LI YL LR V LL Sbjct: 78 INFFNLAD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLL 128 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ + L Sbjct: 129 IDSRRGIKENDKKVADLLLANKREFQIIFTKSDKVTD---HKNLHDEAQNFLATLNYSCN 185 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ S+ ++G L+ ++ + I Sbjct: 186 VMYVSNRSKEGARELKASLAKCI 208 >gi|157828012|ref|YP_001494254.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia rickettsii str. 'Sheila Smith'] gi|166225976|sp|A8GQS1|ENGB_RICRS RecName: Full=Probable GTP-binding protein EngB gi|157800493|gb|ABV75746.1| GTPase EngB [Rickettsia rickettsii str. 'Sheila Smith'] Length = 212 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 12/205 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN GRT+ Sbjct: 18 FRHQAKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQ 77 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + WG LI YL LR V LL Sbjct: 78 INFFNLAD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLL 128 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ + L Sbjct: 129 IDSRRGIKENDKKVADLLLANKREFQIIFTKSDKVTD---HKNLHDEAQNFLATLNYSCN 185 Query: 188 VIPTSSVKRKGIEVLRKAILETINY 212 V+ S+ ++G L+ ++ + I + Sbjct: 186 VMYVSNRSKEGARELKASLAKCIKF 210 >gi|323705915|ref|ZP_08117486.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacterium xylanolyticum LX-11] gi|323534713|gb|EGB24493.1| ribosome biogenesis GTP-binding protein YsxC [Thermoanaerobacterium xylanolyticum LX-11] Length = 200 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 15/196 (7%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 P G +IA GRSNVGKSS IN +VNR N AR S PG+TQ +NF++ + Sbjct: 11 SAYNKTQYPNDGLKQIAVIGRSNVGKSSFINAIVNRNNFARVSQKPGKTQGINFYIVNN- 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYA K+ W I YL+ + L +L+D RH Sbjct: 70 --------TFYLVDLPGYGYAEVSKELKKQWSINIETYLNTSAYLVGAIMLVDIRHKPTD 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + ++L + +++Q+V TK DKL Q +L+ + ++IP SS+K+ Sbjct: 122 DDVLMVNYLKNRNINFQVVATKSDKLKRYEMQMSLKVISDTLS---VDKEKIIPFSSLKK 178 Query: 197 KGIEVL---RKAILET 209 G++ + +I+E Sbjct: 179 AGVDDVYTYLDSIVEA 194 >gi|262052247|ref|ZP_06024452.1| GTP-binding protein [Staphylococcus aureus 930918-3] gi|259159848|gb|EEW44887.1| GTP-binding protein [Staphylococcus aureus 930918-3] Length = 196 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + G P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 11 IISAVKEGQYPETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Sbjct: 71 E---------QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++++L + ++ TK DK+ Q+ ++ K + P ++ SS+ Sbjct: 122 TQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHIKNIKTQLDMDP--DDTIVSYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 + + + I I Sbjct: 180 QNNKQQQIWNLIEPYI 195 >gi|42573726|ref|NP_974959.1| GTP binding [Arabidopsis thaliana] gi|222423373|dbj|BAH19659.1| AT5G58370 [Arabidopsis thaliana] gi|332009661|gb|AED97044.1| putative GTP-binding protein CGPA [Arabidopsis thaliana] Length = 465 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 10/207 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + ++F ++ F P PEIAF+GRSNVGKSSL+N L + + RTS+ Sbjct: 262 IEESVF-RNKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDK 320 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF P + LVD+PGYG+A A + ++W L+ Y+S R++L Sbjct: 321 PGLTQTINFFGLG---------PKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSL 371 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V LL+D + G+K DQ++ + +++ YQIVLTK D + P + + ++ Sbjct: 372 KRVCLLVDTKWGMKPRDQELINLMERSNTKYQIVLTKTDVVFPIDVARRAMQIEEKLKAN 431 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILE 208 + ++ SS GI LR A+ + Sbjct: 432 RSIVQPLMMVSSRSGAGIGSLRTALAK 458 >gi|58617188|ref|YP_196387.1| GTPase EngB [Ehrlichia ruminantium str. Gardel] gi|75432753|sp|Q5FGZ3|ENGB_EHRRG RecName: Full=Probable GTP-binding protein EngB gi|58416800|emb|CAI27913.1| Probable GTP-binding protein engB [Ehrlichia ruminantium str. Gardel] Length = 200 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 76/201 (37%), Positives = 108/201 (53%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ G I LP PE+A +GRSNVGKSSLIN + N + AR S+ PG T+ +N Sbjct: 8 SQCQFIIGATSIKSLPDFSIPEVALAGRSNVGKSSLINAITNNRKNARISSKPGCTRQIN 67 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F++ M LVD+PGYGY++A + V+S+ L+ YL R L V LLID Sbjct: 68 FYLIN--------KGLMVLVDLPGYGYSKADRATVNSYICLMEYYLLNRKNLSKVVLLID 119 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + G K+ID D +L+ + YQ+VLTKID++ + + N+ +I Sbjct: 120 AKVGFKEIDLDFIRWLEVHQILYQLVLTKIDRVQSNVLDVIVSDVQNFNLNFIIY--PII 177 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS ++GIE L I + I Sbjct: 178 NVSSKCKQGIEELIYEIAQCI 198 >gi|301630918|ref|XP_002944562.1| PREDICTED: probable GTP-binding protein engB-like [Xenopus (Silurana) tropicalis] Length = 230 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 13/203 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL ++ LP PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N Sbjct: 27 HTARFLTTAAQLHQLPAIEVPEIAFVGRSNAGKSTCINTLTQQRQLAFASKKPGRTQHIN 86 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F K L D+PGYGYA + + W ++ YL R L + LL D Sbjct: 87 LFALG-----KQGQMDAVLADLPGYGYAAVSRTDKQRWQQVMANYLVSRQGLSGIVLLCD 141 Query: 130 CRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 R G+ ++D + + ++ + + ++LTK DKL+ + L T+ Sbjct: 142 PRLGMTELDDALLEVVRPRVEQGLKFLVLLTKADKLTRAQQAKALSITR-----LQAGGG 196 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 EV S++KR+G++ + + + + Sbjct: 197 EVKMFSALKRQGVDEVAQLLWQW 219 >gi|254995072|ref|ZP_05277262.1| ribosome biogenesis GTP-binding protein YsxC [Anaplasma marginale str. Mississippi] Length = 205 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 118/201 (58%), Gaps = 9/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ GV + LP PE+AF+GRSNVGKSSLIN + K AR S+ PG T+ +N Sbjct: 3 SKCRFVAGVQDKHSLPDFQVPEVAFAGRSNVGKSSLINAVTKNKKGARVSSNPGSTRQIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F++ N A+ALVD+PGYGY++A K++ S+ L+ YL R L + LLID Sbjct: 63 FYL---------NEGALALVDLPGYGYSKASKESASSYMSLVEHYLLTREALHRLVLLID 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + G+K++D D S+L+++ + Y +VLTKID+L+ T + L + ++ +I Sbjct: 114 SKVGLKEVDMDFISWLEERCIHYSLVLTKIDRLTCTGFNDVLSAVQSRVKGCCMLLHPII 173 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS KGI+ L + + + Sbjct: 174 GTSSKSGKGIKELVHEVSKCV 194 >gi|283853460|ref|ZP_06370703.1| small GTP-binding protein [Desulfovibrio sp. FW1012B] gi|283571133|gb|EFC19150.1| small GTP-binding protein [Desulfovibrio sp. FW1012B] Length = 209 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 67/188 (35%), Positives = 96/188 (51%), Gaps = 12/188 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P P+IA +GRSNVGKS+L+N L RK LA+ S PG+T+ LNF+ + Sbjct: 23 DQIPVVAEPQIALAGRSNVGKSTLVNCLAGRKGLAKISATPGKTRSLNFYQAR------- 75 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYAR D W LI YLS+ LR V L+DCR +++D ++ Sbjct: 76 -ATGYCLVDLPGYGYARCSMAERDKWAKLIEAYLSKTDQLRAVVALVDCRLPPQRLDIEL 134 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 +L + + +VLTK DK + ++ + L + A P I S G E Sbjct: 135 VDWLRARRIPMIMVLTKADKCKQRDREARKKEWRELAQP---AFPP-ILFSGKTGLGREA 190 Query: 202 LRKAILET 209 L + + E Sbjct: 191 LCRVLAEA 198 >gi|241889982|ref|ZP_04777280.1| ribosome biogenesis GTP-binding protein YsxC [Gemella haemolysans ATCC 10379] gi|241863604|gb|EER67988.1| ribosome biogenesis GTP-binding protein YsxC [Gemella haemolysans ATCC 10379] Length = 198 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ PE+A GRSNVGKSS IN ++ RKN AR S+ PG+T+ LNFF Sbjct: 12 LISAVSKKQYPEHEKPEVAMCGRSNVGKSSFINTILERKNYARVSSKPGKTRTLNFFDVD 71 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D L + PGYGYA+ K + +IV Y + L V LID RH Sbjct: 72 DQVVLVDV---------PGYGYAKLSKPEKEKLYDMIVEYFTNSENLGFVLHLIDSRHKP 122 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++ FL+ + + IV+TKIDK+S + K + +IP SSV Sbjct: 123 SQDDIEMNEFLNYYEIPFVIVMTKIDKISKNELAKNTGIIKRELDLTNNMA--IIPFSSV 180 Query: 195 KRKGIEVLRKAILETI 210 + G + + I + + Sbjct: 181 TKIGKDQVLNEIAKVL 196 >gi|83315808|ref|XP_730953.1| GTP-binding protein EngB [Plasmodium yoelii yoelii str. 17XNL] gi|23490838|gb|EAA22518.1| probable GTP-binding protein engb, putative [Plasmodium yoelii yoelii] Length = 951 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 7/201 (3%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K + + ++ LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ + Sbjct: 92 KPRMVLYKVAIKVNELPLPKYPEIAFIGRSNSGKSTLINELCGRSNKAKVSKMPGCTKQI 151 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 +F+ L LVD+PGYG+A + ++ W + YL R+ L+ V++LI Sbjct: 152 HFYKIGKPCLL-------CLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRTNLKKVFVLI 204 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 DCR G+K D+++F F D+ + YQIVL+K D L+ ++ I ++ + Sbjct: 205 DCRIGLKTSDKELFHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIMNEEIVHFKNLEKNI 264 Query: 189 IPTSSVKRKGIEVLRKAILET 209 I SS+KR+ + LR I + Sbjct: 265 ISLSSLKRQNLNELRNEIAKY 285 >gi|297793371|ref|XP_002864570.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297310405|gb|EFH40829.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 467 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 10/207 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + ++F ++ F P PEIAF+GRSNVGKSSL+N L + + RTS+ Sbjct: 264 IEESVF-RNKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDK 322 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF P + LVD+PGYG+A A + ++W L+ Y+S R++L Sbjct: 323 PGLTQTINFFGLG---------PKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSL 373 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V LL+D + G+K DQ++ + +++ YQIVLTK D + P + + ++ Sbjct: 374 KRVCLLVDTKWGMKPRDQELINLMERSNTKYQIVLTKTDVVFPMDVARRAMQIEEKLKAN 433 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILE 208 + ++ SS GI LR A+ + Sbjct: 434 RSIVQPLMMVSSRSGAGIGSLRTALAK 460 >gi|218189008|gb|EEC71435.1| hypothetical protein OsI_03633 [Oryza sativa Indica Group] gi|222619209|gb|EEE55341.1| hypothetical protein OsJ_03357 [Oryza sativa Japonica Group] Length = 344 Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 105/235 (44%), Gaps = 42/235 (17%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A F++ P+ G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N Sbjct: 115 AADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINH 174 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F D + LVD+PGYGYA AP++ +W Y R L V+LL+D Sbjct: 175 FKVND---------SWYLVDLPGYGYAAAPQEARTNWDEFTRNYFLGRENLVSVFLLVDA 225 Query: 131 RHGVKQIDQDVFSFLDKK----------------------------AVSYQIVLTKIDKL 162 K+ID D S+L + V +V TK DK Sbjct: 226 SIPAKKIDLDYASWLGQNKCKIQKSSQTSNYVGINLVPETPLKTSSNVPMTLVFTKCDKR 285 Query: 163 SPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 +E +E + LIR Y A P I TSSV +G + + + + NY Sbjct: 286 KKKKNGGKRPEENVENFQSLIREYFEAAPPWIMTSSVTNQGRDEILLHMSQLRNY 340 >gi|57239177|ref|YP_180313.1| ribosome biogenesis GTP-binding protein YsxC [Ehrlichia ruminantium str. Welgevonden] gi|58579135|ref|YP_197347.1| GTPase EngB [Ehrlichia ruminantium str. Welgevonden] gi|81557312|sp|Q5HB81|ENGB_EHRRW RecName: Full=Probable GTP-binding protein EngB gi|57161256|emb|CAH58177.1| putative GTP binding protein EngB [Ehrlichia ruminantium str. Welgevonden] gi|58417761|emb|CAI26965.1| Probable GTP-binding protein engB [Ehrlichia ruminantium str. Welgevonden] Length = 200 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 76/201 (37%), Positives = 108/201 (53%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ G I LP PE+A +GRSNVGKSSLIN + N + AR S+ PG T+ +N Sbjct: 8 SQCQFIIGATSIKSLPDFSIPEVALAGRSNVGKSSLINAITNNRKNARISSKPGCTRQIN 67 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F++ M LVD+PGYGY++A + V+S+ L+ YL R L V LLID Sbjct: 68 FYLIN--------KGLMVLVDLPGYGYSKADRATVNSYICLMEYYLLNRKNLSKVVLLID 119 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + G K+ID D +L+ + YQ+VLTKID++ + + N+ +I Sbjct: 120 AKVGFKEIDLDFIRWLEVHQILYQLVLTKIDRVQSNVLDVIVSDIQNFNLNFIIY--PII 177 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS ++GIE L I + I Sbjct: 178 NVSSKCKQGIEELIYEIAQCI 198 >gi|325847177|ref|ZP_08169976.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480957|gb|EGC84003.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 195 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 PK EIAF+GRSNVGKSS IN + +KNLA+TS+ PG+T+ +NF+ D Sbjct: 16 SQFPKDNFDEIAFAGRSNVGKSSFINSFLGKKNLAKTSSKPGKTKTINFYKINDR----- 70 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ KK + W LI YL +R L+ V+LL+D RH + D+++ Sbjct: 71 ----FRLVDLPGYGYAKVSKKEKEKWNNLIHEYLYKRENLKEVFLLVDIRHAPTKQDKEM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + ++ TK DK+ T ++ +++ + + SS V Sbjct: 127 YEWIVDSGFTGFVIATKYDKIPKTHLKKHIKEIMKTLNIDDEGL--IFAYSSTTSHNKNV 184 Query: 202 LRKAILETIN 211 L + + IN Sbjct: 185 LLEQVDVIIN 194 >gi|165932710|ref|YP_001649499.1| GTP-binding protein YsxC [Rickettsia rickettsii str. Iowa] gi|165907797|gb|ABY72093.1| GTP-binding protein [Rickettsia rickettsii str. Iowa] Length = 225 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 103/205 (50%), Gaps = 12/205 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN GRT+ Sbjct: 31 FRHQAKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQ 90 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + WG LI YL LR V LL Sbjct: 91 INFFNLAD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLL 141 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ + L Sbjct: 142 IDSRRGIKENDKKVADLLLANKREFQIIFTKSDKVTD---HKNLHDEAQNFLATLNYSCN 198 Query: 188 VIPTSSVKRKGIEVLRKAILETINY 212 V+ S+ ++G L+ ++ + I + Sbjct: 199 VMYVSNRSKEGARELKASLAKCIKF 223 >gi|237736667|ref|ZP_04567148.1| GTP-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229420529|gb|EEO35576.1| GTP-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 201 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 14/195 (7%) Query: 14 FLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++ P + E AF GRSNVGKSSLIN + RK LA+TS PGRTQ +N+F Sbjct: 8 FVKSAVYEKDYPMELKNIEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQLINYFK 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + +VD+PGYG+A+ PK+ WG + RY++ + V++L+D R Sbjct: 68 VNN---------EFYIVDLPGYGFAKVPKEMKAEWGKTMERYVASARK-KLVFVLLDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D ++ +LD + ++I+ TK+DK+S + L+ K + + + +V S Sbjct: 118 IPSEEDMEMLVWLDHHDIPFKIIFTKMDKVSNNEKFKCLKDIKKKVEFH---NDDVFFHS 174 Query: 193 SVKRKGIEVLRKAIL 207 S+ G E + I Sbjct: 175 SLNDTGKEDILNYIE 189 >gi|49483916|ref|YP_041140.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MRSA252] gi|257425789|ref|ZP_05602213.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 55/2053] gi|257428455|ref|ZP_05604853.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 65-1322] gi|257431089|ref|ZP_05607466.1| GTP-binding protein engB [Staphylococcus aureus subsp. aureus 68-397] gi|257433772|ref|ZP_05610130.1| GTPase EngB [Staphylococcus aureus subsp. aureus E1410] gi|257436688|ref|ZP_05612732.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M876] gi|282904245|ref|ZP_06312133.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C160] gi|282906070|ref|ZP_06313925.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus Btn1260] gi|282908985|ref|ZP_06316803.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911301|ref|ZP_06319103.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus WBG10049] gi|282914470|ref|ZP_06322256.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M899] gi|282919439|ref|ZP_06327174.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C427] gi|282924816|ref|ZP_06332482.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C101] gi|283958425|ref|ZP_06375876.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus A017934/97] gi|293503548|ref|ZP_06667395.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 58-424] gi|293510563|ref|ZP_06669268.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M809] gi|293537105|ref|ZP_06671785.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M1015] gi|295428245|ref|ZP_06820874.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590792|ref|ZP_06949430.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MN8] gi|56749018|sp|Q6GG32|ENGB_STAAR RecName: Full=Probable GTP-binding protein EngB gi|49242045|emb|CAG40744.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257271483|gb|EEV03629.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 55/2053] gi|257275296|gb|EEV06783.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 65-1322] gi|257278037|gb|EEV08685.1| GTP-binding protein engB [Staphylococcus aureus subsp. aureus 68-397] gi|257281865|gb|EEV12002.1| GTPase EngB [Staphylococcus aureus subsp. aureus E1410] gi|257284039|gb|EEV14162.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M876] gi|282313182|gb|EFB43578.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C101] gi|282317249|gb|EFB47623.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C427] gi|282321651|gb|EFB51976.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M899] gi|282324996|gb|EFB55306.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus WBG10049] gi|282327249|gb|EFB57544.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331362|gb|EFB60876.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus Btn1260] gi|282595863|gb|EFC00827.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus C160] gi|283790574|gb|EFC29391.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus A017934/97] gi|290919950|gb|EFD97018.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M1015] gi|291095214|gb|EFE25479.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 58-424] gi|291466454|gb|EFF08975.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus M809] gi|295127645|gb|EFG57282.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575678|gb|EFH94394.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MN8] gi|312437868|gb|ADQ76939.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus TCH60] gi|315195576|gb|EFU25963.1| GTPase EngB [Staphylococcus aureus subsp. aureus CGS00] Length = 196 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 11 IISAVKEDQYPETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Sbjct: 71 E---------QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++++L + ++ TK DK+ Q+ ++ K + P ++ SS+ Sbjct: 122 TQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHIKNIKTQLDMDP--DDTIVSYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 + + + I I Sbjct: 180 QNNKQQQIWNLIEPYI 195 >gi|20330773|gb|AAM19136.1|AC103891_16 Putative nucleotide binding protein [Oryza sativa Japonica Group] gi|27311248|gb|AAO00694.1| Putative nucleotide binding protein [Oryza sativa Japonica Group] gi|125585504|gb|EAZ26168.1| hypothetical protein OsJ_10034 [Oryza sativa Japonica Group] Length = 255 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 95/236 (40%), Gaps = 42/236 (17%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F++ PK PE A GRSNVGKSSLIN L+ RK A TS PG+TQ +N Sbjct: 20 KEAEFVKSSARARDCPKDDRPEFAVLGRSNVGKSSLINALIRRKEAALTSKKPGKTQTIN 79 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYG------------------------------YARA 99 F+ + LVD+PGYG +A A Sbjct: 80 HFLVN---------KSWYLVDLPGYGMYHNDKIIDGIANGEKQSEKYNFALVFIGLFAAA 130 Query: 100 PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKI 159 + W Y R TL V LL+D ++ID D ++L + + V TK Sbjct: 131 SQSARTDWSSFTKGYFLNRDTLVGVLLLVDASIPPQKIDIDCANWLGRNNIGLTYVFTKC 190 Query: 160 DKLSPTT---AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 DK +E +++ + I + P I TSSV G + L + + NY Sbjct: 191 DKSKKGKGGRPEENIKEFQETISSLYPEPPPWIMTSSVTGLGRDGLLLHMSQLRNY 246 >gi|82948297|dbj|BAE53161.1| GTP-binding protein engB [Magnetospirillum magneticum AMB-1] Length = 162 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 81/167 (48%), Positives = 97/167 (58%), Gaps = 9/167 (5%) Query: 41 GKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP 100 GKSSLIN L R LARTSN PGRTQ LNFF N + LVDMPGYG+A+AP Sbjct: 2 GKSSLINALTGRNTLARTSNTPGRTQELNFF---------NLGGRLILVDMPGYGFAQAP 52 Query: 101 KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 K V+ W L+ +L RS LR +L+D RHG+K D+D+ LDK AV YQ+VLTK D Sbjct: 53 KGLVEKWTRLVNGFLKGRSVLRRAVVLVDSRHGLKDSDRDMMKMLDKAAVVYQVVLTKAD 112 Query: 161 KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 KL +T I+ AHP +I TSS K GI LR + Sbjct: 113 KLKAAELDAVQARTLEEIKGRVAAHPHLIVTSSEKGTGIPELRAELA 159 >gi|281203975|gb|EFA78171.1| Putative GTP-binding protein [Polysphondylium pallidum PN500] Length = 441 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 104/205 (50%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + S ++++ PE+AF GRSNVGKSS+IN + ++ A+TS+ Sbjct: 189 FKLPTYFHSKFVYVASAKSKESFIPEKLPEVAFIGRSNVGKSSIINAIT-QRGQAKTSDK 247 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +N++ + +VD+PGYG+A A + VD W L + YL+ R +L Sbjct: 248 PGFTQSINWYELG---------STLYIVDLPGYGFAFAKSQKVDQWNQLTLEYLTTRKSL 298 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V+LL+D RHG+K+ D ++ LDK+ V QIVLTK D + + ++ Y Sbjct: 299 KRVFLLLDARHGLKESDHEILEILDKEHVKTQIVLTKGDLVEQKEIAKRFTLVTEELKKY 358 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 VI SS GI L I Sbjct: 359 HHTQLPVISVSSKTFGGIPELASLI 383 >gi|212696595|ref|ZP_03304723.1| hypothetical protein ANHYDRO_01135 [Anaerococcus hydrogenalis DSM 7454] gi|212676326|gb|EEB35933.1| hypothetical protein ANHYDRO_01135 [Anaerococcus hydrogenalis DSM 7454] Length = 195 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P EIAF+GRSNVGKSS IN + +KNLA+TS+ PG+T+ +NF+ D Sbjct: 16 SQFPNDNFDEIAFAGRSNVGKSSFINSFLGKKNLAKTSSKPGKTKTINFYKIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ KK + W LI YL +R L+ V+LL+D RH + D+++ Sbjct: 70 ---KFRLVDLPGYGYAKVSKKEKEKWNNLIHEYLYKRENLKEVFLLVDIRHAPTKQDKEM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + ++ TK DK+ T ++ +++ + + SS V Sbjct: 127 YEWIIDSGFTGFVIATKYDKIPKTHLKKHIKEIMKTLNIDDEGL--IFAYSSTTSHNKNV 184 Query: 202 LRKAILETIN 211 L + + IN Sbjct: 185 LLEQVDVIIN 194 >gi|83319725|ref|YP_424232.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|119369215|sp|Q2SSN1|ENGB_MYCCT RecName: Full=Probable GTP-binding protein EngB gi|83283611|gb|ABC01543.1| GTP-binding conserved hypothetical protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 196 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 86/198 (43%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ EI GRSNVGKSS IN L N LA+ SN PG+T+ LNFF Sbjct: 7 FITSAANKSNWINDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLLNFFEI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD PGYGYA+ + ++ Y R L+ V+LL+D RH Sbjct: 67 N--------KGEYRLVDAPGYGYAKVDDSIKIQFAKMMEEYFINRKNLKGVFLLLDLRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ FL + I+ TK+DKL + + K I Y + I S+ Sbjct: 119 PSNDDIMMYQFLKHYNIPVVIIGTKLDKLKKNEYIKNEKMIKEAINFYQE--DDFIKISN 176 Query: 194 VKRKGIEVLRKAILETIN 211 + + I + I + + Sbjct: 177 LNKTNIIKCYELINKLLG 194 >gi|42520140|ref|NP_966055.1| GTPase EngB [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652806|sp|Q73IC3|ENGB_WOLPM RecName: Full=Probable GTP-binding protein EngB gi|42409877|gb|AAS13989.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila melanogaster] Length = 197 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 74/171 (43%), Positives = 103/171 (60%), Gaps = 8/171 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ G +I LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +N Sbjct: 7 SNCNFIFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ D LVD+PGYGY+ A K+ + + LI YL +R LR V++LID Sbjct: 67 FYSMYD--------DKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRENLRRVFVLID 118 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + G+K+ID+D +L +++ IVLTKIDK+S + +E + I N Sbjct: 119 SKVGLKEIDKDFIYWLIYNNINFNIVLTKIDKVSQKSLGAVIEDIQKWINN 169 >gi|15924663|ref|NP_372197.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus Mu50] gi|15927252|ref|NP_374785.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus N315] gi|49486500|ref|YP_043721.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MSSA476] gi|57650545|ref|YP_186558.1| GTPase EngB [Staphylococcus aureus subsp. aureus COL] gi|82751262|ref|YP_417003.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus RF122] gi|87160096|ref|YP_494315.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195478|ref|YP_500282.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268154|ref|YP_001247097.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus JH9] gi|150394221|ref|YP_001316896.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus JH1] gi|151221779|ref|YP_001332601.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus str. Newman] gi|156979991|ref|YP_001442250.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus Mu3] gi|161509892|ref|YP_001575551.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142576|ref|ZP_03567069.1| GTPase EngB [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253317183|ref|ZP_04840396.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253734542|ref|ZP_04868707.1| GTPase [Staphylococcus aureus subsp. aureus TCH130] gi|255006458|ref|ZP_05145059.2| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794059|ref|ZP_05643038.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9781] gi|258415763|ref|ZP_05682034.1| GTP-binding protein engB [Staphylococcus aureus A9763] gi|258422000|ref|ZP_05684920.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9719] gi|258424090|ref|ZP_05686972.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9635] gi|258438242|ref|ZP_05689526.1| GTPase EngB [Staphylococcus aureus A9299] gi|258443700|ref|ZP_05692039.1| GTPase EngB [Staphylococcus aureus A8115] gi|258444938|ref|ZP_05693258.1| GTPase EngB [Staphylococcus aureus A6300] gi|258447992|ref|ZP_05696124.1| GTPase EngB [Staphylococcus aureus A6224] gi|258451812|ref|ZP_05699834.1| GTPase EngB [Staphylococcus aureus A5948] gi|258454300|ref|ZP_05702269.1| GTPase EngB [Staphylococcus aureus A5937] gi|262048648|ref|ZP_06021531.1| GTP-binding protein [Staphylococcus aureus D30] gi|269203291|ref|YP_003282560.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ED98] gi|282893169|ref|ZP_06301403.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8117] gi|282916933|ref|ZP_06324691.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus D139] gi|282920214|ref|ZP_06327939.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9765] gi|282929347|ref|ZP_06336914.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A10102] gi|283770738|ref|ZP_06343630.1| GTPase EngB [Staphylococcus aureus subsp. aureus H19] gi|284024722|ref|ZP_06379120.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 132] gi|294848695|ref|ZP_06789441.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9754] gi|295405984|ref|ZP_06815792.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8819] gi|296274899|ref|ZP_06857406.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MR1] gi|297207613|ref|ZP_06924048.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245090|ref|ZP_06928967.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8796] gi|304380735|ref|ZP_07363404.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54037057|sp|P64071|ENGB_STAAN RecName: Full=Probable GTP-binding protein EngB gi|54040980|sp|P64070|ENGB_STAAM RecName: Full=Probable GTP-binding protein EngB gi|56748964|sp|Q6G8Q2|ENGB_STAAS RecName: Full=Probable GTP-binding protein EngB gi|71151868|sp|Q5HF99|ENGB_STAAC RecName: Full=Probable GTP-binding protein EngB gi|119369263|sp|Q2FG63|ENGB_STAA3 RecName: Full=Probable GTP-binding protein EngB gi|119369264|sp|Q2FXQ8|ENGB_STAA8 RecName: Full=Probable GTP-binding protein EngB gi|119369265|sp|Q2YTB6|ENGB_STAAB RecName: Full=Probable GTP-binding protein EngB gi|166225986|sp|A7X395|ENGB_STAA1 RecName: Full=Probable GTP-binding protein EngB gi|172048935|sp|A6QHK7|ENGB_STAAE RecName: Full=Probable GTP-binding protein EngB gi|189037192|sp|A6U2E1|ENGB_STAA2 RecName: Full=Probable GTP-binding protein EngB gi|189037193|sp|A5ITJ8|ENGB_STAA9 RecName: Full=Probable GTP-binding protein EngB gi|189037194|sp|A8Z2J4|ENGB_STAAT RecName: Full=Probable GTP-binding protein EngB gi|13701470|dbj|BAB42764.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14247445|dbj|BAB57835.1| probable GTP-binding protein engB [Staphylococcus aureus subsp. aureus Mu50] gi|49244943|emb|CAG43404.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57284731|gb|AAW36825.1| GTP-binding protein, putative [Staphylococcus aureus subsp. aureus COL] gi|82656793|emb|CAI81222.1| probable GTP-binding protein [Staphylococcus aureus RF122] gi|87126070|gb|ABD20584.1| probable GTP-binding protein engB [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203036|gb|ABD30846.1| GTP-binding protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741223|gb|ABQ49521.1| GTP-binding protein, HSR1-related [Staphylococcus aureus subsp. aureus JH9] gi|149946673|gb|ABR52609.1| GTP-binding protein HSR1-related [Staphylococcus aureus subsp. aureus JH1] gi|150374579|dbj|BAF67839.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156722126|dbj|BAF78543.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368701|gb|ABX29672.1| possible GTP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253727483|gb|EES96212.1| GTPase [Staphylococcus aureus subsp. aureus TCH130] gi|257788031|gb|EEV26371.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9781] gi|257839356|gb|EEV63829.1| GTP-binding protein engB [Staphylococcus aureus A9763] gi|257842044|gb|EEV66473.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9719] gi|257845711|gb|EEV69743.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9635] gi|257848286|gb|EEV72277.1| GTPase EngB [Staphylococcus aureus A9299] gi|257851106|gb|EEV75049.1| GTPase EngB [Staphylococcus aureus A8115] gi|257856146|gb|EEV79061.1| GTPase EngB [Staphylococcus aureus A6300] gi|257858753|gb|EEV81624.1| GTPase EngB [Staphylococcus aureus A6224] gi|257860524|gb|EEV83350.1| GTPase EngB [Staphylococcus aureus A5948] gi|257863530|gb|EEV86289.1| GTPase EngB [Staphylococcus aureus A5937] gi|259163295|gb|EEW47854.1| GTP-binding protein [Staphylococcus aureus D30] gi|262075581|gb|ACY11554.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ED98] gi|269941154|emb|CBI49541.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus TW20] gi|282319420|gb|EFB49772.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus D139] gi|282589079|gb|EFB94180.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A10102] gi|282594562|gb|EFB99547.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9765] gi|282764487|gb|EFC04613.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8117] gi|283460885|gb|EFC07975.1| GTPase EngB [Staphylococcus aureus subsp. aureus H19] gi|283470941|emb|CAQ50152.1| probable GTP-binding protein EngB [Staphylococcus aureus subsp. aureus ST398] gi|285817357|gb|ADC37844.1| GTP-binding protein EngB [Staphylococcus aureus 04-02981] gi|294824721|gb|EFG41144.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A9754] gi|294968981|gb|EFG45002.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8819] gi|296887630|gb|EFH26528.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178170|gb|EFH37418.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus A8796] gi|298694944|gb|ADI98166.1| probable GTP-binding protein [Staphylococcus aureus subsp. aureus ED133] gi|302751500|gb|ADL65677.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340734|gb|EFM06665.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830052|emb|CBX34894.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130695|gb|EFT86681.1| GTPase EngB [Staphylococcus aureus subsp. aureus CGS03] gi|315198632|gb|EFU28960.1| GTPase EngB [Staphylococcus aureus subsp. aureus CGS01] gi|320140448|gb|EFW32302.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MRSA131] gi|320143986|gb|EFW35755.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MRSA177] gi|323440782|gb|EGA98491.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus O11] gi|323442937|gb|EGB00560.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus O46] gi|329314347|gb|AEB88760.1| Probable GTP-binding protein engB [Staphylococcus aureus subsp. aureus T0131] gi|329727177|gb|EGG63633.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 21172] gi|329728440|gb|EGG64877.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 21189] gi|329733169|gb|EGG69506.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus 21193] Length = 196 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 11 IISAVKEEQYPETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Sbjct: 71 E---------QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++++L + ++ TK DK+ Q+ ++ K + P ++ SS+ Sbjct: 122 TQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHIKNIKTQLDMDP--DDTIVSYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 + + + I I Sbjct: 180 QNNKQQQIWNLIEPYI 195 >gi|238650566|ref|YP_002916418.1| GTPase EngB [Rickettsia peacockii str. Rustic] gi|259645906|sp|C4K1B9|ENGB_RICPU RecName: Full=Probable GTP-binding protein EngB gi|238624664|gb|ACR47370.1| GTPase EngB [Rickettsia peacockii str. Rustic] Length = 212 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 103/203 (50%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN GRT+ Sbjct: 18 FRHQAKFVAGAMNINQIPNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTAGRTRQ 77 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + WG LI YL LR V LL Sbjct: 78 INFFNLAD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLL 128 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ + L + Sbjct: 129 IDSRRGIKENDKKVADLLLANKREFQIIFTKSDKVTD---HKNLHDEAHNFLATLNYSCN 185 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ S+ ++G L+ ++ + I Sbjct: 186 VMYVSNRSKEGARELKASLAKCI 208 >gi|294053817|ref|YP_003547475.1| ribosome biogenesis GTP-binding protein YsxC [Coraliomargarita akajimensis DSM 45221] gi|293613150|gb|ADE53305.1| ribosome biogenesis GTP-binding protein YsxC [Coraliomargarita akajimensis DSM 45221] Length = 216 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 9/198 (4%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F + P + PE AF GRSNVGKSSLIN+L +K LA TS+ PG+TQ +N F Sbjct: 7 VFRASAGALEDCPPSSLPEFAFVGRSNVGKSSLINMLTGKKGLAMTSSKPGKTQRINIFK 66 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D + LVD+PGYGYA+ K + + YL+ER L+ ++LL+D + Sbjct: 67 IND---------SWHLVDLPGYGYAKLSKSKQHDFNVHVSAYLNERENLKQIFLLVDSQL 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D +L+ + Y ++LTK D+ S + + ++ + + +++ S Sbjct: 118 EPQGGDLAFAEWLEHCKLPYSVILTKTDRSSDSKVRNHADQFIAALDEWGLKPNQLLRCS 177 Query: 193 SVKRKGIEVLRKAILETI 210 + KG + +I + Sbjct: 178 AKTSKGRTPILNSIEAQL 195 >gi|313887819|ref|ZP_07821499.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846162|gb|EFR33543.1| ribosome biogenesis GTP-binding protein YsxC [Peptoniphilus harei ACS-146-V-Sch2b] Length = 198 Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 67/191 (35%), Positives = 100/191 (52%), Gaps = 12/191 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 E P E AF+GRSNVGKSS IN ++NRKNLARTS+ PG+T+ +NF+ D Sbjct: 12 AVEEKQYPDTSIKEFAFAGRSNVGKSSFINAMLNRKNLARTSSTPGKTRTINFYKVND-- 69 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + LVD+PGYGYA+ K + W G+I RYL R L LL+D RH + Sbjct: 70 -------DLRLVDLPGYGYAKVAKTEKEKWAGIINRYLEHRDNLVETILLVDIRHEPTAL 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ ++ ++ + S ++ TK DK+ + + + + +IP SS K+ Sbjct: 123 DKQMYDYIIESGFSGIVIATKKDKIKKSQVDKHISVIAKKLGVKHKE--NIIPFSSSKKD 180 Query: 198 GIEVLRKAILE 208 ++ + I E Sbjct: 181 EVKDMW-FIFE 190 >gi|91206092|ref|YP_538447.1| GTPase EngB [Rickettsia bellii RML369-C] gi|157826475|ref|YP_001495539.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia bellii OSU 85-389] gi|119369249|sp|Q1RH06|ENGB_RICBR RecName: Full=Probable GTP-binding protein EngB gi|166225974|sp|A8GUK6|ENGB_RICB8 RecName: Full=Probable GTP-binding protein EngB gi|91069636|gb|ABE05358.1| Hypothetical GTP-binding protein [Rickettsia bellii RML369-C] gi|157801779|gb|ABV78502.1| GTPase EngB [Rickettsia bellii OSU 85-389] Length = 212 Score = 194 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 106/203 (52%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G +I LP P+IAF G+SNVGKSSLIN + N K LA+ SN PGRT+ Sbjct: 18 FRHQAKFVAGAMDIKQLPNFALPQIAFVGKSNVGKSSLINTICNNKKLAKVSNTPGRTRQ 77 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A+ P + D W LI YL + L+ V LL Sbjct: 78 INFFNLVD---------KLIIVDLPGYGFAQVPNQVKDQWEILINHYLRKSDNLKLVNLL 128 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ ++ L Sbjct: 129 IDSRRGIKENDKKVAELLLANKRDFQIIFTKSDKVTD---RKNLNLEAQNFLATLNYSCN 185 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 +I SS ++G L+ ++ + I Sbjct: 186 LIYVSSRSKEGARELKTSLAKCI 208 >gi|288817817|ref|YP_003432164.1| putative GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|288787216|dbj|BAI68963.1| putative GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|308751415|gb|ADO44898.1| ribosome biogenesis GTP-binding protein YsxC [Hydrogenobacter thermophilus TK-6] Length = 186 Score = 194 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 76/190 (40%), Positives = 107/190 (56%), Gaps = 17/190 (8%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LPK E+ F GRSNVGKSSLIN+LV +AR S PGRT+ +N F+ Sbjct: 11 EDLPKDHFKEVVFVGRSNVGKSSLINMLVGEP-VARVSKEPGRTRSINAFLL-------- 61 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQD 140 + LVD+PGYG+A+ K +SW LI Y ER +RCV++LID + G +D+ Sbjct: 62 -EGRIKLVDVPGYGFAKVSKAERESWKRLIESYFRERRQNIRCVFVLIDSKVGPTDLDKL 120 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +L + Y++VLTK DK S ++LE K + N EVI TS+ + KG + Sbjct: 121 MIEWLRHINIPYKVVLTKTDKASQKELSKSLELLKVVGVN------EVIITSAKEGKGKK 174 Query: 201 VLRKAILETI 210 L ++ILE + Sbjct: 175 ELYRSILEVV 184 >gi|257452226|ref|ZP_05617525.1| GTP-binding protein [Fusobacterium sp. 3_1_5R] gi|315917135|ref|ZP_07913375.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563] gi|317058769|ref|ZP_07923254.1| GTP-binding protein [Fusobacterium sp. 3_1_5R] gi|313684445|gb|EFS21280.1| GTP-binding protein [Fusobacterium sp. 3_1_5R] gi|313691010|gb|EFS27845.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 204 Score = 194 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 14/198 (7%) Query: 14 FLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +L+ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ +NFF Sbjct: 8 YLKSAVYEKDYPEILNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQLINFFT 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +VD+PGYG+A+ PK WG I RY+ + + V++L+D R Sbjct: 68 INQ---------EFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISKRK-KLVFVLLDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D ++ +LD + ++I+ TK DK+S L+ + I + + +V S Sbjct: 118 IPSEEDMEMLRWLDFHELPFKIIFTKTDKISNNEKFRLLKDIRKKIEFH---NEDVFFYS 174 Query: 193 SVKRKGIEVLRKAILETI 210 S+ KG E + + + +T+ Sbjct: 175 SLSHKGREEVLQFMEDTL 192 >gi|308233841|ref|ZP_07664578.1| small GTP-binding protein domain [Atopobium vaginae DSM 15829] Length = 195 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F LP + PEI F GRSNVGKSSLIN L+ RK LARTS+ PG+T ++NFF Sbjct: 10 FEAAYGTAQQLPASTTPEIIFCGRSNVGKSSLINKLLKRKALARTSSQPGKTANINFF-- 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N+ + VD+PGYG+A+ K + W LI Y + + V LID R Sbjct: 68 --------NVDGIRFVDLPGYGFAKVSKAERERWSSLISGYFEDNRSFNLVICLIDIRID 119 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +Q+D+D+ +++ + + Y + TK DKL+ + + L L + + I TS+ Sbjct: 120 AQQLDKDMLTYVIHEELPYVVAFTKADKLTHS---KALAARTKLCKALEVPQDKTIITSA 176 Query: 194 VKRKGIEVLRKAILET 209 +G+ LR+ I E Sbjct: 177 ETGEGMADLRRCIEEH 192 >gi|257465979|ref|ZP_05630290.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563] Length = 213 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 14/198 (7%) Query: 14 FLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +L+ P+ E AF GRSNVGKSSLIN L +R LARTS PGRTQ +NFF Sbjct: 17 YLKSAVYEKDYPEILNSVEFAFVGRSNVGKSSLINSLTSRTKLARTSKTPGRTQLINFFT 76 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +VD+PGYG+A+ PK WG I RY+ + + V++L+D R Sbjct: 77 INQ---------EFYIVDLPGYGFAKVPKAMKKEWGSTIERYIISKRK-KLVFVLLDIRR 126 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D ++ +LD + ++I+ TK DK+S L+ + I + + +V S Sbjct: 127 IPSEEDMEMLRWLDFHELPFKIIFTKTDKISNNEKFRLLKDIRKKIEFH---NEDVFFYS 183 Query: 193 SVKRKGIEVLRKAILETI 210 S+ KG E + + + +T+ Sbjct: 184 SLSHKGREEVLQFMEDTL 201 >gi|303248057|ref|ZP_07334323.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio fructosovorans JJ] gi|302490614|gb|EFL50519.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio fructosovorans JJ] Length = 210 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 12/195 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L +P P++A +GRSNVGKS+L+N L RK LA+ S PG+T+ LNF++ + Sbjct: 17 LATAYLTDQIPTVDAPQVALAGRSNVGKSTLVNCLAGRKGLAKISATPGKTRSLNFYMAQ 76 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 LVD+PGYGYAR + W LI YL + S LR V L+DCR Sbjct: 77 --------AAGYCLVDLPGYGYARCSMAEREKWAKLIDSYLKKTSRLRAVTALVDCRLPP 128 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 +++D ++ +L + + +VLTK DK + ++ + L R A P I S Sbjct: 129 QRLDVELVDWLRARRMPVLVVLTKADKCKQRDREARKKEWRELARP---AFPP-ILFSGK 184 Query: 195 KRKGIEVLRKAILET 209 G E L + + E Sbjct: 185 TGLGREALCRVLAEA 199 >gi|169334576|ref|ZP_02861769.1| hypothetical protein ANASTE_00979 [Anaerofustis stercorihominis DSM 17244] gi|169259293|gb|EDS73259.1| hypothetical protein ANASTE_00979 [Anaerofustis stercorihominis DSM 17244] Length = 193 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +SA I L + LP EI G+SNVGKSS IN L+NRK+LARTS+ PG+T+ Sbjct: 3 IRSAEI-LTSAAKFNQLPPEDKLEIVLIGKSNVGKSSFINNLLNRKSLARTSSVPGKTRT 61 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 N+++ + +VDMPGYGYA+ K ++ +I YL +R+ V+ L Sbjct: 62 ANYYIINN---------EFYIVDMPGYGYAKVSKSEKATFSNIITDYLKKRNADFIVFFL 112 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +D RH + D +++ + + +VLTK DK+S ++ ++ K + + Sbjct: 113 VDIRHKPSENDIKMYNEILDNDIYPVVVLTKADKISKNKRKQNIDLIKKTLG--LDEDDK 170 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 VI S+ ++ G + + I I Sbjct: 171 VIIFSTEEKLGRDEVWDFIEGFI 193 >gi|21283346|ref|NP_646434.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus MW2] gi|24418368|sp|Q8NW73|ENGB_STAAW RecName: Full=Probable GTP-binding protein EngB gi|21204786|dbj|BAB95482.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] Length = 196 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + PK E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 11 IISAVKEEQYPKTELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Sbjct: 71 E---------QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++++L + ++ TK DK+ Q+ ++ K + P ++ SS+ Sbjct: 122 TQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHIKNIKTQLDMDP--DDTIVSYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 + + + I I Sbjct: 180 QNNKQQQIWNLIEPYI 195 >gi|66818499|ref|XP_642909.1| hypothetical protein DDB_G0276985 [Dictyostelium discoideum AX4] gi|60471024|gb|EAL68994.1| hypothetical protein DDB_G0276985 [Dictyostelium discoideum AX4] Length = 743 Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats. Identities = 79/201 (39%), Positives = 110/201 (54%), Gaps = 11/201 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F S F+ I PE+AF GRSNVGKSSLIN L ++ LA+TS+ PG+TQ Sbjct: 253 FFDSKMKFIGAAKNIDSFLPETLPEVAFIGRSNVGKSSLINALT-QRGLAKTSDKPGQTQ 311 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N+F + LVD+PGYG+A A + V+ W + + YL+ER + CV++ Sbjct: 312 SINWFELG---------STLYLVDLPGYGFAFAKETLVEQWSDITIHYLTERKCISCVFI 362 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAH 185 LID RHG+K D+++ LDKK + I+LTK D P + + T I+ NY + Sbjct: 363 LIDSRHGLKDSDRNLLLELDKKKIKTHIILTKADLTKPEDLVKRISITNQEIQTNYRYST 422 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 V+P SS GI L K I Sbjct: 423 TPVLPISSKNLSGISDLSKLI 443 >gi|302333339|gb|ADL23532.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus JKD6159] Length = 196 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 11 IISAVKEEQYPETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Sbjct: 71 E---------QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHNP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++++L + ++ TK DK+ Q+ ++ K + P ++ SS+ Sbjct: 122 TQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHIKNIKTQLDMDP--DDTIVSYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 + + + I I Sbjct: 180 QNNKQQQIWNLIEPYI 195 >gi|328943788|ref|ZP_08241253.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium vaginae DSM 15829] gi|327491757|gb|EGF23531.1| ribosome biogenesis GTP-binding protein YsxC [Atopobium vaginae DSM 15829] Length = 203 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 103/196 (52%), Gaps = 13/196 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F LP + PEI F GRSNVGKSSLIN L+ RK LARTS+ PG+T ++NFF Sbjct: 18 FEAAYGTAQQLPASTTPEIIFCGRSNVGKSSLINKLLKRKALARTSSQPGKTANINFF-- 75 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N+ + VD+PGYG+A+ K + W LI Y + + V LID R Sbjct: 76 --------NVDGIRFVDLPGYGFAKVSKAERERWSSLISGYFEDNRSFNLVICLIDIRID 127 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +Q+D+D+ +++ + + Y + TK DKL+ + + L L + + I TS+ Sbjct: 128 AQQLDKDMLTYVIHEELPYVVAFTKADKLTHS---KALAARTKLCKALEVPQDKTIITSA 184 Query: 194 VKRKGIEVLRKAILET 209 +G+ LR+ I E Sbjct: 185 ETGEGMADLRRCIEEH 200 >gi|299137574|ref|ZP_07030755.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium sp. MP5ACTX8] gi|298600215|gb|EFI56372.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium sp. MP5ACTX8] Length = 204 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 94/204 (46%), Gaps = 11/204 (5%) Query: 12 WIFLRGVPEIGLLPK----AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 FL P PE+AF GRSNVGKSSLIN L+ K A+ S+ PGRT+ Sbjct: 5 PKFLLSAMSPDHFPDSVRTGDAPEVAFLGRSNVGKSSLINKLLGSKE-AKVSSTPGRTRA 63 Query: 68 LNFFVPKDFSNLK-NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NFF D + K P++ D+PGYGYA+ K W I YL+ER L Sbjct: 64 INFFALHDGTPQKFAARPSLIFADLPGYGYAKISKSISAEWPTFIEPYLNEREQLSLCIC 123 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D ++ D + + L + Y +V TK D+L ++L K + Sbjct: 124 LVDSNIPPQESDTMLINALQQMQRPYLVVATKSDRLGGNQLTKSLTALKKA-----HSVD 178 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 ++P SS G++ L I I Sbjct: 179 RILPVSSKTEAGVKTLWPEITNLI 202 >gi|162455894|ref|YP_001618261.1| GTP-binding protein [Sorangium cellulosum 'So ce 56'] gi|161166476|emb|CAN97781.1| predicted GTP-binding protein [Sorangium cellulosum 'So ce 56'] Length = 324 Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 105/207 (50%), Gaps = 12/207 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F F+ G + LP E+AF+GRSNVGKSSLIN LV RK L RTS+ PG T+ Sbjct: 94 FQIVDSSFVAGAGSLASLPPPVSAEVAFAGRSNVGKSSLINTLVERKGLVRTSSNPGSTR 153 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N + + + LVD+PGYG+ R K +W LI YL R TL V L Sbjct: 154 QINLYEAR-----ARDGAVFQLVDLPGYGFTRRSKSEQAAWASLIEGYLRGRVTLAAVLL 208 Query: 127 LIDCRHGVKQIDQDVFSFLD------KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-R 179 L+D R G+++ D ++ F++ ++ V +V TK+DK+ ++ + L++ R Sbjct: 209 LVDARRGLEEDDLELIRFIEASRDVARRPVELLLVATKVDKVQRSSVRRALDQLSAAAPR 268 Query: 180 NYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I SS+ +G L AI Sbjct: 269 MAGGGLRRAIGFSSITGEGRRDLWLAI 295 >gi|300911695|ref|ZP_07129139.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus TCH70] gi|300887116|gb|EFK82317.1| ribosome biogenesis GTP-binding protein YsxC [Staphylococcus aureus subsp. aureus TCH70] Length = 196 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + PK E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 11 IISAVKEEQYPKTELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD+PGYGYA+ K + +G +I Y+++R L+ V L+D RH Sbjct: 71 E---------QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRHDP 121 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D ++++L + ++ TK DK+ Q+ ++ K + P ++ SS+ Sbjct: 122 TQDDILMYNYLKHFDIPTLVICTKEDKIPKGKVQKHIKNIKTQLDMDP--DDTIVSYSSI 179 Query: 195 KRKGIEVLRKAILETI 210 + + + I I Sbjct: 180 QNNKQQQIWNLIEPYI 195 >gi|331703271|ref|YP_004399958.1| putative GTP binding protein EngB [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801826|emb|CBW53979.1| Probable GTP binding protein EngB [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 196 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ EI GRSNVGKSS IN L N LA+ SN PG+T+ LNFF Sbjct: 7 FITSAANKSNWIDDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLLNFFEI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD PGYGYA+ + ++ Y R L+ V+LL+D RH Sbjct: 67 N--------KGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ FL + I+ TK+DKL + + + K I Y + I S+ Sbjct: 119 PSNDDIMMYQFLKHYNIPVVIIGTKLDKLKKSEYIKNEKMIKETINFYQE--DDFIKISN 176 Query: 194 VKRKGIEVLRKAILETIN 211 + + I + I + + Sbjct: 177 LDKTNIIKCYELIDKLLG 194 >gi|328866113|gb|EGG14499.1| Putative GTP-binding protein [Dictyostelium fasciculatum] Length = 525 Score = 193 bits (492), Expect = 9e-48, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 107/201 (53%), Gaps = 11/201 (5%) Query: 7 FTKSAWIFLRGVP-EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + S + F+ E LLP++ PE+AF GRSNVGKSSLIN + + LA+TS+ PG T Sbjct: 275 YFHSKFKFIGAAKKEDSLLPESDTPEVAFIGRSNVGKSSLINAIT-LRGLAKTSDKPGLT 333 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q +N+F + LVD+PGYG+A A ++ D+W L V YL+ R +L+ V+ Sbjct: 334 QSINWFELG---------STLRLVDLPGYGFAFAKQEKSDTWNQLSVNYLTSRKSLKRVF 384 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID RHG K D+ + LDK QIVLTK D + I++Y Sbjct: 385 VLIDSRHGFKDSDRQLLDILDKNHTHTQIVLTKTDLSEQLDLAKRFTLVANEIKHYRHVQ 444 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 ++ SS KGI L I Sbjct: 445 DPILMVSSKTYKGIAELDTII 465 >gi|299473548|emb|CBN77943.1| YihA5, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 690 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 111/200 (55%), Gaps = 11/200 (5%) Query: 14 FLRGVPEIGLLP--KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 F + LP KA PE+ F GRSNVGKSSL+N+LVNRK LA TS PG TQH N++ Sbjct: 455 FETRAVSMKTLPSGKAALPEVVFVGRSNVGKSSLVNMLVNRKTLAPTSAVPGFTQHFNYY 514 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + P+ LVD+PG GYARA +DSW + RYL R LR V+ LID R Sbjct: 515 AVN---KGRRKSPSFFLVDVPGLGYARADDGRMDSWKSTLQRYLGVRENLRVVFHLIDGR 571 Query: 132 HGVKQIDQDVFSFLDKKA---VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHP 186 G+++ D+ + S + + SY +V+TK DK++ + EK + + +P P Sbjct: 572 TGLQKADEQLISLMMNENEGRSSYVVVVTKCDKVNDKKLKGVTEKVRQTLDKNGFPKTTP 631 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 VIPTS+ R+G L + Sbjct: 632 -VIPTSAKSRQGRVELLGYL 650 >gi|224145468|ref|XP_002325653.1| predicted protein [Populus trichocarpa] gi|222862528|gb|EEF00035.1| predicted protein [Populus trichocarpa] Length = 305 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + IF ++ F P G PEIAF+GRSNVGKSSL+N L + +ARTS+ Sbjct: 103 IEENIF-RNKLTFFAAAKVSSSFPPPGLPEIAFAGRSNVGKSSLLNSLTRQWGVARTSDK 161 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF L + LVD+PGYG+A A ++ DSW L+ Y+S R L Sbjct: 162 PGLTQTINFF----------ELGNVCLVDLPGYGFAYAKEEVKDSWEELVKEYVSMRVNL 211 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V LLID + G+K D+++ +++ YQ+V+TK D + P + + ++ Sbjct: 212 KRVCLLIDTKWGMKPRDRELIDLMERYQTKYQVVMTKTDLVFPIDVARRAMQIEESLKAN 271 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILE 208 + V+ SS GI +R + + Sbjct: 272 KSLVQPVMMVSSKSGAGIRSVRTVLSK 298 >gi|154249103|ref|YP_001409928.1| ribosome biogenesis GTP-binding protein YsxC [Fervidobacterium nodosum Rt17-B1] gi|154153039|gb|ABS60271.1| GTP-binding protein HSR1-related [Fervidobacterium nodosum Rt17-B1] Length = 201 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 109/192 (56%), Gaps = 13/192 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P E AF GRSNVGKSSL+N LV +K +A S PG+T +N+F+ + Sbjct: 22 DKFPHPLNGEYAFVGRSNVGKSSLLNALVGKK-VAFVSKNPGKTSTINYFLIDNR----- 75 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQD 140 VD+PGYGYA+ KK+ + W +I RY SERS ++ ++ LID RH + + D+ Sbjct: 76 ----FYFVDLPGYGYAKTSKKDRELWRKVIERYFSERSWNMKVMFSLIDSRHELMESDEQ 131 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + V ++LTKIDKL+ + + ++ + ++++Y +IP SS+ ++G++ Sbjct: 132 LLEWTQILGVKPVVLLTKIDKLNSSERLKQIKYFENILKSYGIE--RIIPCSSLTKEGLD 189 Query: 201 VLRKAILETINY 212 + I ET NY Sbjct: 190 EVWNVIFETQNY 201 >gi|34396175|gb|AAP55641.1| GTP binding protein [Spiroplasma citri] gi|110004356|emb|CAK98694.1| probable gtp binding protein [Spiroplasma citri] Length = 199 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 10/207 (4%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F ++ EIAF G+SNVGKSS +N+L N++ LA+ S PG+T Sbjct: 1 MFKFKNANYITSAVNKAGWINDDLFEIAFLGKSNVGKSSFLNMLTNQRQLAKVSQIPGKT 60 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + LNFF + +VD PGYG+A+ + + ++ YL++R L+ V Sbjct: 61 RMLNFFSINN--------NQFRIVDAPGYGFAKVGNQYKMDFAKMMEEYLTQRENLKFVC 112 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LL+D RH Q D +++ +L + ++ TK+DK+ Q+ + K + Sbjct: 113 LLVDLRHPPTQDDYEMYQYLKHFNILTVLIGTKLDKVKKNDIQKHEKMIKAKLN--FADS 170 Query: 186 PEVIPTSSVKRKGIEVLRKAILETINY 212 I TSS + + + +N+ Sbjct: 171 DYFIKTSSRNKIARDECWTLFAKLLNF 197 >gi|294101892|ref|YP_003553750.1| ribosome biogenesis GTP-binding protein YsxC [Aminobacterium colombiense DSM 12261] gi|293616872|gb|ADE57026.1| ribosome biogenesis GTP-binding protein YsxC [Aminobacterium colombiense DSM 12261] Length = 197 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + P PE+AF GRSNVGKS L+N L+ RK LA + PG+T+ +NF+ + Sbjct: 11 MTAFKEDQFPPQTLPEVAFVGRSNVGKSMLLNALMERK-LAHVGSTPGKTRSVNFYKIE- 68 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYA K + W LI +Y+++R TL+ + L+D RHG+ Sbjct: 69 ------AEVDFFLVDLPGYGYAARGFKEKEKWAKLIEQYITQRETLQLLVHLVDFRHGLL 122 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 + DQ++ ++ + + +V TK DK+S + L IR + S+ Sbjct: 123 KNDQELQEWISQIGIPSLVVFTKADKISKGRHKGMLHSY---IRKGLKSIEVPFIVSAQD 179 Query: 196 RKGIEVLRKAILETIN 211 + G+ R+ + + +N Sbjct: 180 KSGVGEFRQFLTQYLN 195 >gi|15892061|ref|NP_359775.1| GTPase EngB [Rickettsia conorii str. Malish 7] gi|15619181|gb|AAL02676.1| hypothetical GTP-binding protein [Rickettsia conorii str. Malish 7] Length = 236 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 102/203 (50%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I + PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ Sbjct: 42 FRHQAKFVAGAMNINQILNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQ 101 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + WG LI YL LR V LL Sbjct: 102 INFFNLAD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLL 152 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ + L Sbjct: 153 IDSRRGIKENDKKVADLLLANKREFQIIFTKSDKVTD---HKNLHDEAQNFLATLNYSCN 209 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ S+ ++G L+ ++ + I Sbjct: 210 VMYVSNRSKEGARELKASLAKCI 232 >gi|256384099|gb|ACU78669.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides subsp. capri str. GM12] gi|256384931|gb|ACU79500.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides subsp. capri str. GM12] gi|296455974|gb|ADH22209.1| ribosome biogenesis GTP-binding protein YsxC [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 196 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ EI GRSNVGKSS IN L N LA+ SN PG+T+ LNFF Sbjct: 7 FITSAANKSNWINDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLLNFFEI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD PGYGYA+ + ++ Y R L+ V+LL+D RH Sbjct: 67 N--------KGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ FL + I+ TK+DKL + + + K I Y + I S+ Sbjct: 119 PSNDDIMMYQFLKHYNIPVVIIGTKLDKLKKSEYIKNEKMIKETINFYQE--DDFIKISN 176 Query: 194 VKRKGIEVLRKAILETIN 211 + + I + I + + Sbjct: 177 LDKTNIIKCYELIDKLLG 194 >gi|239907036|ref|YP_002953777.1| probable GTP-binding protein EngB [Desulfovibrio magneticus RS-1] gi|239796902|dbj|BAH75891.1| probable GTP-binding protein EngB [Desulfovibrio magneticus RS-1] Length = 208 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 101/188 (53%), Gaps = 12/188 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP P+IA +GRSNVGKS+LIN L RK+LA+TS PG+T+ LNF++ Sbjct: 23 NQLPTLDAPQIALAGRSNVGKSTLINCLAGRKSLAKTSATPGKTRSLNFYM--------A 74 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYAR K+ D W LI YL+ TLR V LIDCR +++D ++ Sbjct: 75 ETQGYCLVDLPGYGYARCSKEERDKWAKLIEAYLATTKTLRAVTALIDCRLPPQRLDMEL 134 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 S+L + + + LTK +K+ + ++ + L + A P V+ S G E Sbjct: 135 VSWLRSRRIPVLVALTKAEKVPQRDREARKKEWRELAQP---AFPPVV-FSGKTGLGREA 190 Query: 202 LRKAILET 209 L + E Sbjct: 191 LCRVFAEA 198 >gi|313665181|ref|YP_004047052.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma leachii PG50] gi|312949369|gb|ADR23965.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma leachii PG50] Length = 196 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 61/198 (30%), Positives = 86/198 (43%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ EI GRSNVGKSS IN L N LA+ SN PG+T+ LNFF Sbjct: 7 FITSAANKNNWINDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLLNFFEI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD PGYGYA+ + ++ Y R L+ V+LL+D RH Sbjct: 67 N--------KGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRKNLKGVFLLLDLRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ FL + I+ TK+DKL + + K I Y + I S+ Sbjct: 119 PSNDDVMMYQFLKHYNIPVVIIGTKLDKLKRNEYIKNEKMIKETINFYQE--DDFIKISN 176 Query: 194 VKRKGIEVLRKAILETIN 211 + + I + I + + Sbjct: 177 LNKTNIIKCYELINKLLG 194 >gi|24418386|sp|Q92JC9|ENGB_RICCN RecName: Full=Probable GTP-binding protein EngB Length = 212 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 102/203 (50%), Gaps = 12/203 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + F+ G I + PEIAF G+SNVGKSSLIN + N KNLA+ SN PGRT+ Sbjct: 18 FRHQAKFVAGAMNINQILNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQ 77 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF D + +VD+PGYG+A P + WG LI YL LR V LL Sbjct: 78 INFFNLAD---------KLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLL 128 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 ID R G+K+ D+ V L +QI+ TK DK++ + L Sbjct: 129 IDSRRGIKENDKKVADLLLANKREFQIIFTKSDKVTD---HKNLHDEAQNFLATLNYSCN 185 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 V+ S+ ++G L+ ++ + I Sbjct: 186 VMYVSNRSKEGARELKASLAKCI 208 >gi|152990528|ref|YP_001356250.1| GTP-binding protein [Nitratiruptor sp. SB155-2] gi|151422389|dbj|BAF69893.1| GTP-binding protein [Nitratiruptor sp. SB155-2] Length = 202 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 16/203 (7%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 A F+ P I P A E+AF GRSNVGKSSL+N L +RKNLA++S PG+T+ +NF Sbjct: 6 ASKFVTSAPTIKQAPPASMSEVAFLGRSNVGKSSLLNALTDRKNLAKSSATPGKTKLINF 65 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + + + + VD+PGYGYA+A K + W + ++L+ R +R LID Sbjct: 66 FDVE--YKIGDKRFPLRFVDLPGYGYAKASKTLKNEWQKHLTQFLANRDAIRVFVHLIDA 123 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQI---VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH ID+ SFL QI V TK DKL ++ +P Sbjct: 124 RHPYMMIDEQTRSFLQSIKKKDQIVIEVFTKADKLKQKELAALKKR-----------YPN 172 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 + S++ ++GIE L+ ILE + Sbjct: 173 ALLISNMTKRGIEELKHKILEHV 195 >gi|223039886|ref|ZP_03610170.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter rectus RM3267] gi|222878895|gb|EEF13992.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter rectus RM3267] Length = 208 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 77/207 (37%), Positives = 106/207 (51%), Gaps = 21/207 (10%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 FL P+I L P A E+AF GRSNVGKSSLIN LVN+K LA++S+ PG+T+ +NF Sbjct: 6 NAKFLISAPDISLAPPANSSEVAFLGRSNVGKSSLINALVNQKGLAKSSSTPGKTRLINF 65 Query: 71 FVPKDFSNLKNNLPA-------MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 F + +KN + VD+PG+GYA+ K W + YL R+ ++ Sbjct: 66 FEVEYARGIKNEQDEVSEERANLTFVDLPGFGYAKVAKSMHAQWRKNLDEYLKFRANIKL 125 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV---LTKIDKLSPTTAQETLEKTKYLIRN 180 LID R QID+DV +L Q + LTK DKL+ + L + Sbjct: 126 FVHLIDSRQFDMQIDRDVNDYLQSFLRPDQKILNFLTKSDKLNQSRKSAVL-------KV 178 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 YP AH S++K+ GIE + I Sbjct: 179 YPGAH----FVSALKKTGIEKANELIF 201 >gi|42560838|ref|NP_975289.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81829403|sp|Q6MTV5|ENGB_MYCMS RecName: Full=Probable GTP-binding protein EngB gi|42492334|emb|CAE76931.1| GTP-binding protein [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320730|gb|ADK69373.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 196 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ EI GRSNVGKSS IN L N LA+ SN PG+T+ LNFF Sbjct: 7 FITSSANKSNWIDDDVSEICLIGRSNVGKSSFINSLTNNNKLAKISNTPGKTRLLNFFEI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD PGYGYA+ + ++ Y R L+ V+LL+D RH Sbjct: 67 N--------KGEYRLVDAPGYGYAKVDDNLKIQFAKMMEEYFINRRNLKGVFLLLDLRHK 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D ++ FL + I+ TK+DKL + + + K I Y + + S+ Sbjct: 119 PSNDDIMMYQFLKHYNIPVVIIGTKLDKLKKSEYVKNEKMIKETISFYQE--DDFVKISN 176 Query: 194 VKRKGIEVLRKAILETIN 211 + + I + I + + Sbjct: 177 LNKTNIIKCYELIDKLLG 194 >gi|296273481|ref|YP_003656112.1| ribosome biogenesis GTP-binding protein YsxC [Arcobacter nitrofigilis DSM 7299] gi|296097655|gb|ADG93605.1| ribosome biogenesis GTP-binding protein YsxC [Arcobacter nitrofigilis DSM 7299] Length = 202 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 106/203 (52%), Gaps = 17/203 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ I P EIAF GRSNVGKSSL+N L NRK LA++S+ PG+TQ +N+F Sbjct: 8 FMQSAQSISDSPGPDVAEIAFLGRSNVGKSSLLNTLTNRKGLAKSSSTPGKTQLINYFNI 67 Query: 74 KDFSNLKNNLPA---MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 K ++ +N +P VD+PG+GYA+ K W + YL +R L+ LID Sbjct: 68 KFKTDEENGMPPDLFARFVDLPGFGYAKVSKSLKAEWNKNLTNYLEQRPNLQMFIHLIDA 127 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIV---LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID++V FL+K Q++ TK DKL + +PE Sbjct: 128 RHPELEIDKNVDEFLEKIKRGDQLIVHAFTKTDKLKQND-----------LAKLKREYPE 176 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 I S++K++GI L+ I + Sbjct: 177 GIFISNLKKRGISDLQNKITGYL 199 >gi|94986513|ref|YP_594446.1| ribosome biogenesis GTP-binding protein YsxC [Lawsonia intracellularis PHE/MN1-00] gi|119369210|sp|Q1MSA1|ENGB_LAWIP RecName: Full=Probable GTP-binding protein EngB gi|94730762|emb|CAJ54124.1| predicted GTPase [Lawsonia intracellularis PHE/MN1-00] Length = 202 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 69/188 (36%), Positives = 97/188 (51%), Gaps = 13/188 (6%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 L + +IA +GRSNVGKSSLIN L RK LA+TS PG+T+ +NF+ Sbjct: 26 LEQNNILQIALAGRSNVGKSSLINALAGRKQLAKTSGTPGKTRSINFYAVY--------P 77 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD+PGYGYA+ K W LI YL S L+ LLIDCR +++D ++ Sbjct: 78 NTFMLVDLPGYGYAQCSKIERQHWAMLIEYYLKNCSKLKAFVLLIDCRIPPQKLDYELAE 137 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 F + VLTKIDK + ++ + L+ N + + SS KG++ L Sbjct: 138 FATSYCIPLIPVLTKIDKCKLVEQNKRQKEWRALLNNT-----QPLLVSSKNMKGVQQLW 192 Query: 204 KAILETIN 211 + I TI+ Sbjct: 193 ERIQYTID 200 >gi|302341537|ref|YP_003806066.1| ribosome biogenesis GTP-binding protein YsxC [Desulfarculus baarsii DSM 2075] gi|301638150|gb|ADK83472.1| ribosome biogenesis GTP-binding protein YsxC [Desulfarculus baarsii DSM 2075] Length = 197 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 11/205 (5%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 F F++ G P+ GPPE AF+GRSNVGKSSLIN L+ RKNL + S PGRT Sbjct: 2 DFVLHESAFMQSAVGPGGYPEPGPPEFAFAGRSNVGKSSLINCLLRRKNLVKVSQRPGRT 61 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q +NFF + A+ VD+PGYG+A+ P W +I YL R TL+ V Sbjct: 62 QQINFFALNN--------DALRFVDLPGYGFAKVPLAIKAGWKKMIESYLESRPTLKAVV 113 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +++D R D + +L + + +TK DKLS A + L K + + Y A Sbjct: 114 VIVDIRREPSPDDLMLLGWLLSLGLPAVVAVTKADKLSRNQAAQRLAKLRPQLAPYDAA- 172 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 + S+V +G + L + +L + Sbjct: 173 --PVVCSAVTGQGRQELWERLLARL 195 >gi|294866649|ref|XP_002764793.1| multidrug resistance protein, putative [Perkinsus marinus ATCC 50983] gi|239864540|gb|EEQ97510.1| multidrug resistance protein, putative [Perkinsus marinus ATCC 50983] Length = 2239 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 9/196 (4%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K + V + +P PE+A GRSN GKS+L+N L R+N ++TS PG T+ L Sbjct: 1500 KPWMKLHKNVWKREQIPPPVLPEVAVVGRSNCGKSTLVNTLAGRQN-SKTSKIPGSTESL 1558 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 F+ P + LVD+PGYG+A ++ W L + YLS RS L+ V +L+ Sbjct: 1559 LFW-------KMGKPPVLMLVDLPGYGFAYQGEEKRTEWTELSLFYLSHRSNLKRVLVLV 1611 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPE 187 D R G+ Q D+++ SFL++ V +Q+++TK D L P + L + ++ + + Sbjct: 1612 DARRGLMQSDREMISFLERYGVKWQVIVTKCDLLKPRFLAKRLVIMQQILDTEFKGSVGP 1671 Query: 188 VIPTSSVKRKGIEVLR 203 +IP S++ ++G++ LR Sbjct: 1672 MIPLSALAKQGVDELR 1687 >gi|269123059|ref|YP_003305636.1| GTP-binding protein HSR1-like protein [Streptobacillus moniliformis DSM 12112] gi|268314385|gb|ACZ00759.1| GTP-binding protein HSR1-related protein [Streptobacillus moniliformis DSM 12112] Length = 191 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 101/201 (50%), Gaps = 14/201 (6%) Query: 10 SAWIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 + + + ++ P+ EIAF GRSNVGKSSLIN +V R NLARTS PGRTQ + Sbjct: 4 KSAEYSKSCIKLSDYPEKMNNTEIAFVGRSNVGKSSLINTIVKRNNLARTSKTPGRTQLV 63 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 NFF+ VD+PGYG+A+ P +WG +I YL + V++L+ Sbjct: 64 NFFLVN---------KDRYFVDLPGYGFAKVPANIKKNWGNIISEYL-NSERKKVVFVLL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D R D ++ +L+ + Y I+ TK DKLS L++ K + ++ +V Sbjct: 114 DIRRVPSGEDIEMLEYLEHYNIEYYIIFTKCDKLSNNEKFRQLKEIKKKLE---FSNEDV 170 Query: 189 IPTSSVKRKGIEVLRKAILET 209 SS+K G + I + Sbjct: 171 FFHSSLKNIGTAEILDFIDKL 191 >gi|68074349|ref|XP_679089.1| GTP-binding protein [Plasmodium berghei strain ANKA] gi|56499746|emb|CAH95019.1| probable GTP-binding protein engb, putative [Plasmodium berghei] Length = 926 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 8/201 (3%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 K + + ++ LP PEIAF GRSN GKS+LIN L R N A+ S PG T+ + Sbjct: 92 KPRMVLYKVAIKVNELPP-KYPEIAFIGRSNSGKSTLINELCGRTNKAKVSKMPGCTKQI 150 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 +F+ L LVD+PGYG+A + ++ W + YL R+ L+ V++LI Sbjct: 151 HFYKIGKPCLL-------CLVDLPGYGFAHSKEELRLQWNEFTLFYLKNRTNLKKVFVLI 203 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 DCR G+K D+++F F D+ + YQIVL+K D L+ ++ I ++ + Sbjct: 204 DCRIGLKTSDKELFHFFDRYNIKYQIVLSKCDLLNTKDLAIKIQIMNEEILHFKNLEKNI 263 Query: 189 IPTSSVKRKGIEVLRKAILET 209 I SS+KR+ + LR I + Sbjct: 264 ISLSSLKRQNLNELRNEIAKY 284 >gi|330799251|ref|XP_003287660.1| hypothetical protein DICPUDRAFT_151784 [Dictyostelium purpureum] gi|325082338|gb|EGC35823.1| hypothetical protein DICPUDRAFT_151784 [Dictyostelium purpureum] Length = 1674 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 107/200 (53%), Gaps = 10/200 (5%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F S + + PE+AF GRSNVGKSSLIN L ++ +A+TS+ PG TQ Sbjct: 1437 FFDSKMKLIGSAKSLHSFLPETLPEVAFIGRSNVGKSSLINALT-QRGMAKTSDKPGFTQ 1495 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N++ + LVD+PGYG+A A ++SW + YL+ R TL+CVY+ Sbjct: 1496 SINWYEIG---------STLYLVDLPGYGFAFAKDVKLESWENITHEYLTTRKTLKCVYI 1546 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D RHG+K D+ + LDKK + IVLTK D + + ++ T ++NY + Sbjct: 1547 LVDARHGLKDSDRTLLLELDKKKIKTHIVLTKADLVLQINLAKRIQITTDELKNYHHSIL 1606 Query: 187 EVIPTSSVKRKGIEVLRKAI 206 +I SS G+ L K I Sbjct: 1607 PIITVSSRSLAGVADLSKQI 1626 >gi|257468337|ref|ZP_05632431.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] gi|317062611|ref|ZP_07927096.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] gi|313688287|gb|EFS25122.1| GTP-binding protein [Fusobacterium ulcerans ATCC 49185] Length = 196 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 14/198 (7%) Query: 14 FLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++ P+ E AF GRSNVGKSSLIN + RK LA+TS PGRTQ +N+F Sbjct: 8 FVKSAVYEKDYPEQLNNMEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQLINYFK 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + +VD+PGYG+A+ PK+ WG + RY++ + V++L+D R Sbjct: 68 INN---------EFFIVDLPGYGFAKVPKEMKAEWGKTMDRYIAS-PRKKLVFVLLDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 Q D ++ +LD + ++I+ TKIDK+S + +++ K I + + +V S Sbjct: 118 IPSQEDIEMLVYLDHHDIPFKIIFTKIDKVSNNEKFKVMKEIKKKIEFH---NEDVFFHS 174 Query: 193 SVKRKGIEVLRKAILETI 210 S+ G E + I + Sbjct: 175 SLSDNGKEDILNFIETML 192 >gi|157803283|ref|YP_001491832.1| ribosome biogenesis GTP-binding protein YsxC [Rickettsia canadensis str. McKiel] gi|166225975|sp|A8EXG4|ENGB_RICCK RecName: Full=Probable GTP-binding protein EngB gi|157784546|gb|ABV73047.1| GTP-binding protein [Rickettsia canadensis str. McKiel] Length = 219 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 107/208 (51%), Gaps = 13/208 (6%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 S +F A F+ G I +P PEIAF G+SNVGKSSLIN + N KNLA+ SN P Sbjct: 16 SSKLFRYQA-KFVAGAMNINQIPNFLLPEIAFIGKSNVGKSSLINTICNNKNLAKVSNIP 74 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRT +NFF D + +VD+PGYG+A P + W LI YL + LR Sbjct: 75 GRTGQINFFNLAD---------KLIIVDLPGYGFANVPISVKEQWEVLISYYLRNSNNLR 125 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 V LLID R G+K+ D+ V L K S+QI+ TK DK++ + L Sbjct: 126 LVNLLIDSRRGIKENDKKVAELLLKNKRSFQIIFTKFDKVTD---CKNLTDEAQNFLTTL 182 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETI 210 V+ SS ++G L+ ++ + I Sbjct: 183 HYSCNVMYVSSRSKEGARELKASLAKCI 210 >gi|257457897|ref|ZP_05623056.1| ribosome biogenesis GTP-binding protein YsxC [Treponema vincentii ATCC 35580] gi|257444610|gb|EEV19694.1| ribosome biogenesis GTP-binding protein YsxC [Treponema vincentii ATCC 35580] Length = 218 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 17/214 (7%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F++G P+ G PE AF GRSN GKSSLIN+L+NRKNL +T + PG T+ +NF Sbjct: 6 SAEFIKGAISSKQFPQTGVPEFAFFGRSNAGKSSLINMLLNRKNLVKTGSKPGMTREINF 65 Query: 71 FVPK--------------DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS 116 F+ N L + D+PGYG+A+ + ++ Y + Sbjct: 66 FIVNAPAKTCPEKNNTGVGAPQKNNALKVFTVADLPGYGFAQVSLPERNRIDTMLYDYCT 125 Query: 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 RS L+ ++ L+D R ++++ +F ++ ++ + TK DK+S + + Sbjct: 126 TRSELKIMFFLMDIRREPTDVERNTLAFFREQGINTVLTATKADKVSKNEQAKRITA--- 182 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 L + + ++ TSS K+ G E L + + + Sbjct: 183 LASFFDCSKDSIVLTSSTKKTGRETLLQHLSACL 216 >gi|225631246|ref|ZP_03787933.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591057|gb|EEH12252.1| GTP-binding protein [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 197 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 73/171 (42%), Positives = 102/171 (59%), Gaps = 8/171 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ G +I LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +N Sbjct: 7 SNCNFIFGASDIKTLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGY+ A K+ + + LI YL +R LR V++LID Sbjct: 67 FYSMYN--------DKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRRNLRRVFVLID 118 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + G+K+ID+D +L ++ IVLTKIDK+S + +E + I N Sbjct: 119 SKVGLKEIDKDFIYWLIYNNINLNIVLTKIDKVSQKSLGAVIEDIQKWINN 169 >gi|194430709|ref|ZP_03063138.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B171] gi|194411246|gb|EDX27639.1| ribosome biogenesis GTP-binding protein YsxC [Escherichia coli B171] Length = 197 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 96/199 (48%), Gaps = 11/199 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ V ++ LP PEIAF GRSNVGKSSLIN +NRK +A+ S+ PG T+ LNFF Sbjct: 7 FVKSVFKLEDLPPPEFPEIAFLGRSNVGKSSLINAFLNRKKVAKVSSTPGFTKALNFFRI 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYG+A+ P + W L+ YL R + L+ D R Sbjct: 67 D---------FKFYLVDLPGYGFAKVPVEVKKHWQYLVEGYLKAVRDFRNLVLIFDIRRN 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + F+ + IVL KID LS + + + P + S Sbjct: 118 PDEADIQLVEFVKHLKKPHCIVLNKIDTLSFREVERQASVYQKTFKPNPET--PLFLISC 175 Query: 194 VKRKGIEVLRKAILETINY 212 + KGI LR +L + + Sbjct: 176 KESKGIPQLRSHLLSCLGF 194 >gi|219122173|ref|XP_002181426.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407412|gb|EEC47349.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 197 Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 23/203 (11%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 IF+ G + P + E F GRSNVGKSSL+N++ NRK+LA TS PG+TQ NFF Sbjct: 5 IFVTGAVTMEGCPPSDRGEAVFIGRSNVGKSSLVNMVTNRKSLAYTSKRPGKTQQFNFFA 64 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +D + +VD+PG+GYA+ P++ W + Y++ R TLR ++ L+D RH Sbjct: 65 DQD---------SFNIVDLPGFGYAKVPEELRKEWSIFMDAYIANRKTLRVLFHLVDGRH 115 Query: 133 GVKQIDQDVF----SFLDKKAVSYQIVLTKIDKLSPTTAQE---------TLEKTKYLIR 179 G D + L A Y +VLTK DK A ++ + ++ Sbjct: 116 GPTDEDASIMRRVGDLLPGYAT-YVVVLTKADKNVKGAASNKKAGKVSSDVVDAVRQAMK 174 Query: 180 NYPTAHPEVIPTSSVKRKGIEVL 202 + VI TS+ + G + + Sbjct: 175 QNGVGNAPVILTSAETKLGRDDI 197 >gi|145351401|ref|XP_001420069.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580302|gb|ABO98362.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 201 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 12/206 (5%) Query: 10 SAWIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 + F + P G PEIA GRSNVGKSSL+N + A S PG T + Sbjct: 5 AKVAFESSSEDASDAPASDGLPEIALIGRSNVGKSSLLNSITFGAGAAAVSAKPGTTVSM 64 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N ++ LVD+PGYGYA+A + ++ W Y R L V LL+ Sbjct: 65 NHYLVD---------KKWRLVDLPGYGYAKADAEAIERWDAFTKDYFVRRENLAGVLLLV 115 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHP 186 D + D+ ++L + + IV TK D+ P + E + + P Sbjct: 116 DASVPPTENDERYANWLIEHETPFTIVFTKCDRDKPGMPSVDENKAALRRKLDEKWHRLP 175 Query: 187 EVIPTSSVKRKGIEVLRKAILETINY 212 +I TSSV +G + + K + I Y Sbjct: 176 SMISTSSVTAEGRDEVLKFVSSLIVY 201 >gi|73667065|ref|YP_303081.1| GTPase EngB [Ehrlichia canis str. Jake] gi|119369194|sp|Q3YS22|ENGB_EHRCJ RecName: Full=Probable GTP-binding protein EngB gi|72394206|gb|AAZ68483.1| GTP-binding domain [Ehrlichia canis str. Jake] Length = 200 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 76/201 (37%), Positives = 108/201 (53%), Gaps = 10/201 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ G + P PEIA +GRSNVGKSSLIN + N K A+TS+ PG T+ +N Sbjct: 8 SKCEFIIGATHVKSFPNFSIPEIAIAGRSNVGKSSLINAITNNKKNAKTSSRPGCTKQIN 67 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F++ M LVD+PGYGY++A + ++++ L+ YL L V LLID Sbjct: 68 FYLIN--------KSFMVLVDLPGYGYSKATRATINNYLFLMEYYLLNSKNLLKVILLID 119 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + G K+ID D ++L+ + YQ+VLTKID++S + K L N VI Sbjct: 120 VKVGFKEIDLDFINWLELNHIYYQLVLTKIDRVSKEILDVNINYIKNL--NLGFVIYPVI 177 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS ++GI L I + I Sbjct: 178 SASSKYKQGIGELIYEIAQCI 198 >gi|303278466|ref|XP_003058526.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459686|gb|EEH56981.1| predicted protein [Micromonas pusilla CCMP1545] Length = 523 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 103/193 (53%), Gaps = 12/193 (6%) Query: 9 KSAWIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 K A F LP PE+AF+GRSNVGKSSLIN + AR+S+ PG+TQ Sbjct: 213 KPACTFTHAATNEDSLPPPDDVPEVAFAGRSNVGKSSLINAIT-LSAAARSSDVPGKTQS 271 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LNF+ + +VDMPGYG+A A VD+W LI +YL+ R+ L+ VY++ Sbjct: 272 LNFYDVS---------RRLRIVDMPGYGFAFAAPDRVDAWNRLIDKYLTGRANLKRVYVV 322 Query: 128 IDCRHGVKQIDQDVFSFLDKK-AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ID RHG+K D+++ +FL K VSYQ+VL K D + P + +R A Sbjct: 323 IDARHGLKAPDREMLAFLSKYGGVSYQVVLNKTDLVKPGDLARRAFLIREELRLSKRARG 382 Query: 187 EVIPTSSVKRKGI 199 V S+ G+ Sbjct: 383 IVDMASTSTGAGV 395 >gi|320537214|ref|ZP_08037179.1| ribosome biogenesis GTP-binding protein YsxC [Treponema phagedenis F0421] gi|320145945|gb|EFW37596.1| ribosome biogenesis GTP-binding protein YsxC [Treponema phagedenis F0421] Length = 212 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 8/205 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F++G + P PE AF GRSNVGKSSLIN+LVNRKNL +T + PG T+ +NF Sbjct: 7 SAEFIKGAVKPEQYPSLPVPEFAFFGRSNVGKSSLINMLVNRKNLVKTGSRPGMTREVNF 66 Query: 71 FVPK-----DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 F+ S + ALVD+PGYGYA+ + ++ Y + R L+ ++ Sbjct: 67 FLVNRPSAVPVSEIAGKKNIFALVDLPGYGYAKVSGGVIQKIDSMLYDYCTNRQNLQTIF 126 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 LID R +I+++ +F + IV TK DKL + T+ + + Sbjct: 127 FLIDMRREPGEIEKNSIAFFQSYNIKVVIVGTKADKLKKNDLAKV---TRNWVDFFSVDA 183 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 +IP+S+ K+ G E + + E + Sbjct: 184 ESIIPSSASKKLGKERILACVEEQL 208 >gi|58697268|ref|ZP_00372648.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila simulans] gi|225630063|ref|YP_002726854.1| GTP-binding protein [Wolbachia sp. wRi] gi|254783220|sp|C0R5M1|ENGB_WOLWR RecName: Full=Probable GTP-binding protein EngB gi|58536385|gb|EAL59835.1| GTP-binding protein [Wolbachia endosymbiont of Drosophila simulans] gi|225592044|gb|ACN95063.1| GTP-binding protein [Wolbachia sp. wRi] Length = 197 Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats. Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 8/171 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S F+ G +I LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +N Sbjct: 7 SNCNFIFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQIN 66 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + LVD+PGYGY+ A K+ + + LI YL +R LR V++LID Sbjct: 67 FYSMYN--------DKFRLVDLPGYGYSHAGKEEIIQYLNLIEYYLIQRRNLRRVFVLID 118 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + G+K+ID+D +L +++ +VLTKIDK+S + +E + I N Sbjct: 119 SKVGLKEIDKDFIYWLICNNINFNVVLTKIDKVSQKSLGAVIEDIQRWINN 169 >gi|256544471|ref|ZP_05471844.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus vaginalis ATCC 51170] gi|256399796|gb|EEU13400.1| ribosome biogenesis GTP-binding protein YsxC [Anaerococcus vaginalis ATCC 51170] Length = 195 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P EIAF+GRSNVGKSS IN +++KNLA+TS+ PG+T+ +NF+ D Sbjct: 16 SQFPNDDFEEIAFAGRSNVGKSSFINSFLDKKNLAKTSSKPGKTKTINFYKIND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ K + W LI +YL ER L+ V+LL+D RH + D+++ Sbjct: 70 ---KFRLVDLPGYGYAKVSKTEKEKWNNLIHKYLYERENLKEVFLLVDIRHAPTKQDKEM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + ++ + ++ TK DK+ T ++ +++ + + SS+ V Sbjct: 127 YDWIIDSGFTGFVIATKYDKIPKTHLKKHIKEIMKTLNIDDEGL--IFAYSSITSHNKNV 184 Query: 202 LRKAILETIN 211 L + + +N Sbjct: 185 LLEQVEVIVN 194 >gi|283769488|ref|ZP_06342384.1| ribosome biogenesis GTP-binding protein YsxC [Bulleidia extructa W1219] gi|283103756|gb|EFC05142.1| ribosome biogenesis GTP-binding protein YsxC [Bulleidia extructa W1219] Length = 195 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 14/204 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 + ++ W + P+ PEI F GRSN GKSSLIN LVNR LA T PG+T+ Sbjct: 3 YYEAKW--MATAARPDQWPRHHLPEIVFVGRSNAGKSSLINALVNRNQLAYTGKTPGKTR 60 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 LNFFV D PGYGYA + ++ +G L+ Y +RS L+ + L Sbjct: 61 LLNFFVVN---------AQFVFTDAPGYGYAVGNRDSLIEFGNLMEPYFEKRSNLKAMVL 111 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 ++DCR + D + + ++ +V TK DKLS + ++ ++ Sbjct: 112 VLDCRRTPSREDIAMVDYAKANHLAILVVCTKKDKLSYGKLKNQQFMIAKELKLNASSF- 170 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 + SVK++GI+ + I ET+ Sbjct: 171 --LAVDSVKKQGIDEVWHKIHETL 192 >gi|78356993|ref|YP_388442.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|119369190|sp|Q30ZZ9|ENGB_DESDG RecName: Full=Probable GTP-binding protein EngB gi|78219398|gb|ABB38747.1| Small GTP-binding protein domain [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 218 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 13/198 (6%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 + + + + L P+IA +GRSNVGKSSL+N L RK LARTS+ PG+T+ + Sbjct: 2 QPKLVLENTIYTLEQLVSFNAPQIALAGRSNVGKSSLVNTLAGRKGLARTSSTPGKTRSI 61 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 NF+ K + +VD+PGYGYAR K + W LI RYL E + + +L+ Sbjct: 62 NFY--------KVDPDGYYVVDLPGYGYARCSKAEREKWAKLIRRYLVETPAVCAIAILL 113 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 DCR +++D ++ +F + + VLTK DK + + ++ Sbjct: 114 DCRLSPQKLDVELAAFARQAGLPLLPVLTKADKCKQQERALRQREWRTIL-----GGEVP 168 Query: 189 IPTSSVKRKGIEVLRKAI 206 + SS G + L + + Sbjct: 169 LLFSSKTGMGKDKLWQEL 186 >gi|237753230|ref|ZP_04583710.1| GTPase EngB [Helicobacter winghamensis ATCC BAA-430] gi|229375497|gb|EEO25588.1| GTPase EngB [Helicobacter winghamensis ATCC BAA-430] Length = 207 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 18/213 (8%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F FL + P E+AF GRSNVGKS+LIN+L N+KNLA++S+ PG+TQ Sbjct: 4 FILKNASFLTSAQNLSQCPPPMLSEVAFLGRSNVGKSTLINLLCNQKNLAKSSSTPGKTQ 63 Query: 67 HLNFFVPKDFSNLKN---NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 +NFF + +N ++ + + VD+PG+GYA+ K + W +V +L +R +R Sbjct: 64 LINFFATQWKANSQDSTQEVLKLMFVDLPGFGYAKVAKSQKELWNRNLVEFLRKRDCIRL 123 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKK---AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+D RH +ID ++ +F+++ + V TK DKL+ + Sbjct: 124 FVHLVDSRHPSLEIDANLVAFVEQFLRGDQRFVQVFTKFDKLNVNEQNK----------- 172 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAI-LETINY 212 A P + +SS+K+ + I T+ Y Sbjct: 173 LKAAFPNALFSSSLKKHNTPKIADFIVANTLGY 205 >gi|297621917|ref|YP_003710054.1| GTP-binding protein EngB [Waddlia chondrophila WSU 86-1044] gi|297377218|gb|ADI39048.1| GTP-binding protein EngB [Waddlia chondrophila WSU 86-1044] Length = 198 Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 97/206 (47%), Gaps = 18/206 (8%) Query: 11 AWIFLRGVPEIGLLPK------AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 +F++ P+ PEIA GRSNVGKSSL+N L RK L + S+ PG+ Sbjct: 5 EAVFVKTSVSGSDYPRLLDDQGNPLPEIAVLGRSNVGKSSLLNHLFQRKGLVKASSKPGK 64 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 T LNFF ++F A VD PGYG+A P WG ++ YL R L+ V Sbjct: 65 TAALNFFSIENFC---------AFVDFPGYGFADVPLHVKKQWGPMVQSYLENRKELKLV 115 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L D R + D + +L + V +VLTK DKL+ + + TK ++ + Sbjct: 116 LFLFDIRRTPNEEDLALVQWLLNEQVPTILVLTKSDKLNQSEKHQN---TKKILEAFGFE 172 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 + S K +G L K I ET+ Sbjct: 173 KFSYLLYSVPKNRGRNTLMKLIEETL 198 >gi|115496704|ref|NP_001069296.1| GTP-binding protein 8 [Bos taurus] gi|122144254|sp|Q0P5E7|GTPB8_BOVIN RecName: Full=GTP-binding protein 8 gi|112362316|gb|AAI20145.1| GTP-binding protein 8 (putative) [Bos taurus] gi|296491454|gb|DAA33507.1| GTP-binding protein 8 [Bos taurus] Length = 288 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 20/212 (9%) Query: 3 SHTIFTKSA---WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + + FT SA +L + P PE+ F GRSNVGKSSLI L + + R Sbjct: 81 AESFFTASARNRIEYLTSAVRLDHAPDLHRPEVCFIGRSNVGKSSLIKALFSLAPEVEVR 140 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ LNF+ + LVDMPGYGY RAP+ VD ++ YL E Sbjct: 141 VSKKPGHTKKLNFYKVGKY---------FTLVDMPGYGY-RAPEDFVD----MVETYLKE 186 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKY 176 R L +LL+D G+++ D ++ A+ Y +VLTKIDK S ++ L+ K+ Sbjct: 187 RKNLMRTFLLVDSVVGIQKADNIAIEMCEEFALPYVMVLTKIDKPSKGHLLKQVLQIQKF 246 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + P++ P S++ GI +LR I + Sbjct: 247 VDTKTQGCFPQLFPVSAMTYSGIHLLRCFIAD 278 >gi|255322560|ref|ZP_05363705.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter showae RM3277] gi|255300468|gb|EET79740.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter showae RM3277] Length = 207 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 106/207 (51%), Gaps = 21/207 (10%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 FL P+I L P A E+AF GRSNVGKSSLIN LVN+K+LA++S PG+T+ +NF Sbjct: 6 NAKFLISAPDISLAPPANSSEVAFLGRSNVGKSSLINTLVNQKSLAKSSLTPGKTRLINF 65 Query: 71 FVPKDFSNLKNNLPA-------MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 F + +KN + VD+PG+GYA+ K W + YL R+ ++ Sbjct: 66 FEVEYARGVKNEQGEPSEERANLTFVDLPGFGYAKVAKSMHAQWRKNLDEYLKFRANIKL 125 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV---LTKIDKLSPTTAQETLEKTKYLIRN 180 LID R QID+DV +L Q + LTK DKL+ + L + Sbjct: 126 FVHLIDSRQFDMQIDRDVNDYLQSFLRPDQKILNFLTKSDKLNQSQKSAVL-------KV 178 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 YP AH S++K+ G+E + I Sbjct: 179 YPGAH----FVSALKKIGVEKANELIY 201 >gi|114588504|ref|XP_001156883.1| PREDICTED: GTP-binding protein 8 isoform 2 [Pan troglodytes] Length = 284 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 105/211 (49%), Gaps = 20/211 (9%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + IFT ++ ++ I P PE+ F GRSNVGKSSLI L + + R Sbjct: 81 ADNIFTATERNRIDYVSSAVRIDHAPDLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVR 140 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF +VDMPGYG+ RAP+ VD ++ YL E Sbjct: 141 VSKKPGHTKKMNFFKVGKH---------FTVVDMPGYGF-RAPEDFVD----MVETYLKE 186 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKY 176 R L+ +LL+D G+++ D ++ A+ Y IVLTKIDK S ++ L+ K+ Sbjct: 187 RRNLKRTFLLVDSVVGIQKTDNTAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKF 246 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + P++ P S+V GI +LR I Sbjct: 247 VNMKTQGCFPQLFPVSAVTFSGIHLLRCFIA 277 >gi|298529510|ref|ZP_07016913.1| ribosome biogenesis GTP-binding protein YsxC [Desulfonatronospira thiodismutans ASO3-1] gi|298510946|gb|EFI34849.1| ribosome biogenesis GTP-binding protein YsxC [Desulfonatronospira thiodismutans ASO3-1] Length = 206 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 98/195 (50%), Gaps = 12/195 (6%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 L P+IA +GRSNVGKSSLIN L +K LAR S+ PG+T+ +NFF+ Sbjct: 9 TTSYTKDQLRFPDLPQIALAGRSNVGKSSLINSLAGQKKLARISSTPGKTRSINFFL--- 65 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LVD+PGYGYAR + + WG LI YL + L V LL+D R + Sbjct: 66 -----APQENFYLVDLPGYGYARCSRVEREKWGELIQEYLQDNHHLAGVVLLLDSRISPQ 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D D+ ++D VLTK DK + Q L++ + L+ AH I S+ Sbjct: 121 SSDLDLAHYVDSLQTRLLPVLTKADKCNQKQRQLALKRWQKLLER---AHKP-ILFSART 176 Query: 196 RKGIEVLRKAILETI 210 R+G + L +AI + Sbjct: 177 RQGQQALLEAIKNLV 191 >gi|124265624|ref|YP_001019628.1| ribosome biogenesis GTP-binding protein YsxC [Methylibium petroleiphilum PM1] gi|124258399|gb|ABM93393.1| putative GTP-binding cell division protein EngB [Methylibium petroleiphilum PM1] Length = 233 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 11/196 (5%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL + LP PEIAF GRSN GKS+ IN+L +K LA S PGRTQH+N Sbjct: 20 HTARFLTTAARMEHLPVNELPEIAFVGRSNAGKSTAINLLTQQKRLAFASKTPGRTQHIN 79 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + P D+PGYGYA + W ++ YL R +L V L++D Sbjct: 80 LFSLG-----PKDAPDALFADLPGYGYAAVARGAKLRWQQVMAEYLETRRSLSGVVLMVD 134 Query: 130 CRHGVKQIDQDVFSFLDKK----AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PT 183 R G ++DQ + +F+ + + ++LTK DKL+ A L + ++R Sbjct: 135 SRLGFTELDQQLLAFVAPRVGTGEIKLLVLLTKADKLNRREADAALAAAQGVLRQLATDD 194 Query: 184 AHPEVIPTSSVKRKGI 199 A + S++ R+G+ Sbjct: 195 ADLSLALFSALSRRGV 210 >gi|56549685|ref|NP_054889.2| GTP-binding protein 8 isoform 1 [Homo sapiens] gi|74728797|sp|Q8N3Z3|GTPB8_HUMAN RecName: Full=GTP-binding protein 8 gi|22713536|gb|AAH37163.1| GTP-binding protein 8 (putative) [Homo sapiens] gi|119600061|gb|EAW79655.1| GTP-binding protein 8 (putative), isoform CRA_c [Homo sapiens] gi|123982984|gb|ABM83233.1| GTP-binding protein 8 (putative) [synthetic construct] gi|123997661|gb|ABM86432.1| GTP-binding protein 8 (putative) [synthetic construct] gi|158258739|dbj|BAF85340.1| unnamed protein product [Homo sapiens] Length = 284 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 105/211 (49%), Gaps = 20/211 (9%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + IFT ++ ++ I P PE+ F GRSNVGKSSLI L + + R Sbjct: 81 ADNIFTATERNRIDYVSSAVRIDHAPDLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVR 140 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF +VDMPGYG+ RAP+ VD ++ YL E Sbjct: 141 VSKKPGHTKKMNFFKVGKH---------FTVVDMPGYGF-RAPEDFVD----MVETYLKE 186 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKY 176 R L+ +LL+D G+++ D ++ A+ Y IVLTKIDK S ++ L+ K+ Sbjct: 187 RRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKF 246 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + P++ P S+V GI +LR I Sbjct: 247 VNMKTQGCFPQLFPVSAVTFSGIHLLRCFIA 277 >gi|302563889|ref|NP_001181249.1| GTP-binding protein 8 [Macaca mulatta] Length = 284 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 71/197 (36%), Positives = 99/197 (50%), Gaps = 17/197 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF 71 ++ I P PE+ F GRSNVGKSSLI L + + R S PG T+ +NFF Sbjct: 95 YVSSAVRIDHAPDLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFF 154 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +VDMPGYGY RAP+ VD ++ YL ER L+ +LL+D Sbjct: 155 KVGKH---------FTVVDMPGYGY-RAPEDFVD----MVETYLKERRNLKRTFLLVDSV 200 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLIRNYPTAHPEVIP 190 G+++ D ++ A+ Y IVLTKIDK S ++ L+ K++ P++ P Sbjct: 201 VGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNTKTQGCFPQLFP 260 Query: 191 TSSVKRKGIEVLRKAIL 207 SSV GI +LR I Sbjct: 261 VSSVTFSGIHLLRSFIA 277 >gi|311269998|ref|XP_003132724.1| PREDICTED: GTP-binding protein 8-like isoform 1 [Sus scrofa] Length = 291 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 20/212 (9%) Query: 3 SHTIFTKSA---WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + +IFT SA ++ + P PE+ F GRSNVGKSSLI L + + R Sbjct: 81 AESIFTASARNRIDYVSSAVRLDHAPDLRCPEVCFIGRSNVGKSSLIKALFSFAPEVEVR 140 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF + LVDMPGYGY RAP+ VD ++ YL E Sbjct: 141 VSKKPGHTKKMNFFKVGRY---------FTLVDMPGYGY-RAPEDFVD----MVEDYLKE 186 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKY 176 R L +LL+D G+++ D ++ A+ Y +VLTKIDK S ++ L+ K+ Sbjct: 187 RRNLMRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVMVLTKIDKSSKGRLLKQVLQIQKF 246 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + P++ P S+V GI +LR I + Sbjct: 247 VDTETQGCFPQLFPVSAVTFSGIHLLRCFIAD 278 >gi|301099279|ref|XP_002898731.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262104804|gb|EEY62856.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 272 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 72/172 (41%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + + LP PEIAF+GRSN GKSSLIN L +K L RTS PGRTQ L+F Sbjct: 92 PSTLITSTSDPNDLPDWDVPEIAFAGRSNAGKSSLINALTRQKGLVRTSKTPGRTQQLHF 151 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLI 128 K +LP ++LVDMPG+G+A APKK VD W L+ Y+ R L+ LLI Sbjct: 152 LSVG---GKKGSLPELSLVDMPGFGFATAPKKVVDEWHTLVGGYIDNRRGNNLKTTMLLI 208 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 D R G+ D D FL YQ+V TK D +S ++ + K + + N Sbjct: 209 DARRGLGPADHDFMDFLHDLGALYQVVFTKADAVSRGDLEKQIHKAQDVALN 260 >gi|190570517|ref|YP_001974875.1| GTP-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019273|ref|ZP_03335080.1| GTP-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238058990|sp|B3CL86|ENGB_WOLPP RecName: Full=Probable GTP-binding protein EngB gi|190356789|emb|CAQ54151.1| GTP-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995382|gb|EEB56023.1| GTP-binding protein [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 197 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 11/179 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G + LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +NF+ Sbjct: 11 FIFGASDKKSLPDESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSM 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGY+ A K+ + LI YL R L+ V++LID + G Sbjct: 71 YN--------DKFRIVDLPGYGYSCASKEEAVQYLNLIEYYLIHRRNLKRVFVLIDSKVG 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +K+ID+D +L +++ IVLTKIDK++ + LE T+ + N H + S Sbjct: 123 LKEIDKDFVYWLICNNINFNIVLTKIDKVNQESLNAILENTQKWVNN---EHVSIHQIS 178 >gi|126325745|ref|XP_001366885.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 288 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 17/196 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF 71 +L + P + PEI F GRSNVGKSSLI L + + R S PG T+ +NFF Sbjct: 92 YLSSAVRLDHAPSSSSPEICFIGRSNVGKSSLIKALFSLVPEVEVRVSKKPGHTKKMNFF 151 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + LVDMPGYG+ +APK V+ ++ YL ER+ L +LL+D Sbjct: 152 KVGKY---------FTLVDMPGYGF-KAPKDFVE----MVEAYLKERTNLTRTFLLVDSV 197 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIP 190 G+++ D+ ++ A+ Y +VLTKIDK S + + + + + P++ P Sbjct: 198 VGIQKADRIAIEMCEEYALPYVMVLTKIDKASKGHIAKQVLQIQEFVDTQTQGCFPQLFP 257 Query: 191 TSSVKRKGIEVLRKAI 206 SSV GI +LR + Sbjct: 258 VSSVTYSGIHLLRCFM 273 >gi|310778381|ref|YP_003966714.1| ribosome biogenesis GTP-binding protein YsxC [Ilyobacter polytropus DSM 2926] gi|309747704|gb|ADO82366.1| ribosome biogenesis GTP-binding protein YsxC [Ilyobacter polytropus DSM 2926] Length = 196 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 19/206 (9%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + + KSA +F + PE + E AF GRSNVGKSSLIN + R+ LA+TS Sbjct: 3 IKQADYVKSA-VFEKDYPE-----EVASYEFAFVGRSNVGKSSLINSITGRRKLAKTSKT 56 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRTQ +N+F+ VD+PGYG+A+ PK + WG + YL+ Sbjct: 57 PGRTQLINYFIIN---------KEFFFVDLPGYGFAKVPKIMKEEWGKTMETYLASARQ- 106 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V++L+D R + D ++ +L+ + ++I+ TK+DKLS E + K + + Sbjct: 107 KLVFVLLDIRRIPSEDDINMLKWLEHYEIPFKIIFTKVDKLSNN---EKFKNLKNIKKKL 163 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V S++ G E + + Sbjct: 164 VFDNSDVFFHSALNHTGKEEILNYVE 189 >gi|255076201|ref|XP_002501775.1| predicted protein [Micromonas sp. RCC299] gi|226517039|gb|ACO63033.1| predicted protein [Micromonas sp. RCC299] Length = 430 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 13/195 (6%) Query: 8 TKSAWIFLRGVPEIGLLPK--AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 K A F+ LP+ PE+AF+GRSNVGKSSLIN + AR+S+ PG+T Sbjct: 202 NKKATKFVAAATTENDLPEADDDIPEVAFAGRSNVGKSSLINAVT-CSGAARSSDVPGKT 260 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 Q LNF+ + ++DMPGYG+A A ++ V++W L+ +YL+ R L+ VY Sbjct: 261 QSLNFYDVS---------RRIRIIDMPGYGFAFAAQEKVEAWNRLMDKYLTGRKNLKRVY 311 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +++D RHG+K D+++ +FL + V+Y +VL K D + P + +R A Sbjct: 312 VVVDARHGLKAPDREMLAFLSRYGNVAYSVVLNKTDLVRPADLARRCFLIREELRMAKRA 371 Query: 185 HPEVIPTSSVKRKGI 199 V S+ G+ Sbjct: 372 RSTVHMLSTNTGAGV 386 >gi|71894660|ref|YP_278768.1| GTPase EngB [Mycoplasma synoviae 53] gi|119369218|sp|Q4A5B4|ENGB_MYCS5 RecName: Full=Probable GTP-binding protein EngB gi|71851448|gb|AAZ44057.1| putative GTP-binding protein [Mycoplasma synoviae 53] Length = 187 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 76/195 (38%), Positives = 106/195 (54%), Gaps = 13/195 (6%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + F++ + EIAF GRSNVGKSSL+N L + K LA+ S PGRTQ +NFF Sbjct: 2 FKFVKSSSDYTNWYFHKNSEIAFWGRSNVGKSSLLNALTS-KGLAKVSKTPGRTQLINFF 60 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +N L + VD+PGYGYA+ K D +I YL RS L+ +YLLID R Sbjct: 61 --------ENELNQVY-VDLPGYGYAKLSKDLKDKMMAMIEEYLLNRSNLKMLYLLIDSR 111 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G +ID ++ SFL + ++Y IV TKIDKL+ E +K K + + + Sbjct: 112 LGFTKIDLEILSFLKENNLNYFIVFTKIDKLNTKEKNELNKKIKTYLEKESFNY---LIV 168 Query: 192 SSVKRKGIEVLRKAI 206 SS + I+ L++ I Sbjct: 169 SSETKYQIDKLKENI 183 >gi|226500762|ref|NP_001140242.1| hypothetical protein LOC100272283 [Zea mays] gi|194698666|gb|ACF83417.1| unknown [Zea mays] Length = 354 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 80/245 (32%), Positives = 104/245 (42%), Gaps = 55/245 (22%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P+ G PE A GRSNVGKSSL+N LV RK LA TS PG+TQ +N F Sbjct: 115 FVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFKV 174 Query: 74 KDFSNLKNNLPAMALVDMPGYG-------------------------------------- 95 D + LVD+PGYG Sbjct: 175 ND---------SWYLVDLPGYGPARPFLGEIEGESRALLLQILLEWIWQQSPTHGLSKKL 225 Query: 96 ---YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 YA AP++ +W Y R L V+LLID K+ID D S+L + V Sbjct: 226 VRIYASAPQEARTNWDEFTRNYFLSRENLVSVFLLIDASIPAKKIDLDYASWLGQNKVPM 285 Query: 153 QIVLTKIDKLSPTTA-----QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V TK DK +E +E + LIR Y A P I TSSV +G + + + Sbjct: 286 TLVFTKCDKRKKKKNGGRKPEENVETFQGLIREYFEAAPPWIMTSSVTNQGRDEILLHMS 345 Query: 208 ETINY 212 + NY Sbjct: 346 QLRNY 350 >gi|212702990|ref|ZP_03311118.1| hypothetical protein DESPIG_01028 [Desulfovibrio piger ATCC 29098] gi|212673578|gb|EEB34061.1| hypothetical protein DESPIG_01028 [Desulfovibrio piger ATCC 29098] Length = 222 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 66/184 (35%), Positives = 96/184 (52%), Gaps = 16/184 (8%) Query: 28 GPPE--IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 PE +A +GRSNVGKSSLIN L RK LA+ S PG+T+ +NF+ + + Sbjct: 18 DVPEAQVALAGRSNVGKSSLINALAVRKKLAKVSATPGKTRSINFYRVQPHN-------- 69 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD+PGYGYARA SW L+ +YLS LR + LL+D R +++D D+ F Sbjct: 70 FFLVDLPGYGYARASHSERRSWATLLEKYLSTCKNLRALALLLDSRLPPQKLDLDLAGFA 129 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +LTK DK + + ++ P + TSS KR G++ L + Sbjct: 130 RSCGLPLLPILTKADKCNQRERAARQAEWGEIVGVKP------VITSSSKRMGMDALWQR 183 Query: 206 ILET 209 ++E Sbjct: 184 LIEA 187 >gi|222626042|gb|EEE60174.1| hypothetical protein OsJ_13104 [Oryza sativa Japonica Group] Length = 694 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F ++ F P PEIAF+G SNVGKSSL+N L + + RTS+ Sbjct: 491 IEENVF-RNKLEFFAAAKISSSFPPPTLPEIAFAGVSNVGKSSLLNALTRQWGVVRTSDK 549 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF + LVD+PGYG+A A + DSW L+ Y+S R L Sbjct: 550 PGLTQTINFFRLA---------SKLCLVDLPGYGFAYAKDEVKDSWQELVKEYVSTRVGL 600 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V LL+ + G+K +D ++ +++ YQIVLTK D + P + + ++ Sbjct: 601 ERVCLLVHTKRGMKPLDYELVDLMERSKTPYQIVLTKTDLVFPIDVARRAVEIQESLKKN 660 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 + V+ SS G+ LR + Sbjct: 661 KSVVRPVMMVSSKTGAGVRNLRGVL 685 >gi|225434365|ref|XP_002276707.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 573 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +IF ++ F P PEIAF+GRSNVGKSS++N L + + RTS+ Sbjct: 370 IEESIF-RNKLTFFAAANVSSSFPPPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDK 428 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF ++LVD+PGYG+A A ++ DSW L+ Y+S R L Sbjct: 429 PGLTQTINFFKLG---------SKLSLVDLPGYGFAYAKEEVKDSWEELVKEYVSTRIGL 479 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V LLID + G+K D ++ +++ YQI+LTK D + P + + ++ Sbjct: 480 KRVCLLIDTKWGMKPRDHELIDLMERAQTKYQILLTKTDLVFPIDVARRAMQIEESLKAN 539 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 + ++ SS GI LR + Sbjct: 540 KSIVQPLMMVSSKSGAGIPSLRTVL 564 >gi|323697854|ref|ZP_08109766.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio sp. ND132] gi|323457786|gb|EGB13651.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio desulfuricans ND132] Length = 193 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 12/195 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ + EI L P+IA +GRSNVGKSSL+N L RK LA+ S+ PG+T+ LN++ Sbjct: 8 VKTIYEIKQLEDVDAPQIALAGRSNVGKSSLVNRLAGRKALAKISSKPGKTRSLNYY--- 64 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + LVD+PGYGYA+ K+ W LI Y++ + L+ V +L+D R Sbjct: 65 -----RVDPDGYYLVDLPGYGYAKCSKQERIKWAKLIEAYITGNTHLKAVAVLLDARLSP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 +++D ++ ++ ++ VLTK DK + ++ + +++ + SS Sbjct: 120 QKLDLELTGYVRGLSIPVIPVLTKADKPKQRELAQLQKQWQDILQQ----DRPPLLFSSK 175 Query: 195 KRKGIEVLRKAILET 209 KG E L + E Sbjct: 176 TGKGEEKLWARLGEY 190 >gi|31747868|gb|AAN10193.1| probable GTP-binding protein [Candidatus Fritschea bemisiae] Length = 197 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 73/198 (36%), Positives = 105/198 (53%), Gaps = 17/198 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + LP+ PEIA GRSNVGKSSLIN L+N K LA+ S+ PG+TQ +N+F+ Sbjct: 11 FLTSALKGEELPRLNLPEIAIVGRSNVGKSSLINHLLNAKGLAKVSSTPGKTQRINYFIV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + A+ LVD+PGYGYA A K+ +WG I YL R L+ + L+D R Sbjct: 71 DE---------ALLLVDLPGYGYAAASKQIQKNWGLWIDTYLKNRE-LKGLLFLLDSRRE 120 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + D + + +S +VLTK DKLS L++ + + P V+ S Sbjct: 121 LTREDAQFLRWASYENLSLLLVLTKADKLSQKEKHGALKRIQE--EKTLSEFPMVLY--S 176 Query: 194 VKRKGIEVLRKAILETIN 211 +KR R +++ IN Sbjct: 177 IKRG---ACRNFLIDAIN 191 >gi|291400673|ref|XP_002716748.1| PREDICTED: GTP-binding protein 8 isoform 2 [Oryctolagus cuniculus] Length = 289 Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 103/211 (48%), Gaps = 20/211 (9%) Query: 3 SHTIFTKSA---WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + + FT S +L + P PE+ F GRSNVGKSSLI L + + R Sbjct: 81 AESFFTASPRNRIEYLSSAVRLDHAPDLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVR 140 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF + LVDMPGYGY RAP+ VD ++ YL E Sbjct: 141 VSQKPGHTKKMNFFKVGKY---------FTLVDMPGYGY-RAPEDFVD----MVETYLKE 186 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKY 176 R L+ +LL+D G+ + D ++ A+ Y +VLTK DK S ++ L+ K+ Sbjct: 187 RRNLKRTFLLVDSVVGITKTDNIAIEMCEEFALPYVMVLTKTDKSSKGHLLKQVLQIQKF 246 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + P++ P S+V GI +L+ I Sbjct: 247 VNMQTQGCFPQLFPVSAVTHSGIHLLKCFIA 277 >gi|327269008|ref|XP_003219287.1| PREDICTED: GTP-binding protein 8-like [Anolis carolinensis] Length = 279 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 100/202 (49%), Gaps = 17/202 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFF 71 + + +P+ PE+ F GRSNVGKSSLI L + R S PG T+ +NFF Sbjct: 87 YYSSAVRMDHVPQLSLPEVCFLGRSNVGKSSLIKALFSLAPDVEVRVSKNPGHTKKMNFF 146 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 F LVDMPG+GY RAPK + ++ YL+ R L+ +LL+D + Sbjct: 147 KVGKF---------FTLVDMPGFGY-RAPKD----FAEMVEPYLNHRPNLQRTFLLVDAQ 192 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVIP 190 G+++ID L++ + Y +VLTKIDK S + K + ++ P++ P Sbjct: 193 VGIQEIDNIAIEMLEEFGIPYVLVLTKIDKASKRVMAMNVLKIQDFVKEKTQVCFPQLFP 252 Query: 191 TSSVKRKGIEVLRKAILETINY 212 SS+ GI +LR I Y Sbjct: 253 VSSLYYSGIHILRCFIAHVAGY 274 >gi|258646883|ref|ZP_05734352.1| ribosome biogenesis GTP-binding protein YsxC [Dialister invisus DSM 15470] gi|260404322|gb|EEW97869.1| ribosome biogenesis GTP-binding protein YsxC [Dialister invisus DSM 15470] Length = 211 Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 89/182 (48%), Gaps = 6/182 (3%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK--NNLPAMAL 88 EIAF GRSNVGKSSLIN L + LA S PG+T+ +N++ + + L Sbjct: 32 EIAFIGRSNVGKSSLINSLSGMRKLAYVSREPGKTRTINYYAVQSRRDTGSGEERQEWYL 91 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYG+A+ + N DSW G I Y+ L V LL+D RH ID + +L K Sbjct: 92 VDLPGYGFAKTSQANRDSWSGFIDEYIRNSENLVMVGLLVDLRHPGLPIDLKAYEWLKKI 151 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 A QI+ TK DK + L ++ A + SS+ G + L I E Sbjct: 152 APGLQIIGTKADKTGKNEMNKNLR----ILEKTFPADTAPLAYSSLSGTGRDKLLALIEE 207 Query: 209 TI 210 I Sbjct: 208 KI 209 >gi|289450320|ref|YP_003475210.1| ribosome biogenesis GTP-binding protein YsxC [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184867|gb|ADC91292.1| ribosome biogenesis GTP-binding protein YsxC [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 217 Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats. Identities = 66/186 (35%), Positives = 95/186 (51%), Gaps = 12/186 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G PE+ +GRSN GKSSLIN L N LAR S+ PG+TQ + +F N Sbjct: 40 PQDGLPEVVMAGRSNAGKSSLINALANNGKLARVSSNPGKTQLVVYF---------NVDQ 90 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L D+PGYGYAR + L Y + ++ V LLID RH + D+ + +F Sbjct: 91 KFYLTDLPGYGYARISLEKRSKLSSLANSYFIDGRPIKLVLLLIDIRHLPSEQDRQMCNF 150 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L++ + Y +VL K DKLS A + +K ++ + S+V + GI+ L+ Sbjct: 151 LNETEMPYVLVLNKADKLSRAQAGQNRQKI---LKALSAENIPNFIVSTVNKAGIDELKN 207 Query: 205 AILETI 210 I E I Sbjct: 208 FITEHI 213 >gi|50729618|ref|XP_416585.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 280 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 20/211 (9%) Query: 3 SHTIFTK---SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + FT A ++ + P + PE+ F GRSNVGKSSLI L + + R Sbjct: 72 AEVFFTSGRGHAIDYVSSAVRMDHAPPSALPEVCFIGRSNVGKSSLIRALFSLAPEVEVR 131 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF + LVDMPGYGY RAP+ VD ++ YL E Sbjct: 132 VSKTPGHTKKMNFFNVGKY---------FTLVDMPGYGY-RAPEDFVD----MVEAYLQE 177 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 R L+ +LL+D G++ D L++ + Y +VLTKID+ S + + + Sbjct: 178 RHNLKRTFLLVDAVVGIQSTDLIAVEMLEEFGIPYVMVLTKIDRASKGLLLKNVLGIQKF 237 Query: 178 IR-NYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 ++ P++ SSV+ G+ +LR + Sbjct: 238 VKEKTQGCFPQLFLVSSVEFSGVHLLRCFVA 268 >gi|269792561|ref|YP_003317465.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100196|gb|ACZ19183.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 201 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 12/189 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + +P PE+ GRSNVGKSSLIN ++ ++ LA+ S PG+T+ +NFF + Sbjct: 8 IACAYRYDQVPPHHLPEVVMVGRSNVGKSSLINAMIGQR-LAKVSKTPGKTRSVNFFEVQ 66 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 P LVD+PGYG+A ++ W LI RY + V L+D RHG Sbjct: 67 -------GDPPFVLVDLPGYGFAARSGGELELWRRLIERYFRSSR-VSLVLQLVDFRHGF 118 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ + +L + +V TK+DK+S + + L+ ++ SS Sbjct: 119 LKNDRQMEEYLAGLQIPVGVVFTKLDKVSGSRRKSALDAY---VKEGFRCSIGPFLVSSE 175 Query: 195 KRKGIEVLR 203 ++G+ L+ Sbjct: 176 TKEGLGDLK 184 >gi|312898490|ref|ZP_07757880.1| ribosome biogenesis GTP-binding protein YsxC [Megasphaera micronuciformis F0359] gi|310620409|gb|EFQ03979.1| ribosome biogenesis GTP-binding protein YsxC [Megasphaera micronuciformis F0359] Length = 218 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 6/194 (3%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 +L E P PEIAF GRSNVGKSSLIN L N++ LA+ S APG+T+ +NF Sbjct: 10 NPKYLTSAVEAKQYPCEERPEIAFLGRSNVGKSSLINSLCNQRGLAKVSGAPGKTRTINF 69 Query: 71 F--VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 F ++ + ++ + LVD+PGYG+A+ KN D W I Y+ L + LL+ Sbjct: 70 FTGELRERVDGESTRHPVYLVDLPGYGFAKTGGKNRDLWSRFIGDYIQSSKRLVLLCLLV 129 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D RH +D + +++L + QIV TK DKL+ + Q+ L + L +PT + Sbjct: 130 DLRHPGLYLDGEAYAWLRNNDIPLQIVCTKSDKLNQSEKQKNLNEINRL---FPTEYAA- 185 Query: 189 IPTSSVKRKGIEVL 202 + SS+K +G L Sbjct: 186 LAYSSLKGQGKNRL 199 >gi|332525044|ref|ZP_08401225.1| GTP-binding protein YsxC [Rubrivivax benzoatilyticus JA2] gi|332108334|gb|EGJ09558.1| GTP-binding protein YsxC [Rubrivivax benzoatilyticus JA2] Length = 210 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 96/208 (46%), Gaps = 15/208 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 FL + LP+ PEIAF GRSN GKS+ IN L ++ LA S PGRTQH+N Sbjct: 5 HTARFLTTASRLDQLPQGELPEIAFVGRSNAGKSTAINTLAQQRRLAFASRTPGRTQHIN 64 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + P D+PGYGYA + W ++ +YL R L V L+ID Sbjct: 65 LFEVG-----PKDAPDALFADLPGYGYAAVERSAKLRWQEVMAQYLELRRALHGVVLMID 119 Query: 130 CRHGVKQIDQDVFSFLDKK----AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 R G +D+ + + + + V VLTK DKL+ A L + ++ T Sbjct: 120 SRLGFTDLDRRLLALIAPRVANGEVRLLAVLTKCDKLNRREADAALAGAQQVLAEIATES 179 Query: 186 PEV--IPTSSVKRKGIEV----LRKAIL 207 E+ S++ R+G+ LR I Sbjct: 180 AEIGVAQFSALSRRGLGDVATTLRGWIA 207 >gi|302872193|ref|YP_003840829.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor obsidiansis OB47] gi|302575052|gb|ADL42843.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor obsidiansis OB47] Length = 204 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 13/193 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PE+ GRSNVGKSS IN + + LA+ + PG+T+ +NFF D Sbjct: 14 AVKKEDYPPIKMPEMCICGRSNVGKSSFINAVF-KDKLAKVGSTPGKTRTINFFNIDD-- 70 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 +VD+PGYGYA K+ W +I YL ER L+ LL+D RH + Sbjct: 71 -------KFRVVDLPGYGYAEVSKEEKRRWRKMIEEYLLERQELKLSVLLLDSRHLPTED 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + SF DKK + IVLTK DKLS + E + + S+ Sbjct: 124 DKIMLSFFDKKEIPIMIVLTKCDKLSNNELTKNTELISKELGIEKELFYQ---FSAKSGM 180 Query: 198 GIEVLRKAILETI 210 G++ ++ AI++ + Sbjct: 181 GVKQVQYAIIKFM 193 >gi|218885478|ref|YP_002434799.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756432|gb|ACL07331.1| small GTP-binding protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 254 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 63/183 (34%), Positives = 97/183 (53%), Gaps = 13/183 (7%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P+IA +GRSNVGKSSL+N L RK LA+ S PG+T+ +N++ K Sbjct: 21 DAPQIALAGRSNVGKSSLVNALARRKALAKISATPGKTRSINYYRVK--------PDGFY 72 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD+PGYGYA+ K+ W LI RYLS TL+ + +L+D R +Q+D D+ SF K Sbjct: 73 VVDLPGYGYAKCSKEERQKWAELIERYLSTCPTLKALTVLLDSRLEPQQLDLDLTSFARK 132 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 ++ VLTK DK S E + + ++ + S+ G++ L ++ Sbjct: 133 NGITLLPVLTKADKCSQRERAERQRQWRDIL-----GGIAPLVVSAKTGMGVDNLWASLR 187 Query: 208 ETI 210 + + Sbjct: 188 KVV 190 >gi|42522382|ref|NP_967762.1| GTP-binding protein [Bdellovibrio bacteriovorus HD100] gi|81829281|sp|Q6MPP2|ENGB_BDEBA RecName: Full=Probable GTP-binding protein EngB gi|39574914|emb|CAE78755.1| GTP-binding protein [Bdellovibrio bacteriovorus HD100] Length = 200 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 15/196 (7%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++ P E+A +GRSN GKSS IN L K +A+ S+ PG+T+ LNFF Sbjct: 15 QFIKSAVLEKDFPVHKKAEVAIAGRSNAGKSSFINALTKNK-IAKVSSTPGKTRLLNFFE 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + +VDMPGYG+A + W +I YL R LR + L++D R Sbjct: 74 LDQ---------SYVMVDMPGYGFAARSGDEMREWHRMIETYLMNREQLRGLLLVMDIRR 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + ++ + F +++ +VLTK DK+S + + + K K + V S Sbjct: 125 SWTEDEELLKEFSERRGFPLAVVLTKADKMSRSQMLQAVAKVKKA-----SGLSAVFGVS 179 Query: 193 SVKRKGIEVLRKAILE 208 ++K++G + + I E Sbjct: 180 ALKKEGQDAVEDYIYE 195 >gi|221506372|gb|EEE32007.1| GTP-binding protein, putative [Toxoplasma gondii VEG] Length = 428 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 14/210 (6%) Query: 3 SHTIFTKS-AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 S +F K A + + LP P++A G SNVGKSSL+N L++ +++AR+ + Sbjct: 199 SRILFGKPIAAHPVLVAQTLHKLPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSK 258 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+HL F + ++LVD+PGYG+AR + + W LI Y + L Sbjct: 259 PGRTRHLFTFDLGNH---------LSLVDLPGYGFARVKPQLKEEWAILIEEYFTRSKQL 309 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE----TLEKTKYL 177 R V L+D GV+ +D+ ++ L +K + +Q+VLTK D L+ L + + + Sbjct: 310 RRVLSLVDATKGVEALDERLWQLLAEKNLPFQVVLTKADLLTARELHAAMFDVLSRLQAV 369 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + HP V SS GI LR ++ Sbjct: 370 EKKETLLHPFVHAVSSRHNHGIPELRASLA 399 >gi|312880131|ref|ZP_07739931.1| ribosome biogenesis GTP-binding protein YsxC [Aminomonas paucivorans DSM 12260] gi|310783422|gb|EFQ23820.1| ribosome biogenesis GTP-binding protein YsxC [Aminomonas paucivorans DSM 12260] Length = 208 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 100/195 (51%), Gaps = 12/195 (6%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 E +P PEI +GRSNVGKSSLIN L+ K +A S PG+T+ +NFF Sbjct: 10 TTAYEAPQIPSLALPEIVIAGRSNVGKSSLINALLGAK-VAHVSGTPGKTRSINFFDV-- 66 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + P LVD+PGYG+A +K SWG +I RY R L+D RHG+ Sbjct: 67 -----SATPPFCLVDLPGYGFAARSRKERGSWGVVIERYFELRR-AVLAVQLVDFRHGLL 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D+ + SF + + +V TK+DK++PT L + R E + SS++ Sbjct: 121 GNDRQLESFFEALNLPVCVVFTKVDKIAPTKRAAVLSGYR---REGFRTTLEPVLVSSLR 177 Query: 196 RKGIEVLRKAILETI 210 R G+E L++ IL + Sbjct: 178 RDGLETLQETILGWV 192 >gi|237844091|ref|XP_002371343.1| GTP-binding protein, putative [Toxoplasma gondii ME49] gi|211969007|gb|EEB04203.1| GTP-binding protein, putative [Toxoplasma gondii ME49] Length = 428 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 14/210 (6%) Query: 3 SHTIFTKS-AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 S +F K A + + LP P++A G SNVGKSSL+N L++ +++AR+ + Sbjct: 199 SRILFGKPIAAHPVLVAQTLHKLPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSK 258 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+HL F + ++LVD+PGYG+AR + + W LI Y + L Sbjct: 259 PGRTRHLFTFDLGNH---------LSLVDLPGYGFARVKPQLKEEWAILIEEYFTRSKQL 309 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE----TLEKTKYL 177 R V L+D GV+ +D+ ++ L +K + +Q+VLTK D L+ L + + + Sbjct: 310 RRVLSLVDATKGVEALDERLWQLLAEKNLPFQVVLTKADLLTARELHAAMFDVLSRLQAV 369 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + HP V SS GI LR ++ Sbjct: 370 EKKETLLHPFVHAVSSRHNHGIPELRASLA 399 >gi|221485521|gb|EEE23802.1| GTP-binding protein, putative [Toxoplasma gondii GT1] Length = 499 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 14/210 (6%) Query: 3 SHTIFTKS-AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 S +F K A + + LP P++A G SNVGKSSL+N L++ +++AR+ + Sbjct: 270 SRILFGKPIAAHPVLVAQTLHKLPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSK 329 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PGRT+HL F + ++LVD+PGYG+AR + + W LI Y + L Sbjct: 330 PGRTRHLFTFDLGNH---------LSLVDLPGYGFARVKPQLKEEWAILIEEYFTRSKQL 380 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE----TLEKTKYL 177 R V L+D GV+ +D+ ++ L +K + +Q+VLTK D L+ L + + + Sbjct: 381 RRVLSLVDATKGVEALDERLWQLLAEKNLPFQVVLTKADLLTARELHAAMFDVLSRLQTV 440 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + HP V SS GI LR ++ Sbjct: 441 EKKETLLHPFVHAVSSRHNHGIPELRASLA 470 >gi|21672684|ref|NP_660751.1| GTPase EngB [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008425|sp|Q8K9C9|ENGB_BUCAP RecName: Full=Probable GTP-binding protein EngB gi|21623323|gb|AAM67962.1| hypothetical GTP-binding protein in polA-hemN [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 201 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 99/202 (49%), Gaps = 10/202 (4%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 I + FL+ + I + EIAF G SN GKSS IN L N+K LAR S PGR Sbjct: 2 IILNYNKTFFLKSISNISDIQIEHGIEIAFIGYSNSGKSSAINALTNQKKLARFSKTPGR 61 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F +VD+PGYGYA+AP W +I YL +L+ + Sbjct: 62 TQLINLFQVT---------SDFRIVDLPGYGYAKAPLLIKIKWQNMIYSYLKNSRSLKGL 112 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 LL+D R+ +K +DQD+ S + ++LTK DK + + +K + + Sbjct: 113 VLLMDIRYPLKILDQDIISMALNCKIPILLLLTKCDKFTINNQKIQFQKVYEKLDKFLNE 172 Query: 185 HPEVIPTSSVKRKGIEVLRKAI 206 + SS+K+ GIE L+ + Sbjct: 173 L-HIQLFSSLKKIGIEKLKSKL 193 >gi|330800863|ref|XP_003288452.1| hypothetical protein DICPUDRAFT_34085 [Dictyostelium purpureum] gi|325081511|gb|EGC35024.1| hypothetical protein DICPUDRAFT_34085 [Dictyostelium purpureum] Length = 451 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 11/206 (5%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 +++ F+K A + + + PK P++AF G+SN GKSSL+N ++NR ++A S Sbjct: 186 FANSFFSKGASLDSMAIKGVDF-PKKSYPQVAFLGKSNAGKSSLLNAILNR-DMAYVSKK 243 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG T+ +NF+ + + LVD+PGYG+A+ KK WG I YL L Sbjct: 244 PGCTKSINFYQLWE---------KIYLVDLPGYGFAKVSKKKSSVWGEAISEYLLTTPNL 294 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 ++LLID R G+ + D + +D+ VS+QIVLTKIDK P+ + + K +I Sbjct: 295 FKIFLLIDSRIGIHKNDIEAIELIDQHKVSFQIVLTKIDKTKPSILKGIYNQLKDIINET 354 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAIL 207 P +I TS+++ G+ +R IL Sbjct: 355 SCCLPTIIQTSALESSGLNEIRSVIL 380 >gi|328865389|gb|EGG13775.1| hypothetical protein DFA_11536 [Dictyostelium fasciculatum] Length = 453 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 105/204 (51%), Gaps = 10/204 (4%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F + + P P+IAF GRSNVGKSSL+N L+ + LA S PG TQ Sbjct: 206 FFSHQSKLVTMAIKKDDFPLHPFPQIAFLGRSNVGKSSLLNALLGNQ-LANVSKTPGCTQ 264 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NF+ D + LVD+PGYGY++ K WG I +L L ++L Sbjct: 265 SVNFYSIWD---------KLMLVDLPGYGYSKVSKDKAAVWGRSISEFLITSPHLIKLFL 315 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 LID R G ++ D +V LD V++QIVLTK+DK +P + K I + + P Sbjct: 316 LIDSRIGCQKNDLEVMKLLDDHRVAFQIVLTKVDKTTPNALKRIYRTLKETINDNVSCLP 375 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 V+ SS++ KGI+ +R IL+ Sbjct: 376 NVLQCSSIEMKGIQQIRSIILDVC 399 >gi|228923222|ref|ZP_04086512.1| GTP-binding protein YihA [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836428|gb|EEM81779.1| GTP-binding protein YihA [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 165 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 83/166 (50%), Gaps = 11/166 (6%) Query: 41 GKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP 100 GKSS IN ++NRK L R S+ PG+TQ LNFF+ + M VD+PGYGYA+ Sbjct: 2 GKSSFINKILNRKKLVRISSKPGKTQTLNFFLINEM---------MHFVDVPGYGYAKVS 52 Query: 101 KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 K +WG +I Y + R L L++D RH D ++ FL + I+ TK D Sbjct: 53 KSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTSDDVMMYDFLKHYEIPTIIIATKAD 112 Query: 161 KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K+ Q+ L+ K + + E++ SS G E KAI Sbjct: 113 KIPKGKWQKHLKVVKETLA--VESGDEIVLFSSETGLGKEEAWKAI 156 >gi|308807338|ref|XP_003080980.1| Predicted GTPase (ISS) [Ostreococcus tauri] gi|116059441|emb|CAL55148.1| Predicted GTPase (ISS) [Ostreococcus tauri] Length = 444 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 107/213 (50%), Gaps = 23/213 (10%) Query: 8 TKSAWIFLRGVPEIGLLPK------------AGPPEIAFSGRSNVGKSSLINILVNRKNL 55 K F+ G P PEIAF+GRSNVGKSSLIN L ++ Sbjct: 129 AKRNTKFIAAASREGEEPPAHAVGKGASKIKDDVPEIAFAGRSNVGKSSLINALT-LSSV 187 Query: 56 ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL 115 AR+S+ PG+TQ LNF+ + + LVD+PGYG+A A + V++W L+ RYL Sbjct: 188 ARSSDVPGKTQSLNFYSLGER---------IRLVDLPGYGFAFAKQARVETWNELMDRYL 238 Query: 116 SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA-VSYQIVLTKIDKLSPTTAQETLEKT 174 + R L+ VY+++D RHG+K D+++ +FL K ++L K D ++P Sbjct: 239 TSRPNLKRVYIVVDARHGLKASDREMLAFLSKYGETQCAVILNKCDCVNPNDLARRAYLI 298 Query: 175 KYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +R A V+ S+ G+ + + I Sbjct: 299 QEELRYTKRARTLVLMASTSTGAGVTEIAREIY 331 >gi|320106882|ref|YP_004182472.1| ribosome biogenesis GTP-binding protein YsxC [Terriglobus saanensis SP1PR4] gi|319925403|gb|ADV82478.1| ribosome biogenesis GTP-binding protein YsxC [Terriglobus saanensis SP1PR4] Length = 204 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 97/205 (47%), Gaps = 13/205 (6%) Query: 11 AWIFLRGVPEIGLLPKA----GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 FL + PK PE+AF GRSNVGKSSLIN L+ AR S+ PGRT+ Sbjct: 4 TPRFLLSAFDEAHFPKEAQTHNAPEVAFLGRSNVGKSSLINALLGGTQ-ARVSSTPGRTR 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NFF D P + D+PGYGYA+ K W G I YL++R TL Sbjct: 63 SINFFGLYDD---PRPQPEVIFADLPGYGYAKISKSISAEWSGFIDPYLADRETLALCIC 119 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D + D + ++L + + +V TK DKLS T ++ K Sbjct: 120 LVDTNIPPQPPDTQLINYLREIRRPFLVVGTKSDKLSNNTLGNSVLALKK-----GHGVD 174 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 EV+P S ++ I+ L IL T + Sbjct: 175 EVMPCSVKDQRNIKHLWARILATRD 199 >gi|327398616|ref|YP_004339485.1| GTP-binding protein engB [Hippea maritima DSM 10411] gi|327181245|gb|AEA33426.1| GTP-binding protein engB [Hippea maritima DSM 10411] Length = 213 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 18/201 (8%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 IF + LL G P+IAF+GRSNVGKSSLIN +++RK +A S PG+T +N Sbjct: 27 KKAIFEGSYEDARLL---GLPQIAFAGRSNVGKSSLINAILSRK-IAYVSKNPGKTVMIN 82 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 D +D+PGYGYAR K+ + W I YL + L V++L+D Sbjct: 83 AIKVNDR---------FYFIDLPGYGYARRSKQMRNKWRKTIEDYLKNSNLLYHVFVLVD 133 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH D +L ++ +V TK DK + + K I N+ Sbjct: 134 SRHLPMDNDIMFLDWLRFYKKTFSVVFTKTDKSTQKDISANISYLKKQIGNF-----SYF 188 Query: 190 PTSSVKRKGIEVLRKAILETI 210 TSS K++ I+ L I E + Sbjct: 189 LTSSKKKRDIDKLCDFIAERV 209 >gi|228954752|ref|ZP_04116774.1| GTP-binding protein YihA [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228960745|ref|ZP_04122384.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048186|ref|ZP_04193755.1| GTP-binding protein YihA [Bacillus cereus AH676] gi|229071978|ref|ZP_04205188.1| GTP-binding protein YihA [Bacillus cereus F65185] gi|229081735|ref|ZP_04214228.1| GTP-binding protein YihA [Bacillus cereus Rock4-2] gi|229111940|ref|ZP_04241484.1| GTP-binding protein YihA [Bacillus cereus Rock1-15] gi|229129761|ref|ZP_04258728.1| GTP-binding protein YihA [Bacillus cereus BDRD-Cer4] gi|229147039|ref|ZP_04275399.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST24] gi|229152671|ref|ZP_04280859.1| GTP-binding protein YihA [Bacillus cereus m1550] gi|229180745|ref|ZP_04308083.1| GTP-binding protein YihA [Bacillus cereus 172560W] gi|229192681|ref|ZP_04319640.1| GTP-binding protein YihA [Bacillus cereus ATCC 10876] gi|228590771|gb|EEK48631.1| GTP-binding protein YihA [Bacillus cereus ATCC 10876] gi|228602723|gb|EEK60206.1| GTP-binding protein YihA [Bacillus cereus 172560W] gi|228630817|gb|EEK87458.1| GTP-binding protein YihA [Bacillus cereus m1550] gi|228636427|gb|EEK92897.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST24] gi|228653677|gb|EEL09548.1| GTP-binding protein YihA [Bacillus cereus BDRD-Cer4] gi|228671504|gb|EEL26804.1| GTP-binding protein YihA [Bacillus cereus Rock1-15] gi|228701580|gb|EEL54073.1| GTP-binding protein YihA [Bacillus cereus Rock4-2] gi|228711137|gb|EEL63102.1| GTP-binding protein YihA [Bacillus cereus F65185] gi|228723173|gb|EEL74549.1| GTP-binding protein YihA [Bacillus cereus AH676] gi|228798961|gb|EEM45936.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804950|gb|EEM51547.1| GTP-binding protein YihA [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 165 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 82/166 (49%), Gaps = 11/166 (6%) Query: 41 GKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP 100 GKSS IN ++NRK L R S+ PG+TQ LNFF+ + M VD+PGYGYA+ Sbjct: 2 GKSSFINKILNRKKLVRISSKPGKTQTLNFFLINEM---------MHFVDVPGYGYAKVS 52 Query: 101 KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 K +WG +I Y + R L L++D RH D ++ FL + I+ TK D Sbjct: 53 KSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTSDDVMMYDFLKHYEIPTIIIATKAD 112 Query: 161 KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K+ Q+ L+ K + E++ SS G E KAI Sbjct: 113 KIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSETGLGKEEAWKAI 156 >gi|224044065|ref|XP_002189538.1| PREDICTED: similar to GTP-binding protein 8 [Taeniopygia guttata] Length = 238 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 20/211 (9%) Query: 3 SHTIFTK---SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 S +F ++ + P PE+ F GRSNVGKSSLI L + + R Sbjct: 30 SEALFRSDRGHPIDYVSSAVRMDHAPPPALPEVCFIGRSNVGKSSLIRALFSLAPEVEVR 89 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF + LVDMPGYGY + ++ YL E Sbjct: 90 VSKTPGHTKKMNFFKVGKY---------FTLVDMPGYGYRSP-----QDFVEMVEAYLQE 135 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 R L+ +LL+D G+++ D L++ + Y +VLTKID+ S + + + + Sbjct: 136 RHNLKRTFLLVDGVVGLQKTDHIAVEMLEEFGIPYVMVLTKIDRASRGLLLKNVLEIQEF 195 Query: 178 IRN-YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 ++ P++ SSV+ G+ +LR + Sbjct: 196 VKESTQGCFPQLFLVSSVEFSGVHLLRCFVA 226 >gi|169824742|ref|YP_001692353.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna ATCC 29328] gi|238687756|sp|B0S273|ENGB_FINM2 RecName: Full=Probable GTP-binding protein EngB gi|167831547|dbj|BAG08463.1| GTP-binding protein EngB family [Finegoldia magna ATCC 29328] Length = 201 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 11/192 (5%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 I P PEIAF GRSNVGKSS IN +++RKNLARTS+ PG+T+ +NF+ Sbjct: 15 IEQYPDESLPEIAFCGRSNVGKSSFINSILDRKNLARTSSKPGKTRTVNFY--------- 65 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 N LVD+PGYGYA+ K W +I YL+ R L V+L++D RH D++ Sbjct: 66 NANNEFRLVDLPGYGYAQTSKSEKKKWAQVIETYLNNRRNLYEVFLIVDIRHKPTVQDKE 125 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 +++++ + ++ TK+DK+ T ++ L K + + SS + + Sbjct: 126 MYNWIIQSGFCGFVIATKLDKIGKTMIKKNLNIIKKELNIDDDNL--IYEYSSTSKTNKK 183 Query: 201 VLRKAILETINY 212 + + + + Y Sbjct: 184 AVMEQLEMILKY 195 >gi|268679307|ref|YP_003303738.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurospirillum deleyianum DSM 6946] gi|268617338|gb|ACZ11703.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurospirillum deleyianum DSM 6946] Length = 200 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 16/200 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + G E+AF GRSNVGKSS+IN L N+K LA++S+ PG+T+ +NFF Sbjct: 9 FISSASSLANTTPEGLSEVAFIGRSNVGKSSIINALTNKKGLAKSSSTPGKTRLINFFNV 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 K+ + VD+PG+GYAR + W + +Y+ R ++R LID RH Sbjct: 69 LLSDEEKD--FTLQFVDLPGFGYARVSHSMKEEWQKHLTQYIERRISIRVFVHLIDSRHP 126 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + D++V ++L+ + TK DKL + + +NYP A I Sbjct: 127 FLESDKEVHAYLEGIVRPDQRILRIFTKADKLKQSD-------VSVIKKNYPDA----IL 175 Query: 191 TSSVKRKGIEVLRKAILETI 210 SS +KGI+ KAI ET+ Sbjct: 176 VSSSSKKGIDRALKAIFETV 195 >gi|74002698|ref|XP_849440.1| PREDICTED: hypothetical protein XP_844347 [Canis familiaris] Length = 288 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 104/211 (49%), Gaps = 20/211 (9%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + ++FT + ++ + P PE+ F GRSNVGKSSLI L + R Sbjct: 81 AESVFTAGGRHRIEYVSSAVRLDHAPDLPHPEVCFIGRSNVGKSSLIKALFSLAPDVEVR 140 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF + LVDMPGYGY RAP+ VD ++ YL E Sbjct: 141 VSKKPGHTKKMNFFKVGKY---------FTLVDMPGYGY-RAPEDFVD----MVETYLKE 186 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKY 176 R L +LL+D G+++ D ++ A+ Y +VLTKIDK S ++ L+ K+ Sbjct: 187 RRNLMRTFLLVDSVVGIQKTDNIAIGMCEEFALPYVMVLTKIDKSSKGHLLKQVLQIQKF 246 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + P++ P SSV GI +LR I Sbjct: 247 VESETQGCFPQLFPVSSVTYSGIHLLRCFIA 277 >gi|332225395|ref|XP_003261865.1| PREDICTED: GTP-binding protein 8-like isoform 1 [Nomascus leucogenys] Length = 284 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 17/202 (8%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQ 66 ++ ++ I P PE+ F GRSNVGKSSLI L + + R S PG T+ Sbjct: 90 RNRIDYVSSAVRIDHAPDLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTK 149 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NFF +VDMPGYGY RAP+ VD ++ YL ER L+ +L Sbjct: 150 KMNFFKVGKH---------FTVVDMPGYGY-RAPEDFVD----MVETYLKERRNLKRTFL 195 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLIRNYPTAH 185 L+D G+++ D ++ A+ Y IVLTKIDK S ++ L+ K++ Sbjct: 196 LVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNTKTQGCF 255 Query: 186 PEVIPTSSVKRKGIEVLRKAIL 207 P++ P S+V GI +LR I Sbjct: 256 PQLFPVSAVAFSGIHLLRCFIA 277 >gi|312127981|ref|YP_003992855.1| ribosome biogenesis gtp-binding protein ysxc [Caldicellulosiruptor hydrothermalis 108] gi|311778000|gb|ADQ07486.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor hydrothermalis 108] Length = 204 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 13/193 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PE+ GRSNVGKSS IN + + LA+ + PG+T+ +NFF Sbjct: 14 AVKKEDYPPIKMPEMCICGRSNVGKSSFINAVF-KDKLAKVGSTPGKTRTINFF------ 66 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD+PGYGYA K+ W +I YL ER L+ LL+D RH + Sbjct: 67 ---NIDNKFRVVDLPGYGYAEVSKEEKRRWRTMIEEYLLERQELKLSVLLLDSRHLPTED 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + F DKK + IVLTK DKLS + E + + S+ Sbjct: 124 DKIMLGFFDKKEIPIMIVLTKCDKLSNNELAKNTELISKELGIEKELFYQ---FSAKSGM 180 Query: 198 GIEVLRKAILETI 210 G++ ++ AI++ + Sbjct: 181 GVKQVQYAIIKFM 193 >gi|115377933|ref|ZP_01465117.1| GTP-binding protein [Stigmatella aurantiaca DW4/3-1] gi|115365038|gb|EAU64089.1| GTP-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 177 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 63/173 (36%), Positives = 89/173 (51%), Gaps = 5/173 (2%) Query: 35 SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGY 94 GRSNVGKSS+IN L RK L R SN PGRT+ LNFF + + + L D+PGY Sbjct: 1 MGRSNVGKSSMINTLTGRKKLVRVSNTPGRTRTLNFFDVELDRDGH--RHQVRLADLPGY 58 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 G+A+A K + W +I YL +R L V +ID G D +L +K + Sbjct: 59 GFAKASKADRVQWNEMITTYLDKRHRLEAVVSIIDAEIGPTPDDLQTLDYLQEKDRRVLV 118 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V TKID+L+ + ++ + A VI SSV + G++ + A+L Sbjct: 119 VATKIDRLAKARRKPRIQALAQQLDLPLEA---VIAFSSVDKIGVDEVWNALL 168 >gi|256830250|ref|YP_003158978.1| HSR1-like GTP-binding protein [Desulfomicrobium baculatum DSM 4028] gi|256579426|gb|ACU90562.1| GTP-binding protein HSR1-related [Desulfomicrobium baculatum DSM 4028] Length = 198 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 12/200 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S I + + I L + P++A +GRSNVGKSSL+N L RKNLA+ S+ PG+T+ LN Sbjct: 3 STVILEKTIYTIDQLEEMPLPQLALAGRSNVGKSSLLNKLTGRKNLAKISSTPGKTRSLN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + + LVD+PGYGYAR K + W LI RYL L V L+D Sbjct: 63 FY--------RVSPEEFYLVDLPGYGYARCSKTEREKWATLINRYLKNNPRLFGVVALLD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R + +D ++ +++ + + V+TK DK + L+ + Sbjct: 115 SRLPPQALDIELITYIRAQGMDVFPVMTKADKCKQPVRSANQVAWQRLL----GTEKPPL 170 Query: 190 PTSSVKRKGIEVLRKAILET 209 SS I+ L + L+ Sbjct: 171 LISSHSGMNIDKLWQFFLDK 190 >gi|189183737|ref|YP_001937522.1| Era/Obg family GTP-binding protein [Orientia tsutsugamushi str. Ikeda] gi|189180508|dbj|BAG40288.1| Era/Obg family GTP-binding protein [Orientia tsutsugamushi str. Ikeda] Length = 207 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 72/204 (35%), Positives = 107/204 (52%), Gaps = 15/204 (7%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 +F + FL G P PE F G+SNVGKSSLIN+L N+ +LAR S PGRT Sbjct: 15 LFLDAK--FLLGASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKHSLARVSKTPGRT 72 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + +NFF+ + + LVD+PGYGY++ +W LI+ YL R LR +Y Sbjct: 73 REINFFLIAN---------KLILVDLPGYGYSKTAVVTCKNWEKLILSYLENRKNLRLIY 123 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 +LID R G+K D V + + + +IV TK DK+S + +K L+ + Sbjct: 124 VLIDARRGIKDNDLAVINLVHHFNYTMKIVFTKEDKISDLEKNSLIATSKNLL----DYN 179 Query: 186 PEVIPTSSVKRKGIEVLRKAILET 209 ++I TS + G + ++ IL+ Sbjct: 180 DKIIFTSIRNKNGAQEIQYNILKY 203 >gi|224003151|ref|XP_002291247.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973023|gb|EED91354.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 175 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 63/153 (41%), Positives = 85/153 (55%), Gaps = 11/153 (7%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F+ G + P+A E+AF GRSNVGKSSL+N+L NRK+LA TS PG+TQ N+F Sbjct: 25 VFVTGAVGMDGCPEADRGEVAFIGRSNVGKSSLVNMLTNRKSLAFTSKTPGKTQQFNYFA 84 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D P +A G+G+A+ P+K W + +Y +R TLR V+ LID RH Sbjct: 85 VND-------KPELARQIRYGFGFAKVPQKQRQQWSDFMEQYFEQRETLRIVFHLIDARH 137 Query: 133 GVKQIDQDVFS----FLDKKAVSYQIVLTKIDK 161 G D ++ L K Y I+LTK DK Sbjct: 138 GPTDEDSNIMKKVSTILGSKKAQYVIILTKADK 170 >gi|119369278|sp|Q5GSS9|ENGB_WOLTR RecName: Full=Probable GTP-binding protein EngB Length = 197 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 69/175 (39%), Positives = 100/175 (57%), Gaps = 8/175 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ G +I LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +NF+ Sbjct: 11 FMFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSM 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG + A K + GL+ YL R LR V++LID + Sbjct: 71 YN--------DKFRLVDLPGYGCSHASKDETIQYLGLVEYYLIHRRNLRRVFVLIDSKVR 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 +K+ID+D +L +++ +VLTKIDK+ +E T+ I N + ++ Sbjct: 123 LKEIDKDFIYWLTYNNINFDVVLTKIDKVDRENLDAIIESTRKWINNESVSIRQI 177 >gi|145350092|ref|XP_001419457.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579688|gb|ABO97750.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 416 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 23/213 (10%) Query: 8 TKSAWIFLRGVPEIGLLPK------------AGPPEIAFSGRSNVGKSSLINILVNRKNL 55 +K F+ G P PEIAF+GRSNVGKSSLIN L ++ Sbjct: 73 SKRTAKFIAAAAREGEEPPKHAVGKGASKIKDDVPEIAFAGRSNVGKSSLINALT-LSSV 131 Query: 56 ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL 115 AR+S+ PG+TQ LNF+ + + LVD+PGYG+A A + V+SW L+ +YL Sbjct: 132 ARSSDVPGKTQSLNFYSMDER---------IRLVDLPGYGFAFAKQHRVESWNELMDKYL 182 Query: 116 SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA-VSYQIVLTKIDKLSPTTAQETLEKT 174 + R L+ VYL+ID RHG+K D+++ +FL K ++L K D ++P Sbjct: 183 TSRPNLKRVYLVIDARHGMKASDREMLAFLSKYGETQCGVILNKCDYVNPNELARRAYLI 242 Query: 175 KYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +R A V+ S+ G+ + + I Sbjct: 243 QEELRYTKRARTMVLMASTSTGAGVTEIAREIY 275 >gi|312877977|ref|ZP_07737918.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor lactoaceticus 6A] gi|311795251|gb|EFR11639.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor lactoaceticus 6A] Length = 204 Score = 184 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 13/193 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PE+ GRSNVGKSS IN + + LA+ + PG+T+ +NFF Sbjct: 14 AVKKDDYPPIKMPEMCICGRSNVGKSSFINAVF-KDKLAKVGSTPGKTRTINFF------ 66 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD+PGYGYA K+ W +I YL ER L+ LL+D RH + Sbjct: 67 ---NIDNKFRVVDLPGYGYAEVSKEEKRRWRTMIEEYLLERQELKLSVLLLDSRHLPTED 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + SF+DKK + IVLTK DKLS + E + + S+ Sbjct: 124 DKIMLSFVDKKEIPIMIVLTKCDKLSNNELAKNTELISKELGIEKELFYQ---FSAKSGM 180 Query: 198 GIEVLRKAILETI 210 G++ ++ AI++ + Sbjct: 181 GVKQVQYAIVKFM 193 >gi|312134775|ref|YP_004002113.1| ribosome biogenesis gtp-binding protein ysxc [Caldicellulosiruptor owensensis OL] gi|311774826|gb|ADQ04313.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor owensensis OL] Length = 204 Score = 184 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 13/193 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PE+ GRSNVGKSS IN + + LA+ + PG+T+ +NFF Sbjct: 14 AVKKEDYPPIKMPEMCICGRSNVGKSSFINAVF-KDKLAKVGSTPGKTRTINFF------ 66 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD+PGYGYA K+ W +I YL ER L+ LL+D RH + Sbjct: 67 ---NIDNKFRVVDLPGYGYAEVSKEEKRRWKKMIEEYLLERQELKLSVLLLDSRHLPTED 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + SF DKK + IVLTK DKLS + T+ + + S+ Sbjct: 124 DKIMLSFFDKKEIPIMIVLTKCDKLSNNELAKN---TELISKELGIEKELFYKFSAKSGM 180 Query: 198 GIEVLRKAILETI 210 G++ ++ AI + + Sbjct: 181 GVKQVQYAITKFM 193 >gi|282856770|ref|ZP_06266031.1| ribosome biogenesis GTP-binding protein YsxC [Pyramidobacter piscolens W5455] gi|282585393|gb|EFB90700.1| ribosome biogenesis GTP-binding protein YsxC [Pyramidobacter piscolens W5455] Length = 198 Score = 184 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 60/158 (37%), Positives = 83/158 (52%), Gaps = 8/158 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 I P PE+A +GRSNVGKSSL+N L +K LAR S+ PG T+ +NFF + Sbjct: 11 TAYRIQQFPAGSLPEVALAGRSNVGKSSLLNKLAGQK-LARVSSEPGMTRSVNFFDVQAP 69 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PG+GYA K W L+ Y+ R TL V L+D RHG+ Sbjct: 70 HP-------FTLVDLPGFGYASRSKDERKGWASLVEGYIERRGTLALVVHLVDIRHGLLD 122 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT 174 D+++ +L V Q+V TK DK++ T + + K Sbjct: 123 KDRELQEWLKALDVPMQVVFTKADKIAKTKRKSVIMKY 160 >gi|322435231|ref|YP_004217443.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium sp. MP5ACTX9] gi|321162958|gb|ADW68663.1| ribosome biogenesis GTP-binding protein YsxC [Acidobacterium sp. MP5ACTX9] Length = 203 Score = 184 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 92/201 (45%), Gaps = 11/201 (5%) Query: 11 AWIFLRGVPEIGLLPKA----GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 F+ P PEIAF GRSNVGKSSLIN L+ K A TS+ PGRT+ Sbjct: 4 TPEFMLSATNEAHFPVEAKTYNAPEIAFLGRSNVGKSSLINALLGSKQ-AHTSSTPGRTR 62 Query: 67 HLNFFVPKDFS-NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 +NFF + S + K P+M D+PGYGYA+ + W I YL+ER TL Sbjct: 63 AINFFALHEGSGDKKKIRPSMIFADLPGYGYAKISRSISAEWPSFIEPYLAERETLALAV 122 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 L+D + D + F Y +V TK D++S ++L K Sbjct: 123 CLVDTNIPPQPNDSQLIEFFKAMLKPYLVVGTKSDRISGNVLAKSLAALKKA-----HGV 177 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 E++P S+ G + L + Sbjct: 178 SEILPVSTKTEAGTKELWSRL 198 >gi|317131447|ref|YP_004090761.1| ribosome biogenesis GTP-binding protein YsxC [Ethanoligenens harbinense YUAN-3] gi|315469426|gb|ADU26030.1| ribosome biogenesis GTP-binding protein YsxC [Ethanoligenens harbinense YUAN-3] Length = 200 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 91/187 (48%), Gaps = 11/187 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F LP PEI FSGRSNVGKSS++N L N+KNLAR S+ PG+T +NF+ Sbjct: 11 FELSAYRAQDLPPCTVPEIVFSGRSNVGKSSMLNKLANQKNLARVSSVPGKTVSVNFYRC 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYGYA+A + W L+ YL R L+D R Sbjct: 71 -------DRPGDFRLVDLPGYGYAKAARAEKIKWSSLVESYLVGRP-AVLAVQLVDSRRS 122 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D D+ + ++++ + + +TK+DKL+ T L +IP S+ Sbjct: 123 LTADDADMLRYFREQSIPFVVTMTKMDKLNVTEQAARLAAFPP---ETGVEDARIIPFSA 179 Query: 194 VKRKGIE 200 G++ Sbjct: 180 RTGLGVD 186 >gi|297588712|ref|ZP_06947355.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna ATCC 53516] gi|297574085|gb|EFH92806.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna ATCC 53516] Length = 205 Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats. Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 11/191 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P PEIAF GRSNVGKSS IN +++RKNLARTS+ PG+T+ +NF+ N Sbjct: 20 EQYPDESLPEIAFCGRSNVGKSSFINSILDRKNLARTSSKPGKTRTVNFY---------N 70 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ K W +I YL+ R L V+L++D RH D+++ Sbjct: 71 ANNEFRLVDLPGYGYAQTSKSEKKKWAQVIETYLNNRRNLYEVFLIVDIRHKPTVQDKEM 130 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++++ + ++ TK+DK+ T ++ L K + + SS + + Sbjct: 131 YNWIIQSGFCGFVIATKLDKIGKTIIKKNLNIIKKELNIDDDNL--IYEYSSTSKTNKKA 188 Query: 202 LRKAILETINY 212 + + + + Y Sbjct: 189 VMEQLEMILKY 199 >gi|312793144|ref|YP_004026067.1| ribosome biogenesis gtp-binding protein ysxc [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180284|gb|ADQ40454.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor kristjanssonii 177R1B] Length = 204 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 13/193 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PE+ GRSNVGKSS IN + + LA+ + PG+T+ +NFF Sbjct: 14 AVKKDDYPPIKMPEMCICGRSNVGKSSFINAVF-KDKLAKVGSTPGQTRTINFF------ 66 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD+PGYGYA K+ W +I YL ER L+ LL+D RH + Sbjct: 67 ---NIDNKFRVVDLPGYGYAEVSKEEKRRWRTMIEEYLLERQELKLSVLLLDSRHLPTED 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + SF DKK + IVLTK DKLS + E + + S+ Sbjct: 124 DKIMLSFFDKKEIPIMIVLTKCDKLSNNELAKNTELISKELGIEKELFYQ---FSAKSGM 180 Query: 198 GIEVLRKAILETI 210 G++ ++ AI++ + Sbjct: 181 GVKQVQYAIVKFM 193 >gi|149926600|ref|ZP_01914860.1| GTPase EngB [Limnobacter sp. MED105] gi|149824529|gb|EDM83745.1| GTPase EngB [Limnobacter sp. MED105] Length = 204 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 7/189 (3%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P A PEI F+GRSN GKS+ IN L ++ LA S PGRTQ LNFF ++ Sbjct: 4 CPGASVPEIVFAGRSNAGKSTAINTLCKQRQLAYASKMPGRTQLLNFFHV-----IEQAE 58 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 P LVD+PGYG+A+ + + W + YL+ER +L L++DCR G+ ++D + Sbjct: 59 PIARLVDLPGYGFAQLAQTSQSVWDKELGSYLAERPSLVGTVLIVDCRRGLLELDYALIK 118 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--IPTSSVKRKGIEV 201 ++ + + I+L+K DK + L T+ + Y E+ S++K+ G+ Sbjct: 119 WVGHRQLPVHILLSKADKFNRQEQVLALRATQKALDPYRVNGHEITVQLWSALKKIGMVE 178 Query: 202 LRKAILETI 210 L + + Sbjct: 179 LETQLSNWV 187 >gi|115456183|ref|NP_001051692.1| Os03g0816400 [Oryza sativa Japonica Group] gi|28876002|gb|AAO60011.1| putative GTP-binding protein [Oryza sativa Japonica Group] gi|108711752|gb|ABF99547.1| expressed protein [Oryza sativa Japonica Group] gi|113550163|dbj|BAF13606.1| Os03g0816400 [Oryza sativa Japonica Group] Length = 571 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F ++ F P PEIAF+G SNVGKSSL+N L + + RTS+ Sbjct: 368 IEENVF-RNKLEFFAAAKISSSFPPPTLPEIAFAGVSNVGKSSLLNALTRQWGVVRTSDK 426 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF + LVD+PGYG+A A + DSW L+ Y+S R L Sbjct: 427 PGLTQTINFFRLA---------SKLCLVDLPGYGFAYAKDEVKDSWQELVKEYVSTRVGL 477 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V LL+ + G+K +D ++ +++ YQIVLTK D + P + + ++ Sbjct: 478 ERVCLLVHTKRGMKPLDYELVDLMERSKTPYQIVLTKTDLVFPIDVARRAVEIQESLKKN 537 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 + V+ SS G+ LR + Sbjct: 538 KSVVRPVMMVSSKTGAGVRNLRGVL 562 >gi|253581499|ref|ZP_04858724.1| GTP-binding protein [Fusobacterium varium ATCC 27725] gi|251836569|gb|EES65104.1| GTP-binding protein [Fusobacterium varium ATCC 27725] Length = 196 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 14/198 (7%) Query: 14 FLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F++ P+ E AF GRSNVGKSSLIN + RK LA+TS PGRTQ +N+F Sbjct: 8 FVKSAVYEKDYPEQLNNMEFAFVGRSNVGKSSLINSITGRKKLAKTSKTPGRTQLINYFK 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + +VD+PGYG+A+ PK+ WG + RY++ + V++L+D R Sbjct: 68 INN---------EFFIVDLPGYGFAKVPKEMKAEWGKTMDRYIAS-PRKKLVFVLLDIRR 117 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 Q D ++ +LD + ++I+ TK+DK+S + +++ K I + + +V S Sbjct: 118 IPSQEDIEMLVYLDHHDIPFKIIFTKMDKVSNNEKFKIMKEIKKKIEFH---NEDVFFHS 174 Query: 193 SVKRKGIEVLRKAILETI 210 S+ G E + I + Sbjct: 175 SLSDNGKEDILNFIETML 192 >gi|156082736|ref|XP_001608852.1| GTP-binding protein engB [Babesia bovis T2Bo] gi|154796102|gb|EDO05284.1| GTP-binding protein engB, putative [Babesia bovis] Length = 290 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 103/204 (50%), Gaps = 8/204 (3%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + + LP A PE+AF GR+N GKS LIN + R + PG T+ Sbjct: 35 IRPKLKLIATAIGHNDLPPAALPEVAFYGRTNAGKSCLINAICGRYGVCPVHELPGTTRK 94 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 L+F+ S + VDMPGYGY+ A W + YL R+TL+ + +L Sbjct: 95 LHFYKVGTPS-------TVIFVDMPGYGYSTAKDDLSMQWNEFSLSYLKHRNTLKLLVVL 147 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +DCR G+KQ D +V +F DK V +Q+VL K D + P + L K + + + +++ + Sbjct: 148 VDCRIGLKQSDLEVINFCDKYKVKWQVVLAKADMVKPVLVAKMLHKVRLELAIFRSSNGK 207 Query: 188 VIPTSSVKRKGIEVLRKAILETIN 211 I SS K + +E +R ILE N Sbjct: 208 PIAISSTKNQNLEEIRG-ILEHFN 230 >gi|125546199|gb|EAY92338.1| hypothetical protein OsI_14063 [Oryza sativa Indica Group] Length = 571 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +F ++ F P PEIAF+G SNVGKSSL+N L + + RTS+ Sbjct: 368 IEENVF-RNKLEFFAAAKISSSFPPPTLPEIAFAGVSNVGKSSLLNALTRQWGVVRTSDK 426 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF + LVD+PGYG+A A + DSW L+ Y+S R L Sbjct: 427 PGLTQTINFFRLA---------SKLCLVDLPGYGFAYAKDEVKDSWQELVKEYVSTRVGL 477 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V LL+ + G+K +D ++ +++ YQIVLTK D + P + + ++ Sbjct: 478 ERVCLLVHTKRGMKPLDYELVDLMERSKTPYQIVLTKTDLVFPIDVARRAVEIQESLKKN 537 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 + V+ SS G+ LR + Sbjct: 538 KSVVRPVMMVSSKTGAGVRNLRGVL 562 >gi|317486703|ref|ZP_07945520.1| ribosome biogenesis GTP-binding protein YsxC [Bilophila wadsworthia 3_1_6] gi|316922086|gb|EFV43355.1| ribosome biogenesis GTP-binding protein YsxC [Bilophila wadsworthia 3_1_6] Length = 211 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 63/187 (33%), Positives = 99/187 (52%), Gaps = 13/187 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 ++ +L + +IA +GRSNVGKSSL+N L RK LA+ S PG+T+ +NF+ Sbjct: 24 QLSVLEQRQEAQIALAGRSNVGKSSLVNALARRKQLAKISATPGKTRSINFYRVA----- 78 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 +LVD+PGYGYA+ ++ SW LI YL+ TL+ + LL+DCR + +D+ Sbjct: 79 ---PDGFSLVDLPGYGYAKCSQEERKSWAKLIEYYLTNTPTLKALALLLDCRIPPQALDR 135 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 D+ F + VLTK DK + + ++ L+ P +P SS +G+ Sbjct: 136 DLADFARGHGIPLLPVLTKADKCTQVERSKRQQEWSRLLN---GIMP--LPVSSKDMRGV 190 Query: 200 EVLRKAI 206 + L + Sbjct: 191 DALWSEL 197 >gi|21313623|ref|NP_079608.1| GTP-binding protein 8 isoform 1 [Mus musculus] gi|81904385|sp|Q9CY28|GTPB8_MOUSE RecName: Full=GTP-binding protein 8 gi|12846786|dbj|BAB27301.1| unnamed protein product [Mus musculus] gi|74190763|dbj|BAE28175.1| unnamed protein product [Mus musculus] gi|76827355|gb|AAI07217.1| GTP-binding protein 8 (putative) [Mus musculus] gi|148665632|gb|EDK98048.1| GTP-binding protein 8 (putative), isoform CRA_a [Mus musculus] Length = 285 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 106/212 (50%), Gaps = 20/212 (9%) Query: 3 SHTIF---TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + +IF ++ +L + P PE+ F GRSNVGKSSLI L + R Sbjct: 82 AESIFEATARNRIEYLSSAVRLDHAPSLQQPEVCFIGRSNVGKSSLIKALFSLAPDVEVR 141 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF LVDMPGYGY RAP+ VD ++ YL E Sbjct: 142 ISKKPGHTKKMNFFKVGKH---------FTLVDMPGYGY-RAPEDFVD----MVETYLKE 187 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKY 176 R+ L+ +LL+D G+ ++D ++ A+ Y ++LTKIDK S ++ L+ K+ Sbjct: 188 RNNLKRTFLLVDSVVGITKLDNIAIEMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQKF 247 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + P++ P S+V G+ +L+ I + Sbjct: 248 VNTQTQGCFPQLFPISAVTNSGVHLLKCFIAD 279 >gi|255553339|ref|XP_002517711.1| GTP binding protein, putative [Ricinus communis] gi|223543109|gb|EEF44643.1| GTP binding protein, putative [Ricinus communis] Length = 489 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 73/221 (33%), Positives = 107/221 (48%), Gaps = 24/221 (10%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + IF ++ F P PEIAF+GRSNVGKSSL+N L + +ARTS+ Sbjct: 272 IEENIF-RNKLTFFAAAKVSSSFPPPDLPEIAFAGRSNVGKSSLLNALTRQWGVARTSDK 330 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF P + LVD+PGYG+A A ++ D+W L+ Y+S R L Sbjct: 331 PGLTQTINFFSLG---------PKLCLVDLPGYGFAYAKEEVKDAWEDLVKEYVSTRVGL 381 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V LLID + G+K D ++ + +++ YQIVLTK D + P + + ++ Sbjct: 382 KRVCLLIDTKWGMKPRDHELINLMERSQTKYQIVLTKTDVVFPIDVARRAMQIEESLKAN 441 Query: 182 PTAHPEVI--------------PTSSVKRKGIEVLRKAILE 208 + V SS GI LR + + Sbjct: 442 KSIVQPVFFDVSQSNYVVFTQMMVSSKSGAGIRSLRTVLSK 482 >gi|301763876|ref|XP_002917368.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein 8-like [Ailuropoda melanoleuca] Length = 288 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 105/211 (49%), Gaps = 20/211 (9%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + ++F ++ ++ + P PE+ F GRSNVGKSSLI L + + R Sbjct: 81 AESVFMTTGRNRIEYVSSAVRLDHAPDLSHPEVCFIGRSNVGKSSLIKALFSLAPEVEVR 140 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF + +VDMPGYGY RAP+ VD ++ YL E Sbjct: 141 VSKKPGHTKKMNFFKVGKY---------FTVVDMPGYGY-RAPEDFVD----MVETYLKE 186 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKY 176 R L +LL+D G+++ D ++ A+ Y +VLTKIDK S ++ L+ K+ Sbjct: 187 RRNLMRTFLLVDSVVGIQKTDSIAIGMCEEFALPYVMVLTKIDKSSKGHLLKQVLQIQKF 246 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + P++ P SSV GI +LR I Sbjct: 247 VDSETQGCFPQLFPVSSVTYSGIHLLRCFIA 277 >gi|319956689|ref|YP_004167952.1| ribosome biogenesis GTP-binding protein ysxc [Nitratifractor salsuginis DSM 16511] gi|319419093|gb|ADV46203.1| ribosome biogenesis GTP-binding protein YsxC [Nitratifractor salsuginis DSM 16511] Length = 206 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 105/200 (52%), Gaps = 16/200 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ I E+ F GRSNVGKSS IN+L RKNLA++S PG+T+ +NFF Sbjct: 14 FVKSAQSINDSVDESLSEVVFLGRSNVGKSSTINLLAGRKNLAKSSATPGKTRLINFFDV 73 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + K+ + VD+PG+GYA+ K D W +V ++ R +R L D RH Sbjct: 74 GYKLDDKD--YTVRFVDLPGFGYAKVSKSMKDIWQKNLVEFIKNRVAIRLFIHLRDARHP 131 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID+DV ++ + Y V TK DKL+ L+R+YP A I Sbjct: 132 HAKIDEDVARYIGEFLRPDQRYLTVFTKADKLNQKERAA-------LLRDYPGA----IL 180 Query: 191 TSSVKRKGIEVLRKAILETI 210 S++K+ G E +++AI ETI Sbjct: 181 ISNLKKTGQERIQQAIFETI 200 >gi|304373098|ref|YP_003856307.1| GTPase EngB [Mycoplasma hyorhinis HUB-1] gi|304309289|gb|ADM21769.1| GTPase EngB [Mycoplasma hyorhinis HUB-1] Length = 184 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 17/199 (8%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F++ + + EI GRSNVGKSSLIN L N+K +A+TS PGRTQ +NFF Sbjct: 2 WTFIKSAADKFSWFEHLAQEICLIGRSNVGKSSLINALANQK-IAKTSKQPGRTQLINFF 60 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N +VD+PGYG+A+ ++ Y R+ L+ ++LID Sbjct: 61 ---------YNQQKQVIVDLPGYGFAKISISQKSLISSMLEEYFKSRTNLKITFVLIDSN 111 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G+ +D + FL + + I+ TKIDK++ + + + + L + E Sbjct: 112 VGITSLDLQMLDFLKQLKRNVVIIATKIDKINQSQKYKITKAIQEL-------NYECFLV 164 Query: 192 SSVKRKGIEVLRKAILETI 210 SS K+ GI + I + + Sbjct: 165 SSAKKIGISQINNFINQQL 183 >gi|326435855|gb|EGD81425.1| hypothetical protein PTSG_02146 [Salpingoeca sp. ATCC 50818] Length = 528 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 108/202 (53%), Gaps = 14/202 (6%) Query: 9 KSAWIFLRGVPEI--GLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 + FL G ++ +P G E+ F GRSNVGKSS+IN L R N ART + PG T Sbjct: 223 RRKLAFL-GAAKLPQSFIPAHDGVKEVCFIGRSNVGKSSVINAL-GRSNPARTEDKPGVT 280 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + +NF+ ++ +VD+PGYG+A A N + W + YLS+R+ LR ++ Sbjct: 281 KTVNFYAL--------EKSSVNVVDLPGYGFAFAKTDNQNEWQQTVEDYLSQRANLRRIF 332 Query: 126 LLIDCRHGVKQIDQDVFSFLDK-KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 +L+D RHG+K+ID D L AV +Q+VLTK D + L + + P A Sbjct: 333 VLLDARHGLKRIDIDFLHRLQATTAVPFQLVLTKCDLVPMDDIGRRLILLQQTLVELPGA 392 Query: 185 HPEVIPTSSVKRKGIEVLRKAI 206 +VI S+ G+ VLR+ + Sbjct: 393 IKDVITVSATSGAGMRVLRREV 414 >gi|148284762|ref|YP_001248852.1| GTP-binding protein [Orientia tsutsugamushi str. Boryong] gi|146740201|emb|CAM80484.1| Hypothetical GTP-binding protein [Orientia tsutsugamushi str. Boryong] Length = 186 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 69/195 (35%), Positives = 104/195 (53%), Gaps = 13/195 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + G P PE F G+SNVGKSSLIN+L N+ +LAR S PGRT+ +NFF+ Sbjct: 1 MLGASHKSQFPATNLPEFVFVGKSNVGKSSLINLLCNKHSLARVSKTPGRTREINFFLIA 60 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + LVD+PGYGY++ +W LI+ YL +R LR +Y+LID R G+ Sbjct: 61 N---------KLILVDLPGYGYSKTAVVTCKNWEKLILSYLEDRKNLRLIYVLIDARRGI 111 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 K D V + + + +IV TK DK+S + +K L+ + ++I TS Sbjct: 112 KDNDLAVINLVHHFNYTMKIVFTKEDKISDLEKNSLIATSKNLL----DYNDKIIFTSIR 167 Query: 195 KRKGIEVLRKAILET 209 + G + ++ IL+ Sbjct: 168 NKNGTQEIQYNILKY 182 >gi|291460374|ref|ZP_06599764.1| ribosome biogenesis GTP-binding protein YsxC [Oribacterium sp. oral taxon 078 str. F0262] gi|291416941|gb|EFE90660.1| ribosome biogenesis GTP-binding protein YsxC [Oribacterium sp. oral taxon 078 str. F0262] Length = 227 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 13/190 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 L ++ PE +GRSNVGKSS IN + RK+ AR S+ PG+T+ +NF+ Sbjct: 16 SELFRSREPEFVMAGRSNVGKSSFINSFIRRKSYARISSTPGKTRTINFYYVN------- 68 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + LVD+PGYGYA + W +I +YL ++ V LL+D RH + D + Sbjct: 69 --GSFYLVDLPGYGYAATGAVEQEKWDRMIRKYLRGSESIEEVILLVDIRHDPTKQDIQM 126 Query: 142 FSFL-DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 F ++ D ++LTK DK+ T ++ + ++ +IP S+ R+G+E Sbjct: 127 FRWIVDATGYEPIVILTKSDKIGKTQLEKRESSIRAVLGASDAC--RLIPFSARSRQGLE 184 Query: 201 VLRKAILETI 210 + I +++ Sbjct: 185 EI-YEIFDSL 193 >gi|260654938|ref|ZP_05860426.1| ribosome biogenesis GTP-binding protein YsxC [Jonquetella anthropi E3_33 E1] gi|260630253|gb|EEX48447.1| ribosome biogenesis GTP-binding protein YsxC [Jonquetella anthropi E3_33 E1] Length = 204 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P A PEIAF GRSNVGKS+L+N L+ +K LA S+ PG+T+ +NF+ + Sbjct: 15 EQIPPAEGPEIAFVGRSNVGKSTLLNGLMGQK-LAHVSSKPGKTRSINFYSVE------- 66 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PG+GYA + +SW LI +LS R LR + L+D RHG+ D D Sbjct: 67 AGRKFTLVDLPGFGYAALSRSERESWNRLIGDFLSTRGALRLIVHLVDIRHGLLAKDVDF 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + +V TK DK+S + + + + + + S+ + K IE Sbjct: 127 QEWSRNLETPVFVVFTKADKISSGKRSGLVRQY---VSAGLRSWDKPLVCSNQEPKTIEA 183 Query: 202 LRKAILETIN 211 LR I ++ Sbjct: 184 LRNFIETFLD 193 >gi|71892385|ref|YP_278119.1| GTP-binding protein [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|119368792|sp|Q491W2|ENGB_BLOPB RecName: Full=Probable GTP-binding protein EngB gi|71796491|gb|AAZ41242.1| Probable GTP-binding protein [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 199 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 FL VP + LP E+AF G SN GKSS IN L +K L + S PG TQ +N F Sbjct: 10 FLISVPAVYCLPNEKIGMEVAFVGYSNSGKSSAINALTYQKKLTKVSKTPGCTQLINLFE 69 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 P + L+D PGYGYA+ KK + W +I YL +R L+ + L++D RH Sbjct: 70 VS---------PGIRLIDFPGYGYAKKTKKRKNYWHDVICEYLKKRKNLKGLILMMDIRH 120 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +K +DQ V +L+K DK+S Q T +K + ++ H +V P S Sbjct: 121 PIKDLDQKTIESALSVDVPVFTLLSKSDKISRNILQVTSKKIIHDMKMMFETHIQVEPFS 180 Query: 193 SVKRKGIEVLRKAILETI 210 VK+ GI L++ + + Sbjct: 181 VVKKYGIHSLKRVLNNWL 198 >gi|303235063|ref|ZP_07321687.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna BVS033A4] gi|302493918|gb|EFL53700.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna BVS033A4] Length = 201 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 11/191 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P PEIAF GRSNVGKSS IN +++RKNLAR S+ PG+T+ +NF+ N Sbjct: 16 EQYPDESLPEIAFCGRSNVGKSSFINSILDRKNLARISSKPGKTRTVNFY---------N 66 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD+PGYGYA+ K W +I YL+ R L V+L++D RH D+++ Sbjct: 67 ANNEFRLVDLPGYGYAQTSKSEKKKWAQVIETYLNNRRNLYEVFLIVDIRHKPTVQDKEM 126 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++++ + ++ TK+DK+ T ++ L K + + SS + + Sbjct: 127 YNWIIQSGFCGFVIATKLDKIGKTMIKKNLNIIKKELNIDDDNL--IYEYSSTSKTNKKA 184 Query: 202 LRKAILETINY 212 + + + + Y Sbjct: 185 VMEQLEMILKY 195 >gi|224419264|ref|ZP_03657270.1| GTPase EngB [Helicobacter canadensis MIT 98-5491] gi|253826978|ref|ZP_04869863.1| GTP-binding protein [Helicobacter canadensis MIT 98-5491] gi|313142766|ref|ZP_07804959.1| GTP-binding protein [Helicobacter canadensis MIT 98-5491] gi|253510384|gb|EES89043.1| GTP-binding protein [Helicobacter canadensis MIT 98-5491] gi|313131797|gb|EFR49414.1| GTP-binding protein [Helicobacter canadensis MIT 98-5491] Length = 209 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 14/206 (6%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 +T S F + P EIAF GRSNVGKS+ IN+L +KNLA++S PG+TQ Sbjct: 3 YTLSKASFFTSAQNLSQCPPPLLSEIAFLGRSNVGKSTFINLLCKQKNLAKSSQTPGKTQ 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +NFF+ N + + LVD+PG+GYA+ K + W ++ +L +R ++R Sbjct: 63 LINFFLTHWKQKDSNEILQIYLVDLPGFGYAKVSKSQKELWNKNLIEFLKKRDSIRLFVH 122 Query: 127 LIDCRHGVKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 L D RH +ID ++ FL +K + TK DKL+ T N Sbjct: 123 LRDSRHPYLEIDSNLIEFLTPFLRKDQKILQIFTKFDKLNSTQK-----------TNLKK 171 Query: 184 AHPEVIPTSSVKRKGIEVLRKAILET 209 P + +SS+++ ++ + IL Sbjct: 172 EFPNALFSSSLQKNNLQEISDFILNH 197 >gi|15617031|ref|NP_240244.1| GTPase EngB [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681783|ref|YP_002468169.1| hypothetical GTP-binding protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682338|ref|YP_002468722.1| hypothetical GTP-binding protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471485|ref|ZP_05635484.1| ribosome biogenesis GTP-binding protein YsxC [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|12644609|sp|P57507|ENGB_BUCAI RecName: Full=Probable GTP-binding protein EngB gi|254783188|sp|B8D9L0|ENGB_BUCA5 RecName: Full=Probable GTP-binding protein EngB gi|254783189|sp|B8D7W2|ENGB_BUCAT RecName: Full=Probable GTP-binding protein EngB gi|25306610|pir||B84980 hypothetical GTP-binding protein [imported] - Buchnera sp. (strain APS) gi|10039096|dbj|BAB13130.1| hypothetical GTP-binding protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219622071|gb|ACL30227.1| hypothetical GTP-binding protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624626|gb|ACL30781.1| hypothetical GTP-binding protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086163|gb|ADP66245.1| ribosome biogenesis GTP-binding protein YsxC [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086735|gb|ADP66816.1| ribosome biogenesis GTP-binding protein YsxC [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087323|gb|ADP67403.1| ribosome biogenesis GTP-binding protein YsxC [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 205 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 68/193 (35%), Positives = 102/193 (52%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ +I + EIAF G SN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 11 FLKSYSKITDIDIQNGIEIAFIGYSNTGKSSAINALTNQKKLARFSKTPGRTQLINFFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGY++AP W + YL +R ++ LL+D R+ Sbjct: 71 ---------VSGFRIVDLPGYGYSQAPLLVRSKWQKKVYDYLEKREQIKLFVLLMDIRYP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++DQ + S +K +S ++LTK DK+ + + + + E+I SS Sbjct: 122 LKKLDQKIISIAVQKKISILVLLTKCDKIKINHQKNQADMVFKKLNVLLDSF-EIILFSS 180 Query: 194 VKRKGIEVLRKAI 206 K+ GIE L+ ++ Sbjct: 181 YKKIGIEKLKLSL 193 >gi|254458024|ref|ZP_05071451.1| hypothetical protein CBGD1_2269 [Campylobacterales bacterium GD 1] gi|207085417|gb|EDZ62702.1| hypothetical protein CBGD1_2269 [Campylobacterales bacterium GD 1] Length = 210 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 15/205 (7%) Query: 11 AWIFLRGVPEIGLLPKAG-PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ I P+ E+ F RSNVGKSSL+N L N K LA+ S+ PG+T+ +N Sbjct: 6 EAKFVTSAANISGAPETDEQNEVVFMARSNVGKSSLLNALTNHKGLAKVSSTPGKTRLIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F + VD+PG+GYA+ K W + Y+S+R ++ LID Sbjct: 66 YFDVTFIDRENSQKSIAKFVDLPGFGYAKVSKSMKYDWERNLTDYISQREQIKLFIHLID 125 Query: 130 CRHGVKQIDQDVFSFLDKK---AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 CRH +ID V FL + TK+DKL+ T P Sbjct: 126 CRHPDLEIDTSVSEFLFDNCRENQYILQIFTKVDKLNQKEQNA-----------LRTKFP 174 Query: 187 EVIPTSSVKRKGIEVLRKAILETIN 211 + SS K++G++ + I + ++ Sbjct: 175 NAMMVSSSKKRGMQKAIQVIYDILH 199 >gi|330723278|gb|AEC45648.1| GTPase EngB [Mycoplasma hyorhinis MCLD] Length = 184 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 17/199 (8%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F++ + + EI GRSNVGKSSLIN L N+K +A+TS PGRTQ +NFF Sbjct: 2 WTFIKSAADKFSWFEHLAQEICLIGRSNVGKSSLINALANQK-IAKTSKQPGRTQLINFF 60 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N +VD+PGYG+A+ ++ Y R+ L+ ++LID Sbjct: 61 ---------YNQQKQVIVDLPGYGFAKISISQKSLISSMLEEYFKSRTNLKITFILIDSN 111 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G+ +D + FL + + I+ TKIDK++ + + + + L + E Sbjct: 112 VGITSLDLQMLDFLKQLKRNVVIIATKIDKINQSQKYKITKAIQEL-------NYECFLV 164 Query: 192 SSVKRKGIEVLRKAILETI 210 SS K+ GI + I + + Sbjct: 165 SSAKKIGISQINNFINQQL 183 >gi|308808330|ref|XP_003081475.1| Predicted GTPase (ISS) [Ostreococcus tauri] gi|116059938|emb|CAL55997.1| Predicted GTPase (ISS) [Ostreococcus tauri] Length = 396 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 82/184 (44%), Gaps = 11/184 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+A GRSNVGKSSL+N++ A S PG T +N + LVD Sbjct: 126 EVALIGRSNVGKSSLLNLVTFGAGAAVVSAKPGTTCSMNHYSVD---------GRWRLVD 176 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 +PGYGYA A +++W Y + R L V LLID D+ ++L + Sbjct: 177 LPGYGYAEAEPGEIEAWDAFTKEYFATRENLAGVLLLIDASVPPTANDEKYANWLIENET 236 Query: 151 SYQIVLTKI--DKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + IV TK DK + ++ + + P +I TSSV +G + + K I Sbjct: 237 PFTIVFTKCDRDKPKGPSVEDNKAAFRAKLEERWHRLPSMISTSSVTTQGRDEVLKFISS 296 Query: 209 TINY 212 I Y Sbjct: 297 LIVY 300 >gi|58584614|ref|YP_198187.1| GTPase EngB [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418930|gb|AAW70945.1| Predicted GTPase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 186 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 8/172 (4%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 G +I LP PEIAF+GRSNVGKSSLIN+L+N K AR S+ PG T+ +NF+ + Sbjct: 3 GASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYN- 61 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYG + A K + GL+ YL R LR V++LID + +K+ Sbjct: 62 -------DKFRLVDLPGYGCSHASKDETIQYLGLVEYYLIHRRNLRRVFVLIDSKVRLKE 114 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 ID+D +L +++ +VLTKIDK+ +E T+ I N + ++ Sbjct: 115 IDKDFIYWLTYNNINFDVVLTKIDKVDRENLDAIIESTRKWINNESVSIRQI 166 >gi|302819613|ref|XP_002991476.1| hypothetical protein SELMODRAFT_133692 [Selaginella moellendorffii] gi|300140678|gb|EFJ07398.1| hypothetical protein SELMODRAFT_133692 [Selaginella moellendorffii] Length = 244 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 94/211 (44%), Gaps = 27/211 (12%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ I P G PE+AF GRSNVGKSSL+N+L+ RK+LA S PG+TQ +N F+ Sbjct: 46 FIKSSDGIKDCPMDGFPEVAFVGRSNVGKSSLVNLLMERKSLALVSKKPGKTQLINHFLV 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYG+A APK W Y +R TL V LID Sbjct: 106 NKR---------WYLVDLPGYGFASAPKTLCVKWNEFTKDYFLKRKTLVMVVQLIDSSIP 156 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT------------AQETLEKTKYLIRNY 181 V+QID D ++L + + + +E + + Sbjct: 157 VQQIDIDCATWLKQHNIPSTLAF-----TKCDRKKKKRKTGGKHPVDNVVEFLQEMRLVT 211 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 +P I TS V +G + L I E NY Sbjct: 212 TQTYP-WILTSCVTGQGRDELMMHIEEFRNY 241 >gi|222528931|ref|YP_002572813.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor bescii DSM 6725] gi|222455778|gb|ACM60040.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725] Length = 204 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 94/194 (48%), Gaps = 15/194 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PE+ GRSNVGKSS IN + + LA+ + PG+T+ +NFF Sbjct: 14 AVKKEDYPPIKMPEMCICGRSNVGKSSFINAVF-KDKLAKVGSTPGKTRTINFF------ 66 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD+PGYGYA K+ W +I YL ER L+ LL+D RH + Sbjct: 67 ---NIDNKFRVVDLPGYGYAEVSKEEKRRWRTMIEEYLLERQELKLSVLLLDSRHLPTED 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP-TSSVKR 196 D+ + F DKK + IVLTK DKLS + E LI E+ S+ Sbjct: 124 DKIMLGFFDKKEIPIMIVLTKCDKLSNNELAKNTE----LISKELGIEKELFYHFSAKSG 179 Query: 197 KGIEVLRKAILETI 210 G++ ++ AI + + Sbjct: 180 MGVKQVQFAITKFM 193 >gi|302794304|ref|XP_002978916.1| hypothetical protein SELMODRAFT_110012 [Selaginella moellendorffii] gi|300153234|gb|EFJ19873.1| hypothetical protein SELMODRAFT_110012 [Selaginella moellendorffii] Length = 244 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 95/210 (45%), Gaps = 25/210 (11%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ I P G PE+AF GRSNVGKSSL+N+L+ RK+LA S PG+TQ +N F+ Sbjct: 46 FIKSSDGIKDCPMDGFPEVAFVGRSNVGKSSLVNLLMERKSLALVSKKPGKTQLINHFLV 105 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD+PGYG+A APK W Y +R TL V LID Sbjct: 106 NKR---------WYLVDLPGYGFASAPKTLCVKWNEFTKDYFLKRKTLVMVVQLIDSSIP 156 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ-----------ETLEKTKYLIRNYP 182 V+QID D ++L + + + + + + + +R Sbjct: 157 VQQIDIDCATWLKQHNIPSTLAF-----TKCDRKKKKRKTGGKHPVDNVVEFLQQMRLVT 211 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETINY 212 T I TS V +G + L I E NY Sbjct: 212 TQTYPWILTSCVTGQGRDELMMHIEEFRNY 241 >gi|299471340|emb|CBN79295.1| YihA2, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 247 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 104/188 (55%), Gaps = 5/188 (2%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP A PE+AF GRSN GKS+L+ L+ L R S +PG T+ +N+F ++ Sbjct: 58 HELPTADTPEVAFIGRSNQGKSTLVGKLLKNPKLVRASKSPGCTKTVNYFALREGG---A 114 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLIDCRHGVKQIDQ 139 P LVD+PGYG+AR K+ V W + YL RS+ LR ++L+D RHG++ D+ Sbjct: 115 ESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDE 174 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + SFL + V +VLTK+DK SP ++LE L ++P P V S+ K +G+ Sbjct: 175 QMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGM 234 Query: 200 EVLRKAIL 207 + + Sbjct: 235 GEFQNTLY 242 >gi|320167719|gb|EFW44618.1| GTPase EngB [Capsaspora owczarzaki ATCC 30864] Length = 617 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 105/211 (49%), Gaps = 16/211 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIG-LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 ++ +F + I + +IG P PE A GRSNVGKSSLIN LV+ L RTS Sbjct: 239 FANRLFQLPSQI-VTSTSDIGLHSPPEKYPEFAVIGRSNVGKSSLINALVHSTTLVRTSA 297 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG T+ LNFF + +VD PGYGY + W + LS RST Sbjct: 298 TPGHTKTLNFFSIG---------RRIGVVDCPGYGYRA-----QEEWMDNLGTMLSTRST 343 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 +R V LLID HG+K D +V L++ +QIV TK D++ + T+ + R Sbjct: 344 IRQVLLLIDPMHGLKTTDLEVMQLLEELEKPFQIVFTKSDRMDGKLDMAVMRATEIIARQ 403 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 P P S ++ KG+ VLR +IL ++ Sbjct: 404 TTHCMPFPFPVSVLQNKGLGVLRHSILRALD 434 >gi|189485033|ref|YP_001955974.1| putative GTP-binding protein EngB [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170286992|dbj|BAG13513.1| putative GTP-binding protein EngB [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 193 Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 108/199 (54%), Gaps = 12/199 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +F R E LPK+ EI FSGRSNVGKSS+IN L ++KNLAR S PGRT+ +N + Sbjct: 6 VFFRATAEADSLPKS-VAEIIFSGRSNVGKSSVINALCSQKNLARISKTPGRTRSINVYS 64 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +VD+PGYG+AR + W ++ + +R++ + VY++ID Sbjct: 65 VSLRK---------WIVDLPGYGFARVSLQEKKLWNKMMEECIIKRNSNKTVYIVIDAFV 115 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 G ++D D+ +L + +S++I+ K DK+ T +++ ++ + T P V S Sbjct: 116 GPTELDFDMTKWLKEYNISFKIIANKCDKVPQTISEDEIQS--KAAECFGTDKPNVFTVS 173 Query: 193 SVKRKGIEVLRKAILETIN 211 + KR G L+ IL+ N Sbjct: 174 AKKRNGFNKLKTDILKFFN 192 >gi|320528421|ref|ZP_08029583.1| ribosome biogenesis GTP-binding protein YsxC [Solobacterium moorei F0204] gi|320131335|gb|EFW23903.1| ribosome biogenesis GTP-binding protein YsxC [Solobacterium moorei F0204] Length = 194 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 12/196 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L+ P + PEI F GRSN GKS+LIN LVNRKNLA + PG+T+ LNFF Sbjct: 9 LKTAALETQWPVSDLPEIIFVGRSNAGKSTLINGLVNRKNLAYSGKTPGKTRLLNFFSVD 68 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + D PGYGYA + +++ ++ LI Y ++R L+ + +++D R Sbjct: 69 N---------KVVFTDAPGYGYATSDRQSALAFAKLIDPYFAKRDQLKAMIIVLDARRVP 119 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D + + + ++ V TKIDKLS + + L+K + A +IP ++ Sbjct: 120 SNDDIQMVEYGKESHLAIFAVCTKIDKLSRSQMLQNLKKISMTLGIQENA---LIPVNAE 176 Query: 195 KRKGIEVLRKAILETI 210 K++G+EV+ + I + I Sbjct: 177 KKQGLEVVWEKIDQLI 192 >gi|222823665|ref|YP_002575239.1| predicted ATP/GTP-binding protein [Campylobacter lari RM2100] gi|254783190|sp|B9KG03|ENGB_CAMLR RecName: Full=Probable GTP-binding protein EngB gi|222538887|gb|ACM63988.1| conserved hypothetical protein, predicted ATP/GTP-binding protein [Campylobacter lari RM2100] Length = 199 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 104/206 (50%), Gaps = 17/206 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 FL +I P+ EIAF GRSNVGKSSLIN L KNLA++S+ PG+TQ +NF Sbjct: 4 NAKFLISASKIDEAPQPIYTEIAFLGRSNVGKSSLINTLCKNKNLAKSSSTPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + + + +D+PG+GYA+ KK W + +L ERS+++ LID Sbjct: 64 FEVDCKKD--EDKFKLIFIDLPGFGYAKVSKKTKAIWNKNLDEFLKERSSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH ID ++ + V TK DKL+ + + L K Sbjct: 122 RHENLDIDLNLDLYLDSFIRADQKKITVFTKADKLNQSQKAKLLNANKNA---------- 171 Query: 188 VIPTSSVKRKGIEVL-RKAILETINY 212 I S++K+ GI+ L +K ILE++ + Sbjct: 172 -ILVSNLKKSGIDKLEQKIILESLGF 196 >gi|282890348|ref|ZP_06298876.1| hypothetical protein pah_c016o061 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499730|gb|EFB42021.1| hypothetical protein pah_c016o061 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 205 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 18/203 (8%) Query: 14 FLRGVPEIGLLPKAG------PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 F+ P PEIA +GRSNVGKSSL+N L KNL +TS+ PG+TQ Sbjct: 10 FITTAVNQKNYPSVKDTAGLVLPEIAVAGRSNVGKSSLLNHLFQVKNLVKTSSTPGKTQA 69 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LNFF + + VD+PGYG+A+ P + WG LI YL ER L+ + L Sbjct: 70 LNFFNVDE---------KLVFVDLPGYGFAQVPLEVRKKWGPLIEHYLRERENLKLILFL 120 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 D R + D+ ++ K S +VLTK+DK++ +T+ ++ + + Sbjct: 121 FDIRRLPNEDDKLFLDWVIKNQKSMILVLTKVDKVTANQKA---SQTRAILSAFEAENIH 177 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 S K G + L + E + Sbjct: 178 YAYYSVPKNLGRKELIAMMNEAL 200 >gi|311087831|gb|ADP67910.1| ribosome biogenesis GTP-binding protein YsxC [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 205 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 10/193 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ +I + EIAF G SN GKSS IN L N+K LAR S PGRTQ +NFF Sbjct: 11 FLKSYSKITDIDIQNGIEIAFIGYSNTGKSSAINALTNQKKLARFSKTPGRTQLINFFEV 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGY++AP W + YL +R ++ LL+D R+ Sbjct: 71 ---------VSGFRIVDLPGYGYSQAPLLVRSKWQKKVYDYLEKREQIKLFVLLMDIRYP 121 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +K++DQ + S +K +S ++LTK DK+ + + + + ++I SS Sbjct: 122 LKKLDQKIISIAVQKKISILVLLTKCDKIKINHQKNQADMVFKKLNVLLDSF-KIILFSS 180 Query: 194 VKRKGIEVLRKAI 206 K+ GIE L+ ++ Sbjct: 181 YKKIGIEKLKLSL 193 >gi|242032515|ref|XP_002463652.1| hypothetical protein SORBIDRAFT_01g003620 [Sorghum bicolor] gi|241917506|gb|EER90650.1| hypothetical protein SORBIDRAFT_01g003620 [Sorghum bicolor] Length = 550 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + + F ++ F P PEIAF+G SNVGKSSL+N L + + RTS+ Sbjct: 347 IEESEF-RNKLEFFAAAKISSSFPAPTLPEIAFAGVSNVGKSSLLNSLTRQWGVVRTSDK 405 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF + LVD+PGYG+A A + +SW L+ Y+S R L Sbjct: 406 PGLTQTINFFRLA---------SKLCLVDLPGYGFAYAKDEVKESWEELVKEYVSTRVGL 456 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V LL+ + G+K +D ++ +++ YQIVLTK D + P + + ++ Sbjct: 457 ERVCLLVHTKRGMKPLDYELVDLMERHKTPYQIVLTKTDLVFPIDVARRAMEIQESLKRN 516 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 + V+ SS GI LR + Sbjct: 517 KSVVNPVMMVSSKTGAGIRNLRGVL 541 >gi|68163469|ref|NP_001020186.1| GTP-binding protein 8 [Rattus norvegicus] gi|81882579|sp|Q5BK22|GTPB8_RAT RecName: Full=GTP-binding protein 8 gi|60688430|gb|AAH91236.1| GTP-binding protein 8 (putative) [Rattus norvegicus] gi|149060437|gb|EDM11151.1| GTP-binding protein 8 (putative), isoform CRA_a [Rattus norvegicus] Length = 285 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 20/212 (9%) Query: 3 SHTIF---TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + ++F ++ +L + P PE+ F GRSNVGKSSLI L + R Sbjct: 82 AESVFAATVRNRIEYLSSAVRLDHAPSLRQPEVCFIGRSNVGKSSLIKALFSMAPDVEVR 141 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF LVDMPGYGY RAP+ VD ++ YL E Sbjct: 142 ISKKPGHTKKMNFFKVGKH---------FTLVDMPGYGY-RAPEDFVD----MVETYLKE 187 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKY 176 R+ L+ +LL+D G+ ++D ++ A+ Y ++LTKIDK S ++ L+ ++ Sbjct: 188 RNNLKRTFLLVDSVVGITKLDNIAIEMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQEF 247 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + P++ P S+V G+ +L+ I + Sbjct: 248 VNTQTQGCFPQLFPISAVTYSGVHLLKCFIAD 279 >gi|242309665|ref|ZP_04808820.1| GTP-binding protein [Helicobacter pullorum MIT 98-5489] gi|239523666|gb|EEQ63532.1| GTP-binding protein [Helicobacter pullorum MIT 98-5489] Length = 206 Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 14/197 (7%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 FT S F + P EIAF GRSNVGKS+ IN+L N+KNLA++S PG+ Sbjct: 2 IDFTLSKASFFVSAQNLSQCPPPLLSEIAFLGRSNVGKSTFINLLCNQKNLAKSSQTPGK 61 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +NFF+ + LVD+PG+GYA+ K W +V +L +R +R Sbjct: 62 TQLINFFITHWKQKSTQETSQIYLVDLPGFGYAKVSKTQKKLWDKNLVEFLQKRDNIRLF 121 Query: 125 YLLIDCRHGVKQIDQDVFSFLDK---KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 L+D RH Q D+++ F+ + K + TK DKL+ + + ++ Sbjct: 122 VHLVDSRHPHLQTDKNLIDFIHQFLRKDQRLLRIFTKFDKLNASEQTKLKKE-------- 173 Query: 182 PTAHPEVIPTSSVKRKG 198 P+ + +SS+++ Sbjct: 174 ---FPKALFSSSLQKSN 187 >gi|255020065|ref|ZP_05292137.1| GTP-binding protein EngB [Acidithiobacillus caldus ATCC 51756] gi|254970492|gb|EET27982.1| GTP-binding protein EngB [Acidithiobacillus caldus ATCC 51756] Length = 247 Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 68/196 (34%), Positives = 93/196 (47%), Gaps = 12/196 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V + LP E+A +GRSNVGKSS++N+L LAR S PGRTQ +N F Sbjct: 23 FSTSVTRMDQLPADDGAEVAIAGRSNVGKSSVLNLLTGHGGLARVSRTPGRTQAINVFDL 82 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 P L+D+PGYGYA+ P SWG L+ YL R++LR + L++D RH Sbjct: 83 D---------PGQRLMDLPGYGYAKVPDALRLSWGDLLEDYLRRRTSLRLLLLVMDIRHP 133 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D + F +L K DKLS A L + + RN + S+ Sbjct: 134 LGSHDLALLDFARHCGRPVHALLNKADKLSRGAALHALAQAR---RNPALEGVGLQCFST 190 Query: 194 VKRKGIEVLRKAILET 209 G+E L + T Sbjct: 191 QSGLGLEELHWLLART 206 >gi|46580074|ref|YP_010882.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio vulgaris str. Hildenborough] gi|81566751|sp|Q72BH2|ENGB_DESVH RecName: Full=Probable GTP-binding protein EngB gi|46449490|gb|AAS96141.1| GTP-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|311233927|gb|ADP86781.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio vulgaris RCH1] Length = 216 Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 13/197 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S + + L P+IA +GRSNVGKSSL+N L RK LA+TS+ PG+T+ +N Sbjct: 3 STLVLETTAYTLEQLIHLDAPQIALAGRSNVGKSSLVNALARRKQLAKTSSTPGKTRSVN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 ++ + +VD+PGYGYA+ K+ W LI +Y+ +LR + +L+D Sbjct: 63 YY--------RVEPEGFYIVDLPGYGYAQCSKEERKKWAKLIEKYIVSCKSLRGLAVLLD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 CR +++D D+ S+ + VLTK DK + ++ L+ + + Sbjct: 115 CRLDPQRLDVDLTSYARANNIPLLPVLTKGDKCKLRERSDRQKQWAVLLGGR-----KPL 169 Query: 190 PTSSVKRKGIEVLRKAI 206 T+S+ GI L + + Sbjct: 170 VTASMTGLGIADLWREL 186 >gi|120602468|ref|YP_966868.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio vulgaris DP4] gi|166225952|sp|A1VDC5|ENGB_DESVV RecName: Full=Probable GTP-binding protein EngB gi|120562697|gb|ABM28441.1| GTP-binding protein, HSR1-related protein [Desulfovibrio vulgaris DP4] Length = 216 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 13/197 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S + + L P+IA +GRSNVGKSSL+N L RK LA+TS+ PG+T+ +N Sbjct: 3 STLVLETTAYTLEQLIHLDAPQIALAGRSNVGKSSLVNALARRKQLAKTSSTPGKTRSVN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 ++ + +VD+PGYGYA+ K+ W LI +Y+ +LR + +L+D Sbjct: 63 YY--------RVEPEGFYIVDLPGYGYAQCSKEERKKWAKLIEKYIVSCKSLRGLAVLLD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 CR +++D D+ S+ + VLTK DK + ++ L+ + + Sbjct: 115 CRLDPQRLDVDLTSYARANNIPLLPVLTKGDKCKLRERSDRQKQWAVLLGGR-----KPL 169 Query: 190 PTSSVKRKGIEVLRKAI 206 T+S+ GI L + + Sbjct: 170 VTASMTGLGIADLWREL 186 >gi|315636942|ref|ZP_07892166.1| ribosome biogenesis GTP-binding protein YsxC [Arcobacter butzleri JV22] gi|315478772|gb|EFU69481.1| ribosome biogenesis GTP-binding protein YsxC [Arcobacter butzleri JV22] Length = 200 Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 105/201 (52%), Gaps = 15/201 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ + P E+AF GRSNVGKSS++N L +R LA++S+ PG+TQ +N+F Sbjct: 8 FLQSAQSVNDSPAPNVAEVAFLGRSNVGKSSILNSLTSRNGLAKSSSTPGKTQLINYFEI 67 Query: 74 KDFSNLKNNLPAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K + + A VD+PG+GYA+ K W + YL R L+ LID RH Sbjct: 68 KFKTKNEETPYLFARFVDLPGFGYAKVAKSLKAEWNKNLTGYLQLRPNLQIFVHLIDSRH 127 Query: 133 GVKQIDQDVFSFLDKKAVSYQIV---LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++V FL + QI+ TKIDKL+ + + L R+YP I Sbjct: 128 PDLEIDKNVDEFLKEIKRGDQIIVNAFTKIDKLNSSELSK-------LKRDYPDG----I 176 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S++K++GI L+ I + Sbjct: 177 FLSNLKKRGIIDLQDKITGYL 197 >gi|157737227|ref|YP_001489910.1| putative ATP /GTP binding protein [Arcobacter butzleri RM4018] gi|166920108|sp|A8ETG7|ENGB_ARCB4 RecName: Full=Probable GTP-binding protein EngB gi|157699081|gb|ABV67241.1| putative ATP /GTP binding protein [Arcobacter butzleri RM4018] Length = 200 Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 71/201 (35%), Positives = 105/201 (52%), Gaps = 15/201 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ + P E+AF GRSNVGKSS++N L +R LA++S+ PG+TQ +N+F Sbjct: 8 FLQSAQSVNDSPAPNVAEVAFLGRSNVGKSSILNSLTSRNGLAKSSSTPGKTQLINYFEI 67 Query: 74 KDFSNLKNNLPAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K + + A VD+PG+GYA+ K W + YL R L+ LID RH Sbjct: 68 KFKTKNEETPYLFARFVDLPGFGYAKVAKSLKAEWNKNLTGYLQLRPNLQIFVHLIDSRH 127 Query: 133 GVKQIDQDVFSFLDKKAVSYQIV---LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID++V FL + QI+ TKIDKL+ + + L R+YP I Sbjct: 128 PELEIDKNVDEFLKEIKRGDQIIVNAFTKIDKLNSSELSK-------LKRDYPDG----I 176 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S++K++GI L+ I + Sbjct: 177 FLSNLKKRGIIDLQDKITGYL 197 >gi|261749612|ref|YP_003257298.1| putative EngB GTP-binding protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497705|gb|ACX84155.1| putative EngB GTP-binding protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 206 Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 10/198 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + L + PE AF GRSNVGKSSLIN + NR+ LA+ S+ PGRT+ +N F+ Sbjct: 8 FEGSKIQSNQLFLSNFPEYAFIGRSNVGKSSLINWITNRRKLAKVSSTPGRTKFVNPFLI 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+D+PGYGY+ +K + L++ Y+ R L ++LLID R Sbjct: 68 NH---------KWYLIDLPGYGYSSICQKKKEKTQKLMMDYIFYRKNLVNLFLLIDSRIF 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +++ D L + + IV TK DK+ P + ++ K I + P+ S Sbjct: 119 LQKSDIHFIKKLKIFQIPFCIVFTKTDKIHPRFLNKNIDFCKKEIEKILFSMPKYFKVSI 178 Query: 194 VKRKGIEVLRKAILETIN 211 R G E + + I + IN Sbjct: 179 KNRSGREKIIQYI-QNIN 195 >gi|78777274|ref|YP_393589.1| GTPase EngB [Sulfurimonas denitrificans DSM 1251] gi|78497814|gb|ABB44354.1| GTP-binding [Sulfurimonas denitrificans DSM 1251] Length = 205 Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 15/201 (7%) Query: 14 FLRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ P + P + EI F RSNVGKSSL+N L N K LA+ S+ PG+T+ +N+F Sbjct: 9 FITSAPNLDGAPPSIEQNEIVFMARSNVGKSSLLNALTNHKGLAKVSSTPGKTRLINYFD 68 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + VD+PG+GYA+ K W + Y++ R ++ L+DCRH Sbjct: 69 VTFINREDSLKSFAKFVDLPGFGYAKVAKSIKYDWERNLTDYIASRKQIKIFIHLVDCRH 128 Query: 133 GVKQIDQDVFSFLDKKAVSYQ---IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 ID+ V FL + A Q + TKIDKL+ E P + Sbjct: 129 PFLDIDKSVSDFLLECANPTQHIFQIFTKIDKLNQKEQTE-----------LRRDFPNAL 177 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS K+KG+ + I + Sbjct: 178 MVSSSKKKGLAKIVTLIYNVL 198 >gi|293336000|ref|NP_001168813.1| hypothetical protein LOC100382617 [Zea mays] gi|223973173|gb|ACN30774.1| unknown [Zea mays] Length = 548 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 10/205 (4%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + + F ++ F P PEIAF+G SNVGKSSL+N L + + RTS+ Sbjct: 345 IEDSAF-RNKLEFFAAAKISSSFPTPTLPEIAFAGVSNVGKSSLLNSLTRQWGVVRTSDK 403 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF + LVD+PGYG+A A + +SW L+ Y+S R L Sbjct: 404 PGLTQTINFFQLA---------SKLCLVDLPGYGFAYAKDEVKESWEELVKEYVSTRVGL 454 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V LL+ + G+K +D ++ +++ YQIVLTK D + P + + ++ Sbjct: 455 ERVCLLVHTKRGMKPLDYELVDLMERHKTPYQIVLTKTDLVFPIDVARRAVEIQESLKRN 514 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAI 206 + V+ SS GI LR + Sbjct: 515 KSVVNPVMMVSSKTGAGIRNLRGVL 539 >gi|281203575|gb|EFA77772.1| hypothetical protein PPL_09270 [Polysphondylium pallidum PN500] Length = 410 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 113/225 (50%), Gaps = 29/225 (12%) Query: 7 FTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP---- 62 F + + P + P+IAF GRSNVGKSSL+N L+ +A S P Sbjct: 144 FFSHQSKLITMAIKSEDFPASPLPQIAFIGRSNVGKSSLLNTLLG-DQMAHVSKTPVTIN 202 Query: 63 ----GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS-- 116 G T+ +NF+ D + +VD+PGYGY++ K WG I YL Sbjct: 203 NYNYGCTKSINFYALWD---------KIMMVDLPGYGYSKVSKDKASVWGRSISEYLLTS 253 Query: 117 ---------ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA 167 E++ L+ ++LL+D R G+++ D +V LD+ V++Q++LTKIDK + T Sbjct: 254 HHCKLNLLFEKTRLKKLFLLVDSRVGLQKNDIEVMKLLDEHRVAFQVILTKIDKATTTGL 313 Query: 168 QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 + + K I N + P +I SS + KGI+ +R ILE N+ Sbjct: 314 KRFYNQVKEEIMNNVSCVPNIIQCSSKEMKGIQQIRSVILEVTNF 358 >gi|302380199|ref|ZP_07268671.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna ACS-171-V-Col3] gi|302311982|gb|EFK93991.1| ribosome biogenesis GTP-binding protein YsxC [Finegoldia magna ACS-171-V-Col3] Length = 201 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 11/192 (5%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 I P PEIAF GRSNVGKSS IN +++RKNLARTS+ PG+T+ +NF+ Sbjct: 15 IEQYPDESLPEIAFCGRSNVGKSSFINSILDRKNLARTSSKPGKTRTVNFY--------- 65 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 N LVD+PGYGYA+ K W +I YL+ R L V+L++D RH D++ Sbjct: 66 NANNEFRLVDLPGYGYAQTSKSEKKKWAQVIETYLNNRRNLYEVFLIVDIRHKPTVQDKE 125 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 +++++ + ++ TK+DK+ T ++ L K + + SS + + Sbjct: 126 MYNWIIQSGFCGFVIATKLDKIGKTMKKKNLNIIKKELNIDDDNL--IYEYSSTSKTNKK 183 Query: 201 VLRKAILETINY 212 + + + + Y Sbjct: 184 AVMEQLEMILKY 195 >gi|18424095|ref|NP_568876.1| GTP binding [Arabidopsis thaliana] gi|14334980|gb|AAK59667.1| putative GTP-binding protein CGPA [Arabidopsis thaliana] gi|17104637|gb|AAL34207.1| putative GTP-binding protein CGPA [Arabidopsis thaliana] gi|332009660|gb|AED97043.1| putative GTP-binding protein CGPA [Arabidopsis thaliana] Length = 446 Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats. Identities = 63/178 (35%), Positives = 99/178 (55%), Gaps = 10/178 (5%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + ++F ++ F P PEIAF+GRSNVGKSSL+N L + + RTS+ Sbjct: 262 IEESVF-RNKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDK 320 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF P + LVD+PGYG+A A + ++W L+ Y+S R++L Sbjct: 321 PGLTQTINFFGLG---------PKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSL 371 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + V LL+D + G+K DQ++ + +++ YQIVLTK D + P + + ++ Sbjct: 372 KRVCLLVDTKWGMKPRDQELINLMERSNTKYQIVLTKTDVVFPIDVARRAMQIEEKLK 429 >gi|302759126|ref|XP_002962986.1| hypothetical protein SELMODRAFT_77904 [Selaginella moellendorffii] gi|302824628|ref|XP_002993956.1| hypothetical protein SELMODRAFT_137934 [Selaginella moellendorffii] gi|300138228|gb|EFJ05003.1| hypothetical protein SELMODRAFT_137934 [Selaginella moellendorffii] gi|300169847|gb|EFJ36449.1| hypothetical protein SELMODRAFT_77904 [Selaginella moellendorffii] Length = 259 Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 14/209 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +IF ++ +F+ G + +P A PEIAF+GR+N GKS LIN L + ARTS Sbjct: 65 IHQSIF-RNKQVFVAGAKVLSSIPPAELPEIAFAGRTNSGKSKLINALTRQYGRARTSPK 123 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG+T +NF+V + + LVDMPGY + + + L + Y++ R L Sbjct: 124 PGKTDSINFYVLGE---------KLCLVDMPGYSFMYGKQDQIQDLRQLNMDYITVRDHL 174 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V LLID G++Q DQ+ FL+ YQIVLTK DK+ P + + + Sbjct: 175 KRVCLLIDAEWGIRQKDQEFIDFLESVNRKYQIVLTKTDKVLPLDLGRRVTQIEEARIFS 234 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + S+ GI R A+ + Sbjct: 235 FLS----MMVSAKSGAGIGKFRMALASLL 259 >gi|66827277|ref|XP_646993.1| hypothetical protein DDB_G0268824 [Dictyostelium discoideum AX4] gi|60475065|gb|EAL73001.1| hypothetical protein DDB_G0268824 [Dictyostelium discoideum AX4] Length = 432 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 117/211 (55%), Gaps = 11/211 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 + ++ F+K A + + + PK P++AF G+SNVGKS+L+N ++ R++LA S Sbjct: 204 LFANVFFSKEASLDTMAIKSVDF-PKKHFPQVAFLGKSNVGKSTLLNSVL-RRDLAYVSK 261 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 + G T+ +NF+ + + LVD+PGYG+A+ KK WG I +L Sbjct: 262 SAGCTKTINFYQIWE---------KLYLVDLPGYGFAKVSKKKSTVWGNAISEFLLTSPN 312 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L V+LLID R+ + + D + S LD+ VS+QIVLTKIDK +P+ + K I+ Sbjct: 313 LFKVFLLIDSRNKIHKNDIEAMSLLDQHKVSFQIVLTKIDKTTPSMLRSLYGSLKEEIQK 372 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 P +I TSSV KGI+ +R IL N Sbjct: 373 TTCCLPTIIQTSSVDSKGIDDIRTTILNVTN 403 >gi|238487330|ref|XP_002374903.1| GTP binding protein (EngB), putative [Aspergillus flavus NRRL3357] gi|317143661|ref|XP_001819608.2| GTP-binding protein (EngB) [Aspergillus oryzae RIB40] gi|220699782|gb|EED56121.1| GTP binding protein (EngB), putative [Aspergillus flavus NRRL3357] Length = 318 Score = 177 bits (450), Expect = 8e-43, Method: Composition-based stats. Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 36/232 (15%) Query: 8 TKSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ + I + + P + PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ Sbjct: 73 SRHSPIKIWSASKFRTTPMSSVEPEVAFLGRSNVGKSSLLNAIMG-KEICWTSSKPGRTR 131 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F K + L+DMPGYG A + WG I++YL R LR +L Sbjct: 132 EMNAFGIG---GTKGGESKIVLLDMPGYGKASRTE-----WGIEIMKYLQGRKQLRRAFL 183 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL--------SPTTAQETLEKTKYLI 178 LID HG+K+ D+D+ K A+ +Q++++K+DK+ + + + L+ Sbjct: 184 LIDSLHGLKKTDEDILMLFRKYAIPHQVIMSKVDKILAKKKSQVKSGASAAKVATLQTLL 243 Query: 179 RNY------------PTAHPEVIPTSSV------KRKGIEVLRKAILETINY 212 ++Y P A E++ S+ K GI +R AIL + Sbjct: 244 QSYRPILQPDGRLEGPGALGEILTCSAETPISPGKSLGISAIRWAILSAAGF 295 >gi|255946970|ref|XP_002564252.1| Pc22g02080 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591269|emb|CAP97496.1| Pc22g02080 [Penicillium chrysogenum Wisconsin 54-1255] Length = 312 Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 39/236 (16%) Query: 2 VSHTIFT--KSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLART 58 + +FT + + + L + P A PE+AF GRSNVGKSSL+N ++ K + T Sbjct: 59 FADKVFTPSRHSPVKLWSAAKFRTTPFASVEPEVAFLGRSNVGKSSLLNAIMG-KEICWT 117 Query: 59 SNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 S+ PGRT+ +N F K + L+DMPGYG A + WG I++YL R Sbjct: 118 SSKPGRTREMNAFGIG---GTKGGESKVVLLDMPGYGKASRSE-----WGEEIMKYLQGR 169 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK--------LSPTTAQET 170 LR +LLID HG+KQ D ++ A+ +QI+L+K+DK + Sbjct: 170 KQLRRAFLLIDSTHGIKQTDAEILRLFRHHAIPHQIILSKVDKFLVRQFKQIKSGVTPAN 229 Query: 171 LEKTKYLI-------------RNYPTAHPEVIPTSSVKRK------GIEVLRKAIL 207 +E+ + L+ P + E++ S+ R GI+ +R +IL Sbjct: 230 IERLQLLLQGIKPIVQPDPGVAEGPGSLGEILTCSAEARIGPGRALGIDAVRWSIL 285 >gi|307721065|ref|YP_003892205.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurimonas autotrophica DSM 16294] gi|306979158|gb|ADN09193.1| ribosome biogenesis GTP-binding protein YsxC [Sulfurimonas autotrophica DSM 16294] Length = 205 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 15/201 (7%) Query: 14 FLRGVPEIGLLPKAG-PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ P + P++ E+ F RSNVGKSSL+N L N K LA+ S+ PG+T+ +N+F Sbjct: 9 FITSAPNVSAAPESEEQNEVVFMARSNVGKSSLLNALTNHKGLAKVSSTPGKTKLINYFD 68 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + VD+PG+GYA+ K W + Y+S R ++ LIDCRH Sbjct: 69 VTFLDRDSSEKIVAKFVDLPGFGYAKVAKSIKHDWEKNLTDYISNREEIKIFIHLIDCRH 128 Query: 133 GVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID V FL + A + TKIDKL+ ++ P + Sbjct: 129 PHLEIDTSVSDFLFRTARENQYILQIFTKIDKLNQKEQNALRKE-----------FPNAL 177 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS K++GI + K + + + Sbjct: 178 MVSSAKKRGISKIVKVVYDML 198 >gi|157364593|ref|YP_001471360.1| small GTP-binding protein [Thermotoga lettingae TMO] gi|157315197|gb|ABV34296.1| small GTP-binding protein [Thermotoga lettingae TMO] Length = 168 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 64/181 (35%), Positives = 99/181 (54%), Gaps = 18/181 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F GRSNVGKS+L+N+L N+K +AR S PG+T+ +NF+ VD Sbjct: 4 EICFVGRSNVGKSTLLNVLFNKK-IARASKRPGKTRSINFYEVN---------RKYYFVD 53 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 +PGYGYA A KK W +I +Y R+ ++ LLIDCR +++ D+ + + Sbjct: 54 LPGYGYAEASKKERQRWALIIEKYFENRAHQIKLSILLIDCRLFLQESDKMFLEWSEYFQ 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V IVL+K+DKL+ + + R + + EVIP S++ +KGI+ + + I Sbjct: 114 VPVTIVLSKVDKLNQSELCRKV-------REFEKQNLEVIPYSAITKKGIDRIIEKITSA 166 Query: 210 I 210 + Sbjct: 167 L 167 >gi|299115211|emb|CBN74042.1| YihA6, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 462 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 12/200 (6%) Query: 14 FLRGVPEIGLL-PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ + + P+ PEIAF GRSNVGKSS++N L +A+ S PGRT+ +N F Sbjct: 266 FVGSYDDKEEIWPRTNLPEIAFLGRSNVGKSSMLNTLFGEP-VAKVSKTPGRTRKINIFK 324 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 K+ N+ D+PGYGYA+ K + + YL RS L+ + LL D R Sbjct: 325 AKN----GNDKDVCYFADLPGYGYAKMSKDKQRTIEKFLGMYLERRSNLKLLILLADSRR 380 Query: 133 GVKQIDQDVFSFLDKKA---VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 D V + + K +V TK+DKL+ + +++ + P + Sbjct: 381 EPLASDAGVLEYAEDKEDRLYKILLVATKVDKLNTMESVVNIKRLQEAFELPPGL---PV 437 Query: 190 PTSSVKRKGIEVLRKAILET 209 S++ +G + + I + Sbjct: 438 SFSAITGQGKKEIWSYIRQA 457 >gi|301622385|ref|XP_002940516.1| PREDICTED: GTP-binding protein 8-like [Xenopus (Silurana) tropicalis] Length = 282 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 20/211 (9%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + +F K ++ + P PE+ F GRSNVGKSSLI L + R Sbjct: 78 AEELFRPSDKHQIDYVTSAIRMDHAPGLTQPEVCFIGRSNVGKSSLIKALFSLVPGIEVR 137 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ +NFF A LVDMPGYGY +AP + + ++ YL Sbjct: 138 VSKTPGHTKKMNFFKVG---------RAFTLVDMPGYGY-KAP----EDFADMVEPYLQV 183 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKY 176 R+ L+ +LL+D G ++ D ++ + Y IV TKID+ + LE ++ Sbjct: 184 RNNLKRTFLLVDSSIGFQKADLVAVEMCEEFGIPYVIVATKIDRPPTGVLLTQYLEIQEF 243 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + +P+ SSV+ GI +LR I Sbjct: 244 IEKQTQGCYPQPFLVSSVQFSGIHLLRCFIA 274 >gi|150021370|ref|YP_001306724.1| ribosome biogenesis GTP-binding protein YsxC [Thermosipho melanesiensis BI429] gi|149793891|gb|ABR31339.1| small GTP-binding protein [Thermosipho melanesiensis BI429] Length = 191 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 15/191 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P E F GRSNVGKS+L+N L N+A+ S PG+T +NF+ + Sbjct: 8 YSKKDKFPVPLNGEFVFVGRSNVGKSTLLNTLTGT-NIAKISKKPGKTASVNFYKINNL- 65 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQ 136 VD+PGYG+A+ +K W +I Y R ++ V+LLID RH +++ Sbjct: 66 --------FYFVDLPGYGFAKVSEKERIRWKQIIEMYFESRFWNIKIVFLLIDGRHELQK 117 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + ++L + + I+LTKIDKL + + + K L + +IP S++ + Sbjct: 118 NDEQMINWLKDLDLQFSIILTKIDKLKMSEKSKMISYYKRLF----GENYIIIPYSAITK 173 Query: 197 KGIEVLRKAIL 207 +G+ + + Sbjct: 174 EGVNEILNLVE 184 >gi|220904473|ref|YP_002479785.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254783193|sp|B8J030|ENGB_DESDA RecName: Full=Probable GTP-binding protein EngB gi|219868772|gb|ACL49107.1| GTP-binding protein HSR1-related [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 201 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 101/191 (52%), Gaps = 14/191 (7%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + L +IA +GRSNVGKSSL+N L RK LA+ S+ PG+T+ +NF++ Sbjct: 10 TAYTLDQLTAHPEAQIALAGRSNVGKSSLVNALAGRKKLAKVSSTPGKTRSVNFYLV--- 66 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVD+PGYGYARA + W L+ RYL+E ++L+ + LL+DCR +Q Sbjct: 67 -----EPLRFYLVDLPGYGYARASHSEREKWAKLLERYLTECASLKALALLLDCRLPPQQ 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 +D ++ SF + +LTK DK + ++ + ++ P + TSS R Sbjct: 122 LDLNLASFAQAHGLPLVPILTKADKCNQRERAAKQKEWQNIVGVSP------VLTSSSSR 175 Query: 197 KGIEVLRKAIL 207 GI+ L + + Sbjct: 176 LGIDRLWQELA 186 >gi|46445869|ref|YP_007234.1| hypothetical protein pc0235 [Candidatus Protochlamydia amoebophila UWE25] gi|81627683|sp|Q6MEP0|ENGB_PARUW RecName: Full=Probable GTP-binding protein EngB gi|46399510|emb|CAF22959.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 206 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 98/210 (46%), Gaps = 13/210 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 F K+A I + P I PE+A GRSNVGKSSL+N L K+L +TS Sbjct: 4 AVQAKFIKTA-ILNKDYPIIRSPSGDILPEVAVVGRSNVGKSSLLNHLFEAKHLVKTSAT 62 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG+TQ LNFF D +A D+PGYGYA+ P WG ++ YL R +L Sbjct: 63 PGKTQALNFFSLND---------QIAFADLPGYGYAKVPPSVRKEWGPMVRSYLESRESL 113 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + + L+D R + D ++ + +VLTKIDK++ + K + Sbjct: 114 KLILFLLDIRRIPNEEDIQFLEWVLYHEKALILVLTKIDKVNQKELRLNTTKILDTLSLM 173 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 H + S K +G + L I + +N Sbjct: 174 NLHH---LYYSVPKNRGRKELMIMIQDALN 200 >gi|303326799|ref|ZP_07357241.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio sp. 3_1_syn3] gi|302862787|gb|EFL85719.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio sp. 3_1_syn3] Length = 211 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 101/192 (52%), Gaps = 14/192 (7%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + L +IA +GRSNVGKSSLIN L RK LA+ S PG+T+ +NF+ + Sbjct: 9 TTAYTLDQLLALPEAQIALAGRSNVGKSSLINALAGRKKLAKVSATPGKTRSVNFYRVEP 68 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 ++ LVD+PGYGYARA + W L+ YL++ TL+ + LL+DCR + Sbjct: 69 YN--------FYLVDLPGYGYARASHEERRKWAKLLEHYLADCKTLKALALLLDCRLPPQ 120 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 ++D ++ SF + VLTK DK S ++ + L+ P + TSS Sbjct: 121 KLDLELASFARGCCLPLLPVLTKADKCSQRERAARQKEWQELLNVKP------VLTSSSS 174 Query: 196 RKGIEVLRKAIL 207 R G+E +A++ Sbjct: 175 RLGMEEFWRALI 186 >gi|227872172|ref|ZP_03990540.1| GTPase [Oribacterium sinus F0268] gi|227841985|gb|EEJ52247.1| GTPase [Oribacterium sinus F0268] Length = 161 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 58/155 (37%), Positives = 86/155 (55%), Gaps = 10/155 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LPK G PE +GRSNVGKSS IN L+ RK+ ARTS+ PG+T+ +NF+ D Sbjct: 16 STLPKTGKPEFVLAGRSNVGKSSFINTLLQRKSFARTSSTPGKTRTINFYSVND------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + LVD+PGYGYA + W +I RYL + + V LL+DCR + D + Sbjct: 70 ---SFYLVDLPGYGYAATGPVEQEKWDRMIRRYLEQGEDIEEVVLLLDCRRIPSEKDLQM 126 Query: 142 FSFL-DKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 F ++ +++TK+DKL + Q+ ++ + Sbjct: 127 FQWICSATGYEPIVIITKMDKLKRSQQQQAVKDIR 161 >gi|156085860|ref|XP_001610339.1| GTP-binding protein [Babesia bovis T2Bo] gi|154797592|gb|EDO06771.1| GTP-binding protein, putative [Babesia bovis] Length = 260 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 34/228 (14%) Query: 3 SHTIFTKS---AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNL---- 55 + +F+K +++ I PK P++A GRSNVGKSS+IN L+ R+ + Sbjct: 28 AAELFSKKVSTNPVYV--ADTIDKAPKKKIPQVAIVGRSNVGKSSIINSLLYRQMIPHFA 85 Query: 56 ---------------ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP 100 A SN PGRT+H+ F ++LVD+PGYG+A+ Sbjct: 86 RNMLSNGQLLKNPKFAPVSNNPGRTRHMFTFDLG---------AELSLVDLPGYGFAKVN 136 Query: 101 KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 + W L+ +YL E ++L+ V LID R G + D ++S L++ V +Q+VLTK + Sbjct: 137 DNIRNEWSVLVNKYLEESTSLQRVLSLIDARRGPMERDLKLWSMLEELRVPFQVVLTKCE 196 Query: 161 KLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVLRKAIL 207 L P ++ ++ + T HP + TS++K+ GI LR +I Sbjct: 197 ALKPIELHMVCQRVAEMVLAHGETVHPYIHSTSALKQLGIHELRLSIA 244 >gi|313682551|ref|YP_004060289.1| ribosome biogenesis GTP-binding protein ysxc [Sulfuricurvum kujiense DSM 16994] gi|313155411|gb|ADR34089.1| ribosome biogenesis GTP-binding protein YsxC [Sulfuricurvum kujiense DSM 16994] Length = 203 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 15/201 (7%) Query: 14 FLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ P I L P+ E+AF RSN GKSSL+N L RK+LA+ S PG+T+ +N+F Sbjct: 9 FVTSAPNIRLTPENEYQNEVAFMARSNTGKSSLLNTLTKRKSLAKVSATPGKTRLINYFD 68 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 N + VD+PG+GYA+ K W + +++ER +R LIDCRH Sbjct: 69 VVFADRETNERLSAKFVDLPGFGYAKVAKSLKTDWESNLTGFIAERKQIRIFVHLIDCRH 128 Query: 133 GVKQIDQDVFSFLDKKAVSYQI---VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +ID+ V ++L + Q+ + TKIDKL+ E ++ P I Sbjct: 129 PDLEIDRSVDAYLHEICSPDQVIVTIFTKIDKLNQKELSELKKR-----------FPGAI 177 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ KR+G++ + + + + Sbjct: 178 MVSNTKRRGVDAIVEHLYRLL 198 >gi|146324516|ref|XP_751180.2| GTP binding protein (EngB) [Aspergillus fumigatus Af293] gi|129557285|gb|EAL89142.2| GTP binding protein (EngB), putative [Aspergillus fumigatus Af293] Length = 321 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 36/232 (15%) Query: 8 TKSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ + + L + P + PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ Sbjct: 74 SRHSPVKLWSASKFRTTPLSSLEPEVAFLGRSNVGKSSLLNAIMG-KEMCWTSSKPGRTR 132 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F K + L+DMPGYG + WG I++YL R LR ++ Sbjct: 133 EMNAFGIG---GTKGGESKIVLLDMPGYGKGSRTE-----WGIEILKYLQGRRQLRRAFI 184 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK--------LSPTTAQETLEKTKYLI 178 LID HG+K+ D+D+ K A+ +QI+L+K+DK + + + + L+ Sbjct: 185 LIDSLHGIKKTDEDILMLFRKYAIPHQIILSKVDKVLAKRKMQVKSGASVANVAALRSLL 244 Query: 179 RNY------------PTAHPEVIPTSSVKRK------GIEVLRKAILETINY 212 ++ P A E++ S+ GI +R AIL + Sbjct: 245 QDLRPIVQPDGRDEGPGALGEILTCSAETPTGPGQFLGISAIRWAILSAAGF 296 >gi|34558350|ref|NP_908165.1| ribosome biogenesis GTP-binding protein YsxC [Wolinella succinogenes DSM 1740] gi|81653310|sp|Q7M7V3|ENGB_WOLSU RecName: Full=Probable GTP-binding protein EngB gi|34484069|emb|CAE11065.1| PUTATIVE GTP BINDING PROTEIN [Wolinella succinogenes] Length = 200 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 16/200 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + P E+ F GRSNVGKS+LIN++V+ K LA++S+ PG+TQ +N+F Sbjct: 9 FLTSASALSQTPPPKNSEVVFIGRSNVGKSTLINLIVDSKGLAKSSSTPGKTQLINYFET 68 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PG+GYA+ K+ WG ++ +L ER +++ LID RH Sbjct: 69 --IWKRGEERIPLWLVDLPGFGYAKVSKEMRKDWGEKLIHFLQERRSIKLFVQLIDARHP 126 Query: 134 VKQIDQD---VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 ID + + + + V TK+DKL+ ++ ++ +P+ Sbjct: 127 DLAIDAEAWAMIGAIKRGDQKVIRVFTKMDKLNRNDQKKLQQR-----------YPDACF 175 Query: 191 TSSVKRKGIEVLRKAILETI 210 T+ + ++GI +R+ +L+ + Sbjct: 176 TAMLGKEGIASVRERVLKDV 195 >gi|298708864|emb|CBJ30822.1| YihA1, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 356 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 97/211 (45%), Gaps = 24/211 (11%) Query: 15 LRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKN----LARTSNAPGRTQHL 68 L + +P A PE+A GRSNVGKS+L+N LV K A S PG T+ L Sbjct: 124 LSSATTLEEIPPAAASLPEVALVGRSNVGKSTLLNALVGLKKHPDQRATVSKTPGETRTL 183 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLL 127 +FF K M + DMPGYG+A A ++ W GL++ YL R + L+ V LL Sbjct: 184 DFFQIG-----KGKRAKMIIADMPGYGFAYANEEQRQDWKGLMMAYLRGRGAPLKRVMLL 238 Query: 128 IDCRHGVKQIDQDVFSFL----------DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 +D RHG K+ D + L + QI+LTK D + + + Sbjct: 239 LDARHGFKKADIEFLGLLYDPKGPSPLGKYRPPKIQILLTKCDLVKRIDLARRVVFVRQQ 298 Query: 178 IRN--YPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + V+ S++K G+ L+K + Sbjct: 299 LEEVSRRQTNLSVMTLSALKGAGMVELQKEL 329 >gi|159130365|gb|EDP55478.1| GTP binding protein (EngB), putative [Aspergillus fumigatus A1163] Length = 321 Score = 174 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 36/232 (15%) Query: 8 TKSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ + + L + P + PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ Sbjct: 74 SRHSPVKLWSASKFRTTPLSSLEPEVAFLGRSNVGKSSLLNAIMG-KEMCWTSSKPGRTR 132 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F K + L+DMPGYG + WG I++YL R LR ++ Sbjct: 133 EMNAFGIG---GTKGGESKIVLLDMPGYGKGSRTE-----WGIEILKYLQGRRQLRRAFI 184 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK--------LSPTTAQETLEKTKYLI 178 LID HG+K+ D+D+ K A+ +QI+L+K+DK + + + + L+ Sbjct: 185 LIDSLHGIKKTDEDILMLFRKYAIPHQIILSKVDKVLAKRKKQVKSGASVANVAALRSLL 244 Query: 179 RNY------------PTAHPEVIPTSSVKRK------GIEVLRKAILETINY 212 ++ P A E++ S+ GI +R AIL + Sbjct: 245 QDLRPIVQPDGRDEGPGALGEILTCSAETPTGPGQFLGISAIRWAILSAAGF 296 >gi|239993764|ref|ZP_04714288.1| ribosome biogenesis GTP-binding protein YsxC [Alteromonas macleodii ATCC 27126] Length = 140 Score = 174 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 11/149 (7%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 + +TK+ F P+I L E+AF+GRSN GKSS +N L +KNLARTS PGR Sbjct: 2 SYYTKAK--FFTSAPDIRHLKNDTGIEVAFAGRSNAGKSSALNTLTRQKNLARTSKTPGR 59 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 TQ +N F ++ + LVD+PGYG+A+ P W + YL +R +L+ + Sbjct: 60 TQLINVFELEE---------DLRLVDLPGYGFAKVPVAMKKKWQASLGEYLQKRKSLKGL 110 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 +L+D RH K +DQD+ + + Sbjct: 111 VVLMDIRHPFKDLDQDLIHWAVASNIPVL 139 >gi|262340870|ref|YP_003283725.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272207|gb|ACY40115.1| GTP-binding protein [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 208 Score = 174 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 10/198 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +G + + PE AF GRSNVGKSSLIN + RK +A+ S+ PGRTQ++N F+ Sbjct: 8 FKGSSKTINVFIHNFPEYAFVGRSNVGKSSLINWITGRKKIAKVSSYPGRTQYINHFLIN 67 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + L+D+PGYG+ A KK + LI Y+ R L ++LLID R + Sbjct: 68 N---------QWYLIDLPGYGFF-AEKKIKEKAQKLISDYIFHRKNLVGLFLLIDSRFLI 117 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 +QID D L+ K + + IV TK DKL+ ++ + I N P S+ Sbjct: 118 QQIDLDFIQKLNNKKMDFCIVFTKTDKLNYKLIEKNISFCIEKIENNGFTMPVWFKVSAK 177 Query: 195 KRKGIEVLRKAILETINY 212 K+ G + + I + ++ Sbjct: 178 KKDGRNNIIQYIKKLNDF 195 >gi|118475226|ref|YP_892343.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter fetus subsp. fetus 82-40] gi|118414452|gb|ABK82872.1| GTP-binding protein [Campylobacter fetus subsp. fetus 82-40] Length = 198 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + FL P G E+AF GRSNVGKSS+IN L N + LA++S+ PG+TQ +NF Sbjct: 6 SAKFLTSSVNSLDAPDFGISEVAFLGRSNVGKSSIINALTNHQGLAKSSSTPGKTQLINF 65 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + + VD+PG+GYA+ K +W + +L R ++ L+D Sbjct: 66 FEV--IFDNDGQKIPIIFVDLPGFGYAKVSKSLYSAWQKNLDEFLKNRINIKTFVHLVDS 123 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH + D+++ +L++ + Q +L TK DKL+ + + L+ Sbjct: 124 RHANLEKDENLGVYLNEFIRNDQKILNLYTKCDKLNQSERSKVLKM-----------DSS 172 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 I SS K+ GI+ + I ++ Sbjct: 173 AILVSSTKKTGIDKASETIYNSV 195 >gi|119472911|ref|XP_001258441.1| GTP binding protein (EngB), putative [Neosartorya fischeri NRRL 181] gi|119406593|gb|EAW16544.1| GTP binding protein (EngB), putative [Neosartorya fischeri NRRL 181] Length = 321 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 36/232 (15%) Query: 8 TKSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ + + L + P + PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ Sbjct: 74 SRHSPVKLWSASKFRTTPLSSLEPEVAFLGRSNVGKSSLLNAIMG-KEMCWTSSKPGRTR 132 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F K + L+DMPGYG + WG I++YL R LR ++ Sbjct: 133 EMNAFGIG---GTKGGESKIVLLDMPGYGKGSRTE-----WGIEILKYLQGRRQLRRAFI 184 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK--------LSPTTAQETLEKTKYLI 178 LID HG+K+ D+D+ K A+ +QI+L+K+DK + + + + L+ Sbjct: 185 LIDSLHGIKKKDEDILMLFRKYAIPHQIILSKVDKVLAKRKQQVKSGASVANVAALRSLL 244 Query: 179 RNY------------PTAHPEVIPTSSVKRK------GIEVLRKAILETINY 212 ++ P A E++ S+ GI +R AIL + Sbjct: 245 QHLRPIVQPDGRVEGPGALGEILTCSAETPTGPGQFLGISAIRWAILSAAGF 296 >gi|157164919|ref|YP_001467169.1| GTPase EngB [Campylobacter concisus 13826] gi|112801424|gb|EAT98768.1| GTP-binding protein [Campylobacter concisus 13826] Length = 204 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 104/203 (51%), Gaps = 18/203 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF--- 70 F+ P I P E+ F GRSNVGKSSLIN LVN+KNLA++S+ PG+TQ +NF Sbjct: 9 FITSSPSIKEAPSFVTSEVVFLGRSNVGKSSLINALVNQKNLAKSSSTPGKTQLINFFEA 68 Query: 71 -FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F + + + LVD+PG+GYA+ K D W + +L RS +R LID Sbjct: 69 EFCEQKDEQEEKEKFKLILVDLPGFGYAKVAKSKHDEWRKNLDEFLKFRSDIRLFIHLID 128 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RH ID +V S+L + Q +L TK DKL+ + ++ P Sbjct: 129 ARHFDLDIDVNVDSYLKSFLRADQKILNLYTKSDKLNQSQKSAIMK-----------FDP 177 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 I S++ + GI+ R+AI+ Sbjct: 178 SGILVSTLSKSGIDKAREAIINH 200 >gi|154173698|ref|YP_001407908.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter curvus 525.92] gi|112803367|gb|EAU00711.1| GTP-binding protein [Campylobacter curvus 525.92] Length = 205 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 19/205 (9%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ P I + E+ F GRSNVGKSSLIN LVN+K LA++S+ PG+TQ +NF Sbjct: 6 NAKFISSSPSIKDAAEFALSEVVFLGRSNVGKSSLINALVNQKALAKSSSTPGKTQLINF 65 Query: 71 FVP-----KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 F D S K + + VD+PG+GYA+ K + W + +L RS+++ Sbjct: 66 FEVEFDERDDQSGEKTDKFKIMFVDLPGFGYAKVAKSKHEEWRRNLDEFLKFRSSIKLFV 125 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYP 182 LID RH ID +V +++++ Q +L TK DKL+ ++ L+ Sbjct: 126 HLIDARHFDLDIDVNVNNYINEFLRPDQKILNFYTKADKLNQSSKSTVLK---------- 175 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAIL 207 P S++ + GI+ R+ I+ Sbjct: 176 -FDPNGTLVSTLNKVGIDKARELIV 199 >gi|332213180|ref|XP_003255698.1| PREDICTED: GTP-binding protein 8-like [Nomascus leucogenys] Length = 288 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 99/206 (48%), Gaps = 21/206 (10%) Query: 9 KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQ 66 ++ ++ I P PE+ F GRSNVGKSSLI L + + R S PG T+ Sbjct: 90 RNRIDYVSSAVRIDHAPDLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTK 149 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS----TLR 122 +NFF +VDM GYGY RAP+ VD ++ YL ER ++ Sbjct: 150 KMNFFKVGKH---------FTVVDMKGYGY-RAPEDFVD----MVETYLKERRGRARNVK 195 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLIRNY 181 +LL+D G+++ D ++ A+ Y IVLTKID+ S ++ L K++ Sbjct: 196 RTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDRSSKGHLLKQVLRIQKFVNTKT 255 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAIL 207 P++ P S+V GI +LR I Sbjct: 256 QGYFPQLFPVSAVTFSGIHLLRCFIA 281 >gi|290981580|ref|XP_002673508.1| predicted protein [Naegleria gruberi] gi|284087092|gb|EFC40764.1| predicted protein [Naegleria gruberi] Length = 441 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 98/188 (52%), Gaps = 14/188 (7%) Query: 28 GPPEIAFSGRSNVGKSSLINIL---VNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+I F+GRSNVGKSSLIN L + A S+ PG TQ LN + D N+ Sbjct: 181 SLPKIVFAGRSNVGKSSLINALVTKTGKGGKAAVSSKPGETQSLNCYQLSDAINI----- 235 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+PGYG+A A ++ W I +L S LR V++LID RHG K+ D +F Sbjct: 236 ----VDLPGYGFAFAEEEKRLEWQEQIRNFLLTASKLRRVFILIDARHGFKETDYSFLTF 291 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKRKGIEVL 202 L++ + QI+LTK D L + E IR P H E+I SS K GI+ + Sbjct: 292 LNQNKIKNQIILTKCDLLYDDEIAKQYEYLINQIRVRPFNHTCEEMIVVSSKKMNGIKEI 351 Query: 203 RKAILETI 210 ++ IL + Sbjct: 352 QEEILSFL 359 >gi|13508220|ref|NP_110169.1| GTPase EngB [Mycoplasma pneumoniae M129] gi|2501553|sp|P75303|ENGB_MYCPN RecName: Full=Probable GTP-binding protein EngB gi|1674038|gb|AAB96008.1| GTP-binding, era-like [Mycoplasma pneumoniae M129] gi|301633351|gb|ADK86905.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma pneumoniae FH] Length = 193 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 15/199 (7%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 FL+ ++ P+ E+ F GRSNVGKSSLIN +K LA+TS PGRTQ LNF Sbjct: 2 EARFLKSASDLESCPQDSVKEVCFMGRSNVGKSSLINAFF-QKKLAKTSATPGRTQLLNF 60 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F VD+PGYG+A+ K ++ L+ ++L+ R L V L+ID Sbjct: 61 FEYN----------RKRFVDLPGYGFAKLSKVQKEAITNLLTQFLNFRQNLTGVVLVIDS 110 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 V DQ+V + + +++ ++ K DKL+ + T K + ++ P + + Sbjct: 111 GV-VTVQDQEVVKTILQTGLNFLVIANKFDKLNQSERFHTQNKLAHFLKVNPN---KCLF 166 Query: 191 TSSVKRKGIEVLRKAILET 209 S+ ++V+ K I E Sbjct: 167 VSAKTGYNLQVMHKQIFEL 185 >gi|149194640|ref|ZP_01871736.1| GTPase EngB [Caminibacter mediatlanticus TB-2] gi|149135384|gb|EDM23864.1| GTPase EngB [Caminibacter mediatlanticus TB-2] Length = 197 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 23/204 (11%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P I + E+A GRSNVGKSS +N N+K +A+ S+ PG+T+ +NFF Sbjct: 5 FIKSAPTIKEAIEPNFTEVALLGRSNVGKSSFLNTFTNQK-IAKVSSTPGKTKLINFFEI 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D LVD+PG+GYA+ K + WG + +L R ++ L D RH Sbjct: 64 EDKGK------KYVLVDLPGFGYAKVSKSMLKDWGKNLDEFLKNRYNIKLFIHLRDARHP 117 Query: 134 VKQIDQDVFSFLD---KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 ID +V +L +K V TKIDKL + + +K +PE + Sbjct: 118 DLDIDNNVDEYLKSFLRKDQQILTVFTKIDKLKQSELAKLKQK-----------YPEALF 166 Query: 191 TSSVKRKGIEVLRKAILETI--NY 212 S++K++GI +++ I E + NY Sbjct: 167 VSNLKKRGINKVKEKINEILWGNY 190 >gi|42528074|ref|NP_973172.1| hypothetical protein TDE2574 [Treponema denticola ATCC 35405] gi|81570149|sp|Q73K17|ENGB_TREDE RecName: Full=Probable GTP-binding protein EngB gi|41819119|gb|AAS13091.1| conserved hypothetical protein TIGR00650 [Treponema denticola ATCC 35405] Length = 212 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 14/208 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++G + P+ G E AF GRSN GKSSLIN+LVNRKNL +T + PG T+ +NFF+ Sbjct: 8 FIKGAVKAEQFPEIGVSEFAFFGRSNAGKSSLINMLVNRKNLVKTGSRPGMTREVNFFLV 67 Query: 74 KDFSNLKNNLPA-----------MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 ++L N L D+PGYGYA+ ++ Y + R L+ Sbjct: 68 NRPASLNFNPKTKKFSGPAPKDMFVLTDLPGYGYAKLSGGMTLQIDKMLYEYCTNRPLLK 127 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 ++ L+D R + +++ F + IV TK DK+ ++ + Sbjct: 128 IIFFLMDMRREPTETEKESIGFFHGLNIEVVIVGTKADKIGKND---QIKAKNDWADFFN 184 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETI 210 +I +S+ K+ G + + I + I Sbjct: 185 FDEELIIISSAAKKTGRDNILSLIAKRI 212 >gi|115390012|ref|XP_001212511.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114194907|gb|EAU36607.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 312 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 71/232 (30%), Positives = 111/232 (47%), Gaps = 36/232 (15%) Query: 8 TKSAWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ + + L + P + PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ Sbjct: 70 SRHSPVKLWSASKFRTTPLSSSEPEVAFLGRSNVGKSSLLNAVMG-KEMCWTSSKPGRTR 128 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F K + L+DMPGYG A + WG I++YL R LR +L Sbjct: 129 EMNAFGIG---GTKGGESKIVLLDMPGYGKASRTE-----WGVEIMKYLQGRKQLRRAFL 180 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK--------LSPTTAQETLEKTKYLI 178 LID HG+KQ D D+ K A+ +Q++L+K+DK + + + + L+ Sbjct: 181 LIDSLHGIKQSDADILMLFRKYAIPHQVILSKVDKVLAKKKSQVKSGASAANIVALRTLL 240 Query: 179 RNY------------PTAHPEVIPTSSVK------RKGIEVLRKAILETINY 212 ++ P A E++ S+ GI +R AIL + Sbjct: 241 QDLRPIVQPVGRSEGPGALGEIVTCSAETPVEPGRALGISGVRWAILSAAGF 292 >gi|289547931|ref|YP_003472919.1| ribosome biogenesis GTP-binding protein YsxC [Thermocrinis albus DSM 14484] gi|289181548|gb|ADC88792.1| ribosome biogenesis GTP-binding protein YsxC [Thermocrinis albus DSM 14484] Length = 171 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 17/182 (9%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P + GRSNVGKSSLIN+L+ +K +A S PGRT+ + F + + Sbjct: 6 DKPHVVLVGRSNVGKSSLINMLLGKKVVA-VSKDPGRTRRVTFIPFGE---------KVY 55 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-RCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD+PGYGYAR + ++W ++ Y S L + V+LLID R GV +D + +L Sbjct: 56 LVDVPGYGYARVSHREREAWRRMMEEYFSRYGELIKWVFLLIDSRVGVTPLDVQMIEWLH 115 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + Y++VLTK+D + ++ + E++ TSS + KG + L + Sbjct: 116 YRKLPYKVVLTKVDAATQDEISSAIKSVRK------HTTVEILFTSSREGKGKKELLQYC 169 Query: 207 LE 208 L+ Sbjct: 170 LD 171 >gi|325474715|gb|EGC77901.1| GTP-binding protein engB [Treponema denticola F0402] Length = 212 Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 14/208 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++G + P+ G E AF GRSN GKSSLIN+LVNRKNL +T + PG T+ +NFF+ Sbjct: 8 FIKGAVKAEQFPEIGVSEFAFFGRSNAGKSSLINMLVNRKNLVKTGSRPGMTREVNFFLV 67 Query: 74 KDFSNLKNNLPA-----------MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 ++L N L D+PGYGYA+ ++ Y + R L+ Sbjct: 68 NRLASLNFNPKTKKFSGPAPKDMFVLTDLPGYGYAKLSGGMTLQIDKMLYEYCTNRPLLK 127 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 ++ L+D R + +++ F + IV TK DK+ ++ + + Sbjct: 128 TIFFLMDMRREPTETEKESIGFFHGLNIEVVIVGTKADKIGKND---QIKAKNAWVSFFN 184 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETI 210 +I +S+ K+ G + + I + I Sbjct: 185 FDEELIIISSAAKKTGRDNILSLIAKRI 212 >gi|30350184|gb|AAP31492.1| conserved hypothetical GTP-binding protein [Western X phytoplasma] Length = 195 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 10/202 (4%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 +F++ + P E+ GRSNVGKSS IN L N+K LA S PG+T +N Sbjct: 3 KKSVFIKSIQGPIDCPVPRLSEVFLMGRSNVGKSSFINALTNKKKLALFSKTPGKTTTVN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 +F+ D + LVD PGYGY++ K S +I +L ++ ++ +ID Sbjct: 63 YFLLND---------SFYLVDSPGYGYSKRNKTFKQSVFPMINNFLQNNYFVKIIFQIID 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + G ++D D++ L + + ++L K DK+ +++ K + P + Sbjct: 114 FKVGPTKMDLDIYHNLREYNLPVFLILNKKDKVLKNQVINQMQRIKKEFGAFEENIP-MF 172 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 S + G+ + I + IN Sbjct: 173 LLSCKNKDGLNEIVNLIYDKIN 194 >gi|12045192|ref|NP_073003.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma genitalium G37] gi|1351548|sp|P47577|ENGB_MYCGE RecName: Full=Probable GTP-binding protein EngB gi|3844914|gb|AAC71558.1| GTP-binding protein engB, putative [Mycoplasma genitalium G37] gi|166079027|gb|ABY79645.1| GTP-binding protein engB, putative [synthetic Mycoplasma genitalium JCVI-1.0] Length = 191 Score = 171 bits (435), Expect = 4e-41, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 15/196 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ ++ P+ PEI F GRSNVGKSSLIN +K LA+TS PGRTQ LN+F Sbjct: 5 FLKSASDLKDCPQDNIPEICFMGRSNVGKSSLINAFF-KKKLAKTSATPGRTQLLNYFEY 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 KD VD+PGYG+A+ K D L+ ++L+ RS L V L++D Sbjct: 64 KDK----------RFVDLPGYGFAKINKNKKDFITNLLTQFLNFRSNLVGVVLIVDSGV- 112 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V DQ+V + + +++ IV K DKL+ + +L+ ++ + + S+ Sbjct: 113 VTVQDQEVVKIILQTGLNFLIVANKFDKLNQSERYFSLKNIANFLK---VNFDKCVFAST 169 Query: 194 VKRKGIEVLRKAILET 209 + ++ K I E Sbjct: 170 KTHHNLALVHKKIFEL 185 >gi|290990283|ref|XP_002677766.1| predicted protein [Naegleria gruberi] gi|284091375|gb|EFC45022.1| predicted protein [Naegleria gruberi] Length = 142 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 57/138 (41%), Positives = 87/138 (63%), Gaps = 9/138 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P+IAF+GRSNVGKSSL+N +V+ LAR S+ PG T+ +N+F D Sbjct: 14 PNEKMPQIAFAGRSNVGKSSLLNSIVDSDRLARVSSTPGHTKRINYFNMHDM-------- 65 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + +VD+PGYGYA K+ + W ++ +Y +E + LR V++L+D R+G+ + D + Sbjct: 66 -LYVVDLPGYGYAEGNKEKIKGWNTVLRQYCTENTVLRRVFILLDARYGIYEQDCEFMDM 124 Query: 145 LDKKAVSYQIVLTKIDKL 162 L++ V YQI+LTK DK+ Sbjct: 125 LEESGVPYQIILTKCDKV 142 >gi|187608547|ref|NP_001119874.1| GTP-binding protein 8 [Danio rerio] gi|190359519|sp|B0S8I0|GTPB8_DANRE RecName: Full=GTP-binding protein 8 gi|169158070|emb|CAQ13662.1| novel protein similar to vertebrate GTP-binding protein 8 (putative) (GTPBP8) [Danio rerio] Length = 286 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 96/211 (45%), Gaps = 20/211 (9%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLAR 57 + T+FT K + + +P PE+ F GRSNVGKSSLI L + + R Sbjct: 77 AETLFTPSSKHVINYSTSAVRMDHVPILKQPEVCFMGRSNVGKSSLIRALFSLAPEVEVR 136 Query: 58 TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 S PG T+ LNFF A LVDMPGYG AP+ V+ ++ YL E Sbjct: 137 VSKTPGHTKKLNFFTVG---------KAFTLVDMPGYG-HMAPQDFVE----MVEPYLQE 182 Query: 118 RSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 R L +LL+D G++ D ++ + Y +V+TKID+ + + Sbjct: 183 RHNLARTFLLVDASAGLQSTDLVAVEMFEEFNLPYVLVVTKIDRTRQGALLALALELQDF 242 Query: 178 IRN-YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 I+ P+ SSV+ GI +LR I Sbjct: 243 IKKQTTACFPQPFLVSSVQFSGIHLLRCFIA 273 >gi|193216921|ref|YP_002000163.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma arthritidis 158L3-1] gi|238692481|sp|B3PN57|ENGB_MYCA5 RecName: Full=Probable GTP-binding protein EngB gi|193002244|gb|ACF07459.1| GTPase protein YihA (EngB) [Mycoplasma arthritidis 158L3-1] Length = 183 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 15/194 (7%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F++ + + EI F GRSNVGKSSLIN L ++K +A+TS+ PGRT+ +N+F Sbjct: 2 WKFIKSATDQNNWLEHDQNEIVFWGRSNVGKSSLINALASQK-IAKTSSTPGRTRLINYF 60 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + +VD+PGYG+A KK G+I Y + + +LID + Sbjct: 61 ETQ---------RKKIIVDLPGYGFASMSKKAQSKISGIIDFYFRNSKNSKNICILIDAK 111 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G ID ++ +L + + I++TKIDK + + ++ + + Sbjct: 112 IGFSYIDLEMIDYLKSLGLLFDIIITKIDKANQSQKHRVKQQ-----ALTFSDDINIFMV 166 Query: 192 SSVKRKGIEVLRKA 205 SS K++G+ L + Sbjct: 167 SSEKKQGLSDLVEH 180 >gi|152992813|ref|YP_001358534.1| GTP-binding protein [Sulfurovum sp. NBC37-1] gi|151424674|dbj|BAF72177.1| GTP-binding protein [Sulfurovum sp. NBC37-1] Length = 213 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 101/200 (50%), Gaps = 16/200 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ I E+ F GRSNVGKSS +N L RKNLA++S PG+TQ +NFF Sbjct: 11 FIKSAQSIADSLPEDMSEVVFLGRSNVGKSSTLNSLTQRKNLAKSSATPGKTQLINFFET 70 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N + VD+PG+GYA+ K + W +V ++ R ++R L D RH Sbjct: 71 RYLYN--EESFPVRFVDLPGFGYAKVSKSLKEVWQKNLVEFIEHRISIRLFIHLRDARHP 128 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID DV +++ + Y V TKIDKL+ + L R +P + I Sbjct: 129 HAKIDDDVEAYISEFIRPDQRYLTVFTKIDKLNQKERAK-------LKREFPGS----IT 177 Query: 191 TSSVKRKGIEVLRKAILETI 210 S++K+ G + + IL TI Sbjct: 178 VSNLKKNGHDRVHYEILRTI 197 >gi|157414929|ref|YP_001482185.1| GTPase EngB [Campylobacter jejuni subsp. jejuni 81116] gi|172047094|sp|A8FL71|ENGB_CAMJ8 RecName: Full=Probable GTP-binding protein EngB gi|157385893|gb|ABV52208.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 81116] gi|307747567|gb|ADN90837.1| Probable GTP-binding protein engB [Campylobacter jejuni subsp. jejuni M1] gi|315931848|gb|EFV10803.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 198 Score = 171 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 16/201 (7%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NF Sbjct: 4 SAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F N + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 64 FEVTCKRN--EEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID ++ +L + V TK DKL+ + + + K Sbjct: 122 RHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNEFKDS---------- 171 Query: 188 VIPTSSVKRKGIEVLRKAILE 208 I S++ + G++ L I++ Sbjct: 172 -ILVSNLNKFGLDSLEDIIID 191 >gi|162447399|ref|YP_001620531.1| GTPase [Acholeplasma laidlawii PG-8A] gi|229807530|sp|A9NFM5|ENGB_ACHLI RecName: Full=Probable GTP-binding protein EngB gi|161985506|gb|ABX81155.1| GTPase, YihA subfamily [Acholeplasma laidlawii PG-8A] Length = 191 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 64/189 (33%), Positives = 92/189 (48%), Gaps = 13/189 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ I LPK GRSNVGKSSLIN + NRK LAR S PG+T LN ++ Sbjct: 8 FITSAVSITDLPKDDFDHFLILGRSNVGKSSLINAITNRKKLARVSQTPGKTITLNLYLL 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD PGYGYA+ K ++ +I Y+ L+ + LL+D G Sbjct: 68 NQ---------SLYLVDAPGYGYAKRSKTQTLTFMRMINEYIQLNGHLKKIILLVDFNIG 118 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 Q D D++ L V +V TK DK+ + + + +IR+ ++ TSS Sbjct: 119 PTQDDLDMYIELQAFDVDIIVVTTKYDKVKSSHRLKQ----EKVIRSKFFEGQKIYFTSS 174 Query: 194 VKRKGIEVL 202 + GI+ L Sbjct: 175 ETKFGIDKL 183 >gi|148926634|ref|ZP_01810315.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp. jejuni CG8486] gi|145845153|gb|EDK22248.1| putative ATP /GTP binding protein [Campylobacter jejuni subsp. jejuni CG8486] Length = 198 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 17/206 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NF Sbjct: 4 SAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F N + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 64 FEVACKRN--EEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID ++ +L + V TK DKL+ + + + K Sbjct: 122 RHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNEFKDS---------- 171 Query: 188 VIPTSSVKRKGIEVLRKAIL-ETINY 212 I S++ + G++ L I+ +T+ + Sbjct: 172 -ILVSNLNKFGLDSLEDIIINQTLGF 196 >gi|291320077|ref|YP_003515335.1| GTP binding protein EngB [Mycoplasma agalactiae] gi|290752406|emb|CBH40377.1| GTP binding protein engB [Mycoplasma agalactiae] Length = 194 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 13/201 (6%) Query: 12 WIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 W F++ + K +I F GRSNVGKSSL+N LVN+K ++ S PGRTQ +N+ Sbjct: 2 WKFVKSALKRETWVKCEDCIQICFWGRSNVGKSSLLNALVNQK-ISYVSKQPGRTQFINY 60 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F ++ +VD+PGYGYA+ K+ ++ I +L + + V+LLID Sbjct: 61 FQEENR----------FIVDLPGYGYAQLSKEKIEEMNYWINAFLKDDKCPKVVFLLIDS 110 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVI 189 R G+ +ID + +FL + ++ TKIDKL+ ++K + N Sbjct: 111 RTGITKIDLEKLAFLRAINLPIHLIYTKIDKLNQKEKSALVKKHNEYLDSNLLNESTNSF 170 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS + G++ L I E I Sbjct: 171 LVSSTNKIGLDDLVLFIEENI 191 >gi|116329485|ref|YP_799205.1| GTPase EngB [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329911|ref|YP_799629.1| GTPase EngB [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282316|sp|Q04W49|ENGB_LEPBJ RecName: Full=Probable GTP-binding protein EngB gi|122282735|sp|Q04XC3|ENGB_LEPBL RecName: Full=Probable GTP-binding protein EngB gi|116122229|gb|ABJ80272.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123600|gb|ABJ74871.1| GTPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 221 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F E +P G P+IAF+GRSN GKSSL+N ++ RK+LA+ S+ PG+T+ LNFF Sbjct: 18 FKASYGEANQIPSQGIPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFFFV 77 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD+PG+GY+ K+ ++ L++ YL+ L+C++L+ D + Sbjct: 78 N---------RSIYLVDLPGFGYSANSHKDHEAMMDLLMDYLNLAKDLKCLFLVCDSQRE 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + + ++ ++ + +V TKIDKL+ + + +K K + YP E + S+ Sbjct: 129 LPEEELELIGTCFERNIKPVLVRTKIDKLNQSDLSKLRKKMKNIHELYPML--ETVLVSN 186 Query: 194 VKRKGIEVLRKAILETI 210 KG+ LRK + I Sbjct: 187 KSGKGLPELRKIVDSLI 203 >gi|313678275|ref|YP_004056015.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma bovis PG45] gi|312950660|gb|ADR25255.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma bovis PG45] Length = 193 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 13/201 (6%) Query: 12 WIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 W F++ + + +I F GRSNVGKSSL+N LVN+K ++ S PGRTQ +N+ Sbjct: 2 WKFVKSALKKETWIQCDDCKQICFWGRSNVGKSSLLNALVNQK-ISYVSKQPGRTQFINY 60 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F +D +VD+PGYGYA+ K+ + I +LS+ + V+LLID Sbjct: 61 FQEEDR----------FIVDLPGYGYAQLSKEKIVEMNNWINAFLSQDKNPKTVFLLIDS 110 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAHPEVI 189 R G+ +ID + SFL + ++ TKIDKL+ ++K + Sbjct: 111 RTGITKIDAEKISFLRSINLPIHLIYTKIDKLNQREKSALVKKHNEYLSSKLLDDTTHSF 170 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS + GI L I I Sbjct: 171 LVSSTNKIGINELVDFIENNI 191 >gi|219123096|ref|XP_002181867.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406468|gb|EEC46407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 489 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 27/231 (11%) Query: 3 SHTIFTKSAWIFLRGVPE------IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLA 56 ++F + +L V + + L P + PE+AF GRSNVGKSSLIN L+ R++LA Sbjct: 177 QPSLFHNGRFEYLSSVSDGSSKKPLQLPPDSDVPEVAFLGRSNVGKSSLINALM-RRDLA 235 Query: 57 RTSNAPGRTQHLNFF--VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNV-DSWGGLIVR 113 R S PGRTQ ++ F VP+ + + A A +SW L R Sbjct: 236 RISKQPGRTQQVHLFGIVPRAYEPHHHPRTTTAPPPRTTPPPLAAYSSICPESWQVLTQR 295 Query: 114 YLSERS----TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 +L R LR ++LL+D RHG + ID V ++L+ + Y +VLTK D + Sbjct: 296 FLRTRRRDTGNLRRLFLLVDARHGTQTIDHFVMTWLEDNDIPYTVVLTKADCVGAPQIVR 355 Query: 170 TLEKT--KYLIRNYPTAH-----------PEVIPTSSVKRKGIEVLRKAIL 207 + + +Y A P V TS+ +G+ L I Sbjct: 356 MVNQICLRYAAEVGHAADGDVAPAALYMSPIVHVTSAKGGRGLAELLSTIE 406 >gi|121612815|ref|YP_001000351.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter jejuni subsp. jejuni 81-176] gi|167005296|ref|ZP_02271054.1| GTPase EngB [Campylobacter jejuni subsp. jejuni 81-176] gi|166225949|sp|A1VZ10|ENGB_CAMJJ RecName: Full=Probable GTP-binding protein EngB gi|87250438|gb|EAQ73396.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 198 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 16/197 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF Sbjct: 7 FITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEV 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N + +D+PG+GYA+ K + W + +L R++++ LID RH Sbjct: 67 TCKRN--EEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHT 124 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID ++ +L + V TK DKL+ + + + K I Sbjct: 125 HLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNEFKDS-----------IL 173 Query: 191 TSSVKRKGIEVLRKAIL 207 S++ + G++ L I+ Sbjct: 174 VSNLNKFGLDSLEDIII 190 >gi|284925910|gb|ADC28262.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter jejuni subsp. jejuni IA3902] Length = 198 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 16/200 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NF Sbjct: 4 SAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F N + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 64 FEVTCKRN--EEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID ++ +L + V TK DKL+ + + + K Sbjct: 122 RHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNEFKDS---------- 171 Query: 188 VIPTSSVKRKGIEVLRKAIL 207 I S++ + G++ L I+ Sbjct: 172 -ILVSNLNKFGLDSLEDIII 190 >gi|226693391|ref|NP_001152801.1| GTP-binding protein 8 isoform 2 [Mus musculus] gi|76825456|gb|AAI07218.1| Gtpbp8 protein [Mus musculus] Length = 218 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 17/193 (8%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFFVPKDF 76 E+ LP+ ++ F GRSNVGKSSLI L + R S PG T+ +NFF Sbjct: 34 AEVLRLPQKQLTKVCFIGRSNVGKSSLIKALFSLAPDVEVRISKKPGHTKKMNFFKVGKH 93 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 LVDMPGYGY RAP+ VD ++ YL ER+ L+ +LL+D G+ + Sbjct: 94 ---------FTLVDMPGYGY-RAPEDFVD----MVETYLKERNNLKRTFLLVDSVVGITK 139 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 +D ++ A+ Y ++LTKIDK S ++ L+ K++ P++ P S+V Sbjct: 140 LDNIAIEMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQKFVNTQTQGCFPQLFPISAVT 199 Query: 196 RKGIEVLRKAILE 208 G+ +L+ I + Sbjct: 200 NSGVHLLKCFIAD 212 >gi|24212844|ref|NP_710325.1| ribosome biogenesis GTP-binding protein YsxC [Leptospira interrogans serovar Lai str. 56601] gi|45656040|ref|YP_000126.1| ribosome biogenesis GTP-binding protein YsxC [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|67460340|sp|Q72W11|ENGB_LEPIC RecName: Full=Probable GTP-binding protein EngB gi|67460409|sp|Q8F9P7|ENGB_LEPIN RecName: Full=Probable GTP-binding protein EngB gi|24193501|gb|AAN47343.1| GTPase EngB [Leptospira interrogans serovar Lai str. 56601] gi|45599273|gb|AAS68763.1| GTP binding protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 217 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 64/197 (32%), Positives = 110/197 (55%), Gaps = 11/197 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + +P G P+IAF+GRSN GKSSL+N ++ RK+LA+ S+ PG+T+ LNFF Sbjct: 18 FKASYGKADQIPSQGTPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFFFV 77 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ LVD+PG+GY+ K+ ++ GL++ YL+ L+C++L+ D + Sbjct: 78 NH---------SIYLVDLPGFGYSANSHKDHEAMMGLLMDYLNLAKDLKCLFLVCDSQRE 128 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + + ++ ++ + +V TKIDKL+ + + +K K + YP E + S+ Sbjct: 129 LPEEELELIGTCFERNIKPVLVRTKIDKLNQSDLSKLRKKMKNIHELYPML--ETVLVSN 186 Query: 194 VKRKGIEVLRKAILETI 210 KG+ LRK + I Sbjct: 187 KSGKGLPELRKIVYSLI 203 >gi|57167676|ref|ZP_00366816.1| GTP-binding protein EngB [Campylobacter coli RM2228] gi|57020798|gb|EAL57462.1| GTP-binding protein EngB [Campylobacter coli RM2228] Length = 196 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 16/201 (7%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +K LA++S PG+TQ +N Sbjct: 4 SAKFITSLDKFDKNFASHFSEVAFLGRSNVGKSSLINSLCKQKKLAKSSATPGKTQLINI 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + ++ +D+PG+GYA+ K + W + +L RS+++ LID Sbjct: 64 FEV--LCKKDEDKFSIHFIDLPGFGYAKVSKNLKEIWNKNLDEFLKLRSSIKLFVHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH ID ++ +L V TK DKL+ + + K Sbjct: 122 RHTNLDIDLNLDEYLKSFLKPDQRVLKVFTKCDKLNQSEKAKLKNNFKDA---------- 171 Query: 188 VIPTSSVKRKGIEVLRKAILE 208 I S++ + G++ L I++ Sbjct: 172 -ILISNLNKMGLDDLEHEIIK 191 >gi|283954068|ref|ZP_06371593.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 414] gi|283794347|gb|EFC33091.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 414] Length = 198 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 17/206 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NF Sbjct: 4 SAKFITSLAKFDKNFTSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F N + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 64 FEVTCKKN--EEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKFRTSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID ++ +L V TK DKL+ + + + K + Sbjct: 122 RHTHLEIDMNLNDYLKNFLRPDQKILKVFTKCDKLNQSEKTKLKNEFK-----------D 170 Query: 188 VIPTSSVKRKGIEVLRKAIL-ETINY 212 + S++ + G++ L I+ +T+ + Sbjct: 171 FLLVSNLSKFGLDSLEDIIINQTLGF 196 >gi|205355500|ref|ZP_03222271.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] gi|205346734|gb|EDZ33366.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni CG8421] Length = 198 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 16/200 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NF Sbjct: 4 SAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F N + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 64 FEVACKRN--EEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID ++ +L + V TK DKL+ + + + K Sbjct: 122 RHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNEFKDS---------- 171 Query: 188 VIPTSSVKRKGIEVLRKAIL 207 I S++ + G++ L I+ Sbjct: 172 -ILVSNLNKFGLDSLEDIII 190 >gi|70951784|ref|XP_745105.1| GTP-binding protein [Plasmodium chabaudi chabaudi] gi|56525322|emb|CAH75281.1| GTP-binding protein, putative [Plasmodium chabaudi chabaudi] Length = 264 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 I P+IA GRSNVGKSSLIN L+N + +A+ S PGRT+HL + Sbjct: 48 AQTIHKYKPLDIPQIAIFGRSNVGKSSLINALMNYREVAQASKTPGRTRHLFIY------ 101 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N L +++VD+PGYG+A+ K+ D+W LI YL++ L+ LI+C Sbjct: 102 ---NLLNHISVVDLPGYGFAKVSKELRDNWSILIEEYLNKAKNLKRALCLIECTELFTPY 158 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY---------------- 181 D + K + +QI++TKIDKL + K I NY Sbjct: 159 DYVLLDMFIMKNIPFQIIVTKIDKLKAEELHHAMIKIISTIENYKKKVKVFNETKHKKGN 218 Query: 182 --------PTAHPEVIPTSSVKRKGIEVLRKAI 206 + + SS+KR GI+ LR + Sbjct: 219 TFKKENCEFNINEYLFNVSSLKRFGIQELRANL 251 >gi|224373216|ref|YP_002607588.1| GTP-binding protein [Nautilia profundicola AmH] gi|223588958|gb|ACM92694.1| GTP-binding protein [Nautilia profundicola AmH] Length = 189 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 21/200 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ P I + E+A GRSNVGKSS +N N+K +A+TS PG+T+ +NFF Sbjct: 5 FITSAPSIKEAIEPNFTEVALLGRSNVGKSSFLNAFTNQK-IAKTSQTPGKTRLINFFEV 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D + LVD+PG+GYA+ K + WG + +L R ++ L D RH Sbjct: 64 ED------DGKKYVLVDLPGFGYAKVSKSMLKDWGKNLDEFLKNRFNIKLFIHLRDARHP 117 Query: 134 VKQIDQDVFSFL---DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 ID +V ++ +K + TKIDKL + + +K +P+ + Sbjct: 118 DLDIDNNVDEYINSFKRKDQQLLTIFTKIDKLKQSELAKLKQK-----------YPDALY 166 Query: 191 TSSVKRKGIEVLRKAILETI 210 S++K++G + +++ I E + Sbjct: 167 VSNMKKRGFDQVKRKINEIL 186 >gi|86153198|ref|ZP_01071402.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842924|gb|EAQ60135.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni HB93-13] gi|315928939|gb|EFV08193.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 198 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 16/200 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NF Sbjct: 4 SAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F N + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 64 FEVTCKRN--EEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID ++ +L + V TK DKL+ + + + K Sbjct: 122 RHIHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNEFKDS---------- 171 Query: 188 VIPTSSVKRKGIEVLRKAIL 207 I S++ + G++ L I+ Sbjct: 172 -ILVSNLNKFGLDSLEDIII 190 >gi|326912924|ref|XP_003202794.1| PREDICTED: GTP-binding protein 8-like [Meleagris gallopavo] Length = 220 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 17/185 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 ++ ++ F GRSNVGKSSLI L + + R S PG T+ +NFF + Sbjct: 38 RSSLAQVCFVGRSNVGKSSLIRALFSLAPEVEVRVSKTPGHTKKMNFFNVGKY------- 90 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVDMPGYGY APK VD ++ YL ER L+ +LL+D G++ D Sbjct: 91 --FTLVDMPGYGY-NAPKDFVD----MVEAYLQERHNLKRTFLLVDAVVGIQSTDLIAVE 143 Query: 144 FLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 L++ + Y +VLTKID+ S + L K++ P++ SSV+ G+ +L Sbjct: 144 MLEEFGIPYVMVLTKIDRASKGLLLKNVLGIQKFVKEKTQGCFPQLFLVSSVEFSGVHLL 203 Query: 203 RKAIL 207 R + Sbjct: 204 RCFVA 208 >gi|163860137|gb|ABY41232.1| putative GTP-binding protein [Pseudomonas fluorescens] Length = 146 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 10/142 (7%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ ++ P E+AF+GRSN GKSS +N L +LARTS PGRTQ LNFF Sbjct: 15 TFMLSAAKVDQCPDDEGFEVAFAGRSNAGKSSALNTLT-HASLARTSKTPGRTQLLNFFK 73 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 D LVD+PGYGYA+ P W + YL R +L+ + L++D RH Sbjct: 74 LDDER---------RLVDLPGYGYAKVPIPLKQHWQRHLEAYLGSRESLKGLILMMDIRH 124 Query: 133 GVKQIDQDVFSFLDKKAVSYQI 154 + D + + + I Sbjct: 125 PMTDFDLLMLDWAVASGMPMHI 146 >gi|86151859|ref|ZP_01070073.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 260.94] gi|85841488|gb|EAQ58736.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 260.94] Length = 198 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 16/197 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF Sbjct: 7 FITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEV 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N + + +D+PG+GYA+ K + W + +L R++++ LID RH Sbjct: 67 TCKRNKE--KFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHT 124 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID ++ +L + V TK DKL+ + + + K I Sbjct: 125 HLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNEFKDS-----------IL 173 Query: 191 TSSVKRKGIEVLRKAIL 207 S++ + G++ L I+ Sbjct: 174 VSNLNKFGLDSLEDIII 190 >gi|291277358|ref|YP_003517130.1| GTP-binding protein Engb [Helicobacter mustelae 12198] gi|290964552|emb|CBG40405.1| probable GTP-binding protein Engb [Helicobacter mustelae 12198] Length = 205 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 13/201 (6%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 FL ++ P EIAF GRSNVGKS+ IN++ N LA+ S+ PG+TQ +NFF+ Sbjct: 8 TFLTSAKKLQDCPPEDLAEIAFLGRSNVGKSTFINLMANHAKLAKCSSTPGKTQLINFFL 67 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + VD+PG+GYA+ K W + +L RS+++ LID RH Sbjct: 68 MR--CEHEGREFFFRFVDLPGFGYAKVCKDLKREWEKNLWDFLQYRSSIKLFLHLIDGRH 125 Query: 133 GVKQIDQDVFSFLDKK---AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 ID+ V L+++ S + TK DKL+ T+ R + + Sbjct: 126 VDLPIDESVSQILEQRCRGDQSVLKIYTKCDKLNANER------TRLAQRGLLMSTDSTL 179 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS G E + + I + + Sbjct: 180 LRSSQ--GGRERVMQEIFKRV 198 >gi|197294280|ref|YP_001798821.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Phytoplasma australiense] gi|171853607|emb|CAM11478.1| GTP-binding protein [Candidatus Phytoplasma australiense] Length = 192 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 66/197 (33%), Positives = 97/197 (49%), Gaps = 13/197 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R + I P PEI GRSNVGKSS IN L RK LA+TS PG+T LN++ Sbjct: 7 FIRSIENIKDQPLENYPEIILMGRSNVGKSSFINALTQRKKLAKTSQTPGKTITLNYYYV 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D + L+D PGYGY++ K + +I+ +L + + L+ ++ LID + G Sbjct: 67 ND---------SFYLIDTPGYGYSKRSKSIQKQFLPMIISFLEQSNRLKAIFQLIDFKIG 117 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 Q D + L K IV K D++ TT L+K + N+ T SS Sbjct: 118 PTQEDDRIHQALLKAQFEVIIVFVKKDQVKKTTQPNQLKK----LINHFTNIKRFFLVSS 173 Query: 194 VKRKGIEVLRKAILETI 210 K++G + L +L + Sbjct: 174 AKKEGFKDLTDFLLSLV 190 >gi|323342870|ref|ZP_08083102.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463982|gb|EFY09176.1| ribosome biogenesis GTP-binding protein YsxC [Erysipelothrix rhusiopathiae ATCC 19414] Length = 191 Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 15/201 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + + P+ G EI G+SNVGKSSLIN + NRK LA PG+T+ +N Sbjct: 6 NDAQLIISAAHSSQFPETGQKEIVMVGKSNVGKSSLINAITNRKKLAYVGQTPGKTRLIN 65 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 F+ + + L D+PGYG+A K+ +G L+ Y R + +L+D Sbjct: 66 FYHINE---------EVILTDVPGYGFANRSKQEQIHYGTLMDSYFELRHP-SVMLVLVD 115 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R GV Q D + F + Y +VL+K+DKLS + + + +P V+ Sbjct: 116 VRRGVSQDDLMMIQFAIHYGIRYALVLSKVDKLSKNKIN---NIKRDVFKEFP--DVTVL 170 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S++K + + + K I + I Sbjct: 171 EFSTLKNETRDPIIKFIEQNI 191 >gi|315124164|ref|YP_004066168.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017886|gb|ADT65979.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 198 Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 16/197 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NFF Sbjct: 7 FITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINFFEV 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N + +D+PG+GYA+ K + W + +L R++++ LID RH Sbjct: 67 ACKRN--EEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDSRHT 124 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID ++ +L + V TK DKL+ + + + K I Sbjct: 125 HLEIDVNLNDYLKRFLQPDQKILKVFTKCDKLNQSEKAKLKNEFKDS-----------IL 173 Query: 191 TSSVKRKGIEVLRKAIL 207 S++ + G++ L I+ Sbjct: 174 VSNLNKFGLDSLEDIII 190 >gi|86149895|ref|ZP_01068124.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88596910|ref|ZP_01100146.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|218562300|ref|YP_002344079.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|13124225|sp|Q9PHL7|ENGB_CAMJE RecName: Full=Probable GTP-binding protein EngB gi|85839713|gb|EAQ56973.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190599|gb|EAQ94572.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112360006|emb|CAL34795.1| putative ATP/GTP binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 198 Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 16/200 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NF Sbjct: 4 SAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 64 FEV--ICRRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID ++ +L + V TK DKL+ + + + K Sbjct: 122 RHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNEFKDS---------- 171 Query: 188 VIPTSSVKRKGIEVLRKAIL 207 I S++ + G++ L I+ Sbjct: 172 -ILVSNLNKFGLDSLEDIII 190 >gi|119600062|gb|EAW79656.1| GTP-binding protein 8 (putative), isoform CRA_d [Homo sapiens] Length = 304 Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 72/231 (31%), Positives = 105/231 (45%), Gaps = 40/231 (17%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEIA----------------FSGR----SN 39 + IFT ++ ++ I P PE+ F GR SN Sbjct: 81 ADNIFTATERNRIDYVSSAVRIDHAPDLPRPEVRGDSHGSPARRRHSANRFPGRPARGSN 140 Query: 40 VGKSSLINILVNR--KNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYA 97 VGKSSLI L + + R S PG T+ +NFF +VDMPGYG+ Sbjct: 141 VGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKH---------FTVVDMPGYGF- 190 Query: 98 RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLT 157 RAP+ VD ++ YL ER L+ +LL+D G+++ D ++ A+ Y IVLT Sbjct: 191 RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLT 246 Query: 158 KIDKLSPTT-AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 KIDK S ++ L+ K++ P++ P S+V GI +LR I Sbjct: 247 KIDKSSKGHLLKQVLQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLRCFIA 297 >gi|330996286|ref|ZP_08320171.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella xylaniphila YIT 11841] gi|329573478|gb|EGG55085.1| ribosome biogenesis GTP-binding protein YsxC [Paraprevotella xylaniphila YIT 11841] Length = 157 Score = 168 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 10/164 (6%) Query: 48 ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSW 107 +L N K LA+TS+ PG+T +N F+ LVD+PGYGYA+ KK + Sbjct: 1 MLANNKKLAKTSSTPGKTLLINHFLIN---------KEWYLVDLPGYGYAKISKKEQEKL 51 Query: 108 GGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA 167 +I Y+ R + +++L+D RH ++ID + +L + + + IV TK DK PT Sbjct: 52 QQIISSYILRREQMTNLFVLVDSRHEPQKIDMEFIEWLGENGIPFSIVFTKADKSKPTKL 111 Query: 168 QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + ++ ++ P TSS + G L I E+IN Sbjct: 112 KANIDIYLKTLKEQWEELPPYFITSSENKTGRTELLNYI-ESIN 154 >gi|57236963|ref|YP_178764.1| GTPase EngB [Campylobacter jejuni RM1221] gi|81819540|sp|Q5HVC1|ENGB_CAMJR RecName: Full=Probable GTP-binding protein EngB gi|57165767|gb|AAW34546.1| GTP-binding protein [Campylobacter jejuni RM1221] gi|315058064|gb|ADT72393.1| GTP-binding protein EngB [Campylobacter jejuni subsp. jejuni S3] Length = 198 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 16/200 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NF Sbjct: 4 SAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 64 FEV--ICKRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID ++ +L + V TK DKL+ + + + K Sbjct: 122 RHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNEFKDS---------- 171 Query: 188 VIPTSSVKRKGIEVLRKAIL 207 I S++ + G++ L I+ Sbjct: 172 -ILVSNLNKFGLDSLEDIII 190 >gi|301165825|emb|CBW25398.1| putative GTP-binding protein engB [Bacteriovorax marinus SJ] Length = 224 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 3/179 (1%) Query: 34 FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--PKDFSNLKNNLPAMALVDM 91 F GRSNVGKSS IN L K +A+ S PGRT+ +N F K+ + +LP D+ Sbjct: 37 FVGRSNVGKSSTINTLFGNK-IAKVSKTPGRTREINIFSFKLKNDGKIVEDLPEFYFYDL 95 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYG+A K+ +W L+ + S + + D RH ++ DQ+ FL Sbjct: 96 PGYGHAEVSKEMSKNWEILMTTFFQNISLHTLMVNIQDARHPNQKSDQEFHQFLKGFNFE 155 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++ KIDKL + L K K ++ ++ TS+ K+ GI + +AI+ + Sbjct: 156 TFLLFNKIDKLKKQKERAALNKLKPVLSKEFKWVRQIYFTSAEKKDGIAQVEEAIISYL 214 >gi|326433254|gb|EGD78824.1| GTPase EngB [Salpingoeca sp. ATCC 50818] Length = 249 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 23/206 (11%) Query: 11 AWIFLRGVPEIGLLPK--AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 + FL P++ +P E+ G SNVGKS+L+N L+ K LA TS PG T+ L Sbjct: 52 PFKFLTSAPKLNAVPPLAVDQAEVVLMGASNVGKSTLLNALLGTK-LAYTSKTPGHTKML 110 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 NFF + +VD+PGYG+ L+ Y R C LLI Sbjct: 111 NFFQ---------GQRHLRVVDVPGYGFGS-----HQHQMTLLGDYFHNRQGHACACLLI 156 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE- 187 D + G+K +D FS L + + Y+++LTK D+L +E + + + + Sbjct: 157 DAKKGIKDLDLAAFSLLLEHFIPYRVLLTKADRLPVGPLRERILECEQTLTLSAQEFNPA 216 Query: 188 -----VIPTSSVKRKGIEVLRKAILE 208 V P S+ +RKG++ +R +I E Sbjct: 217 TSPVLVQPVSAKQRKGLDQVRASICE 242 >gi|315638535|ref|ZP_07893711.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter upsaliensis JV21] gi|315481379|gb|EFU72007.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter upsaliensis JV21] Length = 196 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 16/203 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S+ FL + + +A E+AF GRSNVGKSSLIN L +K LA++S+ PG+TQ +N Sbjct: 3 SSATFLTSLAKFDPNFEANCAEVAFLGRSNVGKSSLINTLCKQKKLAKSSSTPGKTQLIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF K N + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 63 FFEIKCKKN--EEEFKIHFIDLPGFGYAKVSKNLKEIWNKNLDEFLKLRTSIKLFLHLID 120 Query: 130 CRHGVKQIDQDVFSFLDKK---AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RH +ID V ++L + TK DKL+ + K ++N+ Sbjct: 121 ARHTNLEIDLSVDAYLKSFLRGDQQILKIFTKADKLNQSQ--------KARLKNHFENS- 171 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 + S++ + G+ +L ILE Sbjct: 172 --LLISNLNKSGLALLENIILEK 192 >gi|226293347|gb|EEH48767.1| GTP-binding protein [Paracoccidioides brasiliensis Pb18] Length = 323 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 44/244 (18%) Query: 3 SHTIF--TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 + + F +K + I + E +P + PE+ F GRSNVGKSSL+N L+++ ++ TS+ Sbjct: 64 AESFFKSSKHSPIQMWTASEFRTIPMSNVPEVVFLGRSNVGKSSLLNALMDQ-DVCYTSS 122 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 GRT +N + K + LVD PGYG + WG I++YL++R Sbjct: 123 KIGRTHTINAYGVG---GRKAGEAQVVLVDTPGYGKGS-----HEEWGKEIIKYLTKRKQ 174 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID---------KLSPTTAQETL 171 LR ++LID HG+K D+D+ S L A+ +Q++L+K D ++ + Sbjct: 175 LRRTFVLIDSHHGLKPGDRDILSLLRSTAIPHQVILSKADSVLVKGNSKRVPRGITDAKI 234 Query: 172 EKTKYLIRNYPT------------------AHPEVIPTSS------VKRKGIEVLRKAIL 207 +K L A E+I S+ GI +R A+L Sbjct: 235 QKLASLAERTLHKVQPDRDVGKGGVELGVPALGEIIACSARVTNEYESYLGINAIRWAVL 294 Query: 208 ETIN 211 + Sbjct: 295 RAVG 298 >gi|148377409|ref|YP_001256285.1| GTPase EngB [Mycoplasma agalactiae PG2] gi|238686660|sp|A5IXT1|ENGB_MYCAP RecName: Full=Probable GTP-binding protein EngB gi|148291455|emb|CAL58840.1| GTP binding protein engB [Mycoplasma agalactiae PG2] Length = 194 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 13/201 (6%) Query: 12 WIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 W F++ + K +I F GRSNVGKSSL+N LVN+K ++ S PGRTQ +N+ Sbjct: 2 WKFVKSALKKETWVKCEDCIQICFWGRSNVGKSSLLNALVNQK-ISYVSKQPGRTQFINY 60 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F ++ +VD+PGYGYA+ K+ ++ I +L + + ++LLID Sbjct: 61 FQEENR----------FIVDLPGYGYAQLSKEKIEEMNYWISAFLKDDKCTKVMFLLIDS 110 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR-NYPTAHPEVI 189 R G+ +ID + +FL + ++ TKIDKL+ ++K + N Sbjct: 111 RTGITKIDLEKLAFLKAINLPIHLIYTKIDKLNQKEKSALVKKHNEYLDSNLLNESTNSF 170 Query: 190 PTSSVKRKGIEVLRKAILETI 210 SS + G++ L I E I Sbjct: 171 LVSSTNKIGLDDLVLFIEENI 191 >gi|217077841|ref|YP_002335559.1| protein containing GTP binding domain [Thermosipho africanus TCF52B] gi|226741184|sp|B7IDZ1|ENGB_THEAB RecName: Full=Probable GTP-binding protein EngB gi|217037696|gb|ACJ76218.1| protein containing GTP binding domain [Thermosipho africanus TCF52B] Length = 194 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 62/187 (33%), Positives = 105/187 (56%), Gaps = 15/187 (8%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ E F GRSNVGKS+L+NIL R N+A+TS PG+T +NF+ + Sbjct: 17 DKYPESLNGEFVFVGRSNVGKSTLLNILTGR-NIAKTSKKPGKTASINFYKINN------ 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQD 140 + VD+PGYGYA+ + W +I Y S+R+ ++ V++LID RH +++ D+ Sbjct: 70 ---SFYFVDLPGYGYAKVSVEERARWRKIIENYFSKRAWNIKLVFVLIDGRHELQKNDEI 126 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +L + + + IV+TK+DKL + + + K L + +IP S++ R+GI+ Sbjct: 127 LLEWLKELELDFAIVMTKMDKLKNSERAKMIRYYKDL----YGENYTIIPYSAITREGID 182 Query: 201 VLRKAIL 207 + + I Sbjct: 183 KIYELIE 189 >gi|283956064|ref|ZP_06373551.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 1336] gi|283792384|gb|EFC31166.1| GTP-binding protein [Campylobacter jejuni subsp. jejuni 1336] Length = 198 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 16/200 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NF Sbjct: 4 SAKFITSLVKFDEKLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F N + +D+PG+GYA+ K W + +L R++++ LID Sbjct: 64 FEVTCKRN--EEKFNINFIDLPGFGYAKVSKNLKAIWNQNLDEFLKLRTSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH +ID ++ +L + V TK DKL+ + + K K Sbjct: 122 RHTHLEIDANLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNKFKDS---------- 171 Query: 188 VIPTSSVKRKGIEVLRKAIL 207 I S++ + G++ L I+ Sbjct: 172 -ILVSNLNKIGLDSLEDIII 190 >gi|153952494|ref|YP_001398392.1| GTPase EngB [Campylobacter jejuni subsp. doylei 269.97] gi|166225948|sp|A7H4G2|ENGB_CAMJD RecName: Full=Probable GTP-binding protein EngB gi|152939940|gb|ABS44681.1| GTP-binding protein [Campylobacter jejuni subsp. doylei 269.97] Length = 199 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 18/207 (8%) Query: 11 AWIFLRG-VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ V + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +N Sbjct: 4 SAKFITSLVVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLIN 63 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF N + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 64 FFEVTCKRN--EEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKFRTSIKLFIHLID 121 Query: 130 CRHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RH +ID ++ +L + V TK DKL+ + + K Sbjct: 122 SRHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKARLKNEFKDS--------- 172 Query: 187 EVIPTSSVKRKGIEVLRKAIL-ETINY 212 I S++ + G++ L I+ +T+ + Sbjct: 173 --ILVSNLNKFGLDSLEDVIINQTLGF 197 >gi|330940305|ref|XP_003305941.1| hypothetical protein PTT_18921 [Pyrenophora teres f. teres 0-1] gi|311316819|gb|EFQ85963.1| hypothetical protein PTT_18921 [Pyrenophora teres f. teres 0-1] Length = 980 Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 122/241 (50%), Gaps = 49/241 (20%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVN---RKNLARTSNAPGRTQHLNFF 71 LR + + L P++ PE+AF GRSNVGKSSL+N LVN R LARTS PG T+ +N + Sbjct: 286 LRSMAQFRLFPESDVPEVAFVGRSNVGKSSLLNTLVNADIRALLARTSATPGFTKTMNLY 345 Query: 72 VPK-----------DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 D + + +VDMPGYG + ++ +WG I++Y+ R Sbjct: 346 GLGPGNGVTIKQQPDGRDKIVGKNGLTIVDMPGYG-----EGSLAAWGTEILKYIQNRKQ 400 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE----------- 169 LR V++LID +HGVK D+ + + L VS+Q++L+K+DK+ A+E Sbjct: 401 LRRVFVLIDAQHGVKDKDRSLLATLRLSGVSHQVILSKLDKIFIPQAKEIKRYDGKSPRM 460 Query: 170 ------------TLEKTKYLI--RNYPTAHPEVIPTSSV-----KRKGIEVLRKAILETI 210 T+E K I + A E++ S+ KR G++ +R A+L+ + Sbjct: 461 LKPKGTMIGLRHTMEDLKEDIQPKVGGGALGEILGVSAETVVDGKRLGVDHVRYAVLKAV 520 Query: 211 N 211 Sbjct: 521 G 521 >gi|82541411|ref|XP_724947.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23479777|gb|EAA16512.1| probable GTP-binding protein engb-related [Plasmodium yoelii yoelii] Length = 236 Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 I P+IA GRSNVGKSSLIN L+N + +A+ S PGRT+HL + Sbjct: 20 AQTIHKYKPLDIPQIAIFGRSNVGKSSLINALMNYREVAQASKTPGRTRHLFIY------ 73 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N L +++VD+PGYG+A+ K D+W LI YL++ L+ LI+C Sbjct: 74 ---NLLNYISVVDLPGYGFAKVSKSLRDNWSILIEEYLNKAKNLKRALCLIECTELFTPY 130 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY---------------- 181 D + K + +QI++TKIDKL + K +I NY Sbjct: 131 DYVLLDMFIMKNIPFQIIVTKIDKLKAEELHHAMIKIISIIENYKKKVKVFNENIHKKNN 190 Query: 182 --------PTAHPEVIPTSSVKRKGIEVLRKAI 206 + + SS+KR GI+ LR + Sbjct: 191 TFKKESCEFNINEYLFNVSSLKRFGIQELRANL 223 >gi|67538696|ref|XP_663122.1| hypothetical protein AN5518.2 [Aspergillus nidulans FGSC A4] gi|40743488|gb|EAA62678.1| hypothetical protein AN5518.2 [Aspergillus nidulans FGSC A4] gi|259485030|tpe|CBF81754.1| TPA: GTP binding protein (EngB), putative (AFU_orthologue; AFUA_6G13010) [Aspergillus nidulans FGSC A4] Length = 332 Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 60/163 (36%), Positives = 88/163 (53%), Gaps = 10/163 (6%) Query: 8 TKSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ + L + P + PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ Sbjct: 80 SRHSPKKLWSAAKFRTTPLSSIEPEVAFLGRSNVGKSSLLNAVMG-KEMCWTSSKPGRTR 138 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F K + L+DMPGYG A + WG I++YL R LR +L Sbjct: 139 EMNAFGIG---GTKGGESKIVLLDMPGYGKASRTE-----WGVEIMKYLQGRKQLRRAFL 190 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 LID HG+K D + S + A+ +QI+L+K+DKL + Sbjct: 191 LIDSEHGIKPTDAAILSLFRQYAIPHQIILSKVDKLLFNKRPK 233 >gi|39938503|ref|NP_950269.1| ribosome biogenesis GTP-binding protein YsxC [Onion yellows phytoplasma OY-M] gi|39721612|dbj|BAD04102.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M] Length = 196 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 13/202 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+R + +P PEI GRSNVGKS+ IN L RK LA+ S PG+T LN Sbjct: 3 KKATFVRSIVHFKDIPLKKQPEIVLMGRSNVGKSTFINALTQRKKLAKISQTPGKTITLN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 ++ + + L+D PGYGYA+ K+ +I+ +L + S L+ V+ LID Sbjct: 63 YYDINE---------SFYLIDTPGYGYAKKSKEIQKQLLPMIISFLEQTSHLKAVFQLID 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + G Q D + L + ++ K DK+ + L+ ++ N+ Sbjct: 114 FKVGATQEDDRIHQALLQAGFEVVLLFVKKDKVKKNLVPKQLK----MLVNHFPQIKYFF 169 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 SS +++G+E L+ + + ++ Sbjct: 170 LISSKQQEGLEELKLFLSQLMD 191 >gi|57242609|ref|ZP_00370546.1| GTP-binding protein [Campylobacter upsaliensis RM3195] gi|57016538|gb|EAL53322.1| GTP-binding protein [Campylobacter upsaliensis RM3195] Length = 196 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 16/203 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 S+ FL + + +A E+AF GRSNVGKSSLIN L +K LA++S+ PG+TQ +N Sbjct: 3 SSATFLTSLAKFDPNFEANCAEVAFLGRSNVGKSSLINTLCKQKKLAKSSSTPGKTQLIN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 FF K N + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 63 FFEIKCKKN--EEEFKIHFIDLPGFGYAKVSKNLKEIWNKNLDEFLKLRTSIKLFLHLID 120 Query: 130 CRHGVKQIDQDVFSFLDKK---AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 RH +ID DV +L V TK DKL+ + + + + Sbjct: 121 ARHTNLEIDLDVDVYLKSFLRGDQQILKVFTKADKLNQSQKTKLKNDFENSL-------- 172 Query: 187 EVIPTSSVKRKGIEVLRKAILET 209 S++ + G+ +L ILE Sbjct: 173 ---LISNLNKSGLTLLENIILEK 192 >gi|317031302|ref|XP_001393150.2| GTP-binding protein (EngB) [Aspergillus niger CBS 513.88] Length = 327 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 36/232 (15%) Query: 8 TKSAWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ + + L + + P + PE+AF GRSNVGKSSL+N L+ ++ + TS+ PGRTQ Sbjct: 79 SRHSPVKLWTLSKFRTTPLSSTTPEVAFLGRSNVGKSSLLNALMGQE-ICWTSSKPGRTQ 137 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F K + L+DMPGYG + WG I++YL R LR ++ Sbjct: 138 TMNAFGIG---GTKGGESKVVLLDMPGYGKGSRSE-----WGAEIMKYLKNRKQLRRTFI 189 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID--------KLSPTTAQETLEKTKYLI 178 LID +HG+K D+ + A+ +QI+++K+D +L+ +E L +T+ I Sbjct: 190 LIDGQHGIKHSDEGILELFRHYAIPHQIIVSKVDNIMAARTSQLATGVTEERLLQTQKKI 249 Query: 179 RNY------------PTAHPEVIPTSSV------KRKGIEVLRKAILETINY 212 + P A E++ SS GI +R AIL Y Sbjct: 250 QELRPIIQPVGRDEGPGALGEILTCSSKVLRTPGNYLGISPIRWAILSAAGY 301 >gi|134077679|emb|CAK45719.1| unnamed protein product [Aspergillus niger] Length = 404 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 36/232 (15%) Query: 8 TKSAWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ + + L + + P + PE+AF GRSNVGKSSL+N L+ ++ + TS+ PGRTQ Sbjct: 79 SRHSPVKLWTLSKFRTTPLSSTTPEVAFLGRSNVGKSSLLNALMGQE-ICWTSSKPGRTQ 137 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F K + L+DMPGYG + WG I++YL R LR ++ Sbjct: 138 TMNAFGIG---GTKGGESKVVLLDMPGYGKGSRSE-----WGAEIMKYLKNRKQLRRTFI 189 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID--------KLSPTTAQETLEKTKYLI 178 LID +HG+K D+ + A+ +QI+++K+D +L+ +E L +T+ I Sbjct: 190 LIDGQHGIKHSDEGILELFRHYAIPHQIIVSKVDNIMAARTSQLATGVTEERLLQTQKKI 249 Query: 179 RNY------------PTAHPEVIPTSSV------KRKGIEVLRKAILETINY 212 + P A E++ SS GI +R AIL Y Sbjct: 250 QELRPIIQPVGRDEGPGALGEILTCSSKVLRTPGNYLGISPIRWAILSAAGY 301 >gi|94676499|ref|YP_588584.1| GTP-binding protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|119368791|sp|Q1LTY0|ENGB_BAUCH RecName: Full=Probable GTP-binding protein EngB gi|94219649|gb|ABF13808.1| GTP-binding protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 202 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 12/209 (5%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 M+ + K+ ++F I L EIAF+G SNVGKSS+IN L N+KNLARTS Sbjct: 1 MIHKYDYHKTHFLFSTSC--IKNLLYNVSKEIAFTGSSNVGKSSVINTLTNQKNLARTSK 58 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG T+ +N F P + L+D+PGYGY P W ++ +L + + Sbjct: 59 KPGSTKTVNVFEV---------EPGVNLIDLPGYGYVTMPVALKYHWQHDLIYFLQKCTN 109 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ + +L+D RH +K +D+ + + + I+L K DK++ + + N Sbjct: 110 LKGLVVLMDIRHPMKFLDKYIIQCAIENKIQVFILLNKADKMNAYACNTQYHTVQQHLSN 169 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILET 209 ++ ++ SSV + GI+ L+ + Sbjct: 170 L-ESNIKITLFSSVTKLGIKKLKAQLDSW 197 >gi|242279364|ref|YP_002991493.1| ribosome biogenesis GTP-binding protein YsxC [Desulfovibrio salexigens DSM 2638] gi|259645890|sp|C6BUE5|ENGB_DESAD RecName: Full=Probable GTP-binding protein EngB gi|242122258|gb|ACS79954.1| GTP-binding protein HSR1-related [Desulfovibrio salexigens DSM 2638] Length = 201 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 14/197 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + ++ V EI L + P+I +GRSNVGKSSLIN L +RK LA+ S+ PG+T+ LN Sbjct: 3 NTLTLIKTVYEINQLEEIAAPQIILAGRSNVGKSSLINCLASRKKLAKISSTPGKTRSLN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 ++ + +VD+PGYGYAR K W LI +YL + + + +L+D Sbjct: 63 YYEV--------SPHGYYIVDLPGYGYARCSKTERAKWAKLIDKYLLDNAYVAAAAVLLD 114 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 RH +Q D D+ S+ + ++TK DK + +K + +++ P I Sbjct: 115 SRHNPQQNDLDLISYFKHCNIPIIPIMTKSDKTKQKDRSKVQKKWEDILKVKP------I 168 Query: 190 PTSSVKRKGIEVLRKAI 206 SS L + Sbjct: 169 CVSSKTGMNRTRLWNLL 185 >gi|223997822|ref|XP_002288584.1| GTP binding protein [Thalassiosira pseudonana CCMP1335] gi|220975692|gb|EED94020.1| GTP binding protein [Thalassiosira pseudonana CCMP1335] Length = 483 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 90/204 (44%), Gaps = 11/204 (5%) Query: 15 LRGVPEIGLLPKA-GPPEIAFSGRSNVGKSSLINILVNRKN--LARTSNAPGRTQHLNFF 71 L G LP + G PE+AF GRSNVGKSSL+N LV++ AR PG T +N + Sbjct: 149 LVGAYLDKQLPPSLGVPEVAFLGRSNVGKSSLLNRLVSKAGGETARVGKTPGATASVNLY 208 Query: 72 VP-----KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 P + D+PG+GYA+ K+ +S RYL +R L L Sbjct: 209 ALLGPSKSRDKGGGQGKPILGFADLPGFGYAKLNKETKESVEEAAERYLGKRRELALGIL 268 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 L+D R D+ V + L V +V TK DKL + + + P P Sbjct: 269 LVDSRRIPNTDDRAVLAALFDMGVPLIVVATKSDKLKANEVDTAMASIRDGLG-LPEGQP 327 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 + S V + ++ L + IL+ Sbjct: 328 --LRVSGVTGENVKELWRIILDAC 349 >gi|225683955|gb|EEH22239.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03] Length = 303 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 44/243 (18%) Query: 3 SHTIF--TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 + + F +K + I + E +P + PE+ F GRSNVGKSSL+N L+++ ++ TS+ Sbjct: 64 AESFFKSSKHSPIQMWTASEFRTIPMSNVPEVVFLGRSNVGKSSLLNALMDQ-DVCYTSS 122 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 GRT +N + K + LVD PGYG + WG I++YL++R Sbjct: 123 KIGRTHTINAYGVG---GRKAGEAQVVLVDTPGYGKGS-----HEEWGKEIIKYLTKRKQ 174 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID---------KLSPTTAQETL 171 LR ++LID HG+K D+D+FS L A+ +Q++L+K D ++ + Sbjct: 175 LRRTFVLIDSHHGLKPGDRDIFSLLRSTAIPHQVILSKADSVLVKGNSKRIPRGITDAKI 234 Query: 172 EKTKYLIRNYPT------------------AHPEVIPTSS------VKRKGIEVLRKAIL 207 +K L A E+I S+ GI +R A+L Sbjct: 235 QKLASLAERTLHKVQPDRDVGKGGVELGVPALGEIIACSARVTNEYESYLGINAIRWAVL 294 Query: 208 ETI 210 I Sbjct: 295 RAI 297 >gi|68076099|ref|XP_679969.1| GTP-binding protein [Plasmodium berghei strain ANKA] gi|56500827|emb|CAH99774.1| GTP-binding protein, putative [Plasmodium berghei] Length = 264 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 33/213 (15%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 I P+I GRSNVGKSSLIN L+N + +A+ S PGRT+HL + Sbjct: 48 AQTIHKYKPLDIPQIGIFGRSNVGKSSLINALMNYREVAQASKTPGRTRHLFIY------ 101 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N L +++VD+PGYG+A+ K D+W LI YL++ L+ LI+C Sbjct: 102 ---NLLNHISVVDLPGYGFAKVSKNLRDNWSILIEEYLNKAKNLKRALCLIECTELFTPY 158 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY---------------- 181 D + L K + +QI++TKIDKL + K +I NY Sbjct: 159 DYVLLDMLIMKNIPFQIIVTKIDKLKAEELHHAMVKIISIIENYKKKVKAFNENKHKKNN 218 Query: 182 --------PTAHPEVIPTSSVKRKGIEVLRKAI 206 + + SS+KR GI+ LR + Sbjct: 219 SFKKENCEFNINEYLFNVSSLKRFGIQELRANL 251 >gi|312622795|ref|YP_004024408.1| ribosome biogenesis GTP-binding protein ysxc [Caldicellulosiruptor kronotskyensis 2002] gi|312203262|gb|ADQ46589.1| ribosome biogenesis GTP-binding protein YsxC [Caldicellulosiruptor kronotskyensis 2002] Length = 204 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 64/193 (33%), Positives = 95/193 (49%), Gaps = 13/193 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PE+ GRSNVGKSS IN + + LA+ + PG+T+ +NFF Sbjct: 14 AVKKEDYPPIKMPEMCICGRSNVGKSSFINAVF-KDKLAKVGSTPGKTRTINFF------ 66 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD+PGYGYA+ K+ W +I YL ER L+ LL+D RH + Sbjct: 67 ---NIDNKFRVVDLPGYGYAKVSKEEKRRWKSMIEEYLLEREELKLSVLLLDSRHIPTED 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + SF DKK + IVLTK DKLS + E + + S+ Sbjct: 124 DKIMLSFFDKKEIPIMIVLTKCDKLSNNELTKNTELISKELGIEKELFYQ---FSAKSGM 180 Query: 198 GIEVLRKAILETI 210 G++ ++ AI++ + Sbjct: 181 GVKQVQYAIIKFM 193 >gi|315453174|ref|YP_004073444.1| putative GTP-binding protein Engb [Helicobacter felis ATCC 49179] gi|315132226|emb|CBY82854.1| probable GTP-binding protein Engb [Helicobacter felis ATCC 49179] Length = 205 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 5/163 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FLR + P A PE+ F GRSNVGKS+LIN ++ RK LA++S PG+TQ NFF Sbjct: 11 FLRSAYNLAQCPPACMPEVVFVGRSNVGKSTLINTILERK-LAKSSATPGKTQAANFFCT 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + + +D+PG+GYA+ K+ W + L +RS+++ + LID RH Sbjct: 70 R-WQIPPAKILDFICIDLPGFGYAKVSKEIKGQWAVFLSDLLIQRSSIKLILHLIDARHP 128 Query: 134 VKQIDQDVFSFLDKKAVSYQI---VLTKIDKLSPTTAQETLEK 173 +D +V FL+ Q V TK DKLS ++ Sbjct: 129 HLPLDVEVRGFLESVLRPDQTLKRVYTKFDKLSKNAQHTLYQQ 171 >gi|213421719|ref|ZP_03354785.1| GTPase EngB [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 119 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 9/126 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 E+AF+GRSN GKSS +N L N+K+LARTS PGRTQ +N F D L Sbjct: 3 GIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVVDGK---------RL 53 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGYA P++ W + YL +R +L+ + +L+D RH +K +DQ + + + Sbjct: 54 VDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIQWAVES 113 Query: 149 AVSYQI 154 + + Sbjct: 114 NIQVLV 119 >gi|296415306|ref|XP_002837331.1| hypothetical protein [Tuber melanosporum Mel28] gi|295633195|emb|CAZ81522.1| unnamed protein product [Tuber melanosporum] Length = 337 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 32/219 (14%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 FT+ + + + PE+AF GRSNVGKSSL+N L++ K LA TS+ PGRT Sbjct: 74 FFTRRQPRHMWSASKFKEICFGTAPEVAFLGRSNVGKSSLLNALLD-KPLAHTSSKPGRT 132 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 + LN + + L+DMPGYG + D WG +++YL R LR + Sbjct: 133 RLLNAYSIANGRG--------VLLDMPGYG-----HNSRDEWGVQVMKYLQRRRELRRAF 179 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR------ 179 LL+D HG K D+ + + V++Q+VL+K+D+L P L + + ++ Sbjct: 180 LLVDAEHGFKGFDRLMVRTFAEHGVAFQVVLSKVDRLRPEELVGRLVQARAVLEGDDREG 239 Query: 180 ------NYPTAHPEVIPTSSV------KRKGIEVLRKAI 206 E+I T++ KR GI LR +I Sbjct: 240 EDRRAAKVSCGLGEIIGTAASPAKKRNKRVGINELRWSI 278 >gi|167973106|ref|ZP_02555383.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|167974818|ref|ZP_02557095.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|167976019|ref|ZP_02558296.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|167988518|ref|ZP_02570189.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|168361987|ref|ZP_02695166.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195867678|ref|ZP_03079680.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273611|ref|ZP_03206146.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554309|ref|YP_002284666.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550577|ref|ZP_03771526.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551103|ref|ZP_03772049.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|238058989|sp|B5ZB76|ENGB_UREU1 RecName: Full=Probable GTP-binding protein EngB gi|171903533|gb|EDT49822.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209057|gb|EDU06100.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018849|gb|EDU56889.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997724|gb|EDU66821.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659574|gb|EDX52954.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660735|gb|EDX53990.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249639|gb|EDY74420.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541810|gb|ACI60039.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378918|gb|EEH01283.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379731|gb|EEH02093.1| ATP/GTP-binding protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 208 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 15/197 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P EI GRSNVGKSSLIN L N K +ARTSN PGRTQ +NFF Sbjct: 4 FIKSAQYFDQYPVDKQFEICVIGRSNVGKSSLINALANEK-IARTSNTPGRTQLVNFF-- 60 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + LVD+PGYG+AR K +I +YL R L V+ + D Sbjct: 61 --------DFNSFRLVDLPGYGFARVSKDKQLDLATIIDQYLGYRQNLCAVFQICDINV- 111 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ + + + ++ +VL K+DK++ + +K + + ++ S+ Sbjct: 112 LTNDDVEMSRYFENQNYAHFVVLNKVDKVNKSHFDNNKQKIAKFLN---ISVDRLLCVSA 168 Query: 194 VKRKGIEVLRKAILETI 210 K + L + + + Sbjct: 169 QKNTNVATLFALMKKVV 185 >gi|305433183|ref|ZP_07402339.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter coli JV20] gi|304443884|gb|EFM36541.1| ribosome biogenesis GTP-binding protein YsxC [Campylobacter coli JV20] Length = 196 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 17/205 (8%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +K LA++S PG+TQ +N Sbjct: 4 SAKFITSLDKFDKNFASHFSEVAFLGRSNVGKSSLINSLCKQKKLAKSSATPGKTQLINI 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + ++ +D+PG+GYA+ K + W + +L RS+++ LID Sbjct: 64 FEV--LCKKDEDKFSIHFIDLPGFGYAKVSKNLKEIWNKNLDEFLKLRSSIKLFVHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 RH ID ++ +L V TK DKL+ + + K Sbjct: 122 RHTNLDIDLNLDKYLKSFLKPDQRVLKVFTKCDKLNQSEKAKLKNSFKDA---------- 171 Query: 188 VIPTSSVKRKGIEVLR-KAILETIN 211 I S++ + G++ L + I +T+ Sbjct: 172 -ILISNLNKMGLDDLEHEVIKQTLG 195 >gi|85057291|ref|YP_456207.1| GTPase EngB [Aster yellows witches'-broom phytoplasma AYWB] gi|84789396|gb|ABC65128.1| GTP-binding protein [Aster yellows witches'-broom phytoplasma AYWB] Length = 196 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 13/202 (6%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 F+ + +P PEI GRSNVGKS+ IN L +K LA+ S PG+T LN Sbjct: 3 KKSTFVSSIVNFKYIPLKKQPEIVLVGRSNVGKSTFINALTQKKKLAKISKTPGKTITLN 62 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 ++ + + L+D PGYGYA+ K+ +I+ +L + S L+ ++ LID Sbjct: 63 YYDINE---------SFYLIDTPGYGYAKKSKEIKKQLLPMIIAFLEQTSNLKAIFQLID 113 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 + G Q D + L + ++ K DK+ + + L+ ++ N+ + Sbjct: 114 FKVGATQEDDRIHQVLLQAGFEVVLLFVKKDKVKKSLVPKQLK----MLVNHFSQIKYFF 169 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 SS +++G+E L+ + + ++ Sbjct: 170 LISSKQQEGLEELKLFLSQLMD 191 >gi|255660429|ref|ZP_05405838.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma genitalium G37] Length = 176 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 62/166 (37%), Positives = 90/166 (54%), Gaps = 12/166 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ ++ P+ PEI F GRSNVGKSSLIN +K LA+TS PGRTQ LN+F Sbjct: 5 FLKSASDLKDCPQDNIPEICFMGRSNVGKSSLINAFF-KKKLAKTSATPGRTQLLNYFEY 63 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 KD VD+PGYG+A+ K D L+ ++L+ RS L V L++D Sbjct: 64 KDK----------RFVDLPGYGFAKINKNKKDFITNLLTQFLNFRSNLVGVVLIVDSGV- 112 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 V DQ+V + + +++ IV K DKL+ + +L+ ++ Sbjct: 113 VTVQDQEVVKIILQTGLNFLIVANKFDKLNQSERYFSLKNIANFLK 158 >gi|325096396|gb|EGC49706.1| GTPase EngB [Ajellomyces capsulatus H88] Length = 361 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 15/190 (7%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + + I + E +P + PE+ F GRSNVGKSSL+N ++ K L TS+ GRT+ Sbjct: 71 SNHSPIQMWTASEFRTIPMSDVPEVVFLGRSNVGKSSLLNAIM-EKGLCFTSSKVGRTRT 129 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LN + K+ + LVD PGYG + WG +I++YL++R LR ++L Sbjct: 130 LNAYGIG---GRKDGEAKVVLVDTPGYGKGS-----HEEWGEVIMKYLTKRRQLRRTFVL 181 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID----K--LSPTTAQETLEKTKYLIRNY 181 +D HG+K D + S L AV +Q++L+K D K L E+ K L R Sbjct: 182 LDSHHGIKPADAAILSLLRSAAVPHQVILSKADSVLIKGGLKKGARGLRPERIKELGRFA 241 Query: 182 PTAHPEVIPT 191 +V P Sbjct: 242 GGIRAKVQPV 251 >gi|229087034|ref|ZP_04219188.1| GTP-binding protein YihA [Bacillus cereus Rock3-44] gi|228696297|gb|EEL49128.1| GTP-binding protein YihA [Bacillus cereus Rock3-44] Length = 149 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 51/151 (33%), Positives = 71/151 (47%), Gaps = 11/151 (7%) Query: 56 ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL 115 R S+ PG+TQ LNFF+ + M VD+PGYGYA+ K +WG +I Y Sbjct: 1 MRISSKPGKTQTLNFFLINEM---------MHFVDVPGYGYAKVSKTERAAWGKMIETYF 51 Query: 116 SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + R L L++D RH D ++ FL + I+ TK DK+ Q+ L+ K Sbjct: 52 TTREQLDAAVLVVDLRHPPTNDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVK 111 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + A EV+ SS G E KAI Sbjct: 112 ETLD--VEAGDEVVLFSSETGLGKEEAWKAI 140 >gi|28211962|ref|NP_782906.1| GTP-binding protein [Clostridium tetani E88] gi|28204405|gb|AAO36843.1| GTP-binding protein [Clostridium tetani E88] Length = 158 Score = 164 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 11/166 (6%) Query: 46 INILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVD 105 IN L NR+ L + S PG+T+ +NFF+ + VD+PGYGYAR K+ Sbjct: 2 INSLTNRRKLVKVSGKPGKTRLINFFLINN---------DFYFVDLPGYGYARVSKEEKK 52 Query: 106 SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT 165 +WG I YL++R L+ + LL+D RH D + +++ +V TK DKL + Sbjct: 53 NWGKTIETYLTDREQLKKIILLVDSRHKPTNDDVLMCNWIKYYGYDISVVATKSDKLKRS 112 Query: 166 TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++ + + + + ++I S++ + G E L + I +T N Sbjct: 113 ELKKNEKIIRDTLD--LSEEIKIIFHSTLNKSGREELLEDIFKTCN 156 >gi|240280534|gb|EER44038.1| GTP-binding protein [Ajellomyces capsulatus H143] Length = 361 Score = 164 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 15/190 (7%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + + I + E +P + PE+ F GRSNVGKSSL+N ++ K L TS+ GRT+ Sbjct: 71 SNHSPIQMWTASEFRTIPMSDVPEVVFLGRSNVGKSSLLNAIM-EKGLCFTSSKVGRTRT 129 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LN + K+ + LVD PGYG + WG +I++YL++R LR ++L Sbjct: 130 LNAYGIG---GRKDGEAKVVLVDTPGYGKGS-----HEEWGEVIMKYLTKRRQLRRTFVL 181 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID----K--LSPTTAQETLEKTKYLIRNY 181 +D HG+K D + S L AV +Q++L+K D K L E+ K L R Sbjct: 182 LDSHHGIKPADAAILSLLRSAAVPHQVILSKADSVLIKGGLKKGARGLRPERIKELGRFA 241 Query: 182 PTAHPEVIPT 191 +V P Sbjct: 242 GGICAKVQPV 251 >gi|218670936|ref|ZP_03520607.1| GTPase EngB [Rhizobium etli GR56] Length = 120 Score = 164 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 70/117 (59%), Positives = 84/117 (71%), Gaps = 1/117 (0%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 +F WIF+RGVP + LP GP E+AF+GRSNVGKSSLIN LV +K LARTSN P Sbjct: 5 EKPLF-GHPWIFIRGVPSLTFLPPEGPSEVAFAGRSNVGKSSLINALVGQKGLARTSNTP 63 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 GRTQ LN+FVP +S +LP MA+VDMPGYGYA+APK+ VD W L+ YL R+ Sbjct: 64 GRTQELNYFVPDGYSGEGGDLPPMAIVDMPGYGYAQAPKEQVDKWTKLVFDYLRGRA 120 >gi|32266828|ref|NP_860860.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter hepaticus ATCC 51449] gi|81665602|sp|Q7VGJ2|ENGB_HELHP RecName: Full=Probable GTP-binding protein EngB gi|32262880|gb|AAP77926.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 222 Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P EI F GRSNVGKS+LIN L+N K LA++S+ PG+TQ +NFF Sbjct: 9 FMSSASHLDNAPPPNASEIVFLGRSNVGKSTLINTLLN-KPLAKSSSTPGKTQLINFFA- 66 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 N + +D+PG+GYA+ K W ++ +L R +++ L+D RH Sbjct: 67 -SVWVWHNQRLPLTFIDLPGFGYAKVSKTIKKEWERHLLNFLFMRQSIKLFLHLVDARHT 125 Query: 134 VKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQET-----LEKTKYLIRNYPTAH 185 ID V + L++ Q +L TK DKL+ + ++K K + H Sbjct: 126 DLAIDTSVATMLEQICRGDQCILRIYTKADKLNQSALNALYKRVYIQKNKVQGVDTDDTH 185 Query: 186 PEVIPTSSVKRKGIE-----VLRKAILET 209 + + S++ + + LR+ I++ Sbjct: 186 TQSLLFSAISKNHRKMVSLTHLREEIVKY 214 >gi|221057083|ref|XP_002259679.1| GTP-binding protein [Plasmodium knowlesi strain H] gi|193809751|emb|CAQ40453.1| GTP-binding protein, putative [Plasmodium knowlesi strain H] Length = 280 Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 96/214 (44%), Gaps = 34/214 (15%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 I + P+IA GRSNVGKSSLIN L+N + +A+ S PGRT+HL F Sbjct: 64 AQTIHKYKPSAIPQIAIFGRSNVGKSSLINALLNNREVAQASRTPGRTRHLFIF------ 117 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N L +++VD+PGYG+A+ K D+W LI YL L+ LI+C Sbjct: 118 ---NLLNHLSIVDLPGYGFAKVSKDMRDNWSILIEEYLKRAVNLKRALCLIECTEFFTPH 174 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV--------- 188 D + L K V +QIV+TK+D+L + K +I +Y + Sbjct: 175 DFVLLDMLITKGVPFQIVVTKVDRLKAHELHTLMLKVLSVIDDYRKKVKSLNERMHRQGL 234 Query: 189 ----------------IPTSSVKRKGIEVLRKAI 206 SS+K G++ LR + Sbjct: 235 SIHKETTYDMKISTYLFNVSSLKNFGVQQLRAHL 268 >gi|240047222|ref|YP_002960610.1| putative GTP-binding protein engB [Mycoplasma conjunctivae HRC/581] gi|239984794|emb|CAT04770.1| Probable GTP-binding protein engB [Mycoplasma conjunctivae] Length = 183 Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 18/200 (9%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W F++ +IAF GRSNVGKSSLIN L +K +A+ S PGRTQ +N+F Sbjct: 2 WTFIKSASSRANWLIEEE-QIAFIGRSNVGKSSLINALAKQK-IAKVSKHPGRTQLINYF 59 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 +VD+PGYGYA+ ++ ++ E + L+ V+L+ID Sbjct: 60 KTDKNK---------IVVDLPGYGYAKISISQKMEISQMVNQFFQENNKLKAVFLIIDAF 110 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G +D + +L + +V KIDK + + + + + EVI T Sbjct: 111 VGFTNLDLQMLDYLKDLNIETILVANKIDKTNQSQRSKITNIINKM-------NYEVILT 163 Query: 192 SSVKRKGIEVLRKAILETIN 211 SS K+ G++ + I + +N Sbjct: 164 SSKKQTGLDKIDLKINQILN 183 >gi|269115169|ref|YP_003302932.1| putative GTP-binding protein engB [Mycoplasma hominis] gi|268322794|emb|CAX37529.1| Probable GTP-binding protein engB [Mycoplasma hominis ATCC 23114] Length = 183 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 93/194 (47%), Gaps = 15/194 (7%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL+ + + F GRSNVGKSSLIN L + N+A+TS+ PGRTQ +N+F Sbjct: 2 WKFLKSCKSHDDFINSDNIQYVFWGRSNVGKSSLINSLASC-NIAKTSSYPGRTQLINYF 60 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 ++D+PGYGYA+ KK D +I Y + V LLID + Sbjct: 61 ESNKNK---------IIIDLPGYGYAKISKKLQDKISFMIDFYFKNDKNNKKVLLLIDAK 111 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G D ++ +L+ + + IV+TKIDK + + + L + Sbjct: 112 IGFSASDLEIIEYLNDLKIKFDIVVTKIDKANQSQRYCVKNQALSL-----KTVENIFLV 166 Query: 192 SSVKRKGIEVLRKA 205 SS K++GIE + + Sbjct: 167 SSEKKQGIEEIMQF 180 >gi|238809710|dbj|BAH69500.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 195 Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 11/200 (5%) Query: 12 WIFLRGVPEIGL-LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 W F+ + L ++ F GRSNVGKSSL+N + N+ N++ S PGRTQ +N+ Sbjct: 3 WKFITSAIDKKQWLDCKNSFQVCFWGRSNVGKSSLLNAITNQ-NISFVSKHPGRTQLINY 61 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + +VD+PGYGYA K+ V + +L + + ++LLID Sbjct: 62 FA---------DNNDKYIVDLPGYGYAEISKEKVIKMNLAVKDFLKNEPSPKHIFLLIDS 112 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + D + +FL+ +Y IV TKIDKL+ ++K L +V Sbjct: 113 RTRFTKNDLETLTFLNSLNWNYDIVYTKIDKLNQKEKSALIKKHNELNSKIFKKSAQVFL 172 Query: 191 TSSVKRKGIEVLRKAILETI 210 SS K ++ + + I + + Sbjct: 173 VSSQKNINLDDIVQHIEKLL 192 >gi|225560909|gb|EEH09190.1| GTP-binding protein [Ajellomyces capsulatus G186AR] Length = 362 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 15/190 (7%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + + I + E +P + PE+ F GRSNVGKSSL+N ++ K L TS+ GRT+ Sbjct: 71 SNHSPIQMWTASEFRTIPMSDVPEVVFLGRSNVGKSSLLNAIM-EKGLCFTSSKVGRTRT 129 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LN + K+ + LVD PGYG + WG +I++YL++R LR ++L Sbjct: 130 LNAYGIG---GRKDGEAKVVLVDTPGYGKGS-----HEEWGEVIMKYLTKRRQLRRTFVL 181 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID----K--LSPTTAQETLEKTKYLIRNY 181 +D HG+K D + S L AV +Q++L+K D K L E+ + L R Sbjct: 182 LDSHHGIKPADAAILSLLRSAAVPHQVILSKADSVLIKGGLKKGARGLRPERIEELGRFA 241 Query: 182 PTAHPEVIPT 191 +V P Sbjct: 242 GGIRAKVQPV 251 >gi|146296520|ref|YP_001180291.1| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410096|gb|ABP67100.1| small GTP-binding protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 204 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 13/193 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P PE+ GRSNVGKSS IN + + LA+ + PG+T+ +NFF Sbjct: 14 AVKKDDYPPIKMPEMCICGRSNVGKSSFINTIF-KDKLAKVGSTPGKTRTINFF------ 66 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD+PGYGYA+ K+ W +I YL ER L+ LL+D RH + Sbjct: 67 ---NIDNKFRVVDLPGYGYAQVSKEEKKRWKDMIEEYLLEREELKLAVLLLDSRHLPTED 123 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ + F DKK + IVLTK DKLS + E + + S+ Sbjct: 124 DKIMLGFFDKKEIPIMIVLTKCDKLSNNELTKNTELISKELGIEKDLFYQ---FSAKTGI 180 Query: 198 GIEVLRKAILETI 210 G + ++ +I++ + Sbjct: 181 GAKQIQYSIVKFM 193 >gi|228993210|ref|ZP_04153131.1| GTP-binding protein YihA [Bacillus pseudomycoides DSM 12442] gi|228766536|gb|EEM15178.1| GTP-binding protein YihA [Bacillus pseudomycoides DSM 12442] Length = 149 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 11/151 (7%) Query: 56 ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL 115 R S+ PG+TQ LNFF+ + M VD+PGYGYA+ K +WG +I Y Sbjct: 1 MRISSKPGKTQTLNFFLINEM---------MHFVDVPGYGYAKVSKTERAAWGRMIETYF 51 Query: 116 SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + R L L++D RH D ++ FL + I+ TK DK+ Q+ L+ K Sbjct: 52 TTREQLDAAVLVVDLRHPPTNDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVK 111 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + EV+ SS G E KAI Sbjct: 112 ETLDI--EQGDEVVLFSSETGLGKEEAWKAI 140 >gi|308189736|ref|YP_003922667.1| GTP-binding protein [Mycoplasma fermentans JER] gi|307624478|gb|ADN68783.1| GTP-binding protein [Mycoplasma fermentans JER] Length = 194 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 11/200 (5%) Query: 12 WIFLRGVPEIGL-LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 W F+ + L ++ F GRSNVGKSSL+N + N+ N++ S PGRTQ +N+ Sbjct: 2 WKFITSAIDKKQWLDCKNSFQVCFWGRSNVGKSSLLNAITNQ-NISFVSKHPGRTQLINY 60 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + +VD+PGYGYA K+ + + +L + + ++LLID Sbjct: 61 FA---------DNNDKYIVDLPGYGYAEISKEKIIKMNLAVKDFLKNEPSPKHIFLLIDS 111 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + D + +FL+ +Y IV TKIDKL+ ++K L +V Sbjct: 112 RTRFTKNDLETLTFLNSLNWNYDIVYTKIDKLNQKEKSALIKKHNELNSKIFKKSAQVFL 171 Query: 191 TSSVKRKGIEVLRKAILETI 210 SS K ++ + + I + + Sbjct: 172 VSSQKNINLDDIVQHIEKLL 191 >gi|295664617|ref|XP_002792860.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] gi|226278381|gb|EEH33947.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01] Length = 319 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 17/196 (8%) Query: 3 SHTIF--TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 + T F +K + I + E +P + PE+ F GRSNVGKSSL+N L+ R ++ TS+ Sbjct: 55 AETFFKSSKHSPIQMWTASEFRTIPMSNVPEVVFLGRSNVGKSSLLNALMER-DVCYTSS 113 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 GRT LN + K+ + LVD PGYG + WG I++YL++R Sbjct: 114 KLGRTHTLNAYGVG---GRKDGEARVVLVDTPGYGKGSN-----EKWGEEIIKYLTKRKQ 165 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL------SPTTAQETLEKT 174 LR ++L+D HG+K D+DVFS L A+ +Q++L+K D + T K Sbjct: 166 LRRTFVLVDSHHGIKPGDRDVFSLLRSAAIPHQVILSKADSVLVKGNSKRVPRGITEAKV 225 Query: 175 KYLIRNYPTAHPEVIP 190 + L +V P Sbjct: 226 RKLASFAERILSKVQP 241 >gi|219117025|ref|XP_002179307.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409198|gb|EEC49130.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 199 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 95/206 (46%), Gaps = 14/206 (6%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLI-------NILVNRKNLARTSNAPGR 64 FL + L P+ G PEIAF GRSNVGKSSL+ L + AR PG Sbjct: 1 MQFLGSFLDKQLPPRIGVPEIAFLGRSNVGKSSLLNRLSSSARQLPTHNDQARVGKTPGA 60 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 T +N + D + + VD+PG+GYA+ K+ +S YL+ R L Sbjct: 61 TASVNLYALLDAKESQI----LGWVDLPGFGYAKLSKQVKESVQETAENYLARRQELVLG 116 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 LL+D R D+ V + L + +V TK+DKL+P + L + + + P Sbjct: 117 ILLVDARRIPSNDDRAVLAALFDMGIPVVVVATKVDKLNPNELRSGLAEIRDGLG-LPDG 175 Query: 185 HPEVIPTSSVKRKGIEVLRKAILETI 210 P +P SSV +G L + ILE Sbjct: 176 QP--LPVSSVTGEGTRDLWRIILEAC 199 >gi|154277838|ref|XP_001539752.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150413337|gb|EDN08720.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 361 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 15/190 (7%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + + I + E +P + PE+ F GRSNVGKSSL+N ++ K L TS+ GRT+ Sbjct: 71 SNHSPIQMWTASEFRTIPMSDVPEVVFLGRSNVGKSSLLNAIM-EKGLCFTSSKVGRTRT 129 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LN + K+ + LVD PGYG + WG +I++YL++R LR ++L Sbjct: 130 LNAYGIG---GRKDGEARVVLVDTPGYGKGS-----HEEWGEVIMKYLTKRRQLRRTFVL 181 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID----K--LSPTTAQETLEKTKYLIRNY 181 +D HG+K D + S L AV +Q++L+K+D K L E+ + L R Sbjct: 182 LDSHHGIKPADAAILSLLRSAAVPHQVILSKVDSVLIKGGLKKGARGLRPERIEELGRFA 241 Query: 182 PTAHPEVIPT 191 +V P Sbjct: 242 GGIRAKVQPV 251 >gi|312220493|emb|CBY00434.1| hypothetical protein [Leptosphaeria maculans] Length = 455 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 51/255 (20%) Query: 1 MVSHTIFTKS--AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVN---RKNL 55 ++++ FT LR V + + P++ PE+AF GRSNVGKSSL+N +V + L Sbjct: 190 VLANRFFTNHGKDATLLRSVAQFRMFPESDVPEVAFVGRSNVGKSSLLNAVVGADVKSLL 249 Query: 56 ARTSNAPGRTQHLNFFVPK-----------DFSNLKNNLPAMALVDMPGYGYARAPKKNV 104 ARTS+ PG T+ +N + D + + +VDMPGYG + ++ Sbjct: 250 ARTSSTPGFTKTMNLYGVGSGNGIVLKKQPDGRDKIIGRSGLVIVDMPGYG-----EGSL 304 Query: 105 DSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL-- 162 SWG I++Y+ R LR V++L+D +HG+K D+ + + L VS+Q++L+K+DK+ Sbjct: 305 SSWGVEIMKYIQSRKQLRRVFVLLDAQHGIKDKDRSLLATLRLTGVSHQVILSKLDKIYI 364 Query: 163 --------------SPTTAQETLEKTKYLIRNY---------PTAHPEVIPTSSV----- 194 + TL+ + + A E++ S+ Sbjct: 365 PKAKEIKHFNGKSVGKLKPKGTLQGLREAMEKLKVDIKPPVGGGALGEILGCSAETVVDG 424 Query: 195 KRKGIEVLRKAILET 209 KR GI+ +R A+L+ Sbjct: 425 KRLGIDHVRYAVLKA 439 >gi|156368085|ref|XP_001627527.1| predicted protein [Nematostella vectensis] gi|156214439|gb|EDO35427.1| predicted protein [Nematostella vectensis] Length = 259 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 62/179 (34%), Positives = 87/179 (48%), Gaps = 17/179 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PEIA GR++VGKSSLIN L+N+K LARTS PG T+H+N F N + Sbjct: 89 LPEIALVGRTSVGKSSLINALLNQKKLARTSKRPGHTRHINLF---------NVGSRFHI 139 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYGY + + R L+ V LLID G+K D L++ Sbjct: 140 VDLPGYGYVERVGPVREFQNWVCYR-------LKSVCLLIDGEVGIKINDLVAIEMLEEF 192 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTSSVKRKGIEVLRKAI 206 ++IVLTK+DK+S + + + +P V P S + G+ LR + Sbjct: 193 NTPFEIVLTKMDKVSKDSWMLVASNIQQRVDKLSNICYPHVFPISVKDKTGLSELRYFL 251 >gi|251772780|gb|EES53342.1| GTP-binding protein, HSR1-related [Leptospirillum ferrodiazotrophum] Length = 213 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 83/203 (40%), Gaps = 11/203 (5%) Query: 11 AWIFLRGVPEIGLLPKAG-PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + F+ V + +P AG P I +GRSNVGKSSLIN L LART PG T N Sbjct: 14 SATFVLSVADPRQMPPAGEGPIIGLAGRSNVGKSSLINRLTEHGGLARTGKRPGATTLPN 73 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 + +D PGYGY + S R + R +R V LL+D Sbjct: 74 LYRIH---------TGGYFLDFPGYGYMNRGQSTKASSQDASTRIVEARPDIRRVLLLVD 124 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAHPEV 188 R + +D + + ++ IV+TK D LS + L I Sbjct: 125 ARRELLPLDTEAARWFRLMSIPVSIVVTKTDTLSRNSRSLPLRAWGQWIGEAEDEGLGGP 184 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 P S+ +G+ L + + E + Sbjct: 185 FPVSARTGEGLLDLVRHVREVLG 207 >gi|229158086|ref|ZP_04286156.1| GTP-binding protein YihA [Bacillus cereus ATCC 4342] gi|228625405|gb|EEK82162.1| GTP-binding protein YihA [Bacillus cereus ATCC 4342] Length = 165 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 11/151 (7%) Query: 56 ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL 115 R S+ PG+TQ LNFF+ + M VD+PGYGYA+ K +WG +I Y Sbjct: 1 MRISSKPGKTQTLNFFLINEM---------MHFVDVPGYGYAKVSKTERAAWGKMIETYF 51 Query: 116 SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + R L L++D RH D ++ FL + I+ TK DK+ Q+ L+ K Sbjct: 52 TTREQLDAAVLVVDLRHKPTNDDVMMYDFLKHYDIPTIIIATKADKIPKGKWQKHLKVVK 111 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + EV+ SS G E KAI Sbjct: 112 ETLDI--ESGDEVVLFSSETGLGKEEAWKAI 140 >gi|163785786|ref|ZP_02180281.1| Predicted GTPase [Hydrogenivirga sp. 128-5-R1-1] gi|159878946|gb|EDP72955.1| Predicted GTPase [Hydrogenivirga sp. 128-5-R1-1] Length = 156 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%) Query: 45 LINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNV 104 LIN L NRK +A+ S PG+T+ +NFF D VD+PGYGYA KK Sbjct: 1 LINALFNRK-IAKVSATPGKTRLVNFFNVDD---------KFYFVDLPGYGYAAVSKKER 50 Query: 105 DSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 + W ++ Y + R L V LL+D RH +D + +L+ + Y +V TK+DKL+ Sbjct: 51 NQWQKMMNAYFNSRDNLNLVILLVDSRHKPTNLDFLMKEYLEALEIPYIVVGTKLDKLNQ 110 Query: 165 TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + + K + + +I TS+ ++ ++ + IL + Sbjct: 111 SEKAKAKKVIKETLE--LDDNVPIILTSAKEKINLDKVMSEILNAV 154 >gi|169606740|ref|XP_001796790.1| hypothetical protein SNOG_06418 [Phaeosphaeria nodorum SN15] gi|160707069|gb|EAT86249.2| hypothetical protein SNOG_06418 [Phaeosphaeria nodorum SN15] Length = 1169 Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 49/248 (19%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVN---RKNLARTSNAPGR 64 +++ LR + +P++ PE+AF GRSNVGKSSL+N +V+ + LARTS G Sbjct: 43 SQNRPTLLRSIANFREVPESDVPEVAFVGRSNVGKSSLLNAIVDANVKDLLARTSATRGF 102 Query: 65 TQHLNFFVPKDFSNL----------KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRY 114 T+ +NF+ + + K P + +VDMPGYG + ++ SWG I++Y Sbjct: 103 TKTMNFYGIGPETGVSLKKDKNGRDKIAGPGLVIVDMPGYG-----EGSLASWGIEIMKY 157 Query: 115 LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL------------ 162 + R LR V++L+D HG+K D+ + + L VS+Q++L+K+DKL Sbjct: 158 IQSRKQLRRVFVLLDAEHGIKDKDRSLLASLRLAGVSHQVILSKLDKLYIPPGRFATENQ 217 Query: 163 ----SPTTAQETLEKTKYLIRNY---------PTAHPEVIPTSSV-----KRKGIEVLR- 203 + TLE + ++ + A E++ SS KR G++ +R Sbjct: 218 HKQRPNPKPKGTLEAVRKMMEDLKPIINPPVGGGALGEILACSSETMVDSKRLGLDHVRD 277 Query: 204 KAILETIN 211 IL ++ Sbjct: 278 DFILSLVH 285 >gi|296004532|ref|XP_002808687.1| GTP binding protein, putative [Plasmodium falciparum 3D7] gi|225631672|emb|CAX63958.1| GTP binding protein, putative [Plasmodium falciparum 3D7] Length = 286 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 99/215 (46%), Gaps = 35/215 (16%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 I A P+IA GRSNVGKSSLIN L+N + +++ SN PGRT+HL F Sbjct: 65 AQTIHKYKPANIPQIAIFGRSNVGKSSLINALLNYREVSQASNTPGRTRHLFIF------ 118 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N L +++VD+PGYGYA+ K+ ++W LI YL+ L+ LI+ Sbjct: 119 ---NLLNYLSIVDLPGYGYAKVSKELRNNWSILIEEYLNRAKNLKRALCLIESTESFSTY 175 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY---------------- 181 D + L K + +QI++TKIDKL + K +I NY Sbjct: 176 DFILLDMLITKNIPFQIIITKIDKLKVNELHNLMIKILSVIDNYKKKVKVYNDNKHKNKN 235 Query: 182 ----------PTAHPEVIPTSSVKRKGIEVLRKAI 206 + + SS+K GI+ LR I Sbjct: 236 YNNVNYEICDFNINEYIHNVSSLKYFGIQELRANI 270 >gi|183219980|ref|YP_001837976.1| ribosome biogenesis GTP-binding protein YsxC [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910104|ref|YP_001961659.1| ribosome biogenesis GTP-binding protein YsxC [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|254783202|sp|B0SC16|ENGB_LEPBA RecName: Full=Probable GTP-binding protein EngB gi|254783203|sp|B0SJA9|ENGB_LEPBP RecName: Full=Probable GTP-binding protein EngB gi|167774780|gb|ABZ93081.1| GTPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778402|gb|ABZ96700.1| Putative GTP-binding protein EngB [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 213 Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 11/203 (5%) Query: 10 SAWIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 F + ++ IAF GRSN GKSSL+N L N + LA+ S PG+T+ + Sbjct: 11 PETKFFTSIAKLDEKEDLDSVQSIAFMGRSNSGKSSLLNALSNHRGLAKVSRTPGKTKLI 70 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 N F K LVD+PG+GY++A K L+ +L+ L+ +++L Sbjct: 71 NIFRTK---------VGFNLVDLPGFGYSKASHKEHKDMMNLLEGFLNSWKQLKILFILC 121 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 D + + + +K + ++ TKIDKL+ + + + + + V Sbjct: 122 DSQRDFPEEELSTIEVAMEKKIKPVVIRTKIDKLNQSGQHKVRTEMEAAMNEIGIPF-RV 180 Query: 189 IPTSSVKRKGIEVLRKAILETIN 211 S+ +GI LR+ ILET+ Sbjct: 181 FYISASTGRGIGELREFILETLG 203 >gi|71029450|ref|XP_764368.1| hypothetical protein [Theileria parva strain Muguga] gi|68351322|gb|EAN32085.1| hypothetical protein TP04_0732 [Theileria parva] Length = 365 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 15/209 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILV-------NRKNLARTSNAP 62 S F+ +LP G PEI GRSNVGKSS IN L+ + ++A S P Sbjct: 139 STLNFIGSYLHTTMLPSLGLPEICLVGRSNVGKSSFINSLMSYIKNKSRKCDMAFVSKTP 198 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA-PKKNVDSWGGLIVRYLSERSTL 121 G T+ +N F D + ++LVD+PGYG+ + + ++ YL R L Sbjct: 199 GYTKSINIFEAVDS----RDRGVLSLVDLPGYGHTEVKNAETRKNMQSIMKAYLKRRHEL 254 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V L+D + D +V + + + + +LTK+DK++ + + + Sbjct: 255 KLVLFLVDGSWEPQDDDYEVLKYFREVGMPHLFILTKMDKVNVPETPAQILNFRQF---F 311 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETI 210 P IP S + + + KAIL+ Sbjct: 312 DLKSPLPIPFSKLGGGDLGSIWKAILDAC 340 >gi|228902998|ref|ZP_04067138.1| GTP-binding protein YihA [Bacillus thuringiensis IBL 4222] gi|228910304|ref|ZP_04074121.1| GTP-binding protein YihA [Bacillus thuringiensis IBL 200] gi|228941636|ref|ZP_04104183.1| GTP-binding protein YihA [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228967572|ref|ZP_04128598.1| GTP-binding protein YihA [Bacillus thuringiensis serovar sotto str. T04001] gi|228974565|ref|ZP_04135131.1| GTP-binding protein YihA [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981160|ref|ZP_04141460.1| GTP-binding protein YihA [Bacillus thuringiensis Bt407] gi|228778360|gb|EEM26627.1| GTP-binding protein YihA [Bacillus thuringiensis Bt407] gi|228784968|gb|EEM32981.1| GTP-binding protein YihA [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228792151|gb|EEM39727.1| GTP-binding protein YihA [Bacillus thuringiensis serovar sotto str. T04001] gi|228817848|gb|EEM63926.1| GTP-binding protein YihA [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228849364|gb|EEM94201.1| GTP-binding protein YihA [Bacillus thuringiensis IBL 200] gi|228856674|gb|EEN01194.1| GTP-binding protein YihA [Bacillus thuringiensis IBL 4222] Length = 149 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 49/151 (32%), Positives = 70/151 (46%), Gaps = 11/151 (7%) Query: 56 ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL 115 R S+ PG+TQ LNFF+ + M VD+PGYGYA+ K +WG +I Y Sbjct: 1 MRISSKPGKTQTLNFFLINEM---------MHFVDVPGYGYAKVSKSERAAWGKMIETYF 51 Query: 116 SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + R L L++D RH D ++ FL + I+ TK DK+ Q+ L+ K Sbjct: 52 TTRKQLDAAVLVVDLRHQPTSDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVK 111 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + E++ SS G E KAI Sbjct: 112 ETLA--VEIGDEIVLFSSETGLGKEEAWKAI 140 >gi|319776923|ref|YP_004136574.1| gtp-binding protein engb [Mycoplasma fermentans M64] gi|318037998|gb|ADV34197.1| Probable GTP-binding protein engB [Mycoplasma fermentans M64] Length = 194 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 11/200 (5%) Query: 12 WIFLRGVPEIGL-LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 W F+ + L ++ F GRSNVGKSSL+N + N+ N++ S PGRTQ +N+ Sbjct: 2 WKFITSAIDKKQWLDCKNSFQVCFWGRSNVGKSSLLNAITNQ-NISFVSKHPGRTQLINY 60 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + +VD+ GYGYA K+ V + +L + + ++LLID Sbjct: 61 FA---------DNNDKYIVDLHGYGYAEISKEKVIKMNLAVKDFLKNEPSPKHIFLLIDS 111 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R + D + +FL+ +Y IV TKIDKL+ ++K L +V Sbjct: 112 RTRFTKNDLETLTFLNSLNWNYDIVYTKIDKLNQKEKSALIKKHNELNSKIFKKSAQVFL 171 Query: 191 TSSVKRKGIEVLRKAILETI 210 SS K ++ + + I + + Sbjct: 172 VSSQKNINLDDIVQHIEKLL 191 >gi|119369217|sp|Q4A9N9|ENGB_MYCHJ RecName: Full=Probable GTP-binding protein EngB gi|144227637|gb|AAZ44532.2| putative GTP-binding protein [Mycoplasma hyopneumoniae J] Length = 198 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 95/196 (48%), Gaps = 21/196 (10%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FLR PE P+ AF GRSNVGKS+LIN L N+K +A+TS PGRTQ LNF+ Sbjct: 24 WKFLRSCPENCY----SDPQFAFIGRSNVGKSTLINALANKK-IAKTSTKPGRTQLLNFY 78 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N VD+PGYGYA K D +I Y + + V+L++D R Sbjct: 79 K---------NESEKLFVDLPGYGYAAVSKTKKDQIDRIIAGYFQKDQPISAVFLILDAR 129 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G +D + ++ K+ I+ KIDK + +T L + K L N + Sbjct: 130 VGFTNLDYIMIEYIIKQGFKLHILANKIDKTNQSTRAILLNQCKKLKLN-------CLLI 182 Query: 192 SSVKRKGIEVLRKAIL 207 S+ + + L++ + Sbjct: 183 SAKNKNNLSKLQELLE 198 >gi|71893797|ref|YP_279243.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma hyopneumoniae J] Length = 184 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 95/196 (48%), Gaps = 21/196 (10%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FLR PE P+ AF GRSNVGKS+LIN L N+K +A+TS PGRTQ LNF+ Sbjct: 10 WKFLRSCPENCY----SDPQFAFIGRSNVGKSTLINALANKK-IAKTSTKPGRTQLLNFY 64 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N VD+PGYGYA K D +I Y + + V+L++D R Sbjct: 65 K---------NESEKLFVDLPGYGYAAVSKTKKDQIDRIIAGYFQKDQPISAVFLILDAR 115 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G +D + ++ K+ I+ KIDK + +T L + K L N + Sbjct: 116 VGFTNLDYIMIEYIIKQGFKLHILANKIDKTNQSTRAILLNQCKKLKLN-------CLLI 168 Query: 192 SSVKRKGIEVLRKAIL 207 S+ + + L++ + Sbjct: 169 SAKNKNNLSKLQELLE 184 >gi|194246503|ref|YP_002004142.1| ribosome biogenesis GTP-binding protein YsxC [Candidatus Phytoplasma mali] gi|193806860|emb|CAP18289.1| conserved hypothetical protein [Candidatus Phytoplasma mali] Length = 196 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 10/199 (5%) Query: 13 IFLRGVPEIGL-LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 IF++ + +I PEI G+SNVGKSS IN L +K LAR S PG+T LN++ Sbjct: 6 IFIKSIAQIKDTFSLIKHPEIILIGKSNVGKSSFINNLTGQKKLARVSKNPGKTITLNYY 65 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + +F L+D PGYGYAR K+ ++ +I L R + LID + Sbjct: 66 LLNNF---------FYLIDTPGYGYARISKQIKKNFLIIIFDLLKNNLNYRKILYLIDFK 116 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G D ++ FL K +V TK DK++ T Q+ L K + N+ + Sbjct: 117 VGPNANDINICGFLIKNGFEIVLVFTKKDKINKTKIQQQLIKIQNNFNNFNISCDNFFLI 176 Query: 192 SSVKRKGIEVLRKAILETI 210 S+ ++GI + IL+ + Sbjct: 177 SNKNKEGIVEITNFILKNV 195 >gi|258567942|ref|XP_002584715.1| predicted protein [Uncinocarpus reesii 1704] gi|237906161|gb|EEP80562.1| predicted protein [Uncinocarpus reesii 1704] Length = 326 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 62/153 (40%), Positives = 88/153 (57%), Gaps = 9/153 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + ++L G +P+A PE+ F GRSNVGKSS+IN LV ++ +S GRT+ Sbjct: 89 SKHSPVYLWGTDIFRTIPEAAIPEVVFIGRSNVGKSSIINALVGE-DICASSKKLGRTKL 147 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 ++ KN +ALVD PGYG + WG I +YL +R LR ++LL Sbjct: 148 ISAIGLG---GTKNEDSRIALVDTPGYGKGSQAE-----WGQEIQKYLEKRKQLRRIFLL 199 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 +D + G+K D DV +FL + AV YQ+VLTK D Sbjct: 200 LDGKVGLKPRDHDVLAFLRQFAVPYQLVLTKSD 232 >gi|54020515|ref|YP_115958.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma hyopneumoniae 232] gi|81603640|sp|Q600K7|ENGB_MYCH2 RecName: Full=Probable GTP-binding protein EngB gi|53987688|gb|AAV27889.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232] Length = 198 Score = 159 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 94/196 (47%), Gaps = 21/196 (10%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL+ PE P+ AF GRSNVGKS+LIN L N+K +A+TS PGRTQ LNF+ Sbjct: 24 WKFLKSCPENCY----SEPQFAFIGRSNVGKSTLINALANKK-IAKTSTKPGRTQLLNFY 78 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N VD+PGYGYA K +I Y + + V+L++D R Sbjct: 79 K---------NESEKLFVDLPGYGYAAVSKTKKHQIDRIIAGYFQKDQPISAVFLILDAR 129 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G +D + ++ ++ I+ KIDK + +T L + K L N + Sbjct: 130 VGFTNLDYIMIEYIIQQGFKLHILANKIDKTNQSTRAILLNQCKKLKLN-------CLLI 182 Query: 192 SSVKRKGIEVLRKAIL 207 S+ + + L++ + Sbjct: 183 SAKNKNNLSKLQELLE 198 >gi|156095574|ref|XP_001613822.1| GTP-binding protein [Plasmodium vivax SaI-1] gi|148802696|gb|EDL44095.1| GTP-binding protein, putative [Plasmodium vivax] Length = 288 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 34/214 (15%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 I + P++A GRSNVGKSSLIN L+N + +A+ S PGRT+HL F Sbjct: 72 AQTIHKYRPSAVPQVAIFGRSNVGKSSLINALLNNREVAQASKTPGRTRHLFIF------ 125 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N L +++VD+PGYG+A+ K D W LI YL+ L+ LI+C Sbjct: 126 ---NLLNHLSIVDLPGYGFAKVAKHMRDDWSVLIEEYLNRAVNLKRALCLIECTEFFTPH 182 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA------------- 184 D + L K V +QIV+TK+D+L + + K +I +Y Sbjct: 183 DFVLLDMLITKGVPFQIVVTKVDRLRAHELHKLMVKVLSVIEDYKKKVNALNERTHRQSL 242 Query: 185 --HPEV----------IPTSSVKRKGIEVLRKAI 206 H EV SS++ G++ LR + Sbjct: 243 SLHKEVPHEMNISSYLFNVSSLRDFGVQPLRAHL 276 >gi|323452002|gb|EGB07877.1| hypothetical protein AURANDRAFT_64442 [Aureococcus anophagefferens] Length = 690 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 20/204 (9%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP +G PE+AF+GRSNVGKS+L+ L+ L R S PG T +NFF + Sbjct: 484 LPTSGVPEVAFAGRSNVGKSTLVGALLGDPALLRRSKTPGCTTSVNFFAVGRPGAPRRGG 543 Query: 84 P-------------AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLI 128 P + +VD+PG+GYAR + +++G + YLS R LR V +L+ Sbjct: 544 PRGAASDARRAAAAKLFVVDLPGFGYARRGGERREAFGAAALAYLSSRPGAVLRQVCVLV 603 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR--NYPTAHP 186 D R G D V + V +++VLTK D+ S L TK + + P Sbjct: 604 DARRGP---DPAVLESFSELRVPHRVVLTKCDRASAADVATALAATKDALDRPRRSSLLP 660 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 V S+ G++ LR+ + + + Sbjct: 661 VVHVVSAKTGFGVDDLRRHLADVV 684 >gi|119369216|sp|Q4A7S3|ENGB_MYCH7 RecName: Full=Probable GTP-binding protein EngB gi|144575461|gb|AAZ53816.2| GTP-binding protein [Mycoplasma hyopneumoniae 7448] Length = 198 Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 94/196 (47%), Gaps = 21/196 (10%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL+ PE P+ AF GRSNVGKS+LIN L N+K +A+TS PGRTQ LNF+ Sbjct: 24 WKFLKSCPENCY----SDPQFAFIGRSNVGKSTLINALANKK-IAKTSTKPGRTQLLNFY 78 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N VD+PGYGYA K +I Y + + V+L++D R Sbjct: 79 K---------NESEKLFVDLPGYGYAAVSKTKKHQIDRIIAGYFQKDQPISAVFLILDAR 129 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G +D + ++ ++ I+ KIDK + +T L + K L N + Sbjct: 130 VGFTNLDYIMIEYIIQQGFKLHILANKIDKTNQSTRAILLNQCKKLKLN-------CLLI 182 Query: 192 SSVKRKGIEVLRKAIL 207 S+ + + L++ + Sbjct: 183 SAKNKNNLSKLQELLE 198 >gi|149199892|ref|ZP_01876921.1| probable GTP binding protein [Lentisphaera araneosa HTCC2155] gi|149137063|gb|EDM25487.1| probable GTP binding protein [Lentisphaera araneosa HTCC2155] Length = 205 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 12/177 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F+GRSN GKSSL+N L R +A+ S PG+T+ +N F + L D+ Sbjct: 33 IVFAGRSNAGKSSLLNCLT-RSKIAQISREPGKTRKVNLF--------HCSFLKKVLADL 83 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PGYG+A+ KK W LI YL ++R + + L+ DCRHG D D F Sbjct: 84 PGYGFAKRTKKERRLWEELITSYLDADRDNIERIILVTDCRHGPADSDLDAMQFFKDHGF 143 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +VL+K DKL+ + ++ K L+++ + + SS+K G+ L + I+ Sbjct: 144 QVTVVLSKSDKLNQKATSKRRKEIKELLQD--SKPEKTFWISSLKGTGVRELSRDIV 198 >gi|72080781|ref|YP_287839.1| ribosome biogenesis GTP-binding protein YsxC [Mycoplasma hyopneumoniae 7448] Length = 184 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 94/196 (47%), Gaps = 21/196 (10%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W FL+ PE P+ AF GRSNVGKS+LIN L N+K +A+TS PGRTQ LNF+ Sbjct: 10 WKFLKSCPENCY----SDPQFAFIGRSNVGKSTLINALANKK-IAKTSTKPGRTQLLNFY 64 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 N VD+PGYGYA K +I Y + + V+L++D R Sbjct: 65 K---------NESEKLFVDLPGYGYAAVSKTKKHQIDRIIAGYFQKDQPISAVFLILDAR 115 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G +D + ++ ++ I+ KIDK + +T L + K L N + Sbjct: 116 VGFTNLDYIMIEYIIQQGFKLHILANKIDKTNQSTRAILLNQCKKLKLN-------CLLI 168 Query: 192 SSVKRKGIEVLRKAIL 207 S+ + + L++ + Sbjct: 169 SAKNKNNLSKLQELLE 184 >gi|118363026|ref|XP_001014615.1| GTP-binding protein, putative [Tetrahymena thermophila] gi|89296505|gb|EAR94493.1| GTP-binding protein, putative [Tetrahymena thermophila SB210] Length = 6516 Score = 158 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 9/191 (4%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 T F K W+ + + ++ + RSNVGKSS+IN ++N K + TSN PG Sbjct: 31 ETDFYKPKWMLAKNLLKVSER-SLSVLQAKLRRRSNVGKSSMINSILNFK-MMDTSNMPG 88 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 +T+ LNF N L+D PGYGYA+ +K + +WG ++ Y S L Sbjct: 89 KTRELNFITM-------NPQSGAVLIDPPGYGYAKGQRKEIQAWGKMMQNYFVHSSHLHR 141 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT 183 +++LID HG+K++D + L++K Y IV TK DK++ Q+ +E+ K +++ Sbjct: 142 LFILIDSEHGIKEVDLMLMELLEQKMKPYVIVYTKCDKINQQKQQKLVEEAKNKLKDKVL 201 Query: 184 AHPEVIPTSSV 194 ++ + TSS Sbjct: 202 SYHILHFTSSK 212 >gi|84997291|ref|XP_953367.1| GTP-binding protein/GTPase [Theileria annulata strain Ankara] gi|65304363|emb|CAI76742.1| GTP-binding protein/GTPase, putative [Theileria annulata] Length = 477 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 15/209 (7%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILV-------NRKNLARTSNAP 62 S F+ +LP G PEI GRSNVGKSS IN L+ + ++A S P Sbjct: 179 STLNFIGSYLHTTMLPSLGLPEICLVGRSNVGKSSFINSLMTYVKNKSRKCDMAFVSKTP 238 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYAR-APKKNVDSWGGLIVRYLSERSTL 121 G T+ +N F D + ++LVD+PGYGY + + ++ YL R L Sbjct: 239 GYTKSINIFEAVDS----RDRGVLSLVDLPGYGYTEIKNAETRKNMQSIMKAYLKRRHEL 294 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + V L+D + D +V + + + + +LTK+DK++ + + + Sbjct: 295 KLVLFLVDGSCDPQDDDYEVLKYFREVGMPHLFILTKMDKVNVPQTPAQIMNFRQF---F 351 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETI 210 P IP S + + + KAIL+ Sbjct: 352 DLKSPLPIPFSKLGGGDLGSIWKAILDAC 380 >gi|315053937|ref|XP_003176343.1| GTP-binding protein engB [Arthroderma gypseum CBS 118893] gi|311338189|gb|EFQ97391.1| GTP-binding protein engB [Arthroderma gypseum CBS 118893] Length = 314 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 37/233 (15%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + I L +P++ PE+ F GRSNVGKSS+IN+LV ++ TS PGRTQ Sbjct: 86 SKHSPIHLWTTNLFRKIPESDTPEVVFMGRSNVGKSSVINMLVGE-DICYTSATPGRTQT 144 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +N F LK + ++D PGYG A P+ WG +++YLS+R LR V+L+ Sbjct: 145 MNAFGVG---GLKGGETKINIIDSPGYGKASRPE-----WGHELMKYLSKRKQLRRVFLI 196 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID-----------KLSPTTAQETLEKTKY 176 I+C+ GVK D++V S L + + +QI+++K D K T + + Sbjct: 197 IECKAGVKHSDKEVLSILREFTIPHQIIVSKADHFITEGRAGDHKAHRTASLKQFRNIIA 256 Query: 177 LIRN-----YPTAHPE---VIPTS---------SVKRKGIEVLRKAILETINY 212 IR P ++ S + GI+ L+ IL+ + Sbjct: 257 RIRKEVTPTREEGIPPLGDILACSNKIRIGEGHNKHPLGIDALQWTILQAAGF 309 >gi|303311121|ref|XP_003065572.1| GTPase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240105234|gb|EER23427.1| GTPase family protein [Coccidioides posadasii C735 delta SOWgp] gi|320039387|gb|EFW21321.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 323 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 78/231 (33%), Positives = 114/231 (49%), Gaps = 40/231 (17%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + ++L G +P + PEIAF GRSNVGKSS+IN LV ++ +S+ PGRT+ Sbjct: 86 SKHSPVYLWGSSLFRTIPVSSIPEIAFIGRSNVGKSSIINGLVGE-DICASSSKPGRTKL 144 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 + K +ALVD PGYG + WG I +YL +R LR ++LL Sbjct: 145 MASIGV---GGTKGGGSKIALVDTPGYGKGSHTE-----WGQEIQKYLEKRKQLRRIFLL 196 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID----------KLSPTTAQETL----EK 173 ID G+K D V +FL + A+ YQ+VLTK+D K P ++ L + Sbjct: 197 IDAGVGLKTRDHQVLNFLRRFAIPYQLVLTKLDHALSFNGHKNKTKPNDSRSDLIRFSQT 256 Query: 174 TKYLIRNYPTAHP---------EVIPTS----SVKRK----GIEVLRKAIL 207 + ++ + +P +VI S S K+K G+ LR AIL Sbjct: 257 VQDILSSAQPVNPILDGPGPLNDVIACSVQMQSKKQKKSVAGLRSLRWAIL 307 >gi|195952762|ref|YP_002121052.1| small GTP-binding protein [Hydrogenobaculum sp. Y04AAS1] gi|195932374|gb|ACG57074.1| small GTP-binding protein [Hydrogenobaculum sp. Y04AAS1] Length = 184 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 67/190 (35%), Positives = 100/190 (52%), Gaps = 20/190 (10%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + PK P I +GRSNVGKSSLIN + N K +AR S PG T LNF++ ++ Sbjct: 8 VKDFPKDK-PCILLTGRSNVGKSSLINAIANTK-IARVSKDPGLTATLNFYIEEN----- 60 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQ 139 + +VD PGYGYA+ K+ + W +I ++ + CV+ LID G ++D Sbjct: 61 -----IYIVDTPGYGYAKRSKEERNRWANIINDFIENHGENILCVFALIDSVVGPTELDT 115 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + +LD K+++ +VLTKIDK + TL + K +N +I TSS GI Sbjct: 116 MLIDYLDSKSLNTMLVLTKIDKATQKELANTLNRLKAFDKN-------IIQTSSKDGIGI 168 Query: 200 EVLRKAILET 209 + L+ + E Sbjct: 169 KQLKAIMKEL 178 >gi|119194617|ref|XP_001247912.1| hypothetical protein CIMG_01683 [Coccidioides immitis RS] Length = 323 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 78/231 (33%), Positives = 114/231 (49%), Gaps = 40/231 (17%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + ++L G +P + PEIAF GRSNVGKSS+IN LV ++ +S+ PGRT+ Sbjct: 86 SKHSPVYLWGSSLFRTIPVSSIPEIAFIGRSNVGKSSIINGLVGE-DICASSSKPGRTKL 144 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 + K +ALVD PGYG + WG I +YL +R LR ++LL Sbjct: 145 MASIGV---GGTKGGGSKIALVDTPGYGKGSHTE-----WGQEIHKYLEKRKQLRRIFLL 196 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID----------KLSPTTAQETL----EK 173 ID G+K D V +FL + A+ YQ+VLTK+D K P ++ L + Sbjct: 197 IDAGVGLKTRDHQVLNFLRRFAIPYQLVLTKLDHALSFNGHKNKTKPNDSRSDLIRFSQT 256 Query: 174 TKYLIRNYPTAHP---------EVIPTS----SVKRK----GIEVLRKAIL 207 + ++ + +P +VI S S K+K G+ LR AIL Sbjct: 257 VQDILSSAQPVNPILDGPGPLNDVIACSVQMQSKKQKKSVAGLSSLRWAIL 307 >gi|13357826|ref|NP_078100.1| GTPase EngB [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|167971952|ref|ZP_02554229.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|168282428|ref|ZP_02690095.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|170762083|ref|YP_001752349.1| ribosome biogenesis GTP-binding protein YsxC [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|13124226|sp|Q9PQM5|ENGB_UREPA RecName: Full=Probable GTP-binding protein EngB gi|189037196|sp|B1AIQ5|ENGB_UREP2 RecName: Full=Probable GTP-binding protein EngB gi|11356756|pir||D82913 conserved hypothetical ATP/GTP-binding protein UU266 [imported] - Ureaplasma urealyticum gi|6899237|gb|AAF30675.1|AE002123_8 conserved hypothetical ATP/GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827660|gb|ACA32922.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|182675765|gb|EDT87670.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700634|gb|EDU18916.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 208 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 15/197 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P EI GRSNVGKSSLIN L N+K +ARTSN PGRTQ +NFF Sbjct: 4 FIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKK-IARTSNTPGRTQLVNFF-- 60 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A+ K+ +I +YL R L V+ + D Sbjct: 61 --------DFNNFRLVDLPGYGFAKVSKEKQTDLAAIIDQYLGYRQNLCAVFQICDINV- 111 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ + + + ++ +VL K+DK++ + K + + ++ S+ Sbjct: 112 LTNDDVEMSRYFENQKYAHFVVLNKLDKVNKSYFNNNKHKIAKFLN---ISTDRLLCVSA 168 Query: 194 VKRKGIEVLRKAILETI 210 I L + + + Sbjct: 169 QNNINIITLFALMKKVV 185 >gi|168308581|ref|ZP_02691256.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902437|gb|EDT48726.1| ATP/GTP-binding protein [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 208 Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 15/197 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ P EI GRSNVGKSSLIN L N+K +ARTSN PGRTQ +NFF Sbjct: 4 FIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKK-IARTSNTPGRTQLVNFF-- 60 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVD+PGYG+A+ K+ +I +YL R L V+ + D Sbjct: 61 --------DFNNFRLVDLPGYGFAKVSKEKQTDLAAIIDQYLGYRQNLCAVFQICDINV- 111 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ + + + ++ +VL K+DK++ + K + + ++ S+ Sbjct: 112 LTNDDVEMSRYFENQKYAHFVVLNKLDKVNKSYFNNNKHKIAKFLN---ISTDRLLCVSA 168 Query: 194 VKRKGIEVLRKAILETI 210 I L + + + Sbjct: 169 QNNINIITLFALMKKVV 185 >gi|26553493|ref|NP_757427.1| GTPase EngB [Mycoplasma penetrans HF-2] gi|81748121|sp|Q8EX09|ENGB_MYCPE RecName: Full=Probable GTP-binding protein EngB gi|26453499|dbj|BAC43831.1| predicted GTP-binding protein [Mycoplasma penetrans HF-2] Length = 186 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 15/197 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ EI F GRSNVGKSSLIN L N K +A+TSN PGRTQ NF+ Sbjct: 4 FIKSCFSSNDWITDDKKEICFIGRSNVGKSSLINALANAK-IAKTSNTPGRTQLANFY-- 60 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L+D+PGYGYA+ K +I Y+ R L V+ +ID Sbjct: 61 --------DFDKFRLIDLPGYGYAKVSKSKHFELSKIISEYIYLRKNLVAVFQIIDISV- 111 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + +D + L + + IVL K DK + + K ++ ++ S+ Sbjct: 112 ITDLDLQMSELLSNRFNQHYIVLNKADKEAKSYFDNNFAKIAAKLKK---DKENIVCVSA 168 Query: 194 VKRKGIEVLRKAILETI 210 + I L+K I I Sbjct: 169 KNKTNIPNLKKLIGSVI 185 >gi|15828710|ref|NP_326070.1| GTPase EngB [Mycoplasma pulmonis UAB CTIP] gi|24418391|sp|Q98QX1|ENGB_MYCPU RecName: Full=Probable GTP-binding protein EngB gi|14089652|emb|CAC13412.1| GTP-BINDING PROTEIN [Mycoplasma pulmonis] Length = 186 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 15/194 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ EI F GRSNVGK S + ++ +++ SN PGRTQ +NFF Sbjct: 4 FIKSASNSQSWYNHDKVEICFIGRSNVGK-SSLINSLSNSAVSKVSNTPGRTQLINFFE- 61 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + VD+PGYG+A+ PK ++ +I YL R L+ + LL D R G Sbjct: 62 --------DDQKNVYVDLPGYGFAQMPKDKLEKMHQMIDEYLQNRKNLKTIVLLFDSRRG 113 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D D ++ + + ++ TKIDKL+ + L K L V+ SS Sbjct: 114 ILDQDLDFINWAQQAKKNIILLATKIDKLNQAQKHKLLVSLKEL-----NLEKSVLLVSS 168 Query: 194 VKRKGIEVLRKAIL 207 +KR I+ L+K + Sbjct: 169 LKRTNIDNLKKLLA 182 >gi|71032165|ref|XP_765724.1| hypothetical protein [Theileria parva strain Muguga] gi|68352681|gb|EAN33441.1| GTP-binding protein, putative [Theileria parva] Length = 230 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 94/201 (46%), Gaps = 28/201 (13%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILV-------------------NRKNLARTSNAPGRT 65 P P+IAF G SNVGKSSLIN ++ A S PGRT Sbjct: 21 PLTKIPQIAFVGYSNVGKSSLINSILYGTDIPFFARKIVSNAKMLKNPKFAPVSKTPGRT 80 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 +HL F + ++LVD+PGYG A+ + + W L+ +YL L + Sbjct: 81 RHLFTFDLGN---------NISLVDLPGYGCAKVSDEVRNEWSLLVNKYLDRTDNLYRIL 131 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 L+D G + D ++S L++ + +Q+VLTK D+L P K +++++Y Sbjct: 132 SLVDSMKGPVKEDFKLWSMLNEIEIPFQVVLTKCDRLKPEELHLKYSKLIHILKDYEIFD 191 Query: 186 PEVIPTSSVKRKGIEVLRKAI 206 V TS+ + GI LR +I Sbjct: 192 QYVYATSATRLLGIHELRLSI 212 >gi|327308850|ref|XP_003239116.1| hypothetical protein TERG_01099 [Trichophyton rubrum CBS 118892] gi|326459372|gb|EGD84825.1| hypothetical protein TERG_01099 [Trichophyton rubrum CBS 118892] Length = 320 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 37/233 (15%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + + L +P++ PE+ F GRSNVGKSS+IN+LV ++ TS PGRTQ Sbjct: 86 SKHSPVHLWTTNLFRKIPESDIPEVVFMGRSNVGKSSVINMLVGE-DICYTSATPGRTQT 144 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +N F K + ++D PGYG A P+ WG +++YLS+R LR V+L+ Sbjct: 145 MNAFGIG---GTKGGETKINIIDSPGYGKASRPE-----WGHELMKYLSKRQQLRRVFLI 196 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL---------------SPTTAQETLE 172 I+C+ GVK D++V S L + V +QI+++K D S ++ + Sbjct: 197 IECKAGVKNSDKEVLSILREFTVPHQIIVSKADNFLTEGRAGNQESHRTASLKQFRQIIS 256 Query: 173 KTKYLIRNYPTAHPE----VIPTS---------SVKRKGIEVLRKAILETINY 212 + + + ++ S + GI+ L+ +IL+ + Sbjct: 257 RIRKEVTPTLEEGIPPLGHILACSNRIRIGEGHNKHPLGIDALQWSILQAAGF 309 >gi|157869343|ref|XP_001683223.1| hypothetical protein [Leishmania major strain Friedlin] gi|68224107|emb|CAJ04275.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 1166 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ + ++A+TS+ P T+ ++F F K+ N Sbjct: 411 EVAFAGRACAGKSSLLNALLGQ-HVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 469 Query: 80 KNNLPAMA----LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 470 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 529 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI R Y P +IP Sbjct: 530 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRRKYRKVFPFIIPV 589 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 590 SAKDGTNIELLRGLITET 607 >gi|157869363|ref|XP_001683233.1| hypothetical protein [Leishmania major strain Friedlin] gi|68224117|emb|CAJ04333.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 975 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ + ++A+TS+ P T+ ++F F K+ N Sbjct: 217 EVAFAGRACAGKSSLLNALLGQ-HVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 275 Query: 80 KNNLPAMA----LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 276 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 335 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI R Y P +IP Sbjct: 336 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRRKYRKVFPFIIPV 395 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 396 SAKDGTNIELLRGLITET 413 >gi|47459175|ref|YP_016037.1| GTPase EngB [Mycoplasma mobile 163K] gi|81614262|sp|Q6KHV1|ENGB_MYCMO RecName: Full=Probable GTP-binding protein EngB gi|47458504|gb|AAT27826.1| GTP-binding protein [Mycoplasma mobile 163K] Length = 181 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 57/186 (30%), Positives = 91/186 (48%), Gaps = 17/186 (9%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 F++ + K EI F GRSNVGKSSLIN L + + + PG+T+ +NFF Sbjct: 2 LKFIKSSTKESEWLKNPKNEICFVGRSNVGKSSLINALF-KTRVVKVGKTPGKTKLINFF 60 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + ++VD+PGYGYA+ K+ +I +L++R ++ ++LLID R Sbjct: 61 E---------DERGNSVVDLPGYGYAKLSKEAQSEISDMIFEFLTKRVEIKKLFLLIDSR 111 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G IDQ+ + FL + IV TK DKL+ + T + ++ + Sbjct: 112 LGFTPIDQEFYDFLKEAPFEIIIVATKRDKLNQSQ-------TYQIKKSLDELKVKYFLV 164 Query: 192 SSVKRK 197 S K++ Sbjct: 165 SITKKE 170 >gi|189190794|ref|XP_001931736.1| GTP-binding protein engB [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973342|gb|EDU40841.1| GTP-binding protein engB [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 307 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 121/241 (50%), Gaps = 49/241 (20%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVN---RKNLARTSNAPGRTQHLNFF 71 LR V + L P++ PE+AF GRSNVGKSSL+N LVN + LARTS PG T+ N + Sbjct: 42 LRSVAQFRLFPESDVPEVAFVGRSNVGKSSLLNTLVNADIKALLARTSATPGFTKTTNLY 101 Query: 72 VPK-----------DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 D + + +VDMPGYG + ++ +WG I++Y+ R Sbjct: 102 GLGPGNGVTIKQQPDGRDKIVGKNGLTIVDMPGYG-----EGSLAAWGTEILKYIQNRKQ 156 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE----------- 169 LR V++LID +HGVK D+ + + L VS+Q++L+K+DK+ A+E Sbjct: 157 LRRVFVLIDAQHGVKDKDRSLLATLRLSGVSHQVILSKLDKIFIPQAKEIKRYDGKSPRV 216 Query: 170 ------------TLEKTKYLI--RNYPTAHPEVIPTSSV-----KRKGIEVLRKAILETI 210 T+E K I + A E++ S+ KR GI+ +R A+L+ + Sbjct: 217 LKPKGTMIGLRHTMEDLKDDIQPKVGGGALGELLGVSAETVVDGKRLGIDHVRYAVLKAV 276 Query: 211 N 211 Sbjct: 277 G 277 >gi|326469475|gb|EGD93484.1| hypothetical protein TESG_01028 [Trichophyton tonsurans CBS 112818] Length = 320 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 37/233 (15%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + + L +P++ PE+ F GRSNVGKSS+IN+LV ++ TS PGRTQ Sbjct: 86 SKHSPVHLWTTNLFRKIPESDIPEVVFMGRSNVGKSSVINMLVGE-DICYTSATPGRTQT 144 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +N F +K + ++D PGYG A P+ WG +++YLS+R LR V+L+ Sbjct: 145 MNAFGVG---GMKGGETKINIIDSPGYGKASRPE-----WGHELMKYLSKRQQLRRVFLI 196 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL---------------SPTTAQETLE 172 I+C+ GVK D++V S L + V +QI+++K D S ++ + Sbjct: 197 IECKAGVKNSDKEVLSILREFTVPHQIIVSKADNFITEDRAGNHEAHRTASLKQFRQIIS 256 Query: 173 KTKYLIRNYPTAHPE----VIPTS---------SVKRKGIEVLRKAILETINY 212 + + + ++ S + GI+ L+ +IL+ + Sbjct: 257 RIRKEVTPTLEEGIPPLGDILACSNKIRIGEGHNKHPLGIDALQWSILQAAGF 309 >gi|296814868|ref|XP_002847771.1| GTPase EngB [Arthroderma otae CBS 113480] gi|238840796|gb|EEQ30458.1| GTPase EngB [Arthroderma otae CBS 113480] Length = 375 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 10/182 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 ++ + I L +P++ PE+ F GRSNVGKSS+IN+LV N+ TS PGRTQ Sbjct: 141 SRHSPIHLWTTNLFRKIPESDTPEVVFMGRSNVGKSSVINMLVGE-NICYTSATPGRTQT 199 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +N F K + ++D PGYG A P+ WG +++YLS+R LR V+L+ Sbjct: 200 MNAFAVG---GKKGGESKINIIDSPGYGKASRPE-----WGHELMKYLSKRKQLRRVFLI 251 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK-LSPTTAQETLEKTKYLIRNYPTAHP 186 I+C+ GVK D++V S L + + +QI+++K D ++ +R + Sbjct: 252 IECKAGVKNSDKEVLSILREFTIPHQIIVSKADGFITEGRVGNHKAHHTACLRQFRDVVE 311 Query: 187 EV 188 ++ Sbjct: 312 QI 313 >gi|322491776|emb|CBZ27049.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 934 Score = 154 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ + +A+TS+ P T+ ++F F K+ N Sbjct: 203 EVAFAGRACAGKSSLLNALLGQ-YVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 261 Query: 80 KNNLPAMA----LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 262 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 321 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI R Y P +IP Sbjct: 322 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRRKYRKVFPFIIPV 381 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 382 SAKDGTNIELLRGLITET 399 >gi|322491766|emb|CBZ27039.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1134 Score = 154 bits (391), Expect = 5e-36, Method: Composition-based stats. Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ + +A+TS+ P T+ ++F F K+ N Sbjct: 403 EVAFAGRACAGKSSLLNALLGQ-YVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 461 Query: 80 KNNLPAMA----LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 462 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 521 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI R Y P +IP Sbjct: 522 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRRKYRKVFPFIIPV 581 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 582 SAKDGTNIELLRGLITET 599 >gi|121700180|ref|XP_001268355.1| GTP binding protein (EngB), putative [Aspergillus clavatus NRRL 1] gi|119396497|gb|EAW06929.1| GTP binding protein (EngB), putative [Aspergillus clavatus NRRL 1] Length = 321 Score = 154 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 36/232 (15%) Query: 8 TKSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ + + + + P + P PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ Sbjct: 74 SRHSPVKIWSASKFRTTPLSSPEPEVAFLGRSNVGKSSLLNAIMG-KEICWTSSKPGRTR 132 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N F K + L+DMPGYG A WG I++YL R LR ++ Sbjct: 133 EMNAFGIG---GTKGGESKIVLLDMPGYGKAS-----RAEWGIEILKYLQGRRQLRRAFV 184 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK--------LSPTTAQETLEKTKYLI 178 LID HG+K+ D+D+ + A+ +QI+L+K+DK + + + + ++ Sbjct: 185 LIDSLHGIKKKDKDILKLFRQYAIPHQIILSKVDKVLAKKKSQVKSGASAANVAALRSML 244 Query: 179 RNY------------PTAHPEVIPTSSVKRK------GIEVLRKAILETINY 212 + P A E++ + GI +R AIL + Sbjct: 245 EDLRPVIQPDGRVEGPGALGEILTCGAETPTGPGQFLGISAIRWAILSAAGF 296 >gi|322499037|emb|CBZ34109.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 977 Score = 154 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ + ++A+TS+ P T+ ++F F K+ N Sbjct: 220 EVAFAGRACAGKSSLLNALLGQ-HVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 278 Query: 80 KNNLPAMA----LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 279 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 338 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR----NYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI Y P +IP Sbjct: 339 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRHKYRKVFPFIIPV 398 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 399 SAKDGTNIELLRGLITET 416 >gi|146086607|ref|XP_001465591.1| hypothetical protein [Leishmania infantum JPCM5] gi|134069690|emb|CAM68014.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 977 Score = 154 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF-----------FVPKDFSNL 79 E+AF+GR+ GKSSL+N L+ + ++A+TS+ P T+ ++F F K+ N Sbjct: 220 EVAFAGRACAGKSSLLNALLGQ-HVAKTSSTPNTTRKISFYQSVTPEQLHAFHVKEHHNQ 278 Query: 80 KNNLPAMA----LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 LP VD+PGYG K D+ L Y R ++ V +DC G+ Sbjct: 279 LVKLPGGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 338 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR----NYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI Y P +IP Sbjct: 339 KTDIKYLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITKHRHKYRKVFPFIIPV 398 Query: 192 SSVKRKGIEVLRKAILET 209 S+ IE+LR I ET Sbjct: 399 SAKDGTNIELLRGLITET 416 >gi|294892269|ref|XP_002773979.1| GTP-binding protein/GTPase, putative [Perkinsus marinus ATCC 50983] gi|239879183|gb|EER05795.1| GTP-binding protein/GTPase, putative [Perkinsus marinus ATCC 50983] Length = 245 Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats. Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 36/231 (15%) Query: 3 SHTIFTKS----AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNL--- 55 + +F++ I L V P + GRSNVGKS+LIN ++ + Sbjct: 4 ARELFSRKVVGYPLIGLWNVSRKSANNAHRTPAVVICGRSNVGKSTLINEILYGRQFDAN 63 Query: 56 -------------ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKK 102 A S GRT+H+ F D + LVD+PGYG+A Sbjct: 64 KYRIRWSSDNITHAPVSRKAGRTRHVFRFDLGDR---------LRLVDLPGYGFADVEGS 114 Query: 103 NVDSWGGLIVRYLS----ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTK 158 D W LI RYL + ++ V L+D R GVK +D+ ++ L +K + +Q+VLTK Sbjct: 115 VRDEWATLIERYLEVAGEDSEQVQRVISLVDSRRGVKGLDRALWEMLQEKKIPFQVVLTK 174 Query: 159 IDKLSPT-TAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRKAI 206 +D + + +E T L++ Y P V SS+ + G+ L ++ Sbjct: 175 VDLVRDVYGLHDVMENTIALLQEYDRELLWPYVHSVSSLHKHGVNDLLLSL 225 >gi|20093647|ref|NP_613494.1| GTP-binding protein [Methanopyrus kandleri AV19] gi|25452940|sp|Q8TYT5|ENGB_METKA RecName: Full=Probable GTP-binding protein EngB gi|19886519|gb|AAM01424.1| Predicted GTPase of the YihA family [Methanopyrus kandleri AV19] Length = 203 Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 24/197 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PEI GRSNVGKSSLI + R PG T+ F + L Sbjct: 1 MPEIVLVGRSNVGKSSLIRAITRGAADVRVGKRPGVTRKPVFHELD---------GELVL 51 Query: 89 VDMPGYGYAR-APKKNVDSWGGLIVRYLSERSTLRCVYLLIDC-----------RHGVKQ 136 VDMPG+G+ P++ + LIVRYL E+ + ++D R G Sbjct: 52 VDMPGFGFMSGVPRRYQERVKDLIVRYLEEKDNILFAIHVVDAKALPEIAERWERRGEIP 111 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSS 193 ID+++F FL++ + + KIDK+ P +E ++ + +P + P S+ Sbjct: 112 IDREMFQFLNEVGLDPIVAANKIDKIKPIEFEEHMDAVAEALGLFPPWRQWLDTLFPISA 171 Query: 194 VKRKGIEVLRKAILETI 210 +G+ +A+ E + Sbjct: 172 KTGEGLVEFLEALQERV 188 >gi|31076686|sp|Q89AD0|ENGB_BUCBP RecName: Full=Probable GTP-binding protein EngB Length = 228 Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 14/203 (6%) Query: 4 HTIFTK---SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 + +F K S W FL+ + I E+AF G SN GKSS+IN L N+K LA+ S Sbjct: 22 NILFQKNYHSTW-FLKSIANIQKEKYNYGLEVAFVGYSNSGKSSIINALTNQKKLAKISR 80 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRT+ +N F + LVD PGYGYA+ + W +I +YL+ + Sbjct: 81 TPGRTRLINIFSVT---------SEIRLVDFPGYGYAQVSRSISKKWKEMIFQYLNIQKC 131 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ + ++ D R +K+ID+ V + + ++L K+DK++ + + L T+ + N Sbjct: 132 LQGLVIITDIRCPIKEIDELVINLAVSLNIPILLLLNKMDKVTRSIQKSKLFSTREKMLN 191 Query: 181 YPTAHPEVIPTSSVKRKGIEVLR 203 + + V SS K+ GI L+ Sbjct: 192 FSN-NINVELFSSFKKIGIHKLQ 213 >gi|27904864|ref|NP_777990.1| putative GTP-binding protein EngB [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|27904262|gb|AAO27095.1| putative GTP-binding protein EngB [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 236 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 14/203 (6%) Query: 4 HTIFTK---SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 + +F K S W FL+ + I E+AF G SN GKSS+IN L N+K LA+ S Sbjct: 30 NILFQKNYHSTW-FLKSIANIQKEKYNYGLEVAFVGYSNSGKSSIINALTNQKKLAKISR 88 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PGRT+ +N F + LVD PGYGYA+ + W +I +YL+ + Sbjct: 89 TPGRTRLINIFSVT---------SEIRLVDFPGYGYAQVSRSISKKWKEMIFQYLNIQKC 139 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L+ + ++ D R +K+ID+ V + + ++L K+DK++ + + L T+ + N Sbjct: 140 LQGLVIITDIRCPIKEIDELVINLAVSLNIPILLLLNKMDKVTRSIQKSKLFSTREKMLN 199 Query: 181 YPTAHPEVIPTSSVKRKGIEVLR 203 + + V SS K+ GI L+ Sbjct: 200 FSN-NINVELFSSFKKIGIHKLQ 221 >gi|145536053|ref|XP_001453754.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|74833765|emb|CAI39351.1| rab_C86 [Paramecium tetraurelia] gi|124421487|emb|CAK86357.1| unnamed protein product [Paramecium tetraurelia] Length = 308 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 9/181 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P E+ F GRSNVGKSSLIN ++ +K +A TS+ G T L F + + + Sbjct: 75 PKEVLFVGRSNVGKSSLINAILGQK-VAETSSKTGSTLRLQFHNIQTING--------FV 125 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD PGYGY++ G++ Y S L +Y+LID HG+K D+ + + L ++ Sbjct: 126 VDSPGYGYSQINVDAQKYMQGMMYTYTKLSSRLARIYVLIDIEHGIKDKDKVMLNMLQEQ 185 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V+ QIVLTK DK+ + I+ + HP + S+ GI ++ ++++ Sbjct: 186 NVNIQIVLTKCDKIKERMLYDRQLYLAREIKQFKNIHPIIHTVSTKDNFGINDIQYSLID 245 Query: 209 T 209 + Sbjct: 246 S 246 >gi|325120273|emb|CBZ55827.1| putative GTP-binding protein [Neospora caninum Liverpool] Length = 499 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 43/228 (18%) Query: 3 SHTIFTKS-AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLAR---- 57 S +F K A + + LP P++A G SNVGKSSL+N L++ +++AR Sbjct: 261 SRILFGKPIAAHPVLVAQTLHKLPHNPWPQVAAVGHSNVGKSSLLNALMHGRDVARSCSI 320 Query: 58 ---------------TSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKK 102 S+APGRT+HL F + ++LVD+PGYG+AR + Sbjct: 321 PLPNGKVLTLPKVAPVSHAPGRTRHLFTFDLGNH---------LSLVDLPGYGFARVKPQ 371 Query: 103 NVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 + W LI Y + + V + +D+ ++ L +K + +Q+VLTK+D L Sbjct: 372 LKEEWAILIEEYFTRSKHTKGV----------EPLDEKLWQLLAEKDLPFQVVLTKVDLL 421 Query: 163 SPTTAQE----TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S E L + + + + HP V SS GI LR ++ Sbjct: 422 SAPQLHEAMFNVLTRLQTVEKKETLLHPFVHAVSSRYNHGIPELRASL 469 >gi|154322893|ref|XP_001560761.1| hypothetical protein BC1G_00789 [Botryotinia fuckeliana B05.10] gi|150848123|gb|EDN23316.1| hypothetical protein BC1G_00789 [Botryotinia fuckeliana B05.10] Length = 286 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 40/231 (17%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 ++ FTK L + + F S VGKSSL+N L+N K A TS+ P Sbjct: 37 ANGFFTKKHPKHLWSTSQFYSM--------EFGDSSEVGKSSLLNALLNTKA-AYTSSKP 87 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 GRT+ +N F ++N + ++DMPGYG+ P+ WG I++YL +R L+ Sbjct: 88 GRTRSMNAFAIGGHEGSEDNSERLVVLDMPGYGHGGRPE-----WGKEIIKYLEKRKQLK 142 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL----------------SPTT 166 ++L+D HG+K+ D+ + L + V +Q+VL+KIDK+ Sbjct: 143 RAFVLVDAEHGIKESDRVMLQMLRSQKVPHQVVLSKIDKMLFSNTKKIPSNDNLQNRMAR 202 Query: 167 AQETLEKTKYLIRNYPTAHP------EVIPTSSVK----RKGIEVLRKAIL 207 + L++TK +I P + E++ +S K + GI+ +R A+L Sbjct: 203 LNKVLQETKEMIEPDPESEEADSMTGEILTCTSEKCAGRKYGIDAVRFAML 253 >gi|322379277|ref|ZP_08053663.1| GTPase EngB [Helicobacter suis HS1] gi|322379851|ref|ZP_08054139.1| GTPase EngB [Helicobacter suis HS5] gi|321147729|gb|EFX42341.1| GTPase EngB [Helicobacter suis HS5] gi|321148314|gb|EFX42828.1| GTPase EngB [Helicobacter suis HS1] Length = 232 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 6/168 (3%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+R + P A E+AF GRSNVGKS+ IN L+ K +A++S PG+T+ NFF Sbjct: 38 FVRSSTRLQDCPPANMAEVAFLGRSNVGKSTFINQLLECK-IAKSSTTPGKTKTANFFTT 96 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 L+ + VD+PG+GYA+ K WGG + L +R +++ LID RH Sbjct: 97 T--WQLEQEVVKFGCVDLPGFGYAKVSKSLKQEWGGFLYTLLKQRVSIKLFLHLIDSRHP 154 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLI 178 +ID + FL V TK DKL+ KT +L+ Sbjct: 155 NLEIDAALQQFLKSVIKPDQQIMCVYTKFDKLNSHDQHALYYKTPHLL 202 >gi|10176792|dbj|BAA96928.2| unnamed protein product [Arabidopsis thaliana] Length = 397 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 54/146 (36%), Positives = 85/146 (58%), Gaps = 10/146 (6%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + ++F ++ F P PEIAF+GRSNVGKSSL+N L + + RTS+ Sbjct: 262 IEESVF-RNKLEFFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDK 320 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG TQ +NFF P + LVD+PGYG+A A + ++W L+ Y+S R++L Sbjct: 321 PGLTQTINFFGLG---------PKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSL 371 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDK 147 + V LL+D + G+K DQ++ + +++ Sbjct: 372 KRVCLLVDTKWGMKPRDQELINLMER 397 >gi|323456296|gb|EGB12163.1| hypothetical protein AURANDRAFT_61460 [Aureococcus anophagefferens] Length = 510 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 69/231 (29%), Positives = 104/231 (45%), Gaps = 37/231 (16%) Query: 13 IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 F+ G + LPK+G PE+A GRSNVGKSSL+N++ NR++ A TS PG+TQ N+F Sbjct: 272 QFVTGAVSMDTLPKSGRPEVALVGRSNVGKSSLVNMITNRRSAAFTSKKPGKTQQFNYFD 331 Query: 73 PKDFSNLKN-----------------------NLPAMALVDMPGYGYARAPKKNVDSWGG 109 + LVD+PG GYA AP D+W Sbjct: 332 VNAPGDDARRPRFASANDGTAPAPRPRKRPWAPPGRFFLVDVPGSGYALAPGAARDAWAA 391 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA----------VSYQIVLTKI 159 L+ RYL+ER+ + V L+D R G + D ++F+ + + +VLTK Sbjct: 392 LLERYLAERADVVVVLHLVDARVGAQPTDAELFALTARCDAARRDRGLEPLRPVLVLTKA 451 Query: 160 D----KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 D K+S A ++ TS+V ++G + L + + Sbjct: 452 DKKDSKVSLDAQARLRADLAAATSPDRAATTPIVVTSAVSKRGRDDLWRVL 502 >gi|294660541|ref|NP_853351.2| GTPase EngB [Mycoplasma gallisepticum str. R(low)] gi|298286806|sp|Q7NAR6|ENGB_MYCGA RecName: Full=Probable GTP-binding protein EngB gi|284812204|gb|AAP56919.2| GTPase EngB [Mycoplasma gallisepticum str. R(low)] gi|284930844|gb|ADC30783.1| GTPase EngB [Mycoplasma gallisepticum str. R(high)] gi|284931232|gb|ADC31170.1| GTPase EngB [Mycoplasma gallisepticum str. F] Length = 186 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 15/197 (7%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F++ + E+ GRSNVGKS++IN L N K +A+TS PGRT +NF+ Sbjct: 4 FIKSATSLKDCINDSKKEVCLIGRSNVGKSTIINGLANAK-IAQTSKTPGRTVTMNFYEI 62 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +VD+PGYGYAR K + + YL+ R L ++L++D Sbjct: 63 SN----------QRIVDLPGYGYARIKKSQKEEISLFLSDYLNHRKNLVGIFLILDLGV- 111 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D ++ L V Y IV KIDK + EK ++ ++ S+ Sbjct: 112 ITDQDIEIVRLLTTLDVEYYIVFNKIDKYPKSAYINNKEKILDALK---VNEDRILLISA 168 Query: 194 VKRKGIEVLRKAILETI 210 ++ + L I++ I Sbjct: 169 KNKQNLNNLMLKIIDVI 185 >gi|317178289|dbj|BAJ56078.1| GTPase EngB [Helicobacter pylori F16] Length = 208 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R++++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWKGFLWELLSVRASIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTAHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|317010258|gb|ADU80838.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori India7] Length = 208 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 8/200 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSGQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQID---QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID ++ L + +Y + TK DKL+ L + + Sbjct: 128 DLEIDKSAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLLL---NAPKPFLINTTHFNA 184 Query: 191 TSSVKRKGIEVLRKAILETI 210 SS K +E +R+ +L+ + Sbjct: 185 LSS-KYPTLETVRQTLLKYL 203 >gi|332674378|gb|AEE71195.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori 83] Length = 208 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTAEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTAHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|317182792|dbj|BAJ60576.1| GTPase EngB [Helicobacter pylori F57] Length = 208 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSGQLSQCPASLTSEMVILGRSNVGKSSFINALLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTAHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|308183722|ref|YP_003927849.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori PeCan4] gi|308065907|gb|ADO07799.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori PeCan4] Length = 208 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ L K +Y + TK DKL+ L K + N + Sbjct: 128 NLEIDKNAKENIQALLKPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTAHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +EV+R+ +L+ + Sbjct: 186 ---SSKYPTLEVVRQTLLKYL 203 >gi|109948148|ref|YP_665376.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter acinonychis str. Sheeba] gi|122973208|sp|Q17VE9|ENGB_HELAH RecName: Full=Probable GTP-binding protein EngB gi|109715369|emb|CAK00377.1| conserved hypothetical GTP-binding protein [Helicobacter acinonychis str. Sheeba] Length = 208 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ ++ P + E+ GRSNVGKSS IN L+ KNLA++S+ PG+T+ NFF Sbjct: 9 FITSSSQLSQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSSTPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +++D+PG+GYA+ K W G + LS R++++ LID RH Sbjct: 68 TWEDKKNALTTTFSVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLIDARHL 127 Query: 134 VKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L K + N + Sbjct: 128 NLEIDKNAKENIQTLLRSDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|217031722|ref|ZP_03437226.1| hypothetical protein HPB128_155g35 [Helicobacter pylori B128] gi|298737141|ref|YP_003729671.1| GTP-binding protein [Helicobacter pylori B8] gi|216946569|gb|EEC25169.1| hypothetical protein HPB128_155g35 [Helicobacter pylori B128] gi|298356335|emb|CBI67207.1| GTP-binding protein [Helicobacter pylori B8] Length = 208 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKS+ IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ LID RH Sbjct: 68 TWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLIDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 DLEIDKNAKENIQALLRPDQAYLTLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|317011804|gb|ADU85551.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori SouthAfrica7] Length = 208 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKS+ IN L+ KNLA++S+ PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSSTPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +++D+PG+GYA+ K W G + L R++++ LID RH Sbjct: 68 TWEDKENALTTTFSVIDLPGFGYAKVSKSLKKEWEGFLWELLGVRTSIKLFIHLIDARHL 127 Query: 134 VKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L K + N + Sbjct: 128 DLEIDKNAKENIQTLLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|188528359|ref|YP_001911046.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori Shi470] gi|238691958|sp|B2UVY4|ENGB_HELPS RecName: Full=Probable GTP-binding protein EngB gi|188144599|gb|ACD49016.1| GTPase EngB [Helicobacter pylori Shi470] gi|308064349|gb|ADO06236.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori Sat464] Length = 208 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 20/206 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSGQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID++ + Y + TK DKL+ R + A + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQH----------RLFLNAPKPFLI 177 Query: 191 TS------SVKRKGIEVLRKAILETI 210 S S K +EV+R+ +L+ + Sbjct: 178 NSAHFNALSSKYPTLEVVRQTLLKYL 203 >gi|224436945|ref|ZP_03657926.1| GTPase EngB [Helicobacter cinaedi CCUG 18818] Length = 234 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 12/202 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ EI F GRSNVGKSSLIN L+N LA++S+ PG+TQ +NFF Sbjct: 29 FMTSATNPKNASAPSITEIVFLGRSNVGKSSLINALLNAP-LAKSSSTPGKTQLINFFS- 86 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +N + VD+PG+GYA+ K W ++ +L R +++ L+D RH Sbjct: 87 -SLWLKENQKIPLCFVDLPGFGYAKVSKSIKKEWEKNLLSFLLSRQSIKLFLHLVDSRHT 145 Query: 134 VKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID+ V +FL + Q +L TK DKL + K +N + + Sbjct: 146 DLEIDKSVEAFLQEICKGDQKILRIYTKADKLKQNALSSL--QCKLTQQNILDSQTQSYL 203 Query: 191 TS--SVKR--KGIEVLRKAILE 208 S + I LR+ IL+ Sbjct: 204 CSITAKNHKITSIPALREKILD 225 >gi|261838854|gb|ACX98620.1| GTPase [Helicobacter pylori 51] gi|315585973|gb|ADU40354.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori 35A] Length = 208 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTAHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|154147982|ref|YP_001405909.1| GTP-binding protein [Campylobacter hominis ATCC BAA-381] gi|153803991|gb|ABS50998.1| GTP-binding protein [Campylobacter hominis ATCC BAA-381] Length = 210 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 62/169 (36%), Positives = 89/169 (52%), Gaps = 10/169 (5%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL EI + EIAF GRSNVGKSS IN +VN+KNLA++S PG+TQ +NFF Sbjct: 9 FLISASEISQINDFAKSEIAFLGRSNVGKSSFINAIVNQKNLAKSSAIPGKTQLINFFEV 68 Query: 74 --KDFSNLKNNLP-----AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 KD KN ++ VD+PG+GYA+ KK W + ++ R+ ++ Sbjct: 69 NFKDEILSKNGENSAQNFSLIFVDLPGFGYAKVSKKMHFIWQKNLDEFIKNRTGIKLFVH 128 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLE 172 LID R +ID++ S++ Q ++ TK DKL+ L+ Sbjct: 129 LIDSRQFDLEIDENADSYIRSFLRPDQALIKFYTKSDKLNQKEKAAVLK 177 >gi|237738527|ref|ZP_04569008.1| GTP-binding protein [Fusobacterium sp. 2_1_31] gi|229424229|gb|EEO39276.1| GTP-binding protein [Fusobacterium sp. 2_1_31] Length = 147 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 13/158 (8%) Query: 54 NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVR 113 LARTS PGRTQ +N+F+ D +VD+PGYG+A+ PK+ WG + R Sbjct: 2 KLARTSKTPGRTQLINYFLIND---------EFYIVDLPGYGFAKVPKEMKKQWGQTMER 52 Query: 114 YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEK 173 Y++ + + V++L+D R D ++ +L+ + Y+I+ TKIDKLS + L+ Sbjct: 53 YIASKRK-KLVFVLLDIRRVPSDEDIEMLEWLEYNEMDYKIIFTKIDKLSNNERAKQLKA 111 Query: 174 TKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 K + +V SS+ KG + + + E +N Sbjct: 112 IKTRL---VFEKEDVFFHSSLTNKGRDEILTFMEEKLN 146 >gi|124516596|gb|EAY58104.1| GTP-binding protein [Leptospirillum rubarum] Length = 212 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 13/200 (6%) Query: 11 AWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + +F+R + LP I F GRSNVGKSSLIN L NR +LA+ PG+T N Sbjct: 13 SAMFVRSLASPEDLPFLEEKAVIGFVGRSNVGKSSLINKLANRHHLAKVGRTPGKTTLAN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 + +D PGYGY R K+ L + + +L+ + LL+D Sbjct: 73 LYSLD---------KGGYFIDFPGYGYMRRDKETAQKARSLSTLLVEKIPSLQRILLLVD 123 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPE 187 R + +D + +L+ IVL+K D ++ Q + K L+R P Sbjct: 124 IRRDILPVDVEALLWLENLGRPVTIVLSKSDLVNRNDVQRVQKLWKDLLRERMNQVTSPP 183 Query: 188 VIPTSSVKRKGIEVLRKAIL 207 ++ S+ +G+ + ++ Sbjct: 184 LVL-STKTGEGLGEIVDLLV 202 >gi|145541630|ref|XP_001456503.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|74831141|emb|CAI39251.1| rab_C101 [Paramecium tetraurelia] gi|124424315|emb|CAK89106.1| unnamed protein product [Paramecium tetraurelia] Length = 308 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 9/181 (4%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P E+ F GRSNVGKSSLIN ++ +K +A TS+ G T L F + + + Sbjct: 75 PKEVLFVGRSNVGKSSLINAILGQK-VAETSSRTGSTLRLQFHNIQTING--------FV 125 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD PGYGY++ G+I Y S L +Y+LID HG+K D+ + + L ++ Sbjct: 126 VDSPGYGYSQINVDAQKYMQGMIYTYTKLASRLSRIYVLIDIEHGLKDKDRVMLNMLQEQ 185 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V+ QIVLTK DK+ + I+ + HP + S+ GI ++ ++++ Sbjct: 186 NVNIQIVLTKCDKVKERMLFDRQLYLAREIKQFKNIHPIIHTVSTKDNFGINDIQYSLID 245 Query: 209 T 209 + Sbjct: 246 S 246 >gi|297380742|gb|ADI35629.1| GTP-binding conserved hypothetical protein [Helicobacter pylori v225d] Length = 208 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID++ + Y + TK DKL+ R + A + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQH----------RLFLNAPKPFLI 177 Query: 191 TS------SVKRKGIEVLRKAILETI 210 S S K +E++R+ +L+ + Sbjct: 178 NSTHFNALSSKYPTLEIVRQTLLKYL 203 >gi|261840260|gb|ACY00026.1| GTPase EngB [Helicobacter pylori 52] Length = 208 Score = 151 bits (383), Expect = 4e-35, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|308062850|gb|ADO04738.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori Cuz20] Length = 208 Score = 151 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALKATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID++ + Y + TK DKL+ R + A + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQH----------RLFLNAPKPFLI 177 Query: 191 TS------SVKRKGIEVLRKAILETI 210 S S K +E++R+ +L+ + Sbjct: 178 NSAHFNALSSKYPTLEIVRQTLLKYL 203 >gi|210135745|ref|YP_002302184.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori P12] gi|238058984|sp|B6JP76|ENGB_HELP2 RecName: Full=Probable GTP-binding protein EngB gi|210133713|gb|ACJ08704.1| GTP-binding protein EngB [Helicobacter pylori P12] Length = 208 Score = 151 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R++++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 DLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|322829796|gb|EFZ33067.1| hypothetical protein TCSYLVIO_575 [Trypanosoma cruzi] Length = 885 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 19/197 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--------------PKDF 76 EI G++ GKSSL+N L+ + LA+TS+ P T+ ++F+ Sbjct: 220 EIVLVGKACAGKSSLLNALLGQ-TLAKTSSTPNTTRQISFYQSVSPEEMQRYLNVKGNGL 278 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 L + VD+PG+G D L YL R ++ V IDC G+ + Sbjct: 279 VKLPGGGVQLTFVDVPGFGIEGMSDHWRDKAIALTDAYLGVRRSVNTVLFCIDCERGLTK 338 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPTS 192 +D F++L+ + IVLTK D + + + + I R Y P ++PTS Sbjct: 339 VDLRYFNWLENLHGVFFIVLTKCDSVPHSRVCSVMRQIYSTITKYRRKYRKVFPFILPTS 398 Query: 193 SVKRKGIEVLRKAILET 209 + +E+LR I ET Sbjct: 399 AKDGTNVELLRGLIAET 415 >gi|15612540|ref|NP_224193.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori J99] gi|11387370|sp|Q9ZJ42|ENGB_HELPJ RecName: Full=Probable GTP-binding protein EngB gi|4156107|gb|AAD07059.1| putative [Helicobacter pylori J99] Length = 208 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 8/200 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + P + E+ GRSNVGKS+ IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSNNLSQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ LID RH Sbjct: 68 TWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLIDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID++ + Y + TK DKL+ + + Sbjct: 128 DLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFL---NAPKPFLINTIHFNA 184 Query: 191 TSSVKRKGIEVLRKAILETI 210 SS K +E++R+ +L+ + Sbjct: 185 LSS-KYPTLEIVRQTLLKYL 203 >gi|317181269|dbj|BAJ59055.1| GTPase EngB [Helicobacter pylori F32] Length = 208 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 20/206 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRVTFNVIDLPGFGYAKVSKNLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +ID++ + Y + TK DKL+ R + A + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQH----------RLFLNAPKPFLI 177 Query: 191 TS------SVKRKGIEVLRKAILETI 210 S S K +E++R+ +L+ + Sbjct: 178 NSTHFNALSSKYPTLEIVRQTLLKYL 203 >gi|6841492|gb|AAF29099.1|AF161484_1 HSPC135 [Homo sapiens] Length = 307 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 101/235 (42%), Gaps = 45/235 (19%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEI------------------------AFS 35 + IFT ++ ++ I P PE+ F Sbjct: 81 ADNIFTATERNRIDYVSSAVRIDHAPDLPRPEVRGDSTVHLRAGVTALPLPGRPARGVFY 140 Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGR--TQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 +SNVGKSSLI + + L S +P TQ FF +VDMPG Sbjct: 141 RQSNVGKSSLIKLYFHWP-LRLKSESPKNQDTQENEFFKVGKH---------FTVVDMPG 190 Query: 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 YG+ RAP+ VD ++ YL ER L+ +LL+D G+++ D ++ A+ Y Sbjct: 191 YGF-RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYV 245 Query: 154 IVLTKIDKLSPTT-AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 IVLTKIDK S ++ L+ K++ P++ P S+V GI +LR I Sbjct: 246 IVLTKIDKSSKGHLLKQVLQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLRCFIA 300 >gi|317179768|dbj|BAJ57556.1| GTPase EngB [Helicobacter pylori F30] Length = 208 Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + L R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLIVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|206603472|gb|EDZ39952.1| GTP-binding protein [Leptospirillum sp. Group II '5-way CG'] Length = 212 Score = 151 bits (381), Expect = 9e-35, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 11/199 (5%) Query: 11 AWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 + +F+R + LP I F GRSNVGKSSLIN L NR +LA+ PG+T N Sbjct: 13 SAMFVRSLASPEELPFLEEKAVIGFVGRSNVGKSSLINKLANRHHLAKVGRTPGKTTLAN 72 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 + +D PGYGY + K+ L + + L+ + LL+D Sbjct: 73 LYSLD---------KGGYFIDFPGYGYMKRDKETAQKARSLSTLLVEKMPCLQRILLLVD 123 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEV 188 R + +D + +L+ IVL+K D ++ + K L+R Sbjct: 124 IRRDILPVDLEALFWLENLGRPLTIVLSKSDLVNRNEVHRVQKLWKDLLRERMSQVTSSP 183 Query: 189 IPTSSVKRKGIEVLRKAIL 207 + S+ +G+ + ++ Sbjct: 184 LVLSTKTGEGLGEIVDLLV 202 >gi|298705654|emb|CBJ28902.1| YihA3, YihA/EngB-like GTPase [Ectocarpus siliculosus] Length = 420 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 13/187 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVN---RKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 PE+A +G +N GKS+L+N L R+ A TS+ G T + F+ P Sbjct: 198 LPEVALAGHTNCGKSTLVNALSGIHPRRGPASTSDRAGWTDLVGFYQVGK------KPPV 251 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + +VD+PGYG+A A + + W +I Y++ R L +L+DC G + D+ + L Sbjct: 252 LTMVDLPGYGHAVATRHAIKGWLRMIKEYITTRQELIRCCVLVDCTRGFCEEDRALLQLL 311 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSV---KRKGIEV 201 K+ + YQIVLTK D L+P + + + + P S+V G+ Sbjct: 312 AKRNIPYQIVLTKADLLTPELLSACVLLLRRDLSDLCGQEAGSTAPFSAVCGTSGAGVTT 371 Query: 202 LRKAILE 208 L K + + Sbjct: 372 LWKDLAK 378 >gi|254780098|ref|YP_003058205.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori B38] gi|254002011|emb|CAX30270.1| GTP-binding protein [Helicobacter pylori B38] Length = 208 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 DLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|290990802|ref|XP_002678025.1| predicted protein [Naegleria gruberi] gi|284091635|gb|EFC45281.1| predicted protein [Naegleria gruberi] Length = 442 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 41/213 (19%) Query: 31 EIAFSGRSNVGKSSLINILV-NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 EIA GRSNVGKSSL++ + + + S PGRTQ LN+F+ K + LV Sbjct: 90 EIAIIGRSNVGKSSLVSSIFKGKATDVKISKTPGRTQTLNYFLLK--------RLNLYLV 141 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL---LIDCRH-------------- 132 DMPGYG+A+ PK + W LI Y R + L+D R Sbjct: 142 DMPGYGFAKVPKSLLRGWHVLIRDYFKHRMNYDKYLITLWLLDVRRIKDFADAIAKNPEN 201 Query: 133 ------GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK---------YL 177 G+K+ D + F +L K + Y IVLTK+DK + E ++ + Sbjct: 202 ATNPTLGLKKSDVEFFHYLVKNEIPYTIVLTKVDKQNYNVLGEVIKSLRILLLRELKELK 261 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + P +I +S+ + GI +R I T+ Sbjct: 262 MTKTVNISPNIILSSAKRGHGIPEIRNFIASTV 294 >gi|261329362|emb|CBH12343.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 921 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 19/197 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--------------PKDF 76 EI G++ GKSSL+N L+ ++ +A+TS+ P T+ L+F+ Sbjct: 243 EIVLVGKACAGKSSLLNALLGQQ-VAKTSSTPNTTRKLSFYQSVSPEEMQRYLNVKGNGL 301 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 L + VD+PG+G ++ D L YL R ++ + L IDC G+ + Sbjct: 302 VKLPGGGLQLTFVDVPGFGLEGMSEQWRDKAIELTDAYLGVRRSVNTLLLCIDCERGLTK 361 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPTS 192 +D F++L+ + +VLTK D + + + + +I R Y P +IPTS Sbjct: 362 VDLRYFTWLENLHGVFFVVLTKCDSVPHSRVCSVMRQIYSVITKNRRKYRKVFPFIIPTS 421 Query: 193 SVKRKGIEVLRKAILET 209 + IE+LR I ET Sbjct: 422 ANDGTNIEMLRGLIAET 438 >gi|72391184|ref|XP_845886.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62175518|gb|AAX69658.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70802422|gb|AAZ12327.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 900 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 19/197 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--------------PKDF 76 EI G++ GKSSL+N L+ ++ +A+TS+ P T+ L+F+ Sbjct: 222 EIVLVGKACAGKSSLLNALLGQQ-VAKTSSTPNTTRKLSFYQSVSPEQMQRYLNVKGNGL 280 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 L + VD+PG+G ++ D L YL R ++ + L IDC G+ + Sbjct: 281 VKLPGGGLQLTFVDVPGFGLEGMSEQWRDKAIELTDAYLGVRRSVNTLLLCIDCERGLTK 340 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPTS 192 +D F++L+ + +VLTK D + + + + +I R Y P +IPTS Sbjct: 341 VDLRYFTWLENLHGVFFVVLTKCDSVPHSRVCSVMRQIYSVITKNRRKYRKVFPFIIPTS 400 Query: 193 SVKRKGIEVLRKAILET 209 + IE+LR I ET Sbjct: 401 ANDGTNIEMLRGLIAET 417 >gi|317013382|gb|ADU83990.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori Lithuania75] Length = 208 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKS+ IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALITTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 DLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTAHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|170105204|ref|XP_001883815.1| predicted protein [Laccaria bicolor S238N-H82] gi|164641450|gb|EDR05711.1| predicted protein [Laccaria bicolor S238N-H82] Length = 249 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 98/222 (44%), Gaps = 23/222 (10%) Query: 2 VSHTIFTKSA-WIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 IF S F+ G +P G PE GR+N GKSSL N ++ R +L TS Sbjct: 37 AVEKIFADSKSAEFVAGAGSATSIPDLHGLPEEIIPGRANAGKSSLFNSVLGRTSLLHTS 96 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 PG TQ LNF+ + LVD PGYG P WG + YL R Sbjct: 97 KKPGHTQQLNFYRVG------AEPGKLVLVDAPGYGARGRP-----QWGEMFDGYLRSRK 145 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV------SYQI--VLTKIDKLSPTTAQETL 171 LR VY+L + +HG+ D + S L V + + V+TKID + Q +L Sbjct: 146 ELRRVYILFNAKHGLNGYDTQMLSHLSTFLVSPSGTQPFTLQAVITKIDTVPVGKVQGSL 205 Query: 172 EKTKYLIRNYPTAHPEVIPTSSVKR--KGIEVLRKAILETIN 211 EK + I + I TSS+ GI+++R+ I E Sbjct: 206 EKMRKDIFAFAPLCLPPIVTSSLMSPPFGIDLVRRNIAEACG 247 >gi|71662732|ref|XP_818368.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70883616|gb|EAN96517.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 906 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 19/197 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--------------PKDF 76 EI G++ GKSSL+N L+ + LA+TS+ P T+ ++F+ Sbjct: 241 EIVLVGKACAGKSSLLNALLGQ-TLAKTSSTPNTTRQISFYQSVSPEEMQRYLNVKGNGL 299 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 L + VD+PG+G D L YL R ++ V IDC G+ + Sbjct: 300 VKLPGGGVQLTFVDVPGFGIEGMSDHWRDKAIALTDAYLGVRRSVNTVLFCIDCERGLTK 359 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPTS 192 +D F++L+ + IVLTK D + + + + I R Y P ++PTS Sbjct: 360 VDLRYFTWLENLHGVFFIVLTKCDSVPHSRVCSVMRQIYATITKYRRKYRKVFPFILPTS 419 Query: 193 SVKRKGIEVLRKAILET 209 + +E+LR I ET Sbjct: 420 AKDGTNVELLRGLIAET 436 >gi|307638254|gb|ADN80704.1| GTP-binding protein [Helicobacter pylori 908] gi|325996846|gb|ADZ52251.1| GTP-binding protein [Helicobacter pylori 2018] gi|325998438|gb|ADZ50646.1| Ribosome biogenesis GTP-binding protein [Helicobacter pylori 2017] Length = 208 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKS+ IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R++++ L+D RH Sbjct: 68 TWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 DLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKHL 203 >gi|317015004|gb|ADU82440.1| GTP-binding protein YsxC [Helicobacter pylori Gambia94/24] Length = 208 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKS+ IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + +D+PG+GYA+ K W G + LS R++++ L+D RH Sbjct: 68 TWEDKENALMTTFNAIDLPGFGYAKVSKSLKKEWEGFLWELLSVRTSIKLFIHLVDARHL 127 Query: 134 VKQIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ L + +Y + TK DKL+ L K + N + Sbjct: 128 DLEIDKNAKESIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|308185354|ref|YP_003929487.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori SJM180] gi|308061274|gb|ADO03170.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori SJM180] Length = 208 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSGQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 ID++ + Y + TK DKL+ L K + N + Sbjct: 128 DLGIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|116515192|ref|YP_802821.1| EngB [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116257046|gb|ABJ90728.1| putative GTPase, involved in coordination of cell cycle, engB family [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 202 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 10/199 (5%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 F+ + L E+AF G SNVGKS++IN L +AR S PGRT+ +NF Sbjct: 8 NMKFITSIINYSNLGTFSGIEVAFLGYSNVGKSTMINCLSGNNKIARISKLPGRTKTINF 67 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + L +VD PGYGY++ + + YL R L+ + LL D Sbjct: 68 F---------HVLSDFRIVDFPGYGYSKINYLDKKLLEKSLFFYLKNRECLKGIVLLSDI 118 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R +K D+ + FL K+ + I+LTK DK+S ++ +E KY ++ + + Sbjct: 119 RFFLKSFDEFILQFLKKRNLFVLIILTKSDKISKREKKK-IELLKYNKISHLHMNITICS 177 Query: 191 TSSVKRKGIEVLRKAILET 209 S + I+ +RK + + Sbjct: 178 FSKFYKNNIQFIRKILSKW 196 >gi|156064673|ref|XP_001598258.1| hypothetical protein SS1G_00344 [Sclerotinia sclerotiorum 1980] gi|154691206|gb|EDN90944.1| hypothetical protein SS1G_00344 [Sclerotinia sclerotiorum 1980 UF-70] Length = 248 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 28/196 (14%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 PE+ F GRSNVGKSSL+N L+N KN A TS+ GRT+ +N F ++N + Sbjct: 4 GDSPEVCFLGRSNVGKSSLLNALLNNKNAAYTSSKVGRTRCMNAFAIGGHEGSEDNSDRL 63 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++DMPGYG+ + WG I++YL +R L+ ++LID +HG+K++D+ + L Sbjct: 64 VVLDMPGYGHGGRSE-----WGKEIIKYLEKRKQLKRAFVLIDAQHGIKELDRVMLQMLR 118 Query: 147 KKAVSYQIVLTKIDKL---SPTT--------------AQETLEKTKYLIRNYPTAHP--- 186 + V +Q+VL+K+DK+ S T L++ K +I P + Sbjct: 119 SRKVPHQVVLSKVDKILFPSNTKGIPGSDALENRITGLDNFLQEVKAMIEAVPESDDADS 178 Query: 187 ---EVIPTSSVKRKGI 199 E++ +S KR G Sbjct: 179 LIGEILTCTSEKRAGR 194 >gi|71651554|ref|XP_814453.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70879425|gb|EAN92602.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 908 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 19/197 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--------------PKDF 76 EI G++ GKSSL+N L+ + LA+TS+ P T+ ++F+ Sbjct: 241 EIVLVGKACAGKSSLLNALLGQ-TLAKTSSTPNTTRQISFYQSVSPEEMQRYLNVKGNGL 299 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 L + VD+PG+G D L YL R ++ V +DC G+ + Sbjct: 300 VKLPGGGVQLTFVDVPGFGIEGMSDHWRDKAIALTDAYLGVRRSVNTVLFCVDCERGLTK 359 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPTS 192 +D F++L+ + IVLTK D + + + + I R Y P ++PTS Sbjct: 360 VDLRYFTWLENLHGVFFIVLTKCDSVPHSRVCSVMRQIYATITKYRRKYRKVFPFILPTS 419 Query: 193 SVKRKGIEVLRKAILET 209 + +E+LR I ET Sbjct: 420 AKDGTNVELLRGLIAET 436 >gi|208435446|ref|YP_002267112.1| conserved hypothetical GTP-binding protein [Helicobacter pylori G27] gi|238058985|sp|B5Z9J7|ENGB_HELPG RecName: Full=Probable GTP-binding protein EngB gi|208433375|gb|ACI28246.1| conserved hypothetical GTP-binding protein [Helicobacter pylori G27] Length = 208 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRISIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 DLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|15646174|ref|NP_208358.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori 26695] gi|6226454|sp|O26087|ENGB_HELPY RecName: Full=Probable GTP-binding protein EngB gi|2314750|gb|AAD08606.1| conserved hypothetical GTP-binding protein [Helicobacter pylori 26695] Length = 208 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 DLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTAHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKHL 203 >gi|217033821|ref|ZP_03439246.1| hypothetical protein HP9810_877g25 [Helicobacter pylori 98-10] gi|216943719|gb|EEC23162.1| hypothetical protein HP9810_877g25 [Helicobacter pylori 98-10] Length = 208 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLSQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y TK DKL+ L K + N + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSFFTKFDKLNKNEQHRLFLNAPKPFLINTAHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|313143417|ref|ZP_07805610.1| GTPase EngB [Helicobacter cinaedi CCUG 18818] gi|313128448|gb|EFR46065.1| GTPase EngB [Helicobacter cinaedi CCUG 18818] Length = 205 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 12/201 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + EI F GRSNVGKSSLIN L+N LA++S+ PG+TQ +NFF Sbjct: 1 MTSATNPKNASAPSITEIVFLGRSNVGKSSLINALLNAP-LAKSSSTPGKTQLINFFS-- 57 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 +N + VD+PG+GYA+ K W ++ +L R +++ L+D RH Sbjct: 58 SLWLKENQKIPLCFVDLPGFGYAKVSKSIKKEWEKNLLSFLLSRQSIKLFLHLVDSRHTD 117 Query: 135 KQIDQDVFSFLDKKAVSYQIVL---TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 +ID+ V +FL + Q +L TK DKL + K +N + + Sbjct: 118 LEIDKSVEAFLQEICKGDQKILRIYTKADKLKQNALSSL--QCKLTQQNILDSQTQSYLC 175 Query: 192 S--SVKR--KGIEVLRKAILE 208 S + I LR+ IL+ Sbjct: 176 SITAKNHKITSIPALREKILD 196 >gi|145486124|ref|XP_001429069.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124396159|emb|CAK61671.1| unnamed protein product [Paramecium tetraurelia] Length = 242 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 12/170 (7%) Query: 38 SNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYA 97 SNVGKSSL+N L+ R N+A TSN PG+T+ L+F+ +VD PGYG+A Sbjct: 81 SNVGKSSLLNALLGR-NVAETSNYPGKTRSLDFYNLGQSK---------VIVDSPGYGFA 130 Query: 98 RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLT 157 + KK++ WG L+ Y+ L+ Y+LID HG K +D + + IV T Sbjct: 131 KGNKKDIQHWGYLMQYYIKNSPFLKQSYVLIDSEHGFKDVDAMTLQLMQSLEKPFTIVFT 190 Query: 158 KIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 K DK+S E ++K++ + + + + TS R G+ L+++I Sbjct: 191 KCDKISK--IDELVQKSRENLEKHIYSSQVLHFTSVRNRTGLVELQQSIA 238 >gi|154337503|ref|XP_001564984.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062023|emb|CAM45109.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1000 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 20/198 (10%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV--------PKDFSNLKNN 82 E+ GR+ GKSSL+N L+ ++ +A+TS+ P T+ ++F+ N Sbjct: 253 EVVLVGRACAGKSSLLNALLGQQ-VAKTSSMPNTTRKISFYQSVTPEQLHAFHAREHHNQ 311 Query: 83 LP-------AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 L + VD+PGYG D+ L Y R ++ V +DC G+ Sbjct: 312 LVKLPGGGLQLTFVDLPGYGIEGMSDAWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLT 371 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI----RNYPTAHPEVIPT 191 + D +++ + +VLTK D + + + + LI R Y P ++P Sbjct: 372 KTDIKYLEWIENVHGTCFVVLTKCDSVPHSRVCSVMRQVYALITKHRRKYRKVFPFILPV 431 Query: 192 SSVKRKGIEVLRKAILET 209 S+ +EVLR I ET Sbjct: 432 SAKDGTNMEVLRGLITET 449 >gi|108563941|ref|YP_628257.1| ribosome biogenesis GTP-binding protein YsxC [Helicobacter pylori HPAG1] gi|119369204|sp|Q1CR39|ENGB_HELPH RecName: Full=Probable GTP-binding protein EngB gi|107837714|gb|ABF85583.1| conserved hypothetical GTP-binding protein [Helicobacter pylori HPAG1] Length = 208 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 10/201 (4%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL ++ P + E+ GRSNVGKSS IN L+ KNLA++S PG+T+ NFF Sbjct: 9 FLTSSSQLFQCPASLTSEMVILGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D+PG+GYA+ K W G + LS R +++ L+D RH Sbjct: 68 TWEDKENALTTTFNVIDLPGFGYAKVSKNLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127 Query: 134 VKQIDQDVFSFLDKKAVS---YQIVLTKIDKLSPTTAQET-LEKTKYLIRNYPTAHPEVI 189 +ID++ + Y + TK DKL+ L K + N + Sbjct: 128 NLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTTHFNAL-- 185 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S K +E++R+ +L+ + Sbjct: 186 ---SSKYPTLEIVRQTLLKYL 203 >gi|75763598|ref|ZP_00743296.1| GTP-binding protein YihA [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488914|gb|EAO52432.1| GTP-binding protein YihA [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 143 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 11/146 (7%) Query: 56 ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL 115 R S+ PG+TQ L FF+ + M LVD+PGYGYA+ K +WG +I Y Sbjct: 1 MRISSKPGKTQTLXFFLINEM---------MHLVDVPGYGYAKVSKSERAAWGKMIETYF 51 Query: 116 SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTK 175 + R L L++D RH D ++ FL + I+ TK DK+ Q+ L+ + Sbjct: 52 TTRKQLDAAVLVVDLRHQPTSDDVMMYDFLKHYEIPTIIIATKADKIPKGKWQKHLKVVQ 111 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEV 201 + E++ +SS G E Sbjct: 112 EPLA--VEIGDEIVLSSSETGLGKEE 135 >gi|239608031|gb|EEQ85018.1| GTP binding protein [Ajellomyces dermatitidis ER-3] gi|327356496|gb|EGE85353.1| GTP binding protein [Ajellomyces dermatitidis ATCC 18188] Length = 341 Score = 147 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 62/190 (32%), Positives = 88/190 (46%), Gaps = 15/190 (7%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + + I + E +P + PE+AF GRSN GKSSL+N ++ KN+ TS G T Sbjct: 67 SNHSPIRMWTASEFRTIPMSDVPEVAFLGRSNSGKSSLLNAIM-EKNMCFTSATLGLTTT 125 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LN + K + LVD PGYG + WG I++YL++R LR Y+L Sbjct: 126 LNAYGIG---GKKGGEAKVVLVDTPGYGKGSN-----EEWGEEILKYLTKRKQLRRTYIL 177 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL------SPTTAQETLEKTKYLIRNY 181 I+ HG+K D + S L AV +QI+L+K D + E+ L R Sbjct: 178 INSHHGIKAADAAILSLLRANAVPHQIILSKADSVLIKGGQKRGARGLRPERIDELCRFA 237 Query: 182 PTAHPEVIPT 191 V P Sbjct: 238 DKVRKRVQPV 247 >gi|156089105|ref|XP_001611959.1| GTPase family protein protein [Babesia bovis] gi|154799213|gb|EDO08391.1| GTPase family protein protein [Babesia bovis] Length = 444 Score = 147 bits (373), Expect = 6e-34, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%) Query: 10 SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINIL-----VNRK--NLARTSNAP 62 S F+ +LP PEI GRSNVGKSS IN + +K ++A S P Sbjct: 146 STLEFIGSYIHTAILPSLALPEICLVGRSNVGKSSFINTMMTYMKTRKKSCDMAFVSKTP 205 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYAR-APKKNVDSWGGLIVRYLSERSTL 121 G T+ +N F D +++ D+PGYG+ + ++ V + + YL R+ L Sbjct: 206 GYTKCINIFKAVDTKG----RDVLSIADLPGYGFVKIKNRETVHAMNSALRAYLQRRNEL 261 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 + + LID + D +V L + + IV TK+DK++ T + + + Y Sbjct: 262 KFIIFLIDGSLQPQSSDMEVHEMLKSMGIPFIIVCTKMDKVAQTQIPGQILLFRQV---Y 318 Query: 182 PTAHPEVIPTSSVKRKGIEV--LRKAILETI 210 P I S K G ++ + AI + Sbjct: 319 KIESPLPIAYS--KYGGADLGGIWGAIFDAC 347 >gi|299745493|ref|XP_001831753.2| hypothetical protein CC1G_08357 [Coprinopsis cinerea okayama7#130] gi|298406611|gb|EAU90084.2| hypothetical protein CC1G_08357 [Coprinopsis cinerea okayama7#130] Length = 236 Score = 147 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 23/195 (11%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 G PE+ +GR+N GKS+L+N ++ RK L TS+ GRT+ LNF+ + + Sbjct: 51 NGLPEVIVTGRANAGKSTLLNAVLGRKALLHTSSKAGRTRELNFYRVGEEPGH------L 104 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD PGYG + WG L YL R LR VY+L + +HG+ + D+ + L Sbjct: 105 ILVDAPGYG-----ARGRIEWGRLFDAYLDTRKELRRVYILFNAKHGLNEFDRQMLQHLS 159 Query: 147 KKAVSY--------QIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAHPEVIPTSSVKR- 196 +K +S Q V+TK D + + T+ + + I P P +I TS Sbjct: 160 QKLISTDGTQPWTLQSVITKADLVPTSQLSNTISRMRKEIFEASPLCLPPLI-TSCEMNP 218 Query: 197 -KGIEVLRKAILETI 210 GIE +R+ I + Sbjct: 219 PFGIEKVRENIAQAC 233 >gi|297745779|emb|CBI15835.3| unnamed protein product [Vitis vinifera] Length = 395 Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats. Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 36/231 (15%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + +IF ++ F P PEIAF+GRSNVGKSS++N L + + RTS+ Sbjct: 166 IEESIF-RNKLTFFAAANVSSSFPPPDLPEIAFAGRSNVGKSSMLNALTRQWGVVRTSDK 224 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER--S 119 PG TQ +NFF ++LVD+PGYG+A A ++ DSW L+ Y+ + Sbjct: 225 PGLTQTINFFKLG---------SKLSLVDLPGYGFAYAKEEVKDSWEELVNEYMIMSCFN 275 Query: 120 TLRCVYL----------------LIDCRHGV----KQIDQDVFSFLD----KKAVSYQIV 155 +++ + L+ CR + ++ D+D+ + + YQI+ Sbjct: 276 SIKKICSEVHKTFHNSIQHNIRNLMFCRMIIILFLERQDKDLLFYFVFLFYRAQTKYQIL 335 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 LTK D + P + + ++ + ++ SS GI LR + Sbjct: 336 LTKTDLVFPIDVARRAMQIEESLKANKSIVQPLMMVSSKSGAGIPSLRTVL 386 >gi|294947742|ref|XP_002785471.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239899382|gb|EER17267.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 319 Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAM 86 G P +AF GRSN GKSSL+N L+ + +AR S PGRT+ L F + +D + + Sbjct: 94 GVPTVAFCGRSNAGKSSLVNGLLFGRQVARASKTPGRTRQLFTFDLGRDEHIREGKGRPL 153 Query: 87 ALVDMPGYGYARAPK-KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF- 144 +VD+PG G+A+ W L+ Y+ LR V LID GVK D+ ++ Sbjct: 154 RIVDLPGLGFAKGIDADQKAEWRALVGEYMERADNLRLVVSLIDVIEGVKSTDEYLWKLT 213 Query: 145 --------LDKKAVS--------YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--- 185 + ++ +VLTK+D++ PTT E + I + + Sbjct: 214 VRSMENRSIMEEGPPPPRNIKSRLMVVLTKVDRVLPTTLHEEVASILSRIEYWQKEYDLT 273 Query: 186 --PEVIPTSSVKRKGIEVLRKAILETIN 211 P V S+ G+ LR A++E ++ Sbjct: 274 FWPYVHCVSAQDGHGMSELRAALVEAMD 301 >gi|322710804|gb|EFZ02378.1| GTP binding protein (EngB), putative [Metarhizium anisopliae ARSEF 23] Length = 360 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 97/243 (39%), Gaps = 37/243 (15%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 + F+ S FL + PEI G SNVGKS+ +N LV + AR S Sbjct: 94 AADKFFSSSPCRFLYSAEALRHHSMNNVTPEIVVLGSSNVGKSTFLNALVGQPKAARVSQ 153 Query: 61 APGRTQHLNFFVPKDFSNLKN---------NLPAMALVDMPGYGYARAPKKNVDSWGGLI 111 PGRT +N + + ++ +VD PGYG+ K+ SWG + Sbjct: 154 KPGRTTLMNAYGVGPLPKIPRGLVPKGMPPPRHSLVVVDTPGYGF-----KSQSSWGDAV 208 Query: 112 VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK---------- 161 ++YL R TLR +L+ + D+ + L + +VLTK DK Sbjct: 209 IKYLQARRTLRGAVVLLSSEKKLLPEDKWMLRTLAEANTRTVVVLTKADKARNGWVETCS 268 Query: 162 LSPTTAQETLEKTKYLI----RNYPTAHPEVIPTSS--------VKRKGIEVLRKAILET 209 L Q+ +++ + ++ A + T++ GI +R AILE Sbjct: 269 LLADVVQQEVDRLDQELGGKWKDGQDASSRIYITAAGMETPGRLKNGGGIGGVRTAILEM 328 Query: 210 INY 212 + Sbjct: 329 AGF 331 >gi|310794854|gb|EFQ30315.1| ribosome biogenesis GTP-binding protein YsxC [Glomerella graminicola M1.001] Length = 462 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 72/173 (41%), Gaps = 22/173 (12%) Query: 6 IFTKSAWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 F FL + P PEI G SN GKSS IN L N +LA+ S+ G+ Sbjct: 164 FFLSPPAKFLYSAFRLKHHPLNTTTPEICVVGASNCGKSSFINALTNSASLAKVSDRAGK 223 Query: 65 TQHLNFFVPKDFSNLK----------------NNLPAMALVDMPGYGYARAPKKNVDSWG 108 T +N + + L + LVD PGYGYA + WG Sbjct: 224 TVSMNAYGVGTLAGLPFRTPVAAEGGGATKEVQPEHGLVLVDTPGYGYAS-----HEEWG 278 Query: 109 GLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 IV YL++R+ LR V LL+ V + D + L +V TK+DK Sbjct: 279 REIVEYLNKRTMLRGVILLLSSEKKVSEKDAQIVKLLADAGRPVMLVFTKMDK 331 >gi|261200064|ref|XP_002626433.1| GTP binding protein [Ajellomyces dermatitidis SLH14081] gi|239594641|gb|EEQ77222.1| GTP binding protein [Ajellomyces dermatitidis SLH14081] Length = 324 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 57/153 (37%), Positives = 81/153 (52%), Gaps = 9/153 (5%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 + + I + E +P + PE+AF GRSN GKSSL+N ++ KN+ TS G T Sbjct: 67 SNHSPIRMWTASEFRTIPMSDVPEVAFLGRSNSGKSSLLNAIM-EKNMCFTSATLGLTTT 125 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 LN + K + LVD PGYG + WG I++YL++R LR Y+L Sbjct: 126 LNAYGIG---GKKGGEAKVVLVDTPGYGKGSN-----EEWGEEILKYLTKRKQLRRTYIL 177 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 I+ HG+K D + S L AV +QI+L+K D Sbjct: 178 INSHHGIKAADAAILSLLRANAVPHQIILSKAD 210 >gi|254577361|ref|XP_002494667.1| ZYRO0A06886p [Zygosaccharomyces rouxii] gi|238937556|emb|CAR25734.1| ZYRO0A06886p [Zygosaccharomyces rouxii] Length = 323 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 32/197 (16%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVN---RKNL---ARTSNAPGRTQHLNFFVPKDFSNLK 80 G PE+AF G+SN GKS+L+N L + +L AR S G T+ LN F Sbjct: 135 NGLPEVAFLGKSNAGKSTLLNSLTTDLKQTSLGEYARASKRAGFTKTLNSF--------- 185 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 N +VD PGYGY + ++ G L + Y+S+R L +LLI G +D Sbjct: 186 NIGNKFRIVDTPGYGYNSSAEQ-----GNLTMEYVSQRQQLARCFLLISGEQGFNDMDLQ 240 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------ 194 + FL ++IV TK+DK+ L+ + + + P +I T+S+ Sbjct: 241 IVEFLSSIGKPFEIVFTKMDKVKD------LKGFQNMNLHELPGLPGIIFTNSLISKTCP 294 Query: 195 KRKGIEVLRKAILETIN 211 KR G+++LR+ I ++ Sbjct: 295 KRYGVDLLRRLIFQSCG 311 >gi|255714671|ref|XP_002553617.1| KLTH0E03036p [Lachancea thermotolerans] gi|238934999|emb|CAR23180.1| KLTH0E03036p [Lachancea thermotolerans] Length = 353 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 28/197 (14%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNR------KNLARTSNAPGRTQHLNFFVPKDFSNLK 80 G PE+AF GR N GKS+L+N + + A+ S G T+ +N F Sbjct: 160 NGLPEVAFLGRCNAGKSTLLNNITTQFSHVKLNEYAKASKKAGFTKTVNCF--------- 210 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 N ++D PGYG K+ G + +RYL ER L+ +LL+ G D Sbjct: 211 NIGGRFRIIDTPGYG-----GKSTQEQGDVTMRYLRERQELKRCFLLVSAEQGFATTDSQ 265 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------ 194 V FL K + ++++ TK+DK+ + E + + ++ P++I +S Sbjct: 266 VVDFLTKFGIPFEVIFTKMDKIKDVSQLENVIEDSGVLE--LPTLPQMIFLNSETNKRYP 323 Query: 195 KRKGIEVLRKAILETIN 211 KR GI+ LR ILE+ Sbjct: 324 KRYGIDALRSLILESCG 340 >gi|294889300|ref|XP_002772751.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] gi|239877284|gb|EER04567.1| GTP-binding protein, putative [Perkinsus marinus ATCC 50983] Length = 317 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 22/206 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF-VPKDFSNLKNNLPAM 86 G P +AF GRSN GKSSL+N L+ + +AR S PGRT+ L F + +D + + Sbjct: 94 GVPTVAFCGRSNAGKSSLVNGLLFGRQVARASKTPGRTRQLFTFDLGRDEHIREGKGRPL 153 Query: 87 ALVDMPGYGYARAPK-KNVDSWGGLIVRYLSERSTLRCVYL---LIDCRHGVKQIDQDVF 142 +VD+PG G+A+ W L+ Y+ LR V + LID GVK D+ ++ Sbjct: 154 RIVDLPGLGFAKGIDADQKAEWRALVGEYMERADNLRLVVIIVSLIDVIEGVKSTDEYLW 213 Query: 143 SF---------LDKKAVS---YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH----- 185 + ++ +VLTK+D++ PTT E + I + + Sbjct: 214 KLTVRSMENRSIMEEGPPPPRLMVVLTKVDRVLPTTLHEEVASILSRIEYWQQEYDLTFW 273 Query: 186 PEVIPTSSVKRKGIEVLRKAILETIN 211 P V S+ G+ LR A++E ++ Sbjct: 274 PYVHCVSAQDGHGMSELRAALVEAMD 299 >gi|242789725|ref|XP_002481422.1| GTP binding protein (EngB), putative [Talaromyces stipitatus ATCC 10500] gi|218718010|gb|EED17430.1| GTP binding protein (EngB), putative [Talaromyces stipitatus ATCC 10500] Length = 332 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 58/254 (22%) Query: 8 TKSAWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 T+ + + L + +P + PE+AF G++NVGKSSLIN LV+ + + R+ + G+T Sbjct: 77 TRHSPVKLYSAAQFRTIPFDSKEPEVAFLGKTNVGKSSLINALVDDE-ICRSGDKRGKTT 135 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N + K + L+DMPGYG P++ G I++YL R LR Y+ Sbjct: 136 EMNAYGIG---GTKGGESKIVLLDMPGYGAGSRPEQ-----GEEIMKYLKNRKQLRRTYI 187 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID-------------------KLSP-TT 166 LID HG+K DQ + + L + A+ +Q++++K+D KLS + Sbjct: 188 LIDLLHGIKPHDQQILTLLRQYAIPHQLIVSKVDRILCDKIKSIKHWHYNRKIKLSKLSK 247 Query: 167 AQETLEKTKYLIR-------------------NYPTAHPEVIPTS-------SVKRK--G 198 Q+ LEK + R P E+I S S+K+ G Sbjct: 248 LQQELEKLRAYDRIPSNPEDRNYEFAAALAATKGPPPLGEIICVSAMTDVAGSMKKSFLG 307 Query: 199 IEVLRKAILETINY 212 I LR +I++ + Sbjct: 308 INALRWSIMQATGF 321 >gi|228999259|ref|ZP_04158839.1| GTP-binding protein YihA [Bacillus mycoides Rock3-17] gi|228760456|gb|EEM09422.1| GTP-binding protein YihA [Bacillus mycoides Rock3-17] Length = 129 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKTERAAWGRMIETYFTTREQLDAAVLVVDLRHPPTNDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + EV+ SS G E KA Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLDI--EQGDEVVLFSSETGLGKEEAWKA 119 Query: 206 I 206 I Sbjct: 120 I 120 >gi|71027011|ref|XP_763149.1| hypothetical protein [Theileria parva strain Muguga] gi|68350102|gb|EAN30866.1| hypothetical protein TP03_0131 [Theileria parva] Length = 410 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 20/213 (9%) Query: 10 SAWIFLRGVPEIGLL---------PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 S IF R P++ LL P+ PEI G S GKSSL+N ++N+ NL S Sbjct: 56 SPLIFNRYKPKVKLLASTLSSDSFPRNQIPEICIFGASKSGKSSLLNAILNKPNL---SK 112 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNV--DSWGGLIVRYLSER 118 +T L+FF + + + LVDMP P +N+ + + + YL R Sbjct: 113 VQFKTNKLHFFQVGGSNGI------VMLVDMPNCIKQNKPDENLKNEKILEICLNYLKYR 166 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 L ++ID G+ D + +F + +++ +VL K D P + ++ + + Sbjct: 167 ENLVLTIIIIDSLKGITSEDLHIINFCNHNRLNFLVVLNKSDLFKPVELTKKIQTMETQL 226 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++ ++P SS K + I L + + + IN Sbjct: 227 NSFKYKINNIVPVSSTKLQNINQLHQILTDFIN 259 >gi|229006806|ref|ZP_04164439.1| GTP-binding protein YihA [Bacillus mycoides Rock1-4] gi|228754428|gb|EEM03840.1| GTP-binding protein YihA [Bacillus mycoides Rock1-4] Length = 128 Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGRMIETYFTTREQLDAAVLVVDLRHPPTNDDVMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + EV+ SS G E KA Sbjct: 61 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLDI--EQGDEVVLFSSETGLGKEEAWKA 118 Query: 206 I 206 I Sbjct: 119 I 119 >gi|322698814|gb|EFY90581.1| GTP binding protein (EngB) [Metarhizium acridum CQMa 102] Length = 322 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 59/244 (24%), Positives = 94/244 (38%), Gaps = 37/244 (15%) Query: 1 MVSHTIFTKSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTS 59 + + F S FL + PEI G SNVGKS+ +N LV + AR S Sbjct: 55 LSAAEKFFSSPCKFLYSAEALRHHSANNVTPEIVVLGSSNVGKSTFLNALVGQSKAARVS 114 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNL---------PAMALVDMPGYGYARAPKKNVDSWGGL 110 PGRT +N + + +L ++ +VD PGYG+ K+ SWG Sbjct: 115 QKPGRTTLMNAYGVGPLPKIPRDLVPKGMPPPRHSLVVVDTPGYGF-----KSQASWGDA 169 Query: 111 IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK--------- 161 I++YL R LR +L+ + D+ + L + +VLTK DK Sbjct: 170 IMKYLQARRMLRGAVVLLSSEKRLLPEDRWMLRTLAEANTRTVVVLTKADKARNAWVETC 229 Query: 162 -----LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS--------VKRKGIEVLRKAILE 208 + ++ ++ A + T++ G+ +R AILE Sbjct: 230 SLLADVVQQEVDRLHKEFGGKWKDEEGAASRIYITAAGMESPGRLKNGGGLGGVRTAILE 289 Query: 209 TINY 212 + Sbjct: 290 MAGF 293 >gi|319403767|emb|CBI77351.1| GTP-binding protein (fragment) [Bartonella rochalimae ATCC BAA-1498] Length = 121 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 60/120 (50%), Positives = 82/120 (68%) Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 MPGYG+A APK +++W LI YL R+TL+ VY+LID RHG+K+ D D + LDK AV Sbjct: 1 MPGYGFAEAPKNLINAWTHLIFDYLRGRTTLKRVYVLIDSRHGIKKNDTDTLNLLDKAAV 60 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 SYQIVLTK DK+ T + + TK + +P A+PE++ TS+ K G+E LR AI++ I Sbjct: 61 SYQIVLTKSDKIKFNTLEALITMTKTKLLKHPAAYPEILVTSAEKASGLEELRAAIIQAI 120 >gi|71650509|ref|XP_813951.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70878882|gb|EAN92100.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 631 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 16/208 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAG--PPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +++ IF++ + I +P PE+A +GR NVGK+SL+ L S Sbjct: 86 LANEIFSRG-HKHVCCATNISFVPDGNAAMPEVALAGRGNVGKTSLLRSLFRASREVGRS 144 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N R +NFF +VD+PG+G P V L+ ++ R Sbjct: 145 NVKLRRDAMNFFNV--------GGGVFNVVDLPGFGGTSVPWSTVLQHAVLLRNFVQYRP 196 Query: 120 TLRCVYLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE--TLEKTK 175 +L+ +Y +D +HGV D D+ FL K+ ++ IVLTK D+L T + + LE + Sbjct: 197 SLKMLYYCMDVHYKHGVYIQDIDILRFLSKEVPNFTIVLTKGDQLDTTKSNDAFRLEDIR 256 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + HP V+ TS+ GI+ LR Sbjct: 257 RELLFHDITHP-VLVTSAYHMGGIDALR 283 >gi|219110105|ref|XP_002176804.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411339|gb|EEC51267.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 390 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 102/258 (39%), Gaps = 65/258 (25%) Query: 18 VPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILV-NRKNL------------------- 55 P PEI +GRSNVGKS+L+N L+ K+ Sbjct: 108 ATLDDHYPANHKNIPEIVLAGRSNVGKSTLLNALLYGNKHADAVVRQRVRGKTPESVKQP 167 Query: 56 ----ARTSNAPGRTQHLNFFVPKDFSNLKNN---LPAMALVDMPGYGYARAPKKNVDSWG 108 A TS+ PG T+ + F+ +N A+ LVD+PGYG+A A ++ + Sbjct: 168 KGMKATTSDKPGETRAITFYQLAARLERENGVFYDHALRLVDLPGYGFAYAKEEAARRYR 227 Query: 109 GLIVRYLSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAV---------------- 150 L+ YL +R L+ V LLID RHG+K+ D D L + + Sbjct: 228 ALMADYLLKRGNKYLKRVLLLIDARHGMKKADVDFLMDLQEHSRHLQENSRLDGKRKKNA 287 Query: 151 ---SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP---EVIPTSS----------- 193 Q+VLTK D ++ + + + + + P V+ S+ Sbjct: 288 QLPPIQLVLTKCDLVTRADLARRVAQVRSQLSDCFIREPSQLPVMLVSARAGVGYNNVVG 347 Query: 194 -VKRKGIEVLRKAILETI 210 R G+ L+K I+ + Sbjct: 348 DKARGGVLELQKEIVALV 365 >gi|154344861|ref|XP_001568372.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065709|emb|CAM43483.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 653 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 16/207 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTS 59 ++ IF+K + +G +P P P +A +GR GK+SL+ L S Sbjct: 79 LADQIFSKG-HRHVASATNVGFVPDGNPATPLVALAGRERCGKTSLLRALFRSPREVGRS 137 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N R +NFF N +VD+PG+G P V L+ + + Sbjct: 138 NRHLRRDAMNFF---------NVGGVFNVVDLPGFGGTSVPWTAVLQHAVLLRNFSRCQP 188 Query: 120 TLRCVYLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ-ETLEKTKY 176 +L+ +Y +D +HG+ D D+ FL ++ ++ IVLTK D+++ + +++ + Sbjct: 189 SLKMLYYCMDVHYKHGLYIQDIDLLRFLAREVPNFTIVLTKADQINDRAIRTAHMDEIRK 248 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + HP V+ TS+ GI+ LR Sbjct: 249 ELLYHDIHHP-VLVTSAFHMGGIDTLR 274 >gi|322818866|gb|EFZ26152.1| hypothetical protein TCSYLVIO_7681 [Trypanosoma cruzi] Length = 705 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 16/208 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAG--PPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +++ IF++ + I +P PE+A +GR NVGK+SL+ + S Sbjct: 161 LANEIFSRG-HKHVCCATNISFVPDGNAAMPEVALAGRGNVGKTSLLRSIFRASREVGRS 219 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N R +NFF +VD+PG+G P V L+ ++ R Sbjct: 220 NVKLRRDAMNFFNV--------GGGVFNVVDLPGFGGTSVPWSTVLQHAVLLRNFVQYRP 271 Query: 120 TLRCVYLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE--TLEKTK 175 +L+ +Y +D +HGV D D+ FL K+ ++ IVLTK D+L T +++ LE + Sbjct: 272 SLKMLYYCMDVHYKHGVYIQDIDILRFLSKEVPNFTIVLTKGDQLDTTKSKDAFRLEDIR 331 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + HP V+ TS+ GI+ LR Sbjct: 332 RELLFHDITHP-VLVTSAYHMGGIDALR 358 >gi|71424998|ref|XP_812979.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70877819|gb|EAN91128.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 630 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 16/208 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAG--PPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +++ IF++ + I +P PE+A +GR NVGK+SL+ L S Sbjct: 86 LANEIFSRG-HKHVCCATNISFVPDGNAAMPEVALAGRGNVGKTSLLRSLFRASREVGRS 144 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N R +NFF +VD+PG+G P V L+ ++ R Sbjct: 145 NVKLRRDAMNFFNV--------GGGVFNVVDLPGFGGTSVPWSTVLQHAVLLRNFVQYRP 196 Query: 120 TLRCVYLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE--TLEKTK 175 +L+ +Y +D +HGV D D+ FL K+ ++ IVLTK D+L T +++ LE + Sbjct: 197 SLKMLYYCMDVHYKHGVYIQDIDILRFLSKEVPNFTIVLTKGDQLDTTKSKDAFRLEDIR 256 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + HP ++ TS+ GI+ LR Sbjct: 257 RELLFHDITHP-LLVTSAYHMGGIDALR 283 >gi|229032123|ref|ZP_04188100.1| GTP-binding protein YihA [Bacillus cereus AH1271] gi|228729179|gb|EEL80178.1| GTP-binding protein YihA [Bacillus cereus AH1271] Length = 129 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTNDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + E++ SS G E KA Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSETGLGKEEAWKA 119 Query: 206 I 206 I Sbjct: 120 I 120 >gi|71745802|ref|XP_827531.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70831696|gb|EAN77201.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 634 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 16/208 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTS 59 ++ IF++ + I +P P PE+A +GR GKSSL+ L S Sbjct: 91 LADEIFSRG-HKHVCCATNISFVPDGNPAMPEVALAGRGQCGKSSLLRSLFRSSREVGRS 149 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N R +NFF +VD+PG+G P + L+ ++ R Sbjct: 150 NVKLRRDAMNFFNV--------GGGVFNIVDLPGFGGTSVPWSTLLQHAVLLRNFVRCRP 201 Query: 120 TLRCVYLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET--LEKTK 175 L+ +Y +D RHGV D D+ FL K+ ++ IV+TK D+L T ++ LE + Sbjct: 202 NLKMLYYCMDVHYRHGVYIQDLDLLRFLSKEVPNFTIVVTKGDQLDTTKSRNVFRLEDIR 261 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + HP V+ TS+ G++ LR Sbjct: 262 KELLFHDITHP-VLVTSAYHMGGVDALR 288 >gi|261331731|emb|CBH14725.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 634 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 16/208 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTS 59 ++ IF++ + I +P + P PE+A +GR GKSSL+ L S Sbjct: 91 LADEIFSRG-HKHVCCATNISFVPDSNPAMPEVALAGRGQCGKSSLLRSLFRSSREVGRS 149 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N R +NFF +VD+PG+G P + L+ ++ R Sbjct: 150 NVKLRRDAMNFFNV--------GGGVFNIVDLPGFGGTSVPWSTLLQHAVLLRNFVRCRP 201 Query: 120 TLRCVYLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQET--LEKTK 175 L+ +Y +D RHGV D D+ FL K+ ++ IV+TK D+L T ++ LE + Sbjct: 202 NLKMLYYCMDVHYRHGVYIQDLDLLRFLSKEVPNFTIVVTKGDQLDTTKSRNVFRLEDIR 261 Query: 176 YLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + HP V+ TS+ G++ LR Sbjct: 262 KELLFHDITHP-VLVTSAYHMGGVDALR 288 >gi|85000233|ref|XP_954835.1| hypothetical protein [Theileria annulata strain Ankara] gi|65302981|emb|CAI75359.1| hypothetical protein, conserved [Theileria annulata] Length = 410 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 20/213 (9%) Query: 10 SAWIFLRGVPEIGLL---------PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSN 60 S IF R P++ LL P+ PEI G + GKSSL+N ++N+ NL S Sbjct: 56 SPLIFNRYKPKVKLLASTLSCDSFPRNHIPEICIFGAAKSGKSSLLNAILNKPNL---SK 112 Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNV--DSWGGLIVRYLSER 118 +T L+FF + + + LVDMP P++N+ + + + YL R Sbjct: 113 TQFKTSKLHFFKVGGSNGI------VMLVDMPNCIKHNKPEENLKNEKILEICLNYLKYR 166 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 L ++ID G+ D + +F + +++ +VL K D P + ++ + + Sbjct: 167 QNLLLTIIIIDSLKGITSEDLHLINFCNHNRLNFLVVLNKSDLFKPVELTKKIQTMENQL 226 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 ++ +IP SS K + I L + + + IN Sbjct: 227 ISFKYKINNIIPVSSTKLQNINQLHQILTDFIN 259 >gi|229025933|ref|ZP_04182325.1| GTP-binding protein YihA [Bacillus cereus AH1272] gi|228735379|gb|EEL85982.1| GTP-binding protein YihA [Bacillus cereus AH1272] Length = 129 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH + D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTKDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + E++ SS G E KA Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSETGLGKEEAWKA 119 Query: 206 I 206 I Sbjct: 120 I 120 >gi|229019694|ref|ZP_04176501.1| GTP-binding protein YihA [Bacillus cereus AH1273] gi|228741601|gb|EEL91794.1| GTP-binding protein YihA [Bacillus cereus AH1273] Length = 128 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH + D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTKDDVMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + E++ SS G E KA Sbjct: 61 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSETGLGKEEAWKA 118 Query: 206 I 206 I Sbjct: 119 I 119 >gi|302660413|ref|XP_003021886.1| GTP binding protein (EngB), putative [Trichophyton verrucosum HKI 0517] gi|291185805|gb|EFE41268.1| GTP binding protein (EngB), putative [Trichophyton verrucosum HKI 0517] Length = 343 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 60/256 (23%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + + L +P++ PE+ F GRSNVGKSS+IN+LV ++ TS PGRTQ Sbjct: 86 SKHSPVHLWTTNLFRKIPESDIPEVVFMGRSNVGKSSVINMLVGE-DICYTSATPGRTQT 144 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST------- 120 +N F K + ++D PGYG A P+ WG +++YLS+R Sbjct: 145 MNAFGIG---GTKGGETKINIIDSPGYGKASRPE-----WGHELMKYLSKRQQYVDSRFH 196 Query: 121 ----------------LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL-- 162 LR V+L+I+C+ GVK D++V S L + V +QI+++K D Sbjct: 197 SNSNCGILLTIPNLDRLRRVFLIIECKAGVKNSDKEVLSILREFTVPHQIIVSKADNFIT 256 Query: 163 -------------SPTTAQETLEKTKYLIRNYPTAHPE----VIPTS---------SVKR 196 S ++ + + + + ++ S + Sbjct: 257 EGRAGNQEAHRAASLKQFRQIISRIRKEVTPTLEEGIPPLGDILACSNKIRIGEGHNKHP 316 Query: 197 KGIEVLRKAILETINY 212 GI+ L+ +IL+ + Sbjct: 317 LGIDALQWSILQAAGF 332 >gi|322495522|emb|CBZ30827.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 620 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 16/207 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTS 59 ++ IF+K + +G +P P P IA +GR GK+SL+ L S Sbjct: 52 LADQIFSKG-HRHVASAMNVGFVPDGNPATPLIALAGRERCGKTSLLRSLFRSAREVGRS 110 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N R +NFF N +VD+PG G P V L+ + + Sbjct: 111 NRHLRRDAMNFF---------NVGGVFNVVDLPGCGGTSVPWSAVLQHAVLLRNFARCQP 161 Query: 120 TLRCVYLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-TLEKTKY 176 +L+ +Y +D +HG+ D D+ FL ++ ++ IVLTK D+++ Q +E + Sbjct: 162 SLKMLYYCMDTHYKHGLYIQDIDLLQFLAREVPNFTIVLTKADQINDRAIQTVHMEDIRK 221 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + HP V+ TS+ GI+ LR Sbjct: 222 ELIYHDIHHP-VLVTSAFHMGGIDTLR 247 >gi|229163425|ref|ZP_04291376.1| GTP-binding protein YihA [Bacillus cereus R309803] gi|228619994|gb|EEK76869.1| GTP-binding protein YihA [Bacillus cereus R309803] Length = 129 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKSERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTNDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + E++ SS G E KA Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSETGLGKEEAWKA 119 Query: 206 I 206 I Sbjct: 120 I 120 >gi|302686154|ref|XP_003032757.1| hypothetical protein SCHCODRAFT_53778 [Schizophyllum commune H4-8] gi|300106451|gb|EFI97854.1| hypothetical protein SCHCODRAFT_53778 [Schizophyllum commune H4-8] Length = 242 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 26/214 (12%) Query: 10 SAWIFLRGVPEIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL 68 + F+ I +PK G PE+ GR+N GKSSL N +V RK+L TS+ PGRT+ L Sbjct: 40 ANARFVAAAGSISNIPKLEGRPEVRSVGRANSGKSSLFNAVVGRKDLLHTSSKPGRTKEL 99 Query: 69 NFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLI 128 NF+ + LVD PGYG P+ WG L Y+S R LR +Y+L Sbjct: 100 NFYSVGADPGH------LVLVDAPGYGARGRPE-----WGELFDHYISTRKQLRRIYILF 148 Query: 129 DCRHGVKQIDQDVFSFLDKKAV------SYQI--VLTKIDKLSPTTAQETLEKTKYLI-R 179 + +H + D + + L K + + + ++TK+D + ET+ K + I + Sbjct: 149 NAKHDLNDYDLGMLANLSDKLINAEGRQPFTLQAIITKVDSIPSGKEGETIRKLRQDIFK 208 Query: 180 NYPTAHPEVIPTSSVKRK---GIEVLRKAILETI 210 P P ++ SV G+ +R I++ Sbjct: 209 AAPLCMPPLLT--SVTMHPPFGVGTVRSNIIDAC 240 >gi|302504401|ref|XP_003014159.1| GTP binding protein (EngB), putative [Arthroderma benhamiae CBS 112371] gi|291177727|gb|EFE33519.1| GTP binding protein (EngB), putative [Arthroderma benhamiae CBS 112371] Length = 343 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 60/256 (23%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + + L +P++ PE+ F GRSNVGKSS+IN+LV ++ TS PGRTQ Sbjct: 86 SKHSPVHLWTTNLFRKIPESDVPEVVFMGRSNVGKSSVINMLVGE-DICYTSATPGRTQT 144 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST------- 120 +N F K + ++D PGYG A P+ WG +++YLS+R Sbjct: 145 MNAFGIG---GTKGGETKINIIDSPGYGKASRPE-----WGHELMKYLSKRQQYVGSRSR 196 Query: 121 ----------------LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL-- 162 LR V+L+I+C+ GVK D++V S L + V +QI+++K D Sbjct: 197 SDSNCEILLTIPNLDRLRRVFLIIECKAGVKNSDKEVLSILREFTVPHQIIVSKADNFIT 256 Query: 163 -------------SPTTAQETLEKTKYLIRNYPTAHPE----VIPTS---------SVKR 196 S ++ + + + + ++ S + Sbjct: 257 EGRAGNQEAHRTASLKQFRQIISRIRKEVTPTLEEGIPPLGDILACSNKIRIGEGHNKHP 316 Query: 197 KGIEVLRKAILETINY 212 GI+ L+ +IL+ + Sbjct: 317 LGIDALQWSILQAAGF 332 >gi|212534274|ref|XP_002147293.1| GTP binding protein (EngB), putative [Penicillium marneffei ATCC 18224] gi|210069692|gb|EEA23782.1| GTP binding protein (EngB), putative [Penicillium marneffei ATCC 18224] Length = 338 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 58/254 (22%) Query: 8 TKSAWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 T+ + + L + +P + PE+AF G++NVGKSSLIN LV+ + + R+ + G+T Sbjct: 84 TRHSPVKLYSAAQFRTIPFDSKEPEVAFLGKTNVGKSSLINALVDDE-ICRSGDKRGKTT 142 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 +N + K + L+DMPGYG ++ G I++YL +R LR ++ Sbjct: 143 EMNAYGIG---GTKGGESKIVLLDMPGYGAGSKLEQ-----GEEIMKYLQKRKQLRRTFI 194 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK--------------------LSPTT 166 LID HG+K DQ + + L + A+ +Q+V++K+D+ + Sbjct: 195 LIDLIHGIKSHDQQILTLLRQYAIPHQLVVSKVDRVLCDRVQTIKHWHYERTVRIVKLAG 254 Query: 167 AQETLEKTKYL-------------------IRNYPTAHPEVIPTSSVK---------RKG 198 Q L++ + + P E+I S++K Sbjct: 255 LQRQLDELRTMDQIPSDPNSPRYELATQLAATKGPPPLGEIIAVSAMKDVAKNMKKSYLN 314 Query: 199 IEVLRKAILETINY 212 I+ LR +I++ + Sbjct: 315 IDALRWSIMQATGF 328 >gi|229141210|ref|ZP_04269749.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST26] gi|228642251|gb|EEK98543.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST26] Length = 129 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + + EV+ SS G E KA Sbjct: 62 KHYDIPTIIIATKADKIPKGKWQKHLKVVKETLDI--ESGDEVVLFSSETGLGKEEAWKA 119 Query: 206 I 206 I Sbjct: 120 I 120 >gi|260812217|ref|XP_002600817.1| hypothetical protein BRAFLDRAFT_263736 [Branchiostoma floridae] gi|229286107|gb|EEN56829.1| hypothetical protein BRAFLDRAFT_263736 [Branchiostoma floridae] Length = 174 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 17/180 (9%) Query: 32 IAFSGRSNVGKSSLINILVNR--KNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 IA GRSNVGKS+L+ L + +TS PG T+ NFF AM LV Sbjct: 3 IAIMGRSNVGKSTLLQCLFREVPDLVVKTSKTPGHTKMANFFRVG---------SAMTLV 53 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DMPGYGY + + ++ YL +R LR ++D G+ D +++ Sbjct: 54 DMPGYGYRQPAD-----FVHIVEDYLLQRKNLRMAVFMVDGAAGISSWDTVAIEMIEEFK 108 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVLRKAILE 208 Y +V+TKIDK+S + + + +I+ P+V S + G+ +L+ + Sbjct: 109 RPYVLVMTKIDKVSHHVLVKNVLAVRQVIKERTKACLPQVFLVSGMTGDGVPLLQYFFAQ 168 >gi|228935788|ref|ZP_04098600.1| GTP-binding protein YihA [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228948183|ref|ZP_04110467.1| GTP-binding protein YihA [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229186711|ref|ZP_04313869.1| GTP-binding protein YihA [Bacillus cereus BGSC 6E1] gi|228596724|gb|EEK54386.1| GTP-binding protein YihA [Bacillus cereus BGSC 6E1] gi|228811541|gb|EEM57878.1| GTP-binding protein YihA [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823845|gb|EEM69665.1| GTP-binding protein YihA [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 128 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + + EV+ SS G E KA Sbjct: 61 KHYDIPTIIIATKADKIPKGKWQKHLKVVKETLDI--ESGDEVVLFSSETGLGKEEAWKA 118 Query: 206 I 206 I Sbjct: 119 I 119 >gi|229175151|ref|ZP_04302667.1| GTP-binding protein YihA [Bacillus cereus MM3] gi|228608287|gb|EEK65593.1| GTP-binding protein YihA [Bacillus cereus MM3] Length = 128 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTNDDVMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + E++ SS G E KA Sbjct: 61 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSETGLGKEEAWKA 118 Query: 206 I 206 I Sbjct: 119 I 119 >gi|146101235|ref|XP_001469063.1| hypothetical protein [Leishmania infantum] gi|134073432|emb|CAM72160.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 620 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 16/207 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTS 59 ++ IF+K + IG +P P P +A +GR GK+SL+ L S Sbjct: 52 LADQIFSKG-HRHVASAMNIGFVPDGNPATPLVALAGRERCGKTSLLRSLFRSAREVGRS 110 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N R +NFF N +VD+PG G P V L+ + + Sbjct: 111 NRHLRRDAMNFF---------NVGGVFNVVDLPGCGGTSVPWSTVLQHAVLLRNFARCQP 161 Query: 120 TLRCVYLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-TLEKTKY 176 +L+ +Y +D +HG+ D D+ FL ++ ++ IVLTK D+++ + +E + Sbjct: 162 SLKMLYYCMDTHYKHGLYIQDIDLLQFLAREVPNFTIVLTKADQINDRALRAVHMEDIRK 221 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + HP V+ TS+ G++ LR Sbjct: 222 ELIYHDIHHP-VLVTSAFHMGGVDTLR 247 >gi|229098943|ref|ZP_04229878.1| GTP-binding protein YihA [Bacillus cereus Rock3-29] gi|229117972|ref|ZP_04247332.1| GTP-binding protein YihA [Bacillus cereus Rock1-3] gi|228665421|gb|EEL20903.1| GTP-binding protein YihA [Bacillus cereus Rock1-3] gi|228684441|gb|EEL38384.1| GTP-binding protein YihA [Bacillus cereus Rock3-29] Length = 129 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTNDDVMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + E++ SS G E KA Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSETGLGKEEAWKA 119 Query: 206 I 206 I Sbjct: 120 I 120 >gi|229105108|ref|ZP_04235759.1| GTP-binding protein YihA [Bacillus cereus Rock3-28] gi|228678289|gb|EEL32515.1| GTP-binding protein YihA [Bacillus cereus Rock3-28] Length = 128 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 56/121 (46%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHQPTNDDVMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + E++ SS G E KA Sbjct: 61 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSETGLGKEEAWKA 118 Query: 206 I 206 I Sbjct: 119 I 119 >gi|322503096|emb|CBZ38180.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 620 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 16/207 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTS 59 ++ IF+K + IG +P P P +A +GR GK+SL+ L S Sbjct: 52 LADQIFSKG-HRHVASAMNIGFVPDGNPATPLVALAGRERCGKTSLLRSLFRSAREVGRS 110 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N R +NFF N +VD+PG G P V L+ + + Sbjct: 111 NRHLRRDAMNFF---------NVGGVFNVVDLPGCGGTSVPWSTVLQHAVLLRNFSRCQP 161 Query: 120 TLRCVYLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-TLEKTKY 176 +L+ +Y +D +HG+ D D+ FL ++ ++ IVLTK D+++ + +E + Sbjct: 162 SLKMLYYCMDTHYKHGLYIQDIDLLQFLAREVPNFTIVLTKADQINDRALRAVHMEDIRK 221 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + HP V+ TS+ G++ LR Sbjct: 222 ELIYHDIHHP-VLVTSAFHMGGVDTLR 247 >gi|326484419|gb|EGE08429.1| GTP binding protein [Trichophyton equinum CBS 127.97] Length = 343 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 60/256 (23%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 +K + + L +P++ PE+ F GRSNVGKSS+IN+LV ++ TS PGRTQ Sbjct: 86 SKHSPVHLWTTNLFRKIPESDIPEVVFMGRSNVGKSSVINMLVGE-DICYTSATPGRTQT 144 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST------- 120 +N F +K + ++D PGYG A P+ WG +++YLS+R Sbjct: 145 MNAFGVG---GMKGGETKINIIDSPGYGKASRPE-----WGHELMKYLSKRQQYVGSRFR 196 Query: 121 ----------------LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL-- 162 LR V+L+I+C+ GVK D++V S L + V +QI+++K D Sbjct: 197 FNSSRGILLTISNLDKLRRVFLIIECKAGVKNSDKEVLSILREFTVPHQIIVSKADNFIT 256 Query: 163 -------------SPTTAQETLEKTKYLIRNYPTAHPE----VIPTS---------SVKR 196 S ++ + + + + ++ S + Sbjct: 257 EDRAGNHEAHRTASLKQFRQIISRIRKEVTPTLEEGIPPLGDILACSNKIRIGEGHNKHP 316 Query: 197 KGIEVLRKAILETINY 212 GI+ L+ +IL+ + Sbjct: 317 LGIDALQWSILQAAGF 332 >gi|229062164|ref|ZP_04199488.1| GTP-binding protein YihA [Bacillus cereus AH603] gi|228717147|gb|EEL68823.1| GTP-binding protein YihA [Bacillus cereus AH603] Length = 129 Score = 141 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R+ L L++D RH + D ++ FL Sbjct: 2 MHFVDVPGYGYAKVSKTERAAWGRMIETYFTTRTQLDAAVLVVDLRHQPTKDDIMMYDFL 61 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + E++ SS G E KA Sbjct: 62 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSETGLGKEEAWKA 119 Query: 206 I 206 I Sbjct: 120 I 120 >gi|229013685|ref|ZP_04170814.1| GTP-binding protein YihA [Bacillus mycoides DSM 2048] gi|229135315|ref|ZP_04264109.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST196] gi|229169212|ref|ZP_04296926.1| GTP-binding protein YihA [Bacillus cereus AH621] gi|228614278|gb|EEK71389.1| GTP-binding protein YihA [Bacillus cereus AH621] gi|228648138|gb|EEL04179.1| GTP-binding protein YihA [Bacillus cereus BDRD-ST196] gi|228747607|gb|EEL97481.1| GTP-binding protein YihA [Bacillus mycoides DSM 2048] Length = 128 Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 2/121 (1%) Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M VD+PGYGYA+ K +WG +I Y + R+ L L++D RH + D ++ FL Sbjct: 1 MHFVDVPGYGYAKVSKTERAAWGRMIETYFTTRTQLDAAVLVVDLRHQPTKDDIMMYDFL 60 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I+ TK DK+ Q+ L+ K + E++ SS G E KA Sbjct: 61 KHYEIPTIIIATKADKIPKGKWQKHLKVVKETLA--VEIGDEIVLFSSETGLGKEEAWKA 118 Query: 206 I 206 I Sbjct: 119 I 119 >gi|72548359|ref|XP_843381.1| hypothetical protein [Leishmania major strain Friedlin] gi|323363898|emb|CBZ12904.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 620 Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 16/207 (7%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGP--PEIAFSGRSNVGKSSLINILVNRKNLARTS 59 ++ IF+K + IG +P P P +A +GR GK+SL+ L S Sbjct: 52 LADQIFSKG-HRHVASAMNIGFVPDGNPATPLVALAGREKCGKTSLLRSLFRSAREVGRS 110 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N R +NFF N +VD+PG G P V L+ + + Sbjct: 111 NRHLRRDAMNFF---------NVGGVFNVVDLPGCGGTSVPWSTVLQHAVLLRNFARCQP 161 Query: 120 TLRCVYLLIDC--RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-TLEKTKY 176 +L+ +Y +D +HG+ D D+ FL ++ ++ IVLTK D+++ + +E + Sbjct: 162 SLKMLYYCMDTHYKHGLYIQDIDLLQFLAREVPNFTIVLTKADQINDRAIRTVHMEDIRK 221 Query: 177 LIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + HP V+ TS+ GI+ LR Sbjct: 222 ELIYHGIHHP-VLVTSAFHMGGIDTLR 247 >gi|321309633|ref|YP_004191962.1| GTP binding protein EngB [Mycoplasma haemofelis str. Langford 1] gi|319801477|emb|CBY92123.1| GTP binding protein EngB [Mycoplasma haemofelis str. Langford 1] Length = 183 Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 17/197 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F+ + P PE G SN GKS+LIN L + +A+TS +PG+T+ +NF+ Sbjct: 4 FMAASRDAKDYPMHSMPEFFLIGPSNAGKSTLINSLA-KAKIAKTSKSPGKTRTINFY-- 60 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + LVDMPGYG+ R ++ +I YL+ER L V I HG Sbjct: 61 --------DFDKFCLVDMPGYGFDRKGREG--DLLKVINEYLTERPNLIGVVQ-ICSPHG 109 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + Q D +V ++L + +Y ++L KIDKLS + L K ++ ++ S Sbjct: 110 LSQNDLEVKNYLFSRFHNYLLLLNKIDKLSNSQR---LLAKKQIVTESQLQEGNILLISG 166 Query: 194 VKRKGIEVLRKAILETI 210 + + VL + ++ I Sbjct: 167 KTSENLNVLVRTLISWI 183 >gi|71667548|ref|XP_820722.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70886078|gb|EAN98871.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 660 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 21/184 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S +F+K + L+ V + LP+ PE+ F G+ NVGKSS+I+ L++ + L R+ Sbjct: 49 LSDEVFSKGN-VHLKNVNTLSALPEGLHSFPEVCFIGKPNVGKSSIISCLLHNRRLGRSG 107 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPK-----KNVDSWGGLIVRY 114 + G T+ L FF D AM LVD PGYG + S ++ RY Sbjct: 108 STRGTTRILQFFNVGD---------AMLLVDTPGYGGWMGRQLSQNLAERASAFAILFRY 158 Query: 115 LSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS--PTTAQET 170 L+ R L+ VY +++ R ++ D+++F+FL ++ +++ ++L KID+ Q+ Sbjct: 159 LALRKQGPLKRVYWVMEARKPIQPRDEEIFAFLREQQINFSVILNKIDRFKGDKVALQKQ 218 Query: 171 LEKT 174 + Sbjct: 219 VNDV 222 >gi|71414564|ref|XP_809380.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70873752|gb|EAN87529.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 660 Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 21/184 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S +F+K + L+ V + LP+ PE+ F G+ NVGKSS+I+ L++ + L R+ Sbjct: 49 LSDEVFSKGN-VHLKNVNTLSALPEGLHSFPEVCFIGKPNVGKSSIISCLLHNRRLGRSG 107 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPK-----KNVDSWGGLIVRY 114 + G T+ L FF D AM LVD PGYG + S ++ RY Sbjct: 108 STRGTTRILQFFNVGD---------AMLLVDTPGYGGWMGRQLSQNLAERASAFAILFRY 158 Query: 115 LSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS--PTTAQET 170 L+ R L+ VY +++ R ++ D+++F+FL ++ +++ ++L KID+ Q+ Sbjct: 159 LALRKQGPLKRVYWVMEARKPIQPRDEEIFAFLREQQINFSVILNKIDRFKGDKVALQKQ 218 Query: 171 LEKT 174 + Sbjct: 219 VNDV 222 >gi|322411596|gb|EFY02504.1| ribosome biogenesis GTP-binding protein YsxC [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 120 Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 58/122 (47%), Gaps = 2/122 (1%) Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D+PGYGYA+ K WG +I YL+ R LR V L+D RH + D ++ FL Sbjct: 1 MDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHESSKEDVQMYEFLKYY 60 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + IV TK DK+ + K + T H I SSV R GI+ ILE Sbjct: 61 DIPVIIVATKADKIPRGKWNKHESMVKKTLGFDKTDH--FIIFSSVDRVGIDEAWDTILE 118 Query: 209 TI 210 + Sbjct: 119 YL 120 >gi|315926768|gb|EFV06142.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 146 Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 2/143 (1%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + F+ + + + E+AF GRSNVGKSSLIN L +KNLA++S PG+TQ +NF Sbjct: 4 SAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQLINF 63 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 F + +D+PG+GYA+ K + W + +L R++++ LID Sbjct: 64 FEV--ICRRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHLIDS 121 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQ 153 RH +ID ++ +L + Q Sbjct: 122 RHTHLEIDVNLNDYLKRFLRPDQ 144 >gi|228917107|ref|ZP_04080665.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929516|ref|ZP_04092535.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229093566|ref|ZP_04224667.1| GTP-binding protein YihA [Bacillus cereus Rock3-42] gi|229124009|ref|ZP_04253201.1| GTP-binding protein YihA [Bacillus cereus 95/8201] gi|229198598|ref|ZP_04325300.1| GTP-binding protein YihA [Bacillus cereus m1293] gi|228584880|gb|EEK42996.1| GTP-binding protein YihA [Bacillus cereus m1293] gi|228659311|gb|EEL14959.1| GTP-binding protein YihA [Bacillus cereus 95/8201] gi|228689775|gb|EEL43581.1| GTP-binding protein YihA [Bacillus cereus Rock3-42] gi|228830095|gb|EEM75713.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842525|gb|EEM87615.1| GTP-binding protein YihA [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 125 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDFLKHY 60 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I+ TK DK+ Q+ L+ K + + EV+ SS G E KAI Sbjct: 61 DIPTIIIATKADKIPKGKWQKHLKVVKETLDI--ESGDEVVLFSSETGLGKEEAWKAI 116 >gi|156837576|ref|XP_001642810.1| hypothetical protein Kpol_365p8 [Vanderwaltozyma polyspora DSM 70294] gi|156113381|gb|EDO14952.1| hypothetical protein Kpol_365p8 [Vanderwaltozyma polyspora DSM 70294] Length = 334 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 30/194 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNR------KNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 PEIAF G SNVGKSSL+N L+ +A S PG T+ LNFF N Sbjct: 143 LPEIAFLGSSNVGKSSLLNSLLTNYQKSTLDKIAWASKRPGFTKSLNFF---------NI 193 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 LVD PGYGY ++ G L + YL R L +LLI G+ D ++ Sbjct: 194 GNRFRLVDTPGYGYNSTSRQ-----GNLTLHYLKNRKELIKCFLLISAEKGLNGNDMNMI 248 Query: 143 SFLDKKAVSYQIVLTKIDKLSP-TTAQETLEKTKYLIRNYPTAHPEVIPTSSV------K 195 F+ + V +++V TK+DKL T ++ +E I +P++ P+++ T+S K Sbjct: 249 EFMAENGVPFELVFTKMDKLKNVTMLEKQIED--NNIMKFPSS-PQLLFTNSEVSKKCRK 305 Query: 196 RKGIEVLRKAILET 209 R G++ +R +L++ Sbjct: 306 RYGVDYVRLLVLQS 319 >gi|50293963|ref|XP_449393.1| hypothetical protein [Candida glabrata CBS 138] gi|49528707|emb|CAG62369.1| unnamed protein product [Candida glabrata] Length = 328 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 28/197 (14%) Query: 27 AGPPEIAFSGRSNVGKSSLINIL---VNRKNL---ARTSNAPGRTQHLNFFVPKDFSNLK 80 PEIAF G++NVGKS+++N L +K+L AR SN G T+ LN + Sbjct: 136 NPLPEIAFLGKTNVGKSTILNNLITSFKQKDLDVHARMSNRAGFTKTLNCY--------- 186 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 N ++D PGYG+ A ++ G + + YLS R L+ +LLI + + + D+ Sbjct: 187 NVGNKFRIIDTPGYGFHSAIEQ-----GNVTLDYLSNRKELKRCFLLISAKKEISEHDRY 241 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS------V 194 + + + + ++++ +K+DK+ T E ++ P++I T+S Sbjct: 242 LMDLMTESGIPFELIFSKMDKV--TDVDEFVQWIDSSGLRNLPTLPKLIFTNSMVSKFIK 299 Query: 195 KRKGIEVLRKAILETIN 211 KR G+++LR +I E N Sbjct: 300 KRYGVDLLRYSIFEACN 316 >gi|228987721|ref|ZP_04147832.1| GTP-binding protein YihA [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771995|gb|EEM20450.1| GTP-binding protein YihA [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 135 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D+PGYGYA+ K +WG +I Y + R L L++D RH D ++ FL Sbjct: 1 MDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVVDLRHKPTNDDVMMYDFLKHY 60 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I+ TK DK+ Q+ L+ K + + EV+ SS G E KAI Sbjct: 61 DIPTIIIATKADKIPKGKWQKHLKVVKETLDI--ESGDEVVLFSSETGLGKEEAWKAI 116 >gi|45190512|ref|NP_984766.1| AEL095Cp [Ashbya gossypii ATCC 10895] gi|44983454|gb|AAS52590.1| AEL095Cp [Ashbya gossypii ATCC 10895] Length = 358 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 28/202 (13%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNR------KNLARTSNAPGRTQHLNFFVPKD 75 L PEI F GRSN GKS+L+N L A TS G T+ L + Sbjct: 160 SFLLHDELPEIIFLGRSNAGKSTLLNNLTTNFKQVQLNRHATTSKKAGHTRALYCY---- 215 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 N + LVD PGYG G ++Y+ ER LR ++LI + G Sbjct: 216 -----NVGNRLRLVDSPGYGVMS-----TQQQGECTMQYIRERKQLRRCFMLISAKDGFT 265 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV- 194 + D + FL ++++++ TK+DK+ T ++ P ++ +SV Sbjct: 266 KTDYGMLEFLMNYGIAFEVIFTKMDKVRDVKTLRDSISTSGILD--APIRPRLMFLNSVV 323 Query: 195 -----KRKGIEVLRKAILETIN 211 KR GI LR+ I E N Sbjct: 324 NKAYPKRLGIAHLRQTIFEACN 345 >gi|322822159|gb|EFZ28291.1| hypothetical protein TCSYLVIO_5483 [Trypanosoma cruzi] Length = 367 Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 95/184 (51%), Gaps = 21/184 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S +F+K + L+ V + LP+ PE+ F G+ NVGKSS+I+ L++ + L R+ Sbjct: 49 LSDEVFSKGN-VHLKNVNTLSALPEGLHSFPEVCFIGKPNVGKSSIISCLLHNRRLGRSG 107 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPK-----KNVDSWGGLIVRY 114 + G T+ L FF D A+ LVD PGYG + S ++ RY Sbjct: 108 STRGTTRILQFFNVGD---------AILLVDTPGYGGWMGRQLSQNLAERASAFAILFRY 158 Query: 115 LSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS--PTTAQET 170 L+ R L+ VY +++ R ++ D+++F+FL ++ +++ ++L KID+ Q+ Sbjct: 159 LALRKQGPLKRVYWVMEARKPIQPRDEEIFAFLREQQINFSVILNKIDRFKGDKVALQKQ 218 Query: 171 LEKT 174 + Sbjct: 219 VNDV 222 >gi|221506491|gb|EEE32108.1| conserved hypothetical protein [Toxoplasma gondii VEG] Length = 710 Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 56/219 (25%), Positives = 89/219 (40%), Gaps = 55/219 (25%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILV--------NRKNL--ARTSNAPGRTQHLNFFVP 73 LP G PE+AF GRSNVGKSSL+N L R L AR S PG T+ +N + Sbjct: 255 LPSLGLPEVAFLGRSNVGKSSLLNALCLYTQKKHRGRTRLEMARVSRRPGSTRSINLYEA 314 Query: 74 ----------------------------------KDFSNLKNNLPAMA--------LVDM 91 K + +P A D+ Sbjct: 315 FGGCASEGSLERKGKRSRTRKSTGHTTRDRQLPRKQQGKHPSGVPLTATGNRGLLLFADL 374 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PGYG+AR + + Y+ +R+ LR +L+D R G++ D ++ +L ++V Sbjct: 375 PGYGFARGLSGEESQQLSKNVRLYVEKRNELRLFLVLVDGRLGLQDHDAEMLRWLAAQSV 434 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +V+TK D L + L + + + + + P ++ Sbjct: 435 PTLLVVTKADCLGAKDLENLLNQLSFYPKLF--SLPPIL 471 >gi|320593609|gb|EFX06018.1| GTP-binding protein [Grosmannia clavigera kw1407] Length = 535 Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats. Identities = 67/217 (30%), Positives = 84/217 (38%), Gaps = 62/217 (28%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAG-PPEIAFSGRSNVGKSSLINILVN---------- 51 + +F + A FL P LP PEI GRSNVGKS+L+N L Sbjct: 138 ATALFLQPAPRFLYSAPRFLHLPVNTRMPEICILGRSNVGKSTLLNALAGLETGGRAGRS 197 Query: 52 ------RKNLARTSNAPGRTQHLNFF----------------VPKDFSNLKNNLPAMA-- 87 R LA TS G T +N + SN KNN A A Sbjct: 198 HGARPGRLGLAITSAHAGCTVMMNGYGFGPPLRPGTVVFDSREGDTNSNKKNNKSATATT 257 Query: 88 ----------------------LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVY 125 L+DMPGYG+ + WG I +YL R+TLR Sbjct: 258 LASRSQRRAQKPGEPSPAHSLVLLDMPGYGFMSRSE-----WGTEIAKYLQRRTTLRGAV 312 Query: 126 LLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 LL+D G+K D+ + L V +VLTK DKL Sbjct: 313 LLVDAVAGIKDGDRQALAMLRDANVRTTVVLTKADKL 349 >gi|221486788|gb|EEE25034.1| conserved hypothetical protein [Toxoplasma gondii GT1] Length = 708 Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 89/219 (40%), Gaps = 55/219 (25%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILV--------NRKNL--ARTSNAPGRTQHLNFFVP 73 LP G PE+AF GRSNVGKSSL+N L R L AR S PG T+ +N + Sbjct: 253 LPSLGLPEVAFLGRSNVGKSSLLNALCLYTQKKHRGRTRLEMARVSRRPGSTRSINLYEA 312 Query: 74 ----------------------------------KDFSNLKNNLPAMA--------LVDM 91 K + +P A D+ Sbjct: 313 FGGCASEGSLERKGKRSRTRKSTGHTTRDRQLPRKQQGKHPSGVPLTATGNRGLLLFADL 372 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PGYG+A+ + + Y+ +R+ LR +L+D R G++ D ++ +L ++V Sbjct: 373 PGYGFAQGLSGEESQQLSKNVRLYVEKRNELRLFLVLVDGRLGLQDHDAEMLRWLAAQSV 432 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +V+TK D L + L + + + + + P ++ Sbjct: 433 PTLLVVTKADCLGAKDLENLLNQLSFYPKLF--SLPPIL 469 >gi|145627916|ref|ZP_01783717.1| GTP-binding protein [Haemophilus influenzae 22.1-21] gi|144979691|gb|EDJ89350.1| GTP-binding protein [Haemophilus influenzae 22.1-21] Length = 140 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 1/129 (0%) Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 NL P LVD+PGYGYA P++ W + +YL +R L + +L+D RH +K + Sbjct: 3 NLFEVEPNCKLVDLPGYGYAAVPEQMKIQWQKSLGKYLQKRECLAGLVVLMDIRHPLKDL 62 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + + ++LTK DKLS + + ++ + I + +V S+ + Sbjct: 63 DQQMIEWAVSANLPILLLLTKADKLSQSARSKQVKMVREAILPFQ-GDIQVEAFSAQNKI 121 Query: 198 GIEVLRKAI 206 GI+ L + Sbjct: 122 GIDKLAAKL 130 >gi|116202801|ref|XP_001227212.1| hypothetical protein CHGG_09285 [Chaetomium globosum CBS 148.51] gi|88177803|gb|EAQ85271.1| hypothetical protein CHGG_09285 [Chaetomium globosum CBS 148.51] Length = 288 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 65/228 (28%), Positives = 83/228 (36%), Gaps = 54/228 (23%) Query: 10 SAWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVN------RK--------- 53 + FL +P PEI GRSNVGKS+LIN L RK Sbjct: 15 NPPRFLYSASRFLTIPVNTHTPEICLIGRSNVGKSTLINALSGADAETARKAHGLRARGA 74 Query: 54 NLARTSNAPGRTQHLNFF-------------------------------VPKDFSNLKNN 82 LA TS G T+ LN + V + + Sbjct: 75 GLAITSRTAGSTKSLNAYGFGPPTKQQRLAALQAAKEAKDAEDAVASRGVRRAAREKREP 134 Query: 83 LPAMAL--VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 P L VDMPGYG +WG I +YL+ R LR LLID G+K D Sbjct: 135 PPQYRLIMVDMPGYGLGSEA-----AWGREIEKYLARRKMLRGAVLLIDAVAGIKDADLM 189 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 V L V +VLTK+DKL E + + + + +V Sbjct: 190 VLETLRDAEVRTAVVLTKVDKLLREDQPEQRSRVEEVCLSVWEELRKV 237 >gi|190349143|gb|EDK41739.2| hypothetical protein PGUG_05837 [Meyerozyma guilliermondii ATCC 6260] Length = 354 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 78/161 (48%), Gaps = 16/161 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKN--LARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 PEI F G +NVGKSSL+N L + LA S PG TQ +N + N Sbjct: 143 LPEILFLGHTNVGKSSLVNNLFGEGSGTLAYVSRQPGYTQTMNCY---------NVGKKF 193 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D PGYG + G +++ YL R LR VY+LID G+ D+++ L Sbjct: 194 RLIDSPGYGMRGE-----EKQGQMVLEYLERRKVLRQVYVLIDAAQGMLPEDEEMLEHLI 248 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 +S+ IVLTK+D++ + K K ++ T P+ Sbjct: 249 DSGISFDIVLTKVDQVIDRYVAQLPSKVKEAMKKEKTLAPK 289 >gi|226327660|ref|ZP_03803178.1| hypothetical protein PROPEN_01533 [Proteus penneri ATCC 35198] gi|225204186|gb|EEG86540.1| hypothetical protein PROPEN_01533 [Proteus penneri ATCC 35198] Length = 124 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 9/113 (7%) Query: 5 TIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR 64 T F F+ P+I LP EIAF+GRSN GKSS +N L + LARTS PGR Sbjct: 18 TQFNYQKAHFIISAPDIRHLPPDSGIEIAFAGRSNAGKSSALNALTQQNGLARTSKTPGR 77 Query: 65 TQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSE 117 TQ +N F ++ + LVD+PGYGYA+ P++ W + YL + Sbjct: 78 TQLINLFQIEE---------GLRLVDLPGYGYAQVPEEMKRKWQRSLGEYLQK 121 >gi|313114942|ref|ZP_07800438.1| ribosome-associated GTPase EngA [Faecalibacterium cf. prausnitzii KLE1255] gi|310622735|gb|EFQ06194.1| ribosome-associated GTPase EngA [Faecalibacterium cf. prausnitzii KLE1255] Length = 447 Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 19/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ LA + PG T+ F +N + N LV Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQR-LAIVEDTPGITRDRIF------ANCEWNGHDFLLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G PK + + T C+ +++D R G+ D+DV L + Sbjct: 57 DTGGI----EPKATEGILAHMREQAQIAIDTADCIIMVVDVRDGLTAADEDVAHMLRRSH 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K DK+ + Y EV+P SSV G L A+ Sbjct: 113 KPIILAVNKCDKVGDAPM--------EMYEFYNLGFDEVMPISSVHGHGTGDLLDAVCAH 164 Query: 210 INY 212 +++ Sbjct: 165 LDF 167 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 16/194 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V E +P +A GR NVGKSSL N ++ + +N G T+ Sbjct: 167 FSETVVEEDRIP------VAIIGRPNVGKSSLTNRILGENRM-IVANEAGTTRDAI---- 215 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + N D G ++ + ++VR L+ R +L+D G Sbjct: 216 --DTPVDNAYGKFIFTDTAGLRKRSNITDGLERY--MVVRALAAVERSRVALILVDATVG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTS 192 + D V + + + IV+ K D + + + + + +I S Sbjct: 272 FTEQDSKVAGYAHDQGKACIIVVNKWDAVEGKETNTMELQRRDYAECFSFMGYAPIIFIS 331 Query: 193 SVKRKGIEVLRKAI 206 + + L + I Sbjct: 332 AQTGYNVNKLMQLI 345 >gi|257439162|ref|ZP_05614917.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii A2-165] gi|257198413|gb|EEU96697.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii A2-165] Length = 447 Score = 134 bits (339), Expect = 5e-30, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 19/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ LA + PG T+ F +N + + LV Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQR-LAIVEDTPGITRDRIF------ANCEWSGHEFMLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G PK + + T C+ +++D R G+ D++V L + Sbjct: 57 DTGGI----EPKATEGILAHMREQAEIAIDTADCIIMVVDVRDGLTAADEEVAHMLRRSH 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K DK T E L Y EV+P SSV G L A+ Sbjct: 113 KPIILAVNKCDK--------TGEAPMELYEFYNLGFDEVLPISSVHGHGTGDLLDAVCAH 164 Query: 210 INY 212 +++ Sbjct: 165 LDF 167 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 70/194 (36%), Gaps = 16/194 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V E +P +A GR NVGKSSL N ++ + +N G T+ Sbjct: 167 FSETVVEEDRIP------VAIIGRPNVGKSSLTNRILGENRM-IVANEAGTTRDAI---- 215 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + N D G ++ + ++VR L+ R +L+D G Sbjct: 216 --DTPVDNAYGKFIFTDTAGLRKRSNISDGLERY--MVVRALAAVERSRVALILVDATVG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTS 192 + D V + ++ + IV+ K D + + + + + +I S Sbjct: 272 FTEQDSKVAGYAHEQGKACIIVVNKWDAVEGKETNTMEHQRRDYADCFSFMGYAPIIFIS 331 Query: 193 SVKRKGIEVLRKAI 206 + + L + I Sbjct: 332 AQTGYNVNKLMQLI 345 >gi|260940250|ref|XP_002614425.1| hypothetical protein CLUG_05911 [Clavispora lusitaniae ATCC 42720] gi|238852319|gb|EEQ41783.1| hypothetical protein CLUG_05911 [Clavispora lusitaniae ATCC 42720] Length = 367 Score = 134 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 53/233 (22%), Positives = 92/233 (39%), Gaps = 47/233 (20%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAG-------------PPEIAFSGRSNVGKSSLINIL 49 + F ++++ LP G PEI G +N GKS+L+N L Sbjct: 79 ADAFFFRASFRHEWTCAHYNDLPGVGTESDKKQTKGHLPLPEILLLGHTNAGKSTLVNNL 138 Query: 50 V----------NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA 99 +LA S G T+ LN + D + +VD PGYG Sbjct: 139 FMNKEQAKNTNGAPSLAYVSRRAGFTKCLNCYNVSD---------TIRIVDSPGYG---- 185 Query: 100 PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKI 159 + + G +++ Y+ R LR +L++D G++ D + FL + V ++IV TK+ Sbjct: 186 -EFGEEQQGEIVLEYIRRRKELRRTFLVVDSTAGIRDEDAALIDFLVEHGVPFEIVFTKV 244 Query: 160 D--------KLSPTTAQETLEKTKYLIRNYPTAHPEVIPT--SSVKRKGIEVL 202 D K+ +++ +E + V+ S ++R G+ L Sbjct: 245 DAVVSRKFPKIKMKSSKNNVEARLAAFEAVKDGNSNVVAHFDSIIQRSGVAEL 297 >gi|6320543|ref|NP_010623.1| hypothetical protein YDR336W [Saccharomyces cerevisiae S288c] gi|74627209|sp|Q05473|YD336_YEAST RecName: Full=Uncharacterized GTP-binding protein YDR336W gi|1230663|gb|AAB64772.1| Ydr336wp [Saccharomyces cerevisiae] gi|190404723|gb|EDV07990.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi|207346439|gb|EDZ72932.1| YDR336Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256269518|gb|EEU04805.1| YDR336W-like protein [Saccharomyces cerevisiae JAY291] gi|259145573|emb|CAY78837.1| EC1118_1D0_6260p [Saccharomyces cerevisiae EC1118] gi|285811354|tpg|DAA12178.1| TPA: hypothetical protein YDR336W [Saccharomyces cerevisiae S288c] gi|323334166|gb|EGA75550.1| YDR336W-like protein [Saccharomyces cerevisiae AWRI796] gi|323349206|gb|EGA83436.1| YDR336W-like protein [Saccharomyces cerevisiae Lalvin QA23] Length = 314 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 52/242 (21%) Query: 6 IFTKSAWIFLRGVPEIGLLPK------------------------AGPPEIAFSGRSNVG 41 F K+ F +P+ PE+ F G +NVG Sbjct: 86 FFNKAKVEFEWCAASFDDIPENPFLNKKSHKDILKDHGECGTTLIDTLPEVIFLGGTNVG 145 Query: 42 KSSLINILVNRK------NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 KSS++N + +LAR S G T+ LN + N + ++D PGYG Sbjct: 146 KSSILNNITTSHVSRDLGSLARVSKTTGFTKTLNCY---------NVGNRLRMIDSPGYG 196 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 + + G + ++YL ER L +LL+ + D + ++ + V +++V Sbjct: 197 FNSS-----KEQGKVTLQYLLERKQLVRCFLLLAGDKEINNTDNMIIQYIHEHGVPFEVV 251 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------KRKGIEVLRKAILET 209 TK+DK+ + +K P ++ T+S+ KR GI++LR I ++ Sbjct: 252 FTKMDKVK--DLNKFKKKVMSSGLMDLPTLPRLVLTNSLTSSTSPKRFGIDLLRYVIFQS 309 Query: 210 IN 211 Sbjct: 310 CG 311 >gi|151942312|gb|EDN60668.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 314 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 52/242 (21%) Query: 6 IFTKSAWIFLRGVPEIGLLPK------------------------AGPPEIAFSGRSNVG 41 F K+ F +P+ PE+ F G +NVG Sbjct: 86 FFNKAKVEFEWCAASFDDIPENPFLNKKSHKDILKDHGECGTTLIDTLPEVIFLGGTNVG 145 Query: 42 KSSLINILVNRK------NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 KSS++N + +LAR S G T+ LN + N + ++D PGYG Sbjct: 146 KSSILNNITTSHVSRDLGSLARVSKTTGFTKTLNCY---------NVGNRLRMIDSPGYG 196 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 + + G + ++YL ER L +LL+ + D + ++ + V +++V Sbjct: 197 FNSS-----KEQGKVTLQYLLERKQLVRCFLLLAGDKEINNTDNMIIQYIHEHGVPFEVV 251 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV------KRKGIEVLRKAILET 209 TK+DK+ + +K P ++ T+S+ KR GI++LR I ++ Sbjct: 252 FTKMDKVK--DLNKFKKKVMSSGLMDLPTLPRLVLTNSLTSSTSPKRFGIDLLRYVIFQS 309 Query: 210 IN 211 Sbjct: 310 CG 311 >gi|146412205|ref|XP_001482074.1| hypothetical protein PGUG_05837 [Meyerozyma guilliermondii ATCC 6260] Length = 354 Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats. Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 16/161 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKN--LARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 PEI F G +NVGKSSL+N L + LA S PG TQ +N + N Sbjct: 143 LPEILFLGHTNVGKSSLVNNLFGEGSGTLAYVSRQPGYTQTMNCY---------NVGKKF 193 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D PGYG + G +++ YL R LR VY+LID G+ D+++ L Sbjct: 194 RLIDSPGYGMRGE-----EKQGQMVLEYLERRKVLRQVYVLIDAAQGMLPEDEEMLEHLI 248 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 + + IVLTK+D++ + K K ++ T P+ Sbjct: 249 DSGILFDIVLTKVDQVIDRYVAQLPSKVKEAMKKEKTLAPK 289 >gi|161502327|ref|YP_001569439.1| GTP-binding protein EngA [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863674|gb|ABX20297.1| hypothetical protein SARI_00360 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 504 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P+ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 205 APEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 257 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 258 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 315 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 316 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 373 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 374 GVGNLFESVREAYD 387 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 16 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 68 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 69 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 123 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y ++ P ++ +G+ L + +L Sbjct: 124 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGDIYPIAASHGRGVLSLLEHVL 173 >gi|224011962|ref|XP_002294634.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220969654|gb|EED87994.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 160 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 29/162 (17%) Query: 31 EIAFSGRSNVGKSSLINILVN---------RKNL---------------ARTSNAPGRTQ 66 EIA +GRSNVGKS+L+N L+ RK + A TS+ PG T+ Sbjct: 3 EIALAGRSNVGKSTLLNALLYGNIDEALSPRKYVRGKTPDGAKLPRGVKAVTSDKPGETK 62 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 F D ++ + ++ LVD+PGYG+A A ++ W L+ YL ER L+ + + Sbjct: 63 E---FTVND-NSKEVAKMSLLLVDLPGYGFAFAKEERTKEWKELMHHYLLERRCLKRILM 118 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAV-SYQIVLTKIDKLSPTTA 167 L+D RHG K+ID D + L + + Q+VLTK D + Sbjct: 119 LLDARHGFKKIDYDFLADLQEGELPPIQLVLTKCDLVKQADL 160 >gi|32455227|gb|AAP83329.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis] Length = 490 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 191 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 243 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 244 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 359 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 360 GVGNLFESVREAYD 373 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|16765839|ref|NP_461454.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56412602|ref|YP_149677.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|167549461|ref|ZP_02343220.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991827|ref|ZP_02572926.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168261443|ref|ZP_02683416.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466731|ref|ZP_02700585.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194446079|ref|YP_002041777.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|197264629|ref|ZP_03164703.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197361537|ref|YP_002141173.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|238912639|ref|ZP_04656476.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|17865704|sp|Q9XCI8|DER_SALTY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|81821610|sp|Q5PNI6|DER_SALPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238689919|sp|B5BAY9|DER_SALPK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238693574|sp|B4T0P5|DER_SALNS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|16421063|gb|AAL21413.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56126859|gb|AAV76365.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|194404742|gb|ACF64964.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|195630729|gb|EDX49321.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093013|emb|CAR58446.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197242884|gb|EDY25504.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205325405|gb|EDZ13244.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329876|gb|EDZ16640.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205349650|gb|EDZ36281.1| ribosome-associated GTPase EngA [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261247715|emb|CBG25543.1| GTP-binding protein engA [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994635|gb|ACY89520.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159068|emb|CBW18582.1| GTP-binding protein engA [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913506|dbj|BAJ37480.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087014|emb|CBY96783.1| GTP-binding protein engA [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222780|gb|EFX47851.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613736|gb|EFY10675.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619521|gb|EFY16397.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625026|gb|EFY21855.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629531|gb|EFY26307.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634038|gb|EFY30775.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635524|gb|EFY32235.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639800|gb|EFY36479.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644422|gb|EFY40963.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648567|gb|EFY45016.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655213|gb|EFY51522.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658260|gb|EFY54526.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664261|gb|EFY60458.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669428|gb|EFY65577.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673155|gb|EFY69261.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676547|gb|EFY72615.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683297|gb|EFY79311.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685817|gb|EFY81810.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323130847|gb|ADX18277.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194760|gb|EFZ79948.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199552|gb|EFZ84643.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204673|gb|EFZ89671.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208121|gb|EFZ93066.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210155|gb|EFZ95056.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217023|gb|EGA01745.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221821|gb|EGA06225.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225000|gb|EGA09255.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229289|gb|EGA13413.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235396|gb|EGA19480.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237418|gb|EGA21481.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245172|gb|EGA29173.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248875|gb|EGA32801.1| GTP-binding protein Der [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253162|gb|EGA36994.1| GTP-binding protein Der [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255396|gb|EGA39164.1| GTP-binding protein Der [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263529|gb|EGA47056.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266356|gb|EGA49844.1| GTP-binding protein Der [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269813|gb|EGA53263.1| GTP-binding protein Der [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|332989446|gb|AEF08429.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 490 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 191 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 243 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 244 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 359 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 360 GVGNLFESVREAYD 373 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|326624338|gb|EGE30683.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 504 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 205 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 257 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 258 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 315 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 316 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 373 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 374 GVGNLFESVREAYD 387 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 16 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 68 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 69 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 123 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 124 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 173 >gi|16761434|ref|NP_457051.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140869|ref|NP_804211.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213161952|ref|ZP_03347662.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425335|ref|ZP_03358085.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213609480|ref|ZP_03369306.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213861384|ref|ZP_03385854.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825430|ref|ZP_06544667.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|26006725|sp|Q8Z4P6|DER_SALTI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|25328266|pir||AF0821 probable GTP-binding protein STY2764 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503734|emb|CAD02722.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29136494|gb|AAO68060.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 490 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 191 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 243 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 244 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 359 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 360 GVGNLFESVREAYD 373 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|161612723|ref|YP_001586688.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189037158|sp|A9N205|DER_SALPB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|161362087|gb|ABX65855.1| hypothetical protein SPAB_00422 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 490 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 191 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 243 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 244 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 359 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 360 GVGNLFESVREAYD 373 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|237832111|ref|XP_002365353.1| GTP-binding conserved hypothetical domain-containing protein [Toxoplasma gondii ME49] gi|211963017|gb|EEA98212.1| GTP-binding conserved hypothetical domain-containing protein [Toxoplasma gondii ME49] Length = 712 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 55/219 (25%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILV--------NRKNL--ARTSNAPGRTQHLNFFVP 73 LP G PE+AF GRSNVGKSSL+N L R L AR S PG T+ +N + Sbjct: 257 LPSLGLPEVAFLGRSNVGKSSLLNALCLYTQKKHRGRTRLEMARVSRRPGSTRSINLYEA 316 Query: 74 ----------------------------------KDFSNLKNNLPAMA--------LVDM 91 K + +P A D+ Sbjct: 317 FGGCASEGSLERKGKRSRTRKSTGHTTRDRQLPRKQQGKHPSGVPLTATGNRGLLLFADL 376 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PGYG+ + + + Y+ +R+ LR +L+D R G++ D ++ +L ++V Sbjct: 377 PGYGFTQGLSGEESQQLSKNVRLYVEKRNELRLFMILVDGRLGLQDHDAEMLRWLATQSV 436 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 +V+TK D L + L + + + + + P ++ Sbjct: 437 PTLLVVTKADCLGAKDLENLLNQLSFYPKLF--SLPPIL 473 >gi|50312027|ref|XP_456045.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49645181|emb|CAG98753.1| KLLA0F21626p [Kluyveromyces lactis] Length = 359 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 26/196 (13%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNR------KNLARTSNAPGRTQHLNFFVPKDFSNLK 80 PEIAF GR N GKS+L+N + A S G T+ +N F Sbjct: 167 NQLPEIAFLGRCNSGKSTLLNSVTTEVTRNSLNEYANASKKAGFTKTINCF--------- 217 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 N ++D PGYG K V+ G + + YL +R LR +LLI +G + D Sbjct: 218 NVGGKFRIIDTPGYG----TKGTVEQ-GKVTMDYLHKRRELRRSFLLISANNGFSEYDAQ 272 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS-----SVK 195 + L + ++IV TK+D + E++ + ++R PT+ + S K Sbjct: 273 MIDLLVNDGIPFEIVFTKMDTIKDMAQVESIIEESNVLR-LPTSPRFIFLNSMTNKRCQK 331 Query: 196 RKGIEVLRKAILETIN 211 R G++VLR +LE Sbjct: 332 RFGLDVLRYVVLEACG 347 >gi|207857927|ref|YP_002244578.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690463|sp|B5R578|DER_SALEP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|206709730|emb|CAR34082.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 490 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 191 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 243 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 244 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 359 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 360 GVGNLFESVREAYD 373 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|62181086|ref|YP_217503.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224582944|ref|YP_002636742.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|81309623|sp|Q57LJ0|DER_SALCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783165|sp|C0PYN4|DER_SALPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|62128719|gb|AAX66422.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224467471|gb|ACN45301.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322715573|gb|EFZ07144.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 490 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 191 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 243 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 244 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 359 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 360 GVGNLFESVREAYD 373 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|325117193|emb|CBZ52745.1| GTP-binding conserved hypothetical domain-containing protein [Neospora caninum Liverpool] Length = 630 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 52/203 (25%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILV-------NRK-----------NLARTSNAPGRT 65 LP+ G PE+AF GRSNVGKSSL+N L +R+ + AR S PG T Sbjct: 161 LPRLGLPEVAFLGRSNVGKSSLLNALCRYTQAQRHRRASKAVRGASAMDFARVSRRPGST 220 Query: 66 QHLNFFVPKDFSNLK---------------------------------NNLPAMALVDMP 92 + +N + + + + D+P Sbjct: 221 RSINLYEVFGGAKNPASCAGVQKKGGKSRGGARVAGQAPRAKAPLTSSGDRGLLVFADLP 280 Query: 93 GYGYARA-PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 GYG+ R + + Y+ +R+ LR +L+D R G++ D D+ +L ++V Sbjct: 281 GYGFTRGLSAQESQRLSKNVRLYVEKRNELRLFLILVDGRAGIQDHDADLLRWLVAQSVP 340 Query: 152 YQIVLTKIDKLSPTTAQETLEKT 174 +V+TK D L+P L + Sbjct: 341 TLLVVTKADCLAPKHLDNLLNQL 363 >gi|213028788|ref|ZP_03343235.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 365 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 66 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 118 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 119 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 176 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 177 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 234 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 235 GVGNLFESVREAYD 248 >gi|289811789|ref|ZP_06542418.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 377 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 78 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 130 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 131 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 188 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 189 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 246 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 247 GVGNLFESVREAYD 260 >gi|253689379|ref|YP_003018569.1| small GTP-binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259645883|sp|C6DBH0|DER_PECCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|251755957|gb|ACT14033.1| small GTP-binding protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 495 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 11/191 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 E P+ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 197 AEDDFNPEDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRDSIYI------P 249 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 250 MVRDEREYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 307 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D LS ++ E +R + S++ G Sbjct: 308 LSLLGFILNSGRSLVIVVNKWDGLSQEVREQVKETLD--LRLGFIDFARIHFISALHGSG 365 Query: 199 IEVLRKAILET 209 + L +++ E Sbjct: 366 VGNLFESVTEA 376 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 VDTGGI---DGTEDGVET--RMAGQSLVAIEEADIVLFMVDARAGLMPADEGIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D L P Y EV P ++ +G+ L + +L Sbjct: 110 EKTTVLVANKTDGLDPDMVTA---------DFYSLGMGEVYPIAASHGRGVTSLLETVL 159 >gi|261820577|ref|YP_003258683.1| GTP-binding protein EngA [Pectobacterium wasabiae WPP163] gi|261604590|gb|ACX87076.1| ribosome-associated GTPase EngA [Pectobacterium wasabiae WPP163] Length = 495 Score = 132 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 11/191 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 E P+ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 197 AEDDFNPEDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------P 249 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 250 MVRDEREYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 307 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D LS + + +R + S++ G Sbjct: 308 LSLLGFILNSGRSLVIVVNKWDGLSQEVRDQVKDMLD--LRLGFIDFARIHFISALHGSG 365 Query: 199 IEVLRKAILET 209 + L ++++E Sbjct: 366 VGNLFESVMEA 376 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 66/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 VDTGGI---DGTEDGVET--RMAGQSLVAIEEADIVLFMVDARAGLMPADEGIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P Y EV ++ +G+ L + +L Sbjct: 110 EKMTVLVANKTDGLDPDMVTA---------DFYSLGMGEVYAIAASHGRGVTSLLETVL 159 >gi|160942963|ref|ZP_02090201.1| hypothetical protein FAEPRAM212_00440 [Faecalibacterium prausnitzii M21/2] gi|158445657|gb|EDP22660.1| hypothetical protein FAEPRAM212_00440 [Faecalibacterium prausnitzii M21/2] gi|295103496|emb|CBL01040.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii SL3/3] Length = 447 Score = 132 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 19/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ LA + PG T+ F +N + N LV Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQR-LAIVEDTPGITRDRIF------ANCEWNGHEFLLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G PK + + T C+ ++ D R+G+ D+DV L + Sbjct: 57 DTGGI----EPKATEGILAHMREQAQIAIDTADCIIMVTDVRNGLTAADEDVAHMLRRSH 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K DK+ E L Y EV+P SSV G L A+ Sbjct: 113 KPIILAVNKCDKVG--------EAPMELYEFYNLGFDEVMPISSVHGHGTGDLLDAVCAH 164 Query: 210 INY 212 +++ Sbjct: 165 LDF 167 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 70/194 (36%), Gaps = 16/194 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V E +P +A GR NVGKSSL N ++ + +N G T+ Sbjct: 167 FSETVVEEDRIP------VAIIGRPNVGKSSLTNRILGENRM-IVANEAGTTRDAI---- 215 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + N D G ++ + ++VR L+ R +L+D G Sbjct: 216 --DTPVDNAYGKFIFTDTAGLRKRSNISDGLERY--MVVRALAAVERSRVALILVDATVG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTS 192 + D V + ++ + IV+ K D + + + + + +I S Sbjct: 272 FTEQDSKVAGYAHEQGKACIIVVNKWDAVEGKETNTMELQRRGYAECFSFMGYAPIIFIS 331 Query: 193 SVKRKGIEVLRKAI 206 + + L + I Sbjct: 332 AQTGYNVNKLMQLI 345 >gi|213585218|ref|ZP_03367044.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 330 Score = 132 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 31 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 83 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 84 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 141 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 142 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 199 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 200 GVGNLFESVREAYD 213 >gi|213649668|ref|ZP_03379721.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 339 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 40 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 92 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 93 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 150 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 151 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 208 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 209 GVGNLFESVREAYD 222 >gi|283786127|ref|YP_003365992.1| GTP-binding protein [Citrobacter rodentium ICC168] gi|282949581|emb|CBG89199.1| GTP-binding protein [Citrobacter rodentium ICC168] Length = 490 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 192 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------P 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 245 MERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 302 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D LS ++ E + + V S++ G Sbjct: 303 LSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSG 360 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 361 VGNLFESVREAYD 373 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIARHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIHPIAASHGRGVLSLLEHVL 159 >gi|224010369|ref|XP_002294142.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970159|gb|EED88497.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 536 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 76/289 (26%), Positives = 104/289 (35%), Gaps = 110/289 (38%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINIL----------------VNRKNLARTSNAPGRTQHL 68 P G PE+AF GRSN GKSSLIN L LARTS PGRTQ + Sbjct: 199 PTNGTPEVAFLGRSNTGKSSLINALSSLILRGGGGASKHIGSGGGELARTSKRPGRTQTI 258 Query: 69 NFFVP------------------------KDFSNLKN--NLPAMALVDMPGYGYARAPKK 102 N+F D +N N + LVD+PG+GYA AP + Sbjct: 259 NYFGLIPNNAVDSSNSSSSLPFTSTSAKAGDKANKHPSINQSKLFLVDLPGFGYASAPDE 318 Query: 103 NVDSWGGLIVRYLSERST------------------------------------------ 120 +VD+W ++L R++ Sbjct: 319 SVDAWQQRTQQFLVSRASTPEEVGKGGGIQPWPNANKSEGKRGTASNNNNNNNSRRIVSR 378 Query: 121 ------LRCVYLLIDCRHG-VKQIDQDVFSFLDKKAVSYQIVLTKID--------KLSPT 165 L+ +YLL+D R ID V + D ++ Y IVLTK+D KL+ Sbjct: 379 DTSSPPLKRLYLLVDSRLPEPTLIDLSVMGWCDDYSIPYTIVLTKVDGSNRAHCVKLTNQ 438 Query: 166 -----------TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + L+ + P V TSS G+E L Sbjct: 439 LCMRYHSLLMDNGSHDEDEEEGLMDDTVYMDPVVYWTSSKDGLGMEELL 487 >gi|206579507|ref|YP_002237139.1| GTP-binding protein EngA [Klebsiella pneumoniae 342] gi|206568565|gb|ACI10341.1| GTP-binding protein EngA [Klebsiella pneumoniae 342] Length = 498 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 78/193 (40%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 200 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------P 252 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 253 MQRDEREYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 310 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D LS ++ E Y + V S++ G Sbjct: 311 LSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDYRLG--FIDFARVHFISALHGSG 368 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 369 VGNLFESVREAYD 381 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 22/184 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 8 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 60 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D + L + Sbjct: 61 IDTGGI---DGTEEGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADIAIAKHLRSR 115 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLRKAIL 207 +V K D + A + + ++ P ++ +G+ +L +A+L Sbjct: 116 EKPTFLVANKTDGIDVDQA---------MADFWSLGLGDIYPIAASHGRGVTSLLEQALL 166 Query: 208 ETIN 211 ++ Sbjct: 167 PWVD 170 >gi|227112682|ref|ZP_03826338.1| GTP-binding protein EngA [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 495 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + + + Sbjct: 203 PEDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRDSIYI------PMVRDER 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 256 EYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D LS ++ E +R + S++ G+ L + Sbjct: 314 ILNSGRSLVIVVNKWDGLSQEVREQVKETLD--LRLGFIDFARIHFISALHGSGVGNLFE 371 Query: 205 AILET 209 ++ E Sbjct: 372 SVTEA 376 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 VDTGGI---DGTEDGVET--RMAGQSLVAIEEADIVLFMVDARAGLMPADEGIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D L P Y EV ++ +G+ L + +L Sbjct: 110 EKTTVLVANKTDGLDPDMVTA---------DFYSLGMGEVYAIAASHGRGVTSLLETVL 159 >gi|152971372|ref|YP_001336481.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895966|ref|YP_002920702.1| GTP-binding protein EngA [Klebsiella pneumoniae NTUH-K2044] gi|262040248|ref|ZP_06013499.1| ribosome-associated GTPase EngA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330007822|ref|ZP_08306080.1| ribosome biogenesis GTPase Der [Klebsiella sp. MS 92-3] gi|166198723|sp|A6TCD0|DER_KLEP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|150956221|gb|ABR78251.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548284|dbj|BAH64635.1| GTP-binding protein EngA [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259042357|gb|EEW43377.1| ribosome-associated GTPase EngA [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535310|gb|EGF61796.1| ribosome biogenesis GTPase Der [Klebsiella sp. MS 92-3] Length = 492 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 78/193 (40%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 194 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------P 246 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 247 MQRDEREYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 304 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D LS ++ E Y + V S++ G Sbjct: 305 LSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDYRLG--FIDFARVHFISALHGSG 362 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 363 VGNLFESVREAYD 375 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 22/184 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEEGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADIAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLRKAIL 207 +V K D + A + + ++ P ++ +G+ +L +A+L Sbjct: 110 EKPTFLVANKTDGIDVDQA---------MADFWSLGLGDIYPIAASHGRGVTSLLEQALL 160 Query: 208 ETIN 211 ++ Sbjct: 161 PWVD 164 >gi|288934098|ref|YP_003438157.1| ribosome-associated GTPase EngA [Klebsiella variicola At-22] gi|290508296|ref|ZP_06547667.1| ribosome-associated GTPase EngA [Klebsiella sp. 1_1_55] gi|288888827|gb|ADC57145.1| ribosome-associated GTPase EngA [Klebsiella variicola At-22] gi|289777690|gb|EFD85687.1| ribosome-associated GTPase EngA [Klebsiella sp. 1_1_55] Length = 492 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 78/193 (40%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 194 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------P 246 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 247 MQRDEREYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 304 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D LS ++ E Y + V S++ G Sbjct: 305 LSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDYRLG--FIDFARVHFISALHGSG 362 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 363 VGNLFESVREAYD 375 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 22/184 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEEGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADIAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLRKAIL 207 +V K D + A + + ++ P ++ +G+ +L +A+L Sbjct: 110 EKPTFLVANKTDGIDVDQA---------MADFWSLGLGDIYPIAASHGRGVTSLLEQALL 160 Query: 208 ETIN 211 ++ Sbjct: 161 PWVD 164 >gi|242240151|ref|YP_002988332.1| GTP-binding protein EngA [Dickeya dadantii Ech703] gi|242132208|gb|ACS86510.1| small GTP-binding protein [Dickeya dadantii Ech703] Length = 494 Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 11/186 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P P ++A GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 201 VPADQPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDE 253 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 254 REYILIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLG 311 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 F+ S IV+ K D LS +E +++T +R + S++ G+ L Sbjct: 312 FILNSGRSLVIVVNKWDGLSQ-EIKEQVKETLD-LRLGFIDFARIHFISALHGSGVGNLF 369 Query: 204 KAILET 209 +++ E Sbjct: 370 ESVDEA 375 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 67/176 (38%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V L+D R G+ D + L + Sbjct: 55 IDTGGI---DGSEDGVET--RMAEQSLQAIEEADIVLFLVDARDGLMPADHAIAQHLRTR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + +V K+D + T + Y +V P ++ +G+ L + Sbjct: 110 EKATFLVANKVDGIDIDT---------GIADFYSLGFGDVYPIAASHGRGVTSLLE 156 >gi|254673589|emb|CBA09094.1| GTP-binding protein [Neisseria meningitidis alpha275] Length = 164 Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 1/116 (0%) Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGYGYA+ P+ W L+ YL +R L + L++D RH +K++D + F Sbjct: 32 PGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRP 91 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTSSVKRKGIEVLRKAI 206 I+L+K DKLS +TL + K L++ Y + V SS+K++GI+ + + Sbjct: 92 VHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFSSLKKQGIDEANRTV 147 >gi|269140141|ref|YP_003296842.1| GTP-binding protein [Edwardsiella tarda EIB202] gi|267985802|gb|ACY85631.1| GTP-binding protein [Edwardsiella tarda EIB202] gi|304559975|gb|ADM42639.1| GTP-binding protein EngA [Edwardsiella tarda FL6-60] Length = 494 Score = 131 bits (331), Expect = 5e-29, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 202 PINQPIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDER 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYVLIDTAGVRKRGKVTDTVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S +V+ K D LS ++ + +R + S++ G+ L + Sbjct: 313 ILNSGRSLVVVVNKWDGLSLEVKEQVKDMLD--LRLGFVDFARIHFISALHGSGVGNLFE 370 Query: 205 AILET 209 +I E Sbjct: 371 SIQEA 375 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 24/182 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + N + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVNGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V L+D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTENGVETH--MAEQSLMAIEEADIVLFLVDARDGLLPADEAIARHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V K D + A + Y EV P ++ +G+ L I + Sbjct: 110 DKATFLVANKTDGIDAEVA---------IGDFYALGMGEVHPIAASHGRGVTQL---IED 157 Query: 209 TI 210 + Sbjct: 158 AL 159 >gi|320583814|gb|EFW98027.1| GTPBP8, GTP-binding protein 8 (putative) [Pichia angusta DL-1] Length = 278 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 25/195 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKN-----LARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 PE+ GR NVGKSSL+N L++ A+ + G T LNF+ N Sbjct: 54 LPEVILLGRCNVGKSSLVNALMSNNRQSATPYAKVKQSAGYTPCLNFY---------NVG 104 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD PGYG P G L ++YL+ER LR +L+++ G+ + D+ + Sbjct: 105 GLFRLVDSPGYGVKGKP-----WQGELTMQYLAERRELRNCFLILNGDIGLNKYDELILE 159 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEK-TKYLIRNYPTAHPEVIPTSS-----VKRK 197 L + V + I+ KIDK+ + + E+ I N P + +S +R Sbjct: 160 ALVEMGVQFDIIFNKIDKIKNNSRIQHYEELISTSILNDLKIKPRIYFANSIESDLKQRT 219 Query: 198 GIEVLRKAILETINY 212 GI +R IL++ Y Sbjct: 220 GINEIRYGILQSCGY 234 >gi|218294927|ref|ZP_03495781.1| small GTP-binding protein [Thermus aquaticus Y51MC23] gi|218244835|gb|EED11359.1| small GTP-binding protein [Thermus aquaticus Y51MC23] Length = 432 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 22/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL N L+ +++ A ++ PG T+ L V + LVD Sbjct: 3 KVVIVGRPNVGKSSLFNRLLGKRS-AVVADEPGVTRDLKEGVV------ETEQGRFLLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +K + + R L E V +D R + D +V +L KK Sbjct: 56 TGGLWSGDRWEKKI---QEKVDRALEEAE---LVLFAVDGRSDLTPADYEVAEYLRKKGK 109 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V TK+D SP+ YL Y + IPTSS ++G+E L +AI + + Sbjct: 110 PVILVATKVD--SPS-------HEAYLGPLYALGFGDPIPTSSEHKRGLEELLRAIWQRL 160 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 75/187 (40%), Gaps = 18/187 (9%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 V ++ P+ +A GR N GKSSL+N ++ + + S PG T+ Sbjct: 162 VKQMDAEPEVAGIRLAIVGRPNAGKSSLLNAILGEERV-IVSEEPGTTRDTI------DV 214 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + N L+D G + P+ V+ I R L V L++D + Sbjct: 215 EVYRNGNRFVLLDTAGIR--KRPESIVEELA--IRRSLRAIEEADVVLLVVD---PFQVG 267 Query: 138 DQD--VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D++ + + +K +V+TK D + A + + + + H + TS+ Sbjct: 268 DRELKLANHAMEKGKPVLLVITKWDLVKKEEAPRVRRELREKLAHL--EHLPRVYTSAFT 325 Query: 196 RKGIEVL 202 ++ ++ + Sbjct: 326 KQNLDRI 332 >gi|238921035|ref|YP_002934550.1| GTP-binding protein EngA [Edwardsiella ictaluri 93-146] gi|259645874|sp|C5BES7|DER_EDWI9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238870604|gb|ACR70315.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 494 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 202 PINQPIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDER 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYVLIDTAGVRKRGKVTDTVEKFS--VIKTLQAIEDANVVLLVIDARQGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S +V+ K D LS ++ + +R + S++ G+ L + Sbjct: 313 ILNSGRSLVVVVNKWDGLSLEVKEQVKDMLD--LRLGFVDFARIHFISALHGSGVGNLFE 370 Query: 205 AILET 209 +I E Sbjct: 371 SIQEA 375 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 24/182 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + N + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVNGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V L+D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTENGVETH--MAEQSLMAIEEADIVLFLVDARDGLLPADEAIARHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V K D + A + Y EV P ++ +G+ L I + Sbjct: 110 DKATFLVANKTDGIDAEVA---------VGDFYSLGMGEVHPIAASHGRGVTQL---IED 157 Query: 209 TI 210 + Sbjct: 158 AL 159 >gi|225848630|ref|YP_002728793.1| GTP-binding protein EngA [Sulfurihydrogenibium azorense Az-Fu1] gi|225644538|gb|ACN99588.1| ribosome-associated GTPase EngA [Sulfurihydrogenibium azorense Az-Fu1] Length = 443 Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 11/184 (5%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 ++A G+ N GKSSL+N ++N + + S+ PG T+ + + + Sbjct: 179 DYIKVAIVGKPNAGKSSLLNAILNEERV-LVSDIPGTTRDTV------DTLFEKDSQRFL 231 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G + V+ + + R + V L+ID G + DQ + + + Sbjct: 232 FLDTAGIRKRSKVEYGVEFFS--VGRSIEAIEKADVVVLVIDAIIGATEQDQKIAGLIQR 289 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + IV+ KID L ++ + + K + Y + ++ TS+ K+ GIE L I+ Sbjct: 290 RYKPAVIVINKIDMLKEKDIEKVIRQVKEKL--YFLDYAPIVLTSAYKKIGIEELLNQIV 347 Query: 208 ETIN 211 + N Sbjct: 348 KVYN 351 Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N L+ ++ A + PG T+ S + +VD Sbjct: 4 VAIVGRPNVGKSSLFNRLIGKRK-AIVEDIPGVTRDRII------SQTEWRGVKFEVVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 GY + D + I + + E + ++D + G+ +D+++ + L + Sbjct: 57 GGYI-----TSDEDKFAPYIRKQVEKELQEADLLVFVVDGKQGLTPLDKEIATLLHRTEK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KID EK K Y +VIP S++++ GI L I E I Sbjct: 112 PVIVAVNKID---------DPEKEKLAYEFYELGFQDVIPISTIQKLGIADLLDKIYEYI 162 >gi|295100402|emb|CBK97947.1| ribosome-associated GTPase EngA [Faecalibacterium prausnitzii L2-6] Length = 447 Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 19/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ LA + PG T+ F +N + + LV Sbjct: 4 PIVAVVGRPNVGKSTLFNKLCGQR-LAIVEDTPGITRDRIF------ANCEWSGHEFLLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G PK + + T C+ +++D R+G+ D+DV L + Sbjct: 57 DTGGI----EPKATEGILAHMREQAQIAIDTADCIIMVVDVRNGLTAADEDVAHMLRRSH 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K D + T L Y EV+P SSV G L A+ Sbjct: 113 KPIILAVNKCDNVGETPM--------ELYEFYNLGFDEVMPISSVHGHGTGDLLDAVCAH 164 Query: 210 INY 212 +++ Sbjct: 165 LDF 167 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 16/194 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F V E +P +A GR NVGKSSL N ++ + +N G T+ Sbjct: 167 FSETVVEEDRIP------VAIIGRPNVGKSSLTNRILGENRM-IVANEAGTTRDAI---- 215 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + N D G ++ + ++VR L+ R +L+D G Sbjct: 216 --DTPVDNAYGKFIFTDTAGLRKRSNITDGLERY--MVVRALAAVERSRVALILVDATVG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTS 192 + D V + + + IV+ K D + + + + + +I S Sbjct: 272 FTEQDSKVAGYAHDQGKACIIVVNKWDAVEGKETNTMELQRRGYAECFSFMGYAPIIFIS 331 Query: 193 SVKRKGIEVLRKAI 206 + + L + I Sbjct: 332 AQTGYNVNKLMQLI 345 >gi|251788752|ref|YP_003003473.1| GTP-binding protein EngA [Dickeya zeae Ech1591] gi|247537373|gb|ACT05994.1| small GTP-binding protein [Dickeya zeae Ech1591] Length = 497 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 81/194 (41%), Gaps = 15/194 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P + LP ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 202 APNLEGLP----IKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRDSIYI------ 250 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 251 PMERDGRDYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 308 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS +E +++T +R + S++ Sbjct: 309 DLSLLGFILNSGRSLVIVVNKWDGLSQ-EVKEQVKETLD-LRLGFIDFARIHFISALHGS 366 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 367 GVGNLFESVTEAYD 380 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGNEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V L+D R G+ D + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADIVLFLVDARDGLMPADHAIAQHLRTR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V KID + T Y EV P ++ +G+ L + +L Sbjct: 110 EKDTFLVANKIDGIDIDT---------GTADFYSLGLGEVYPIAASHGRGVTALLEKVL 159 >gi|156932946|ref|YP_001436862.1| GTP-binding protein EngA [Cronobacter sakazakii ATCC BAA-894] gi|166198713|sp|A7MGU7|DER_ENTS8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|156531200|gb|ABU76026.1| hypothetical protein ESA_00749 [Cronobacter sakazakii ATCC BAA-894] Length = 492 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 11/192 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E P+ P ++A GR NVGKS+L N ++ + + PG T+ + + Sbjct: 195 EDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PM 247 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 248 ERDGREFVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDL 305 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + F+ S IV+ K D LS +E E Y + V S++ G+ Sbjct: 306 SLLGFILNSGRSLVIVVNKWDGLSQEVKEEVKETLDYRLG--FIDFARVHFISALHGSGV 363 Query: 200 EVLRKAILETIN 211 L +++ E + Sbjct: 364 GNLFESVREAYD 375 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGSEEGVETR-----MAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A + Y E+ P ++ +G+ L + +L Sbjct: 110 QKPTFLVANKTDGLDPDQA---------VSDFYSLGLGEIHPIAASHGRGVTSLLEHVL 159 >gi|50122138|ref|YP_051305.1| GTP-binding protein EngA [Pectobacterium atrosepticum SCRI1043] gi|81827050|sp|Q6D280|DER_ERWCT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|49612664|emb|CAG76114.1| probable GTP-binding protein [Pectobacterium atrosepticum SCRI1043] Length = 495 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + + Sbjct: 200 DFNPEDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMVR 252 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G + V+ + +++ L V L+ID R G+ D + Sbjct: 253 DEREYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSL 310 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS + + +R + S++ G+ Sbjct: 311 LGFILNSGRSLVIVMNKWDGLSQEVRDQVKDTLD--LRLGFIDFARIHFISALHGSGVGN 368 Query: 202 LRKAILET 209 L +++ E Sbjct: 369 LFESVTEA 376 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAGQSLVAIEEADIVLFMVDARAGLMPADEGIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P Y EV ++ +G+ L + +L Sbjct: 110 EKMTVLVANKTDGLDPDMVTA---------DFYSLGMGEVYAIAASHGRGVTSLLETVL 159 >gi|227328671|ref|ZP_03832695.1| GTP-binding protein EngA [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 495 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 76/188 (40%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + + Sbjct: 200 DFNPEDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRDSIYI------PMVR 252 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G + V+ + +++ L V L+ID R G+ D + Sbjct: 253 DEREYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSL 310 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D +S ++ E +R + S++ G+ Sbjct: 311 LGFILNSGRSLVIVVNKWDGMSQEAREQVKETLD--MRLGFIDFARIHFISALHGSGVGN 368 Query: 202 LRKAILET 209 L +++ E Sbjct: 369 LFESVTEA 376 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 VDTGGI---DGTEDGVET--RMAGQSLVAIEEADIVLFMVDARAGLMPADEGIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D L P Y EV ++ +G+ L + +L Sbjct: 110 EKTTVLVANKTDGLDPDMVTA---------DFYSLGMGEVYAIAASHGRGVTSLLETVL 159 >gi|253988871|ref|YP_003040227.1| GTP-binding protein EngA [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780321|emb|CAQ83482.1| gtp-binding protein enga (double era-like domain protein) [Photorhabdus asymbiotica] Length = 499 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 205 DFDPSTLPLKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 257 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G + V+ + +++ L V L+ID R G+ D + Sbjct: 258 DGREYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSL 315 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S I + K D +S ++ E Y + V S++ G+ Sbjct: 316 LGFILNSGRSLVIAVNKWDGMSQEDKEQVKEMLDYRLG--FVDFARVHFISALHGSGVGN 373 Query: 202 LRKAILETIN 211 L +ILE + Sbjct: 374 LFDSILEAYD 383 Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 7 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGQEFII 59 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D + L + Sbjct: 60 IDTGGI---DGTEDGVETH--MAAQSLMAIEEADIVLFMVDARAGLMPADHAIAKHLRSR 114 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + T + Y ++ ++ +G+ L + +L Sbjct: 115 EKATFLVANKTDGIDIDT---------SIAEFYSLGLGDIYSIAASHGRGVTQLIERVL 164 >gi|157371840|ref|YP_001479829.1| GTP-binding protein EngA [Serratia proteamaculans 568] gi|166920103|sp|A8GHW1|DER_SERP5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157323604|gb|ABV42701.1| small GTP-binding protein [Serratia proteamaculans 568] Length = 494 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 11/191 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 197 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------P 249 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + + L+D G + V+ + +++ L V L++D R G+ D Sbjct: 250 MVRDEREYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVVDAREGISDQD 307 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D +S E +R + S++ G Sbjct: 308 LSLLGFILNSGRSLVIVVNKWDGMSEEDRDHVKEMLD--LRLGFVDFARIHFISALHGSG 365 Query: 199 IEVLRKAILET 209 + L ++LE Sbjct: 366 VGNLFVSVLEA 376 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGNEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + V++ + + L V ++D R G+ D + L + Sbjct: 55 VDTGGI---DGTEDGVET--RMAGQSLLAIEEADIVLFMVDARAGLMPADLGIAQHLRNR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + P A Y +V P ++ +G+ L + +L Sbjct: 110 QKATFLVANKTDGMDPDMAAA---------DFYSLGLGDVHPIAASHGRGVAQLIEHVL 159 >gi|294637684|ref|ZP_06715962.1| ribosome-associated GTPase EngA [Edwardsiella tarda ATCC 23685] gi|291089160|gb|EFE21721.1| ribosome-associated GTPase EngA [Edwardsiella tarda ATCC 23685] Length = 496 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 204 PIGQPIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDER 256 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 257 EYVLIDTAGVRKRGKVTDTVEKFS--VIKTLQAIEDANVVLLVIDARQGISDQDLSLLGF 314 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S +V+ K D LS ++ + +R + S++ G+ L + Sbjct: 315 ILNSGRSLVVVVNKWDGLSLEVKEQVKDMLD--LRLGFVDFARIHFISALHGSGVGNLFE 372 Query: 205 AILET 209 +I E Sbjct: 373 SIQEA 377 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 24/182 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + N + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVNGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V L+D R G+ D+ + L + Sbjct: 55 IDTGGI---DGSENGVETH--MAEQSLLAIEEADIVLFLVDARSGLLPADEAIARHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 S +V K D + A + Y EV P ++ +G+ L I + Sbjct: 110 DKSTFLVANKTDGIDADVA---------IGDFYSLGLGEVHPIAASHGRGVTQL---IED 157 Query: 209 TI 210 + Sbjct: 158 AL 159 >gi|311278558|ref|YP_003940789.1| ribosome-associated GTPase EngA [Enterobacter cloacae SCF1] gi|308747753|gb|ADO47505.1| ribosome-associated GTPase EngA [Enterobacter cloacae SCF1] Length = 492 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 197 DFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMER 249 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 250 DEREYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSL 307 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E Y + V S++ G+ Sbjct: 308 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDYRLG--FIDFARVHFISALHGSGVGN 365 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 366 LFESVREAYD 375 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRAR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + P A + + E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGIDPDQA---------VSDFWSLGLGEIYPIAASHGRGVTSLLEHVL 159 >gi|237732490|ref|ZP_04562971.1| GTP-binding protein EngA [Citrobacter sp. 30_2] gi|226908029|gb|EEH93947.1| GTP-binding protein EngA [Citrobacter sp. 30_2] Length = 504 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 206 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------P 258 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 259 MQRDEREYVLIDTAGVRKRGKITEAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQD 316 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D L+ ++ E + + V S++ G Sbjct: 317 LSLLGFILNSGRSLVIVVNKWDGLTQEVKEQVKETLDFRLG--FIDFARVHFISALHGSG 374 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 375 VGNLFESVREAYD 387 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 16 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 68 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 69 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 123 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 124 QKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 173 >gi|15668495|ref|NP_247293.1| GTP-binding protein [Methanocaldococcus jannaschii DSM 2661] gi|2501554|sp|Q57768|ENGB_METJA RecName: Full=Probable GTP-binding protein EngB gi|1591040|gb|AAB98305.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 219 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 26/194 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GRSNVGKS+ + ++ RK++ R PG T +N + ++ LVDM Sbjct: 27 VIVVGRSNVGKSTFVRLMTGRKDI-RVGKKPGVTLKINEY----------DMGEYILVDM 75 Query: 92 PGYGY-ARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-----------HGVKQID 138 PG+GY A PKK + IV Y+ E + + +ID + G ID Sbjct: 76 PGFGYMAGLPKKVQEKIKDEIVHYIEEHADEIAAAVQIIDTKSFFEIVERWKGRGEIPID 135 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKR 196 ++F F+ +S +V K+DK+ L+ ++ P H ++P + Sbjct: 136 LEMFDFITDLKISPILVANKMDKIKKEEWDAVLDGICEYLKCQPPWHQWKFIVPAILKEG 195 Query: 197 KGIEVLRKAILETI 210 KGIE ++K ILE + Sbjct: 196 KGIEEIKKKILERV 209 >gi|289619342|emb|CBI53625.1| unnamed protein product [Sordaria macrospora] Length = 556 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 79/206 (38%), Gaps = 53/206 (25%) Query: 6 IFTKSAWIFLRGVPEIGLLPKAG-PPEIAFSGRSNVGKSSLINIL--------------- 49 IFT F+ P P PE+ GRSNVGKS+LIN L Sbjct: 220 IFTCQKPYFMYAAPRFLNFPVNTYVPEVCILGRSNVGKSTLINALSGAAGAAAGRAHGLE 279 Query: 50 VNRKNLARTSNAPGRTQHLNFF--------------------------------VPKDFS 77 R A TS G T+ +N + FS Sbjct: 280 ARRAGRAITSAHAGSTKTMNAYGFGPPPKVAPPKKEADPEDGESRVKSRSEKREEKNKFS 339 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + LVDMPGYG+ + WG IV+YL +R L+ +LID GVK+ Sbjct: 340 KERKPTNQLILVDMPGYGFNSQAE-----WGKEIVKYLEKRQMLKGAVVLIDSVAGVKKD 394 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLS 163 D+ V L V ++LTK DK+ Sbjct: 395 DRTVLGMLRDAGVRTTVILTKADKID 420 >gi|300717947|ref|YP_003742750.1| GTP-binding protein [Erwinia billingiae Eb661] gi|299063783|emb|CAX60903.1| GTP-binding protein [Erwinia billingiae Eb661] Length = 495 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 E P P ++A GR NVGKS+L N ++ + +APG T+ + Sbjct: 198 AEDNFNPLDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDAPGTTRDSIYI------P 250 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 251 MERDGREYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQD 308 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D LS E E + + V S++ G Sbjct: 309 LSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLG--FIDFARVHFISALHGSG 366 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 367 VGNLFESVTEAYD 379 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 67/180 (37%), Gaps = 21/180 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L + ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGQQFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L+ V ++D R G+ D + L + Sbjct: 55 IDTGGIDGNEEGVETRMAAQSLL-----AIEEADVVLFMVDARAGLMPADIAIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K D L P +A ++ Y E+ ++ +G+ L + +LE Sbjct: 110 EKPTFLVANKTDGLDPDSA---------VVDFYSLGLGEIHAIAASHGRGVASLLEDVLE 160 >gi|260598897|ref|YP_003211468.1| GTP-binding protein Der [Cronobacter turicensis z3032] gi|260218074|emb|CBA32819.1| GTP-binding protein engA [Cronobacter turicensis z3032] Length = 492 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 200 PQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGR 252 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 253 EFVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 310 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D LS E E Y + V S++ G+ L + Sbjct: 311 ILNSGRSLVIVVNKWDGLSQEVKDEVKETLDYRLG--FIDFARVHFISALHGSGVGNLFE 368 Query: 205 AILETIN 211 ++ E + Sbjct: 369 SVREAYD 375 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 66/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G A + + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGAEEGVETR-----MAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A + Y E+ P ++ +G+ L + +L Sbjct: 110 QKPTFLVANKTDGLDPDQA---------VADFYSLGLGEIHPIAASHGRGVTSLLEHVL 159 >gi|205353618|ref|YP_002227419.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690507|sp|B5RCY8|DER_SALG2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|205273399|emb|CAR38374.1| putative GTP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326628718|gb|EGE35061.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 490 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 191 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 243 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 244 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D LS ++ E + + V S++ Sbjct: 302 DLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGS 359 Query: 198 GIEVLRKAILETIN 211 + L +++ E + Sbjct: 360 DVGNLFESVREAYD 373 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|85077909|ref|XP_956077.1| hypothetical protein NCU04081 [Neurospora crassa OR74A] gi|28917122|gb|EAA26841.1| predicted protein [Neurospora crassa OR74A] Length = 498 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 78/210 (37%), Gaps = 54/210 (25%) Query: 6 IFTKSAWIFLRGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINIL--------------- 49 IFT F+ P P PE+ GRSNVGKS+LIN L Sbjct: 164 IFTCQKPYFMYAAPRFLNFPVNTHVPEVCILGRSNVGKSTLINALSGAAGAAAGRAHGLE 223 Query: 50 VNRKNLARTSNAPGRTQHLNFF---------------------------------VPKDF 76 R A TS G T+ +N + F Sbjct: 224 ARRAGRAITSAHAGSTKTMNAYGFGPPPKVAPPKKEAEPEAGESHAIKSRSEKREEKNKF 283 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + + + LVDMPGYG+ + WG I +YL +R L+ +LID GVK+ Sbjct: 284 NKERKPTNQLILVDMPGYGFNSQAE-----WGKEITKYLEKRKMLKGAVVLIDSVAGVKK 338 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 D+ V L V ++LTK DK+ Sbjct: 339 DDRTVLGMLRDAGVRTTVILTKADKIDSME 368 >gi|261340815|ref|ZP_05968673.1| ribosome-associated GTPase EngA [Enterobacter cancerogenus ATCC 35316] gi|288317241|gb|EFC56179.1| ribosome-associated GTPase EngA [Enterobacter cancerogenus ATCC 35316] Length = 491 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 199 PQDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMQRDER 251 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 252 EFVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 309 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D LS ++ E + + V S++ G+ L + Sbjct: 310 ILNSGRSLVIVVNKWDGLSNEVREQVKETLDFRLG--FIDFARVHFISALHGSGVGNLFE 367 Query: 205 AILETIN 211 ++ E + Sbjct: 368 SVREAYD 374 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 65/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADSAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + A + + + P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGIDADQA---------VADFWSLGLGNIYPIAASHGRGVTSLLETVL 159 >gi|331658656|ref|ZP_08359600.1| ribosome-associated GTPase EngA [Escherichia coli TA206] gi|331054321|gb|EGI26348.1| ribosome-associated GTPase EngA [Escherichia coli TA206] Length = 396 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 208 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 260 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 261 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 318 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 319 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 376 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 377 LFESVREAYD 386 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 15 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 67 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 68 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSR 122 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 123 EKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLEHVL 172 >gi|188997363|ref|YP_001931614.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1] gi|229807528|sp|B2V5W6|DER_SULSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|188932430|gb|ACD67060.1| small GTP-binding protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 445 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 78/180 (43%), Gaps = 11/180 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 ++A G+ N GKSSLIN L+N + + S PG T+ + + + Sbjct: 180 DYIKVAIVGKPNAGKSSLINALLNEERV-LVSEIPGTTRDTVDILY------EKDGQKFL 232 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G ++ + + R + V L+ID G + D + + + Sbjct: 233 FLDTAGMRKKSKVDFGLEFFS--VGRTIEAIEKADVVVLVIDANQGATEQDTKIAGLIQR 290 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + IV+ KID + T ++ ++ + + Y ++ ++ TS+ ++G++ L + I+ Sbjct: 291 RYKPAVIVINKIDTVDKKTLEKVEKQVRERL--YFISYAPIVFTSAKTKEGLDELLEKIV 348 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKSSL N ++ ++ A + PG T+ S + +VD Sbjct: 4 VAIVGIPNVGKSSLFNRIIGQRK-AIVEDIPGVTRDRIV------STAEWRGVKFEVVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTL-RCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 GY + D + I + + + L ++D + G+ +D+++ + L + Sbjct: 57 GGYI-----TGDEDKFAPYIRKQVEKELELSDLFIFVVDGKQGLTPLDKEIANILHRTEK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KID EK K Y +IP S++++ G+ L ++E I Sbjct: 112 PVIVAVNKID---------DPEKEKLAYEFYELGFENIIPISAIQKLGLAELLDKVVEYI 162 >gi|259907722|ref|YP_002648078.1| GTP-binding protein EngA [Erwinia pyrifoliae Ep1/96] gi|224963344|emb|CAX54829.1| GTP-binding protein [Erwinia pyrifoliae Ep1/96] gi|283477576|emb|CAY73492.1| GTP-binding protein engA [Erwinia pyrifoliae DSM 12163] gi|310764770|gb|ADP09720.1| GTP-binding protein EngA [Erwinia sp. Ejp617] Length = 498 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 75/195 (38%), Gaps = 11/195 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 E P P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 197 TAEEDDFNPLDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI----- 250 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 ++ + L+D G + V+ + +++ L V L+ID G+ Sbjct: 251 -PMERDGREYILIDTAGVRKRGKVTETVEKFS--VIKTLKAIEDANVVMLVIDAHEGISD 307 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + F+ S IV+ K D LS E E Y + + S++ Sbjct: 308 QDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKEALDYRLG--FIDFARIHFISALHG 365 Query: 197 KGIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 366 SGVGNLFESVTEAYD 380 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L V ++D R G+ D + L + Sbjct: 55 IDTGGIDGNEEGVETR-----MAEQSLLAIEEADVVLFMVDARAGLMPADVAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 IV K D L +A ++ + E+ P ++ +G+ L + +L Sbjct: 110 QKPTFIVANKTDGLDADSA---------VVDFWSLGLGEIHPIAASHGRGVTSLLELVL 159 >gi|296104190|ref|YP_003614336.1| GTP-binding protein EngA [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058649|gb|ADF63387.1| GTP-binding protein EngA [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 511 Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 219 PQDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDER 271 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 272 EYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 329 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D LS ++ E + + V S++ G+ L Sbjct: 330 ILNSGRSLVIVVNKWDGLSNEVREQVKETLDFRLG--FIDFARVHFISALHGSGVGNLFD 387 Query: 205 AILETIN 211 ++ E + Sbjct: 388 SVREAYD 394 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 22 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 74 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D + L + Sbjct: 75 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADSAIAKHLRSR 129 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + A + + ++ P ++ +G+ L + +L Sbjct: 130 EKPTFLVANKTDGIDADQA---------IADFWSLGLGDIYPIAASHGRGVTSLLETVL 179 >gi|307132056|ref|YP_003884072.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Dickeya dadantii 3937] gi|306529585|gb|ADM99515.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Dickeya dadantii 3937] Length = 495 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 15/194 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P + LP ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 200 APNLEGLP----IKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRDSIYI------ 248 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 249 PMERDGRDYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 306 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D L+ + E +R + S++ Sbjct: 307 DLSLLGFILNSGRSLVIVVNKWDGLTQEIKDQVKETLD--LRLGFIDFARIHFISALHGS 364 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 365 GVGNLFESVTEAYD 378 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGNEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V L+D R G+ D + L + Sbjct: 55 IDTGGI---DGNEDGVET--RMAEQSLLAIEEADIVLFLVDARDGLMPADHAIAQHLRMR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K+D + T + Y EV P ++ +G+ L + +L Sbjct: 110 EKDTFLVANKVDGIDIDT---------GIADFYSLGLGEVHPIAASHGRGVTSLLEKVL 159 >gi|317490873|ref|ZP_07949309.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920420|gb|EFV41743.1| ribosome-associated GTPase EngA [Enterobacteriaceae bacterium 9_2_54FAA] Length = 495 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P +IA GR NVGKS+L N ++ + + PG T+ + + + Sbjct: 203 PQDLPIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMVRDER 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L L+ID R G+ D + F Sbjct: 256 EYVLIDTAGVRKRGKVTDTVEKFS--VIKTLQAIEDSNVALLVIDAREGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D LS + E +R + S++ G+ L + Sbjct: 314 ILNSGRSLVIVVNKWDGLSEDVKTQVKEMLD--LRLGFVDFARIHFISALHGSGVGNLFE 371 Query: 205 AILETIN 211 +I E + Sbjct: 372 SIQEAYD 378 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 24/182 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L + ++ A ++ PG T+ + + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVSGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTENGVETH--MAEQSLMAIEEADIVLFMVDARAGLMPADEGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V K D + P A + Y EV P ++ +G+ L I E Sbjct: 110 EKATFLVANKTDGIDPDVA---------IGDFYSLGFGEVYPIAASHGRGVAQL---IEE 157 Query: 209 TI 210 + Sbjct: 158 AL 159 >gi|238753871|ref|ZP_04615231.1| GTP-binding protein engA [Yersinia ruckeri ATCC 29473] gi|238707859|gb|EEQ00217.1| GTP-binding protein engA [Yersinia ruckeri ATCC 29473] Length = 496 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 11/192 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E P++ P ++A GR NVGKS+L N ++ + + + PG T+ + + Sbjct: 200 EDDFDPRSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PM 252 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 253 IRDEREYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQDL 310 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + F+ S I + K D ++ + + + +R + S++ G+ Sbjct: 311 SLLGFILNSGRSLVIAVNKWDGMTEEARTQVKDMLE--LRLGFVDFARIHFISALHGSGV 368 Query: 200 EVLRKAILETIN 211 L ++ILE + Sbjct: 369 GNLFESILEAYD 380 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 21/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V K D + P A Y EV P ++ +G+ L + + Sbjct: 110 QKATFLVANKTDGMEPEAAAA---------DFYSLGMGEVHPIAASHGRGVAQLIEEV 158 >gi|300904315|ref|ZP_07122172.1| ribosome-associated GTPase EngA [Escherichia coli MS 84-1] gi|300403747|gb|EFJ87285.1| ribosome-associated GTPase EngA [Escherichia coli MS 84-1] Length = 492 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|284006778|emb|CBA72042.1| GTP-binding protein [Arsenophonus nasoniae] Length = 493 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 11/195 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L E P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 192 LESSEEEAFDPRSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDLPGTTRDSIYI--- 247 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 ++ + L+D G + V+ + +++ L V L+ID R G+ Sbjct: 248 ---PMERDGCEYVLIDTAGVRKRGKITETVEKFS--VIKTLQSIEDANVVLLVIDARQGI 302 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D + F+ S I + K D +S Q + +R +V S++ Sbjct: 303 SDQDLSLLGFILNAGRSLVIAVNKWDGMSQEDRQSVKDMLD--LRLGFIDFAKVHFISAL 360 Query: 195 KRKGIEVLRKAILET 209 G+ L ++I E Sbjct: 361 HGSGVGNLFESIQEA 375 Score = 94.5 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GKAEFAGQEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ +++ + + L V+ ++D R G+ D + L + Sbjct: 55 IDTGGI---DGSEEGIENH--MASQSLLAIEEADIVFFMVDVRSGLMPADHAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 ++ K D L T L Y ++ P ++ +G+ L + ++ Sbjct: 110 KKETYLLANKTDGLDIDTV---------LGDFYALGMRDIYPIAASHGRGVTQLIEKVV 159 >gi|153005016|ref|YP_001379341.1| GTP-binding protein EngA [Anaeromyxobacter sp. Fw109-5] gi|152028589|gb|ABS26357.1| small GTP-binding protein [Anaeromyxobacter sp. Fw109-5] Length = 471 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 26/197 (13%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 P P + +A GR NVGKS+L N L R+ A + PG T+ N+ Sbjct: 1 MSAPA----PPSPRALVALVGRPNVGKSTLFNRLAGRRA-AIVQDVPGVTRDRNY----- 50 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPK--KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ + A+++VD G+ + V L V V L++D R G Sbjct: 51 -ADFSFDGRALSVVDTGGFEPESRDRLMSQVRQQAQLAV------EEAAAVVLVVDGREG 103 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + +D+ V L + + + K+D E+ L Y EV S+ Sbjct: 104 LTAVDRSVADLLRRAGKPLFVAVNKVD-------TARTEEEIPLAEFYQLGFGEVHSVSA 156 Query: 194 VKRKGIEVLRKAILETI 210 +G+ L +AI+E + Sbjct: 157 EHGRGVGDLVEAIVEKL 173 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 70/175 (40%), Gaps = 10/175 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PK +A GR NVGKS+ +N L+ + S+ PG T+ S ++ Sbjct: 197 PKGDI-RLAIVGRPNVGKSTFVNSLLGHERFV-VSDVPGTTRDAI------DSLVEQRGQ 248 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + D G A + V+++ +VR + V L+D + D + Sbjct: 249 RFVVTDTAGIRRKSAIAQAVEAYS--VVRSMKAIDRAEVVACLLDATEAGVEQDARLLGL 306 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + +KA + +V+ K D A + + + R + ++ S+ + +G+ Sbjct: 307 IAEKAKALLVVINKWDIAEREGATQDWYRKELHKRLPFVSFAPMLFVSAKEGRGV 361 >gi|296110038|ref|YP_003616987.1| GTP-binding protein HSR1-related protein [Methanocaldococcus infernus ME] gi|295434852|gb|ADG14023.1| GTP-binding protein HSR1-related protein [Methanocaldococcus infernus ME] Length = 193 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 95/195 (48%), Gaps = 25/195 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++ GRSNVGKS+L+ +L K + R PG T +N + K+++ LV Sbjct: 3 PKVVVVGRSNVGKSTLVRLLTGDKRV-RVGKRPGVTLRINEYELKNYT----------LV 51 Query: 90 DMPGYGYAR-APKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVK----------QI 137 DMPG+G+ + PK+ + IVRYL E + + +ID + ++ I Sbjct: 52 DMPGFGFIKGRPKEIEERVKDNIVRYLEENADQIATAIQIIDGKSFIEIVERWKDKEIPI 111 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVK 195 D ++F F+ + +S +V+ K+DK+ + L ++ P H ++P K Sbjct: 112 DIEMFDFITELKISPILVVNKMDKIKKNERDKILNSICEYLKMSPPWHQWKFIVPACLKK 171 Query: 196 RKGIEVLRKAILETI 210 +G++ +++ I + + Sbjct: 172 GEGLDEIKRLINKRV 186 >gi|333002306|gb|EGK21870.1| small GTP-binding domain protein [Shigella flexneri K-272] gi|333016129|gb|EGK35461.1| small GTP-binding domain protein [Shigella flexneri K-227] Length = 490 Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|146312646|ref|YP_001177720.1| GTP-binding protein EngA [Enterobacter sp. 638] gi|166920100|sp|A4WD89|DER_ENT38 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145319522|gb|ABP61669.1| small GTP-binding protein [Enterobacter sp. 638] Length = 490 Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P P+ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 192 PVDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------P 244 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 245 MQRDEREYVLIDTAGVRKRGKITDVVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQD 302 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D LS ++ E + + + S++ G Sbjct: 303 LSLLGFILNSGRSLVIVVNKWDGLSNDVREQVKEMLDFRLG--FIDFARIHFISALHGSG 360 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 361 VGNLFESVREAYD 373 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 66/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADIVLFMVDARAGLMPADTAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + A + + E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGIDADQA---------VADFWALGLGEIYPIAASHGRGVTSLLETVL 159 >gi|322831770|ref|YP_004211797.1| ribosome-associated GTPase EngA [Rahnella sp. Y9602] gi|321166971|gb|ADW72670.1| ribosome-associated GTPase EngA [Rahnella sp. Y9602] Length = 494 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E P++ P ++A GR NVGKS+L N ++ + + + PG T+ + + Sbjct: 197 EDNFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PM 249 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 250 VRDEREYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDL 307 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + F+ S IV+ K D +S + ++ +R + S++ G+ Sbjct: 308 SLLGFILNSGRSLVIVVNKWDGMSEEARAQVKDQLD--LRLGFVDFARIHFISALHGSGV 365 Query: 200 EVLRKAILET 209 L +++ E Sbjct: 366 GNLFESVNEA 375 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTKTRD-ALVADFPGLTRDRKY------GRAEIEGNEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 VDTGGI---DGTEDGVET--RMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D L P +A Y +V ++ +G+ L + +L Sbjct: 110 EKATFLVANKTDGLDPDSATG---------DFYSLGLGDVYAIAASHGRGVTQLIEHVL 159 >gi|81246371|gb|ABB67079.1| putative GTP-binding factor [Shigella boydii Sb227] Length = 503 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 208 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 260 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 261 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 318 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 319 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 376 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 377 LFESVREAYD 386 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 15 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 67 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 68 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 122 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 123 EKPTFLVVNKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 172 >gi|300920666|ref|ZP_07137077.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1] gi|300412347|gb|EFJ95657.1| ribosome-associated GTPase EngA [Escherichia coli MS 115-1] Length = 499 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAACHGRGVLSLLEHVL 168 >gi|331648208|ref|ZP_08349298.1| ribosome-associated GTPase EngA [Escherichia coli M605] gi|26109281|gb|AAN81483.1|AE016764_165 Probable GTP-binding protein engA [Escherichia coli CFT073] gi|331043068|gb|EGI15208.1| ribosome-associated GTPase EngA [Escherichia coli M605] Length = 503 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 208 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 260 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 261 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 318 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 319 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 376 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 377 LFESVREAYD 386 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 15 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 67 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 68 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 122 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 123 EKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLEHVL 172 >gi|293394879|ref|ZP_06639169.1| ribosome-associated GTPase EngA [Serratia odorifera DSM 4582] gi|291422630|gb|EFE95869.1| ribosome-associated GTPase EngA [Serratia odorifera DSM 4582] Length = 497 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 11/191 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 198 PEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------P 250 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + + L+D G + V+ + +++ L V L++D R G+ D Sbjct: 251 MVRDEREYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVVDAREGISDQD 308 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S I + K D +S E +R V S++ G Sbjct: 309 LSLLGFILNSGRSLVIAVNKWDGMSEEDRDHVKEMLD--LRLGFVDFARVHFISALHGSG 366 Query: 199 IEVLRKAILET 209 + L +++ E Sbjct: 367 VGNLFESVQEA 377 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGNEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + P A + +V P ++ +G+ L + +L Sbjct: 110 RKATFLVANKTDGMDPDLATA---------DFFSLGLGDVHPIAASHGRGVAQLIEHVL 159 >gi|81242044|gb|ABB62754.1| putative GTP-binding factor [Shigella dysenteriae Sd197] Length = 503 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 208 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 260 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 261 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 318 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 319 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 376 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 377 LFESVREAYD 386 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 15 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 67 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 68 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 122 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 123 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 172 >gi|270264725|ref|ZP_06192990.1| GTP-binding protein EngA [Serratia odorifera 4Rx13] gi|270041408|gb|EFA14507.1| GTP-binding protein EngA [Serratia odorifera 4Rx13] Length = 493 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + + PG T+ + + + Sbjct: 201 PQDLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMVRDER 253 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L++D R G+ D + F Sbjct: 254 EYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVVDAREGISDQDLSLLGF 311 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D +S + E +R + S++ G+ L Sbjct: 312 ILNSGRSLVIVVNKWDGMSEEDREHVKEMLD--LRLGFVDFARIHFISALHGSGVGNLFV 369 Query: 205 AILET 209 ++LE Sbjct: 370 SVLEA 374 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGNEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 VDTGGI---DGTEDGVET--RMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRNR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + P A Y +V ++ +G+ L + +L Sbjct: 110 QKATFLVANKTDGMDPDMATA---------DFYSLGLGDVHAIAASHGRGVAQLIEHVL 159 >gi|188533178|ref|YP_001906975.1| GTP-binding protein EngA [Erwinia tasmaniensis Et1/99] gi|238689730|sp|B2VE93|DER_ERWT9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|188028220|emb|CAO96078.1| GTP-binding protein [Erwinia tasmaniensis Et1/99] Length = 499 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 75/192 (39%), Gaps = 11/192 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E P P ++A GR NVGKS+L N ++ + + PG T+ + + Sbjct: 201 EDDFNPLDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PM 253 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + + L+D G + V+ + +++ L V L+ID G+ D Sbjct: 254 ERDGREYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVMLVIDAHEGISDQDL 311 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + F+ S IV+ K D LS E E Y + + S++ G+ Sbjct: 312 SLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKEALDYRLG--FIDFARIHFISALHGSGV 369 Query: 200 EVLRKAILETIN 211 L +++ E + Sbjct: 370 GNLFESVTEAYD 381 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L V ++D R G+ D + L + Sbjct: 55 IDTGGIDGNEEGVETR-----MAEQSLLAIEEADVVLFMVDARAGLMPADTAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L +A ++ + E+ P ++ +G+ L + +L Sbjct: 110 QKPTFLVANKTDGLDADSA---------VVDFWSLGLGEIHPIAASHGRGVTSLLELVL 159 >gi|85059734|ref|YP_455436.1| GTP-binding protein EngA [Sodalis glossinidius str. 'morsitans'] gi|123519082|sp|Q2NS44|DER_SODGM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|84780254|dbj|BAE75031.1| putative GTP-binding protein [Sodalis glossinidius str. 'morsitans'] Length = 488 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + + + Sbjct: 196 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMVRDER 248 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 249 EYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 306 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D LS T E E + + V S++ G+ L + Sbjct: 307 ILNSGRSLVIAVNKWDGLSSETRDEVKEALDHRLG--FIDFARVHFISALHGSGVGNLFE 364 Query: 205 AILET 209 ++ E Sbjct: 365 SVNEA 369 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRK-YCRAEWEGHE-----FIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGTEEGVETRMAGQSLV-----AIEEADIVLFMVDGRAGLMAADKGIARHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + IV K D + +A + Y E++P ++ +GI L + +L Sbjct: 110 EKTTVIVANKTDGIDADSA---------VGDFYSLGMGEIVPIAASHGRGINSLLEQVL 159 >gi|331643131|ref|ZP_08344266.1| ribosome-associated GTPase EngA [Escherichia coli H736] gi|331653939|ref|ZP_08354940.1| ribosome-associated GTPase EngA [Escherichia coli M718] gi|331678502|ref|ZP_08379177.1| ribosome-associated GTPase EngA [Escherichia coli H591] gi|332278336|ref|ZP_08390749.1| conserved hypothetical protein [Shigella sp. D9] gi|25328223|pir||E91050 probable GTP-binding factor [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) gi|25328252|pir||A85895 probable GTP-binding factor Z3774 [imported] - Escherichia coli (strain O157:H7, substrain EDL933) gi|12516902|gb|AAG57621.1|AE005480_8 putative GTP-binding factor [Escherichia coli O157:H7 str. EDL933] gi|13362843|dbj|BAB36796.1| putative GTP-binding factor [Escherichia coli O157:H7 str. Sakai] gi|209763418|gb|ACI80021.1| putative GTP-binding factor [Escherichia coli] gi|209763420|gb|ACI80022.1| putative GTP-binding factor [Escherichia coli] gi|209763422|gb|ACI80023.1| putative GTP-binding factor [Escherichia coli] gi|209763426|gb|ACI80025.1| putative GTP-binding factor [Escherichia coli] gi|331039929|gb|EGI12149.1| ribosome-associated GTPase EngA [Escherichia coli H736] gi|331048788|gb|EGI20864.1| ribosome-associated GTPase EngA [Escherichia coli M718] gi|331074962|gb|EGI46282.1| ribosome-associated GTPase EngA [Escherichia coli H591] gi|332100688|gb|EGJ04034.1| conserved hypothetical protein [Shigella sp. D9] Length = 503 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 208 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 260 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 261 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 318 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 319 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 376 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 377 LFESVREAYD 386 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 15 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 67 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 68 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 122 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 123 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 172 >gi|332087958|gb|EGI93083.1| small GTP-binding domain protein [Shigella boydii 5216-82] Length = 490 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|161950068|ref|YP_404245.2| GTP-binding protein EngA [Shigella dysenteriae Sd197] gi|309784738|ref|ZP_07679371.1| small GTP-binding domain protein [Shigella dysenteriae 1617] gi|308927108|gb|EFP72582.1| small GTP-binding domain protein [Shigella dysenteriae 1617] Length = 490 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|117624740|ref|YP_853653.1| GTP-binding protein EngA [Escherichia coli APEC O1] gi|237705021|ref|ZP_04535502.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA] gi|91073411|gb|ABE08292.1| probable GTP-binding protein EngA [Escherichia coli UTI89] gi|115513864|gb|ABJ01939.1| putative GTP-binding protein EngA [Escherichia coli APEC O1] gi|226901387|gb|EEH87646.1| GTP-binding protein EngA [Escherichia sp. 3_2_53FAA] Length = 503 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 208 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 260 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 261 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 318 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 319 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 376 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 377 LFESVREAYD 386 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 15 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 67 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 68 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSR 122 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 123 EKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLEHVL 172 >gi|56480123|ref|NP_708350.2| GTP-binding protein EngA [Shigella flexneri 2a str. 301] gi|161984887|ref|YP_408907.2| GTP-binding protein EngA [Shigella boydii Sb227] gi|56383674|gb|AAN44057.2| putative GTP-binding factor [Shigella flexneri 2a str. 301] Length = 490 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVVNKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|110642676|ref|YP_670406.1| GTP-binding protein EngA [Escherichia coli 536] gi|161486155|ref|NP_754915.2| GTP-binding protein EngA [Escherichia coli CFT073] gi|191172582|ref|ZP_03034121.1| ribosome-associated GTPase EngA [Escherichia coli F11] gi|218701021|ref|YP_002408650.1| GTP-binding protein EngA [Escherichia coli IAI39] gi|312965427|ref|ZP_07779659.1| small GTP-binding domain protein [Escherichia coli 2362-75] gi|31563151|sp|Q8FF59|DER_ECOL6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123147831|sp|Q0TEX4|DER_ECOL5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226741137|sp|B7NQW0|DER_ECO7I RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|110344268|gb|ABG70505.1| probable GTP-binding protein EngA [Escherichia coli 536] gi|190907055|gb|EDV66655.1| ribosome-associated GTPase EngA [Escherichia coli F11] gi|218371007|emb|CAR18835.1| GTPase involved in ribosome synthesis and maintenance [Escherichia coli IAI39] gi|281179565|dbj|BAI55895.1| putative GTP-binding protein [Escherichia coli SE15] gi|307554534|gb|ADN47309.1| GTP-binding protein EngA [Escherichia coli ABU 83972] gi|312289847|gb|EFR17735.1| small GTP-binding domain protein [Escherichia coli 2362-75] gi|320196348|gb|EFW70972.1| GTP-binding protein EngA [Escherichia coli WV_060327] gi|323188371|gb|EFZ73663.1| small GTP-binding domain protein [Escherichia coli RN587/1] gi|330912286|gb|EGH40796.1| GTP-binding protein EngA [Escherichia coli AA86] Length = 490 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|218548052|ref|YP_002381843.1| GTP-binding protein EngA [Escherichia fergusonii ATCC 35469] gi|331684159|ref|ZP_08384755.1| ribosome-associated GTPase EngA [Escherichia coli H299] gi|226741141|sp|B7LKC7|DER_ESCF3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218355593|emb|CAQ88204.1| GTPase involved in ribosome synthesis and maintenance [Escherichia fergusonii ATCC 35469] gi|323967959|gb|EGB63371.1| ribosome GTPase EngA [Escherichia coli M863] gi|327252218|gb|EGE63890.1| small GTP-binding domain protein [Escherichia coli STEC_7v] gi|331079111|gb|EGI50313.1| ribosome-associated GTPase EngA [Escherichia coli H299] Length = 490 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|324113005|gb|EGC06981.1| ribosome GTPase EngA [Escherichia fergusonii B253] Length = 490 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|320185211|gb|EFW59991.1| GTP-binding protein EngA [Shigella flexneri CDC 796-83] gi|332092745|gb|EGI97814.1| small GTP-binding domain protein [Shigella boydii 3594-74] Length = 490 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|215487861|ref|YP_002330292.1| GTP-binding protein EngA [Escherichia coli O127:H6 str. E2348/69] gi|254783152|sp|B7UGV7|DER_ECO27 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|215265933|emb|CAS10342.1| predicted GTP-binding protein [Escherichia coli O127:H6 str. E2348/69] Length = 490 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|89109317|ref|AP_003097.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr. W3110] gi|90111450|ref|NP_417006.2| GTPase; multicopy suppressor of ftsJ [Escherichia coli str. K-12 substr. MG1655] gi|157156728|ref|YP_001463833.1| GTP-binding protein EngA [Escherichia coli E24377A] gi|157161986|ref|YP_001459304.1| GTP-binding protein EngA [Escherichia coli HS] gi|161367551|ref|NP_289064.2| GTP-binding protein EngA [Escherichia coli O157:H7 EDL933] gi|162139766|ref|NP_311400.2| GTP-binding protein EngA [Escherichia coli O157:H7 str. Sakai] gi|168748430|ref|ZP_02773452.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4113] gi|168756283|ref|ZP_02781290.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4401] gi|168761121|ref|ZP_02786128.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4501] gi|168768603|ref|ZP_02793610.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4486] gi|168773575|ref|ZP_02798582.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4196] gi|168778477|ref|ZP_02803484.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4076] gi|168787857|ref|ZP_02812864.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC869] gi|168798882|ref|ZP_02823889.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC508] gi|170019206|ref|YP_001724160.1| GTP-binding protein EngA [Escherichia coli ATCC 8739] gi|170082121|ref|YP_001731441.1| GTP-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|188494621|ref|ZP_03001891.1| GTP-binding protein EngA [Escherichia coli 53638] gi|191167672|ref|ZP_03029481.1| ribosome-associated GTPase EngA [Escherichia coli B7A] gi|193064026|ref|ZP_03045111.1| ribosome-associated GTPase EngA [Escherichia coli E22] gi|194427302|ref|ZP_03059852.1| ribosome-associated GTPase EngA [Escherichia coli B171] gi|194437572|ref|ZP_03069668.1| ribosome-associated GTPase EngA [Escherichia coli 101-1] gi|195936653|ref|ZP_03082035.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC4024] gi|208814338|ref|ZP_03255667.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4045] gi|208821434|ref|ZP_03261754.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4042] gi|209399678|ref|YP_002271981.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4115] gi|209919988|ref|YP_002294072.1| GTP-binding protein EngA [Escherichia coli SE11] gi|217326913|ref|ZP_03442996.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. TW14588] gi|218555036|ref|YP_002387949.1| GTP-binding protein EngA [Escherichia coli IAI1] gi|218696138|ref|YP_002403805.1| GTP-binding protein EngA [Escherichia coli 55989] gi|238901676|ref|YP_002927472.1| putative GTP-binding protein [Escherichia coli BW2952] gi|253772595|ref|YP_003035426.1| GTP-binding protein EngA [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162485|ref|YP_003045593.1| GTP-binding protein EngA [Escherichia coli B str. REL606] gi|254794457|ref|YP_003079294.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. TW14359] gi|256017341|ref|ZP_05431206.1| GTP-binding protein EngA [Shigella sp. D9] gi|256021803|ref|ZP_05435668.1| GTP-binding protein EngA [Escherichia sp. 4_1_40B] gi|260845141|ref|YP_003222919.1| putative GTP-binding protein Der [Escherichia coli O103:H2 str. 12009] gi|260856605|ref|YP_003230496.1| putative GTP-binding protein Der [Escherichia coli O26:H11 str. 11368] gi|260869200|ref|YP_003235602.1| putative GTP-binding protein Der [Escherichia coli O111:H- str. 11128] gi|261223057|ref|ZP_05937338.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Escherichia coli O157:H7 str. FRIK2000] gi|261259392|ref|ZP_05951925.1| putative GTP-binding protein Der [Escherichia coli O157:H7 str. FRIK966] gi|291283732|ref|YP_003500550.1| GTP-binding protein engA [Escherichia coli O55:H7 str. CB9615] gi|293415776|ref|ZP_06658419.1| ribosome-associated GTPase EngA [Escherichia coli B185] gi|293446864|ref|ZP_06663286.1| ribosome-associated GTPase EngA [Escherichia coli B088] gi|301022369|ref|ZP_07186258.1| ribosome-associated GTPase EngA [Escherichia coli MS 196-1] gi|307139146|ref|ZP_07498502.1| GTP-binding protein EngA [Escherichia coli H736] gi|307312494|ref|ZP_07592127.1| ribosome-associated GTPase EngA [Escherichia coli W] gi|312973248|ref|ZP_07787420.1| small GTP-binding domain protein [Escherichia coli 1827-70] gi|331669257|ref|ZP_08370105.1| ribosome-associated GTPase EngA [Escherichia coli TA271] gi|68566316|sp|P0A6P5|DER_ECOLI RecName: Full=GTPase Der; AltName: Full=Double era-like domain protein; AltName: Full=GTP-binding protein EngA gi|68566317|sp|P0A6P6|DER_ECO57 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166920098|sp|A7ZPV4|DER_ECO24 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166920099|sp|A8A317|DER_ECOHS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189037147|sp|B1IWF0|DER_ECOLC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226741138|sp|B7M7L5|DER_ECO8A RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|229784133|sp|B1XAY6|DER_ECODH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238058973|sp|B5Z0Y0|DER_ECO5E RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238058974|sp|B6I583|DER_ECOSE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783153|sp|B7LCQ1|DER_ECO55 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|259645873|sp|C4ZX86|DER_ECOBW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|85675433|dbj|BAA16397.2| predicted GTP-binding protein [Escherichia coli str. K12 substr. W3110] gi|87082120|gb|AAC75564.2| GTPase; multicopy suppressor of ftsJ [Escherichia coli str. K-12 substr. MG1655] gi|157067666|gb|ABV06921.1| GTP-binding protein EngA [Escherichia coli HS] gi|157078758|gb|ABV18466.1| GTP-binding protein EngA [Escherichia coli E24377A] gi|169754134|gb|ACA76833.1| small GTP-binding protein [Escherichia coli ATCC 8739] gi|169889956|gb|ACB03663.1| predicted GTP-binding protein [Escherichia coli str. K-12 substr. DH10B] gi|187770576|gb|EDU34420.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4196] gi|188017037|gb|EDU55159.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4113] gi|188489820|gb|EDU64923.1| GTP-binding protein EngA [Escherichia coli 53638] gi|189003270|gb|EDU72256.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4076] gi|189356591|gb|EDU75010.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4401] gi|189362188|gb|EDU80607.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4486] gi|189368460|gb|EDU86876.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4501] gi|189372347|gb|EDU90763.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC869] gi|189378586|gb|EDU97002.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC508] gi|190902271|gb|EDV62011.1| ribosome-associated GTPase EngA [Escherichia coli B7A] gi|192929261|gb|EDV82870.1| ribosome-associated GTPase EngA [Escherichia coli E22] gi|194414623|gb|EDX30895.1| ribosome-associated GTPase EngA [Escherichia coli B171] gi|194423378|gb|EDX39369.1| ribosome-associated GTPase EngA [Escherichia coli 101-1] gi|208735615|gb|EDZ84302.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4045] gi|208741557|gb|EDZ89239.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4042] gi|209161078|gb|ACI38511.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. EC4115] gi|209913247|dbj|BAG78321.1| putative GTP-binding protein [Escherichia coli SE11] gi|217319280|gb|EEC27705.1| ribosome-associated GTPase EngA [Escherichia coli O157:H7 str. TW14588] gi|218352870|emb|CAU98669.1| GTPase involved in ribosome synthesis and maintenance [Escherichia coli 55989] gi|218361804|emb|CAQ99403.1| GTPase involved in ribosome synthesis and maintenance [Escherichia coli IAI1] gi|238862452|gb|ACR64450.1| predicted GTP-binding protein [Escherichia coli BW2952] gi|242378109|emb|CAQ32882.1| 50S ribosomal subunit stability factor [Escherichia coli BL21(DE3)] gi|253323639|gb|ACT28241.1| small GTP-binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974386|gb|ACT40057.1| GTP-binding protein EngA [Escherichia coli B str. REL606] gi|253978553|gb|ACT44223.1| GTP-binding protein EngA [Escherichia coli BL21(DE3)] gi|254593857|gb|ACT73218.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Escherichia coli O157:H7 str. TW14359] gi|257755254|dbj|BAI26756.1| predicted GTP-binding protein Der [Escherichia coli O26:H11 str. 11368] gi|257760288|dbj|BAI31785.1| predicted GTP-binding protein Der [Escherichia coli O103:H2 str. 12009] gi|257765556|dbj|BAI37051.1| predicted GTP-binding protein Der [Escherichia coli O111:H- str. 11128] gi|260448409|gb|ACX38831.1| small GTP-binding protein [Escherichia coli DH1] gi|290763605|gb|ADD57566.1| GTP-binding protein engA [Escherichia coli O55:H7 str. CB9615] gi|291323694|gb|EFE63122.1| ribosome-associated GTPase EngA [Escherichia coli B088] gi|291433424|gb|EFF06403.1| ribosome-associated GTPase EngA [Escherichia coli B185] gi|299881282|gb|EFI89493.1| ribosome-associated GTPase EngA [Escherichia coli MS 196-1] gi|306907417|gb|EFN37921.1| ribosome-associated GTPase EngA [Escherichia coli W] gi|309702843|emb|CBJ02174.1| GTP-binding protein [Escherichia coli ETEC H10407] gi|310331843|gb|EFP99078.1| small GTP-binding domain protein [Escherichia coli 1827-70] gi|315061830|gb|ADT76157.1| predicted GTP-binding protein [Escherichia coli W] gi|315137135|dbj|BAJ44294.1| GTP-binding protein engA [Escherichia coli DH1] gi|315615770|gb|EFU96402.1| small GTP-binding domain protein [Escherichia coli 3431] gi|320180501|gb|EFW55432.1| GTP-binding protein EngA [Shigella boydii ATCC 9905] gi|320188844|gb|EFW63503.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. EC1212] gi|320200075|gb|EFW74664.1| GTP-binding protein EngA [Escherichia coli EC4100B] gi|320640855|gb|EFX10343.1| GTP-binding protein Der [Escherichia coli O157:H7 str. G5101] gi|320646298|gb|EFX15225.1| GTP-binding protein Der [Escherichia coli O157:H- str. 493-89] gi|320651803|gb|EFX20183.1| GTP-binding protein Der [Escherichia coli O157:H- str. H 2687] gi|320657189|gb|EFX24998.1| GTP-binding protein Der [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662795|gb|EFX30127.1| GTP-binding protein Der [Escherichia coli O55:H7 str. USDA 5905] gi|320667599|gb|EFX34514.1| GTP-binding protein Der [Escherichia coli O157:H7 str. LSU-61] gi|323156165|gb|EFZ42324.1| small GTP-binding domain protein [Escherichia coli EPECa14] gi|323159381|gb|EFZ45366.1| small GTP-binding domain protein [Escherichia coli E128010] gi|323170218|gb|EFZ55871.1| small GTP-binding domain protein [Escherichia coli LT-68] gi|323177365|gb|EFZ62953.1| small GTP-binding domain protein [Escherichia coli 1180] gi|323184428|gb|EFZ69803.1| small GTP-binding domain protein [Escherichia coli 1357] gi|323377589|gb|ADX49857.1| ribosome-associated GTPase EngA [Escherichia coli KO11] gi|323936404|gb|EGB32694.1| ribosome-associated GTPase EngA [Escherichia coli E1520] gi|323941227|gb|EGB37412.1| ribosome GTPase EngA [Escherichia coli E482] gi|323944733|gb|EGB40800.1| ribosome-associated GTPase EngA [Escherichia coli H120] gi|323971076|gb|EGB66324.1| ribosome GTPase EngA [Escherichia coli TA007] gi|324118145|gb|EGC12042.1| ribosome GTPase EngA [Escherichia coli E1167] gi|326340309|gb|EGD64113.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1125] gi|326344993|gb|EGD68737.1| GTP-binding protein EngA [Escherichia coli O157:H7 str. 1044] gi|331064451|gb|EGI36362.1| ribosome-associated GTPase EngA [Escherichia coli TA271] gi|332344383|gb|AEE57717.1| conserved hypothetical protein [Escherichia coli UMNK88] gi|333000699|gb|EGK20275.1| small GTP-binding domain protein [Shigella flexneri VA-6] Length = 490 Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|325294541|ref|YP_004281055.1| GTP-binding protein engA [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064989|gb|ADY72996.1| GTP-binding protein engA [Desulfurobacterium thermolithotrophum DSM 11699] Length = 478 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 21/182 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P I+ GR NVGKSSL N L+ K +A + PG T+ D + K L Sbjct: 4 LPVISIVGRPNVGKSSLFNRLL-EKKVAIIDDTPGVTRDRIV-QEADIDDHKVILVDTGG 61 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G G+A+ + + ++D + G+ +D++V L K Sbjct: 62 VDTSGEGFAKETTEQAK----------RAMEEADIIVFVVDGKEGITPLDEEVAKILRKW 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + KID + +E + Y PEVIP S++ + GI L++ ILE Sbjct: 112 KKPIIVAVNKID-------EPYMEDL--IYDAYRLGFPEVIPISTIHKIGIPTLKERILE 162 Query: 209 TI 210 + Sbjct: 163 LL 164 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 11/183 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR N+GKS+L+N LV + A S+ PG T+ + K Sbjct: 217 EKEPIKVAIVGRPNMGKSTLLNALVGEER-AIVSDIPGTTRDAI------DTYAKIGDDE 269 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K ++ + L R L V LL+D G D + Sbjct: 270 FIFIDTAGIRRRGKIKD-IEYYSYL--RALDAIDRADVVVLLVDAEEGPTDRDTKISGIA 326 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 K I + KIDKL E L + L ++ P V S+ ++KG+E L K Sbjct: 327 LDKFKPIIIAVNKIDKLQNQKEWERLHRELDLNFDFIPYAPRVF-ISAKEKKGLEELIKQ 385 Query: 206 ILE 208 I + Sbjct: 386 IKD 388 >gi|323977306|gb|EGB72392.1| ribosome GTPase EngA [Escherichia coli TW10509] Length = 490 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|227887546|ref|ZP_04005351.1| GTP-binding protein [Escherichia coli 83972] gi|300981973|ref|ZP_07175819.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1] gi|300998067|ref|ZP_07181927.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1] gi|301047143|ref|ZP_07194239.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1] gi|227835896|gb|EEJ46362.1| GTP-binding protein [Escherichia coli 83972] gi|300300945|gb|EFJ57330.1| ribosome-associated GTPase EngA [Escherichia coli MS 185-1] gi|300304046|gb|EFJ58566.1| ribosome-associated GTPase EngA [Escherichia coli MS 200-1] gi|300408868|gb|EFJ92406.1| ribosome-associated GTPase EngA [Escherichia coli MS 45-1] gi|315292449|gb|EFU51801.1| ribosome-associated GTPase EngA [Escherichia coli MS 153-1] gi|324011217|gb|EGB80436.1| ribosome-associated GTPase EngA [Escherichia coli MS 60-1] Length = 499 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|170681267|ref|YP_001744699.1| GTP-binding protein EngA [Escherichia coli SMS-3-5] gi|218706014|ref|YP_002413533.1| GTP-binding protein EngA [Escherichia coli UMN026] gi|293405952|ref|ZP_06649944.1| GTP-binding protein engA [Escherichia coli FVEC1412] gi|298381753|ref|ZP_06991352.1| GTP-binding protein engA [Escherichia coli FVEC1302] gi|331664074|ref|ZP_08364984.1| ribosome-associated GTPase EngA [Escherichia coli TA143] gi|226741139|sp|B7N699|DER_ECOLU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226741140|sp|B1LNG6|DER_ECOSM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|170518985|gb|ACB17163.1| GTP-binding protein EngA [Escherichia coli SMS-3-5] gi|218433111|emb|CAR14008.1| GTPase involved in ribosome synthesis and maintenance [Escherichia coli UMN026] gi|284922461|emb|CBG35548.1| GTP-binding protein [Escherichia coli 042] gi|291428160|gb|EFF01187.1| GTP-binding protein engA [Escherichia coli FVEC1412] gi|298279195|gb|EFI20709.1| GTP-binding protein engA [Escherichia coli FVEC1302] gi|323961327|gb|EGB56939.1| ribosome GTPase EngA [Escherichia coli H489] gi|331059873|gb|EGI31850.1| ribosome-associated GTPase EngA [Escherichia coli TA143] Length = 490 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|162138394|ref|YP_541823.2| GTP-binding protein EngA [Escherichia coli UTI89] gi|218559437|ref|YP_002392350.1| GTP-binding protein EngA [Escherichia coli S88] gi|218690631|ref|YP_002398843.1| GTP-binding protein EngA [Escherichia coli ED1a] gi|306814419|ref|ZP_07448581.1| GTP-binding protein EngA [Escherichia coli NC101] gi|226741136|sp|B7MHZ6|DER_ECO45 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783154|sp|B7MYE6|DER_ECO81 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218366206|emb|CAR03954.1| GTPase involved in ribosome synthesis and maintenance [Escherichia coli S88] gi|218428195|emb|CAR09112.2| GTPase involved in ribosome synthesis and maintenance [Escherichia coli ED1a] gi|222034222|emb|CAP76963.1| GTP-binding protein engA [Escherichia coli LF82] gi|294491525|gb|ADE90281.1| ribosome-associated GTPase EngA [Escherichia coli IHE3034] gi|305851813|gb|EFM52265.1| GTP-binding protein EngA [Escherichia coli NC101] gi|307625933|gb|ADN70237.1| GTP-binding protein EngA [Escherichia coli UM146] gi|312947088|gb|ADR27915.1| GTP-binding protein EngA [Escherichia coli O83:H1 str. NRG 857C] gi|323949171|gb|EGB45062.1| ribosome GTPase EngA [Escherichia coli H252] gi|323955752|gb|EGB51510.1| ribosome GTPase EngA [Escherichia coli H263] Length = 490 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|194432132|ref|ZP_03064421.1| ribosome-associated GTPase EngA [Shigella dysenteriae 1012] gi|194419661|gb|EDX35741.1| ribosome-associated GTPase EngA [Shigella dysenteriae 1012] gi|332089695|gb|EGI94796.1| small GTP-binding domain protein [Shigella dysenteriae 155-74] Length = 490 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|193068430|ref|ZP_03049393.1| ribosome-associated GTPase EngA [Escherichia coli E110019] gi|192958382|gb|EDV88822.1| ribosome-associated GTPase EngA [Escherichia coli E110019] Length = 490 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|325496456|gb|EGC94315.1| putative GTP-binding factor [Escherichia fergusonii ECD227] Length = 499 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|300820819|ref|ZP_07100969.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7] gi|300927126|ref|ZP_07142874.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1] gi|300930151|ref|ZP_07145572.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1] gi|300951784|ref|ZP_07165599.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1] gi|300958859|ref|ZP_07170967.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1] gi|301302868|ref|ZP_07208996.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1] gi|301330398|ref|ZP_07223040.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1] gi|301648266|ref|ZP_07248009.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1] gi|309794442|ref|ZP_07688865.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7] gi|300314511|gb|EFJ64295.1| ribosome-associated GTPase EngA [Escherichia coli MS 175-1] gi|300416896|gb|EFK00207.1| ribosome-associated GTPase EngA [Escherichia coli MS 182-1] gi|300448981|gb|EFK12601.1| ribosome-associated GTPase EngA [Escherichia coli MS 116-1] gi|300461957|gb|EFK25450.1| ribosome-associated GTPase EngA [Escherichia coli MS 187-1] gi|300526572|gb|EFK47641.1| ribosome-associated GTPase EngA [Escherichia coli MS 119-7] gi|300841803|gb|EFK69563.1| ribosome-associated GTPase EngA [Escherichia coli MS 124-1] gi|300843627|gb|EFK71387.1| ribosome-associated GTPase EngA [Escherichia coli MS 78-1] gi|301073653|gb|EFK88459.1| ribosome-associated GTPase EngA [Escherichia coli MS 146-1] gi|308121898|gb|EFO59160.1| ribosome-associated GTPase EngA [Escherichia coli MS 145-7] gi|315256531|gb|EFU36499.1| ribosome-associated GTPase EngA [Escherichia coli MS 85-1] gi|324020071|gb|EGB89290.1| ribosome-associated GTPase EngA [Escherichia coli MS 117-3] Length = 499 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|293410925|ref|ZP_06654501.1| ribosome-associated GTPase EngA [Escherichia coli B354] gi|291471393|gb|EFF13877.1| ribosome-associated GTPase EngA [Escherichia coli B354] Length = 499 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGIDGTENGVETR-----MAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|30063903|ref|NP_838074.1| GTP-binding protein EngA [Shigella flexneri 2a str. 2457T] gi|110806442|ref|YP_689962.1| GTP-binding protein EngA [Shigella flexneri 5 str. 8401] gi|123146827|sp|Q0T208|DER_SHIF8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|30042158|gb|AAP17884.1| putative GTP-binding factor [Shigella flexneri 2a str. 2457T] gi|110615990|gb|ABF04657.1| putative GTP-binding factor [Shigella flexneri 5 str. 8401] gi|281601913|gb|ADA74897.1| GTP-binding protein engA [Shigella flexneri 2002017] gi|313650997|gb|EFS15397.1| small GTP-binding domain protein [Shigella flexneri 2a str. 2457T] gi|332754198|gb|EGJ84566.1| small GTP-binding domain protein [Shigella flexneri 4343-70] gi|332755561|gb|EGJ85925.1| small GTP-binding domain protein [Shigella flexneri K-671] gi|332756305|gb|EGJ86656.1| small GTP-binding domain protein [Shigella flexneri 2747-71] gi|332766344|gb|EGJ96554.1| small GTP-binding domain protein [Shigella flexneri 2930-71] gi|333001904|gb|EGK21470.1| small GTP-binding domain protein [Shigella flexneri K-218] gi|333016427|gb|EGK35758.1| small GTP-binding domain protein [Shigella flexneri K-304] Length = 490 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVVNKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|315288063|gb|EFU47463.1| ribosome-associated GTPase EngA [Escherichia coli MS 110-3] gi|324008519|gb|EGB77738.1| ribosome-associated GTPase EngA [Escherichia coli MS 57-2] Length = 499 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARSGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|300898385|ref|ZP_07116728.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1] gi|300940238|ref|ZP_07154836.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1] gi|300357925|gb|EFJ73795.1| ribosome-associated GTPase EngA [Escherichia coli MS 198-1] gi|300454934|gb|EFK18427.1| ribosome-associated GTPase EngA [Escherichia coli MS 21-1] Length = 499 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|187731692|ref|YP_001881302.1| GTP-binding protein EngA [Shigella boydii CDC 3083-94] gi|238691721|sp|B2TXT6|DER_SHIB3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|187428684|gb|ACD07958.1| ribosome-associated GTPase EngA [Shigella boydii CDC 3083-94] Length = 490 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V KID L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKIDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|312173198|emb|CBX81453.1| GTP-binding protein engA [Erwinia amylovora ATCC BAA-2158] Length = 499 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 E P P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 200 AEDDFNPLDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------P 252 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G + V+ + +++ L V L+ID G+ D Sbjct: 253 MERDGREYILIDTAGVRKRGKVTETVEKFS--VIKTLKAIEDANVVMLVIDAHEGISDQD 310 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D LS E E Y + + S++ G Sbjct: 311 LSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKEALDYRLG--FIDFARIHFISALHGSG 368 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 369 VGNLFESVTEAYD 381 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L V ++D R G+ D + L + Sbjct: 55 IDTGGIDGNEEGVETR-----MAEQSLLAIEEADVVLFMVDARAGLMPADTAIAKHLRAR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 IV K D L +A ++ + E+ P ++ +G+ L + +L Sbjct: 110 QKPTFIVANKTDGLDADSA---------VVDFWSLGLGEIHPIAASHGRGVTSLLELVL 159 >gi|292489043|ref|YP_003531930.1| GTP-binding protein engA [Erwinia amylovora CFBP1430] gi|292900172|ref|YP_003539541.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291200020|emb|CBJ47145.1| GTP-binding protein [Erwinia amylovora ATCC 49946] gi|291554477|emb|CBA22001.1| GTP-binding protein engA [Erwinia amylovora CFBP1430] Length = 499 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 75/193 (38%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 E P P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 200 AEDDFNPLDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------P 252 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G + V+ + +++ L V L+ID G+ D Sbjct: 253 MERDGREYILIDTAGVRKRGKVTETVEKFS--VIKTLKAIEDANVVMLVIDAHEGISDQD 310 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S IV+ K D LS E E Y + + S++ G Sbjct: 311 LSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKEALDYRLG--FIDFARIHFISALHGSG 368 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 369 VGNLFESVTEAYD 381 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L V ++D R G+ D + L + Sbjct: 55 IDTGGIDGNEEGVETR-----MAEQSLLAIEEADVVLFMVDARAGLMPADTAIAKHLRAR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 IV K D L +A ++ + E+ P ++ +G+ L + +L Sbjct: 110 QKPTFIVANKTDGLDADSA---------VVDFWSLGLGEIHPIAASHGRGVTSLLELVL 159 >gi|301024743|ref|ZP_07188383.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1] gi|300396412|gb|EFJ79950.1| ribosome-associated GTPase EngA [Escherichia coli MS 69-1] Length = 499 Score = 127 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQDVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|271501567|ref|YP_003334593.1| ribosome-associated GTPase EngA [Dickeya dadantii Ech586] gi|270345122|gb|ACZ77887.1| ribosome-associated GTPase EngA [Dickeya dadantii Ech586] Length = 498 Score = 127 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 74/192 (38%), Gaps = 15/192 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P LP ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 203 APNFEGLP----IKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------ 251 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 252 PMERDGRDYVLIDTAGVRKRGKITDTVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 309 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ S IV+ K D L+ + E +R + S++ Sbjct: 310 DLSLLGFILNSGRSLVIVVNKWDGLTQEVKDQVKETLD--LRLGFIDFARIHFISALHGS 367 Query: 198 GIEVLRKAILET 209 G+ L +++ E Sbjct: 368 GVGNLFESVNEA 379 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGNEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V L+D R G+ D + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADIVLFLVDARDGLMPADYAIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K+D + T + Y +V P ++ +G+ L + +L Sbjct: 110 EKDTFLVANKVDGIDIDT---------GIADFYSLGLGDVYPIAASHGRGVTSLLEKVL 159 >gi|291618407|ref|YP_003521149.1| EngA [Pantoea ananatis LMG 20103] gi|291153437|gb|ADD78021.1| EngA [Pantoea ananatis LMG 20103] gi|327394799|dbj|BAK12221.1| GTP-binding protein EngA [Pantoea ananatis AJ13355] Length = 494 Score = 127 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P P ++A GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 198 DFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMER 250 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 251 DGREYVLIDTAGVRKRGKITDTVEKFS--VIKTLQAIEDANVVMLVIDARAGISDQDLSL 308 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS E E + + V S++ G+ Sbjct: 309 LGFILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLG--FIDFARVHFISALHGSGVGN 366 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 367 LFESVTEAYD 376 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V K D L P A ++ Y E+ ++ +G+ L + Sbjct: 110 QKATFLVANKTDGLDPDQA---------VVDFYSLGLGEIHAIAASHGRGVTSLLET 157 >gi|157144555|ref|YP_001451874.1| GTP-binding protein EngA [Citrobacter koseri ATCC BAA-895] gi|166224326|sp|A8AD75|DER_CITK8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157081760|gb|ABV11438.1| hypothetical protein CKO_00275 [Citrobacter koseri ATCC BAA-895] Length = 490 Score = 127 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 76/190 (40%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 195 DFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DEREYVLIDTAGVRKRGKVTDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D L+ ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLTQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIHPIAASHGRGVLSLLEHVL 159 >gi|291085040|ref|ZP_06570912.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220] gi|291071734|gb|EFE09843.1| ribosome-associated GTPase EngA [Citrobacter youngae ATCC 29220] Length = 504 Score = 127 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P+ P ++A GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 209 DFNPQDLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMER 261 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G + V+ + +++ L V L+ID R G+ D + Sbjct: 262 DGREYVLIDTAGVRKRGKITEAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 319 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D L+ ++ E + + V S++ G+ Sbjct: 320 LGFILNSGRSLVIVVNKWDGLTQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 377 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 378 LFESVREAYD 387 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 16 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 68 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 69 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRAR 123 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A +I Y E+ P ++ +G+ L + +L Sbjct: 124 QKPTFLVANKTDGLDPDQA---------VIDFYSLGLGEIHPIAASHGRGVLSLLEHVL 173 >gi|315300482|gb|EFU59711.1| ribosome-associated GTPase EngA [Escherichia coli MS 16-3] Length = 499 Score = 127 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRESIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYALGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|145579207|pdb|2DYK|A Chain A, Crystal Structure Of N-Terminal Gtp-Binding Domain Of Enga From Thermus Thermophilus Hb8 gi|145579208|pdb|2DYK|B Chain B, Crystal Structure Of N-Terminal Gtp-Binding Domain Of Enga From Thermus Thermophilus Hb8 Length = 161 Score = 127 bits (321), Expect = 7e-28, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 22/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL N L+ +K A ++ PG T+ L V + + LVD Sbjct: 3 KVVIVGRPNVGKSSLFNRLL-KKRSAVVADVPGVTRDLKEGVV------ETDRGRFLLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +K + + R L + V +D R + Q D +V +L +K Sbjct: 56 TGGLWSGDKWEKKI---QEKVDRALEDAE---VVLFAVDGRAELTQADYEVAEYLRRKGK 109 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V TK+D + L YL Y + IPTSS +G+E L +AI E + Sbjct: 110 PVILVATKVD-----DPKHEL----YLGPLYGLGFGDPIPTSSEHARGLEELLEAIWERL 160 >gi|32186993|gb|AAP73740.1| EngA [Escherichia coli] Length = 369 Score = 127 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 74 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 126 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 127 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 184 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 185 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 242 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 243 LFESVREAYD 252 >gi|320539280|ref|ZP_08038950.1| ribosome-associated GTPase [Serratia symbiotica str. Tucson] gi|320030672|gb|EFW12681.1| ribosome-associated GTPase [Serratia symbiotica str. Tucson] Length = 495 Score = 127 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ ++A GR NVGKS+L N ++ + + + PG T+ + + + Sbjct: 203 PQDLAIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMVRDER 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 256 EYVLIDTAGVRKHGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDRDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D +S E +R V S++ G+ L + Sbjct: 314 ILNSGRSLVIVVNKWDGMSEEERTHVKEMLD--LRLGFVDFARVHFISALHGSGVGNLFE 371 Query: 205 AILET 209 ++LE Sbjct: 372 SVLEA 376 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 21/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A ++ PG T+ + + +VD Sbjct: 5 VALVGRPNVGKSTLFNRLTQTRD-ALVADFPGLTRDRKY------GRAEVEGNEFIIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + L+ V ++D R G+ DQ + L + + Sbjct: 58 GGIDGHEDGVETRMAGQSLL-----AIEEADIVLFMVDARAGLMPADQGIAQHLRNRQKA 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K D L P Y EV ++ +G+ L + +L Sbjct: 113 TFLVVNKTDGLDPDVVTA---------DFYSLGLGEVYAIAASHGRGVRQLIEHVL 159 >gi|170767411|ref|ZP_02901864.1| GTP-binding protein EngA [Escherichia albertii TW07627] gi|170123745|gb|EDS92676.1| GTP-binding protein EngA [Escherichia albertii TW07627] Length = 499 Score = 127 bits (320), Expect = 8e-28, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEEGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLERVL 168 >gi|298492105|ref|YP_003722282.1| ribosome-associated GTPase EngA ['Nostoc azollae' 0708] gi|298234023|gb|ADI65159.1| ribosome-associated GTPase EngA ['Nostoc azollae' 0708] Length = 454 Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 13/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + VP + P+ ++A GR NVGKSSL+N V + A S G T+ Sbjct: 162 ITHVPNVKDSPEDNVIKVAIIGRPNVGKSSLLNAFVGEER-AIVSPISGTTRDTI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + N L+D G + + + + I R V L++D G Sbjct: 216 -DTEIVRNGQTYRLIDTAGIRKKKHIEYGTEFFS--INRAFKAIRRADVVLLVLDAEDGA 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + DQ + + ++ + IV+ K D + + + R + T ++I S+V Sbjct: 273 TEQDQKLAGRITEEGRACIIVVNKWDAVEKDSYTIYDYEKGLEARLHFTEWADIIFVSAV 332 Query: 195 KRKGIEVLRKAILETIN 211 + +E ILE +N Sbjct: 333 TGQRVEK----ILELVN 345 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A + PG T+ + + + Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQT-AIVHDEPGVTRD------RTYRPAFWGNREFVV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L S ++D + G DQ++ +L ++ Sbjct: 56 VDTGGLVFNDDTEFLPLIRQQA----LMALSEACAAIFVVDGQRGPMPADQEIADWLHQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + Q + + E P S++ G + ++ Sbjct: 112 PVPILLAVNKCESPDQGLIQAS--------GFWELGLGEPYPISAIHGSGTGEILDELIT 163 Query: 209 TI 210 + Sbjct: 164 HV 165 >gi|220932765|ref|YP_002509673.1| small GTP-binding protein [Halothermothrix orenii H 168] gi|219994075|gb|ACL70678.1| small GTP-binding protein [Halothermothrix orenii H 168] Length = 411 Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 19/190 (10%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + P+A P IA GR NVGKS+LIN L N++ LA S+ PG T + + Sbjct: 1 MQQTPRANRPHIAVFGRRNVGKSTLINTLTNQE-LALVSDVPGTTTDPVYKSMELLPLGP 59 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + A +D G KK + L+ID HG ++D Sbjct: 60 VVMIDTAGIDDVGSLGKLRIKKTREVIRRT-----------DLAILVIDPFHGAGNYEKD 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 +++ L + +V+ KID++ Q+ L+K K L P I S+ GIE Sbjct: 109 LYNKLQDNNIPVVVVINKIDRVK-GIKQDLLDKVKLLFGVTP------IKVSAHSGTGIE 161 Query: 201 VLRKAILETI 210 LR+ ++ + Sbjct: 162 ELREVLVNRV 171 >gi|317049132|ref|YP_004116780.1| ribosome-associated GTPase EngA [Pantoea sp. At-9b] gi|316950749|gb|ADU70224.1| ribosome-associated GTPase EngA [Pantoea sp. At-9b] Length = 496 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P P ++A GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 200 DFDPTTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMER 252 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 253 DDREYILIDTAGVRKRGKITDTVEKFS--VIKTLQAIEDANVVMLVIDARAGISDQDLSL 310 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS E E + + V S++ G+ Sbjct: 311 LGFILNSGRSLVIVVNKWDGLSQEVKDEVKETLDFRLG--FIDFARVHFISALHGSGVGN 368 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 369 LFESVTEAYD 378 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 69/177 (38%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V+ + + L V L+D R GV DQ + + L + Sbjct: 55 IDTGGI---DGTEEGVE--NRMAEQSLLAIEEADVVLFLVDARAGVMPADQQIANHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V K D L P A ++ Y E+ ++ +G+ L + Sbjct: 110 QKATFLVANKTDGLDPEAA---------VLDFYALGLGEIHAIAASHGRGVTSLLET 157 >gi|73856514|gb|AAZ89221.1| putative GTP-binding factor [Shigella sonnei Ss046] Length = 503 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 208 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 260 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 261 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDTNVVMLVIDAREGISDQDLSL 318 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 319 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 376 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 377 LFESVREAYD 386 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 15 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 67 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 68 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 122 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 123 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLERVL 172 >gi|289192567|ref|YP_003458508.1| GTP-binding protein HSR1-related protein [Methanocaldococcus sp. FS406-22] gi|288939017|gb|ADC69772.1| GTP-binding protein HSR1-related protein [Methanocaldococcus sp. FS406-22] Length = 215 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 26/194 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GRSNVGKS+ + ++ RK++ + PG T +N + ++ LVDM Sbjct: 23 VIVVGRSNVGKSTFVRLMTGRKDV-KVGKKPGVTLKINEY----------DMGEYILVDM 71 Query: 92 PGYGY-ARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-----------HGVKQID 138 PG+GY A PKK + IV Y+ + + +ID + G ID Sbjct: 72 PGFGYMAGLPKKVQEKIKDEIVHYIENHADEIAAAVQIIDTKSFFEIVERWKGKGEIPID 131 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--PEVIPTSSVKR 196 ++F F+ +S +V K+DK+ E L+ ++ P H ++P + Sbjct: 132 LEMFDFITDLKISPILVANKMDKIKKDEWDEVLDGICEYLKCQPPWHQWKFIVPAILKEG 191 Query: 197 KGIEVLRKAILETI 210 KGIE ++K ILE + Sbjct: 192 KGIEEIKKKILERV 205 >gi|161986480|ref|YP_311456.2| GTP-binding protein EngA [Shigella sonnei Ss046] gi|323169045|gb|EFZ54722.1| small GTP-binding domain protein [Shigella sonnei 53G] Length = 490 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDTNVVMLVIDAREGISDQDLSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLERVL 159 >gi|320451137|ref|YP_004203233.1| ribosome-associated GTPase EngA [Thermus scotoductus SA-01] gi|320151306|gb|ADW22684.1| ribosome-associated GTPase EngA [Thermus scotoductus SA-01] Length = 432 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 75/181 (41%), Gaps = 24/181 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL N L+ +++ A ++ PG T+ L V ++ LVD Sbjct: 3 KVVIVGRPNVGKSSLFNRLLGKRS-AVVADVPGVTRDLKEGVV------ESEKGRFLLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G D W I + V +D R + Q D +V +L KK Sbjct: 56 TGGLWSG-------DRWEKKIQEKVDQALEDAEVVLFAVDGRSELTQADYEVAEYLRKKG 108 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V TK+D E YL Y + IPTSS +G+E L +AI E Sbjct: 109 RPVILVATKVD----DPKHEH-----YLGPLYALGFGDPIPTSSEHARGLEELLEAIWEK 159 Query: 210 I 210 + Sbjct: 160 L 160 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 18/185 (9%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 I P+ ++A GR N GKSSL+N ++ + + S PG T+ + Sbjct: 164 HIESEPEVAGIKLAIVGRPNAGKSSLLNAILGEERV-IVSEEPGTTRDAI------DVHF 216 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 LVD G + P+ V+ I R L V L++D + D+ Sbjct: 217 TFRGQPFVLVDTAGIR--KRPESLVEELA--IRRSLKAIEEADVVLLVVD---PFQVGDR 269 Query: 140 D--VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + + + + +V+TK D + A + + K + + H + TS+ ++ Sbjct: 270 ELKLANHALEAGKPVLLVITKWDLVRKEEAPKVRRELKEKLAHL--EHLPRVYTSAFTKQ 327 Query: 198 GIEVL 202 ++ + Sbjct: 328 NLDKI 332 >gi|183599734|ref|ZP_02961227.1| hypothetical protein PROSTU_03237 [Providencia stuartii ATCC 25827] gi|188021993|gb|EDU60033.1| hypothetical protein PROSTU_03237 [Providencia stuartii ATCC 25827] Length = 490 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 75/185 (40%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 199 PTTLPIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRDSIYI------PMERDGR 251 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 252 EYVLIDTAGVRKRGKITETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 309 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D + P + + + +R + S++ G+ L + Sbjct: 310 ILNAGRSLVIAVNKWDGMKPEDREHVKDMLE--LRLGFVDFARIHFISALHGSGVGNLFE 367 Query: 205 AILET 209 ++ E Sbjct: 368 SVEEA 372 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVETH--MAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V K D + + + Y E+ P ++ +G+ L Sbjct: 110 KKKTYLVANKTDGIDADSV---------IGDFYSLGLGEIHPIAASHGRGVTQL 154 >gi|308187766|ref|YP_003931897.1| GTP-binding protein engA [Pantoea vagans C9-1] gi|308058276|gb|ADO10448.1| GTP-binding protein engA [Pantoea vagans C9-1] Length = 496 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 203 PTGLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDGR 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID G+ D + F Sbjct: 256 EYVLIDTAGVRKRAKISDTVEKFS--VIKTLQAIEDANVVMLVIDAHAGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D LS E E + + + S++ G+ L + Sbjct: 314 ILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLG--FIDFARIHFISALHGSGVGNLFE 371 Query: 205 AILETIN 211 +I E + Sbjct: 372 SITEAYD 378 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 24/182 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEEGVET--RMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V K D L P A ++ Y E+ ++ +G+ L I E Sbjct: 110 QKATFLVANKTDGLDPDQA---------VVDFYSLGLGEIHAIAASHGRGVSSL---IEE 157 Query: 209 TI 210 + Sbjct: 158 AL 159 >gi|209763424|gb|ACI80024.1| putative GTP-binding factor [Escherichia coli] Length = 503 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 15/192 (7%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 208 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 260 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D + Sbjct: 261 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSL 318 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVKRKGI 199 F+ S IV+ K D L QE E+ K + R V S++ G+ Sbjct: 319 LGFILNSGRSLVIVVNKWDGL----RQEVKEQVKETLDFRLGFIDFARVHFISALHGSGV 374 Query: 200 EVLRKAILETIN 211 L +++ E + Sbjct: 375 GNLFESVREAYD 386 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 15 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 67 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 68 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 122 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 123 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 172 >gi|114588506|ref|XP_001156766.1| PREDICTED: GTP-binding protein 8 isoform 1 [Pan troglodytes] Length = 251 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 49/209 (23%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 + IFT ++ ++ I P PE Sbjct: 81 ADNIFTATERNRIDYVSSAVRIDHAPDLPRPE---------------------------- 112 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 G T+ +NFF +VDMPGYG+ RAP+ VD ++ YL ER Sbjct: 113 ---GHTKKMNFFKVGKH---------FTVVDMPGYGF-RAPEDFVD----MVETYLKERR 155 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLI 178 L+ +LL+D G+++ D ++ A+ Y IVLTKIDK S ++ L+ K++ Sbjct: 156 NLKRTFLLVDSVVGIQKTDNTAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVN 215 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 P++ P S+V GI +LR I Sbjct: 216 MKTQGCFPQLFPVSAVTFSGIHLLRCFIA 244 >gi|32490912|ref|NP_871166.1| hypothetical protein WGLp163 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340065|sp|Q8D338|ENGB_WIGBR RecName: Full=Probable GTP-binding protein EngB gi|25166118|dbj|BAC24309.1| yihA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 203 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 13/189 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL + LPK EIAF GRSN GKS IN L ++K ++ +S PGRT +N F+ Sbjct: 6 FLLSANNLFNLPKDNGLEIAFFGRSNSGKSKAINALFDKKKISISSKKPGRTNFINVFIM 65 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + ++D+PG+GY++ KK L+ Y R +L+ + +L D R Sbjct: 66 N---------KKLRIIDLPGFGYSKISKKKSKI-KYLLDDYFKSRKSLKILIILEDIRRS 115 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN---YPTAHPEVIP 190 V + ++ + + I+L+K DK++ ++ L K I + EV+ Sbjct: 116 VSEFNEKLIYLSFNLKIPVLILLSKSDKINFEKRKKKLSLFKKYIEKTTHTKNIYIEVLT 175 Query: 191 TSSVKRKGI 199 SS+ R GI Sbjct: 176 FSSISRDGI 184 >gi|304398581|ref|ZP_07380453.1| ribosome-associated GTPase EngA [Pantoea sp. aB] gi|304353792|gb|EFM18167.1| ribosome-associated GTPase EngA [Pantoea sp. aB] Length = 496 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 203 PTGLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDGR 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID G+ D + F Sbjct: 256 EYVLIDTAGVRKRAKISDTVEKFS--VIKTLQAIEDANVVMLVIDAHAGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D LS E E + + + S++ G+ L + Sbjct: 314 ILNSGRSLVIVVNKWDGLSQEVRDEVKETLDFRLG--FIDFARIHFISALHGSGVGNLFE 371 Query: 205 AILETIN 211 +I E + Sbjct: 372 SITEAYD 378 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 24/182 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEEGVET--RMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V K D + P A ++ Y E+ ++ +G+ L I E Sbjct: 110 QKATFLVANKTDGMDPDQA---------IVDFYSLGLGEIHAIAASHGRGVSSL---IEE 157 Query: 209 TI 210 + Sbjct: 158 AL 159 >gi|300724175|ref|YP_003713492.1| GTP-binding protein [Xenorhabdus nematophila ATCC 19061] gi|297630709|emb|CBJ91374.1| GTP-binding protein, essential for cell growth [Xenorhabdus nematophila ATCC 19061] Length = 496 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 11/191 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 199 PEEEFDPTTLPLKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRDSIYI------P 251 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 252 MERDGREYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQD 309 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S I + K D +S + +R V S++ G Sbjct: 310 LSLLGFILNSGRSLVIAVNKWDGMSQEDKDHVKDMLD--LRLGFVDFARVHFISALHGSG 367 Query: 199 IEVLRKAILET 209 + L ++I E Sbjct: 368 VGNLFESIQEA 378 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGQEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEEGVETH--MAAQSLMAIEEADIVLFMVDARSGLMPADHAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D ++ + Y ++ ++ +G+ L + +L Sbjct: 110 EKATFLVANKTD---------GIDIETSVAEFYSLGLGDIYSIAASHGRGVTQLIERVL 159 >gi|51892817|ref|YP_075508.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] gi|81826113|sp|Q67NS9|DER_SYMTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|51856506|dbj|BAD40664.1| GTP-binding protein [Symbiobacterium thermophilum IAM 14863] Length = 471 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 10/186 (5%) Query: 25 PKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P+ G P +A GR NVGKSSL+N ++ + + S+ PG T+ ++ Sbjct: 172 PEEGGPVRVAVIGRPNVGKSSLVNAILGEERV-IVSDVPGTTRDAI------DVLVERGE 224 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G ++ V+ + + R L + V ++ID + GV + DQ + Sbjct: 225 DKFLLIDTAGMRRKARVEEAVERYSVM--RALRAVERAQVVLIVIDAQDGVTEQDQRIAG 282 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + + +V+ K D + + +R + + S+ R + L Sbjct: 283 YAHENGKACIVVVNKWDLIEKDDRTMAKMTEEVRMRLAFMDYAMIHFVSAKTRARVHRLL 342 Query: 204 KAILET 209 I E Sbjct: 343 PLIKEA 348 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 73/186 (39%), Gaps = 29/186 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + A + PG T+ + ++ + N + LV Sbjct: 3 PIVAIVGRPNVGKSTLFNRLT-QSRHAIVEDQPGVTRDRLY------ADTEWNGRTLTLV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSF 144 D G +D G I +++ ++ L + ++D GV D +V Sbjct: 56 DTGGI--------QLDKEGDTIEAHVTRQAELAIREADVIIFVVDVTDGVTAPDLEVADL 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L ++ + + K+ E L++ + + +I S+ G L Sbjct: 108 LRRQRKPVIVAVNKV---------ENLKREDEALEFWALGLEPLINVSAEHGLGTGDLLD 158 Query: 205 AILETI 210 A++ + Sbjct: 159 AVVAAL 164 >gi|56549687|ref|NP_612494.1| GTP-binding protein 8 isoform 2 [Homo sapiens] Length = 251 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 49/209 (23%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 + IFT ++ ++ I P PE Sbjct: 81 ADNIFTATERNRIDYVSSAVRIDHAPDLPRPE---------------------------- 112 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 G T+ +NFF +VDMPGYG+ RAP+ VD ++ YL ER Sbjct: 113 ---GHTKKMNFFKVGKH---------FTVVDMPGYGF-RAPEDFVD----MVETYLKERR 155 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLI 178 L+ +LL+D G+++ D ++ A+ Y IVLTKIDK S ++ L+ K++ Sbjct: 156 NLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVN 215 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 P++ P S+V GI +LR I Sbjct: 216 MKTQGCFPQLFPVSAVTFSGIHLLRCFIA 244 >gi|116626742|ref|YP_828898.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076] gi|116229904|gb|ABJ88613.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076] Length = 304 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR N GKS+L+N LV +K +A ++ P T+ V L + D Sbjct: 10 VSLIGRPNAGKSTLLNALVGQK-VAIVADKPQTTRTSIQGV------LTLPEAQIVFADT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A P + L ER + + D + D+ + Sbjct: 63 PGIHKADTPLNKR--LMDTVRGALEER---DLLLFVADATRKFNEDDRRAIDIARRHKTP 117 Query: 152 YQIVLTKIDKLSPTT-AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID L +E+ K + E +P SSVK+ G++ LR IL+ + Sbjct: 118 VVLVLNKIDLLKDKAHLLPLIEEYKAVFE-----FTEYVPVSSVKKIGLDQLRAVILKYL 172 >gi|55981360|ref|YP_144657.1| GTP-binding protein EngA [Thermus thermophilus HB8] gi|55772773|dbj|BAD71214.1| GTP-binding protein [Thermus thermophilus HB8] Length = 431 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 22/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL N L+ +K A ++ PG T+ L V + + LVD Sbjct: 3 KVVIVGRPNVGKSSLFNRLL-KKRSAVVADVPGVTRDLKEGVV------ETDRGRFLLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +K + + R L + V +D R + Q D +V +L +K Sbjct: 56 TGGLWSGDKWEKKI---QEKVDRALEDAE---VVLFAVDGRAELTQADYEVAEYLRRKGK 109 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V TK+D + L YL Y + IPTSS +G+E L +AI E + Sbjct: 110 PVILVATKVD-----DPKHEL----YLGPLYGLGFGDPIPTSSEHARGLEELLEAIWERL 160 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 19/190 (10%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 +I P+ +A GR N GKSSL+N ++ + + S PG T+ Sbjct: 164 QIETEPEVAGIRLAIVGRPNAGKSSLLNAILGEERV-IVSEEPGTTRDAI------DVEF 216 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 LVD G + P+ V+ I R L V L++D + D+ Sbjct: 217 FFGGQRFVLVDTAGIR--KRPENLVEELA--IRRSLRAMDEADVVLLVVD---PFQVGDR 269 Query: 140 D--VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + + + + +V+TK D + A + + + + P V TS++ R+ Sbjct: 270 ELKLANEALDRGKPVLLVITKWDLVDKEDAPKMRRLLREKLA-HLDHLPRVF-TSALTRQ 327 Query: 198 GIEVL-RKAI 206 ++ + R+A+ Sbjct: 328 NLDRIFREAV 337 >gi|254568034|ref|XP_002491127.1| Putative protein of unknown function [Pichia pastoris GS115] gi|238030924|emb|CAY68847.1| Putative protein of unknown function [Pichia pastoris GS115] gi|328352347|emb|CCA38746.1| tRNA modification GTPase mnmE [Pichia pastoris CBS 7435] Length = 323 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 15/164 (9%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 PE+ F GR NVGKSSLIN L++ K LAR G T LN + N + Sbjct: 139 DLPEVLFLGRCNVGKSSLINSLID-KPLARVKRFAGLTPCLNTY---------NIGNVVR 188 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD PGYG K G L ++Y+ ER LR +YL+++ G+ + D+ + S L + Sbjct: 189 LVDSPGYGV-----KGKQWQGELTMQYIRERQQLRKIYLILNAHLGINEFDEMILSQLVE 243 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 +S+ +V K+DK+SP + ++ + + PT Sbjct: 244 SKISFDLVFNKVDKISPAQRRTHCDQIVEQLLKTSQISKLMRPT 287 >gi|46199327|ref|YP_004994.1| GTP-binding protein EngA [Thermus thermophilus HB27] gi|46196952|gb|AAS81367.1| GTP-binding protein [Thermus thermophilus HB27] Length = 431 Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 22/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL N L+ +K A ++ PG T+ L V + + LVD Sbjct: 3 KVVIVGRPNVGKSSLFNRLL-KKRSAVVADVPGVTRDLKEGVV------ETDRGRFLLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +K + + R L + V +D R + Q D +V +L +K Sbjct: 56 TGGLWSGDKWEKKI---QEKVDRALEDAE---VVLFAVDGRAELTQADYEVAEYLRRKGK 109 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V TK+D + L YL Y + IPTSS +G+E L +AI E + Sbjct: 110 PVILVATKVD-----DPKHEL----YLGPLYGLGFGDPIPTSSEHARGLEELLEAIWERL 160 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 19/190 (10%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 +I P+ +A GR N GKSSL+N ++ + + S PG T+ Sbjct: 164 QIETEPEVAGIRLAIVGRPNAGKSSLLNAILGEERV-IVSEEPGTTRDAI------DVEF 216 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 LVD G + P+ V+ I R L V L++D + D+ Sbjct: 217 FFGGQRFVLVDTAGIR--KRPESLVEELA--IRRSLRAMDEADVVLLVVD---PFQVGDR 269 Query: 140 D--VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + + + + +V+TK D + A + + + + P V TS++ R+ Sbjct: 270 ELKLANEALDRGKPVLLVITKWDLVDKEDAPKMRRLLREKLA-HLDHLPRVF-TSALTRQ 327 Query: 198 GIEVL-RKAI 206 ++ + R+A+ Sbjct: 328 NLDRIFREAV 337 >gi|268593180|ref|ZP_06127401.1| ribosome-associated GTPase EngA [Providencia rettgeri DSM 1131] gi|291311226|gb|EFE51679.1| ribosome-associated GTPase EngA [Providencia rettgeri DSM 1131] Length = 492 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 75/185 (40%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 201 PTTLPIKLAIVGRPNVGKSTLTNRILGEERVV-VFDMPGTTRDSIYI------PMERDER 253 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 254 EYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSLLGF 311 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D + P + + + +R + S++ G+ L + Sbjct: 312 ILNAGRSLVIAVNKWDGMKPEDREHVKDMLE--LRLGFVDFARIHFISALHGSGVGNLFE 369 Query: 205 AILET 209 ++ E Sbjct: 370 SVQEA 374 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 24/182 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVETH--MAAQSLQAIEEADIVLFMVDARAGLMPADEGIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K D + TTA + Y E+ P ++ +G+ L I + Sbjct: 110 KKKTYLVANKTDGIDVTTA---------IGDFYSLGLGEIHPIAASHGRGVTQL---IEQ 157 Query: 209 TI 210 ++ Sbjct: 158 SL 159 >gi|37525336|ref|NP_928680.1| GTP-binding protein EngA [Photorhabdus luminescens subsp. laumondii TTO1] gi|41017002|sp|Q7N702|DER_PHOLL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|36784763|emb|CAE13673.1| GTP-binding protein EngA [Photorhabdus luminescens subsp. laumondii TTO1] Length = 493 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 75/190 (39%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 199 DFDPSTLPLKLAIVGKPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 251 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G + V+ + +++ L V L+ID R G+ D + Sbjct: 252 DGREYILIDTAGVRKRGKITETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDLSL 309 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S I + K D +S + E Y + V S++ G+ Sbjct: 310 LGFILNSGRSLVIAVNKWDGMSQEDKERVKEMLDYRLG--FVDFARVHFISALHGSGVGN 367 Query: 202 LRKAILETIN 211 L +ILE + Sbjct: 368 LFDSILEAYD 377 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGQEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEDGVETH--MAAQSLLAIEEADIVLFMVDARAGLMPADHAIAKHLRGR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + TA + Y ++ ++ +G+ L + +L Sbjct: 110 EKATFLVANKTDGVDIDTA---------IAEFYSLGLGDIYSIAASHGRGVTQLIERVL 159 >gi|109033061|ref|XP_001105772.1| PREDICTED: GTP-binding protein 8-like isoform 1 [Macaca mulatta] Length = 251 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 80/195 (41%), Gaps = 46/195 (23%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 ++ I P PE G T+ +NFF Sbjct: 95 YVSSAVRIDHAPDLPRPE-------------------------------GHTKKMNFFKV 123 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +VDMPGYGY RAP+ VD ++ YL ER L+ +LL+D G Sbjct: 124 GKH---------FTVVDMPGYGY-RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVG 169 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLIRNYPTAHPEVIPTS 192 +++ D ++ A+ Y IVLTKIDK S ++ L+ K++ P++ P S Sbjct: 170 IQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNTKTQGCFPQLFPVS 229 Query: 193 SVKRKGIEVLRKAIL 207 SV GI +LR I Sbjct: 230 SVTFSGIHLLRSFIA 244 >gi|290475995|ref|YP_003468891.1| GTP-binding protein, essential for cell growth [Xenorhabdus bovienii SS-2004] gi|289175324|emb|CBJ82127.1| GTP-binding protein, essential for cell growth [Xenorhabdus bovienii SS-2004] Length = 496 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 205 PTTLPLKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGR 257 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L++D R GV D + F Sbjct: 258 EYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLIVDAREGVSDQDLSLLGF 315 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D +S + +R V S++ G+ L Sbjct: 316 ILNSGRSLVIAVNKWDGMSQEDRDHVKDMLD--LRLGFVDFARVHFISALHGSGVGNLFD 373 Query: 205 AILET 209 +ILE Sbjct: 374 SILEA 378 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGQEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEDGVETH--MAAQSLMAIEEADIVLFMVDARSGMMPADHAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + TA + Y ++ ++ +G+ L + +L Sbjct: 110 EKATFLVANKTDGIDTDTA---------IPEFYSLGLGDIYSIAASHGRGVTQLIEHVL 159 >gi|158260245|dbj|BAF82300.1| unnamed protein product [Homo sapiens] Length = 251 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 49/209 (23%) Query: 3 SHTIFT---KSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 + IFT ++ ++ I P PE Sbjct: 81 ADNIFTATERNRIDYVSSAVCIDHAPDLPRPE---------------------------- 112 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 G T+ +NFF +VDMPGYG+ RAP+ VD ++ YL ER Sbjct: 113 ---GHTKKMNFFKVGKH---------FTVVDMPGYGF-RAPEDFVD----MVETYLKERR 155 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLI 178 L+ +LL+D G+++ D ++ A+ Y IVLTKIDK S ++ L+ K++ Sbjct: 156 NLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVN 215 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 P++ P S+V GI +LR I Sbjct: 216 MKTQGCFPQLFPVSAVTFSGIHLLRCFIA 244 >gi|212710611|ref|ZP_03318739.1| hypothetical protein PROVALCAL_01677 [Providencia alcalifaciens DSM 30120] gi|212686692|gb|EEB46220.1| hypothetical protein PROVALCAL_01677 [Providencia alcalifaciens DSM 30120] Length = 492 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 11/190 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E P P ++A GR NVGKS+L N ++ + + PG T+ + + Sbjct: 196 EDDFDPSTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PM 248 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 249 ERDEREYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQDL 306 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + F+ S I + K D + P + + + +R + S++ G+ Sbjct: 307 SLLGFILNAGRSLVIAVNKWDGMKPEDREHVKDMLE--LRLGFVDFARIHFISALHGSGV 364 Query: 200 EVLRKAILET 209 L +++ E Sbjct: 365 GNLFESVQEA 374 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVETH--MAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K D + + Y E+ P ++ +G+ L + Sbjct: 110 KKKTYLVANKTDGIDANIV---------VGDFYSLGLGEIYPIAASHGRGVTQLIEH 157 >gi|329297578|ref|ZP_08254914.1| GTP-binding protein Der [Plautia stali symbiont] Length = 496 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P ++A GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 203 PTGLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDDR 255 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G V+ + +++ L V L+ID R G+ D + F Sbjct: 256 EYILIDTAGVRKRGKITDTVEKFS--VIKTLQAIEDANVVMLVIDARAGISDQDLSLLGF 313 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D LS E + + + V S++ G+ L + Sbjct: 314 ILNSGRSLVIVVNKWDGLSQEIKDEVKDTLDFRLG--FIDFARVHFISALHGSGVGNLFE 371 Query: 205 AILETIN 211 ++ E + Sbjct: 372 SVTEAYD 378 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V+ + + L V L+D R GV DQ + + L + Sbjct: 55 IDTGGI---DGTEEGVE--NRMAEQSLLAIEEADVVLFLVDARAGVMPADQQIANHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + V K D L P A ++ Y E+ P ++ +G+ L + Sbjct: 110 DKATFFVANKTDGLDPDAA---------VLDFYALGLGEIHPIAASHGRGVTSLLET 157 >gi|225849583|ref|YP_002729817.1| GTP-binding protein EngA [Persephonella marina EX-H1] gi|254783162|sp|C0QT02|DER_PERMH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|225645742|gb|ACO03928.1| ribosome-associated GTPase EngA [Persephonella marina EX-H1] Length = 447 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 13/188 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K+ ++A G+ N GKSSL+N ++ + A S PG T+ + + + Sbjct: 179 KSDVIKVAIVGKPNAGKSSLLNAILGEER-AVVSEIPGTTRDVV------DTLFEWKDQK 231 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G ++ + I R L + +ID + G + D + + Sbjct: 232 FLFLDTAGLRKKSKVDYGIEFFS--IGRTLDAIKKADVIVHVIDAQQGATEQDTKIAHLI 289 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLR 203 K IV+ KID + P E L + K +R Y + ++ TS+ RKGI+ L Sbjct: 290 QKYTKPAVIVINKIDTVPPK--SEVLNRIKNQVRERLYFIPYAPIVMTSAKNRKGIKQLL 347 Query: 204 KAILETIN 211 K I + N Sbjct: 348 KEITDVYN 355 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N ++ ++ A + PG T+ S + +VD Sbjct: 4 VAIVGRPNVGKSSLFNRIIGKRK-AIVEDIPGVTRDRIV------STAEWRGVTFEVVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTL-RCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 GY + + D++ I + + + L L++D + G+ D+++ L + Sbjct: 57 GGYI-----ESDKDTFAPYIRKQIEKELELSDAFILVVDGKEGLTPADKEIARILHRTDK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KID E K + Y +V P SS+++ G+ L A+++ I Sbjct: 112 PVYVAVNKID---------NPEMEKAIYEFYELGFEKVFPVSSIQKYGVADLLDAVVQDI 162 >gi|323451478|gb|EGB07355.1| hypothetical protein AURANDRAFT_65026 [Aureococcus anophagefferens] Length = 658 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 70/142 (49%), Gaps = 20/142 (14%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 + LP+ GPPE+ GRSNVGKSSL N L+ R+ LA TS PGRT+ +F+ Sbjct: 468 TADAMARLPEPGPPEVVLLGRSNVGKSSLANALLGRRALAPTSPVPGRTRRFHFYDVNSG 527 Query: 77 SNLKNNLPAMALVDMPGYGY-------------------ARAPKKNVDSWGGLIVRYLSE 117 ++ P ALVD+PG G+ A A DSW L RYL Sbjct: 528 DGAESERPRFALVDVPGAGFAVSDVAAALEDGGLARPGVAEAAGGKQDSWRSLTARYLDV 587 Query: 118 RSTLRCVYLLIDCRHGVKQIDQ 139 R +L V L+D + +++D+ Sbjct: 588 RDSLAVVLQLVD-KLKPRELDR 608 >gi|315231766|ref|YP_004072202.1| EngB-like GTP-binding protein [Thermococcus barophilus MP] gi|315184794|gb|ADT84979.1| EngB-like GTP-binding protein [Thermococcus barophilus MP] Length = 190 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 26/193 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L +K + PG T+ + ++ ++DM Sbjct: 2 IIFVGRSNVGKSTLIYRLTGKK--VKRGKKPGVTRKPIEIIWRNK----------RVIDM 49 Query: 92 PGYGYAR-APKKNVDSWGGLIVRYLSERS-TLRCVYLLIDC-----------RHGVKQID 138 PG+G+ PK + IVR++ E + + L+ID R G ID Sbjct: 50 PGFGFMSGIPKHVQERIKTDIVRFIEEHAGEIEVAVLVIDGKSALEIIERWERRGEIPID 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI-PTSSVKRK 197 + F FL + + + + K+DK+ + K+ + + E+ P S+ Sbjct: 110 VEFFQFLQELNIPTVVAVNKLDKIKNVSLTINKLIEKFGLSGTWEDYKELFVPVSAKFGT 169 Query: 198 GIEVLRKAILETI 210 IE LRK I + I Sbjct: 170 NIEELRKVIDKKI 182 >gi|149060439|gb|EDM11153.1| GTP-binding protein 8 (putative), isoform CRA_c [Rattus norvegicus] Length = 252 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 22/187 (11%) Query: 30 PEIAFSGRS-NVGKSSLINILVNRKNLARTSNAP------GRTQHLNFFVPKDFSNLKNN 82 P + GR+ +V +++ N + + R +AP G T+ +NFF Sbjct: 74 PSLEDIGRAESVFAATVRNRIEYLSSAVRLDHAPSLRQPEGHTKKMNFFKVGKH------ 127 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 LVDMPGYGY RAP+ VD ++ YL ER+ L+ +LL+D G+ ++D Sbjct: 128 ---FTLVDMPGYGY-RAPEDFVD----MVETYLKERNNLKRTFLLVDSVVGITKLDNIAI 179 Query: 143 SFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ A+ Y ++LTKIDK S ++ L+ +++ P++ P S+V G+ + Sbjct: 180 EMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQEFVNTQTQGCFPQLFPISAVTYSGVHL 239 Query: 202 LRKAILE 208 L+ I + Sbjct: 240 LKCFIAD 246 >gi|254417083|ref|ZP_05030829.1| GTPase, putative [Microcoleus chthonoplastes PCC 7420] gi|196176061|gb|EDX71079.1| GTPase, putative [Microcoleus chthonoplastes PCC 7420] Length = 461 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 9/196 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVP 73 + +P +G+LP +A GR NVGKSSL+N L K A S+ G T+ ++ V Sbjct: 162 ITHLPTVGMLPDTSEINVAIVGRPNVGKSSLLNALTGEKR-AIVSSVSGTTRDAIDMIVE 220 Query: 74 KDFSNLKNNLPAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + + L+D G + + + +G I R V ++D Sbjct: 221 RPGNPETETESQLYRLIDTAGIRRKKNVEYGPEFFG--INRAFKAIRRADVVLFVVDALD 278 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIP 190 GV + DQ + + + + I++ K D + T T+ + + L++N Y +I Sbjct: 279 GVTEQDQKLAGRIAEDGRAAVILVNKWDAIEKDTY--TIYEYEKLLKNRLYFVEWAPMIF 336 Query: 191 TSSVKRKGIEVLRKAI 206 S++ K ++ + + Sbjct: 337 VSALTGKRVDKILDLV 352 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 69/182 (37%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A + PG T+ + + ++ Sbjct: 3 LPVVAVIGRPNVGKSTLVNRLAGVMD-AIVHDQPGVTRD------RTYRPAFWQDRDYSI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + ++ S L++D + G D + +L + Sbjct: 56 VDTGGLVF----DDDTEFLPLIREQAMAALSEASAAILVVDGQMGPTAADYAIADWLRQH 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + Q ++ ++ + E P S++ G L ++ Sbjct: 112 PVPVVLAVNKC----ESPQQGLIQAAEF----WELGLGEPFPVSAIHGAGTGELLDQLIT 163 Query: 209 TI 210 + Sbjct: 164 HL 165 >gi|261345330|ref|ZP_05972974.1| ribosome-associated GTPase EngA [Providencia rustigianii DSM 4541] gi|282566664|gb|EFB72199.1| ribosome-associated GTPase EngA [Providencia rustigianii DSM 4541] Length = 491 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 11/193 (5%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 E P P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 192 SDEEDDFDPSTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI----- 245 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 ++ + L+D G + V+ + +++ L V L+ID R G+ Sbjct: 246 -PMERDEREYILIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDANVVLLVIDAREGISD 302 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + F+ S I + K D + P + + +R + S++ Sbjct: 303 QDLSLLGFILNAGRSLVIAVNKWDGMKPEDRDHVKDMLE--LRLGFVDFARIHFISALHG 360 Query: 197 KGIEVLRKAILET 209 G+ L +++ E Sbjct: 361 SGVGNLFESVQEA 373 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGHEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVETH--MAAQSLQAIEEADVVLFMVDARAGLMPADEGIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K D + + Y E+ P ++ +G+ L + Sbjct: 110 KKKTYLVANKTDGIDANIV---------VGDFYSLGLGEIYPIAASHGRGVTQLIEH 157 >gi|311270000|ref|XP_003132725.1| PREDICTED: GTP-binding protein 8-like isoform 2 [Sus scrofa] Length = 240 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 49/210 (23%) Query: 3 SHTIFTKSA---WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 + +IFT SA ++ + P PE Sbjct: 63 AESIFTASARNRIDYVSSAVRLDHAPDLRCPE---------------------------- 94 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 G T+ +NFF + LVDMPGYGY RAP+ VD ++ YL ER Sbjct: 95 ---GHTKKMNFFKVGRY---------FTLVDMPGYGY-RAPEDFVD----MVEDYLKERR 137 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLI 178 L +LL+D G+++ D ++ A+ Y +VLTKIDK S ++ L+ K++ Sbjct: 138 NLMRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVMVLTKIDKSSKGRLLKQVLQIQKFVD 197 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 P++ P S+V GI +LR I + Sbjct: 198 TETQGCFPQLFPVSAVTFSGIHLLRCFIAD 227 >gi|328950011|ref|YP_004367346.1| GTP-binding protein engA [Marinithermus hydrothermalis DSM 14884] gi|328450335|gb|AEB11236.1| GTP-binding protein engA [Marinithermus hydrothermalis DSM 14884] Length = 431 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 75/181 (41%), Gaps = 24/181 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL N L+ R++ A ++ PG T+ L V + + LVD Sbjct: 3 KVVIVGRPNVGKSSLYNRLLGRRD-AVVADEPGVTRDLKEAVI------ETDRGRFKLVD 55 Query: 91 MPGYGYARAPK-KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G A + K + I V L+D R Q D +V +L ++ Sbjct: 56 TGGLWSGDAWEPKIQEKVDRAI-------QDADLVLFLVDGRADPTQADFEVADYLRRQP 108 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V TK+D + +YL Y IPTS R+G++ L AI E Sbjct: 109 TPVLLVATKVD---------DPKHEQYLGELYALGFGAPIPTSVEHRRGLDALVDAIWER 159 Query: 210 I 210 + Sbjct: 160 L 160 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 19/185 (10%) Query: 26 KAGPPEI-----AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + PE+ A GR N GKSSL+N ++ + + S PG T+ Sbjct: 166 EDAEPEVEALRLAIIGRPNAGKSSLMNAILGEERV-IVSEQPGTTRDAI------DVEFD 218 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 LVD G + P+ V+ + I R V L++D + + Sbjct: 219 YGGQRFVLVDTAGIR--KRPETAVEYFA--IQRSHRVIREADVVVLVVDPF-ELGDRELK 273 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + + + ++K D++ A+ + + + + +I TS+V + + Sbjct: 274 MANEALEAGRPTILAVSKWDRVPKDEARRVRAEIREKLAHLERL--PLIYTSAVTGQNLH 331 Query: 201 VLRKA 205 L Sbjct: 332 KLLSE 336 >gi|221632763|ref|YP_002521985.1| GTP-binding protein EngA [Thermomicrobium roseum DSM 5159] gi|254783175|sp|B9KZ43|DER_THERP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|221155859|gb|ACM04986.1| ribosome-associated GTPase EngA [Thermomicrobium roseum DSM 5159] Length = 460 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 14/182 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P++A GR NVGKS+L N L+ ++ A PG T+ + + ++++L+ L Sbjct: 3 LPQVAIVGRPNVGKSTLFNRLLRQRR-AIVEEVPGTTRDRIYGIV-EWNDLRFGLFDTGG 60 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 + + ++ V++ ++E V ++D G D +V FL + Sbjct: 61 LLTEEEIERSSERELVEATKAQAELAIAE---ADLVIFVVDASAGPTAGDWEVADFLRRT 117 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K E+ E+ ++ Y + IP S++ +GI L AI E Sbjct: 118 DKPILLVANKA---------ESREREFNALQFYELGLGDPIPVSALHGRGIADLLDAIAE 168 Query: 209 TI 210 + Sbjct: 169 RL 170 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 66/177 (37%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A P+IA GR NVGKS+L+N ++ + S PG T+ + L Sbjct: 180 EAEAPKIAIVGRPNVGKSALLNAILGQPRQ-IVSPIPGTTRDAV------DTELVWKGQP 232 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G ++ ++ + L ERS L++D DQ V + Sbjct: 233 IVLIDTAGIRRPGRIERGIERYSILRAERAIERSD--VAILVVDATEPFTHQDQAVAGKV 290 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIE 200 + + K D + E + R P ++ S++ K +E Sbjct: 291 LDAKKGIVVAINKWDLFEHMEGEGAREAFEEDAREAFHFMPWAPLVFVSALTGKNVE 347 >gi|291400671|ref|XP_002716747.1| PREDICTED: GTP-binding protein 8 isoform 1 [Oryctolagus cuniculus] Length = 256 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 84/209 (40%), Gaps = 49/209 (23%) Query: 3 SHTIFTKSA---WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 + + FT S +L + P PE Sbjct: 81 AESFFTASPRNRIEYLSSAVRLDHAPDLPRPE---------------------------- 112 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 G T+ +NFF + LVDMPGYGY RAP+ VD ++ YL ER Sbjct: 113 ---GHTKKMNFFKVGKY---------FTLVDMPGYGY-RAPEDFVD----MVETYLKERR 155 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLI 178 L+ +LL+D G+ + D ++ A+ Y +VLTK DK S ++ L+ K++ Sbjct: 156 NLKRTFLLVDSVVGITKTDNIAIEMCEEFALPYVMVLTKTDKSSKGHLLKQVLQIQKFVN 215 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 P++ P S+V GI +L+ I Sbjct: 216 MQTQGCFPQLFPVSAVTHSGIHLLKCFIA 244 >gi|315186467|gb|EFU20227.1| ribosome-associated GTPase EngA [Spirochaeta thermophila DSM 6578] Length = 450 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 13/186 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P A ++A G+ N GKS+L+N L+ + A S+APG T+ L + Sbjct: 184 GDAPSAPEIDVAILGKPNTGKSTLLNTLLGEER-ALVSDAPGTTRDLL------EGRFQY 236 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 +VD G + +++ + + R L V+LLID + G+ + D+ + Sbjct: 237 RGRWFRIVDTAGIRRRSRIEDDLEFYS--VRRSLKVIEEAHVVFLLIDAQEGLTEQDKKI 294 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVKRKGI 199 + ++ +VL K D L+P + K IR + + ++ S+ + +GI Sbjct: 295 AAVAQRRGRGVILVLNKWDALTP--VPNQFQAMKARIRFFFPHMDYAPIVKISARRGEGI 352 Query: 200 EVLRKA 205 + L Sbjct: 353 DKLLDT 358 Score = 86.0 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 72/190 (37%), Gaps = 31/190 (16%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ P + GR NVGKS+L N L+ R+ A T PG T+ ++ L Sbjct: 14 QSRLPRVVIVGRPNVGKSTLFNRLIGRRK-AITHPRPGVTRD----AVEETWELGGGR-- 66 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLI-VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + LVD G + + L+ R L E + L++D V + Sbjct: 67 VLLVDTGGI-----TSERGGIFEPLVRERALREVDRADVLLLVLDVTELVPED-----EE 116 Query: 145 LDKKAVSY----QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 L + Y +V+ K+D A+E + + V TS+ +GI+ Sbjct: 117 LLELLRPYKERLILVVNKVD----NEAREEMAW-----NFFSLGFDTVCFTSAEHGRGID 167 Query: 201 VLRKAILETI 210 L + I + Sbjct: 168 ELEQEIERRL 177 >gi|307718980|ref|YP_003874512.1| GTP-binding protein EngA [Spirochaeta thermophila DSM 6192] gi|306532705|gb|ADN02239.1| GTP-binding protein EngA [Spirochaeta thermophila DSM 6192] Length = 450 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 13/186 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G P A ++A G+ N GKS+L+N L+ + A S+APG T+ L + Sbjct: 184 GDAPSAPEIDVAILGKPNTGKSTLLNTLLGEER-ALVSDAPGTTRDLL------EGRFQY 236 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 +VD G + +++ + + R L V+LLID + G+ + D+ + Sbjct: 237 RGRWFRIVDTAGIRRRSRIEDDLEFYS--VRRSLKVIEEAHVVFLLIDAQEGLTEQDKKI 294 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVKRKGI 199 + ++ +VL K D L+P + K IR + + ++ S+ + +GI Sbjct: 295 AAVAQRRGRGVILVLNKWDALTP--VPNQFQAMKARIRFFFPHMDYAPIVKISARRGEGI 352 Query: 200 EVLRKA 205 + L Sbjct: 353 DKLLDT 358 Score = 85.2 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 70/187 (37%), Gaps = 31/187 (16%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + GR NVGKS+L N L+ R+ A T PG T+ ++ L + L Sbjct: 17 LPRVVIVGRPNVGKSTLFNRLIGRRK-AITHPRPGVTRD----AVEETWELGGGR--VLL 69 Query: 89 VDMPGYGYARAPKKNVDSWGGLI-VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 VD G + + L+ R L E + L++D V + L + Sbjct: 70 VDTGGI-----TSERGGIFEPLVRERALREVDRADVLLLVLDVTELVPED-----EELLE 119 Query: 148 KAVSY----QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 Y +V+ K+D A+E + + V TS+ +GI+ L Sbjct: 120 LLRPYKERLILVVNKVD----NEAREEMAW-----NFFSLGFDTVCFTSAEHGRGIDELE 170 Query: 204 KAILETI 210 + I + Sbjct: 171 QEIERRL 177 >gi|14520404|ref|NP_125879.1| GTP-binding protein [Pyrococcus abyssi GE5] gi|5457619|emb|CAB49110.1| GTP-binding protein [Pyrococcus abyssi GE5] Length = 190 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 26/192 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L ++ R PG T+ + ++ N K ++DM Sbjct: 4 IVFVGRSNVGKSTLIYRLTGKR--VRRGKRPGVTRKIIEI---EWKNHK-------IIDM 51 Query: 92 PGYGY-ARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDC-----------RHGVKQID 138 PG+G+ A PK+ + IV ++ + ++ + L++D + G ID Sbjct: 52 PGFGFMAGLPKEVQERIKDEIVHFIEDNASKIDVAVLVVDGKAAPEIIERWEKRGEIPID 111 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + FL + + + + K+DK+ K+ + + IP S+ Sbjct: 112 VEFYQFLRELNIPTVVAVNKLDKIKNVQRVVHFLAEKFEV-PWDEIDKTFIPISAKFGDN 170 Query: 199 IEVLRKAILETI 210 +E L+ I E I Sbjct: 171 VEKLKNRIYEII 182 >gi|95930679|ref|ZP_01313413.1| Small GTP-binding protein domain [Desulfuromonas acetoxidans DSM 684] gi|95133331|gb|EAT14996.1| Small GTP-binding protein domain [Desulfuromonas acetoxidans DSM 684] Length = 436 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N ++ + A + PG T+ N+ + L+D Sbjct: 4 VAIVGRPNVGKSTLFNRILGERK-AIVEDYPGVTRDRNYADVTRYDK------PFTLIDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ P V + + + ++D R G+ D++V L + Sbjct: 57 GGF----EPVSEVRMLVQMREQSQLAIEEADVILFVMDGRDGLTPSDEEVAEMLRRVDKP 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 V+ K+D Y TS+ +G+ L AIL+ + Sbjct: 113 VLFVVNKVDGDKQEEQAA---------EFYSLGIEHFFVTSAEHGRGMGELMAAILDEL 162 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 79/200 (39%), Gaps = 20/200 (10%) Query: 18 VPEIGLLPK-----AGPPEI--AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + LP+ E+ A GR NVGKSSL+N L+ + + + G T+ Sbjct: 156 AAILDELPEVKTVEDDSAEVRLAVIGRPNVGKSSLVNKLLGYERVV-ANPTAGTTRDSV- 213 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + N L+D G + ++ + +V+ L V ++ID Sbjct: 214 -----DTPFTYNNQRYVLIDTAGIRRKGKVSQKLEKYS--VVQALKGMDRAHVVMVVIDA 266 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR--NYPTAHPEV 188 G+ + D + + + + +V+ K D L+ +T++K +R + + Sbjct: 267 EEGITEQDLTIAGYAYDRGRAVVLVVNKWDTLTKD--NQTMKKFTDEVRGQFKFLSFAPI 324 Query: 189 IPTSSVKRKGIEVLRKAILE 208 + S++ + + + + + + Sbjct: 325 MFVSALTGQRVAKIMETVED 344 >gi|300817719|ref|ZP_07097934.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1] gi|300529707|gb|EFK50769.1| ribosome-associated GTPase EngA [Escherichia coli MS 107-1] Length = 499 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 204 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 256 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID G+ D + Sbjct: 257 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAHEGISDQDLSL 314 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 315 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 372 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 373 LFESVREAYD 382 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|331673966|ref|ZP_08374729.1| ribosome-associated GTPase EngA [Escherichia coli TA280] gi|331069239|gb|EGI40631.1| ribosome-associated GTPase EngA [Escherichia coli TA280] Length = 503 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 208 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 260 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ D Sbjct: 261 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSQ 318 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 319 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 376 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 377 LFESVREAYD 386 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 15 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 67 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 68 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 122 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 123 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 172 >gi|320175074|gb|EFW50187.1| GTP-binding protein EngA [Shigella dysenteriae CDC 74-1112] Length = 490 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P++ P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 DFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMER 247 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R G+ + + Sbjct: 248 DGREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQELSL 305 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D LS ++ E + + V S++ G+ Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLG--FIDFARVHFISALHGSGVGN 363 Query: 202 LRKAILETIN 211 L +++ E + Sbjct: 364 LFESVREAYD 373 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|238788166|ref|ZP_04631961.1| GTP-binding protein engA [Yersinia frederiksenii ATCC 33641] gi|238723753|gb|EEQ15398.1| GTP-binding protein engA [Yersinia frederiksenii ATCC 33641] Length = 494 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 11/192 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E P + P ++A GR NVGKS+L N ++ + + PG T+ + + Sbjct: 197 EDDFDPLSLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PM 249 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 250 TRDEREYILIDTAGVRKRGKITEAVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQDL 307 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + F+ S I + K D +S + + +R + S++ G+ Sbjct: 308 SLLGFILNSGRSLVIAVNKWDGMSEEARAQVKDMLD--LRLGFVDFARIHFISALHGSGV 365 Query: 200 EVLRKAILETIN 211 L ++I E + Sbjct: 366 GNLFESIQEAYD 377 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + P TA Y EV ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDPDTATA---------DFYSLGLGEVHAIAASHGRGVTQL 154 >gi|300712024|ref|YP_003737838.1| GTP-binding protein [Halalkalicoccus jeotgali B3] gi|299125707|gb|ADJ16046.1| GTP-binding protein [Halalkalicoccus jeotgali B3] Length = 206 Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 29/201 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 EIAF GRSNVGKS+L+ T PG T+ N + D++ Sbjct: 6 PDRGSEIAFVGRSNVGKSTLMREFTGH--TFTTGKKPGVTRSPNHY---DWAG-----AD 55 Query: 86 MALVDMPGYGYARAPKK-NVDSWGGLIVRYLSE--RSTLRCVYL-----LIDC--RH--- 132 D+PG+G+ ++ ++ IV+Y+ E L V + +ID RH Sbjct: 56 FTFTDLPGFGFMEGVEEGTREAIKTDIVQYIEEHSAEILVGVLVVDGKAVIDIIDRHSER 115 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI---RNYPTAHPEVI 189 G D ++F FL + + + + K+DK+ E L+ + + V Sbjct: 116 GEVPHDVEMFHFLREVEIPTVVAVNKMDKVD--DRDERLDALCDRLGLPGPWQQWRDVVA 173 Query: 190 PTSSVKRKGIEVLRKAILETI 210 P S+ + + I+ LR+A+ + Sbjct: 174 PISAKRGQ-IDPLREALETHL 193 >gi|238794826|ref|ZP_04638427.1| GTP-binding protein engA [Yersinia intermedia ATCC 29909] gi|238725839|gb|EEQ17392.1| GTP-binding protein engA [Yersinia intermedia ATCC 29909] Length = 495 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 75/193 (38%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 E P+ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 197 AEDDFDPRTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------P 249 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 250 MTRDEREYILIDTAGVRKRGKITETVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQD 307 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S I + K D ++ + + +R + S++ G Sbjct: 308 LSLLGFILNSGRSLVIAVNKWDGMTEEARAQVKDMLD--LRLGFVDFARIHFISALHGSG 365 Query: 199 IEVLRKAILETIN 211 + L ++I E + Sbjct: 366 VGNLFESIQEAYD 378 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + P TA Y EV ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDPDTATA---------DFYSLGLGEVHAIAASHGRGVTQL 154 >gi|282165547|ref|YP_003357932.1| GTP-binding protein [Methanocella paludicola SANAE] gi|282157861|dbj|BAI62949.1| GTP-binding protein [Methanocella paludicola SANAE] Length = 212 Score = 124 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 29/196 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ F GRSNVGKS+L+ L+ K R PG TQ N++ D + + D Sbjct: 17 EVVFIGRSNVGKSTLMRQLIGLK--VRVGKRPGVTQRPNYYQFGD----------LLVTD 64 Query: 91 MPGYGYARAPKKNVD-SWGGLIVRYLS-ERSTLRCVYLLIDCR-----------HGVKQI 137 MPGYGY + LIV+Y + C ++D + G I Sbjct: 65 MPGYGYMKGVDYRKQHKLRDLIVKYFEDNAPRIVCAVQVVDAKSFSEVVDRWDGRGEVPI 124 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSV 194 D ++F+FL + + + K+D + L+ + P + P S+ Sbjct: 125 DLELFAFLRDLNIPVIVAVNKMDNIYDREKNMVLDDIALRLGFSPPWSGWMDRIAPISAK 184 Query: 195 KRKGIEVLRKAILETI 210 K ++ LRK + + + Sbjct: 185 KGD-VDHLRKLLKDKL 199 >gi|238797968|ref|ZP_04641458.1| GTP-binding protein engA [Yersinia mollaretii ATCC 43969] gi|238718173|gb|EEQ09999.1| GTP-binding protein engA [Yersinia mollaretii ATCC 43969] Length = 495 Score = 124 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 76/193 (39%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 E P++ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 197 VEDDFDPRSLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSIYI------P 249 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 250 MTRDEREYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQD 307 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S I + K D ++ + + +R + S++ G Sbjct: 308 LSLLGFILNSGRSLVIAVNKWDGMTEEARAQVKDMLD--LRLGFVDFARIHFISALHGSG 365 Query: 199 IEVLRKAILETIN 211 + L ++I E + Sbjct: 366 VGNLFESIQEAYD 378 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + P TA Y EV ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDPDTATA---------DFYSLGLGEVHAIAASHGRGVTQL 154 >gi|123441422|ref|YP_001005409.1| GTP-binding protein EngA [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166225934|sp|A1JKS6|DER_YERE8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|122088383|emb|CAL11174.1| putative GTP-binding protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 494 Score = 124 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + P ++A GR NVGKS+L N ++ + + PG T+ + + + Sbjct: 202 PLSLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMTRDER 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYILIDTAGVRKRGKITEAVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D +S + + +R + S++ G+ L + Sbjct: 313 ILNSGRSLVIAVNKWDGMSEEARAQVKDMLD--LRLGFVDFARIHFISALHGSGVGNLFE 370 Query: 205 AILETIN 211 +I E + Sbjct: 371 SIQEAYD 377 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + P TA Y EV ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDPDTATA---------DFYSLGLGEVHAIAASHGRGVTQL 154 >gi|332162632|ref|YP_004299209.1| GTP-binding protein EngA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606735|emb|CBY28233.1| GTP-binding protein EngA [Yersinia enterocolitica subsp. palearctica Y11] gi|325666862|gb|ADZ43506.1| GTP-binding protein EngA [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859281|emb|CBX69631.1| GTP-binding protein engA [Yersinia enterocolitica W22703] Length = 494 Score = 124 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + P ++A GR NVGKS+L N ++ + + PG T+ + + + Sbjct: 202 PLSLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMTRDER 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYILIDTAGVRKRGKITEAVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D +S + + +R + S++ G+ L + Sbjct: 313 ILNSGRSLVIAVNKWDGMSEEARAQVKDMLD--LRLGFVDFARIHFISALHGSGVGNLFE 370 Query: 205 AILETIN 211 +I E + Sbjct: 371 SIQEAYD 377 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + P TA Y EV ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDPDTATA---------DFYSLGLGEVHAIAASHGRGVTQL 154 >gi|114320504|ref|YP_742187.1| GTP-binding protein Era [Alkalilimnicola ehrlichii MLHE-1] gi|114226898|gb|ABI56697.1| GTP-binding protein Era [Alkalilimnicola ehrlichii MLHE-1] Length = 315 Score = 124 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 26/194 (13%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 LP +A GR NVGKS+L+N L+ +K ++ + P T+ V Sbjct: 17 DELPLIRCGHVALVGRPNVGKSTLLNQLLGQK-ISIVTRKPQTTRQRILGV------CHR 69 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYL-----SERSTLRCVYLLIDCRHGVKQ 136 + + VD PG R + RYL + + + V L+D R K Sbjct: 70 DGAQIVYVDTPGLHQRR---------DKALNRYLNRTAANALADVDLVVFLVD-RLHFKP 119 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ V L ++ V + + K+D+L + L ++L +P EV+P S++K Sbjct: 120 EDEAVLERLKRRDVPVILAINKVDRL--RDKAQLLPHIQWLSEQHP--FVEVVPLSALKG 175 Query: 197 KGIEVLRKAILETI 210 + + L +AIL + Sbjct: 176 ENLAPLEEAILRQL 189 >gi|51597153|ref|YP_071344.1| GTP-binding protein EngA [Yersinia pseudotuberculosis IP 32953] gi|186896248|ref|YP_001873360.1| GTP-binding protein EngA [Yersinia pseudotuberculosis PB1/+] gi|81825749|sp|Q668A3|DER_YERPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238691441|sp|B2K9P6|DER_YERPB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|51590435|emb|CAH22075.1| putative GTP-binding protein [Yersinia pseudotuberculosis IP 32953] gi|186699274|gb|ACC89903.1| small GTP-binding protein [Yersinia pseudotuberculosis PB1/+] Length = 495 Score = 124 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 76/193 (39%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 197 PEDDFDPRTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------P 249 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 250 MTRDDREYILIDTAGVRKRGKITETVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQD 307 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S I + K D ++ + + +R + S++ G Sbjct: 308 LSLLGFILNSGRSLVIAVNKWDGMTEEARAQVKDMLD--LRLGFVDFARIHFISALHGSG 365 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 366 VGNLFESVQEAYD 378 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 VDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + P TA Y EV ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDPDTATA---------DFYSLGLGEVHAIAASHGRGVTQL 154 >gi|13124242|sp|Q9V288|ENGB_PYRAB RecName: Full=Probable GTP-binding protein EngB Length = 211 Score = 124 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 26/192 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L ++ R PG T+ + ++ N K ++DM Sbjct: 25 IVFVGRSNVGKSTLIYRLTGKR--VRRGKRPGVTRKIIEI---EWKNHK-------IIDM 72 Query: 92 PGYGY-ARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDC-----------RHGVKQID 138 PG+G+ A PK+ + IV ++ + ++ + L++D + G ID Sbjct: 73 PGFGFMAGLPKEVQERIKDEIVHFIEDNASKIDVAVLVVDGKAAPEIIERWEKRGEIPID 132 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + FL + + + + K+DK+ K+ + + IP S+ Sbjct: 133 VEFYQFLRELNIPTVVAVNKLDKIKNVQRVVHFLAEKFEV-PWDEIDKTFIPISAKFGDN 191 Query: 199 IEVLRKAILETI 210 +E L+ I E I Sbjct: 192 VEKLKNRIYEII 203 >gi|22125256|ref|NP_668679.1| GTP-binding protein EngA [Yersinia pestis KIM 10] gi|45442513|ref|NP_994052.1| GTP-binding protein EngA [Yersinia pestis biovar Microtus str. 91001] gi|108808309|ref|YP_652225.1| GTP-binding protein EngA [Yersinia pestis Antiqua] gi|108811426|ref|YP_647193.1| GTP-binding protein EngA [Yersinia pestis Nepal516] gi|145599492|ref|YP_001163568.1| GTP-binding protein EngA [Yersinia pestis Pestoides F] gi|149365335|ref|ZP_01887370.1| putative GTP-binding protein [Yersinia pestis CA88-4125] gi|153948065|ref|YP_001400171.1| GTP-binding protein EngA [Yersinia pseudotuberculosis IP 31758] gi|162419655|ref|YP_001605020.1| GTP-binding protein EngA [Yersinia pestis Angola] gi|165925991|ref|ZP_02221823.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. F1991016] gi|165937070|ref|ZP_02225635.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. IP275] gi|166008076|ref|ZP_02228974.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. E1979001] gi|166212264|ref|ZP_02238299.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. B42003004] gi|167398998|ref|ZP_02304522.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421200|ref|ZP_02312953.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423353|ref|ZP_02315106.1| GTP-binding protein EngA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170023543|ref|YP_001720048.1| GTP-binding protein EngA [Yersinia pseudotuberculosis YPIII] gi|218929935|ref|YP_002347810.1| GTP-binding protein EngA [Yersinia pestis CO92] gi|229838454|ref|ZP_04458613.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895156|ref|ZP_04510332.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Pestoides A] gi|229899021|ref|ZP_04514165.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. India 195] gi|229901683|ref|ZP_04516805.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Nepal516] gi|270489878|ref|ZP_06206952.1| ribosome-associated GTPase EngA [Yersinia pestis KIM D27] gi|294504563|ref|YP_003568625.1| GTP-binding protein EngA [Yersinia pestis Z176003] gi|26006726|sp|Q8ZCT9|DER_YERPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123246587|sp|Q1CK87|DER_YERPN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123372277|sp|Q1C5J2|DER_YERPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225935|sp|A4TMT3|DER_YERPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166920105|sp|A7FFZ3|DER_YERP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238687331|sp|A9R7Z8|DER_YERPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238688573|sp|B1JSA4|DER_YERPY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|21958127|gb|AAM84930.1|AE013738_7 putative GTP-binding factor [Yersinia pestis KIM 10] gi|45437378|gb|AAS62929.1| putative GTP-binding protein [Yersinia pestis biovar Microtus str. 91001] gi|108775074|gb|ABG17593.1| GTP-binding protein [Yersinia pestis Nepal516] gi|108780222|gb|ABG14280.1| putative GTP-binding protein [Yersinia pestis Antiqua] gi|115348546|emb|CAL21486.1| putative GTP-binding protein [Yersinia pestis CO92] gi|145211188|gb|ABP40595.1| GTP-binding protein [Yersinia pestis Pestoides F] gi|149291748|gb|EDM41822.1| putative GTP-binding protein [Yersinia pestis CA88-4125] gi|152959560|gb|ABS47021.1| GTP-binding protein EngA [Yersinia pseudotuberculosis IP 31758] gi|162352470|gb|ABX86418.1| GTP-binding protein EngA [Yersinia pestis Angola] gi|165914933|gb|EDR33545.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. IP275] gi|165922195|gb|EDR39372.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. F1991016] gi|165992458|gb|EDR44759.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. E1979001] gi|166206195|gb|EDR50675.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. B42003004] gi|166960689|gb|EDR56710.1| GTP-binding protein EngA [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051502|gb|EDR62910.1| GTP-binding protein EngA [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057523|gb|EDR67269.1| GTP-binding protein EngA [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750077|gb|ACA67595.1| small GTP-binding protein [Yersinia pseudotuberculosis YPIII] gi|229681612|gb|EEO77706.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Nepal516] gi|229687966|gb|EEO80038.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. India 195] gi|229694820|gb|EEO84867.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701918|gb|EEO89941.1| 50S ribosome associated factor involved in the biogenesis and stability of 50S ribosomal subunits [Yersinia pestis Pestoides A] gi|262362442|gb|ACY59163.1| GTP-binding protein EngA [Yersinia pestis D106004] gi|262366551|gb|ACY63108.1| GTP-binding protein EngA [Yersinia pestis D182038] gi|270338382|gb|EFA49159.1| ribosome-associated GTPase EngA [Yersinia pestis KIM D27] gi|294355022|gb|ADE65363.1| GTP-binding protein EngA [Yersinia pestis Z176003] gi|320016011|gb|ADV99582.1| ferrous iron transport protein B [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 495 Score = 124 bits (313), Expect = 6e-27, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 76/193 (39%), Gaps = 11/193 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P+ P ++A GR NVGKS+L N ++ + + PG T+ + Sbjct: 197 PEDDFDPRTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------P 249 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 250 MTRDDREYILIDTAGVRKRGKITETVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQD 307 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S I + K D ++ + + +R + S++ G Sbjct: 308 LSLLGFILNSGRSLVIAVNKWDGMTEEARAQVKDMLD--LRLGFVDFARIHFISALHGSG 365 Query: 199 IEVLRKAILETIN 211 + L +++ E + Sbjct: 366 VGNLFESVQEAYD 378 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 VDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + P TA Y EV ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDPDTATA---------DFYSLGLGEVHAIAASHGRGVTQL 154 >gi|222055249|ref|YP_002537611.1| small GTP-binding protein [Geobacter sp. FRC-32] gi|254783155|sp|B9M914|DER_GEOSF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|221564538|gb|ACM20510.1| small GTP-binding protein [Geobacter sp. FRC-32] Length = 441 Score = 124 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 68/181 (37%), Gaps = 20/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N LV R+ A + PG T+ N+ F L+ Sbjct: 3 PLIAIVGRPNVGKSTLFNRLVGRRK-AMVDDMPGVTRDRNYADVNRFD------VPFILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P+ + + + + ++D R G+ D +V L + Sbjct: 56 DTGGF----EPETSDRLLQQMREQSQLAMDEADLILFVMDGRDGLTPADVEVVEMLRRVN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V+ KID QE Y ++ S+ +G+ L + ++ Sbjct: 112 KPVFYVVNKID----GDRQEN-----AAGDFYSLGIEQIFTISAEHNRGVNDLMEEVIAA 162 Query: 210 I 210 + Sbjct: 163 L 163 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 66/184 (35%), Gaps = 16/184 (8%) Query: 21 IGLLPKAGPP-------EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 I LP P IA GR NVGKS+L+N L+ + + + PG T+ Sbjct: 160 IAALPNKTAPAVDEEVTRIAVIGRPNVGKSTLVNRLLGVERVV-ANPTPGTTRDSI---- 214 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N L+D G + ++ + +V L V ++ID G Sbjct: 215 --DTYFNCNKKRYLLIDTAGIRRKGKTTEKIEKYS--VVDSLRSIERADVVLIVIDAEEG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + D + + + V+ K D +S A + K + ++ S+ Sbjct: 271 VTEQDTKIAGYAFEAGRGCIFVVNKWDAISKDNASMGIFVEKIRMEFKYLPFAPIVFVSA 330 Query: 194 VKRK 197 + Sbjct: 331 KTGQ 334 >gi|238752471|ref|ZP_04613947.1| GTP-binding protein engA [Yersinia rohdei ATCC 43380] gi|238709320|gb|EEQ01562.1| GTP-binding protein engA [Yersinia rohdei ATCC 43380] Length = 494 Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 11/192 (5%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E P + P ++A GR NVGKS+L N ++ + + PG T+ + + Sbjct: 197 EDDFDPLSLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PM 249 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + L+D G + V+ + +++ L V L+ID R G+ D Sbjct: 250 TRDEREYILIDTAGVRKRGKITEAVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQDL 307 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + F+ S I + K D +S + + +R + S++ G+ Sbjct: 308 SLLGFILNSGRSLVIAVNKWDGMSEEARTQVKDMLD--LRLGFVDFARIHFISALHGSGV 365 Query: 200 EVLRKAILETIN 211 L ++I E + Sbjct: 366 GNLFESIQEAYD 377 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + P TA Y EV ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDPDTATA---------DFYSLGLGEVHAIAASHGRGVTQL 154 >gi|148665633|gb|EDK98049.1| GTP-binding protein 8 (putative), isoform CRA_b [Mus musculus] Length = 243 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 22/187 (11%) Query: 30 PEIAFSGRS-NVGKSSLINILVNRKNLARTSNAP------GRTQHLNFFVPKDFSNLKNN 82 P + GR+ ++ +++ N + + R +AP G T+ +NFF Sbjct: 65 PSLEDIGRAESIFEATARNRIEYLSSAVRLDHAPSLQQPEGHTKKMNFFKVGKH------ 118 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 LVDMPGYGY RAP+ VD ++ YL ER+ L+ +LL+D G+ ++D Sbjct: 119 ---FTLVDMPGYGY-RAPEDFVD----MVETYLKERNNLKRTFLLVDSVVGITKLDNIAI 170 Query: 143 SFLDKKAVSYQIVLTKIDKLSPT-TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ A+ Y ++LTKIDK S ++ L+ K++ P++ P S+V G+ + Sbjct: 171 EMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQKFVNTQTQGCFPQLFPISAVTNSGVHL 230 Query: 202 LRKAILE 208 L+ I + Sbjct: 231 LKCFIAD 237 >gi|238758839|ref|ZP_04620012.1| GTP-binding protein engA [Yersinia aldovae ATCC 35236] gi|238702947|gb|EEP95491.1| GTP-binding protein engA [Yersinia aldovae ATCC 35236] Length = 494 Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + PG T+ + + + Sbjct: 202 PRTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMTRDER 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYILIDTAGVRKRGKITETVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D ++ + + +R + S++ G+ L + Sbjct: 313 ILNSGRSLVIAVNKWDGMTEEARAQVKDMLD--LRLGFVDFARIHFISALHGSGVGNLFE 370 Query: 205 AILETIN 211 +I E + Sbjct: 371 SIQEAYD 377 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + P TA Y +V ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDPDTATA---------DFYSLGLGDVHAIAASHGRGVTQL 154 >gi|160331570|ref|XP_001712492.1| engA [Hemiselmis andersenii] gi|159765940|gb|ABW98167.1| engA [Hemiselmis andersenii] Length = 519 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 16/199 (8%) Query: 20 EIGLLPKAGPP------EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 I LPK P ++A G+ NVGKSS++N L N+K A S+ PG T+ Sbjct: 239 TITHLPKISFPFSETSIKVAIIGKPNVGKSSILNFLTNKKR-AIVSDIPGTTRD----SC 293 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F + +N L+D G + + + + +I R CV +ID G Sbjct: 294 DSFISGGSNSNIYNLIDTAGIRKKKMIEYGPEFF--MINRTFKAIQKCDCVLFVIDASTG 351 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPT 191 + + DQ + + ++ S I+ K DK+S + + +K K LI+ P + +V+ T Sbjct: 352 ITEQDQKLSERIQEQGKSCVIIFNKWDKIS-SKDKLNFQKFKLLIKRMLQPISWADVLFT 410 Query: 192 SSVKRKGIEVLRKAILETI 210 S++ + I I Sbjct: 411 SAINGNSCNKIFDYIDSAI 429 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 65/179 (36%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNR-KNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L+N + ++ + + G T+ N+ Sbjct: 77 IPIVAIVGRGNVGKSTLVNRISGAFEDGSIVHDLEGVTRDKNY------RKAFWCEHQFL 130 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 + D G+ + ++ + + L + ++D + + D ++ ++L Sbjct: 131 VTDTGGFAFEENNSNKFEA--DVKEQALKAIEEANVIIFVVDGKCELDINDIELANYLKF 188 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTSSVKRKGIEVLRKA 205 + + + K E L+K + + E IP S++ +VL Sbjct: 189 QKTPVLLAVNKS---------ENLKKFDSEGSKFWSLGFGEPIPISAIHGTNTDVLLDK 238 >gi|238785325|ref|ZP_04629314.1| GTP-binding protein engA [Yersinia bercovieri ATCC 43970] gi|238713778|gb|EEQ05801.1| GTP-binding protein engA [Yersinia bercovieri ATCC 43970] Length = 494 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + PG T+ + + + Sbjct: 202 PRTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSIYI------PMTRDER 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYVLIDTAGVRKRGKVTETVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D ++ + + +R + S++ G+ L + Sbjct: 313 ILNSGRSLVIAVNKWDGMTEEARAQVKDMLD--LRLGFVDFARIHFISALHGSGVGNLFE 370 Query: 205 AILETIN 211 +I E + Sbjct: 371 SIQEAYD 377 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + P TA Y EV ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDPDTATA---------DFYSLGLGEVHAIAASHGRGVTQL 154 >gi|154343473|ref|XP_001567682.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065014|emb|CAM43126.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 762 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 23/173 (13%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S+ +F + L+ V + LP+ PE+ F G+ GKSSLI+ L++ + L ++ Sbjct: 56 LSNEVFGRGN-RHLKNVETLTSLPEGLHSFPEVCFIGKPGCGKSSLISCLLHNRRLGKSG 114 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPK-----KNVDSWGGLIVRY 114 PG T+ L FF D A+ LVD PGYG R + + ++ RY Sbjct: 115 ATPGTTRLLQFFNVGD---------ALLLVDTPGYGGWRGREVGQRLAEQANAFSILFRY 165 Query: 115 LSER--STLRCVYLLIDCR----HGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 L+ R S L+ VY L++ + D+++ +FL ++ + + +VLTKID+ Sbjct: 166 LALRNGSNLKRVYWLVESSARTPVSFQPRDEELLTFLSRERIPFSVVLTKIDR 218 >gi|304311812|ref|YP_003811410.1| GTP-binding protein [gamma proteobacterium HdN1] gi|301797545|emb|CBL45765.1| GTP-binding protein [gamma proteobacterium HdN1] Length = 474 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 11/178 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR NVGKS+LIN ++ + + + PG T+ + + Sbjct: 173 PEDTGIRIAVVGRPNVGKSTLINRMLGEERVV-VFDMPGTTRDSIYI------PYERRGQ 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L++D R G+ D + F Sbjct: 226 KYTLIDTAGVRKRGRVDEAVEKFS--VIKTLQAIEDAHVVILVLDAREGIVDQDLHLLGF 283 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + S I L K D + K + R + ++ S++ G+ L Sbjct: 284 VLETGRSLLIALNKWDGMDDYQKSRV--KVEIDRRMEFVSFAKIHFISALHGTGVGDL 339 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 21/168 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A ++ PG T+ + + A ++D Sbjct: 5 VALVGRPNVGKSTLFNRLTKTRD-AIVADMPGLTRDRKY------GEARVGAHAFLVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ + ++ V+ ++D + G+ D+ + L + Sbjct: 58 GGITGEEEGIDSLMAEQSML-----AIEEADLVFFIVDAKAGLTAGDEVLAQRLRVREKP 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ KID + E L + L + S+ +G+ Sbjct: 113 LYVVVNKID---GQDSDEALAEFSRL------GLGDPFFISASHGRGV 151 >gi|256828007|ref|YP_003156735.1| small GTP-binding protein [Desulfomicrobium baculatum DSM 4028] gi|256577183|gb|ACU88319.1| small GTP-binding protein [Desulfomicrobium baculatum DSM 4028] Length = 445 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 77/187 (41%), Gaps = 19/187 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G +IA GR N GKSS IN L+ +K L S G T+ ++ Sbjct: 177 PQGGL-KIALLGRPNAGKSSTINALLGKKRLM-VSAEAGTTRDCV------DVTVQRGGK 228 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G +++ + +V + V L++D GV D+ + SF Sbjct: 229 TYTFVDTAGVRRKSKVIDSLEYFS--VVHSMQAAKQADVVVLVLDIMDGVVGQDKRLLSF 286 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG------ 198 LD + V + IV+ KID LS +T + AH V+ +SSV G Sbjct: 287 LDTEKVPFVIVVNKIDLLSKDQLAKTKKDLVDQFA--FCAHVPVLYSSSVSMAGLGGLLP 344 Query: 199 -IEVLRK 204 IE L + Sbjct: 345 LIEKLWE 351 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 20/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L N L+ ++ ++ T + G T+ F S ++ Sbjct: 4 HLPMVALIGRPNVGKSTLFNRLI-KRRVSITHDMAGVTRDSIF------SEVRGETRTYM 56 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G P + + + + + + ++D R G+ D+ V +L + Sbjct: 57 LIDTGGL----VPDSSDEIEISIFDQAREAMAGADLILFIVDGRTGLHPQDEQVGQYLRQ 112 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 ++++ K+D +ETL ++ + + S+ G+ LR+ I Sbjct: 113 SGKEVRVLVNKVD---GPEQEETLAA------DFYSLGFPLQCVSASHGFGMGDLREMIE 163 Query: 208 ETI 210 + Sbjct: 164 TAL 166 >gi|323697490|ref|ZP_08109402.1| ribosome-associated GTPase EngA [Desulfovibrio sp. ND132] gi|323457422|gb|EGB13287.1| ribosome-associated GTPase EngA [Desulfovibrio desulfuricans ND132] Length = 505 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 11/169 (6%) Query: 35 SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGY 94 GR N GKSS+IN L+ + L S+ G T+ + VD G Sbjct: 191 LGRPNAGKSSIINALIGKDRL-IVSDVAGTTRDSI------DVTFEKGGKRYTFVDTAGV 243 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 + +++ ++R L L ID GV + D+ + FL K+ + + Sbjct: 244 RKRANIQDHLEKIS--VIRALKNSKRSDVTVLTIDITLGVGRQDKRLIEFLAKEKTPFMV 301 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 V+ K D + + LE + +R P H V+ TS+VK GI L Sbjct: 302 VVNKADLIPRSETNRALEAFREELRLVP--HVPVVMTSAVKGLGIGKLL 348 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 69/180 (38%), Gaps = 18/180 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L+ RK+ + T + PG T+ + L Sbjct: 2 LPIVALVGRPNVGKSTLFNRLL-RKSRSITHDLPGVTRDRIY------GECIMGETRFDL 54 Query: 89 VDMPGYGYARA--PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G P+ + D + + + + ++D + G+ +D+ F+ Sbjct: 55 VDTGGMVLESEATPELSKDFEDEIFEQAQEAINEANAIVFVVDGKEGLTPLDRQAAEFVR 114 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +++ K+D + + + + E +P S+ + +R + Sbjct: 115 RSGKPVLMLINKVD---GSEFEAHMTA------EFHELGIEFLPVSAAHGYNLHEVRDRV 165 >gi|332225397|ref|XP_003261866.1| PREDICTED: GTP-binding protein 8-like isoform 2 [Nomascus leucogenys] Length = 251 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 22/186 (11%) Query: 30 PEIAFSGRS-NVGKSSLINILVNRKNLARTSNAP------GRTQHLNFFVPKDFSNLKNN 82 P + R+ NV ++ N + + R +AP G T+ +NFF Sbjct: 73 PSLEDIARADNVFTATERNRIDYVSSAVRIDHAPDLPRPEGHTKKMNFFKVGKH------ 126 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +VDMPGYGY RAP+ VD ++ YL ER L+ +LL+D G+++ D Sbjct: 127 ---FTVVDMPGYGY-RAPEDFVD----MVETYLKERRNLKRTFLLVDSVVGIQKTDNIAI 178 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ A+ Y IVLTKIDK S ++ L+ K++ P++ P S+V GI + Sbjct: 179 EMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNTKTQGCFPQLFPVSAVAFSGIHL 238 Query: 202 LRKAIL 207 LR I Sbjct: 239 LRCFIA 244 >gi|160872137|ref|ZP_02062269.1| GTP-binding protein EngA [Rickettsiella grylli] gi|159120936|gb|EDP46274.1| GTP-binding protein EngA [Rickettsiella grylli] Length = 455 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 75/179 (41%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ NVGKS+L+N ++ + + + PG T+ ++++ +D Sbjct: 199 KVAIVGKPNVGKSTLLNRILGEERV-IVFDQPGTTRDSI------ANDIEYRGQHYIFID 251 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + +D + +++ L V LLID + G+ + D + F+ + Sbjct: 252 TAGIRRKSKTWEAIDKFS--VIKSLQAIEASHVVLLLIDAQEGISEQDLHLLGFILESGK 309 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + I + K D LS + + ++ + +VI S++ G+ L I + Sbjct: 310 AVIIAVNKWDGLSKDQRDQIKKDLDRRLQ--FISFAQVIFISALHGTGVGHLFTLIRQA 366 Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 66/181 (36%), Gaps = 18/181 (9%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 + P I GR NVGKSSL N L + A + PG T+ + Sbjct: 12 SSLPSIVLVGRPNVGKSSLFNRLT-KTRQALVGDIPGLTRDRLY------GRGIVGNRPF 64 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + + + + + V L+D R G+ +DQ + L Sbjct: 65 IVIDTGGLTGCK----EKNIAFQMEQQARNAIKEADHVLFLVDAREGLSLLDQQLIQQLR 120 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K L ++++ + T+ +I S++ G++ L + + Sbjct: 121 PFNKKITLVINKS-----EGLDAALLQSEFSPLGFRTSSLSII--SAIHGYGLQTLMEKV 173 Query: 207 L 207 Sbjct: 174 F 174 >gi|225181110|ref|ZP_03734557.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1] gi|225168307|gb|EEG77111.1| small GTP-binding protein [Dethiobacter alkaliphilus AHT 1] Length = 440 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 17/183 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N L + + S+ PG T+ ++ + VD Sbjct: 176 VAIIGRPNVGKSSLTNKLSGTERV-IVSDMPGTTRDAI------DLLIERDNRKYLFVDT 228 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + L R + + V +LID GV + D+ + + + Sbjct: 229 AGIRRKSKVDEAVEYYSVL--RSIRAAESADVVLMLIDAAEGVTEQDKRIAGIAHEAGRA 286 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAILET 209 IV+ K DK+ +T++ + +R+ + ++ S++ + + + + E Sbjct: 287 LVIVVNKWDKVEKDD--KTMDAYRDNLRDELAYITYAPILFISALTGQRV----QRVYEL 340 Query: 210 INY 212 I+Y Sbjct: 341 IDY 343 Score = 91.4 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 64/182 (35%), Gaps = 25/182 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L+ ++ LA G T+ + D++ + L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNRLI-QRRLAIEEPTAGVTRDRI-YGRADWTGHE-----FWLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G + D I R + + ++D R G +D +V + L K Sbjct: 57 DTGGLTF------EEDKISREIHRQVKLAMEEANVIIFVVDVRSGPVTLDYEVAAMLRKT 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + K + SP + Y E TS G L + + Sbjct: 111 TKPVILAANKAE--SPN---------FDMSEFYALGLGEPTLTSGAHGLGTGDLLDEVAK 159 Query: 209 TI 210 + Sbjct: 160 HL 161 >gi|197285696|ref|YP_002151568.1| GTP-binding protein EngA [Proteus mirabilis HI4320] gi|238693198|sp|B4EZS9|DER_PROMH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|194683183|emb|CAR43820.1| GTP-binding protein [Proteus mirabilis HI4320] Length = 496 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 75/188 (39%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 201 DFDPTTLPVKLAIVGRPNVGKSTLTNRMLGEERVV-VYDMPGTTRDSIYI------PMER 253 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G K+ V+ + +++ L L+ID R G+ D + Sbjct: 254 DGKEYILIDTAGVRKRGKVKETVEKFS--VIKTLQAIEDCNVALLVIDAREGISDQDLSL 311 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ S I + K D ++ ++ + ++ V S++ G+ Sbjct: 312 LGYILNSGRSLVIAVNKWDGMTQEDREQVKDMLD--LKLGFVDFARVHFISALHGSGVGN 369 Query: 202 LRKAILET 209 L ++I E Sbjct: 370 LFESIQEA 377 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 24/182 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAELDGEEFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G A + + + L V L+D R G+ DQ + L Sbjct: 55 IDTGGIDGAEEGVET-----HMASQSLQAIQEADIVLFLVDARAGLMPADQGIAKHLRGV 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K D + TA L Y E+ P ++ +G+ L I + Sbjct: 110 EKKTYLVANKTDGIDIDTA---------LADFYSLGLGEIFPIAASHGRGVSQL---IEQ 157 Query: 209 TI 210 + Sbjct: 158 AL 159 >gi|13124176|sp|O57939|ENGB_PYRHO RecName: Full=Probable GTP-binding protein EngB Length = 216 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 31/221 (14%) Query: 3 SHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 + +IF + F+ P I L+P A I F+GRSNVGKS+LI L +K R P Sbjct: 6 ADSIFFFLPYEFI--NPIILLIPMAT---IIFAGRSNVGKSTLIYRLTGKK--VRRGKRP 58 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA-PKKNVDSWGGLIVRYLS-ERST 120 G T+ + ++ N K ++DMPG+G+ PK+ + IV ++ Sbjct: 59 GVTRKIIEI---EWKNHK-------IIDMPGFGFMMGLPKEVQERIKDEIVHFIEDNAKN 108 Query: 121 LRCVYLLIDC-----------RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 + L++D + G ID + + FL + + + + K+DK+ Sbjct: 109 IDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDIPTIVAVNKLDKIKNVQEVI 168 Query: 170 TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 K+ + IP S+ IE L+ I E I Sbjct: 169 NFLAEKFEV-PLSEIDKVFIPISAKFGDNIERLKNRIFEVI 208 >gi|94267274|ref|ZP_01290827.1| Small GTP-binding protein domain:GTP-binding [delta proteobacterium MLMS-1] gi|93452066|gb|EAT02754.1| Small GTP-binding protein domain:GTP-binding [delta proteobacterium MLMS-1] Length = 453 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 9/178 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +AF GR NVGKSSLIN L+ + + S PG T+ S L Sbjct: 185 QPQPVRVAFIGRPNVGKSSLINRLLGSERMV-VSEVPGTTRDSV------DSLLIRGEKQ 237 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G +++V+ + + R L+ L+ID G+ + D V + Sbjct: 238 YRLIDTAGIRRKGKVRESVEKFSVM--RALAALERCDLALLVIDAAEGITEQDTKVIGYG 295 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + ++L K D L Q+ + + + V S++ G+ L Sbjct: 296 LERGRACLVLLNKWDLLKDDRRQQKRLLAEVERAVHFVGYAPVHKLSALSGSGVGRLL 353 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 71/187 (37%), Gaps = 19/187 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A GR NVGKSSL N + + A PG T+ + + + N Sbjct: 4 PQPLPLVALVGRPNVGKSSLFNRIAGGRK-AIVDPTPGVTRD------RHYQQVSWNQRH 56 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G ++ + + LI + + + LL+D R GV D V Sbjct: 57 FMLIDTGGIEGDKSSEVPI---NRLIGEQSRQAVAEADVILLLLDARQGVTPDDYQVVEI 113 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + ++ KID +P + L Y P++ P S+ G+ L Sbjct: 114 LRRSGKPVHYLVNKID--APEQVDKLLPTF------YELGVPQLWPLSASHGLGLAELLD 165 Query: 205 AILETIN 211 A++ + Sbjct: 166 AVVAELG 172 >gi|297568834|ref|YP_003690178.1| ribosome-associated GTPase EngA [Desulfurivibrio alkaliphilus AHT2] gi|296924749|gb|ADH85559.1| ribosome-associated GTPase EngA [Desulfurivibrio alkaliphilus AHT2] Length = 487 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 13/179 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +AF GR NVGKSSLIN L+ + + SN PG T+ + L L+D Sbjct: 229 VAFIGRPNVGKSSLINRLLGEERMV-VSNLPGTTRDSV------DTLLTRADKKYLLIDT 281 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + L R L ++ID GV + D V + ++ + Sbjct: 282 AGIRRKGKVHEKVEKFSVL--RALRTLERCDLALIVIDALEGVTEQDTKVLGYGLERGRA 339 Query: 152 YQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++L K D + Q LE K + + + V S++ G+ L I + Sbjct: 340 CLVLLNKWDLIEHDRKQQQRLLEDVKRAV--HFAGYAPVHRVSALTGHGLGKLFPLIDK 396 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 67/182 (36%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKSSL N L + A PG T+ + + + N L Sbjct: 49 LPLVALVGRPNVGKSSLFNRLAGSRK-AIVDPTPGVTRD------RHYEKITWNDRRFIL 101 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + N + + V L+D R G+ DQ+V L + Sbjct: 102 VDTGGLESDTTTEINRLIQ----EQTSQAVAEADVVLFLLDGREGILPDDQEVVEILRRS 157 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ KID +P A + L Y E+ P S+ +GI L + Sbjct: 158 GKKVFYLINKID--APEQAAKLLPTF------YELGVEELWPVSAEHGQGIGDLLDRVAA 209 Query: 209 TI 210 + Sbjct: 210 EL 211 >gi|227356207|ref|ZP_03840596.1| GTP-binding protein [Proteus mirabilis ATCC 29906] gi|227163671|gb|EEI48587.1| GTP-binding protein [Proteus mirabilis ATCC 29906] Length = 501 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 75/188 (39%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 206 DFDPTTLPVKLAIVGRPNVGKSTLTNRMLGEERVV-VYDMPGTTRDSIYI------PMER 258 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G K+ V+ + +++ L L+ID R G+ D + Sbjct: 259 DGKEYILIDTAGVRKRGKVKETVEKFS--VIKTLQAIEDCNVALLVIDAREGISDQDLSL 316 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ S I + K D ++ ++ + ++ V S++ G+ Sbjct: 317 LGYILNSGRSLVIAVNKWDGMTQEDREQVKDMLD--LKLGFVDFARVHFISALHGSGVGN 374 Query: 202 LRKAILET 209 L ++I E Sbjct: 375 LFESIQEA 382 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 24/182 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 7 IPVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAELDGEEFII 59 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G A + + + L V L+D R G+ DQ + L Sbjct: 60 IDTGGIDGAEEGVET-----HMASQSLQAIQEADIVLFLVDARAGLMPADQGIAKHLRGV 114 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K D + TA L Y E+ P ++ +G+ L I + Sbjct: 115 EKKTYLVANKTDGIDIDTA---------LADFYSLGLGEIFPIAASHGRGVSQL---IEQ 162 Query: 209 TI 210 + Sbjct: 163 AL 164 >gi|194222846|ref|XP_001503003.2| PREDICTED: similar to GTP-binding protein 8 [Equus caballus] Length = 258 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 49/210 (23%) Query: 3 SHTIFTKSAW---IFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 + +IFT +A +L + P PE Sbjct: 81 AESIFTATAQNRIEYLSSAERLDHAPALPRPE---------------------------- 112 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 G T+ +NFF + LVDMPGYGY RAP+ VD ++ YL ER Sbjct: 113 ---GHTKKMNFFKVGKY---------FTLVDMPGYGY-RAPEDFVD----MVETYLKERK 155 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLI 178 L +LL+D G+++ D ++ A+ Y +VLTKIDK S ++ L+ K++ Sbjct: 156 NLMRTFLLVDSVVGIQKTDNIAVEMCEEFALPYVMVLTKIDKSSKGHLLKQVLQIQKFVD 215 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 P++ P S+V GI +LR I + Sbjct: 216 TKTQGCFPQLFPVSAVTYSGIHLLRCFIAD 245 >gi|238763554|ref|ZP_04624515.1| GTP-binding protein engA [Yersinia kristensenii ATCC 33638] gi|238698186|gb|EEP90942.1| GTP-binding protein engA [Yersinia kristensenii ATCC 33638] Length = 494 Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P ++A GR NVGKS+L N ++ + + PG T+ + + + Sbjct: 202 PRTLPIKLAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSIYI------PMTRDER 254 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V L+ID R G+ D + F Sbjct: 255 EYILIDTAGVRKRGKITETVEKFS--VIKTLQAIEDSNVVLLVIDARDGISDQDLSLLGF 312 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D ++ + + +R + S++ G+ L + Sbjct: 313 ILNSGRSLVIAVNKWDGMTEEARAQVKDMLD--LRLGFVDFARIHFISALHGSGVGNLFE 370 Query: 205 AILETIN 211 +I E + Sbjct: 371 SIQEAYD 377 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTHTRD-ALVADFPGLTRDRKY------GRAEVEGHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ DQ + L + Sbjct: 55 IDTGGI---DGTEDGVET--KMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K D + TA Y EV ++ +G+ L Sbjct: 110 EKATFLVANKTDGIDADTAAA---------DFYSLGLGEVHAIAASHGRGVTQL 154 >gi|300869581|ref|ZP_07114162.1| GTP-binding protein engA [Oscillatoria sp. PCC 6506] gi|300332449|emb|CBN59362.1| GTP-binding protein engA [Oscillatoria sp. PCC 6506] Length = 454 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 13/193 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P +G LP+ ++A GR NVGKSSL+N + A S G T+ + Sbjct: 166 PAVGELPEIEETKVAIVGRPNVGKSSLLNAFLGETR-AIVSPISGTTRDAI------DTV 218 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ N L+D G + + + +G I R V L+ID GV D Sbjct: 219 VERNGTTYRLIDTAGIRKKKNVEYGPEFFG--INRAFKAIRRADVVLLVIDAVDGVTDQD 276 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 Q + + ++ + IV+ K D + + + + R Y E+I S+ + Sbjct: 277 QKLADRISEEGRACVIVVNKWDAIEKDSTTIYDYEKEVKTRLYFVDWAEMIFVSATTGQR 336 Query: 199 IEVLRKAILETIN 211 +E ILE ++ Sbjct: 337 VEK----ILELVD 345 Score = 91.4 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+++N ++ + + PG T+ + + N + Sbjct: 3 LPIVAIIGRPNVGKSTIVNRFAESQD-SIVHDQPGMTRD------RTYKNAYWGDREFQV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + N + + + ++ + ++D + G+ D+ + +L ++ Sbjct: 56 VDTGGLVF----DDNTEFLPLIREQAMAALAEASAAIFVVDGQIGLTGGDEAIAEWLRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + E + + E P S + G L ++ Sbjct: 112 RVPVLLAVNKC--------ESETEGLTQAAQFWELGLGEPFPISGIHGNGTGELLDELIS 163 Query: 209 TI 210 + Sbjct: 164 HL 165 >gi|148546131|ref|YP_001266233.1| GTP-binding protein EngA [Pseudomonas putida F1] gi|166225843|sp|A5VYT9|DER_PSEP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|148510189|gb|ABQ77049.1| small GTP-binding protein [Pseudomonas putida F1] Length = 487 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + PG T+ + + + Sbjct: 189 EKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDEPGTTRDSIYI------PFERDGDK 241 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 242 YTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + P KT+ R + ++ S++ G+ L Sbjct: 300 LEAGRAIVIALNKWDGMEPGERAYV--KTELERRLFFVDFADIHFISALHGTGVGNL 354 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + + + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRDRQY------GDASWQGRSFIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G V + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI-----TGDEVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V KID + P A+ P IP + + +GI L +A+L Sbjct: 110 NKAAILVANKIDNIDPDVARAEFS---------PMGMGNAIPVAGSQGRGISALMEAVL 159 >gi|319789668|ref|YP_004151301.1| ribosome-associated GTPase EngA [Thermovibrio ammonificans HB-1] gi|317114170|gb|ADU96660.1| ribosome-associated GTPase EngA [Thermovibrio ammonificans HB-1] Length = 479 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKSSL N L+ RK +A N PG T+ + + + Sbjct: 4 LPVVAIVGRPNVGKSSLFNRLLGRK-VAIIDNTPGVTRDRVVQEADIDEHKVVLVDTGGV 62 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 V+ + +A+ + + ++D + G+ +D++V L + Sbjct: 63 VEKDAHEFAKETTEQAK----------RAMEEADVIVFVVDGQEGINPLDEEVAKLLRRW 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + KID + +E Y Y EVIP S++ + GI L++ ILE Sbjct: 113 KKPVIVAVNKID-------EPFMEDLVY--DFYRLGFDEVIPISTIHKIGIPTLKEKILE 163 Query: 209 TI 210 + Sbjct: 164 KL 165 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR N+GKS+L+N LV + A S+ PG T+ + ++ Sbjct: 221 PIKVAIVGRPNMGKSTLLNALVGEER-AIVSDIPGTTRDAI------DTYVRVGDDEFIF 273 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G K ++ + L R L V L++D + G + D + +K Sbjct: 274 IDTAGIRRRGKIKD-IEYYSYL--RSLDAIDRADVVVLMVDAQEGPTERDAKIAGMALEK 330 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 I + KID L E L++ L+ ++ P V S+ +RKG++ L K I + Sbjct: 331 FKPIVIAVNKIDTLKDQKEWERLQRELDLVFDFIPFAPRVF-ISAKERKGLKELLKQIKD 389 Query: 209 T 209 Sbjct: 390 L 390 >gi|307152641|ref|YP_003888025.1| ribosome-associated GTPase EngA [Cyanothece sp. PCC 7822] gi|306982869|gb|ADN14750.1| ribosome-associated GTPase EngA [Cyanothece sp. PCC 7822] Length = 452 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 81/197 (41%), Gaps = 13/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + +P G +P+ ++A GR NVGKSSL+N ++ A S G T+ Sbjct: 162 ITYLPLSGEVPENDEIKVAIVGRPNVGKSSLLNAFTGQQR-AIVSPISGTTRDTI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ N L+D G + + + +G I R V ++D G+ Sbjct: 216 -DTIIERNGQHYRLIDTAGIRRKKNVEYGAEFFG--INRAFKAIRRSDVVLFVVDALDGI 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTS 192 D + + + + +V+ K D + + T+ + + ++ R Y E+I S Sbjct: 273 TDQDLKLAGRIIDEGRATILVVNKWDAVEKDSY--TIYEYQKILGSRLYFMDWAEMIFVS 330 Query: 193 SVKRKGIEVLRKAILET 209 ++ + +E + + + Sbjct: 331 ALTGQRVEKILDLVDQA 347 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A + PG T+ + + + Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGDQQ-AIVHDEPGITRD------RTYRPAFWQDRDFQV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + ++ + ++D + G DQ++ +L + Sbjct: 56 VDTGGLVF----DDDTEFLPLIREQAMAALTEANAAIFVVDGQSGPTAGDQEIADWLRSQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V + + K + + Q + + + E P S++ G L ++ Sbjct: 112 SVPVLLAVNKCESVEQGIIQAS--------QFWELGLGEPYPISAIHGNGTGDLLDQLIT 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|307243689|ref|ZP_07525829.1| GTP-binding protein Era [Peptostreptococcus stomatis DSM 17678] gi|306492898|gb|EFM64911.1| GTP-binding protein Era [Peptostreptococcus stomatis DSM 17678] Length = 300 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 22/183 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N +V K +A S+ P T++ V D + + +D Sbjct: 8 VSIVGRPNVGKSTLMNNMVGEK-IAIMSDKPQTTRNTIQAVYTD------DQAQIVFLDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + G ++V+ E + C+ ++D + + D + L K V Sbjct: 61 PGIHKP------KNKLGQMMVKSAEESFKNVDCILFVVDDSDKIGKGDSMIIENLRKAKV 114 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+DK+ E+ LI+ Y E+IP S++K ++ L KAI + Sbjct: 115 PVFLVINKVDKI------ANKEEIFDLIKMYDQEGLFKEIIPVSALKGSNVDSLIKAIKQ 168 Query: 209 TIN 211 T++ Sbjct: 169 TLD 171 >gi|296226264|ref|XP_002758874.1| PREDICTED: GTP-binding protein 8-like [Callithrix jacchus] Length = 254 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 22/186 (11%) Query: 30 PEIAFSGRS-NVGKSSLINILVNRKNLARTSNAP------GRTQHLNFFVPKDFSNLKNN 82 P + R+ +V K++ N + + R +AP G T+ +NFF Sbjct: 73 PSLEDIARAESVFKATERNRIDYVSSAIRKDHAPDLPRPEGHTKKMNFFKVGKH------ 126 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +VDMPGYGY + + ++ YL ERS LR +LL+D G+++ D Sbjct: 127 ---FTVVDMPGYGYRAP-----EDFADMVETYLKERSNLRRTFLLVDSVVGIQKTDNIAI 178 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ A+ Y IVLTKIDK S ++ LE KY+ P++ S+V GI + Sbjct: 179 EMCEEFALPYVIVLTKIDKSSKGHLLKQVLEIQKYVNTKTQGCFPQLFAVSTVTFSGIHL 238 Query: 202 LRKAIL 207 LR I Sbjct: 239 LRCFIA 244 >gi|322421095|ref|YP_004200318.1| ribosome-associated GTPase EngA [Geobacter sp. M18] gi|320127482|gb|ADW15042.1| ribosome-associated GTPase EngA [Geobacter sp. M18] Length = 440 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 20/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N LV R+ A + PG T+ N+ F LV Sbjct: 3 PIIAIVGRPNVGKSTLFNRLVGRRK-AMVDDMPGVTRDRNYAEVTRFDL------PFILV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P+ + + + + ++D R G+ D+DV L + Sbjct: 56 DTGGF----EPETSDKLLQQMREQSRFAMDEADLILFVMDARDGLTPADRDVVDMLRRIN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 ++ K+D QE Y ++ S+ +G+ L +L Sbjct: 112 KPVFYIINKVD----GEKQEA-----NSGDFYSLGVDQIHTISAEHNRGVGDLMDEVLAA 162 Query: 210 INY 212 + Y Sbjct: 163 LPY 165 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 13/168 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + G T+ + N L+D Sbjct: 178 IAVVGRPNVGKSTLVNRLLGYERVV-ANPTAGTTRDAV------DTRFTVNKKPYLLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + + L V ++++ GV + D + + + Sbjct: 231 AGIRRKGKTVQKVEKYSVM--DALRSIERADVVLIVLNAEEGVTEQDTKIAGYAYEAGRG 288 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRK 197 V+ K D + T+ K IR P ++ S+ + Sbjct: 289 CIFVVNKWDTVQKD--NSTIGKFTEEIRRNFKYLPFAPILFISAETGQ 334 >gi|104780244|ref|YP_606742.1| GTP-binding protein EngA [Pseudomonas entomophila L48] gi|166225841|sp|Q1IEH7|DER_PSEE4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|95109231|emb|CAK13928.1| GTP-binding protein EngA [Pseudomonas entomophila L48] Length = 488 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 70/185 (37%), Gaps = 11/185 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 I + +IA GR NVGKS+L+N ++ + + + PG T+ + Sbjct: 181 ATRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDQPGTTRDSIYI------ 233 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + +D G + V+ + +V+ L V ++D R GV Sbjct: 234 PFERDGEKYTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDH 291 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D ++ F + I L K D + P KT+ R + ++ S++ Sbjct: 292 DLNLLGFALDAGRAVVIALNKWDGMEPGERDYV--KTELERRLFFVDFADIHFISALHGT 349 Query: 198 GIEVL 202 G+ L Sbjct: 350 GVGHL 354 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 67/182 (36%), Gaps = 21/182 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + + + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRDRQY------GDASWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G V + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI-----TGDEVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V KID + A+ P IP + + +GI L +A+L Sbjct: 110 NKEAILVANKIDNIDADVARAEFS---------PLGMGNAIPVAGSQGRGINALMEAVLG 160 Query: 209 TI 210 I Sbjct: 161 HI 162 >gi|313680391|ref|YP_004058130.1| ribosome-associated GTPase enga [Oceanithermus profundus DSM 14977] gi|313153106|gb|ADR36957.1| ribosome-associated GTPase EngA [Oceanithermus profundus DSM 14977] Length = 433 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 22/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL N L+ R++ A ++ G T+ L V + LVD Sbjct: 3 KVVIVGRPNVGKSSLYNRLLGRRD-AVVADEAGVTRDLKEAVV------ETERGKFKLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G A + + + R L+E V L+D R + Q D +V +L +K Sbjct: 56 TGGLWSGDAWEPKIK---EKVDRALAE---ADLVLFLVDGRAELAQADYEVADYLRRKNK 109 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++V TK+D + YL Y + IPTS R+G+E L AI + Sbjct: 110 PVRLVATKVD---------HPKHEAYLGELYALGFGDPIPTSVEHRRGLEELEDAIWAAL 160 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 14/174 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR N GKSSL+N ++ + S+ PG T+ L L Sbjct: 173 PIRIAIIGRPNAGKSSLLNAILGEDRV-IVSDQPGTTRDSI------DVELDYGGTRFVL 225 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + P+ V+ + I R L +D + + + + Sbjct: 226 VDTAGIR--KRPETAVEHFA--IQRAHRVIQEADVAVLAVDPF-ELGDRELKMANEALDA 280 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +TK D + E + + + + H ++ TS+ + I + Sbjct: 281 GKPVILAVTKWDAVPKEERPEVRRQIREKLAHL--EHLPIVYTSAATGQNIHKI 332 >gi|289677942|ref|ZP_06498832.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae FF5] Length = 391 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISALHGTGVGNL 357 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGAHGRGISQMLEI 157 >gi|94495668|ref|ZP_01302248.1| Small GTP-binding protein domain [Sphingomonas sp. SKA58] gi|94425056|gb|EAT10077.1| Small GTP-binding protein domain [Sphingomonas sp. SKA58] Length = 456 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 68/186 (36%), Gaps = 26/186 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N LV +K LA + PG T+ + Sbjct: 2 LPTVAIVGRPNVGKSTLFNRLVGKK-LALVDDQPGVTRDRR------EGEAHLLGLDFTI 54 Query: 89 VDMPGYG---YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D GY P + + L+D R G+ +D+++ +L Sbjct: 55 IDTAGYEDEDPQSLPGRMRIQTEAAVD-------NCDVALFLVDARAGITPLDEEIARWL 107 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V K E ++ + E IP S+ +G+ L +A Sbjct: 108 REGDAPVVLVANKA---------EGRASEGGVMEAFGLGLGEPIPFSAEHGQGMADLFQA 158 Query: 206 ILETIN 211 +L ++ Sbjct: 159 LLPHLD 164 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 76/186 (40%), Gaps = 8/186 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR N GKS+LIN L+ L T G T+ + V +++ + Sbjct: 182 ENAPLKLAIVGRPNAGKSTLINRLLGENRL-LTGPEAGITRD-SIAVDWSWTSREGLERP 239 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G + ++ + L+ + V LL+D G++ D + + Sbjct: 240 VRLIDTAGMRKRAKVQDKLEKLA--VSDGLNAVNFAEVVVLLLDSTRGLEAQDLRIADKV 297 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLR 203 ++ + I L K D + +A + K + + ++ S+ KG++ L Sbjct: 298 LEEGRALVIALNKWDTVDNGSA--LYQGIKQALSDGLAQVRGVPIMTVSAATGKGLDDLI 355 Query: 204 KAILET 209 ET Sbjct: 356 HVAFET 361 >gi|26987593|ref|NP_743018.1| GTP-binding protein EngA [Pseudomonas putida KT2440] gi|37999649|sp|Q88PJ3|DER_PSEPK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|24982270|gb|AAN66482.1|AE016277_1 GTP-binding protein EngA [Pseudomonas putida KT2440] Length = 487 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + PG T+ + + + Sbjct: 189 EKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDEPGTTRDSIYI------PFERDGEK 241 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 242 YTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + P KT+ R + ++ S++ G+ L Sbjct: 300 LEAGRAIVIALNKWDGMEPGERAYV--KTELERRLFFVDFADIHFISALHGTGVGNL 354 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + + + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRDRQY------GDASWQGRSFIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G V + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI-----TGDEVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V KID + P A+ P IP + + +GI L +A+L Sbjct: 110 NKAAILVANKIDNIDPDVARAEFS---------PMGMGNAIPVAGSQGRGINALMEAVL 159 >gi|313497226|gb|ADR58592.1| EngA [Pseudomonas putida BIRD-1] Length = 487 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + PG T+ + + + Sbjct: 189 EKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDEPGTTRDSIYI------PFERDGEK 241 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 242 YTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + P KT+ R + ++ S++ G+ L Sbjct: 300 LEAGRAIVIALNKWDGMEPGERAYV--KTELERRLFFVDFADIHFISALHGTGVGNL 354 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + + + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRDRQY------GDASWQGRSFIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G V + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI-----TGDEVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V KID + P A+ P IP + + +GI L +A+L Sbjct: 110 NKAAILVANKIDNIDPDVARAEFS---------PMGMGNAIPVAGSQGRGINALMEAVL 159 >gi|121535817|ref|ZP_01667617.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] gi|121305589|gb|EAX46531.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] Length = 440 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 12/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++AF GR NVGKSSL+N L+ + + S+ PG T+ + + + Sbjct: 173 DDDVIKVAFIGRPNVGKSSLVNALLGEERV-IVSDIPGTTRDAI------DTYFEKDGTK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + ++R L V ++ID GV + D+ + + Sbjct: 226 FILIDTAGMRRKARINQPVERYS--VIRSLRAVERADVVLVVIDAVDGVTEQDKKIAGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR---KGIEVL 202 + IV+ K D + + + V+ TS++ + + I L Sbjct: 284 HEAGRGIIIVVNKWDLIEKDSKTALRYTENIRSEMAFIQYAPVLFTSALTKQRVQRISEL 343 Query: 203 RKAILE 208 K + E Sbjct: 344 VKFVAE 349 Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 64/184 (34%), Gaps = 26/184 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + +K ++ + PG T+ + + + ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNFIA-KKRVSIVEDLPGVTRDRIY------MDAEWLGREFTMI 56 Query: 90 DMPGYGYA---RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G R I + ++D + G+ D++V + L Sbjct: 57 DTGGIEIETTDRILAATRHQAQLAIEE-------ADVIIFVVDGKTGITTADEEVAAMLR 109 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + KID SP E Y + I S+ I L + Sbjct: 110 STRKPVVLAVNKID--SPKDEPAVYE-------FYNLGLGDPIAISATNALSIGDLLDRV 160 Query: 207 LETI 210 +E + Sbjct: 161 IELL 164 >gi|251792908|ref|YP_003007634.1| GTP-binding protein EngA [Aggregatibacter aphrophilus NJ8700] gi|247534301|gb|ACS97547.1| GTP-binding protein EngA [Aggregatibacter aphrophilus NJ8700] Length = 509 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 70/188 (37%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 +P + +IA GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 213 EQIPDSQNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMER 265 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L ID R + D + Sbjct: 266 DGQQYTLIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSL 323 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D L+ + + V S++ G+ Sbjct: 324 LGFILNAGRSLVIVVNKWDGLNQEVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGN 381 Query: 202 LRKAILET 209 L +++ E Sbjct: 382 LFESVKEA 389 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 72/179 (40%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHLAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADIVLFLVDARAGLTSADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K+D + + + Y E+ ++ + +GI L + +L Sbjct: 112 NKTTVVVANKVDGIDADS---------HCAEFYQLGLGEIAQIAASQGRGIANLMEQVL 161 >gi|330975909|gb|EGH75975.1| GTP-binding protein Der [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 490 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISALHGTGVGNL 357 Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGAHGRGISQMLEI 157 >gi|302185741|ref|ZP_07262414.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae 642] gi|330950783|gb|EGH51043.1| GTP-binding protein Der [Pseudomonas syringae Cit 7] Length = 490 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISALHGTGVGNL 357 Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGAHGRGISQMLEI 157 >gi|237751796|ref|ZP_04582276.1| GTP-binding protein [Helicobacter bilis ATCC 43879] gi|229373162|gb|EEO23553.1| GTP-binding protein [Helicobacter bilis ATCC 43879] Length = 203 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 39/192 (20%) Query: 35 SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK-------------------- 74 GRSNVGKSS+IN+L+N K LA++S+ PG+T+ +NFF Sbjct: 2 LGRSNVGKSSIINLLLNHK-LAKSSSTPGKTKLINFFSTTWELTTNKDSMPNTHESIAMQ 60 Query: 75 ----------DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV 124 D ++ + +D PG+GYA+ K W + ++ +R +++ Sbjct: 61 CKTDSMQNNQDLLQTESMRIPLIFIDFPGFGYAKVSKDTKKVWDKHLTDFIYKRQSIKLF 120 Query: 125 YLLIDCRHGVKQIDQDVFSFLDK-----KAVSYQIVLTKIDKLSPTTAQETLEKTK---Y 176 LID RH ID ++ FL K + + TK DKL+ + + + K Sbjct: 121 CHLIDSRHTNLAIDTEIERFLQKIVESRQDCKLLQIYTKADKLNKSDYHKLKTQNKLTIS 180 Query: 177 LIRNYPTAHPEV 188 ++ P A ++ Sbjct: 181 TLKKTPQATQQL 192 >gi|28868645|ref|NP_791264.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato str. DC3000] gi|213971514|ref|ZP_03399625.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato T1] gi|301386119|ref|ZP_07234537.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato Max13] gi|302060181|ref|ZP_07251722.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato K40] gi|302135124|ref|ZP_07261114.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato NCPPB 1108] gi|37999588|sp|Q886Y6|DER_PSESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|28851883|gb|AAO54959.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato str. DC3000] gi|213923706|gb|EEB57290.1| GTP-binding protein EngA [Pseudomonas syringae pv. tomato T1] gi|330872875|gb|EGH07024.1| GTP-binding protein Der [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965919|gb|EGH66179.1| GTP-binding protein Der [Pseudomonas syringae pv. actinidiae str. M302091] gi|331019376|gb|EGH99432.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 489 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 191 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 243 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 244 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 301 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 302 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISALHGTGVGNL 356 Score = 97.9 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGAHGRGISQMLEI 157 >gi|329897033|ref|ZP_08271805.1| GTP-binding protein EngA [gamma proteobacterium IMCC3088] gi|328921473|gb|EGG28859.1| GTP-binding protein EngA [gamma proteobacterium IMCC3088] Length = 463 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 74/181 (40%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A ++A GR NVGKS+L+N ++ + + + PG T+ + + + Sbjct: 172 QAHGIKVAIVGRPNVGKSTLVNRMLGEERVV-VYDHPGTTRDSVYI------DFEREGEQ 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + K++V+ + IV+ L V LL+D G+ D + Sbjct: 225 YTLIDTAGVRRRKNVKESVEKFS--IVKTLKAIDDSNVVLLLMDAHEGIVDQDMHLLGHC 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + +V+ K D L + ++ ++ S++ G+ L +A Sbjct: 283 IEAGRALVVVVNKWDGLDDYQKDRIKDSISRRLK--FVEFAQMHFISALHGSGVGHLYQA 340 Query: 206 I 206 I Sbjct: 341 I 341 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 24/181 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ G T+ + K ++ Sbjct: 3 PVIALMGRPNVGKSTLFNQLTRSRD-ALVADFSGLTRDRKY------GEGKVGERPYVVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + + V L++D R G+ +DQ++ S L +++ Sbjct: 56 DTGGITGDENGIDLPMAQQSM-----AAADEADIVLLILDARAGLTGVDQELVSLLRRQS 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + +V+ KID ++ TA + Y + ++ +G+ R I E Sbjct: 111 IPFHVVVNKIDGMNSDTA---------MGDFYSLGIDPLYRIAASHNRGV---RSMIEEV 158 Query: 210 I 210 + Sbjct: 159 L 159 >gi|289626149|ref|ZP_06459103.1| GTP-binding protein EngA [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649055|ref|ZP_06480398.1| GTP-binding protein EngA [Pseudomonas syringae pv. aesculi str. 2250] gi|298486027|ref|ZP_07004101.1| GTP-binding protein EngA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159504|gb|EFI00551.1| GTP-binding protein EngA [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330869573|gb|EGH04282.1| GTP-binding protein Der [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 490 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISALHGTGVGNL 357 Score = 97.9 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGAHGRGISQMLEI 157 >gi|218245012|ref|YP_002370383.1| GTP-binding protein EngA [Cyanothece sp. PCC 8801] gi|257058036|ref|YP_003135924.1| GTP-binding protein EngA [Cyanothece sp. PCC 8802] gi|226741133|sp|B7K1S0|DER_CYAP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218165490|gb|ACK64227.1| small GTP-binding protein [Cyanothece sp. PCC 8801] gi|256588202|gb|ACU99088.1| small GTP-binding protein [Cyanothece sp. PCC 8802] Length = 452 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 77/197 (39%), Gaps = 13/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + +P + ++ ++A GR NVGKSSL+N L+ A S G T+ Sbjct: 162 ITYLPPPEEITQSDEIKVAIIGRPNVGKSSLLNALLGENR-AIVSPISGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + +++N L+D G + + + + I R V +ID GV Sbjct: 216 -DTVIQHNEQTYRLIDTAGIRRKKNVEYGAEFFS--INRAFKAIRRCDVVLFVIDAIDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D + + ++ S +V+ K D + + KT R Y +I S++ Sbjct: 273 TDQDLKLADRIIEEGRSVVLVINKWDAVDKDSYTIYEYKTNIFSRLYFMEWAPIIFVSAM 332 Query: 195 KRKGIEVLRKAILETIN 211 + + ILE +N Sbjct: 333 TGQRV----NKILELVN 345 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 67/182 (36%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A + PG T+ + + + Sbjct: 3 LPIVAIIGRPNVGKSTLANRLAGDQH-AIVHDEPGITRD------RTYRPGFWQDRDFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + L+ + ++D + G D ++ +L ++ Sbjct: 56 VDTGGLVF----DDDTEFLPLIREQSLAALNEASAAIFVVDGQTGPTTGDLEIADWLRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + ++ T++ + P S + G L ++ Sbjct: 112 PVPVLLAVNKC----ESPELGLIQATQF----WELGLGNPYPISGIHGNGTGELLDDLIT 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|167031915|ref|YP_001667146.1| GTP-binding protein EngA [Pseudomonas putida GB-1] gi|189037155|sp|B0KPJ1|DER_PSEPG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166858403|gb|ABY96810.1| small GTP-binding protein [Pseudomonas putida GB-1] Length = 487 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + PG T+ + + + Sbjct: 189 EKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDEPGTTRDSIYI------PFERDGEK 241 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 242 YTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + P KT+ R + ++ S++ G+ L Sbjct: 300 LEAGRAIVIALNKWDGMEPGERAYV--KTELERRLFFVDFADIHFISALHGTGVGNL 354 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + + + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRDRQY------GDATWQGRSFIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G V + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI-----TGDEVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 S +V KID + P A+ P IP + + +GI L +A+L Sbjct: 110 NKSAILVANKIDNIDPDVARAEFS---------PMGMGNAIPVAGSQGRGINALMEAVL 159 >gi|330957531|gb|EGH57791.1| GTP-binding protein Der [Pseudomonas syringae pv. maculicola str. ES4326] Length = 489 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 191 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 243 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 244 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 301 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 302 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISALHGTGVGNL 356 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAKQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGAHGRGISQMLEI 157 >gi|172039509|ref|YP_001806010.1| tRNA modification GTPase TrmE [Cyanothece sp. ATCC 51142] gi|171700963|gb|ACB53944.1| tRNA modification GTPase [Cyanothece sp. ATCC 51142] Length = 460 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 26/184 (14%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 ++A GR NVGKSSL+N +R + A ++ PG T+ + S L + Sbjct: 224 NGLKVAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDVV------ESQLVVGGIPIQ 276 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G V+ G + R S V L ID G D +++ + Sbjct: 277 VLDTAGIRQ---TTDQVEKIG--VERSRLAASQADLVLLTIDATVGWTSQDSEIYQPIRH 331 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V+ KID +P + +P E++ TS+ +GIE L AIL Sbjct: 332 --LPVILVINKIDLATPN------------LSQFPPEITEIVKTSAANHQGIEALEAAIL 377 Query: 208 ETIN 211 + IN Sbjct: 378 KAIN 381 >gi|226954466|ref|ZP_03824930.1| GTP-binding protein EngA [Acinetobacter sp. ATCC 27244] gi|294651482|ref|ZP_06728795.1| GTP-binding protein EngA [Acinetobacter haemolyticus ATCC 19194] gi|226834815|gb|EEH67198.1| GTP-binding protein EngA [Acinetobacter sp. ATCC 27244] gi|292822632|gb|EFF81522.1| GTP-binding protein EngA [Acinetobacter haemolyticus ATCC 19194] Length = 469 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 76/191 (39%), Gaps = 20/191 (10%) Query: 21 IGLLPKAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + +P+ PE +A GR NVGKS+L+N L+ + + + PG T+ + Sbjct: 159 LAEVPEDENPEEHNKNTGLRLAIIGRPNVGKSTLVNRLLGEERVV-AFDQPGTTRDSIYI 217 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + + L+D G + ++ + IV+ L V +++D R Sbjct: 218 ------PFERDGRQYTLIDTAGVRRKGKVDEMIEKFS--IVKTLQAMKDANVVVIVVDAR 269 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G+ + D + + + + I + K D ++ ++ + P A ++ Sbjct: 270 EGIVEQDLHLIGYALEAGRAMVIAINKWDNMTEYDRKQCKLDVERRFDFIPWA--KIHLI 327 Query: 192 SSVKRKGIEVL 202 S++ G+ L Sbjct: 328 SALHGTGVGEL 338 Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 65/178 (36%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + + A ++ G T+ + + + +V Sbjct: 3 PVIALIGRPNVGKSTLFNQIT-KSRDALVADFAGLTRDRKY------GDAVYQNKSFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G + + + + ++D R G+ D+ + L Sbjct: 56 DTGGIGENEGGID-----SYMAEQSKTAIHEADIIVFVVDARAGLLASDEQIARELRTLG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K+D + A L+ Y E + ++ +G++ + + +L Sbjct: 111 KKVYLVANKVDGVHAEAA---------LVEFYKLGMGEPLQVAASHGRGVQQMLEDVL 159 >gi|212702039|ref|ZP_03310167.1| hypothetical protein DESPIG_00041 [Desulfovibrio piger ATCC 29098] gi|212674554|gb|EEB35037.1| hypothetical protein DESPIG_00041 [Desulfovibrio piger ATCC 29098] Length = 382 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 71/189 (37%), Gaps = 18/189 (9%) Query: 22 GLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 LLP E +A GR N GKSS+IN L + + S+ G T+ Sbjct: 105 DLLPDDYEAEHEPPALRLAMLGRPNAGKSSMINALAGEERM-IVSDVAGTTRDSV----- 158 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + VD G V+ + + L + L +D GV Sbjct: 159 -DVRFERDGQDYVFVDTAGVRRRTKITDIVEKYS--VNAALKSTTKADVTLLTLDATEGV 215 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 Q D+ + LD + + + +++ K D + ++ L+ ++ H ++ S++ Sbjct: 216 SQQDKRLMDLLDTRKIPFMVLVNKCDLVPAGQLKQLLQNVSEMLA--FCKHVPILTVSAL 273 Query: 195 KRKGIEVLR 203 K G+ + Sbjct: 274 KGTGLNKIL 282 Score = 61.3 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 44/111 (39%), Gaps = 9/111 (8%) Query: 100 PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKI 159 P+ ++ + + V ++D R G+ +D+ + + + + + V+ K+ Sbjct: 6 PEGIRGFESDILRQAEAAMKDACAVAFVVDGRDGLLPLDEYLAAHIRRMGLPTLCVVNKV 65 Query: 160 DKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 D LEK L+ + + ++P S+ I L + + + + Sbjct: 66 D---------GLEKEDELLAEFHSLGFPLLPVSAEHGHNIRALTEELADLL 107 >gi|167630055|ref|YP_001680554.1| GTP-binding protein [Heliobacterium modesticaldum Ice1] gi|238687893|sp|B0TFW3|DER_HELMI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|167592795|gb|ABZ84543.1| GTP-binding protein [Heliobacterium modesticaldum Ice1] Length = 442 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 17/189 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +IA GR NVGKSSL+N ++ ++ + S+ PG T+ + + Sbjct: 174 DPDTIKIAVIGRPNVGKSSLVNAILGQERV-IVSDIPGTTRDAI------DTAFDRDGKR 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + R L V ++ID GV + D+ + + Sbjct: 227 YILIDTAGMRRKGRIEEAVERYSVM--RSLRAIDRSDVVLMVIDASQGVTEQDKKIAGYA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 + + +VL K D + +T+ + ++R+ A+ I S++ ++ + Sbjct: 285 HEAGKACVLVLNKWDLVPKDD--KTMSRFDKVVRSEMSFLAYAPTIYVSALTKQRLPK-- 340 Query: 204 KAILETINY 212 ILE +++ Sbjct: 341 --ILELVDF 347 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 63/181 (34%), Gaps = 19/181 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + +A + PG T+ + + +V Sbjct: 4 PIVAIVGRPNVGKSTLFNRLTGGR-VAIVEDQPGVTRDRLY------RDANWLDREFTVV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + E + L+D R G+ D+ V + L K Sbjct: 57 DTGGLDFGDRENPFSAIIHKQAEAAMEE---ADVILFLVDGRSGITADDEAVAAILRKAK 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KI E + + Y E IP S+ L A++ Sbjct: 114 KPVFLVVNKI---------EDFSQRERYFDFYSLGLGEPIPISASHGMNTGDLLDAVVAV 164 Query: 210 I 210 + Sbjct: 165 L 165 >gi|253699395|ref|YP_003020584.1| GTP-binding protein EngA [Geobacter sp. M21] gi|259645878|sp|C6E0Y6|DER_GEOSM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|251774245|gb|ACT16826.1| small GTP-binding protein [Geobacter sp. M21] Length = 440 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 68/183 (37%), Gaps = 20/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N LV R+ A + PG T+ N+ F LV Sbjct: 3 PIIAIVGRPNVGKSTLFNRLVGRRK-AMVDDMPGVTRDRNYAEVNRFD------VPFILV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P+ + + + + ++D R G+ D+DV L + Sbjct: 56 DTGGF----EPETSDRLLQQMREQSRFAMDEADLILFVMDARGGLTPADRDVVDMLRRIN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 ++ K+D QE Y + S+ +G+ L +L Sbjct: 112 KPVFYIINKVD----GEKQEA-----EAGDFYSLGVDHIHTISAEHNRGVGDLMDEVLAA 162 Query: 210 INY 212 I Y Sbjct: 163 IPY 165 Score = 97.9 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 17/185 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + G T+ + N L+D Sbjct: 178 IAVVGRPNVGKSTLVNRLLGYERVV-ANPTAGTTRDAV------DTRFTVNKKPYLLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + + L V ++++ GV + D + + + Sbjct: 231 AGIRRKGKTVQKVEKYSVM--DALRSIERADVVLIVLNAEEGVTEQDSKIAGYAYEAGRG 288 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRK--G--IEVLRKA 205 V+ K D L+ ++ K IR P ++ S+ + G I + + Sbjct: 289 CIFVVNKWDTLAKD--NSSIAKFTEEIRRNFKYLPFAPILFVSAETGQRTGKIIAEVDQV 346 Query: 206 ILETI 210 + + Sbjct: 347 MEQYC 351 >gi|163784433|ref|ZP_02179314.1| GTP-binding protein [Hydrogenivirga sp. 128-5-R1-1] gi|159880300|gb|EDP73923.1| GTP-binding protein [Hydrogenivirga sp. 128-5-R1-1] Length = 451 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 72/185 (38%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K ++A G+ N GKSS++N + + A SN PG T+ + + +K Sbjct: 181 KKDEIKVAIIGKPNAGKSSILNAITGEER-ALVSNIPGTTRDVV------DTMVKIENKT 233 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G V+ + + R L V +ID G + DQ + Sbjct: 234 YRFLDTAGLRKKSKVDYGVEFFS--VGRTLDAIKKADVVVHVIDAEQGATEQDQKIAHLS 291 Query: 146 DKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 K IV+ KID+L L++ K + Y + V+ S+ K I+ L Sbjct: 292 QKYYKPVVIVINKIDRLPKRKEVLNSLLKQVKEKL--YFLPYAPVLTVSAKKHINIDKLL 349 Query: 204 KAILE 208 K + E Sbjct: 350 KTVEE 354 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N ++ +K A + PG T+ ++ N+ LVD Sbjct: 4 VAIVGRPNVGKSSLFNRIIGQKK-AIVEDIPGITRDR-LIQTTEWRNI-----PFELVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 GY + + D + I + + E L++D + G+ + D+D+ L K Sbjct: 57 GGYI-----ETDDDKFAPFIRKQIEKEMEDADAFILVVDSKTGLTEADKDIARILHKTEK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I + K+D S + Y +V P S++++ G+ L ++E I Sbjct: 112 PVYIAVNKVDNPSQED---------TIYEFYELGFDKVFPVSTIQKYGVADLLDEVIENI 162 >gi|320335804|ref|YP_004172515.1| GTP-binding protein engA [Deinococcus maricopensis DSM 21211] gi|319757093|gb|ADV68850.1| GTP-binding protein engA [Deinococcus maricopensis DSM 21211] Length = 441 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 22/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL N LV R+ A ++ PG T+ V + + L+D Sbjct: 3 KVAIVGRPNVGKSSLFNRLVGRRE-AVVADFPGVTRDAKEGV------MLYQNHRIVLID 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + +CV ++D R + D +V +L + Sbjct: 56 TGGLWSGDEWEEAIRQKAEW------AMEGAQCVIFVLDPRDDLSAADYEVAEWLRRLGK 109 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V KID YL + E +P S+ +G++ L +L+ + Sbjct: 110 PVIVVANKIDNPKHDA---------YLAELWGLGFGEPLPVSAEHARGLDDLMDRVLDYL 160 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 21/192 (10%) Query: 21 IGLLPKAG--PPEIA-----FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP+ PE+A GR NVGKSSL+N + + + S+ PG T+ + V Sbjct: 157 LDYLPEDDADVPEVAPIRISLIGRPNVGKSSLLNAITGSERV-IVSDVPGTTRD-SVDVE 214 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D++ + LVD G + P +++ + + RS V LL+ Sbjct: 215 WDYAGQR-----FVLVDTAGIR--KRPDTSIEEYAMMRSEAAITRSD---VILLVLNVTE 264 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + + + +V+ K D + ++ + + + A + TS+ Sbjct: 265 LGDHELKLANLAYDSGKPVIVVVNKWDLVPDEDLKKAEKDLDQKL--FHIAFAPRVYTSA 322 Query: 194 VKRKGIEVLRKA 205 + GI L Sbjct: 323 INEYGIHDLLAE 334 >gi|332158357|ref|YP_004423636.1| GTP-binding protein [Pyrococcus sp. NA2] gi|331033820|gb|AEC51632.1| GTP-binding protein [Pyrococcus sp. NA2] Length = 190 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 26/192 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L ++ R PG T+ + ++ N K ++DM Sbjct: 4 IIFVGRSNVGKSTLIYRLTGKR--VRRGKRPGVTRKIIEL---EWKNHK-------VIDM 51 Query: 92 PGYGY-ARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-----------HGVKQID 138 PG+G+ P++ + IV ++ + + + L++D + G ID Sbjct: 52 PGFGFMLGLPREVQERIKDEIVHFIEDNADKIDVAVLVVDGKAAPEIIERWEKRGEIPID 111 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + FL + + + + KIDK+ K+ + + IP S+ Sbjct: 112 VEFYQFLRELNIPTIVAVNKIDKVKNVQRVIHFLAEKFGV-PWSEIDKVFIPVSAKFGDN 170 Query: 199 IEVLRKAILETI 210 IE L+ I E I Sbjct: 171 IERLKNRIYEVI 182 >gi|325272131|ref|ZP_08138563.1| GTP-binding protein Der [Pseudomonas sp. TJI-51] gi|324102727|gb|EGC00142.1| GTP-binding protein Der [Pseudomonas sp. TJI-51] Length = 487 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + PG T+ + + + Sbjct: 189 EKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDQPGTTRDSIYI------PFERDGEK 241 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 242 YTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + P KT+ R + ++ S++ G+ L Sbjct: 300 LEAGRAIVIALNKWDGMQPGERDYV--KTELERRLFFVDFADIHFISALHGTGVGNL 354 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 66/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + + + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRDRQY------GDASWQGRSFIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G V + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI-----TGDEVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V KID + A+ P IP + + +GI L +A+L Sbjct: 110 NKEAILVANKIDNIDADVARAEFS---------PLGMGNAIPVAGSQGRGINALMEAVL 159 >gi|197117132|ref|YP_002137559.1| GTP-binding protein EngA [Geobacter bemidjiensis Bem] gi|238690874|sp|B5EE25|DER_GEOBB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|197086492|gb|ACH37763.1| GTPase EngA [Geobacter bemidjiensis Bem] Length = 440 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 68/183 (37%), Gaps = 20/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N LV R+ A + PG T+ N+ F LV Sbjct: 3 PIIAIVGRPNVGKSTLFNRLVGRRK-AMVDDMPGVTRDRNYAEVNRFD------VPFILV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P+ + + + + ++D R G+ D+DV L + Sbjct: 56 DTGGF----EPETSDRLLQQMREQSRFAMDEADLILFIMDARGGLTPADRDVVDMLRRIN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 ++ K+D QE Y + S+ +G+ L +L Sbjct: 112 KPVFYIINKVD----GEKQEA-----EAGDFYSLGVDHIHTISAEHNRGVGDLMDEVLAA 162 Query: 210 INY 212 I Y Sbjct: 163 IPY 165 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 13/168 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + G T+ + N L+D Sbjct: 178 IAVVGRPNVGKSTLVNRLLGYERVV-ANPTAGTTRDAV------DTRFTVNKKPYLLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + + L V ++++ GV + D + + + Sbjct: 231 AGIRRKGKTVQKVEKYSVM--DALRSIERADVVLIVLNAEEGVTEQDSKIAGYAYEAGRG 288 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRK 197 V+ K D L+ ++ K IR P ++ S+ + Sbjct: 289 CIFVVNKWDTLAKD--NSSIAKFTEEIRRNFKYLPFAPILFVSAETGQ 334 >gi|291613885|ref|YP_003524042.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1] gi|291583997|gb|ADE11655.1| ribosome-associated GTPase EngA [Sideroxydans lithotrophicus ES-1] Length = 465 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 78/192 (40%), Gaps = 11/192 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 E+ K+ P++A GR NVGKS+L+N ++ + + + PG T+ + Sbjct: 165 AAEVEAEEKSDHPKLAIVGRPNVGKSTLVNAILGEERV-IAFDQPGTTRDSIYI------ 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + ++D G + ++ + +V+ L V L++D R + + Sbjct: 218 DFERAGRQYTIIDTAGIRRRGKIDEAIEKFS--VVKTLQAIEDANVVVLVVDARDQITEQ 275 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ + + + + K D L + + + + + S++ Sbjct: 276 DAHLADFVLQAGRALVLAVNKWDGLDEYKRDTVKRDIERKL--HFLSFAKHHFISALNGT 333 Query: 198 GIEVLRKAILET 209 G++ L K++ + Sbjct: 334 GVDALLKSVNQA 345 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 LPTLVLVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGRGRVGERPYLV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + V ++D R G+ D+ + + L K Sbjct: 55 VDTGGLEPVAKEG----IMHEMAKQTRQAVDEADLVLFIVDGRDGLTPQDRIIATQLRKT 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ K E + + + + E IP SS + + + L+ Sbjct: 111 GRPVMLLVNKA---------EGMRRERVTADFHELGLGEPIPISSAHGDNVAEMIEVALD 161 Query: 209 TI 210 + Sbjct: 162 EL 163 >gi|198283717|ref|YP_002220038.1| GTP-binding protein EngA [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667499|ref|YP_002426346.1| ribosome-associated GTPase EngA [Acidithiobacillus ferrooxidans ATCC 23270] gi|226741127|sp|B7JC34|DER_ACIF2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238690897|sp|B5EJF7|DER_ACIF5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|198248238|gb|ACH83831.1| small GTP-binding protein [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519712|gb|ACK80298.1| ribosome-associated GTPase EngA [Acidithiobacillus ferrooxidans ATCC 23270] Length = 449 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L+N ++ K + + PG T+ + + Sbjct: 177 GPRIAMLGRPNVGKSTLVNTMLGEKRV-LVFDEPGTTRDSIRI------PYERQGKPYVM 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ L + LS V L++D R G+ + D + + Sbjct: 230 IDTAGMRRRARVGEGLEKLSVL--KTLSALREADVVLLVLDARLGIAEQDAHLVGVAVEL 287 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K D ++P + ++ + + + V S++ G+ L K+I + Sbjct: 288 GRPIVVVVNKWDGMTPEERKAVKQELERRLD--FIRYAPVYTISALHGTGVGDLYKSIDQ 345 Query: 209 T 209 Sbjct: 346 L 346 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 63/176 (35%), Gaps = 20/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+ N L R A ++ PG T+ + + + +VD Sbjct: 5 IALVGRPNVGKSTFFNRLT-RTREALVADLPGLTRD------RHYGTAQFEGRQYLVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ P++ + + + + L+D + G+ D ++ L + Sbjct: 58 GGF----EPEEREGLVAAMAAQTRLAITEADAICFLVDAKEGLSTQDAEIAQELRRGGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D L Y S+ G+E L +AI Sbjct: 114 IYLVVNKMD---------AKGAVSELPEFYRLGLGTPYTISAAHGHGVEPLLEAIF 160 >gi|148981906|ref|ZP_01816564.1| GTP-binding protein Era [Vibrionales bacterium SWAT-3] gi|145960707|gb|EDK26049.1| GTP-binding protein Era [Vibrionales bacterium SWAT-3] Length = 323 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 26/193 (13%) Query: 26 KAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + PE IA GR NVGKS+L+N ++ +K ++ TS P T+H V + Sbjct: 20 QPSLPENQHCGFIAIVGRPNVGKSTLLNHILGQK-ISITSRKPQTTRHRIMGVETE---- 74 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQID 138 VD PG + + L+ R + S + V+ L+D H + D Sbjct: 75 --GDYQAIFVDTPGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTEDD 126 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + V + L K + + K+D + T + + + + +V+P S+ + K Sbjct: 127 EMVLNKLKKTDFPVVLCINKVDNVQDRTNVMQHMMEVSKKM-----DFIDVVPISAKQGK 181 Query: 198 GIEVLRKAILETI 210 I+VLRK + E + Sbjct: 182 NIDVLRKHVREHL 194 >gi|29654548|ref|NP_820240.1| GTP-binding protein EngA [Coxiella burnetii RSA 493] gi|153208833|ref|ZP_01947057.1| GTP-binding protein EngA [Coxiella burnetii 'MSU Goat Q177'] gi|154706295|ref|YP_001424682.1| GTP-binding protein EngA [Coxiella burnetii Dugway 5J108-111] gi|161830868|ref|YP_001597096.1| GTP-binding protein EngA [Coxiella burnetii RSA 331] gi|165921454|ref|ZP_02219642.1| GTP-binding protein EngA [Coxiella burnetii RSA 334] gi|212218660|ref|YP_002305447.1| GTP-binding protein EngA [Coxiella burnetii CbuK_Q154] gi|41017032|sp|Q83C83|DER_COXBU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189037144|sp|A9KFU3|DER_COXBN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189037145|sp|A9NDV6|DER_COXBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238058971|sp|B6J7Q3|DER_COXB1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|29541815|gb|AAO90754.1| GTP-binding protein [Coxiella burnetii RSA 493] gi|120575684|gb|EAX32308.1| GTP-binding protein EngA [Coxiella burnetii 'MSU Goat Q177'] gi|154355581|gb|ABS77043.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111] gi|161762735|gb|ABX78377.1| GTP-binding protein EngA [Coxiella burnetii RSA 331] gi|165916769|gb|EDR35373.1| GTP-binding protein EngA [Coxiella burnetii RSA 334] gi|212012922|gb|ACJ20302.1| GTP-binding protein [Coxiella burnetii CbuK_Q154] Length = 443 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 +IA GR NVGKS+LIN L+ + + + PG T+ + N L Sbjct: 175 GIKIAMIGRPNVGKSTLINRLLGEERV-IVYDQPGTTRDSIYI------PFARNDENYTL 227 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L+D R GV + D + + + + Sbjct: 228 IDTAGIRRRAKIQDYVEKFS--MIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEA 285 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 VS I + K D L+ + A I S++ G+ L +AI E Sbjct: 286 GVSLIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFI--SALHGTGVGKLFRAIQE 343 Query: 209 T 209 + Sbjct: 344 S 344 Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 65/182 (35%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + A ++ PG T+ + S + L Sbjct: 2 LPVIAIVGRPNVGKSTLFNYLT-KSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD A + V+ C+ L+D + G+ D+ + L KK Sbjct: 61 VDTENKEVAPLAETQVEQ----------AIDESDCILFLVDAKAGLVPADEIIAERLRKK 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K D + + P VI + +G++ L +LE Sbjct: 111 GKKIFLAVNKAD-------RARAAVVQSDFYKLGFGEPYVIA--AASGRGVKDLMTQVLE 161 Query: 209 TI 210 + Sbjct: 162 NL 163 >gi|308811190|ref|XP_003082903.1| putative endonuclease (ISS) [Ostreococcus tauri] gi|116054781|emb|CAL56858.1| putative endonuclease (ISS) [Ostreococcus tauri] Length = 820 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 8/132 (6%) Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD+PGYG+A AP+ + W YL +R TL V LLID +++D + +L Sbjct: 2 VDLPGYGFANAPEALREKWAEFTREYLLKRETLITVMLLIDSTVKPQRLDLECLDWLGAA 61 Query: 149 AVSYQIVLTKIDKLSPTTA------QETLEKT-KYLIRNY-PTAHPEVIPTSSVKRKGIE 200 + IV TK+DK A QET+E+ + + N+ P +I TSS +G Sbjct: 62 GIPVTIVFTKVDKRKKIAAGKRANPQETMEEFCREAMDNWDWDELPPMIYTSSETAEGKR 121 Query: 201 VLRKAILETINY 212 + I + Sbjct: 122 EVLNHIASLRQF 133 >gi|156103005|ref|XP_001617195.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148806069|gb|EDL47468.1| hypothetical protein, conserved [Plasmodium vivax] Length = 703 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 16/172 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSS--------LINILVNRKNLARTSNAPGRT 65 FL + G EI GRSNVGKS+ LIN VN + S G T Sbjct: 521 FLGKFHNYEKIENYGVNEICILGRSNVGKSTFLRNFIKYLIN--VNEHATVKVSKNSGCT 578 Query: 66 QHLNFFVPKDFSNLKNNLPAMALVDMPGYGYAR-APKKNVDSWGGLIVRYLSERSTLRCV 124 + +N + ++ K L DMPG+GYA KK ++ + Y+ R+ + Sbjct: 579 RSINLYAFENGKKKK----LFILTDMPGFGYAAGIGKKKMEFLMKNLEDYIFLRNQICLF 634 Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 ++LID ++++D + + K V ++++ TK DK S + A+E L+ K Sbjct: 635 FVLIDMSVDIQKVDVSIVDAIRKTNVPFRVICTKSDKFSAS-AEERLQAIKN 685 >gi|308446118|ref|XP_003087101.1| hypothetical protein CRE_03606 [Caenorhabditis remanei] gi|308262503|gb|EFP06456.1| hypothetical protein CRE_03606 [Caenorhabditis remanei] Length = 271 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 8/102 (7%) Query: 11 AWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 FL P++ L + E+AF+GRSN GKSS IN L N+K LAR S PGRTQ +NF Sbjct: 176 KAEFLMSAPKLNLCVEDTGYEVAFAGRSNAGKSSAINALTNQKQLARASKRPGRTQMINF 235 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIV 112 F + P LVD+PGYGYA P+ W + Sbjct: 236 FSLGN--------PDQRLVDLPGYGYAAVPEAMKIVWQKELE 269 >gi|237807666|ref|YP_002892106.1| small GTP-binding protein [Tolumonas auensis DSM 9187] gi|259645887|sp|C4LC41|DER_TOLAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|237499927|gb|ACQ92520.1| small GTP-binding protein [Tolumonas auensis DSM 9187] Length = 498 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 11/183 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P + A GR NVGKS+L N ++ + + PG T+ + L+ + Sbjct: 209 DLPIKFAIIGRPNVGKSTLTNRMLGEDRV-IVYDLPGTTRDSIYI------PLERDDQHY 261 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + + V+ + +V+ L V LLID R GV D + F Sbjct: 262 IVIDTAGVRKKKKIYETVEKFS--VVKTLQAIEDANVVLLLIDAREGVSDQDLSLLGFTL 319 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S I + K D L T ++ E + + V S++ G+ L +I Sbjct: 320 HSGRSIVIAVNKWDGLDQDTKEKIKEDLERRLG--FVDFARVHFISALHGSGVGNLFDSI 377 Query: 207 LET 209 E Sbjct: 378 QEA 380 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + +V Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRSRD-ALVADFPGLTRDRKY------GQAVVDDMNFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + + + L V ++D R GV D + + L ++ Sbjct: 56 DTGGIDGSEEGIEV-----KMAEQSLQAIDESDVVLFMVDARAGVTSADIGIANHLRRQK 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K D L + Y A EV ++ +G+ L + Sbjct: 111 KKVFLVANKTDGLDGDV---------HCADFYSLALGEVYQIAASHGRGVTSLLEK 157 >gi|212212370|ref|YP_002303306.1| GTP-binding protein EngA [Coxiella burnetii CbuG_Q212] gi|238058972|sp|B6IZN3|DER_COXB2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|212010780|gb|ACJ18161.1| GTP-binding protein [Coxiella burnetii CbuG_Q212] Length = 443 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 +IA GR NVGKS+LIN L+ + + + PG T+ + N L Sbjct: 175 GIKIAMIGRPNVGKSTLINRLLGEERV-IVYDQPGTTRDSIYI------PFARNDENYTL 227 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +++ L V L+D R GV + D + + + + Sbjct: 228 IDTAGIRRRAKIQDYVEKFS--MIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEA 285 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 VS I + K D L+ + A I S++ G+ L +AI E Sbjct: 286 GVSLIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFI--SALHGTGVGKLFRAIQE 343 Query: 209 T 209 + Sbjct: 344 S 344 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 65/182 (35%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + A ++ PG T+ + S + L Sbjct: 2 LPVIAIVGRPNVGKSTLFNYLT-KSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 60 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD A + V+ C+ L+D + G+ D+ + L KK Sbjct: 61 VDTENKEVAPLAETQVEQ----------AIDESDCILFLVDAKAGLVPADEIIAERLHKK 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K D + + P VI + +G++ L +LE Sbjct: 111 GKKIFLAVNKAD-------RARAAVVQSDFYKLGFGEPYVIA--AASGRGVKDLMTQVLE 161 Query: 209 TI 210 + Sbjct: 162 NL 163 >gi|291550925|emb|CBL27187.1| ribosome-associated GTPase EngA [Ruminococcus torques L2-14] Length = 442 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA G+ NVGKSS+IN L+ + SN G T+ + + ++ Sbjct: 174 DDDRPRIAIVGKPNVGKSSIINRLLGENRV-IVSNIAGTTRDAI------DTEIVHDGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R +S V ++ID GV + D + Sbjct: 227 YIFIDTAGLRRKNKIKEELERYS--IIRTVSAVERADVVLMVIDATEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 ++ IV+ K D + +T+++ + IR + P E++ S++ + + L Sbjct: 285 HERGKGVIIVVNKWDAIEKND--KTMKEYEGKIRQVLSYMPYAEIMYVSALTGQRLPKLY 342 Query: 204 KAI 206 I Sbjct: 343 DMI 345 Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 19/177 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + +++ L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGE-MISIVKDTPGVTRDRIY------ADVDWLDRDFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + T + + D + G+ D V L + Sbjct: 57 DTGGI----EPDSSDIILSQMREQAQIAIDTADVIIFITDVKQGLVDSDSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+D + Y + +P S+ R G+ + A+ Sbjct: 113 KPVVLVVNKVDNFDK--------YMADVYEFYNLGIGDPVPISAASRLGLGDMLDAV 161 >gi|14590134|ref|NP_142198.1| GTP-binding protein [Pyrococcus horikoshii OT3] gi|3256586|dbj|BAA29269.1| 190aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 190 Score = 121 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 26/192 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F+GRSNVGKS+LI L +K R PG T+ + ++ N K ++DM Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKK--VRRGKRPGVTRKIIEI---EWKNHK-------IIDM 51 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDC-----------RHGVKQID 138 PG+G+ PK+ + IV ++ + L++D + G ID Sbjct: 52 PGFGFMMGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPID 111 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + FL + + + + K+DK+ K+ + IP S+ Sbjct: 112 VEFYQFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEV-PLSEIDKVFIPISAKFGDN 170 Query: 199 IEVLRKAILETI 210 IE L+ I E I Sbjct: 171 IERLKNRIFEVI 182 >gi|330969066|gb|EGH69132.1| GTP-binding protein Der [Pseudomonas syringae pv. aceris str. M302273PT] Length = 490 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISAMHGTGVGNL 357 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGGHGRGISQMLEI 157 >gi|294140150|ref|YP_003556128.1| GTP-binding protein EngA [Shewanella violacea DSS12] gi|293326619|dbj|BAJ01350.1| GTP-binding protein EngA [Shewanella violacea DSS12] Length = 490 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 74/186 (39%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+LIN ++ + + ++PG T+ + ++ Sbjct: 196 QDLPIKLAIIGKPNVGKSTLINRILGEERVV-VYDSPGTTRDSIYI------PMEREGRE 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +++ L V L+ID R G+ + D + F Sbjct: 249 YVLIDTAGVRRRSKVHETVEKFS--VIKTLKAIEDCNVVLLIIDAREGIAEQDLGLLGFA 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D ++ + + + S++ G+ L ++ Sbjct: 307 LNAGRALVIAVNKWDGINQEIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLYES 364 Query: 206 ILETIN 211 + E + Sbjct: 365 VEEAYD 370 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRASLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ ++ + + L+ V L D R G+ D + L ++ Sbjct: 55 VDTGGI---DGTEEGIEVH--MAEQSLAAIEEADVVLFLTDARAGLTAADHAIADHLRRR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 DKTTFVVANKVDGID 124 >gi|221061197|ref|XP_002262168.1| GTPase [Plasmodium knowlesi strain H] gi|193811318|emb|CAQ42046.1| GTPase, putative [Plasmodium knowlesi strain H] Length = 703 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 16/158 (10%) Query: 28 GPPEIAFSGRSNVGKSS--------LINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 G EI GRSNVGKS+ LIN VN + S G T+ +N + ++ Sbjct: 518 GVNEICILGRSNVGKSTFLRNFIKYLIN--VNEHANVKVSKNSGCTRSINLYSFENGKKK 575 Query: 80 KNNLPAMALVDMPGYGYAR-APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 K L DMPG+GYA KK ++ + Y+ R+ + ++LID +++ID Sbjct: 576 K----LFILTDMPGFGYAAGIGKKKMEFLRKNLEDYIFLRNQICLFFVLIDMSVDIQKID 631 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKY 176 + + K + ++++ TK DK S T A E LE K Sbjct: 632 VSIVDAIKKTNIPFRVICTKSDKFS-TKADERLEAIKN 668 >gi|223985795|ref|ZP_03635838.1| hypothetical protein HOLDEFILI_03144 [Holdemania filiformis DSM 12042] gi|223962243|gb|EEF66712.1| hypothetical protein HOLDEFILI_03144 [Holdemania filiformis DSM 12042] Length = 434 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 18/199 (9%) Query: 21 IGLLPKAGPPE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 +G P+ PE A GR NVGKSSL+N L+ + + S+ G T+ Sbjct: 160 VGAFPEKQQPELEGIRFAIIGRPNVGKSSLVNALLKEERV-IVSDIEGTTRDAV------ 212 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + +++ +VD G +N++ + L R +S V +ID G++ Sbjct: 213 DTPFEHDGKQYVVVDTAGIRKRGKVYENIEKYSVL--RAMSAIERCDVVLFVIDGESGIR 270 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSS 193 + D+ V + + IV K D + +T+ + IR ++ V+ S+ Sbjct: 271 EQDKHVAGYAHEAGKPIIIVYNKWDAVEKDE--KTMNRVTEQIRAQFVYLSYAPVLFVSA 328 Query: 194 VKRKGIEVLRKAILETINY 212 + + L I + +Y Sbjct: 329 KTHQRVNTLLPMIDDVYHY 347 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS++ N ++ + ++ + PG T+ + + L+D Sbjct: 6 VAIVGRPNVGKSTIFNRILGER-VSIVEDTPGVTRDRIYGKGTWLTQ------DFRLIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G P + I + +++ R GV D+ + L + Sbjct: 59 GGIQLENQPFQEEIKAQVEI-----AIEEADVILFVVNGRDGVTGDDEFIARMLRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + KID T Q + + Y E I S GI + A++ Sbjct: 114 VVLAVNKID---DATLQGNIYEF------YALGLSEPIAVSGSHGIGIGDVMDALV 160 >gi|189425185|ref|YP_001952362.1| GTP-binding protein EngA [Geobacter lovleyi SZ] gi|238692111|sp|B3E421|DER_GEOLS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189421444|gb|ACD95842.1| small GTP-binding protein [Geobacter lovleyi SZ] Length = 449 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 65/179 (36%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N +V + A + PG T+ N+ V + + LVD Sbjct: 5 VAIVGRPNVGKSTLFNRIVGERR-AIVDDMPGVTRDRNYAVVERYDK------PFILVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ + + + L + L+D + G+ D +V S L + Sbjct: 58 GGFEPVTEDR----MLQQMREQSLLAMEEADVILFLMDAKQGLTPADNEVASMLRRVDKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 V+ K+D E Y + S+ +GI L I+ + Sbjct: 114 VFYVVNKVD----GEKVEN-----EAAEFYALGIDNMHTISAAHNRGIRDLLDEIMALL 163 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 75/198 (37%), Gaps = 23/198 (11%) Query: 21 IGLLPKAGPP------EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFV 72 + LLP P IA GR NVGKSSL+N L+ + + + G T+ FF Sbjct: 160 MALLPDEPLPGEDEVTNIAVVGRPNVGKSSLVNRLLGFERVV-ANPVAGTTRDSVDTFFT 218 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 L+D G + ++ + +V L ++++ Sbjct: 219 CN--------KKRYCLIDTAGIRRKGKTSQKLEKYS--VVDALKSIERADVALIVLNAED 268 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIP 190 G+ + D+ + ++ + + V+ K D L + +E+ +Y + A ++ Sbjct: 269 GITEQDKHIAGYVYEAGRACVFVVNKWDTLEKDNKTIGKFVEQIQYEFK--FLAFAPIVF 326 Query: 191 TSSVKRKGIEVLRKAILE 208 S+ + I + + E Sbjct: 327 VSARTGQRIHKVMEEAAE 344 >gi|66044500|ref|YP_234341.1| GTP-binding protein EngA [Pseudomonas syringae pv. syringae B728a] gi|81308464|sp|Q4ZX19|DER_PSEU2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|63255207|gb|AAY36303.1| Small GTP-binding protein domain:GTP-binding [Pseudomonas syringae pv. syringae B728a] Length = 490 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISAMHGTGVGNL 357 Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGAHGRGISQMLEI 157 >gi|76800940|ref|YP_325948.1| GTP-binding protein [Natronomonas pharaonis DSM 2160] gi|119369220|sp|Q3IU04|ENGB_NATPD RecName: Full=Probable GTP-binding protein EngB gi|76556805|emb|CAI48379.1| probable GTP-binding protein [Natronomonas pharaonis DSM 2160] Length = 206 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 26/196 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI GRSNVGKS+L+ + + A T +PG T N + D++ + D Sbjct: 11 EIVLVGRSNVGKSTLMREITGHDSFA-TGGSPGVTTKPNHY---DWAG-----DDFVITD 61 Query: 91 MPGYGYAR-APKKNVDSWGGLIVRYLSERST--LRCVYLL-----IDC--RH-GVKQI-- 137 +PG+G+ P+ +S +V+Y+ + L + ++ +D RH G +I Sbjct: 62 LPGFGFMSGVPEDVRESIKRDVVQYIEAHADNILAGILVVDGKAVVDIIDRHSGPDEIPH 121 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVK 195 D ++F FL + + + + K+DK+ E L++ + YP E++ S K Sbjct: 122 DVEMFGFLQELGIPTVVAVNKMDKVD--DRDERLDELAERLGLYPPWQQFDEMLAPISAK 179 Query: 196 RKGIEVLRKAILETIN 211 R IE L +A+ ++ Sbjct: 180 RGSIEPLNQAVRHHLH 195 >gi|330874711|gb|EGH08860.1| GTP-binding protein Der [Pseudomonas syringae pv. glycinea str. race 4] Length = 440 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISAMHGTGVGNL 357 Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGAHGRGISQMLEI 157 >gi|71735846|ref|YP_273582.1| GTP-binding protein EngA [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487194|ref|ZP_05641235.1| GTP-binding protein EngA [Pseudomonas syringae pv. tabaci ATCC 11528] gi|123637657|sp|Q48LZ0|DER_PSE14 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71556399|gb|AAZ35610.1| GTP-binding protein engA [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322917|gb|EFW79007.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str. B076] gi|320329960|gb|EFW85948.1| GTP-binding protein EngA [Pseudomonas syringae pv. glycinea str. race 4] gi|330985018|gb|EGH83121.1| GTP-binding protein Der [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009189|gb|EGH89245.1| GTP-binding protein Der [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 490 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISAMHGTGVGNL 357 Score = 97.9 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGAHGRGISQMLEI 157 >gi|110633049|ref|YP_673257.1| GTP-binding protein EngA [Mesorhizobium sp. BNC1] gi|123162694|sp|Q11KI3|DER_MESSB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|110284033|gb|ABG62092.1| small GTP-binding protein [Chelativorans sp. BNC1] Length = 470 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 68/178 (38%), Gaps = 20/178 (11%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L N LV R+ +A + PG T+ + ++D Sbjct: 4 KVAIVGRPNVGKSTLFNRLVGRR-IALVDDTPGVTRDRRVHSARLLDL------RFDVID 56 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G A AP G + + + V +ID R G+ D+ + +K Sbjct: 57 TAGLEEAAAPT----LAGRMRAQTETAIDEADLVLFMIDARAGLMPDDRAFAEVVRRKGK 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K D T LE + + + S+ +G+ LR AI E Sbjct: 113 PVVLVANKTD--VRGTDAGVLEA-------FALGLGDPVAVSAEHGQGMVELRDAIAE 161 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 19/185 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA GR NVGKS+LIN L+ + L T G T+ + Sbjct: 195 PTKPIRIAVVGRPNVGKSTLINALIGEERL-LTGPEAGITRDSI------SVDWHWRGRE 247 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L D G ++ ++ + L V ++ D ++ D + + Sbjct: 248 IKLFDTAGMRRKARVQEKLEKLS--VGESLRAIRFAEVVIIVFDATMPFEKQDLQIADLI 305 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV-----IPTSSVKRKGIE 200 ++ + I K D + + EK L P+ +P S+ +G++ Sbjct: 306 VREGRAPVIAFNKWDLI-----ENRQEKLAELREKTDRLLPQARGLRSVPISAETGRGLD 360 Query: 201 VLRKA 205 L +A Sbjct: 361 QLLEA 365 >gi|169831333|ref|YP_001717315.1| small GTP-binding protein [Candidatus Desulforudis audaxviator MP104C] gi|238688334|sp|B1I462|DER_DESAP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169638177|gb|ACA59683.1| small GTP-binding protein [Candidatus Desulforudis audaxviator MP104C] Length = 438 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 79/197 (40%), Gaps = 9/197 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + G+P P++ P IA GR NVGKSSL+N ++ + + S+ PG T+ Sbjct: 161 VAGMPAGADEPRSEPVRIAVVGRPNVGKSSLVNAILGEERV-IVSDVPGTTRDAV----- 214 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + + +D G +++++ + L + ERS L V L D GV Sbjct: 215 -DTLFRRDGREYVFIDTAGMRRKARIRESIEYYSVLRAKKALERSDLALVVL--DFTDGV 271 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 DQ + ++ IV+ K D + + + + + V+ S+V Sbjct: 272 TNQDQRIAGLAEEAGKGTIIVVNKWDLAEGSGVSASRYQEEVRRELIFIGYAPVLCVSAV 331 Query: 195 KRKGIEVLRKAILETIN 211 G+ + + + Sbjct: 332 SGLGVPKILDTVESVMG 348 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 20/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N ++ R+ A PG T+ + D++ LV Sbjct: 4 PVVAIVGRPNVGKSTLFNRILGRQA-AVVDAEPGVTRDR-LYQEVDWAGRH-----FILV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + + + + ++D G+ + D V + L + + Sbjct: 57 DTGGIESQAGEDMANRVFDQVR----RAMAEAQLILYVLDGNAGLLEEDVQVAALLRRSS 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D S L Y E +P S+ + I L ++ Sbjct: 113 KPVLVVVNKVDDFSRPLP---------LADFYRLGLGEPVPVSAAQGLNIGDLLDLVV 161 >gi|319763709|ref|YP_004127646.1| ribosome-associated gtpase enga [Alicycliphilus denitrificans BC] gi|330824028|ref|YP_004387331.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans K601] gi|317118270|gb|ADV00759.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans BC] gi|329309400|gb|AEB83815.1| ribosome-associated GTPase EngA [Alicycliphilus denitrificans K601] Length = 447 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A +A +GR NVGKS+LIN + + L + PG T+ + N Sbjct: 176 EANVIRLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDAI------SVPFERNGQK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L + V LL+D GV D + ++ Sbjct: 229 FELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYI 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I + K D + Q+ + + + S++KR+GI L + Sbjct: 287 LESGRAVVIAVNKWDAVDDYGRQQLERSIETRLS--FLKFAPLHFISAMKRQGIGPLWAS 344 Query: 206 ILET 209 I++ Sbjct: 345 IVQA 348 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 26/184 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ G T+ + + N + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGNGRQGKHEFIVI 55 Query: 90 DMPGYGY---ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + ++ + + V ++D R G+ D D+ +L Sbjct: 56 DTGGFEPDASSGIYREMAKQTQQAV-------AEADVVIFVVDVRGGLSAQDHDIAKYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K E ++ + +L Y EV P S+ +G+ L + Sbjct: 109 RLGKPCVLAGNKA---------EGMQDSAHLAEFYELGLGEVHPVSAAHGQGVRSLVELA 159 Query: 207 LETI 210 L+++ Sbjct: 160 LKSL 163 >gi|254228662|ref|ZP_04922086.1| GTP-binding protein EngA [Vibrio sp. Ex25] gi|262395114|ref|YP_003286968.1| GTP-binding protein EngA [Vibrio sp. Ex25] gi|151938841|gb|EDN57675.1| GTP-binding protein EngA [Vibrio sp. Ex25] gi|262338708|gb|ACY52503.1| GTP-binding protein EngA [Vibrio sp. Ex25] Length = 498 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 206 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 258 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 259 YVLIDTAGVRRRGRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 316 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + ++ + + S++ G+ L ++ Sbjct: 317 LNAGRSIVIAVNKWDGLDSDVKESVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 374 Query: 206 ILETIN 211 I E N Sbjct: 375 IQEAYN 380 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 20/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQARLGEEHE-----FIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D + + L K Sbjct: 56 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFLVDGRAGLTPSDAAIAAHLRKI 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + ++ ++ +G+ L + Sbjct: 111 EKPAMLVVNKIDGIDADAACA---------DFWQLGVDDMYQIAAAHGRGVTALLE 157 >gi|325290811|ref|YP_004266992.1| iron-only hydrogenase maturation protein HydF [Syntrophobotulus glycolicus DSM 8271] gi|324966212|gb|ADY56991.1| iron-only hydrogenase maturation protein HydF [Syntrophobotulus glycolicus DSM 8271] Length = 417 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 22/195 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + PK I+ GR N GKSSLIN L N+ ++A S+ PG T + + Sbjct: 1 MQDTPKGSRLHISLFGRRNAGKSSLINALTNQ-DIALVSDVPGTTTDPVY-----KAMEI 54 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQI 137 + + L+D G +V S G L VR R L L++D G Sbjct: 55 LPIGPVMLIDTAGL-------DDVGSLGELRVR--KSRQVLDKTDVTLLVVDSGTGFGDF 105 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLS---PTTAQETLEKTKYL-IRNYPTAHPEVIPTSS 193 +++++ ++ + I+ KID ++ Q LE+T L ++N T+ P+ + SS Sbjct: 106 EKNIYDLCVERNIPVLIIFNKIDLINEDQKKALQNNLEQTYGLSLQNPQTSAPQALFVSS 165 Query: 194 VKRKGIEVLRKAILE 208 V ++GI L++ + + Sbjct: 166 VTKEGILQLKQNLSK 180 >gi|330894498|gb|EGH27159.1| GTP-binding protein Der [Pseudomonas syringae pv. mori str. 301020] Length = 490 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNEEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D ++P K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIALNKWDGMTPGERD--FVKIELERRLFFVDFADIHFISAMHGTGVGNL 357 Score = 97.9 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIKEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V KID + A+ P + IP + +GI + + Sbjct: 110 NKRSYVVANKIDNIDENLARAEFS---------PMGLGDAIPVAGAHGRGISQMLEI 157 >gi|260221255|emb|CBA29636.1| GTP-binding protein engA [Curvibacter putative symbiont of Hydra magnipapillata] Length = 445 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 14/188 (7%) Query: 25 PKAGPPEI---AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P+ P + A +GR NVGKS+LIN + + L + PG T+ + Sbjct: 172 PEPSDPSVIKLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDAI------SVPFER 224 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 LVD G + ++ + +V+ L + V LLID GV D + Sbjct: 225 EGQKFELVDTAGLRKKGKVFEAIEKFS--VVKTLQAIESASVVLLLIDAEQGVTDQDAHI 282 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ + + + + K D + Q L K R + S+ KR+G+ Sbjct: 283 AGYILESGRAVVVAVNKWDAID--EYQRELVKRSLETRLGFLKFAALHLISAKKRQGLGP 340 Query: 202 LRKAILET 209 L AI + Sbjct: 341 LWGAIAQA 348 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 68/185 (36%), Gaps = 26/185 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ G T+ + + N K+ ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKTRD-AIVADYAGLTRD------RHYGNGKHGKQEFIVI 55 Query: 90 DMPGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ K+ + + R G+ D D+ ++L Sbjct: 56 DTGGFEPDAGSGIFKEMAKQTRQAVAEADVVVFVVDA-------RAGLSAQDHDIGNYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K +V K E ++ L + EV P S+ +G+ L + Sbjct: 109 KLGKPCLVVANKA---------EGMKAGSQLAEFFELGLGEVFPVSAAHGQGMRSLIEMA 159 Query: 207 LETIN 211 L+ ++ Sbjct: 160 LDALH 164 >gi|226328000|ref|ZP_03803518.1| hypothetical protein PROPEN_01891 [Proteus penneri ATCC 35198] gi|225203704|gb|EEG86058.1| hypothetical protein PROPEN_01891 [Proteus penneri ATCC 35198] Length = 343 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 74/188 (39%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P P ++A GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 48 DFDPSTLPVKLAIVGRPNVGKSTLTNRMLGEDRVV-VYDMPGTTRDSIYI------PMER 100 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + ++D G K+ V+ + +++ L L+ID R G+ D + Sbjct: 101 DDKDYIIIDTAGVRKRGKVKETVEKFS--VIKTLQAIEDANVALLVIDAREGISDQDLSL 158 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 ++ S I + K D ++ ++ K ++ V S++ G+ Sbjct: 159 LGYILNAGRSLVIAVNKWDGMTQDDREQV--KAMLDLKLGFVDFARVHFISALHGSGVGN 216 Query: 202 LRKAILET 209 L ++I E Sbjct: 217 LFESIQEA 224 >gi|313125304|ref|YP_004035568.1| small GTP-binding protein domain [Halogeometricum borinquense DSM 11551] gi|312291669|gb|ADQ66129.1| small GTP-binding protein domain [Halogeometricum borinquense DSM 11551] Length = 206 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 26/191 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ GRSNVGKS+L+ L T PG T+ N F D+S K D Sbjct: 10 EVVLVGRSNVGKSTLMRELTGHSK-FTTGKKPGVTRQPNHF---DWSGEK-----FMFTD 60 Query: 91 MPGYGYARAPKK-NVDSWGGLIVRYLSERST--LRCVYL-----LIDC--RH-GVKQI-- 137 +PG+G+ ++ + IVRYL + L V + ++D RH G +I Sbjct: 61 LPGFGFMSGVEEHRREEIKTDIVRYLESNADDILAGVLVVDGKSVVDIIDRHSGPDEIPH 120 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVK 195 D ++F FL + V + + K+DK+ E L++ + P +VI K Sbjct: 121 DVEMFHFLRELGVPVVVAVNKMDKVD--DKDERLDELCDRLGLMPPWKQWSDVIAPICAK 178 Query: 196 RKGIEVLRKAI 206 R I+ L +++ Sbjct: 179 RGSIDPLYESL 189 >gi|229592437|ref|YP_002874556.1| GTP-binding protein EngA [Pseudomonas fluorescens SBW25] gi|229364303|emb|CAY52040.1| GTP-binding protein [Pseudomonas fluorescens SBW25] Length = 493 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 195 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDEPGTTRDSIYI------PFERNDEK 247 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 248 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 305 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I + K D ++P+ K + R + ++ S++ G+ L Sbjct: 306 LEAGRALVIAINKWDGMTPSERD--FVKIELQRRLFFVEFADIHFISALHGTGVGNL 360 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 60/171 (35%), Gaps = 21/171 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A + G T+ + K + + Sbjct: 6 VPVIALVGRPNVGKSTLFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYII 58 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L V L+D R G DQ + L K+ Sbjct: 59 VDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 113 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V KID + P A+ P + IP + +GI Sbjct: 114 NKRSYLVANKIDNIDPEQARAEFS---------PMGLGDAIPVAGAHGRGI 155 >gi|91225135|ref|ZP_01260357.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01] gi|269965174|ref|ZP_06179308.1| GTP-binding protein [Vibrio alginolyticus 40B] gi|91190078|gb|EAS76349.1| GTP-binding protein EngA [Vibrio alginolyticus 12G01] gi|269830160|gb|EEZ84387.1| GTP-binding protein [Vibrio alginolyticus 40B] Length = 498 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 206 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 258 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 259 YVLIDTAGVRRRGRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 316 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + ++ + + S++ G+ L ++ Sbjct: 317 LNAGRSIVIAVNKWDGLDSDVKESVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 374 Query: 206 ILETIN 211 I E N Sbjct: 375 IQEAYN 380 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 20/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQARLGEEHE-----FIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + + L K Sbjct: 56 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKI 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + ++ ++ +G+ L + Sbjct: 111 EKPAMLVVNKIDGIDADAACA---------DFWQLGVDDMYQIAAAHGRGVTALLE 157 >gi|303236880|ref|ZP_07323459.1| ribosome-associated GTPase EngA [Prevotella disiens FB035-09AN] gi|302483048|gb|EFL46064.1| ribosome-associated GTPase EngA [Prevotella disiens FB035-09AN] Length = 437 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 16/186 (8%) Query: 20 EIGLLPKAGP----PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + LP P A GR N GKSSLIN + + G T+ + Sbjct: 162 RMKDLPDENIEEEIPRFAVVGRPNAGKSSLINAFIGEDRN-IVTEIAGTTRDSIYTRYNK 220 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 F LVD G ++++ + + R + L+ID G++ Sbjct: 221 FG------FDFYLVDTAGIRRKNKVTEDLEFYSVM--RSIRSIENSDVCILMIDATRGIE 272 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSS 193 D ++F + + S +V+ K D + Q+ ++ + IR P +I S+ Sbjct: 273 AQDMNIFQLIQRNNKSLVVVVNKWDLVEDKD-QKVIKTFENAIRERMAPFVDFPIIFASA 331 Query: 194 VKRKGI 199 + ++ I Sbjct: 332 LTKQRI 337 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 57/167 (34%), Gaps = 20/167 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QSRRAIVSDTAGTTRDRQY------GKCQWNGREFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + + L V L+D G+ D+DV L + + Sbjct: 58 GG----WVVNSDDIFEDAIRKQVLVATEEADFVLFLVDNETGITDWDEDVAQILRRSKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +V K+D + Y + + S+ G Sbjct: 114 VILVANKVD---------NSGEYYMSAEFYRLGLGDPVCISAQTGSG 151 >gi|258619961|ref|ZP_05715001.1| GTP-binding protein [Vibrio mimicus VM573] gi|258627193|ref|ZP_05721981.1| GTP-binding protein [Vibrio mimicus VM603] gi|262165075|ref|ZP_06032812.1| GTP-binding protein EngA [Vibrio mimicus VM223] gi|262172166|ref|ZP_06039844.1| GTP-binding protein EngA [Vibrio mimicus MB-451] gi|258580495|gb|EEW05456.1| GTP-binding protein [Vibrio mimicus VM603] gi|258587694|gb|EEW12403.1| GTP-binding protein [Vibrio mimicus VM573] gi|261893242|gb|EEY39228.1| GTP-binding protein EngA [Vibrio mimicus MB-451] gi|262024791|gb|EEY43459.1| GTP-binding protein EngA [Vibrio mimicus VM223] Length = 494 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + +K + Sbjct: 202 QDLPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMKRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D R + D + F Sbjct: 255 YVLIDTAGVRRRKRINETVEKFS--VVKTLQAIEDANVVLLVVDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L+ + ++ + + S++ G+ L ++ Sbjct: 313 LNSGRSIVIAVNKWDGLNTDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGSEEGVETKMAQQS-----LAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + ++ ++ +G+ L I Sbjct: 110 EKPAILVVNKVDGIDADAASA---------EFWQLGMEQMYQIAAAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|328952198|ref|YP_004369532.1| GTP-binding protein engA [Desulfobacca acetoxidans DSM 11109] gi|328452522|gb|AEB08351.1| GTP-binding protein engA [Desulfobacca acetoxidans DSM 11109] Length = 449 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 67/181 (37%), Gaps = 21/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N L + A + PG T+ + ++ A L+ Sbjct: 3 PLVALIGRTNVGKSTLFNRLTRQSR-ALVDDQPGVTRDRLY------GDVTWEDHAFLLI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+G + + V ++D R ++ D +V +L + Sbjct: 56 DTGGFGDTEDALSSRVRQQAEL-----AAGEADLVLFMVDGRQEIQPDDLEVAQYLRRSG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KID T L Y + P S+ G+ L A++ Sbjct: 111 KPVLLVINKIDGPKQETR---------LPEFYRFGLTPLFPISAQHGLGVGSLLDAVVRY 161 Query: 210 I 210 + Sbjct: 162 L 162 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 79/202 (39%), Gaps = 14/202 (6%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +L P+ G P+ +A GR NVGKSS IN ++ + L S+ PG T+ Sbjct: 161 YLPAAPDAGEPPEG--IRVAVLGRPNVGKSSFINRVLGEERL-IVSDTPGTTRDAI---- 213 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L + L+D G +N++ G+I + L V LL+D + G Sbjct: 214 --DAPLIWDNRPYVLIDTAGIRRRSRIHQNLER--GMIWQALRALQRAEVVLLLLDAQEG 269 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + D + +F+ I + K D + + + + + ++ V+P S Sbjct: 270 LTEQDLRILNFIAVAGKGCLIGVNKWDVVGKDSQTQKAALDRLNMGLQLISYAPVLPLSV 329 Query: 194 VKRKGIEV---LRKAILETINY 212 + + L I + Sbjct: 330 LTGYQVSKVFPLLDEIYRQCQF 351 >gi|186682120|ref|YP_001865316.1| GTP-binding protein EngA [Nostoc punctiforme PCC 73102] gi|238691263|sp|B2J1L2|DER_NOSP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|186464572|gb|ACC80373.1| small GTP-binding protein [Nostoc punctiforme PCC 73102] Length = 456 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 13/191 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +P + +P+ ++A GR NVGKSSL+N V + A S G T+ + Sbjct: 165 IPAVEDIPETNEIKVAIVGRPNVGKSSLLNAFVGEER-AIVSPISGTTRDAI------DT 217 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G + + + + I R V L++D GV + Sbjct: 218 VIERDGQTYRLIDTAGIRKKKHIEYGTEFFS--INRAFKAIRRADVVLLVLDAVDGVTEQ 275 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVK 195 DQ + + ++ + IV+ K D + + T+ + + R + T E I S++ Sbjct: 276 DQKLAGRIIEEGRACIIVVNKWDAVEKDSY--TIYDYEKTLQSRLHFTEWAETIFVSALS 333 Query: 196 RKGIEVLRKAI 206 + +E + + + Sbjct: 334 GQRVEKILELV 344 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A + PG T+ + + N + Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLAGEQT-AIVHDEPGVTRD------RTYMPAFWNGREFLV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + ++D + G DQ++ ++ ++ Sbjct: 56 VDTGGLVFNDDTEFLPLIRQQAMT----ALAEACAAIFVVDGQTGPTSADQEIAEWMRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + Q ++ ++ + E P S++ G L ++ Sbjct: 112 RVPVLLAVNKC----ESPDQGLMQAAEF----WELGLGEPYPISAIHGSGTGELLDELVN 163 Query: 209 TI 210 I Sbjct: 164 HI 165 >gi|315634680|ref|ZP_07889964.1| ribosome-associated GTPase EngA [Aggregatibacter segnis ATCC 33393] gi|315476628|gb|EFU67376.1| ribosome-associated GTPase EngA [Aggregatibacter segnis ATCC 33393] Length = 512 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P +IA GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 216 EQTPDNQNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMER 268 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L ID R + D + Sbjct: 269 DGQNYTLIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSL 326 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D L+ + + V S++ G+ Sbjct: 327 LGFILNSGRSLVIVVNKWDGLNQEVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGN 384 Query: 202 LRKAILET 209 L +++ E Sbjct: 385 LFESVKEA 392 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAHLAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADIVLFLVDARAGLTSADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K+D + + + Y E+ ++ + +GI L + +L Sbjct: 112 NKTTVVVANKVDGIDADS---------HCAEFYQLGLGEIAQIAASQGRGIASLMEQVL 161 >gi|70732274|ref|YP_262030.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf-5] gi|123653208|sp|Q4K6V3|DER_PSEF5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|68346573|gb|AAY94179.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf-5] Length = 490 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 71/177 (40%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDQPGTTRDSIYI------PFERNDEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + P+ KT+ R + ++ S++ G+ L Sbjct: 303 LEAGRALVIALNKWDGMQPSERDYV--KTELQRRLFFVDFADIHFISALHGTGVGNL 357 Score = 98.3 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 60/171 (35%), Gaps = 21/171 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A + G T+ + K L Sbjct: 2 VPVIALVGRPNVGKSTLFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRTYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D + G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + ++ K+D + P A+ P + IP + +GI Sbjct: 110 NKTSYVIANKVDNIDPDMARAEFA---------PLGMGDAIPIAGAHGRGI 151 >gi|163802959|ref|ZP_02196846.1| GTP-binding protein Era [Vibrio sp. AND4] gi|159173249|gb|EDP58077.1| GTP-binding protein Era [Vibrio sp. AND4] Length = 320 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD------GDYQAIYVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V+ L+D H D+ V + L K Sbjct: 82 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTNDDEMVLTKLQKSNF 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + E ++ + + +V+P S+ K IEVLRK + + + Sbjct: 136 PVVLCVNKVDNV--QDRNEVMQHMMEMSKRMD--FVDVVPISAKHGKNIEVLRKHVRDHL 191 >gi|218887353|ref|YP_002436674.1| GTP-binding protein EngA [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758307|gb|ACL09206.1| small GTP-binding protein [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 506 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 26/200 (13%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 P LPK IA GR NVGKS+L N L+ R N A T + PG T+ + Sbjct: 10 SAPVTTHLPK-----IALVGRPNVGKSTLFNRLI-RANRAITHDRPGVTRDRMEGQVRS- 62 Query: 77 SNLKNNLPAMALVDMPGYGY------ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 A+VD G A P+ ++ + + + + L++D Sbjct: 63 ----RGKQTFAIVDTGGITLDAHAAVAEGPEGIRGFEAEILRQAEAAMAEAAGICLVVDG 118 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R G+ D+ + + L + +V+ K+D + ++ + ++P Sbjct: 119 RDGLTPFDEHLAAHLRRAGKPVLVVVNKVDGVERED---------EMLAEFHALGFPLLP 169 Query: 191 TSSVKRKGIEVLRKAILETI 210 S+ + VL + E + Sbjct: 170 VSAAHGHNVRVLEDEMREML 189 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 12/184 (6%) Query: 17 GVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 E P +A GR N GKSSL+N L ++ + S+ G T+ Sbjct: 229 SAAEPKGPPYDPTHLRLAMLGRPNAGKSSLVNALTGQQRM-IVSDMAGTTRDSV------ 281 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + ++ + VD G +V+ + + L + L++D GV Sbjct: 282 DVSFESGDKTITFVDTAGVRRRSRITDSVERYS--VNASLKSTTKAHVTLLVLDALQGVT 339 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 Q D+ + LD++ + +++ KID + + K ++ P H ++ S+ Sbjct: 340 QQDKRLVDLLDERKTPFMVLVNKIDLVPRKLLPDLEASFKGMLEFCP--HVPLLYVSAKS 397 Query: 196 RKGI 199 KG+ Sbjct: 398 GKGL 401 >gi|83647146|ref|YP_435581.1| GTP-binding protein EngA [Hahella chejuensis KCTC 2396] gi|123531965|sp|Q2SDW8|DER_HAHCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|83635189|gb|ABC31156.1| predicted GTPase [Hahella chejuensis KCTC 2396] Length = 472 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 I GR NVGKS+L+N L+ + + PG T+ + + Sbjct: 172 DDSGIRIGIIGRPNVGKSTLVNRLLGEDRVV-VFDQPGTTRDSVYI------PYERLGER 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + IV+ L V L++D R G+ D + F Sbjct: 225 YTLIDTAGVRRRKNVSEAVEKFS--IVKTLQAIKDAHVVVLVLDAREGIVDQDLHLLGFA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + + K D +S E + R + ++ S++ G+ L ++ Sbjct: 283 IEAGRALVLAINKWDGMSQDDKDEVRREIDR--RMGFVEYAQIHFISALHGTGVGHLYES 340 Query: 206 ILETIN 211 + E + Sbjct: 341 VHECFD 346 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + ++ A +N PG T+ + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRMTRSRD-AIVANLPGLTRDRKYGEGELEGKH------YIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + + + + V ++D + GV D+ + L + Sbjct: 56 DTGGI-----TGEEQGIDAAMAGQSFTAMNEADVVLFVVDAQAGVTPADEMIAKELRVRG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ KID + P A + E + T++ +G+ L + LE Sbjct: 111 KPTILVVNKIDGMQPEVAAA---------DFFAMGFQEYMYTAAAHNRGVRSLLEKALE 160 >gi|261335803|emb|CBH18797.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 655 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 19/168 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S +F++ L+ V + LP+ PE+ F G+ NVGKSS+I+ L+ L R Sbjct: 48 LSDEVFSRGNM-HLKNVDVVSALPEGLHSFPEVCFIGKPNVGKSSIISCLLRNPRLGRAG 106 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA---PKKNVDSWGGL--IVRY 114 G T+ L FF D A+ LVD PGYG + P+ + + RY Sbjct: 107 RVRGTTRLLQFFNVGD---------ALLLVDTPGYGGWKGRHLPQSVAERASAFAILFRY 157 Query: 115 LSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 L+ RS L+ VY +++ V+ D+++F FL + + + I+++K+D Sbjct: 158 LALRSKGPLKRVYWVMEATKPVQPRDEEIFVFLRNEQIPFSIIISKLD 205 >gi|74026378|ref|XP_829755.1| hypothetical protein [Trypanosoma brucei TREU927] gi|70835141|gb|EAN80643.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 655 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 19/168 (11%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S +F++ L+ V + LP+ PE+ F G+ NVGKSS+I+ L+ L R Sbjct: 48 LSDEVFSRGNM-HLKNVDVVSALPEGLHSFPEVCFIGKPNVGKSSIISCLLRNPRLGRAG 106 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA---PKKNVDSWGGL--IVRY 114 G T+ L FF D A+ LVD PGYG + P+ + + RY Sbjct: 107 RVRGTTRLLQFFNVGD---------ALLLVDTPGYGGWKGRHLPQSVAERASAFAILFRY 157 Query: 115 LSERST--LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 L+ RS L+ VY +++ V+ D+++F FL + + + I+++K+D Sbjct: 158 LALRSKGPLKRVYWVMEATKPVQPRDEEIFVFLRNEQIPFSIIISKLD 205 >gi|171059545|ref|YP_001791894.1| GTP-binding protein EngA [Leptothrix cholodnii SP-6] gi|238689085|sp|B1XXK9|DER_LEPCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|170776990|gb|ACB35129.1| small GTP-binding protein [Leptothrix cholodnii SP-6] Length = 448 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR NVGKS+LIN + + L + PG T+ VP + + K L A + Sbjct: 184 LAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRDAI-HVPFERGDKKYELIDTAGLRR 241 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + K +V V+ L S V LLID GV D + ++ + Sbjct: 242 KGKVFESIEKFSV-------VKTLQAISDANVVLLLIDATEGVSDQDAHIAGYVLDAGRA 294 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I + K D + + + + V+ S+ KR+G+ L KAI + Sbjct: 295 VVIAINKWDAIDSYQRETLQRSIEQRLA--FLKFAPVLMISAKKRQGLGPLWKAIDDA 350 Score = 94.8 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 26/176 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L R++ A ++ G T+ + + + K + ++ Sbjct: 3 PVIAIVGRPNVGKSTLFNRLTGRRD-AIVADFAGLTRD------RHYGDGKLDNHEFIVI 55 Query: 90 DMPGYGY---ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + K+ + + + R G+ D D+ +L Sbjct: 56 DTGGFEPDSTSGIYKEMAKQTRQAVAEADAVVFVVDV-------RAGLSAQDHDIARYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + K E ++ L Y E + SS +G+ L Sbjct: 109 ATGKRVLLAANKA---------EGMKDGPQLAEFYELGMGEPLAVSSAHGQGVRSL 155 >gi|114328959|ref|YP_746116.1| GTP-binding protein EngA [Granulibacter bethesdensis CGDNIH1] gi|114317133|gb|ABI63193.1| GTP-binding protein [Granulibacter bethesdensis CGDNIH1] Length = 483 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 72/189 (38%), Gaps = 20/189 (10%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P P +A +GR NVGKS+L N LV R+ +A ++ PG T+ + + Sbjct: 12 DEAPAERLPIVAIAGRPNVGKSTLFNRLVGRR-MALVADTPGVTRD------RKEAEAML 64 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G AP+ + G + + S V ++D R G+ D Sbjct: 65 RGRLVKLIDTAGLE--EAPQDTIA--GRMRQSSETAVSQADLVVFVVDARSGITPADTHF 120 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 S+L ++ +V K E + Y + + S+ GI Sbjct: 121 ASWLRRQNRPVLLVTNK---------AEARGAGAEALEAYRLGLGDPLAVSAEHGLGIAD 171 Query: 202 LRKAILETI 210 L + I + + Sbjct: 172 LMREIADRL 180 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 9/184 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P ++A GR N GKS+L+N L+ + T PG T+ D ++ Sbjct: 213 PPKPLKLAIVGRPNAGKSTLLNRLLGEDRV-ITGPEPGLTRDSISVTLSD------DIGE 265 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + LVD G ++++ + + V L +D G+ + D + + Sbjct: 266 IELVDTAGLRRRARIDESLEKMS--VSASIEALKMAEIVVLAVDATEGLHEQDLQIARLV 323 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +++ + LTK D + + V+ S + G++ L A Sbjct: 324 EREGRGAVLALTKWDAVEDRGKAARAISDRLETSLTQCRGIPVVTLSGLTGSGVQRLLPA 383 Query: 206 ILET 209 + E Sbjct: 384 VREA 387 >gi|153820092|ref|ZP_01972759.1| GTP-binding protein [Vibrio cholerae NCTC 8457] gi|126509362|gb|EAZ71956.1| GTP-binding protein [Vibrio cholerae NCTC 8457] Length = 129 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 1/107 (0%) Query: 103 NVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 W + YL +R +L+ + +L+D RH +K +DQ + + + + Q++LTK DKL Sbjct: 1 MKLKWQRALGEYLQKRQSLKGLVVLMDIRHPMKDLDQQLIIWAVECGIPVQVMLTKADKL 60 Query: 163 SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K + + + V SS+ G++ LR + E Sbjct: 61 KSGARKAQVLKVREEAKTF-GGDVAVDAFSSLSGIGVDTLRAKLDEW 106 >gi|320094216|ref|ZP_08026020.1| GTP-binding protein Era [Actinomyces sp. oral taxon 178 str. F0338] gi|319978841|gb|EFW10380.1| GTP-binding protein Era [Actinomyces sp. oral taxon 178 str. F0338] Length = 396 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 75/190 (39%), Gaps = 23/190 (12%) Query: 27 AGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 PE ++ GR NVGKS+L N LV +K +A TS P T+H + Sbjct: 93 PDYPEDFRAGFVSIVGRPNVGKSTLTNALVGQK-VAITSGRPETTRHNIRGIV------H 145 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + + LVD PGY R ++ L+E L D R G DQ Sbjct: 146 GDGYQLVLVDTPGYHRPRTLLGKR--LNDMVREALAE-VDAVLFCLPADQRIGPG--DQF 200 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + L V TK D + + L + L ++P SSV+ KGI+ Sbjct: 201 IARELRGVKRPVIAVATKCDAVGRERVMKHLLAIERL-----GEWSAIVPVSSVEGKGID 255 Query: 201 VLRKAILETI 210 LR + +T+ Sbjct: 256 HLRDVLAQTV 265 >gi|170723482|ref|YP_001751170.1| GTP-binding protein EngA [Pseudomonas putida W619] gi|229784138|sp|B1JDV4|DER_PSEPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169761485|gb|ACA74801.1| small GTP-binding protein [Pseudomonas putida W619] Length = 487 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 69/177 (38%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + PG T+ + + + Sbjct: 189 EKDGIKIAIIGRPNVGKSTLVNRMLGEERVV-VYDQPGTTRDSIYI------PFERDNEK 241 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 242 YTFIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 299 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + KT+ R + ++ S++ G+ L Sbjct: 300 LEAGRAIVIALNKWDGMESGERDYV--KTELERRLFFVDFADIHFISALHGTGVGHL 354 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 68/182 (37%), Gaps = 21/182 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N L ++ A + G T+ + + + L Sbjct: 2 VPVIALVGRPNVGKSTMFNRLTKTRD-AIVGDLSGLTRDRQY------GDASWQGRSFIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G V + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI-----TGDEVGMDEKMAEQSLMAIEEADYVLFLVDARAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 S +V KID + A+ P IP + + +GI L +++L Sbjct: 110 NKSAILVANKIDNIDADVARAEFS---------PLGMGNAIPVAGSQGRGINQLMESVLG 160 Query: 209 TI 210 I Sbjct: 161 HI 162 >gi|50085654|ref|YP_047164.1| GTP-binding protein Era [Acinetobacter sp. ADP1] gi|49531630|emb|CAG69342.1| GTP-binding protein,16S rRNA-binding, ribosome-associated GTPase [Acinetobacter sp. ADP1] Length = 345 Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 45 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIVGIDS------REKSQAVYVDT 97 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V ++D H Q D V L + Sbjct: 98 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVVDI-HKWTQNDDLVLEKLKNAEM 151 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D L + L + + + N+ E+IP S+++ ++ LR + + + Sbjct: 152 PVILVINKVDTLEDKKSLLPLIQERTKLMNFA----EIIPVSALRGANLDQLRDTVEKYL 207 >gi|312962901|ref|ZP_07777388.1| GTP-binding protein EngA [Pseudomonas fluorescens WH6] gi|311282928|gb|EFQ61522.1| GTP-binding protein EngA [Pseudomonas fluorescens WH6] Length = 489 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 191 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDQPGTTRDSIYI------PFERNDEK 243 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 244 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 301 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I + K D ++P+ K + R + ++ S++ G+ L Sbjct: 302 LEAGRALVIAINKWDGMTPSERD--FVKIELQRRLFFVEFADIHFISALHGTGVGNL 356 Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 62/177 (35%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A + G T+ + K + + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L V L+D R G DQ + L K+ Sbjct: 55 VDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDARAGYTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ KID + P A+ P + IP + +GI + + Sbjct: 110 NKRSYLIANKIDNIDPEQARAEFS---------PMGLGDAIPIAGAHGRGITQMLEV 157 >gi|222110307|ref|YP_002552571.1| gtp-binding protein enga [Acidovorax ebreus TPSY] gi|254783151|sp|B9MFY0|DER_ACIET RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|221729751|gb|ACM32571.1| Miro domain protein [Acidovorax ebreus TPSY] Length = 447 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 11/182 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 +A +GR NVGKS+LIN + + L + PG T+ + N Sbjct: 178 NVIRLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDAI------SVPFERNGQKFE 230 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G + ++ + +V+ L + V LL+D GV D + ++ + Sbjct: 231 LIDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILE 288 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + I + K D + Q+ + + + S+ KR+GI L +I+ Sbjct: 289 SGRAVVIAVNKWDAVDDYGRQQLERSIETRLS--FLKFAPLHFISAKKRQGIGPLWSSII 346 Query: 208 ET 209 + Sbjct: 347 QA 348 Score = 91.0 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 63/176 (35%), Gaps = 26/176 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ G T+ + + N + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGNGRQGKHEYIVI 55 Query: 90 DMPGYGY---ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + ++ + + R G+ D D+ ++L Sbjct: 56 DTGGFEPDASSGIYREMARQTQQAVAEADVVVFVVDV-------RGGLSAQDHDIANYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + K E ++ + +L Y EV P S+ +G+ L Sbjct: 109 RLGKPCVLAGNKA---------EGMQDSMHLAEFYELGLGEVHPVSAAHGQGVRSL 155 >gi|302895911|ref|XP_003046836.1| hypothetical protein NECHADRAFT_76919 [Nectria haematococca mpVI 77-13-4] gi|256727763|gb|EEU41123.1| hypothetical protein NECHADRAFT_76919 [Nectria haematococca mpVI 77-13-4] Length = 441 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 63/238 (26%), Positives = 87/238 (36%), Gaps = 37/238 (15%) Query: 7 FTKSAWIFLRGVP-EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRT 65 F + L P I PEI G SN GKS +N LV LA+ S G+T Sbjct: 179 FFQEPSELLYSAPSHIDHKENDLIPEIVIVGASNAGKSHFLNALVGDFRLAKVSYRAGKT 238 Query: 66 QHLNFFVPKDFSNLKNNL---------PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS 116 +N + + L ++ L+D PGYGY SWG IV+YL Sbjct: 239 TTMNAYGVGPRPKIAPELIRKGDAPPKHSLVLMDTPGYGYRS-----KASWGDTIVKYLI 293 Query: 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETL---EK 173 R TLR +LI +D + L + +V+TK DK E L E+ Sbjct: 294 HRKTLRGAVILIPADKDNYGLDTWMLKTLARTMTRTLVVITKTDKCGEEWPTECLALSEE 353 Query: 174 TKYLIRNYPTAHP-----------EVIPTSS--------VKRKGIEVLRKAILETINY 212 + + P + T++ GI +R AILE Y Sbjct: 354 IEKELERQDRLAPGKWREGSERITSIYATAAGMKTQRRMGNGAGIGGVRLAILELAGY 411 >gi|317051076|ref|YP_004112192.1| ribosome-associated GTPase EngA [Desulfurispirillum indicum S5] gi|316946160|gb|ADU65636.1| ribosome-associated GTPase EngA [Desulfurispirillum indicum S5] Length = 457 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 19/179 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N + +K +A + PG T+ N+ +++ +V Sbjct: 5 PIVCIIGRPNVGKSTLFNRIA-KKRIAIVEDIPGVTRDRNYH------DVEWEDKEFTIV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ ++ + + V L+D + G D + L + Sbjct: 58 DTGGFESETGKGSLE---ASMVEQTGIAAAEADRVIFLLDGQTGPIADDFAIMDMLRRHE 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 I + KID K L+ Y EV P S+ +G++ L + E Sbjct: 115 KPVYIAVNKID---------APSHEKILLDFYQLGVDEVFPVSAAHGRGVDDLLDTVTE 164 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 10/178 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKSSL+N + + S PG T+ + ++ Sbjct: 181 DSIPIKVAIVGRPNVGKSSLVNKICGENRVV-ASEVPGTTRDTIH------TPVRREGRD 233 Query: 86 MALVDMPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G ++A +N++ + R ++ V L++D G+ D V S+ Sbjct: 234 FILLDTAGIRRKSKAYSENLERYSVF--RSITAIEEAHVVILMLDATEGITDQDLKVASY 291 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + I + K D ++ T + R + P ++ S++ + + L Sbjct: 292 AWEAGKPIIIAVNKWDLVAKETMTYREFEKDIEHRFKFSTKPIILFISALSGQRVVKL 349 >gi|257453876|ref|ZP_05619154.1| ribosome-associated GTPase EngA [Enhydrobacter aerosaccus SK60] gi|257448803|gb|EEV23768.1| ribosome-associated GTPase EngA [Enhydrobacter aerosaccus SK60] Length = 467 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 70/176 (39%), Gaps = 11/176 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 IA GR NVGKS+L+N L+ + + + PG T+ + + + Sbjct: 174 PDGLRIAIIGRPNVGKSTLVNRLLGEERVV-VFDMPGTTRDSIYI------PYERDNRHY 226 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + V+ + +V+ L V ++ID + G+ D ++ + Sbjct: 227 VLIDTAGVRRRGRIDEKVEKFS--VVKTLQAIKDAHVVIVVIDAQEGITDQDLNLLGYAL 284 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + + K D L Q+ K + R + +V S++ G+ L Sbjct: 285 EAGRAMVLAINKWDGLDQD--QKNFVKIEMDRRFNFIPYVKVHLISALHGTGVGNL 338 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 29/182 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L R A ++ G T+ + + + ++ Sbjct: 3 PVVALIGRPNVGKSTLFNQLT-RSRQALVADLAGLTRDRQY------GDATFEEKSFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G G VD G I Y+S +S + ++D R G+ D+ + Sbjct: 56 DTGGIG-------EVDEGDGTIDDYMSHQSHTAIHEADIIVFVVDSRAGITGADEVIAKQ 108 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + K+D + E Y E P ++ +G+ L + Sbjct: 109 LHTLGKPVFLAANKMDGVHEAAIHE----------FYALGFGEPFPMAASHGRGVGNLLE 158 Query: 205 AI 206 A+ Sbjct: 159 AV 160 >gi|332527857|ref|ZP_08403894.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2] gi|332112434|gb|EGJ12227.1| GTP-binding protein Der [Rubrivivax benzoatilyticus JA2] Length = 447 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 12/184 (6%) Query: 25 PKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P A P +A +GR NVGKS+LIN + + L + PG T+ +L+ Sbjct: 175 PDADAPIRLAVAGRPNVGKSTLINAWLGEERLV-AFDQPGTTRDAI------KVSLEREG 227 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G + ++ + +V+ L + V L++D GV + D + Sbjct: 228 RRFELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIADANVVVLMVDATVGVSEQDAHIAG 285 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + + + L K D Q+ + + ++ S+ KR G+ L Sbjct: 286 YVLESGRAVVLALNKWDATDEYQRQQLQRSIESRLA--FLKFAPLLQISAKKRTGLTALW 343 Query: 204 KAIL 207 KAIL Sbjct: 344 KAIL 347 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 70/183 (38%), Gaps = 20/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + + A ++ G T+ + + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRIT-KSRDAIVADFAGLTRD------RHYGDARLGGREFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + + + + V + D R GV D D+ FL + Sbjct: 56 DTGGFEPEKPSGVVAE----MAKQTRQAVAEADVVVFVADLRAGVSAQDHDIARFLRTQQ 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K E + ++ L + E P S+ +G+ L +A LE Sbjct: 112 KKVILAVNKA---------EGMAESPLLAEFHELGIGEPHPLSASHGQGVRSLLEAALED 162 Query: 210 INY 212 ++ Sbjct: 163 FDF 165 >gi|86145598|ref|ZP_01063928.1| GTP-binding protein EngA [Vibrio sp. MED222] gi|85836569|gb|EAQ54695.1| GTP-binding protein EngA [Vibrio sp. MED222] Length = 493 Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 202 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMQRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V LLID R + D + F Sbjct: 255 YVLIDTAGVRRRKNINETVEKFS--VVKTLKAIEDANVVLLLIDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L ++ + + S++ G+ L ++ Sbjct: 313 LNAGRSIVIAVNKWDGLDNDVKDRVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 12/139 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHFSEHDFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQL 109 Query: 149 AVSYQIVLTKIDKLSPTTA 167 +V+ K+D + P A Sbjct: 110 EKPSMLVVNKVDGIDPDAA 128 >gi|229824833|ref|ZP_04450902.1| hypothetical protein GCWU000182_00182 [Abiotrophia defectiva ATCC 49176] gi|229790836|gb|EEP26950.1| hypothetical protein GCWU000182_00182 [Abiotrophia defectiva ATCC 49176] Length = 445 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 20/201 (9%) Query: 21 IGLLPKAGP-------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 I P+ P P+IA G+ NVGKSS+IN L+ + S+ G T+ Sbjct: 161 IKHFPEDSPEAEEDDTPKIAIIGKPNVGKSSIINRLLGENRV-IVSDVAGTTRDAI---- 215 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + ++ N ++D G K++++ + IVR +S V L+ID G Sbjct: 216 --DTRIRRNGKDYIMIDTAGIRRKSRIKEDIEYYS--IVRTVSAVERADIVVLVIDATEG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA--QETLEKTKYLIRNYPTAHPEVIPT 191 + + D + ++ + + K D + T E +K K ++ P A E + Sbjct: 272 ITEQDAKIAGIAHERGKGIIVAVNKWDLIEKTDKTMNEHTKKLKEILAYMPYA--EFLFI 329 Query: 192 SSVKRKGIEVLRKAILETINY 212 S+V + + L I I Y Sbjct: 330 SAVSGQRLNKLFDLIDVVIQY 350 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 69/180 (38%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L +++ + PG T+ + ++ + A ++ Sbjct: 3 PIVAIVGRPNVGKSTLFNKLAG-SDISIVKDTPGVTRDRIY------ADAEWLNKAFTMI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + T + + D + G+ D V L K Sbjct: 56 DTGGI----EPDTSDMMLANMREQAEIAIDTADVIIFITDVKTGLVDSDNQVAHMLRKSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D +++ + Y E P SSV + GI + +++ Sbjct: 112 KPVVLVVNKVD--------NPVKQQADVYEFYNLGLGEPFPISSVNQTGIGDMLDEVIKH 163 >gi|285018364|ref|YP_003376075.1| GTP-binding protein enga [Xanthomonas albilineans GPE PC73] gi|283473582|emb|CBA16085.1| probable gtp-binding protein enga [Xanthomonas albilineans] Length = 465 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 G IAF GR NVGKS+L+N L+ + + S+ PG T+ +L+ + Sbjct: 175 DPGRMRIAFVGRPNVGKSTLVNRLLGEERM-IASDVPGTTRDSI------AVDLERDDRP 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L LL+D GV D V + Sbjct: 228 YRLIDTAGLRRRGRVEEAVEKFSVF--KTLQAIEQCEVAVLLLDASEGVTDQDASVLGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D L+ ++ + P A E + S+ G+ L +A Sbjct: 286 LDAGRALVVAVNKWDGLTDYQREQAEALLSRKLGFVPWA--EAVRISAKHGSGLRELFRA 343 Query: 206 I 206 I Sbjct: 344 I 344 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + + Sbjct: 2 LPLVALVGRPNVGKSTLFNALTRSRD-ALVHDQPGVTRDRHYGVCR-----LQPETPFVI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + G + + V ++D R G +D ++ S+L K Sbjct: 56 VDTGGI-----SGEEEGLAGATASQARAAAGEADLVLFVVDGREGASSLDDEILSWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 A +++ KID + + E I S+ R+GI+ L +L Sbjct: 111 ARPTILLINKIDGTDEDQVRAEFARY---------GLGEAIAVSAAHRQGIDDLLDHVLA 161 Query: 209 TI 210 + Sbjct: 162 RL 163 >gi|261403536|ref|YP_003247760.1| GTP-binding protein HSR1-releated protein [Methanocaldococcus vulcanius M7] gi|261370529|gb|ACX73278.1| GTP-binding protein HSR1-releated protein [Methanocaldococcus vulcanius M7] Length = 216 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 26/191 (13%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GRSNVGKS+ + ++ RK++ + PG T +N + D+ LVD+PG+G Sbjct: 27 GRSNVGKSTFVRLMTGRKDV-KVGKRPGLTLKINEYDLGDY----------ILVDLPGFG 75 Query: 96 YARA-PKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-----------HGVKQIDQDVF 142 Y PK + IV Y+ + + +ID + G ID ++F Sbjct: 76 YMSGLPKNVQEKIKDEIVHYIENNADKIATAVQIIDAKSFFEIVRRWDERGEIPIDLEMF 135 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIE 200 F+ +S +V+ K+DK+ L+ + P ++P K +GI+ Sbjct: 136 DFITDLKISPILVVNKMDKIKKEDWDTVLDGICEFFKCSPPWRQWKFIVPAVLKKGQGID 195 Query: 201 VLRKAILETIN 211 ++K I E ++ Sbjct: 196 EIKKRIKERVD 206 >gi|218708645|ref|YP_002416266.1| GTP-binding protein EngA [Vibrio splendidus LGP32] gi|254783178|sp|B7VJU2|DER_VIBSL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218321664|emb|CAV17618.1| GTP-binding protein engA [Vibrio splendidus LGP32] Length = 493 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 202 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMQRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V LLID R + D + F Sbjct: 255 YVLIDTAGVRRRKNINETVEKFS--VVKTLKAIEDANVVLLLIDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L ++ + + S++ G+ L ++ Sbjct: 313 LNAGRSIVIAVNKWDGLDNDVKDRVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 12/139 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHFSEHDFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQL 109 Query: 149 AVSYQIVLTKIDKLSPTTA 167 +V+ K+D + P A Sbjct: 110 EKPSMLVVNKVDGIDPDAA 128 >gi|27364935|ref|NP_760463.1| GTPase Era [Vibrio vulnificus CMCP6] gi|37681014|ref|NP_935623.1| GTP-binding protein Era [Vibrio vulnificus YJ016] gi|320155321|ref|YP_004187700.1| GTP-binding protein Era [Vibrio vulnificus MO6-24/O] gi|31340056|sp|Q8DC75|ERA_VIBVU RecName: Full=GTPase Era gi|61212428|sp|Q7MHN9|ERA_VIBVY RecName: Full=GTPase Era gi|27361081|gb|AAO09990.1| GTP-binding protein Era [Vibrio vulnificus CMCP6] gi|37199764|dbj|BAC95594.1| GTP-binding protein Era [Vibrio vulnificus YJ016] gi|319930633|gb|ADV85497.1| GTP-binding protein Era [Vibrio vulnificus MO6-24/O] Length = 320 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD------GDYQAIYVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V+ L+D H D+ V + L K Sbjct: 82 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTNDDEMVLNKLQKANF 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + E ++ + + +V+P S+ + K I+VLRK + + + Sbjct: 136 PVVLCVNKVDNV--QDRNEVMQHMMEMSKK--MNFVDVVPISAKQGKNIDVLRKHVRDHL 191 >gi|325283649|ref|YP_004256190.1| GTP-binding protein engA [Deinococcus proteolyticus MRP] gi|324315458|gb|ADY26573.1| GTP-binding protein engA [Deinococcus proteolyticus MRP] Length = 441 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 70/181 (38%), Gaps = 24/181 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL N L+ R+ A ++ PG T+ ++ N+ LVD Sbjct: 3 KVAIVGRPNVGKSSLFNRLIGRRE-AVVADFPGVTRDAK----EEIMLYHNHRIT--LVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G D W +I V ++D R G+ D +V +L + Sbjct: 56 TGGLWSG-------DEWEAVIREKAEWALEGADAVIFVLDPRDGLSAADYEVADWLRRLG 108 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V KID YL + E + S+ +G++ L I+E Sbjct: 109 RPVVVVANKIDSPKHEP---------YLAELWALGFGEPVAISAEHARGLDDLMDRIMEH 159 Query: 210 I 210 + Sbjct: 160 L 160 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 21/192 (10%) Query: 21 IGLLP--KAGPPEIA-----FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP + E+A GR NVGKSSL+N + + + A ++ PG T+ + V Sbjct: 157 MEHLPADEGDVSEVAPIRISLIGRPNVGKSSLLNAIT-QSDRAIVADVPGTTRD-SLDVE 214 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D+ + LVD G + P ++ + + ERS L + L D Sbjct: 215 WDYGGQR-----FVLVDTAGIR--KKPDTAIEDYAIQRSQAAIERSDLIWLVLNAD---D 264 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + + + +V+ K D + + ++ + + A+ + TS+ Sbjct: 265 LGDHELKLANLAYDSGKPVIVVVNKWDLVPDEDLKRAEKELDQKL--FHIAYAPRVYTSA 322 Query: 194 VKRKGIEVLRKA 205 + GI + Sbjct: 323 INDYGIHDMLAE 334 >gi|187778884|ref|ZP_02995357.1| hypothetical protein CLOSPO_02479 [Clostridium sporogenes ATCC 15579] gi|187772509|gb|EDU36311.1| hypothetical protein CLOSPO_02479 [Clostridium sporogenes ATCC 15579] Length = 439 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 15/175 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLP 84 + IAF G+ NVGKSSLIN L+ + L SN PG T+ ++ +V DF Sbjct: 173 EDERINIAFVGKPNVGKSSLINKLLGEERL-IVSNIPGTTRDSIDSYVNTDFGE------ 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G K+ ++ + +I Y + L+ID G+ + DQ + + Sbjct: 226 -FTLIDTAGLRRKSKVKEEIERY-SVIRTY-ASIERADVCILMIDATEGISEQDQKIIGY 282 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR--NYPTAHPEVIPTSSVKRK 197 + +++ K D + +T++K K ++ A+ + + S+ + Sbjct: 283 AHDLNKAILVIVNKWDLVEKDD--KTMDKFKKELKVNLSFMAYAKYLFISAKTGQ 335 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVQDTPGVTRDRI-YAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + + L+D + G+ D++V L K Sbjct: 55 MIDTGGI----EPESEDIIISQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KIDKL Y + + SS + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDKLKDED---------NAYEFYNLGIGDPVTISSSQALGLGDMLDRVV 161 Query: 208 ET 209 E Sbjct: 162 EH 163 >gi|153828302|ref|ZP_01980969.1| GTP-binding protein [Vibrio cholerae 623-39] gi|254285481|ref|ZP_04960445.1| GTP-binding protein [Vibrio cholerae AM-19226] gi|148876256|gb|EDL74391.1| GTP-binding protein [Vibrio cholerae 623-39] gi|150424343|gb|EDN16280.1| GTP-binding protein [Vibrio cholerae AM-19226] Length = 494 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + +K + Sbjct: 202 QDLPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMKRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D R + D + F Sbjct: 255 YVLIDTAGVRRRKRINETVEKFS--VVKTLQAIEDANVVLLVVDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D LS + ++ + + S++ G+ L ++ Sbjct: 313 LNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGSEEGVETKMAQQS-----LAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + ++ ++ +G+ L I Sbjct: 110 EKPAILVVNKVDGIDADAASA---------EFWQLGMDQMYQIAAAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|322370029|ref|ZP_08044591.1| GTP-binding protein [Haladaptatus paucihalophilus DX253] gi|320550365|gb|EFW92017.1| GTP-binding protein [Haladaptatus paucihalophilus DX253] Length = 206 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 29/197 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ F GRSNVGKS+L+ L T PG T+ N F D+++ L D Sbjct: 11 EVVFVGRSNVGKSTLMRELTGHS--FETGGKPGVTRQPNHF---DWAS-----EDFMLTD 60 Query: 91 MPGYGYAR-APKKNVDSWGGLIVRYLSERST----------LRCVYLLIDCRHGVKQI-- 137 +PG+G+ + + IV Y+ E + + V +ID G +I Sbjct: 61 LPGFGFMSGVEEDRRERIKTDIVEYIEENAERVLVGVLVVDGKSVIDIIDRHSGEDEIPH 120 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSV 194 D ++F FL + + + + K+DK+ E L + +P + P S+ Sbjct: 121 DVEMFYFLREVGIPVVVAVNKMDKVDDED--ERLNDLCDRLGLHPPWKQWQDTIAPISA- 177 Query: 195 KRKGIEVLRKAILETIN 211 KR I+ L +A+ ++ Sbjct: 178 KRGNIDALNEAVKTHLH 194 >gi|269960404|ref|ZP_06174777.1| GTP-binding protein [Vibrio harveyi 1DA3] gi|269834831|gb|EEZ88917.1| GTP-binding protein [Vibrio harveyi 1DA3] Length = 320 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD------GDYQAIYVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V+ L+D H + D+ V + L K Sbjct: 82 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTKDDEMVLTKLQKSNF 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + E + + + +V+P S+ + K I+VLRK + + + Sbjct: 136 PVVLCVNKVDNV--QDRNEVMMHMADMSKKMD--FVDVVPISAKQGKNIDVLRKHVRDHL 191 >gi|197302999|ref|ZP_03168047.1| hypothetical protein RUMLAC_01725 [Ruminococcus lactaris ATCC 29176] gi|197297854|gb|EDY32406.1| hypothetical protein RUMLAC_01725 [Ruminococcus lactaris ATCC 29176] Length = 442 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A G+ NVGKSS+IN L+ + S+ G T+ + + +N Sbjct: 174 DDDRPRVAIVGKPNVGKSSIINRLLGENRV-IVSDIAGTTRDAI------DTEIVHNGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R +S V ++ID GV + D + Sbjct: 227 YVFIDTAGLRRKNKIKEELERYS--IIRTVSAVERADVVLMVIDATEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 ++ IV+ K D + +T+ + + IR + P E++ S++ + + L Sbjct: 285 HERGKGVIIVVNKWDAIEKND--KTMREYEAKIRQVLSYMPYAEIMYVSAMTGQRLPKLY 342 Query: 204 KAI 206 I Sbjct: 343 DMI 345 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 64/178 (35%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + +++ L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGE-MISIVKDTPGVTRDRIY------ADVDWLDREFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + T + + D + G+ D V L + Sbjct: 57 DTGGI----EPDSRDIILSQMREQAQIAIDTADVIIFITDVKQGLVDSDSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D + Y + IP S+ R G+ + A++ Sbjct: 113 KPVVLVVNKVDNFDK--------YMADVYEFYNLGIGDPIPISAASRLGLGDMLDAVI 162 >gi|330807651|ref|YP_004352113.1| GTP-binding protein engA [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375759|gb|AEA67109.1| GTP-binding protein engA [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 490 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDQPGTTRDSIYI------PFERNEEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I + K D ++P+ K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIAINKWDGMTPSERD--FVKIELQRRLFFVDFADIHFISALHGTGVGNL 357 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 64/181 (35%), Gaps = 21/181 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A + G T+ + K L Sbjct: 2 VPVIALVGRPNVGKSTLFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRTYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L V L+D + G DQ + L K+ Sbjct: 55 VDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D + P A+ P + IP + +GI + K LE Sbjct: 110 NKRSYVVANKVDNIDPDMARAEFA---------PLGMGQAIPIAGAHGRGITQMLKIALE 160 Query: 209 T 209 + Sbjct: 161 S 161 >gi|261867584|ref|YP_003255506.1| GTP-binding protein EngA [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412916|gb|ACX82287.1| GTP-binding protein EngA [Aggregatibacter actinomycetemcomitans D11S-1] Length = 510 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 67/188 (35%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P +IA GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 214 EQTPDKKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSIYI------PMER 266 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R + D + Sbjct: 267 DNQDYTLIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLVIDARENISDQDLSL 324 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D L + + V S++ G+ Sbjct: 325 LGFILNAGRSLVIVVNKWDGLDTEVKNRVKSELDRRLD--FIDFARVHFISALHGSGVGN 382 Query: 202 LRKAILET 209 L +I E Sbjct: 383 LFDSIKEA 390 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 13/135 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHLAGHDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADIVLFLVDARAGLTSADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 112 NKTTVVVANKVDGID 126 >gi|262374928|ref|ZP_06068162.1| ribosome-associated GTPase EngA [Acinetobacter lwoffii SH145] gi|262309941|gb|EEY91070.1| ribosome-associated GTPase EngA [Acinetobacter lwoffii SH145] Length = 469 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 76/191 (39%), Gaps = 20/191 (10%) Query: 21 IGLLPKAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + +P+ PE +A GR NVGKS+L+N L+ + + + PG T+ + Sbjct: 159 LADVPEDENPEEHDKNTGLRLAIIGRPNVGKSTLVNRLLGEERVV-AFDQPGTTRDSIYI 217 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + + L+D G + ++ + IV+ L + +++D R Sbjct: 218 ------PFERDGRQYTLIDTAGVRRKGKVDEMIEKFS--IVKTLQAMKDANVIVVVVDAR 269 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G+ + D + + + + I + K D ++ ++ + P A +V Sbjct: 270 DGIVEQDLHLIGYALEAGRAMVIAVNKWDNMTEYDRKQCKLDVERRFDFIPWA--KVHLI 327 Query: 192 SSVKRKGIEVL 202 S++ G+ L Sbjct: 328 SALHGTGVGDL 338 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 65/178 (36%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + + A ++ G T+ + + + +V Sbjct: 3 PVIALIGRPNVGKSTLFNQIT-KSRDALVADFAGLTRDRKY------GDATYQNKSFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G + + + + ++D R G+ D+ + L Sbjct: 56 DTGGIGENEGGID-----SYMAEQSKTAIHEADIIIFVVDARAGLLASDEQIARELRTLG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K+D + A L+ Y E + ++ +G++ + + +L Sbjct: 111 KKVFLVANKVDGVHAEAA---------LVEFYKLGMGEPLQVAASHGRGVQQMLEDVL 159 >gi|15640782|ref|NP_230412.1| GTP-binding protein EngA [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585667|ref|ZP_01675462.1| GTP-binding protein [Vibrio cholerae 2740-80] gi|121726039|ref|ZP_01679338.1| GTP-binding protein [Vibrio cholerae V52] gi|147675115|ref|YP_001216248.1| GTP-binding protein EngA [Vibrio cholerae O395] gi|153817276|ref|ZP_01969943.1| GTP-binding protein [Vibrio cholerae NCTC 8457] gi|153821375|ref|ZP_01974042.1| GTP-binding protein [Vibrio cholerae B33] gi|227080942|ref|YP_002809493.1| GTP-binding protein [Vibrio cholerae M66-2] gi|229505623|ref|ZP_04395133.1| GTP-binding protein EngA [Vibrio cholerae BX 330286] gi|229510705|ref|ZP_04400184.1| GTP-binding protein EngA [Vibrio cholerae B33] gi|229517827|ref|ZP_04407271.1| GTP-binding protein EngA [Vibrio cholerae RC9] gi|229608641|ref|YP_002879289.1| GTP-binding protein EngA [Vibrio cholerae MJ-1236] gi|254847900|ref|ZP_05237250.1| GTP-binding protein EngA [Vibrio cholerae MO10] gi|255744569|ref|ZP_05418520.1| GTP-binding protein EngA [Vibrio cholera CIRS 101] gi|262161296|ref|ZP_06030407.1| GTP-binding protein EngA [Vibrio cholerae INDRE 91/1] gi|262168789|ref|ZP_06036484.1| GTP-binding protein EngA [Vibrio cholerae RC27] gi|298499104|ref|ZP_07008911.1| ribosome-associated GTPase EngA [Vibrio cholerae MAK 757] gi|26006742|sp|Q9KTW7|DER_VIBCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|172047436|sp|A5F3E6|DER_VIBC3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783177|sp|C3LT16|DER_VIBCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|9655209|gb|AAF93928.1| GTP-binding protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550030|gb|EAX60046.1| GTP-binding protein [Vibrio cholerae 2740-80] gi|121631521|gb|EAX63891.1| GTP-binding protein [Vibrio cholerae V52] gi|126512192|gb|EAZ74786.1| GTP-binding protein [Vibrio cholerae NCTC 8457] gi|126521085|gb|EAZ78308.1| GTP-binding protein [Vibrio cholerae B33] gi|146316998|gb|ABQ21537.1| GTP-binding protein [Vibrio cholerae O395] gi|227008830|gb|ACP05042.1| GTP-binding protein [Vibrio cholerae M66-2] gi|227012587|gb|ACP08797.1| GTP-binding protein [Vibrio cholerae O395] gi|229344542|gb|EEO09516.1| GTP-binding protein EngA [Vibrio cholerae RC9] gi|229350670|gb|EEO15611.1| GTP-binding protein EngA [Vibrio cholerae B33] gi|229357846|gb|EEO22763.1| GTP-binding protein EngA [Vibrio cholerae BX 330286] gi|229371296|gb|ACQ61719.1| GTP-binding protein EngA [Vibrio cholerae MJ-1236] gi|254843605|gb|EET22019.1| GTP-binding protein EngA [Vibrio cholerae MO10] gi|255737600|gb|EET92994.1| GTP-binding protein EngA [Vibrio cholera CIRS 101] gi|262022907|gb|EEY41613.1| GTP-binding protein EngA [Vibrio cholerae RC27] gi|262029046|gb|EEY47699.1| GTP-binding protein EngA [Vibrio cholerae INDRE 91/1] gi|297543437|gb|EFH79487.1| ribosome-associated GTPase EngA [Vibrio cholerae MAK 757] Length = 494 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + +K + Sbjct: 202 QDLPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMKRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D R + D + F Sbjct: 255 YVLIDTAGVRRRKRINETVEKFS--VVKTLQAIEDANVVLLVVDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D LS + ++ + + S++ G+ L ++ Sbjct: 313 LNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGSEEGVETKMAQQS-----LAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D + A + ++ ++ +G+ L +L Sbjct: 110 EKPAILVVNKVDGIDADAASA---------EFWQLGMDQMYQIAAAHGRGVGALIDRVL 159 >gi|320353154|ref|YP_004194493.1| ribosome-associated GTPase EngA [Desulfobulbus propionicus DSM 2032] gi|320121656|gb|ADW17202.1| ribosome-associated GTPase EngA [Desulfobulbus propionicus DSM 2032] Length = 445 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 10/183 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP IAF GR NVGKSS++N ++ ++ + S+ G T+ + + + Sbjct: 176 LPDNTM-RIAFLGRPNVGKSSMVNAIIGQERMV-VSDIAGTTRDSV------DTLVTRDP 227 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G ++ + L + L +LID G+ + D V Sbjct: 228 YTYLLIDTAGIRRKGKTTDKLEKFSVL--KALKALGRCDIALVLIDAEEGITEQDTKVIG 285 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + + +++ K D + ++ + I V+ S++ GI+ L Sbjct: 286 YTQDQGRALIVLINKWDLIKDDKKRQEQLMQEVEIAIKFIPFAPVLKVSALTGTGIKRLF 345 Query: 204 KAI 206 I Sbjct: 346 PEI 348 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 12/129 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N +V R++ A PG T+ + ++ + LVD Sbjct: 9 VALIGRPNVGKSTLFNRMVKRRD-ALVDPTPGVTRD------RHYARVSWEEHPFILVDT 61 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G N L+ ++ L+D R G+ D ++ L + Sbjct: 62 GGIDDEDDTITNHIRHQALL-----AIEEADVIFFLMDGREGLTPSDIEIVDLLRRTEKK 116 Query: 152 YQIVLTKID 160 ++ KID Sbjct: 117 VFFIVNKID 125 >gi|291522204|emb|CBK80497.1| ribosome-associated GTPase EngA [Coprococcus catus GD/7] Length = 441 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 13/186 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P +A G+ NVGKSSLIN L + SN G T+ + +K+N Sbjct: 175 DERPHVAIVGKPNVGKSSLINKLTGENRV-IVSNIAGTTRDAI------DTVIKHNGKEY 227 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D G K++++ + I+R +S V L+ID + GV + D + Sbjct: 228 VFIDTAGLRRKSKIKEDIERYS--IIRTVSAVERANVVVLMIDAKEGVTEQDAKIAGIAH 285 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRK 204 ++ I + K D + +T+ K +R P E++ S+ + + L Sbjct: 286 ERGKGMIIAVNKWDAIEKDD--KTMNKFTKDVREKLAFMPYAEMLFISAETGQRLPKLFD 343 Query: 205 AILETI 210 I I Sbjct: 344 TIDAVI 349 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 64/180 (35%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ ++ + PG T+ + + ++ Sbjct: 4 PIVAIIGRPNVGKSTLFNALAGQQ-ISIVKDTPGVTRDRIYADVNWLN------TQFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P N + + T + L D R GV D V + + + Sbjct: 57 DTGGI----EPSTNDLILKSMREQAEIAIETADVIIFLTDVRQGVVDADFQVANMIRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + Y + +P S + G+ + +++ Sbjct: 113 KPVVLVVNKVDNFKT--------MMADVYEFYNLGLGDPMPISGNSKLGLGDMLDEVIKH 164 >gi|254507481|ref|ZP_05119615.1| GTP-binding protein Era [Vibrio parahaemolyticus 16] gi|219549551|gb|EED26542.1| GTP-binding protein Era [Vibrio parahaemolyticus 16] Length = 325 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 24/192 (12%) Query: 26 KAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 A PE +A GR NVGKS+L+N ++ +K ++ TS P T+H V + Sbjct: 22 PASTPENQHCGFVAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGVDTE---- 76 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQID 138 VD PG + + L+ R + S + V+ L+D H D Sbjct: 77 --GDYQAIYVDTPGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTADD 128 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + V + L K + + K+D + + + + + +V+P S+ K Sbjct: 129 EMVLTKLQKSNFPVVLCVNKVDNV--QDRNDVMLHMMEMSKK--MEFVDVVPISAKHGKN 184 Query: 199 IEVLRKAILETI 210 I+VLRK + E + Sbjct: 185 IDVLRKHVREHL 196 >gi|209694322|ref|YP_002262250.1| GTP-binding protein EngA [Aliivibrio salmonicida LFI1238] gi|238058970|sp|B6EGZ1|DER_ALISL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|208008273|emb|CAQ78418.1| GTP-binding protein [Aliivibrio salmonicida LFI1238] Length = 500 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 15/186 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+LIN ++ + + + PG T+ + ++ Sbjct: 207 QDQPIKLAIIGRPNVGKSTLINRILGEERVV-VYDMPGTTRDSIYI------PMEREGQE 259 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +++ L V L+ID R + D + F Sbjct: 260 YVLIDTAGVRRRGRINETVEKFS--VIKTLKAIEDANVVLLVIDARENISDQDLSLLGFA 317 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 S I + K D L+ E EK K + + S++ G+ L Sbjct: 318 LNAGRSLVIAVNKWDGLN----NEVKEKVKSELDRRLGFVDFARLHFISALHGTGVGHLY 373 Query: 204 KAILET 209 +++ E Sbjct: 374 ESVQEA 379 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N + ++ A ++ PG T+ + K L Sbjct: 2 IPVVALVGRPNVGKSTLFNRVTRTRD-ALVADFPGLTRDRKY------GRAKLEEQEFIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIEEADVVLFMVDGRAGLTSSDEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + +V ++ +G+ L + Sbjct: 110 EKPTFLVVNKIDGIDADAASA---------EFWQLGMSKVYQIAASHGRGVTSLLE 156 >gi|300854433|ref|YP_003779417.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528] gi|300434548|gb|ADK14315.1| putative GTP-binding protein [Clostridium ljungdahlii DSM 13528] Length = 438 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 83/183 (45%), Gaps = 13/183 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++AF G+ NVGKSSLIN L+ + + S+ PG T+ S L+ + + L+D Sbjct: 178 KVAFIGKPNVGKSSLINKLLGEERV-IVSDIPGTTRDAV------DSYLETDYGKLLLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ ++ + +I Y + L++D H + + D+ + + + + Sbjct: 231 TAGLRKKSKVKEEIERY-SVIRTY-TAIERADVCVLILDAVHNISEQDEKIIGYAHELSK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAILE 208 S +++ K D + T +T++K K I + P + S+ + + + + I E Sbjct: 289 SIMVIINKWDLIDKDT--KTVDKYKTEIGTSLSFMPYAPYLFISAKTGQRVNKVLQLIKE 346 Query: 209 TIN 211 + Sbjct: 347 CYD 349 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 20/181 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K ++ + PG T+ + + + Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRISIVEDTPGVTRDRVY------AEAEWLKYNFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + T + ++D + GV D++V L K Sbjct: 55 IIDTGGI----EPESTDVIISQMRRQAQVAVETADTIIFIVDGKEGVTAADREVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID ++ Y+ Y E + S+ + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDNINQNA---------YVYEFYNLGIGEPMAISASQALGLGDMLDKVV 161 Query: 208 E 208 E Sbjct: 162 E 162 >gi|297581162|ref|ZP_06943086.1| GTP-binding protein [Vibrio cholerae RC385] gi|297534478|gb|EFH73315.1| GTP-binding protein [Vibrio cholerae RC385] Length = 494 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + +K + Sbjct: 202 QDLPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMKRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D R + D + F Sbjct: 255 YVLIDTAGVRRRKRINETVEKFS--VVKTLQAIEDANVVLLVVDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D LS + ++ + + S++ G+ L ++ Sbjct: 313 LNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGSEEGVETKMAQQS-----LAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + ++ ++ +G+ L I Sbjct: 110 EKPAILVVNKVDGIDADAASA---------EFWQLGMDQMYQIAAAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|121593586|ref|YP_985482.1| GTP-binding protein EngA [Acidovorax sp. JS42] gi|166224299|sp|A1W581|DER_ACISJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120605666|gb|ABM41406.1| small GTP-binding protein [Acidovorax sp. JS42] Length = 447 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 11/182 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 +A +GR NVGKS+LIN + + L + PG T+ + N Sbjct: 178 NVIRLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDAI------SVPFERNGQKFE 230 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G + ++ + +V+ L + V LL+D GV D + ++ + Sbjct: 231 LIDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILE 288 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + I + K D + Q+ + + + S+ KR+GI L +I+ Sbjct: 289 SGRAVVIAVNKWDAVDDYGRQQLERSIETCLS--FLKFAPLHFISAKKRQGIGPLWSSII 346 Query: 208 ET 209 + Sbjct: 347 QA 348 Score = 91.4 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 63/176 (35%), Gaps = 26/176 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ G T+ + + N + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGNGRQGKHEYIVI 55 Query: 90 DMPGYGY---ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + ++ + + R G+ D D+ ++L Sbjct: 56 DTGGFEPDASSGIYREMARQTQQAVAEADVVVFVVDV-------RGGLSAQDHDIANYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + K E ++ + +L Y EV P S+ +G+ L Sbjct: 109 RLGKPCVLAGNKA---------EGMQDSMHLAEFYELGLGEVHPVSAAHGQGVRSL 155 >gi|39997324|ref|NP_953275.1| GTP-binding protein Era [Geobacter sulfurreducens PCA] gi|39984215|gb|AAR35602.1| GTP-binding protein Era [Geobacter sulfurreducens PCA] gi|298506261|gb|ADI84984.1| GTP-binding protein Era [Geobacter sulfurreducens KN400] Length = 299 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ K + TS+ P T++ + + +D Sbjct: 12 VSIIGRPNVGKSTLLNRILGEK-IVITSDKPQTTRNRIQGI------HNLPGAQIVFIDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG +AR+ ++ LS + V LL++ ++++ L V Sbjct: 65 PGIHHARS-----RLNKFMVEEALSSIREVDLVMLLVEANRAPGDQEREIAGLLPSVNVP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + P E L L EV+P S+ + +E L + + +T+ Sbjct: 120 VFLVVNKIDLIDPDILAERLTAYAELF-----PFREVVPVSAETGENVERLVEVVRDTL 173 >gi|153216257|ref|ZP_01950357.1| GTP-binding protein [Vibrio cholerae 1587] gi|124114402|gb|EAY33222.1| GTP-binding protein [Vibrio cholerae 1587] Length = 494 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + +K + Sbjct: 202 QDLPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMKRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D R + D + F Sbjct: 255 YVLIDTAGVRRRKRINETVEKFS--VVKTLQAIEDANVVLLVVDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D LS + ++ + + S++ G+ L ++ Sbjct: 313 LNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGSEEGVETKMAQQS-----LAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + ++ ++ +G+ L I Sbjct: 110 EKPAILVVNKVDGIDADAASA---------EFWQLGMDQMYQIAAAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|153800614|ref|ZP_01955200.1| GTP-binding protein [Vibrio cholerae MZO-3] gi|153824529|ref|ZP_01977196.1| GTP-binding protein [Vibrio cholerae MZO-2] gi|229513098|ref|ZP_04402564.1| GTP-binding protein EngA [Vibrio cholerae TMA 21] gi|229523415|ref|ZP_04412822.1| GTP-binding protein EngA [Vibrio cholerae TM 11079-80] gi|229525408|ref|ZP_04414813.1| GTP-binding protein EngA [Vibrio cholerae bv. albensis VL426] gi|229530107|ref|ZP_04419497.1| GTP-binding protein EngA [Vibrio cholerae 12129(1)] gi|254225026|ref|ZP_04918640.1| GTP-binding protein [Vibrio cholerae V51] gi|124123903|gb|EAY42646.1| GTP-binding protein [Vibrio cholerae MZO-3] gi|125622413|gb|EAZ50733.1| GTP-binding protein [Vibrio cholerae V51] gi|149741747|gb|EDM55776.1| GTP-binding protein [Vibrio cholerae MZO-2] gi|229333881|gb|EEN99367.1| GTP-binding protein EngA [Vibrio cholerae 12129(1)] gi|229338989|gb|EEO04006.1| GTP-binding protein EngA [Vibrio cholerae bv. albensis VL426] gi|229339778|gb|EEO04793.1| GTP-binding protein EngA [Vibrio cholerae TM 11079-80] gi|229349991|gb|EEO14945.1| GTP-binding protein EngA [Vibrio cholerae TMA 21] gi|327483547|gb|AEA77954.1| GTP-binding protein EngA [Vibrio cholerae LMA3894-4] Length = 494 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + +K + Sbjct: 202 QDLPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMKRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D R + D + F Sbjct: 255 YVLIDTAGVRRRKRINETVEKFS--VVKTLQAIEDANVVLLVVDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D LS + ++ + + S++ G+ L ++ Sbjct: 313 LNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGSEEGVETKMAQQS-----LAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + ++ ++ +G+ L I Sbjct: 110 EKPAILVVNKVDGIDADAASA---------EFWQLGMDQMYQIAAAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|329114596|ref|ZP_08243355.1| GTP-binding protein EngA [Acetobacter pomorum DM001] gi|326696076|gb|EGE47758.1| GTP-binding protein EngA [Acetobacter pomorum DM001] Length = 479 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 69/187 (36%), Gaps = 20/187 (10%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP P + +GR NVGKS+L N LV R+ A ++ PG T+ V Sbjct: 14 LPTGDMPVVVIAGRPNVGKSTLFNRLVGRRQ-ALVADTPGVTRDRKEGVALIRGRY---- 68 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + L+D G A AP +G + S V +D R G+ D+ Sbjct: 69 --VRLIDTAGLEEA-APDSL---FGRMRFSSESAVREADLVLFCVDARAGITPADEHFAQ 122 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ ++ +V K E T + Y E + S+ +G+ L Sbjct: 123 WIRRQNRPVLLVANKT---------EGRLGTASAMEAYALGLGEPLALSAEHGEGVTDLM 173 Query: 204 KAILETI 210 I + + Sbjct: 174 WEIADRL 180 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 10/186 (5%) Query: 25 PKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P+ P +A GR N GKS+L+N L+ + + T G T+ +D + Sbjct: 207 PRPTGPLRVAIVGRPNAGKSTLMNALLGEERM-ITGPEAGLTRDSIAVTLRDGDD----- 260 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +VD G ++++ + + L++D GV + D + Sbjct: 261 -TFEIVDTAGLRKKARIDESLEKMS--VSAAIEALKMAEVAVLVLDATLGVHEQDLQIAR 317 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++++ + + L K D + A + I V+ S++ I L Sbjct: 318 LIEREGRACVLALNKWDAVQDRVATRNAILDRLSISLAQMRGVPVVTFSALTGASIHKLL 377 Query: 204 KAILET 209 A+ + Sbjct: 378 PAVRDA 383 >gi|154498134|ref|ZP_02036512.1| hypothetical protein BACCAP_02115 [Bacteroides capillosus ATCC 29799] gi|150273124|gb|EDN00281.1| hypothetical protein BACCAP_02115 [Bacteroides capillosus ATCC 29799] Length = 441 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 17/189 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++A G+ NVGKSSLIN ++ + + SN G T+ S +N+ Sbjct: 173 QDDVIKVAVIGKPNVGKSSLINRILGEERV-IVSNMAGTTRDAI------DSYYENDKGK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ + L ER +++D + GV + D V Sbjct: 226 YILIDTAGMRKKSKVDDRIEKFSVLRATMAIERCD--VCLIMVDAQEGVTEQDTKVAGLA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + + IV+ K D + +T++K + +R + + ++ S+ + +E L Sbjct: 284 HEAGKACIIVVNKWDAIEKDD--KTMDKMRQDVRRDLSYMTYAPILFISAKTGQRVERL- 340 Query: 204 KAILETINY 212 E INY Sbjct: 341 ---FELINY 346 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 66/180 (36%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS L N LV ++ L+ + PG T+ + + + +V Sbjct: 3 PLVAIVGRPNVGKSMLFNRLVGQR-LSIVEDTPGVTRDRIY------AECEWRNRKFDIV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + + + D + G+ DQ+V + L + Sbjct: 56 DTGGI----EPNTDSEILSFMREQAEIAIRNADVTVFVCDIKSGLTASDQEVANMLLRSG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D++ T + Y + I S+V G L A + Sbjct: 112 KPVVLAVNKMDQVGMTNPD--------IFEFYNLGLGDPIAVSAVHGHGTGDLLDACFQY 163 >gi|262402852|ref|ZP_06079413.1| GTP-binding protein EngA [Vibrio sp. RC586] gi|262351634|gb|EEZ00767.1| GTP-binding protein EngA [Vibrio sp. RC586] Length = 494 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + +K + Sbjct: 202 QDLPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMKRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D R + D + F Sbjct: 255 YVLIDTAGVRRRKRINETVEKFS--VVKTLQAIEDANVVLLVVDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D LS + ++ + + S++ G+ L ++ Sbjct: 313 LNSGRSIVIAVNKWDGLSIDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 66/183 (36%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + L+ V ++D R G+ D+ + L + Sbjct: 55 VDTGGIDGSEEGVETKMAQQS-----LAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + ++ ++ +G+ L I Sbjct: 110 EKPAILVVNKVDGIDADAASA---------EFWQLGMDQMYQIAAAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|262192496|ref|ZP_06050647.1| GTP-binding protein EngA [Vibrio cholerae CT 5369-93] gi|262031655|gb|EEY50242.1| GTP-binding protein EngA [Vibrio cholerae CT 5369-93] Length = 494 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + +K + Sbjct: 202 QDLPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMKRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D R + D + F Sbjct: 255 YVLIDTAGVRRRKRINETVEKFS--VVKTLQAIEDANVVLLVVDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D LS + ++ + + S++ G+ L ++ Sbjct: 313 LNSGRSIVIAVNKWDGLSLDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGSEEGVETKMAQQS-----LAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + ++ ++ +G+ L I Sbjct: 110 EKPAILVVNKVDGIDADAASA---------EFWQLGMDQMYQIAAAHGRGVGTL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|323703320|ref|ZP_08114970.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574] gi|323531683|gb|EGB21572.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574] Length = 302 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A S+ P T+H K S L N + +D Sbjct: 13 VALVGRPNVGKSTLLNKLVGQK-VAIMSDKPQTTRH------KIHSVLSRNDAQIVFLDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG R ++ L + V L++ D+ + L + Sbjct: 66 PGIHKPR-----HKLGEYMVDVALGALKEVDVVLFLVEATGPPGAGDRYIAEQLKEIKTP 120 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ K+D + E + K L+ EV+P S++ + ++ L I++ + Sbjct: 121 VFLLINKVDLVKKEEVLERIVSYKDLL-----DFAEVVPVSALAGENVDRLVDTIVQYL 174 >gi|326316284|ref|YP_004233956.1| ribosome-associated GTPase EngA [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373120|gb|ADX45389.1| ribosome-associated GTPase EngA [Acidovorax avenae subsp. avenae ATCC 19860] Length = 447 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 26/184 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ G T+ + + N K ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGNGKLGKHEYIVI 55 Query: 90 DMPGYGY---ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + ++ + + V ++D R G+ D D+ ++L Sbjct: 56 DTGGFEPDASSGIYREMAKQTQQAV-------AEADVVIFVVDARAGLSAQDHDIANYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V K E + + L Y EV+P S+ +G+ L + Sbjct: 109 RLGKPCLLVGNKA---------EGMREGAQLAEFYELGLGEVLPVSAAHGQGVRSLLETA 159 Query: 207 LETI 210 LET+ Sbjct: 160 LETL 163 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 71/181 (39%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A +GR NVGKS+LIN + + L + PG T+ + N L Sbjct: 179 PIRLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDAI------SVPFERNGQQFEL 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L + V LL+D GV D + ++ + Sbjct: 232 IDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILES 289 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D + Q + + + S+ KR+G+ L +I + Sbjct: 290 GRAVVLAVNKWDAVDDYGRQMLERSIETRLS--FLKFASLHFISAKKRQGLGPLWTSIAQ 347 Query: 209 T 209 Sbjct: 348 A 348 >gi|293189528|ref|ZP_06608248.1| GTP-binding protein Era [Actinomyces odontolyticus F0309] gi|292821618|gb|EFF80557.1| GTP-binding protein Era [Actinomyces odontolyticus F0309] Length = 412 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 76/190 (40%), Gaps = 23/190 (12%) Query: 27 AGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 PE ++ GR NVGKS+L N LV K +A TS P T+H + Sbjct: 109 PDFPEDFRAGFVSIVGRPNVGKSTLTNALVGHK-IAITSGRPETTRHNIRGIV------H 161 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + + LVD PGY R ++ LSE + L D R G DQ Sbjct: 162 GDNYQLVLVDTPGYHRPRTLLGKR--LNDMVREALSE-VDVVLFCLPADQRIGPG--DQF 216 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + L V TK D + + L + L ++P SSV+ KGI+ Sbjct: 217 IARELRGIKRPIIAVATKCDAVPRERVMKHLLSIEKL-----GEWAAIVPVSSVEGKGID 271 Query: 201 VLRKAILETI 210 LR+ + +T+ Sbjct: 272 HLREVLAQTV 281 >gi|154509437|ref|ZP_02045079.1| hypothetical protein ACTODO_01968 [Actinomyces odontolyticus ATCC 17982] gi|153799071|gb|EDN81491.1| hypothetical protein ACTODO_01968 [Actinomyces odontolyticus ATCC 17982] Length = 412 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 76/190 (40%), Gaps = 23/190 (12%) Query: 27 AGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 PE ++ GR NVGKS+L N LV K +A TS P T+H + Sbjct: 109 PDFPEDFRAGFVSIVGRPNVGKSTLTNALVGHK-IAITSGRPETTRHNIRGIV------H 161 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + + LVD PGY R ++ LSE + L D R G DQ Sbjct: 162 GDNYQLVLVDTPGYHRPRTLLGKR--LNDMVREALSE-VDVVLFCLPADQRIGPG--DQF 216 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + L V TK D + + L + L ++P SSV+ KGI+ Sbjct: 217 IARELRGIKRPIIAVATKCDAVPRERVMKHLLSIEKL-----GEWAAIVPVSSVEGKGID 271 Query: 201 VLRKAILETI 210 LR+ + +T+ Sbjct: 272 HLREVLAQTV 281 >gi|269962406|ref|ZP_06176756.1| GTP-binding protein [Vibrio harveyi 1DA3] gi|269832902|gb|EEZ87011.1| GTP-binding protein [Vibrio harveyi 1DA3] Length = 498 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 206 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 258 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 259 YVLIDTAGVRRRGRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 316 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 317 LNAGRSIVLAVNKWDGLDNDVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 374 Query: 206 ILET 209 I E Sbjct: 375 IQEA 378 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 20/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQARLGEEHE-----FIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + + L K Sbjct: 56 IDTGGI---DGTEEGVET--KMAQQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKI 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + ++ ++ +G+ L + Sbjct: 111 EKPAMLVVNKIDGIDADAACA---------DFWQLGVDDMYQIAAAHGRGVTALLE 157 >gi|163802477|ref|ZP_02196370.1| GTP-binding protein EngA [Vibrio sp. AND4] gi|159173778|gb|EDP58593.1| GTP-binding protein EngA [Vibrio sp. AND4] Length = 498 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 206 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 258 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 259 YVLIDTAGVRRRGRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 316 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 317 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 374 Query: 206 ILET 209 I E Sbjct: 375 IQEA 378 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 20/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQASLGEEHE-----FIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + + L K Sbjct: 56 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKI 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + ++ ++ +G+ L + Sbjct: 111 EKPAMLVVNKIDGIDADAACA---------DFWQLGVDDMYHIAAAHGRGVTALLE 157 >gi|58040398|ref|YP_192362.1| GTP-binding protein EngA [Gluconobacter oxydans 621H] gi|58002812|gb|AAW61706.1| GTP-binding protein [Gluconobacter oxydans 621H] Length = 463 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 65/184 (35%), Gaps = 20/184 (10%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P + +GR NVGKS+L N LV R+ A S+ PG T+ + + Sbjct: 8 ENLPVVVIAGRPNVGKSTLFNRLVGRRQ-AIVSDMPGVTRD------RKEGEALLRGRRV 60 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G A +G + S + V ID R G+ D S+L Sbjct: 61 RLIDTAGLEEAAPDT----LYGRMRASSESAVAMADLVLFCIDARSGITPADAHFASWLR 116 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ ++ K E T + Y + S+ +GI L I Sbjct: 117 RQNRPVLLIANKA---------EGQAGTNAALEAYSLGLGTPLALSAEHGEGIADLMGEI 167 Query: 207 LETI 210 E + Sbjct: 168 AERL 171 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 9/183 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 AGP +A GR N GKS+L+N L+ + + T G T+ D Sbjct: 193 PAGPLRLAIIGRPNAGKSTLLNCLLGEERM-ITGPEAGLTRDSITVELHDEHG------P 245 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + LVD G +++++ + + V L+ID GV + D + + Sbjct: 246 IQLVDTAGMRKRARVEQHLEKMS--VSASIEALKMAEVVVLVIDATLGVHEQDLQIGRLI 303 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +++ + I L K D + A + + I V+ S++ G+ L A Sbjct: 304 EREGRACVIALNKWDAVEDRNATKKAILDRLEISLAQVRGIPVVTFSALTGAGVHRLLPA 363 Query: 206 ILE 208 + E Sbjct: 364 VRE 366 >gi|84387629|ref|ZP_00990646.1| GTP-binding protein EngA [Vibrio splendidus 12B01] gi|84377474|gb|EAP94340.1| GTP-binding protein EngA [Vibrio splendidus 12B01] Length = 493 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 202 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMQRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V LLID R + D + F Sbjct: 255 YVLIDTAGVRRRKNINETVEKFS--VVKTLKAIEDANVVLLLIDARDNISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L ++ + + S++ G+ L ++ Sbjct: 313 LNAGRSIVIAVNKWDGLDSDVKDRVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 12/139 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHFSEHDFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQL 109 Query: 149 AVSYQIVLTKIDKLSPTTA 167 +V+ K+D + P A Sbjct: 110 EKPSMLVVNKVDGIDPDAA 128 >gi|156973384|ref|YP_001444291.1| GTP-binding protein EngA [Vibrio harveyi ATCC BAA-1116] gi|166225933|sp|A7MZE5|DER_VIBHB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|156524978|gb|ABU70064.1| hypothetical protein VIBHAR_01071 [Vibrio harveyi ATCC BAA-1116] Length = 498 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 206 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 258 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 259 YVLIDTAGVRRRGRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 316 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 317 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 374 Query: 206 ILET 209 I E Sbjct: 375 IQEA 378 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 20/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQARLGEEHE-----FIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + + L K Sbjct: 56 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKI 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + ++ ++ +G+ L + Sbjct: 111 EKPAMLVVNKIDGIDADAACA---------DFWQLGVDDMYQIAAAHGRGVTALLE 157 >gi|153833535|ref|ZP_01986202.1| GTP-binding protein EngA [Vibrio harveyi HY01] gi|148870186|gb|EDL69127.1| GTP-binding protein EngA [Vibrio harveyi HY01] Length = 498 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 206 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 258 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 259 YVLIDTAGVRRRGRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 316 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 317 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 374 Query: 206 ILET 209 I E Sbjct: 375 IQEA 378 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 20/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQARLGEEHE-----FIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + + L K Sbjct: 56 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFLVDGRAGLTPSDEAIAAHLRKI 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + ++ ++ +G+ L + Sbjct: 111 EKPAMLVVNKIDGIDADAACA---------DFWQLGVDDMYQIAAAHGRGVTALLE 157 >gi|261212137|ref|ZP_05926423.1| GTP-binding protein EngA [Vibrio sp. RC341] gi|260838745|gb|EEX65396.1| GTP-binding protein EngA [Vibrio sp. RC341] Length = 494 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + +K + Sbjct: 202 QDLPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMKRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D R + D + F Sbjct: 255 YVLIDTAGVRRRKRINETVEKFS--VVKTLQAIEDANVVLLVVDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D LS + ++ + + S++ G+ L ++ Sbjct: 313 LNSGRSIVIAVNKWDGLSIDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 98.7 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGIDGSEEGVETKMAQQS-----LAAIDEADVVLFMVDGRAGLTVADEAIAQHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + ++ ++ +G+ L I Sbjct: 110 EKPAILVVNKVDGIDADAASA---------EFWQLGMDQMYQIATAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|313897444|ref|ZP_07830987.1| ribosome biogenesis GTPase Der [Clostridium sp. HGF2] gi|312957814|gb|EFR39439.1| ribosome biogenesis GTPase Der [Clostridium sp. HGF2] Length = 436 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 15/198 (7%) Query: 21 IGLLPK------AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 I LP+ G + GR NVGKSSL+N ++N++ + SN G T+ Sbjct: 160 IHALPEKEKNEYDGMTKFCVIGRPNVGKSSLVNAILNQERV-IVSNIEGTTRDAI----- 213 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + K ++D G +N++ + L ERS V ++ID G+ Sbjct: 214 -DTPFKREGKEYVVIDTAGIRKRGKVYENIEKYSVLRAMSAIERSD--VVLVVIDGEKGI 270 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D+ V + + IV K D + + + + ++ V+ S++ Sbjct: 271 RDQDKHVAGYAHEAGKGVVIVYNKWDAVEKDEQTMHTIEKEIRAQFLYLSYAPVLFVSAL 330 Query: 195 KRKGIEVLRKAILETINY 212 K++ I + I E +Y Sbjct: 331 KKQRIHTILPVIDEVHDY 348 Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 61/179 (34%), Gaps = 21/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS++ N ++ + + + PG T+ + + ++D Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERK-SIVEDTPGVTRDRIY------GKAEWLTREFRVIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + I C+ ++ + G+ D+ V L K Sbjct: 59 GGIQLANQDFQTEINMQVEI-----AIDEADCIVFVVSGKDGLTHDDEYVARLLHKTKKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + + Y + + S GI + A++ + Sbjct: 114 VILAVNKVD---------DFAQNDAIYEFYSLGLGDPLAVSGAHGIGIGDVLDAVIHAL 163 >gi|251796247|ref|YP_003010978.1| GTP-binding protein Era [Paenibacillus sp. JDR-2] gi|247543873|gb|ACT00892.1| GTP-binding protein Era [Paenibacillus sp. JDR-2] Length = 299 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A S+ P T++ V + + +D Sbjct: 11 VAIIGRPNVGKSTLMNHLIGQK-IAIMSDKPQTTRNKIHGVYT------TDTSQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P+ + + ++ + V LID G+ D+ + L K Sbjct: 64 PGI---HKPQSKLGDY--MMKTAEGALKEVEAVLFLIDVADGLGGGDRFIIEQLKKVDTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KIDK+ P T+ + K L YP A E++P S+++ +E L + + + Sbjct: 119 VFLVMNKIDKVQPEQLLSTITQYKDL---YPFA--EIVPISALQGNNVETLLAQLQKYL 172 >gi|315604800|ref|ZP_07879859.1| GTP-binding protein Era [Actinomyces sp. oral taxon 180 str. F0310] gi|315313471|gb|EFU61529.1| GTP-binding protein Era [Actinomyces sp. oral taxon 180 str. F0310] Length = 402 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 76/190 (40%), Gaps = 23/190 (12%) Query: 27 AGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 PE ++ GR NVGKS+L N LV K +A TS P T+H + Sbjct: 99 PDFPEDFRAGFVSIVGRPNVGKSTLTNALVGAK-IAITSGRPETTRHNIRGIV------H 151 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + + LVD PGY R ++ LSE + L D R G DQ Sbjct: 152 GDNYQLVLVDTPGYHRPRTLLGKR--LNDMVREALSE-VDVVLFCLPADQRIGPG--DQF 206 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + L V TK D ++ + L + L ++P SSV+ KGI+ Sbjct: 207 IARELRSVKRPIIAVATKCDAVARERVMKHLLAIEKL-----GEWAAIVPVSSVEGKGID 261 Query: 201 VLRKAILETI 210 LR + +T+ Sbjct: 262 HLRDVLAQTV 271 >gi|260892064|ref|YP_003238161.1| GTP-binding protein Era [Ammonifex degensii KC4] gi|260864205|gb|ACX51311.1| GTP-binding protein Era [Ammonifex degensii KC4] Length = 300 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+LIN LV +K +A S+ P T+H V L + VD Sbjct: 11 VSVVGRPNVGKSTLINHLVGQK-VAIVSDKPQTTRHRILGV------LTLPEAQIVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG R L+ L + V L + D + L K V Sbjct: 64 PGIHKPR-----HRLGEYLVTLALGALKGVDLVLFLSEATSPPGAGDYFILEQLKKAEVP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID +S ++ + ++P S++ + +E L + I+E + Sbjct: 119 VILVLNKIDLISKPRLLPLIDLWRQE-----HDFAAIVPVSALTGENLERLVQEIVEHL 172 >gi|15601970|ref|NP_245042.1| GTP-binding protein EngA [Pasteurella multocida subsp. multocida str. Pm70] gi|13431507|sp|P57812|DER_PASMU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|12720316|gb|AAK02189.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 510 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 69/184 (37%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 218 QDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSIYI------PMERDGQH 270 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L ID R GV D + F+ Sbjct: 271 YTIIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDAREGVSDQDLSLLGFI 328 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D L+ + + + V S++ G+ L + Sbjct: 329 LNAGRSLVIVVNKWDGLNQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 386 Query: 206 ILET 209 I E Sbjct: 387 IQEA 390 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 26/187 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQANIAGY------DFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLTSADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI----EVLRK 204 +V K D + + + Y EV ++ + +G+ E + Sbjct: 112 NKITVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAASQGRGVSALMEQVLA 162 Query: 205 AILETIN 211 I E +N Sbjct: 163 PIAEKMN 169 >gi|253732325|ref|ZP_04866490.1| possible GTPase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253723925|gb|EES92654.1| possible GTPase [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 106 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 9/105 (8%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + + P+ E+A SGRSNVGKS+ IN ++ RKN+ARTS PG+TQ LNF+ Sbjct: 11 IISAVKEEQYPETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNID 70 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 + + VD+PGYGYA+ K + +G +I Y+++R Sbjct: 71 E---------QLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRE 106 >gi|323143788|ref|ZP_08078456.1| ribosome biogenesis GTPase Der [Succinatimonas hippei YIT 12066] gi|322416501|gb|EFY07167.1| ribosome biogenesis GTPase Der [Succinatimonas hippei YIT 12066] Length = 568 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 70/189 (37%), Gaps = 12/189 (6%) Query: 22 GLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 P A P + A G+ NVGKS+L N L+ + + PG T+ + L+ Sbjct: 232 EHTPFADLPIKFALVGKPNVGKSTLTNRLLGEDRVV-VCDMPGTTRDSIYI------PLE 284 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 ++D G R + ++ + IV+ L L+ID R + D Sbjct: 285 REHKKYIVIDTAGVRKRRKVSEAIEKFS--IVKTLKAIEDCNVAVLVIDARENITDQDLS 342 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + F+ S I + K D LS + + +R V S++ G+ Sbjct: 343 LLGFILDSGRSLVIAVNKWDGLSKEYKDDIRRELN--LRLGFVDFARVHFISALHGTGVG 400 Query: 201 VLRKAILET 209 + +I E Sbjct: 401 NIFDSIDEA 409 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L N L ++ A ++ PG T+ + + ++D Sbjct: 4 VALVGCPNVGKSTLFNRLTKTRD-ALVADFPGLTRDRKY------GRALFDGREYIVIDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A+ ++ D + + L V ++D R G+ D V ++ K Sbjct: 57 GGI--AKDAEQPSDLTSKMTEQALLAIEECDLVLFMVDARAGIMPGDYQVAEYIRKSGKK 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V KID L P A Y EV ++ +G+++L I + I Sbjct: 115 CAVVANKIDGLDPDIA---------GTEFYGLGLGEVHQIAAAHGRGVQIL---IEDVI 161 >gi|220917392|ref|YP_002492696.1| small GTP-binding protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219955246|gb|ACL65630.1| small GTP-binding protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 465 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 28/184 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L R+ +A + PG T+ N+ +++ A+++ Sbjct: 5 RPVVALVGRPNVGKSTLFNRLAGRR-VAIVEDVPGVTRDRNY------ADVIWEGRAVSV 57 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFS 143 VD G+ +S L+ + + E++ L V L++D R G+ +D++V Sbjct: 58 VDTGGFEP--------ESRDRLMSQ-VREQAQLAVDEASAVVLVVDGRDGLTALDRNVAD 108 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + + + K+D E+ L Y EV S+ +G+ L Sbjct: 109 LLRRAGKPLFVAVNKVD-------TARTEEDVPLAEFYGLGFGEVHAVSAEHGRGVSGLV 161 Query: 204 KAIL 207 AI+ Sbjct: 162 DAIV 165 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 9/180 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 G +A GR NVGKS+ +N L+ + S+ PG T+ S + + Sbjct: 192 PVGDIRLAIVGRPNVGKSTFVNALLGEERFV-VSDVPGTTRDAI------DSLVAHKGRR 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + D G R+ + V+S+ +VR + V L+D + D + + Sbjct: 245 FVVTDTAGIRRKRSIAQKVESFS--VVRAMKAMDQAEVVACLLDATEAGVEQDARLLGLV 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K + IV+ K D A + + + R ++ S+ +R+G+ + + Sbjct: 303 AEKGKALVIVVNKWDIAEREGATQDWYRKELTKRLPFVGFAPMLFVSAKERRGVHRVLEK 362 >gi|197122609|ref|YP_002134560.1| GTP-binding protein EngA [Anaeromyxobacter sp. K] gi|196172458|gb|ACG73431.1| small GTP-binding protein [Anaeromyxobacter sp. K] Length = 465 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 28/184 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L R+ +A + PG T+ N+ +++ A+++ Sbjct: 5 RPVVALVGRPNVGKSTLFNRLAGRR-VAIVEDVPGVTRDRNY------ADVIWEGRAVSV 57 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFS 143 VD G+ +S L+ + + E++ L V L++D R G+ +D++V Sbjct: 58 VDTGGFEP--------ESRDRLMSQ-VREQAQLAVDEASAVVLVVDGRDGLTALDRNVAD 108 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + + + K+D E+ L Y EV S+ +G+ L Sbjct: 109 LLRRAGKPLFVAVNKVD-------TARTEEDVPLAEFYGLGFGEVHAVSAEHGRGVSGLV 161 Query: 204 KAIL 207 AI+ Sbjct: 162 DAIV 165 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 9/180 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 G +A GR NVGKS+ +N L+ + S+ PG T+ S + + Sbjct: 192 PVGDIRLAIVGRPNVGKSTFVNALLGEERFV-VSDVPGTTRDAI------DSLVAHKGRR 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + D G R+ V+S+ +VR + V L+D + D + + Sbjct: 245 FVVTDTAGIRRKRSIALKVESFS--VVRAMKAMDQAEVVACLLDATEAGVEQDARLLGLV 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K + IV+ K D A + + + R ++ S+ +R+G+ + + Sbjct: 303 AEKGKALVIVVNKWDIAEREGATQDWYRKELTKRLPFVGFAPMLFVSAKERRGVHRVLEK 362 >gi|18976486|ref|NP_577843.1| GTP-binding protein [Pyrococcus furiosus DSM 3638] gi|18892029|gb|AAL80238.1| GTP-binding protein [Pyrococcus furiosus DSM 3638] Length = 190 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 26/192 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L +K R PG T+ + ++ N K ++DM Sbjct: 4 IVFVGRSNVGKSTLIYQLTGKK--VRRGKRPGVTRKIIEI---EWRNHK-------IIDM 51 Query: 92 PGYGY-ARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDC-----------RHGVKQID 138 PG+G+ A PK+ + IV ++ + L++D + G ID Sbjct: 52 PGFGFMAGLPKEVQERIKDEIVHFIENNAKNIDVAVLVVDGKAAPEIIERWEKRGEIPID 111 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + FL + + + KIDK+ K+ + + +P S+ Sbjct: 112 VEFYQFLTDLEIPTIVAVNKIDKIKNVQGVIYFLAEKFGV-PFSEIEKVFVPISAKFGTN 170 Query: 199 IEVLRKAILETI 210 IEVL+ I E I Sbjct: 171 IEVLKGRINEII 182 >gi|254230525|ref|ZP_04923896.1| GTP-binding protein Era [Vibrio sp. Ex25] gi|262393271|ref|YP_003285125.1| GTP-binding protein Era [Vibrio sp. Ex25] gi|151936950|gb|EDN55837.1| GTP-binding protein Era [Vibrio sp. Ex25] gi|262336865|gb|ACY50660.1| GTP-binding protein Era [Vibrio sp. Ex25] Length = 320 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 24/192 (12%) Query: 26 KAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + PE IA GR NVGKS+L+N ++ +K ++ TS P T+H V D Sbjct: 17 EPSSPENQHCGFIAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD---- 71 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQID 138 VD PG + + L+ R + S + V+ L+D H + D Sbjct: 72 --GDYQAIYVDTPGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTKDD 123 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + V + L K + + K+D + E + + + +V+P S+ + K Sbjct: 124 EMVLTKLQKSNFPVVLCVNKVDNV--QDRNEVMLHMAEMSKKMD--FVDVVPISAKQGKN 179 Query: 199 IEVLRKAILETI 210 I+VLRK + + Sbjct: 180 IDVLRKHVRNHL 191 >gi|157874287|ref|XP_001685628.1| hypothetical protein [Leishmania major strain Friedlin] gi|68128700|emb|CAJ08833.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 787 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 23/173 (13%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S+ +F + L+ V + LP+ PE+ F G+ GKSSLI+ L++ L + Sbjct: 69 LSNEVFGRGN-RHLKNVETLTALPEGLHSFPEVCFIGKPGCGKSSLISCLLHNHRLGKAG 127 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPK-----KNVDSWGGLIVRY 114 G T+ L FF D A+ LVD PGYG R + + ++ RY Sbjct: 128 ATAGTTRLLQFFNVGD---------ALLLVDTPGYGGWRGREVGQRLAEQANAFSILFRY 178 Query: 115 LSER--STLRCVYLLIDCRHG----VKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 L+ R S L+ VY L++ + D+++ +FL ++ + + +VLTKID+ Sbjct: 179 LALRNGSNLKRVYWLMESSAPTPVSFQPRDEELLTFLSRERIPFSVVLTKIDR 231 >gi|148265177|ref|YP_001231883.1| GTP-binding protein EngA [Geobacter uraniireducens Rf4] gi|189037149|sp|A5G692|DER_GEOUR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|146398677|gb|ABQ27310.1| small GTP-binding protein [Geobacter uraniireducens Rf4] Length = 441 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N +V R+ A + PG T+ N+ F L Sbjct: 2 RPLIAIVGRPNVGKSTLFNRIVGRRK-AMVDDMPGVTRDRNYANVDRFD------VPFIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G+ P+ N + + + + ++D R G+ D +V L + Sbjct: 55 IDTGGF----EPETNDRLLQQMREQSQLAMAEADVILFVMDGRDGLTPADVEVVEMLRRV 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ KID QET + Y + S+ +G+ L +++ Sbjct: 111 DKPIFYLINKID----GDKQET-----AIGDFYTLGVDTIFTVSAEHNRGVNDLMDEVIK 161 Query: 209 TI 210 + Sbjct: 162 AL 163 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 26/209 (12%) Query: 3 SHTIFTKSAWIFLRGVPE-----IGLLPKAGPP-------EIAFSGRSNVGKSSLINILV 50 TIFT SA RGV + I LPK +IA GR NVGKS+L+N L+ Sbjct: 138 VDTIFTVSA-EHNRGVNDLMDEVIKALPKGSAADTDEEVTKIAVIGRPNVGKSTLVNRLL 196 Query: 51 NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL 110 + + + PG T+ + N L+D G + ++ + Sbjct: 197 GIERVV-ANPTPGTTRDSI------DTYFTCNRKRYLLIDTAGIRRKGKTTEKIEKYS-- 247 Query: 111 IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ-- 168 +V L V ++ID GV + D + + + V+ K D L+ A Sbjct: 248 VVDSLRSIERADVVLIVIDAEEGVTEQDTKIAGYAYEAGRGCIFVVNKWDTLTKDNASMG 307 Query: 169 ETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + +EK + + P A ++ S+ + Sbjct: 308 KFIEKIRMEFKYLPFA--PIVFVSAKTGQ 334 >gi|148380476|ref|YP_001255017.1| GTP-binding protein [Clostridium botulinum A str. ATCC 3502] gi|153932865|ref|YP_001384700.1| GTP-binding protein EngA [Clostridium botulinum A str. ATCC 19397] gi|153936714|ref|YP_001388221.1| GTP-binding protein EngA [Clostridium botulinum A str. Hall] gi|166224327|sp|A7FW89|DER_CLOB1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224328|sp|A5I4V0|DER_CLOBH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|148289960|emb|CAL84073.1| putative GTP-binding protein EngA [Clostridium botulinum A str. ATCC 3502] gi|152928909|gb|ABS34409.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397] gi|152932628|gb|ABS38127.1| ribosome-associated GTPase EngA [Clostridium botulinum A str. Hall] Length = 439 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 15/175 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLP 84 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V DF Sbjct: 173 DDERINIAFIGKPNVGKSSLINKLLGEERL-IVSDIPGTTRDSIDSYVDTDFGE------ 225 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G K+ ++ + +I Y + L+ID G+ + DQ + + Sbjct: 226 -FTLIDTAGLRRKSKVKEEIERY-SVIRTY-ASIERADVCILMIDATEGISEQDQKIIGY 282 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRK 197 + +++ K D + +T++K K ++ + P + + S+ + Sbjct: 283 AHDINKAILVIVNKWDLVEKDD--KTMDKFKKELKVNLSFMPYAKYLFISAKTGQ 335 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 20/180 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K ++ + PG T+ + ++ N K ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAG-KRISIVQDTPGVTRDRI-YAEAEWLNYK-----FTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G PK + + + L+D + G+ D++V L K Sbjct: 57 DTGGI----EPKSEDIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADKEVAQMLRKSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KIDKL Y + + SS + G+ + ++E Sbjct: 113 KPVVLVVNKIDKLKDEN---------NAYEFYNLGIGDPVTISSSQALGLGDMLDRVVEY 163 >gi|260771392|ref|ZP_05880317.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972] gi|260613518|gb|EEX38712.1| GTP-binding protein EngA [Vibrio furnissii CIP 102972] gi|315180972|gb|ADT87886.1| GTP-binding protein [Vibrio furnissii NCTC 11218] Length = 495 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 203 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMQRDERE 255 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D R + D + F Sbjct: 256 YVLIDTAGVRRRKRINETVEKFS--VVKTLKAIEDANVVLLVVDARENISDQDLSLLGFA 313 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + ++ + + S++ G+ L ++ Sbjct: 314 LNAGRSIVIAVNKWDGLDTDVKERVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 371 Query: 206 ILET 209 + E Sbjct: 372 VQEA 375 Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 73/183 (39%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + + L + Sbjct: 55 IDTGGI---DGSEEGVET--KMAAQSLAAIDEADVVLFMVDGRAGLTVADEAIANHLRRV 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K+D + TA + ++ ++ +G+ L I Sbjct: 110 EKNAILVVNKVDGIDAETASA---------EFWQLGVDQMFQIAAAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|323491197|ref|ZP_08096383.1| GTPase Era [Vibrio brasiliensis LMG 20546] gi|323314565|gb|EGA67643.1| GTPase Era [Vibrio brasiliensis LMG 20546] Length = 325 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H V + VD Sbjct: 34 VAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGVDTE------GDYQAIYVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V+ L+D H D+ V + L K Sbjct: 87 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTSDDEMVLTKLQKSNF 140 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + + + + + +V+P S+ K I+VLRK + E + Sbjct: 141 PVVLCVNKVDNV--QDRNDVMLHMMEMSKK--MEFVDVVPISAKHGKNIDVLRKHVREHL 196 >gi|74316616|ref|YP_314356.1| GTP-binding protein EngA [Thiobacillus denitrificans ATCC 25259] gi|123773049|sp|Q3SL66|DER_THIDA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|74056111|gb|AAZ96551.1| GTP-binding protein [Thiobacillus denitrificans ATCC 25259] Length = 469 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 11/182 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 G P+IA GR NVGKS+L+N LV + + + PG T+ + + + Sbjct: 172 DFGVPKIALVGRPNVGKSTLVNALVGAERV-IAFDQPGTTRDSIY------VDFERGGKP 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +++ L V L++D R + + D + F+ Sbjct: 225 YVLIDTAGVRRRGKVFETVEKFS--VIKTLQAIEDANVVVLVLDARENISEQDAHLAGFV 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + + K D LS + + A I S++K KG+E L K Sbjct: 283 LETGRALVVAINKWDGLSAEQRDDVKRDIGRKLAFLDFARFNYI--SALKAKGLENLLKD 340 Query: 206 IL 207 I Sbjct: 341 IE 342 Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 56/177 (31%), Gaps = 20/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + GR NVGKS+L N L ++ A + PG T+ + + + + Sbjct: 2 LPTLVLVGRPNVGKSTLFNRLTGTRD-ALVHDLPGMTRD------RHYGRGRIGGKPYLV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L + ++D R GV D+ + L + Sbjct: 55 VDTGGLEPVVKDG----ILAEMARQTLQAIDEADAIIFMVDARAGVTPQDKVIADRLRRV 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K E + + + E + S GI L Sbjct: 111 TSPVLLAVNKA---------EGMNRAVVTAEFHELGLGEPLAISGAHGDGIADLVAE 158 >gi|170718421|ref|YP_001783641.1| GTP-binding protein EngA [Haemophilus somnus 2336] gi|168826550|gb|ACA31921.1| small GTP-binding protein [Haemophilus somnus 2336] Length = 511 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 218 EDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSIYI------PMERDGQQ 270 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G V+ + +++ L + L ID R G+ D + F+ Sbjct: 271 YTLIDTAGVRKRGKVHLTVEKFS--VIKTLQAIQDANVILLTIDARQGISDQDLSLLGFI 328 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D L+ + + + V S++ G+ L + Sbjct: 329 LNTGRSLVIVVNKWDGLNQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 386 Query: 206 ILET 209 I E Sbjct: 387 IKEA 390 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + N ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAHFNGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + +L K+ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADIVLFLVDARAGLTSADVGIAQYLRKRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y E+ ++ + +GI L + +L Sbjct: 112 NKTTVLVANKTDGIDADS---------HCAEFYQLGLGEIEKIAASQGRGISALMEKVL 161 >gi|257465498|ref|ZP_05629869.1| GTP-binding protein EngA [Actinobacillus minor 202] gi|257451158|gb|EEV25201.1| GTP-binding protein EngA [Actinobacillus minor 202] Length = 510 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 218 EDKNIKIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQH 270 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L ID R G+ D + F+ Sbjct: 271 YTIIDTAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFI 328 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D LS + + + V S++ G+ L ++ Sbjct: 329 LNAGRSLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFES 386 Query: 206 ILET 209 + E Sbjct: 387 VKEA 390 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 70/186 (37%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHAN------IGGYDFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGSEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLVPADVGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G IE + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLAP 161 Query: 206 ILETIN 211 + E + Sbjct: 162 LAEELG 167 >gi|163749553|ref|ZP_02156800.1| GTP-binding protein EngA [Shewanella benthica KT99] gi|161330663|gb|EDQ01600.1| GTP-binding protein EngA [Shewanella benthica KT99] Length = 492 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 72/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+LIN ++ + + ++PG T+ + + Sbjct: 196 QDLPIKLAIIGKPNVGKSTLINRILGEERVV-VYDSPGTTRDSIYI------PMVREGRE 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +++ L V L+ID R G+ + D + F Sbjct: 249 YVLIDTAGVRRRSKVNETVEKFS--VIKTLKAVEDCNVVLLIIDAREGITEQDLGLLGFA 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 307 LNAGRALVIAVNKWDGIDQEIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLYES 364 Query: 206 ILETIN 211 + E + Sbjct: 365 VEEAYD 370 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRASLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L+ V L D R G+ D + L ++ Sbjct: 55 VDTGGIDGTEEGIEVHMAQQS-----LAAIEEADVVLFLTDARAGLTAADHAIAEHLRRR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V KID + Sbjct: 110 DKTTFVVANKIDGID 124 >gi|91792618|ref|YP_562269.1| GTP-binding protein EngA [Shewanella denitrificans OS217] gi|122968866|sp|Q12PT0|DER_SHEDO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|91714620|gb|ABE54546.1| Small GTP-binding protein domain [Shewanella denitrificans OS217] Length = 491 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 75/186 (40%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+LIN ++ + + +APG T+ + ++ Sbjct: 196 QDLPIKLAIIGKPNVGKSTLINRILGEERVV-VYDAPGTTRDSIYI------PMEREGRE 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +++ L V L++D R G+ + D + F Sbjct: 249 YVLIDTAGVRRRSKVHEVIEKFS--VIKTLKAVEDANVVLLVVDAREGIAEQDLGLLGFT 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + T + + ++ S++ G+ L ++ Sbjct: 307 LNAGRALVIAVNKWDGIDQTVKDRVKSELDRRLG--FIDFAKIHFISALHGTGVGHLYES 364 Query: 206 ILETIN 211 I E + Sbjct: 365 IEEAYD 370 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAFLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V L D R G+ D + L + Sbjct: 55 VDTGGI---DGSEEGIET--KMAEQSLAAIEEADVVLFLTDARAGLTSADLAIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 DKTTFVVANKVDGID 124 >gi|113461468|ref|YP_719537.1| GTP-binding protein EngA [Haemophilus somnus 129PT] gi|112823511|gb|ABI25600.1| GTP-binding protein [Haemophilus somnus 129PT] Length = 511 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 218 EDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSIYI------PMERDGQQ 270 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G V+ + +++ L + L ID R G+ D + F+ Sbjct: 271 YTLIDTAGVRKRGKVHLTVEKFS--VIKTLQAIQDANVILLTIDARQGISDQDLSLLGFI 328 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D L+ + + + V S++ G+ L + Sbjct: 329 LNTGRSLVIVVNKWDGLNQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 386 Query: 206 ILET 209 I E Sbjct: 387 IKEA 390 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + N ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAHFNGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + +L K+ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADIVLFLVDARAGLTSADVGIAQYLRKRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y E+ ++ + +GI L + +L Sbjct: 112 NKTTVLVANKTDGIDADS---------HCAEFYQLGLGEIEKIAASQGRGISALMEKVL 161 >gi|293391945|ref|ZP_06636279.1| GTP-binding protein EngA [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952479|gb|EFE02598.1| GTP-binding protein EngA [Aggregatibacter actinomycetemcomitans D7S-1] Length = 510 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 67/188 (35%), Gaps = 11/188 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P +IA GR NVGKS+L N ++ + + PG T+ + ++ Sbjct: 214 EQTPDKKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSIYI------PMER 266 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G V+ + +++ L V L+ID R + D + Sbjct: 267 DNQNYTLIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLVIDARENISDQDLSL 324 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ S IV+ K D L + + V S++ G+ Sbjct: 325 LGFILNAGRSLVIVVNKWDGLDTEVKNRVKSELDRRLD--FIDFARVHFISALHGSGVGN 382 Query: 202 LRKAILET 209 L +I E Sbjct: 383 LFDSIKEA 390 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 13/135 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHLAGHDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADIVLFLVDARAGLTSADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 112 NKTTVVVANKVDGID 126 >gi|260460374|ref|ZP_05808626.1| small GTP-binding protein [Mesorhizobium opportunistum WSM2075] gi|259034019|gb|EEW35278.1| small GTP-binding protein [Mesorhizobium opportunistum WSM2075] Length = 476 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 68/184 (36%), Gaps = 26/184 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 4 KVAIIGRPNVGKSTLFNRLVGRK-LALVDDTPGVTRDRRVHAAKLYDLH------FDVID 56 Query: 91 MPGYGYARA---PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 G+ A A P + I ++ ID + G+ D+ + K Sbjct: 57 TAGFEDAAASTLPGRMRAQTEIAIHE-------ADLIFFTIDAKSGLLPDDRTFAEIVRK 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K E ++ + E IP S+ +G+ LR A++ Sbjct: 110 SGKPVVLVANKA---------EAKGAQGGMLEAWELGLGEPIPVSAEHGQGMPDLRDAVI 160 Query: 208 ETIN 211 + Sbjct: 161 AALG 164 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 13/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA GR N GKS+LIN L+ + L T G T+ + Sbjct: 201 DTKPMRIAVVGRPNAGKSTLINALIGEERL-LTGPEAGITRDSI------SVDWDWRGRR 253 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L D G + ++ + L V +++D ++ D + + Sbjct: 254 IKLFDTAGMRRKARIHEKLEVMS--VQDGLRAIRFAEIVIIVLDATIPFEKQDLQIADLI 311 Query: 146 DKKAVSYQIVLTKIDKLS--PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + I K D + E EKT+ L+ + +P S+ +G++ L Sbjct: 312 IREGRAPVIAFNKWDLIDHPQELLAELREKTERLLPQ--ARGIQAVPVSAETGRGLDKLM 369 Query: 204 KAILET 209 A+L+T Sbjct: 370 DAVLKT 375 >gi|240949663|ref|ZP_04753998.1| GTP-binding protein EngA [Actinobacillus minor NM305] gi|240295921|gb|EER46597.1| GTP-binding protein EngA [Actinobacillus minor NM305] Length = 510 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 218 EDKNIKIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQH 270 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L ID R G+ D + F+ Sbjct: 271 YTIIDTAGVRRRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFI 328 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D LS + + + V S++ G+ L ++ Sbjct: 329 LNAGRSLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFES 386 Query: 206 ILET 209 + E Sbjct: 387 VKEA 390 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 70/186 (37%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHAN------IGGYDFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGSEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLLPADVGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G IE + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLAP 161 Query: 206 ILETIN 211 + E + Sbjct: 162 LAEELG 167 >gi|154505327|ref|ZP_02042065.1| hypothetical protein RUMGNA_02842 [Ruminococcus gnavus ATCC 29149] gi|153794370|gb|EDN76790.1| hypothetical protein RUMGNA_02842 [Ruminococcus gnavus ATCC 29149] Length = 450 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 13/188 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P+IA G+ NVGKSS++N L+ + S+ G T+ + +K+ Sbjct: 182 EDERPKIAIVGKPNVGKSSIVNKLLGENRV-IVSDIAGTTRDAI------DTAIKHEDRE 234 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ V ++ID GV + D + Sbjct: 235 YIFIDTAGLRRKNKIKEELERFS--IIRTVTAVERADVVLMVIDATEGVTEQDAKIAGIA 292 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 ++ IV+ K D + +T+++ + IR P E++ S+ + + L Sbjct: 293 HERGKGVIIVVNKWDAIEKND--KTMKQYENDIRTTLAYMPYAEIMYVSAKTGQRLNKLY 350 Query: 204 KAILETIN 211 I I+ Sbjct: 351 DMIDMVID 358 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + ++ + PG T+ + +++ ++ Sbjct: 12 PVVAIVGRPNVGKSTLFNTLAGER-ISIVKDTPGVTRDRIY------ADVSWLDKEFTMI 64 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + T + + D R G+ D V L + Sbjct: 65 DTGGI----EPDSSDIILSQMREQAQIAIDTADVIVFITDVRQGLVDADSKVADMLRRSK 120 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D + Y + +P S+ R GI + ++ Sbjct: 121 KPVVLVVNKVDNFDK--------FMPDVYEFYNLGIGDPVPISAASRLGIGDMLDEVV 170 >gi|149192068|ref|ZP_01870293.1| GTP-binding protein Era [Vibrio shilonii AK1] gi|148834093|gb|EDL51105.1| GTP-binding protein Era [Vibrio shilonii AK1] Length = 329 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H V D VD Sbjct: 35 VAIVGRPNVGKSTLLNHILGQK-ISITSRKPQTTRHRIMGVDTD------GDYQAIYVDT 87 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V L+D H D+ V + L K Sbjct: 88 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVLFLVDGTH-WTDDDEMVLNKLRKSDF 141 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + + + L + +V+P S+ K +VLRK + E + Sbjct: 142 PVILCMNKVDNVK--DRNDVMLHMHELSKKMD--FVDVVPISAKHGKNTDVLRKHVREHL 197 >gi|88858476|ref|ZP_01133118.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2] gi|88820093|gb|EAR29906.1| GTP-binding protein EngA [Pseudoalteromonas tunicata D2] Length = 492 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 11/183 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P ++A GR NVGKS+L N ++ + + + PG T+ + + N Sbjct: 202 DKPIKLAIIGRPNVGKSTLTNRILGEERV-IVYDMPGTTRDSIYI------PMTRNDQEY 254 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + + + +++ L V L++D R G+ D + F Sbjct: 255 VLIDTAGVRKRKKVSDVAEKFS--VIKTLKAIEDANVVLLVVDAREGISDQDLSLLGFAL 312 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S I + K D L +T KT+ R + S++ G+ L +++ Sbjct: 313 NSGRSLVIAVNKWDGLD--EYVKTRIKTELDRRLGFIDFARIHFISALHGTGVGHLFESV 370 Query: 207 LET 209 E Sbjct: 371 DEA 373 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 23/182 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + K + + Sbjct: 2 LPVIALVGRPNVGKSTLFNRLTRSRD-ALVADFPGLTRDRKY------GQAKYDEYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ ++ + + L V L+D R G+ DQ + + L K Sbjct: 55 VDTGGI---DGSEEGIEL--EMAEQSLLAIEEADVVMFLVDARAGMTAADQAIANHLRKL 109 Query: 149 A--VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S +V KID L ++ Y A EV ++ +G+ L + Sbjct: 110 NTQKSIFLVANKIDGLDADSSCA---------EFYQLALGEVYQIAASHGRGVTQLLETA 160 Query: 207 LE 208 L+ Sbjct: 161 LQ 162 >gi|77460818|ref|YP_350325.1| GTP-binding protein EngA [Pseudomonas fluorescens Pf0-1] gi|123603396|sp|Q3K7C0|DER_PSEPF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|77384821|gb|ABA76334.1| GTP-binding protein [Pseudomonas fluorescens Pf0-1] Length = 490 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + PG T+ + + N Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEDRV-IVYDQPGTTRDSIYI------PFERNDEK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV D ++ F Sbjct: 245 YTLIDTAGVRKRGKIHEEVEKFS--VVKTLQAIKDANVVIFVMDAREGVVDHDLNLLGFA 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I + K D ++P+ K + R + ++ S++ G+ L Sbjct: 303 LEAGRALVIAINKWDGMTPSERD--FVKVELQRRLFFVDFADIHFISALHGTGVGNL 357 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 62/177 (35%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A + G T+ + K + L Sbjct: 2 VPVIALVGRPNVGKSTLFNRLTRTRD-AIVGDLSGLTRDRQY------GEAKWQGRSYIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D + G DQ + L K+ Sbjct: 55 IDTGGI-----SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K+D + P A+ P IP + +GI L +A Sbjct: 110 NKRSHVVANKVDNIDPEMARAEFA---------PLGMGHAIPIAGAHGRGITQLLEA 157 >gi|255320779|ref|ZP_05361954.1| GTP-binding protein Era [Acinetobacter radioresistens SK82] gi|262379445|ref|ZP_06072601.1| GTP-binding protein Era [Acinetobacter radioresistens SH164] gi|255302156|gb|EET81398.1| GTP-binding protein Era [Acinetobacter radioresistens SK82] gi|262298902|gb|EEY86815.1| GTP-binding protein Era [Acinetobacter radioresistens SH164] Length = 342 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKSQAVYVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V ++D H Q D V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVVDA-HKWTQNDDLVLEKLKNAEM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + L + + + N+ E++P S+++ +E LR I + + Sbjct: 149 PVILVINKIDTIEEKRTLLPLIQERTKLMNF----VEIVPVSALRGANLEHLRDTIDKYL 204 >gi|28899345|ref|NP_798950.1| GTP-binding protein Era [Vibrio parahaemolyticus RIMD 2210633] gi|153839957|ref|ZP_01992624.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ3810] gi|260365942|ref|ZP_05778432.1| GTP-binding protein Era [Vibrio parahaemolyticus K5030] gi|260878964|ref|ZP_05891319.1| GTP-binding protein Era [Vibrio parahaemolyticus AN-5034] gi|260898319|ref|ZP_05906815.1| GTP-binding protein Era [Vibrio parahaemolyticus Peru-466] gi|260899640|ref|ZP_05908035.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ4037] gi|31340053|sp|Q87LP0|ERA_VIBPA RecName: Full=GTPase Era gi|28807581|dbj|BAC60834.1| GTP-binding protein Era [Vibrio parahaemolyticus RIMD 2210633] gi|149746516|gb|EDM57505.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ3810] gi|308085246|gb|EFO34941.1| GTP-binding protein Era [Vibrio parahaemolyticus Peru-466] gi|308090470|gb|EFO40165.1| GTP-binding protein Era [Vibrio parahaemolyticus AN-5034] gi|308110555|gb|EFO48095.1| GTP-binding protein Era [Vibrio parahaemolyticus AQ4037] gi|308113214|gb|EFO50754.1| GTP-binding protein Era [Vibrio parahaemolyticus K5030] Length = 320 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD------GDYQAIYVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V+ L+D H + D+ V + L K Sbjct: 82 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTKDDEMVLTKLQKSNF 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + E + + + +V+P S+ + K I+VLRK + + Sbjct: 136 PVVLCVNKVDNV--QDRNEVMLHMAEMSKKMD--FVDVVPISAKQGKNIDVLRKHVRNHL 191 >gi|13476158|ref|NP_107728.1| GTP-binding protein EngA [Mesorhizobium loti MAFF303099] gi|26006731|sp|Q986D9|DER_RHILO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|14026918|dbj|BAB53514.1| GTP-binding protei [Mesorhizobium loti MAFF303099] Length = 479 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 68/184 (36%), Gaps = 26/184 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 4 KVAIIGRPNVGKSTLFNRLVGRK-LALVDDTPGVTRDRRVHAAKLYDLH------FDVID 56 Query: 91 MPGYGYARA---PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 G+ A A P + I ++ ID + G+ D+ + K Sbjct: 57 TAGFEDAGASTLPGRMRAQTEIAIHE-------ADLIFFTIDAKSGLLPDDRTFAEIVRK 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K E ++ + E IP S+ +G+ LR A++ Sbjct: 110 SGKPVVLVANKA---------EAKGAQGGMLEAWELGLGEPIPVSAEHGQGMPDLRDAVI 160 Query: 208 ETIN 211 + Sbjct: 161 AALG 164 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 70/194 (36%), Gaps = 13/194 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P IA GR N GKS+LIN L+ + L T G T+ D+ Sbjct: 196 AEDAHTYDNTKPMRIAVVGRPNAGKSTLINALIGEERL-LTGPEAGITRDSISV---DWD 251 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 L D G + ++ + L V +++D ++ Sbjct: 252 WHGRRLKLF---DTAGMRRKARIHEKLEVMS--VQDGLRAIRFAEIVIIVLDATIPFEKQ 306 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLS--PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + ++ + I K D + E EKT+ L+ + +P S+ Sbjct: 307 DLQIADLIIREGRAPVIAFNKWDLIDHPQELLAELREKTERLLPQVRGI--QAVPVSAET 364 Query: 196 RKGIEVLRKAILET 209 +G++ L A+L T Sbjct: 365 GRGLDKLMDAVLRT 378 >gi|187734830|ref|YP_001876942.1| small GTP-binding protein [Akkermansia muciniphila ATCC BAA-835] gi|238691864|sp|B2UMV5|DER_AKKM8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|187424882|gb|ACD04161.1| small GTP-binding protein [Akkermansia muciniphila ATCC BAA-835] Length = 464 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 12/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR N GKSSL+N ++ + SN G T+ D L + P L Sbjct: 189 PIKVAVVGRPNAGKSSLVNAILRDRRT-IVSNVAGTTRDAI-----DVPYLHDGQP-YVL 241 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G +V+ + + R+ + L+ID G+ Q D+ + + ++ Sbjct: 242 IDTAGMRPRSRRDTSVEVFSAMRSEKAIRRADI--CLLVIDIAAGITQQDRRIAGIIAEE 299 Query: 149 AVSYQIVLTKIDKLSPTTAQE-TLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKA 205 I++ K D P +++ + + + +R + ++ I TS+ K +G+E++ K Sbjct: 300 GKPCIIIVNKFDLFHPNASRKDRMAEVEEQVRRELFFISYAPFIATSAKKAEGVEIIFKV 359 Query: 206 I 206 I Sbjct: 360 I 360 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 64/175 (36%), Gaps = 20/175 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P IA GR NVGKS++ N + R+ +A + PG T+ + K A Sbjct: 3 HVPTIAIVGRPNVGKSAIFNRMAGRR-IAIVHDEPGVTRDRL------SAPCKITDRACK 55 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G G AR + T + ++DCR + IDQ + L K Sbjct: 56 IMDTGGIG-ARLSDGFAEQVEAEAD---IAIKTADLILFVLDCRDHLTPIDQSIADHLRK 111 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + ++L K D ++ L + I S+ +G L Sbjct: 112 SDIPVILLLNKAD---------HEKQDLNLGEFAGLGFDDHIFLSAAHGRGFSEL 157 >gi|330830064|ref|YP_004393016.1| GTP-binding protein engA [Aeromonas veronii B565] gi|328805200|gb|AEB50399.1| GTP-binding protein engA [Aeromonas veronii B565] Length = 498 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 12/191 (6%) Query: 20 EIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 + P A P + A GR NVGKS+L N ++ + + PG T+ + Sbjct: 202 DTKETPFADLPIKFAIVGRPNVGKSTLTNRMLGEDRV-IVYDMPGTTRDSVYI------P 254 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + ++D G + V+ + +++ L L+ID + + D Sbjct: 255 MERDEQKYVVIDTAGVRRRGKVHETVEKFS--VIKTLKAIEDANVCLLVIDAQETITDQD 312 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + ++ S +V+ K D L ++ + + V S++ G Sbjct: 313 LSILGYVLHAGRSVVLVVNKWDGLDQKVKEDVKNELDRRLG--FIDFARVHFISALHGSG 370 Query: 199 IEVLRKAILET 209 + L ++I E Sbjct: 371 VGHLFESIQEA 381 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 21/175 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + K +V Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGELEFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ ++ + + L V ++D R G+ DQ + L K Sbjct: 56 DTGGI---DGTEEGIEL--KMAEQSLLAIEEADVVLFMVDARAGLTAADQAIAEHLRKAH 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V K D + +A + Y A EV ++ +G+ L + Sbjct: 111 KKVFLVANKTDGIDGDSA---------VSEFYGLALGEVYQIAAAHGRGVLSLLE 156 >gi|320157270|ref|YP_004189649.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O] gi|319932582|gb|ADV87446.1| GTP-binding protein EngA [Vibrio vulnificus MO6-24/O] Length = 496 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 204 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 256 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 257 YVLIDTAGVRRRGKVHETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 314 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 315 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 372 Query: 206 ILET 209 + E Sbjct: 373 VQEA 376 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRSRD-ALVADFPGLTRDRKY------GQAKVGEHDFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + + L K Sbjct: 55 IDTGGI---DGSEEGVET--KMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V+ K+D + A + E+ ++ +G+ L Sbjct: 110 EKATMLVVNKVDGIDADAASA---------DFWQLGVDEMYQIAAAHGRGVTAL 154 >gi|114319757|ref|YP_741440.1| GTP-binding protein EngA [Alkalilimnicola ehrlichii MLHE-1] gi|122312352|sp|Q0AB37|DER_ALHEH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|114226151|gb|ABI55950.1| small GTP-binding protein [Alkalilimnicola ehrlichii MLHE-1] Length = 467 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 11/179 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ F L+ + L+D Sbjct: 184 IAIVGRPNVGKSTLVNRLLGEERV-LVYDMPGTTRDSVFI------PLERDGRPYTLIDT 236 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + +++ L V L+ID R GV D + + + + Sbjct: 237 AGMRRRARVHETVEKFS--VIQTLKAMEAAHVVILVIDAREGVTDQDTHLIGHVLESGRA 294 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K D L+ + + + A I S++ G+ +L A+ + + Sbjct: 295 LVLAINKWDGLTAEQREAVKAGLERKLTFLNFARRHFI--SALHGSGVGLLFGAVDKAL 351 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + V K +V Sbjct: 3 PVIALVGRPNVGKSTLFNQLTRSRD-ALVADHPGLTRDRQYGVG------KVGERPYIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G + L+ + L+D R G D+++ + L ++ Sbjct: 56 DTGGLGDDPEGVEQGMHQQA-----LAAIEEADAILFLVDGRSGPTAADEELAAHLRRQG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K D + A + E +P ++ +GI L +L Sbjct: 111 KPVWLVVNKTDGVDHRLATA---------EFHALGLGEPLPIAAAHGRGIAGLMDHVL 159 >gi|168182597|ref|ZP_02617261.1| ribosome-associated GTPase EngA [Clostridium botulinum Bf] gi|237795959|ref|YP_002863511.1| GTP-binding protein EngA [Clostridium botulinum Ba4 str. 657] gi|259645868|sp|C3L0M1|DER_CLOB6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|182674194|gb|EDT86155.1| ribosome-associated GTPase EngA [Clostridium botulinum Bf] gi|229263345|gb|ACQ54378.1| ribosome-associated GTPase EngA [Clostridium botulinum Ba4 str. 657] Length = 439 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 15/169 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V DF L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERL-IVSDIPGTTRDSIDSYVNTDFGE-------FTLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ ++ + +I Y + L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTY-ASIERADVCILMIDATEGISEQDQKIIGYAHDINK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRK 197 + +++ K D + +T++K K ++ + P + + S+ + Sbjct: 289 AILVIVNKWDLVEKDD--KTMDKFKKELKVNLSFMPYAKYLFISAKTGQ 335 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K ++ + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRISIVQDTPGVTRDRI-YAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + + L+D + G+ D++V L K Sbjct: 55 MIDTGGI----EPESEDIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADKEVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KIDKL Y + + SS + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDKLKDEN---------NAYEFYNLGIGDPVTISSSQALGLGDMLDRVV 161 Query: 208 ET 209 E Sbjct: 162 EH 163 >gi|161486654|ref|NP_933563.2| GTP-binding protein EngA [Vibrio vulnificus YJ016] gi|41016999|sp|Q7MNE7|DER_VIBVY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA Length = 496 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 204 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 256 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 257 YVLIDTAGVRRRGKVHETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 314 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 315 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 372 Query: 206 ILET 209 + E Sbjct: 373 VQEA 376 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRSRD-ALVADFPGLTRDRKY------GQAKVGEHDFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + + L K Sbjct: 55 IDTGGI---DGSEEGVET--KMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V+ K+D + A + E+ ++ +G+ L Sbjct: 110 EKATMLVVNKVDGIDADAASA---------DFWQLGVDEMYQIAAAHGRGVTAL 154 >gi|27363891|ref|NP_759419.1| GTP-binding protein Der [Vibrio vulnificus CMCP6] gi|31340067|sp|Q8DF02|DER_VIBVU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|27360008|gb|AAO08946.1| GTP-binding protein EngA [Vibrio vulnificus CMCP6] Length = 496 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 204 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 256 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 257 YVLIDTAGVRRRGKVHETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 314 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 315 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 372 Query: 206 ILET 209 + E Sbjct: 373 VQEA 376 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRSRD-ALVADFPGLTRDRKY------GQAKVGEHDFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + + L K Sbjct: 55 IDTGGI---DGSEEGVET--KMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V+ K+D + A + E+ ++ +G+ L Sbjct: 110 EKATMLVVNKVDGIDADAASA---------DFWQLGVDEMYQIAAAHGRGVTAL 154 >gi|319784770|ref|YP_004144246.1| ribosome-associated GTPase EngA [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170658|gb|ADV14196.1| ribosome-associated GTPase EngA [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 477 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 68/181 (37%), Gaps = 20/181 (11%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 4 KVAIIGRPNVGKSTLFNRLVGRK-LALVDDTPGVTRDRRVHAAKLYDLH------FDVID 56 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G+ A A G + + ++ ID + G+ D+ + K Sbjct: 57 TAGFEDAGASTLP----GRMRAQTEIAIREADLIFFTIDAKSGLLPDDRTFAEIVRKSGK 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K E ++ + E IP S+ +G+ LR A++ + Sbjct: 113 PVVLVANKA---------EAKGAQGGMLEAWELGLGEPIPVSAEHGQGMPDLRDAVIGAL 163 Query: 211 N 211 Sbjct: 164 G 164 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 68/186 (36%), Gaps = 13/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA GR N GKS+LIN L+ + L T G T+ D+ L Sbjct: 202 DTKPMRIAVVGRPNAGKSTLINALIGEERL-LTGPEAGITRDSISV---DWDWHGRRLKL 257 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 D G + ++ + L V +++D ++ D + + Sbjct: 258 F---DTAGMRRKARIHEKLEVMS--VQDGLRAIRFAEIVIIVLDATIPFEKQDLQIADLI 312 Query: 146 DKKAVSYQIVLTKIDKLS--PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + I K D + E EKT+ L+ + +P S +G++ L Sbjct: 313 IREGRAPVIAFNKWDLIDHPQELLAELREKTERLLPQARGL--QAVPVSGETGRGLDKLM 370 Query: 204 KAILET 209 A++ T Sbjct: 371 DAVIRT 376 >gi|260775207|ref|ZP_05884105.1| GTP-binding protein Era [Vibrio coralliilyticus ATCC BAA-450] gi|260608908|gb|EEX35070.1| GTP-binding protein Era [Vibrio coralliilyticus ATCC BAA-450] Length = 324 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 18/198 (9%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F E+ +A GR NVGKS+L+N ++ +K ++ TS P T+H V Sbjct: 15 FFSSSGEVSSPENQHCGFVAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGVD 73 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRH 132 + VD PG + + L+ R + S + V+ L+D H Sbjct: 74 TE------GDYQAIYVDTPGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH 122 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D+ V + L K + + K+D + + + + + +V+P S Sbjct: 123 -WTKDDEMVLTKLQKSNFPVVLCVNKVDNV--QDRNDVMLHMMDMSKK--MEFVDVVPIS 177 Query: 193 SVKRKGIEVLRKAILETI 210 + + K I+VLRK + E + Sbjct: 178 AKQGKNIDVLRKHVREHL 195 >gi|71898142|ref|ZP_00680328.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Ann-1] gi|71732116|gb|EAO34172.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Ann-1] Length = 465 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + IAF GR NVGKS+L+N L+ + + S+ PG T+ +L+ + Sbjct: 175 DSERIHIAFVGRPNVGKSTLVNRLLGEERM-IVSDVPGTTRDSI------TVDLERDEFR 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++ V+ + + L + LL+D GV D V + + Sbjct: 228 YRLVDTAGLRRKSKVEEAVEKFSAF--KTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D L+ ++ + + EV+ S+ G+ L +A Sbjct: 286 LDAGKALVVAMNKWDGLATYQREQAEDLLSRKLG--FVNWAEVVRLSAKHGSGLRELFRA 343 Query: 206 I 206 I Sbjct: 344 I 344 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + + P A+ Sbjct: 2 LPLVALVGRPNVGKSTLFNALTLTRD-ALVHDQPGVTRDRHYGVCR-----IDGQPLFAV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + +++ R G +D D+ ++L K Sbjct: 56 VDTGGMVGKEDGLAGATARQARL-----AAAEADVLLFVVNVREGASALDDDILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ KID +S TT +V+P S+ R+G++ L + +L Sbjct: 111 SQPTLLVINKIDGVSDTTVHSEFAHY---------GFSDVVPVSAAHRQGLDDLIEQVLA 161 Query: 209 TI 210 + Sbjct: 162 WL 163 >gi|261493816|ref|ZP_05990330.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261310519|gb|EEY11708.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 511 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 219 EDKNIKIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQ 271 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L ID R G+ D + F+ Sbjct: 272 YTIIDTAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFI 329 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D LS + + + V S++ G+ L + Sbjct: 330 LNAGRSLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 387 Query: 206 ILET 209 + E Sbjct: 388 VKEA 391 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAGY------DFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLLPADVGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G IE + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLAP 161 Query: 206 ILETIN 211 + E +N Sbjct: 162 LGEQLN 167 >gi|260773381|ref|ZP_05882297.1| GTP-binding protein EngA [Vibrio metschnikovii CIP 69.14] gi|260612520|gb|EEX37723.1| GTP-binding protein EngA [Vibrio metschnikovii CIP 69.14] Length = 496 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 204 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMQRDDRE 256 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ + V+ + +V+ L V L+ID R + D + F Sbjct: 257 YVLIDTAGVRRRKSINETVEKFS--VVKTLKAIEDANVVLLVIDARENISDQDLSLLGFT 314 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D LS + ++ + + S++ G+ L ++ Sbjct: 315 LNAGRSVVIAINKWDGLSNDIKERVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 372 Query: 206 ILET 209 + E Sbjct: 373 VQEA 376 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 23/183 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGENEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAQQSLAAIDEADVVLFMVDGRAGLTSADEAIAQHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K+D + A + + Y A + +G+ VL I Sbjct: 110 EKNAILVVNKVDGIDADAACAEFWQLGMGSQMYQIA--------AAHGRGVAVL---IDR 158 Query: 209 TIN 211 +N Sbjct: 159 ALN 161 >gi|71274603|ref|ZP_00650891.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Dixon] gi|71900907|ref|ZP_00683022.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Ann-1] gi|170730865|ref|YP_001776298.1| GTP-binding protein EngA [Xylella fastidiosa M12] gi|238687938|sp|B0U489|DER_XYLFM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71164335|gb|EAO14049.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Dixon] gi|71729319|gb|EAO31435.1| Small GTP-binding protein domain:GTP-binding [Xylella fastidiosa Ann-1] gi|167965658|gb|ACA12668.1| GTP-binding protein [Xylella fastidiosa M12] Length = 465 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + IAF GR NVGKS+L+N L+ + + S+ PG T+ +L+ + Sbjct: 175 DSERIHIAFVGRPNVGKSTLVNRLLGEERM-IVSDVPGTTRDSI------TVDLERDEFR 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++ V+ + + L + LL+D GV D V + + Sbjct: 228 YRLVDTAGLRRKSKVEEAVEKFSAF--KTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D L+ ++ + + EV+ S+ G+ L +A Sbjct: 286 LDAGKALVVAMNKWDGLATYQREQAEDLLSRKLG--FVNWAEVVRLSAKHGSGLRELFRA 343 Query: 206 I 206 I Sbjct: 344 I 344 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + + P A+ Sbjct: 2 LPLVALVGRPNVGKSTLFNALTLTRD-ALVHDQPGVTRDRHYGVCR-----IDGQPLFAV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + V +++ R G +D D+ ++L K Sbjct: 56 VDTGGMVGKEDGLAGATARQARL-----AAAEADVVLFVVNVREGASALDDDILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ KID +S TT +V+P S+ R+G++ L + +L Sbjct: 111 SQPTLLVINKIDGVSDTTVHSEFAHY---------GFSDVVPVSAAHRQGLDDLIEQVLA 161 Query: 209 TI 210 + Sbjct: 162 WL 163 >gi|261495041|ref|ZP_05991508.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309283|gb|EEY10519.1| putative GTP-binding protein [Mannheimia haemolytica serotype A2 str. OVINE] Length = 504 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 212 EDKNIKIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQ 264 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L ID R G+ D + F+ Sbjct: 265 YTIIDTAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFI 322 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D LS + + + V S++ G+ L + Sbjct: 323 LNAGRSLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 380 Query: 206 ILET 209 + E Sbjct: 381 VKEA 384 Score = 95.2 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 68/181 (37%), Gaps = 25/181 (13%) Query: 35 SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGY 94 GR NVGKS+L N L ++ A ++ PG T+ + ++D G Sbjct: 1 MGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAGY------DFIVIDTGGI 53 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 ++ V+ + + L V L+D R G+ D + +L ++ + + Sbjct: 54 ---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLLPADVGIAQYLRQREKTTVV 108 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKAILETI 210 V K D + + + Y EV ++ + +G IE + + E + Sbjct: 109 VANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLAPLGEQL 159 Query: 211 N 211 N Sbjct: 160 N 160 >gi|28199496|ref|NP_779810.1| GTP-binding protein EngA [Xylella fastidiosa Temecula1] gi|182682229|ref|YP_001830389.1| GTP-binding protein EngA [Xylella fastidiosa M23] gi|32129520|sp|Q87B41|DER_XYLFT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238691082|sp|B2I7V0|DER_XYLF2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|28057611|gb|AAO29459.1| GTP-binding protein [Xylella fastidiosa Temecula1] gi|182632339|gb|ACB93115.1| small GTP-binding protein [Xylella fastidiosa M23] gi|307578503|gb|ADN62472.1| GTP-binding protein EngA [Xylella fastidiosa subsp. fastidiosa GB514] Length = 465 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + IAF GR NVGKS+L+N L+ + + S+ PG T+ +L+ + Sbjct: 175 DSERIHIAFVGRPNVGKSTLVNRLLGEERM-IVSDVPGTTRDSI------TVDLERDELR 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++ V+ + + L + LL+D GV D V + + Sbjct: 228 YRLVDTAGLRRKSKVEEAVEKFSAF--KTLQAIEQCQVAVLLLDAGEGVTDQDATVLAAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D L+ ++ + + EV+ S+ G+ L +A Sbjct: 286 LDAGKALVVAMNKWDGLATYQREQAEDLLSRKLG--FVNWAEVVRLSAKHGSGLRELFRA 343 Query: 206 I 206 I Sbjct: 344 I 344 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + + P A+ Sbjct: 2 LPLVALVGRPNVGKSTLFNALTLTRD-ALVHDQPGVTRDRHYGVCR-----IDGQPLFAV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + V +++ R G +D D+ ++L K Sbjct: 56 VDTGGMVGKEDGLAGATARQARL-----AVAEADVVLFVVNVREGASALDDDILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ KID +S TT +V+P S+ R+G++ L + +L Sbjct: 111 SQPTLLVINKIDGVSDTTVHSEFAHY---------GFSDVVPVSAAHRQGLDDLIEQVLA 161 Query: 209 TI 210 + Sbjct: 162 WL 163 >gi|261253899|ref|ZP_05946472.1| GTP-binding protein Era [Vibrio orientalis CIP 102891] gi|260937290|gb|EEX93279.1| GTP-binding protein Era [Vibrio orientalis CIP 102891] Length = 325 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H V + VD Sbjct: 34 VAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGVDTE------GDYQAIYVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V+ L+D H D+ V + L K Sbjct: 87 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTADDEMVLTKLQKSNF 140 Query: 151 SYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D + +++ + +V+P S+ K I+VLRK + E Sbjct: 141 PVVLCVNKVDVVQDRNDVMMHMQEMSSKM-----DFVDVVPISAKHGKNIDVLRKHVREH 195 Query: 210 I 210 + Sbjct: 196 L 196 >gi|256827122|ref|YP_003151081.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Cryptobacterium curtum DSM 15641] gi|256583265|gb|ACU94399.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Cryptobacterium curtum DSM 15641] Length = 444 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 10/181 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A GR N GKSSL N+L +R + + S+ G T+ + + + A Sbjct: 178 DDEIINVAIIGRPNAGKSSLTNML-SRNDRSIVSDVAGTTRDAI------DTLVAHEGRA 230 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++V+ +G VR + V L++D G+ DQ + F Sbjct: 231 YRLVDTAGLRRKSKIDEDVEYYG--FVRSMRAIDRADVVLLMVDGTLGLTDQDQRIAGFA 288 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + IVL K D + +E + + V+ S++ K + +A Sbjct: 289 HERGCAMVIVLNKWDIVEGADRKEAVRDQITESLRF-VGFAPVVAVSALTGKNTHRIWEA 347 Query: 206 I 206 I Sbjct: 348 I 348 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 68/180 (37%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ +N +V + A G T+ + + D++ L+D Sbjct: 6 VAVVGRPNVGKSTFVNRIV-HSDEAIVHAMRGVTRDRS-YHDADWNGHH-----FTLIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + + + LL+D R G+ D++V L ++ Sbjct: 59 GGIEMG----DEDAFQTSIRNQAFTAARECDVILLLVDGRTGITADDEEVARILRREKAP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K+D L+ + Y + P S++ G L A++ ++ Sbjct: 115 VLVVVNKLD---------NLDTADAMYEFYRLGLGDPWPISAIHGTGTGDLLDAVVAELD 165 >gi|37197696|dbj|BAC93534.1| predicted GTP-binding protein [Vibrio vulnificus YJ016] Length = 511 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 219 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 271 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 272 YVLIDTAGVRRRGKVHETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 329 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 330 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 387 Query: 206 ILET 209 + E Sbjct: 388 VQEA 391 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 17 IPVVALVGRPNVGKSTLFNRLTRSRD-ALVADFPGLTRDRKY------GQAKVGEHDFIV 69 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + + L K Sbjct: 70 IDTGGI---DGSEEGVET--KMAEQSLAAIREADVVLFMVDGRAGLTPSDEAIAAHLRKI 124 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V+ K+D + A + E+ ++ +G+ L Sbjct: 125 EKATMLVVNKVDGIDADAASA---------DFWQLGVDEMYQIAAAHGRGVTAL 169 >gi|120554059|ref|YP_958410.1| GTP-binding protein EngA [Marinobacter aquaeolei VT8] gi|166225823|sp|A1TZQ4|DER_MARAV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120323908|gb|ABM18223.1| small GTP-binding protein [Marinobacter aquaeolei VT8] Length = 473 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 23/190 (12%) Query: 22 GLLPKAGPPE------------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN 69 LLP+ PE I GR NVGKS+L+N ++ + + PG T+ + Sbjct: 157 ALLPEPENPEDQDRADRYPGIRIGVVGRPNVGKSTLVNRMLGEDRVV-VYDMPGTTRD-S 214 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID 129 ++P + + L+D G + ++ V+ + I++ L V L+ID Sbjct: 215 VYIPYERQGHE-----YTLIDTAGVRRRKNVREAVEKFS--IIKTLQAIDDAHVVILVID 267 Query: 130 CRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI 189 R G+ D + F+ S I + K D + P E+ + A I Sbjct: 268 AREGLVDQDLHLIGFVLDAGRSLVIAINKWDGMDPEDRDRVKEQVARRLDFLDYADKYYI 327 Query: 190 PTSSVKRKGI 199 S++ G+ Sbjct: 328 --SALHGTGV 335 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + ++ A ++ PG T+ + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNQMTRSRD-ALVADFPGLTRDRKYGEGN------YEGQKFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + + V L+D R G+ D+ + +L K Sbjct: 56 DTGGL-----TGDEAGIDAEMARQSMQAVEEADIVLFLVDGRAGLTAGDEMIADYLRKSG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K D P A Y ++ +GI L +A+L Sbjct: 111 KQAHLVVNKTDGQDPDVAAA---------DFYSLGFESTFLIAAAHNRGILSLLEALL 159 >gi|167854675|ref|ZP_02477455.1| GTP-binding protein EngA [Haemophilus parasuis 29755] gi|167854212|gb|EDS25446.1| GTP-binding protein EngA [Haemophilus parasuis 29755] Length = 504 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 68/184 (36%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +IA GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 212 DDKNIKIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQ 264 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L ID R GV D + F+ Sbjct: 265 YTIIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARDGVSDQDLSLLGFI 322 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D LS + + V S++ G+ L + Sbjct: 323 LNAGKSLVIVVNKWDGLSQDIKDNVKSELDRRLD--FIDFARVHFISALHGSGVGNLFSS 380 Query: 206 ILET 209 I E Sbjct: 381 IQEA 384 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 25/185 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L +N A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRN-ALVADFPGLTRDRKYGHANIAG------HDFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIKEADVVLFLVDARAGLLPADVGIAQYLRQRN 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + ++ Y EV P ++ + +G IE + Sbjct: 111 KTTVVVANKTDGIDADS---------HIAEFYQLGLGEVEPIAAAQGRGVTQLIEQVLAP 161 Query: 206 ILETI 210 + E + Sbjct: 162 LAEKL 166 >gi|258542805|ref|YP_003188238.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-01] gi|256633883|dbj|BAH99858.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-01] gi|256636942|dbj|BAI02911.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-03] gi|256639995|dbj|BAI05957.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-07] gi|256643051|dbj|BAI09006.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-22] gi|256646106|dbj|BAI12054.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-26] gi|256649159|dbj|BAI15100.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-32] gi|256652146|dbj|BAI18080.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655203|dbj|BAI21130.1| GTP-binding protein EngA [Acetobacter pasteurianus IFO 3283-12] Length = 472 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 69/187 (36%), Gaps = 20/187 (10%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP P + +GR NVGKS+L N LV R+ A ++ PG T+ V Sbjct: 7 LPTGDMPVVVIAGRPNVGKSTLFNRLVGRRQ-ALVADTPGVTRDRKEGVALIRGRY---- 61 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + L+D G A AP+ +G + S V +D R G+ D+ Sbjct: 62 --VRLIDTAGLEEA-APESL---FGRMRFSSESAVREADLVLFCVDARAGITPADEHFAQ 115 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ ++ ++ K E + Y E + S+ +G+ L Sbjct: 116 WIRRQNRPVLLIANKS---------EGRLGAASAMEAYALGLGEPLALSAEHGEGVTDLM 166 Query: 204 KAILETI 210 I + + Sbjct: 167 WEIADRL 173 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 69/186 (37%), Gaps = 10/186 (5%) Query: 25 PKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P+ P +A GR N GKS+L+N L+ + + T G T+ KD + Sbjct: 200 PRPIGPLRVAIVGRPNAGKSTLMNALLGEERM-ITGPEAGLTRDSIAVTLKDGDD----- 253 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 +VD G ++++ + + L++D GV + D + Sbjct: 254 -TFEIVDTAGLRKKARIDESLEKMS--VSAAIEALKMAEVAVLVLDATLGVHEQDLQIAR 310 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++++ + + L K D + TA + I V+ S++ I L Sbjct: 311 LIEREGRACVLALNKWDAVQDRTATRNAILDRLSISLAQMRGVPVVTFSALTGASIHKLL 370 Query: 204 KAILET 209 A+ + Sbjct: 371 PAVRDA 376 >gi|219870952|ref|YP_002475327.1| GTP-binding protein EngA [Haemophilus parasuis SH0165] gi|254783156|sp|B8F4X7|DER_HAEPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219691156|gb|ACL32379.1| GTP-binding protein EngA [Haemophilus parasuis SH0165] Length = 504 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 68/184 (36%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +IA GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 212 DDKNIKIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQ 264 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L ID R GV D + F+ Sbjct: 265 YTIIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARDGVSDQDLSLLGFI 322 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D LS + + V S++ G+ L + Sbjct: 323 LNAGKSLVIVVNKWDGLSQDIKDNVKSELDRRLD--FIDFARVHFISALHGSGVGNLFSS 380 Query: 206 ILET 209 I E Sbjct: 381 IQEA 384 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 25/185 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L +N A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRN-ALVADFPGLTRDRKYGHANIAG------HDFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIKEADVVLFLVDARAGLLPADVGIAQYLRQRN 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + ++ Y EV P ++ + +G IE + Sbjct: 111 KTTVVVANKTDGIDADS---------HIAEFYQLGLGEVEPIAAAQGRGVTQLIEQVLAP 161 Query: 206 ILETI 210 + E + Sbjct: 162 LAEKL 166 >gi|307610240|emb|CBW99801.1| hypothetical protein LPW_15641 [Legionella pneumophila 130b] Length = 462 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 77/194 (39%), Gaps = 15/194 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + E+ +IAF+GR NVGKS+LIN ++ + + + PG T+ Sbjct: 163 ITEMHEATDDKAIKIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRDSISI------ 215 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 L+D G + ++ + +++ L LL+D G+ Sbjct: 216 PFTREDKQYVLIDTAGVRRKSRIDEKIEKFS--VIKTLQAIKEAHVCLLLLDANEGITDQ 273 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVK 195 D ++ F+ + + I + K D L +E EK K + R + ++ S++ Sbjct: 274 DMNLLGFIIESGKALVIAVNKWDGLE----EEHKEKIKSELSRRLHFANFAKIRFISALH 329 Query: 196 RKGIEVLRKAILET 209 G+ L K I E Sbjct: 330 GSGVGGLFKDINEA 343 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 21/180 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N + ++ A ++ PG T+ + + ++ + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRITKTQD-ALVADFPGLTRDRQY------GHAQHENKSFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G G + S + + + L+D R G+ IDQ + L K Sbjct: 55 VDTGGIGVDDIEVDTLMSRQSQV-----ALNEANVILFLVDGRSGLTGIDQQIAQALRKL 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K D ++ A + ++ S+ GI L + ILE Sbjct: 110 NKKVHLVVNKTDGINEDIACADFQSL---------GITDIHAISASHGGGISSLLEEILE 160 >gi|328474122|gb|EGF44927.1| GTPase Era [Vibrio parahaemolyticus 10329] Length = 303 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D VD Sbjct: 12 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD------GDYQAIYVDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V+ L+D H + D+ V + L K Sbjct: 65 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTKDDEMVLTKLQKSNF 118 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + E + + + +V+P S+ + K I+VLRK + + Sbjct: 119 PVVLCVNKVDNV--QDRNEVMLHMAEMSKKMD--FVDVVPISAKQGKNIDVLRKHVRNHL 174 >gi|54294416|ref|YP_126831.1| GTP-binding protein EngA [Legionella pneumophila str. Lens] gi|81822385|sp|Q5WWG8|DER_LEGPL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|53754248|emb|CAH15725.1| hypothetical protein lpl1485 [Legionella pneumophila str. Lens] Length = 462 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 77/194 (39%), Gaps = 15/194 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + E+ +IAF+GR NVGKS+LIN ++ + + + PG T+ Sbjct: 163 ITEMHEATDDKAIKIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRDSISI------ 215 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 L+D G + ++ + +++ L LL+D G+ Sbjct: 216 PFTREDKQYVLIDTAGVRRKSRIDEKIEKFS--VIKTLQAIKEAHVCLLLLDANEGITDQ 273 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVK 195 D ++ F+ + + I + K D L +E EK K + R + ++ S++ Sbjct: 274 DMNLLGFIIESGKALVIAVNKWDGLE----EEHKEKIKSELSRRLHFANFAKIRFISALH 329 Query: 196 RKGIEVLRKAILET 209 G+ L K I E Sbjct: 330 GSGVGGLFKDINEA 343 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 21/180 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N + ++ A ++ PG T+ + + ++ + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRITKTQD-ALVADFPGLTRDRQY------GHAQHENKSFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G G + S + + + L+D R G+ IDQ + L K Sbjct: 55 VDTGGIGVDDIEVDTLMSKQSQV-----ALNEANVILFLVDGRSGLTGIDQQIAQALRKL 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K D ++ A + ++ S+ GI L + ILE Sbjct: 110 NKKVHLVVNKTDGINEDIACADFQSL---------GITDIHAISASHGGGISSLLEEILE 160 >gi|30248403|ref|NP_840473.1| tRNA modification GTPase TrmE [Nitrosomonas europaea ATCC 19718] gi|46577435|sp|Q82XA1|MNME_NITEU RecName: Full=tRNA modification GTPase mnmE gi|30138289|emb|CAD84297.1| GTP-binding protein (HSR1-related):tRNA modification GTPase TrmE [Nitrosomonas europaea ATCC 19718] Length = 451 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 25/184 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 ++ +G+ NVGKSSL+N L + +A ++ PG T+ +++ + L Sbjct: 215 GIKVVLAGQPNVGKSSLLNRLAGDE-VAIVTDIPGTTRDTV------RQSIEIEGIPLHL 267 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G R V+ G I R + V LL+D RHGV + D+ V + L ++ Sbjct: 268 IDTAG---LRETSDIVEQHG--IARTYAAIEQADLVLLLVDSRHGVTEEDRSVLTRLPER 322 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + V KID + LE+ I S++ +GIE+LR A+L+ Sbjct: 323 -LPVLTVHNKIDL---SAQPPRLEE---------NTSGPTIYLSAINGEGIELLRAALLK 369 Query: 209 TINY 212 T + Sbjct: 370 TAGW 373 >gi|152995389|ref|YP_001340224.1| small GTP-binding protein [Marinomonas sp. MWYL1] gi|189037150|sp|A6VV10|DER_MARMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|150836313|gb|ABR70289.1| small GTP-binding protein [Marinomonas sp. MWYL1] Length = 445 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ I GR NVGKS+L+N ++ + + PG T+ + N Sbjct: 176 ESRGIRIGVVGRPNVGKSTLVNRMLGEDRVV-VYDMPGTTRDSVYI------PYVRNDKE 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + K+ V+ + IV+ L V ++ID + + D + ++ Sbjct: 229 YTLIDTAGIRRRKHVKEAVEKFS--IVKALQAIQDANVVIVVIDSHENLVEQDLHMIGYV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 I + K D L + + + + P + +V S++ G+ L Sbjct: 287 LDAGRGVIIAINKWDGLKKDDREHIKSEVERRLGFVP--YAKVHYISALHGTGVGDLYDT 344 Query: 206 ILET 209 I T Sbjct: 345 IEST 348 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 21/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + K + Sbjct: 2 IPVIALVGRPNVGKSTLFNQLTRSRD-ALVADYPGLTRDRKY------GDGKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D RHG+ D+ + S L + Sbjct: 55 IDTGGI-----SGDEQGIDEKMARQSLLAIEEADVVLFLVDGRHGLNPADEMIASHLRRS 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K D ++ A L Y E+ P ++ KG+ VL + Sbjct: 110 NKQVSLVVNKTDGINEDIA---------LADFYSLGFGELHPIAASHGKGVHVLIDKV 158 >gi|260913735|ref|ZP_05920211.1| ribosome-associated GTPase EngA [Pasteurella dagmatis ATCC 43325] gi|260632274|gb|EEX50449.1| ribosome-associated GTPase EngA [Pasteurella dagmatis ATCC 43325] Length = 511 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 69/184 (37%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 219 QDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSIYI------PMERDGQH 271 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L ID R GV D + F+ Sbjct: 272 YTIIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDAREGVSDQDLSLLGFI 329 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D L+ + + + V S++ G+ L + Sbjct: 330 LNAGRSLVIVVNKWDGLNQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 387 Query: 206 ILET 209 I E Sbjct: 388 IKEA 391 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 26/187 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQANIAGY------DFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLTSADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI----EVLRK 204 +V K D + + + Y E+ ++ + +G+ E + Sbjct: 112 NKITVLVANKTDGIDADS---------HCAEFYQLGLGEIAQIAASQGRGVSALMEQVLA 162 Query: 205 AILETIN 211 I E +N Sbjct: 163 PIAERMN 169 >gi|291563224|emb|CBL42040.1| ribosome-associated GTPase EngA [butyrate-producing bacterium SS3/4] Length = 441 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P IA G+ NVGKSS+IN L+ + SN G T+ + + N Sbjct: 174 EDDRPRIAIVGKPNVGKSSIINKLLGENRV-IVSNIAGTTRDAV------DTEIVRNGTE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K++++ + I+R ++ V ++ID G+ + D + Sbjct: 227 YIFIDTAGLRRKSKIKEDIERYS--IIRTVTAVERADVVLMVIDAVEGITEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 + +V+ K D + +T+ + ++ + P E I S++ + +E L Sbjct: 285 HDRGKGVIVVVNKWDAIEKND--KTIYEYTRKLKETLSYMPYAEYIFVSALTGQRMEKLF 342 Query: 204 KAI 206 + I Sbjct: 343 ELI 345 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + +N L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAG-STISIVKDTPGVTRDRIYADCTWLNN------NFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + T + ++D R G+ D V L K Sbjct: 57 DTGGI----EPDSKDIILAQMREQAQIAIDTADVIIFIVDVRQGLVDADSKVADMLRKSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D + + Y + +P S+ R G+ L +++ Sbjct: 113 KPVVLAVNKVD--------SMAKFGNDVYEFYNLGIGDPVPVSAASRLGLGELLDEVVKY 164 >gi|332703981|ref|ZP_08424069.1| GTP-binding protein engA [Desulfovibrio africanus str. Walvis Bay] gi|332554130|gb|EGJ51174.1| GTP-binding protein engA [Desulfovibrio africanus str. Walvis Bay] Length = 443 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 11/189 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L VPE L IAF G+ N GKSSL+N L + S G T+ Sbjct: 165 LADVPEEEDLTAEQGLRIAFLGKPNAGKSSLVNSLTGSDRV-IVSPVAGTTRDSV----- 218 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + VD G + N++ + L R L + L++D + G+ Sbjct: 219 -DVTFEVEGKRYTFVDTAGVRKRTKIEDNLEQFSVL--RALKASKKAQITVLVLDAQAGM 275 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ + SFL+K+ + V+ K+D + + E K + ++ V TS++ Sbjct: 276 TTQDKKLLSFLEKEKTPFIAVINKMDLVPRDERKVAREHYKKELSI--ASYAPVTFTSAM 333 Query: 195 KRKGIEVLR 203 G+ L Sbjct: 334 TGVGVAELL 342 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 25/182 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L+ R+ A T + PG T+ + + +A VD Sbjct: 5 VAIIGRPNVGKSTLFNRLLRREA-AITHDRPGVTRDRIY------AETDLGGRKVAFVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLR---CVYLLIDCRHGVKQIDQDVFSFLDKK 148 G ++ V+ I + R ++ + L++D R G+ +D+ V +F+ Sbjct: 58 GGLEM----EEQVEDIQAAI--FAQAREAVKESHGILLVMDGREGLTALDERVAAFIRTS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + KID E ++ + ++ S+ GI LR+ I + Sbjct: 112 NKPVLLAVNKID---------GSENADLMLAEFHGLGFPLLAVSASHGHGITTLREQIAD 162 Query: 209 TI 210 + Sbjct: 163 FL 164 >gi|221066038|ref|ZP_03542143.1| small GTP-binding protein [Comamonas testosteroni KF-1] gi|220711061|gb|EED66429.1| small GTP-binding protein [Comamonas testosteroni KF-1] Length = 446 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A +GR N GKS+LIN + + L + PG T+ + N Sbjct: 177 DQKPVRLAVAGRPNAGKSTLINTWLGEERLV-AFDMPGTTRDAI------TVPFERNGQK 229 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L V LLID GV D + ++ Sbjct: 230 FELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYI 287 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + S + + K D + Q + + + S+ KR+G+E L K+ Sbjct: 288 LESGRSVVLAINKWDAVDDYQRQMLERSIETRLS--FLKFAPLHFISAQKRQGLEPLWKS 345 Query: 206 ILET 209 I++ Sbjct: 346 IIQA 349 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ G T+ + + + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGQGRQGKHEYIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + + V ++D R G+ D ++ ++L + Sbjct: 56 DTGGF----EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K E ++ L Y EV+P S+ +G+ L A L Sbjct: 112 KPTILVANKA---------EGMKDGAQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGL 162 Query: 210 IN 211 +N Sbjct: 163 LN 164 >gi|85544494|pdb|2CXX|A Chain A, Crystal Structure Of A Probable Gtp-Binding Protein Engb gi|85544495|pdb|2CXX|B Chain B, Crystal Structure Of A Probable Gtp-Binding Protein Engb gi|85544496|pdb|2CXX|C Chain C, Crystal Structure Of A Probable Gtp-Binding Protein Engb Length = 190 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 26/192 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F+GRSNVGKS+LI L +K R PG T+ + ++ N K ++D Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKK--VRRGKRPGVTRKIIEI---EWKNHK-------IIDX 51 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDC-----------RHGVKQID 138 PG+G+ PK+ + IV ++ + L++D + G ID Sbjct: 52 PGFGFXXGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPID 111 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + FL + + + + K+DK+ K+ + IP S+ Sbjct: 112 VEFYQFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEV-PLSEIDKVFIPISAKFGDN 170 Query: 199 IEVLRKAILETI 210 IE L+ I E I Sbjct: 171 IERLKNRIFEVI 182 >gi|89901081|ref|YP_523552.1| GTP-binding protein EngA [Rhodoferax ferrireducens T118] gi|122479081|sp|Q21W32|DER_RHOFD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|89345818|gb|ABD70021.1| Small GTP-binding protein domain [Rhodoferax ferrireducens T118] Length = 447 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G ++A +GR NVGKS+LIN + + L + PG T+ + N Sbjct: 176 EPGIIKLAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRDAI------SVPFERNGQK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G + ++ + +V+ L + V LLID GV D + ++ Sbjct: 229 FELVDTAGLRRRGKVFEAIEKFS--VVKTLQAIESSNVVLLLIDATQGVTDQDAHIAGYI 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I + K D + + + + + S+ KR+G+ L + Sbjct: 287 LENGRAVVIAVNKWDAVDEYQRELVKRSIETRLP--FLKFATMHLISATKRQGLGPLWAS 344 Query: 206 ILET 209 I + Sbjct: 345 IAQA 348 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + A ++ G T+ + + N K ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGNAKQGKHEFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ A + + + + V ++D R G+ D ++ +L + Sbjct: 56 DTGGFEPDAAGG----IFKEMAKQTTQAVAEADVVIFVVDAREGISAQDHEIAKYLRRLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + K E + L+ + EV S+ +GI L Sbjct: 112 KPCVLAANKA---------EGMLAGAQLVEFFELGLGEVHAISAAHGQGIRTL 155 >gi|113969576|ref|YP_733369.1| GTP-binding protein EngA [Shewanella sp. MR-4] gi|117919682|ref|YP_868874.1| GTP-binding protein EngA [Shewanella sp. ANA-3] gi|123029832|sp|Q0HKV5|DER_SHESM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225858|sp|A0KUJ9|DER_SHESA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|113884260|gb|ABI38312.1| small GTP-binding protein [Shewanella sp. MR-4] gi|117612014|gb|ABK47468.1| small GTP-binding protein [Shewanella sp. ANA-3] Length = 488 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 72/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 195 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRDSIYI------PMERDGRE 247 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + ++ + +++ L V L+ID R G+ + D + F Sbjct: 248 YVIIDTAGVRRRSKVHEVIEKFS--VIKTLKAVEDANVVLLIIDAREGIAEQDLGLLGFA 305 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 306 LNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLFES 363 Query: 206 ILETIN 211 I E + Sbjct: 364 IEEAYD 369 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAFLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V + D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--KMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V KID + Sbjct: 110 QKTTFVVANKIDGID 124 >gi|117620764|ref|YP_856299.1| GTP-binding protein EngA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166224301|sp|A0KJ48|DER_AERHH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|117562171|gb|ABK39119.1| GTP-binding protein EngA [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 499 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 72/191 (37%), Gaps = 12/191 (6%) Query: 20 EIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 + P A P + A GR NVGKS+L N ++ + + PG T+ + Sbjct: 202 DTKETPFADLPIKFAIVGRPNVGKSTLTNRMLGEDRV-IVYDMPGTTRDSVYI------P 254 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + ++D G + V+ + +++ L L+ID + + D Sbjct: 255 MERDEQKYVIIDTAGVRRRGKVHETVEKFS--VIKTLKAIEDANVCLLVIDAQETITDQD 312 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S +V+ K D L ++ + + V S++ G Sbjct: 313 LSILGFVLNTGRSVVLVVNKWDGLDQKVKEDVKNELDRRLG--FIDFARVHFISALHGSG 370 Query: 199 IEVLRKAILET 209 + L ++I E Sbjct: 371 VGHLFESIQEA 381 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 21/175 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + K +V Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGELEFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ ++ + + L V ++D R G+ DQ + L K Sbjct: 56 DTGGI---DGTEEGIEL--KMAEQSLLAIEEADVVLFMVDARAGLTAADQAIAEHLRKTH 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V K D + +A + Y A EV ++ +G+ L + Sbjct: 111 KKVFLVANKTDGIDGDSA---------VSEFYGLALGEVYQMAAAHGRGVLSLLE 156 >gi|15837067|ref|NP_297755.1| GTP-binding protein EngA [Xylella fastidiosa 9a5c] gi|26006743|sp|Q9PG37|DER_XYLFA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|9105311|gb|AAF83275.1|AE003896_12 GTP-binding protein [Xylella fastidiosa 9a5c] Length = 465 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + IAF GR NVGKS+L+N L+ + + S+ PG T+ +L+ + Sbjct: 175 DSERIHIAFVGRPNVGKSTLVNRLLGEERM-IVSDVPGTTRDSI------TVDLERDECR 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++ V+ + + L + LL+D GV D V + + Sbjct: 228 YRLVDTAGLRRKSKVEEAVEKFSAF--KTLQVIEQCQVAVLLLDAGEGVTDQDATVLAAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D L ++ + + EV+ S+ G+ L +A Sbjct: 286 LDAGKALVVAMNKWDGLGTYQREQAEDLLSRKLG--FVNWAEVVRLSAKHGSGLRELFRA 343 Query: 206 I 206 I Sbjct: 344 I 344 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + + P A+ Sbjct: 2 LPLVALVGRPNVGKSTLFNALTLTRD-ALVHDQPGVTRDRHYGVCR-----IDGQPLFAV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + V +++ R GV +D D+ ++L K Sbjct: 56 VDTGGMVGKEDGLAGATARQARL-----AAAEADVVLFVVNVREGVSALDDDILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ KID +S T +V+P S+ R+G++ L + +L Sbjct: 111 SQPTLLVINKIDGVSDATVHSEFAHY---------GFSDVVPVSAAHRQGLDDLIEQVLA 161 Query: 209 TI 210 + Sbjct: 162 WL 163 >gi|256599907|pdb|3IEV|A Chain A, Crystal Structure Of Era In Complex With Mggnp And The 3' End Of 16s Rrna Length = 308 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 13/180 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+L+N L+ K ++ S G T+ V N + +D Sbjct: 13 VAIVGKPNVGKSTLLNNLLGTK-VSIISPKAGTTRMRVLGVKNIP-----NEAQIIFLDT 66 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS-FLDKKAV 150 PG PKK+ ++ + +ID G + D++++ F+ Sbjct: 67 PGIY---EPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNK 123 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KIDK+ P A+ L + + +P E++P S++K ++ L K IL+ + Sbjct: 124 PVIVVINKIDKIGP--AKNVLPLIDEIHKKHPE-LTEIVPISALKGANLDELVKTILKYL 180 >gi|83590169|ref|YP_430178.1| small GTP-binding protein domain-containing protein [Moorella thermoacetica ATCC 39073] gi|123524458|sp|Q2RIV4|DER_MOOTA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|83573083|gb|ABC19635.1| Small GTP-binding protein domain [Moorella thermoacetica ATCC 39073] Length = 438 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++A GR NVGKSSL+N L+ + + S+ PG T+ + ++ Sbjct: 172 EGDALKVAIVGRPNVGKSSLVNRLLGEERV-IVSDLPGTTRDAV------DTYIRRGERE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + L R L V +++D GV + D+ + + Sbjct: 225 YILIDTAGMRRKSRITVPTERYSVL--RALRAVERADVVLVILDGTEGVTEQDKKIAGYG 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 +K + IV+ K D + T++ + +R A+ V+ S++ + ++ + Sbjct: 283 HEKGKATIIVVNKWDLVPKDER--TMDHYREAVRQELSFMAYAPVLFISALTGQRVDQVL 340 Query: 204 KAI 206 I Sbjct: 341 MTI 343 Score = 107 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 66/181 (36%), Gaps = 20/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + + +A + PG T+ + + + LV Sbjct: 4 PIVAIIGRPNVGKSTLFNRITGGR-VAIVEDTPGVTRDRLY------RDAEWCGRQFTLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G A ++ + + + L+D R G+ D+++ + L + Sbjct: 57 DTGGI----ATHQDDPLVARVRSQAEQALKEADVIIFLVDSRTGITADDEEIAALLRRSD 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K++ S T Y + +P S+ L ++E Sbjct: 113 RPVILVANKVEDFSDPTVTH---------EFYRLGLGDPVPISAAHGLNTGDLLDRVVEL 163 Query: 210 I 210 + Sbjct: 164 L 164 >gi|113474219|ref|YP_720280.1| GTP-binding protein EngA [Trichodesmium erythraeum IMS101] gi|123161345|sp|Q119L7|DER_TRIEI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|110165267|gb|ABG49807.1| small GTP-binding protein [Trichodesmium erythraeum IMS101] Length = 453 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 9/197 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + +P G + + +IA GR NVGKSSL+N + K A S G T+ Sbjct: 162 ITYLPTQGEITETNQTKIAIVGRPNVGKSSLLNSFIGEKR-AIVSPISGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ N L+D G + + + +G I R V +ID GV Sbjct: 216 -DTVVERNGKTYRLIDTAGIRKKKNVEYGAEFFG--INRAFKAIRRAEVVMFVIDALDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + DQ + + + + + IV+ K D + + + R Y E+I S++ Sbjct: 273 TEQDQKLANRIIEDGRACVIVVNKWDAIEKDNYTIYTYEQEVRSRLYFVEWAEMIFVSAL 332 Query: 195 KRKGIEVLRKAILETIN 211 K +E + I N Sbjct: 333 TGKRVEKIINLIDNAAN 349 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 70/182 (38%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+++N L K+ A + PG T+ + + N + Sbjct: 3 LPIVAIIGRPNVGKSTIVNRLAESKD-AIVHDEPGITRD------RTYRNAYWEDREFQV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + N + + + ++ ++D + G+ D+++ +L ++ Sbjct: 56 VDTGGLVF----DDNTEFLPLIREQAMAALVEASVAIFVVDGQTGLTGGDEEIAQWLRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K + ++ Q + + E P S + G L ++ Sbjct: 112 TIPILLAVNKCESITEGLTQAAM--------FWELGLGEPYPISGIHGNGTGELLDDLIT 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|312881717|ref|ZP_07741494.1| GTP-binding protein Era [Vibrio caribbenthicus ATCC BAA-2122] gi|309370607|gb|EFP98082.1| GTP-binding protein Era [Vibrio caribbenthicus ATCC BAA-2122] Length = 325 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 24/192 (12%) Query: 26 KAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + PE IA GR NVGKS+L+N ++ +K ++ TS P T+H V Sbjct: 22 PSSEPENQRCGFIAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGVDT----- 75 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQID 138 VD PG + + L+ R + S + V+ L+D H D Sbjct: 76 -QGDFQAIYVDTPGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTDDD 128 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + V + L K + + K+D + + + + + +V+P S+ K Sbjct: 129 EMVLTKLQKSNFPVVLCVNKVDNVP--DRNQVMMHMMDMSKK--MEFVDVVPISAKHGKN 184 Query: 199 IEVLRKAILETI 210 I+VLR+ + + + Sbjct: 185 IDVLREHVRKHL 196 >gi|255728533|ref|XP_002549192.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240133508|gb|EER33064.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 316 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 34/188 (18%) Query: 29 PPEIAFSGRSNVGKSSLINILV-------NRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 PE+ G +N GKSSLIN L+ LA S G T+ +N F + Sbjct: 153 LPEVLLIGHTNAGKSSLINRLLLDKQKLKRSDQLAYVSARAGFTKTMNCFTVSN------ 206 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + +VD PG+G+ + G +++ Y+ R+ L+ VY LID G+++ D + Sbjct: 207 ---KLRIVDSPGFGWHGE-----EVQGKMVIDYIERRNVLKMVYFLIDTTVGLREEDTVI 258 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L + V + ++ TK+D + T ++ + + R + S K GI+ Sbjct: 259 IDHLIESGVPFSLIFTKVD--NRKTVEKLIATFDFTCRKF---------ISDEK--GIKD 305 Query: 202 LRKAILET 209 +R ++LE Sbjct: 306 IRVSMLEA 313 >gi|226324619|ref|ZP_03800137.1| hypothetical protein COPCOM_02403 [Coprococcus comes ATCC 27758] gi|225207067|gb|EEG89421.1| hypothetical protein COPCOM_02403 [Coprococcus comes ATCC 27758] Length = 442 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 74/185 (40%), Gaps = 9/185 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A G+ NVGKSS+IN L+ K+ S+ G T+ + + +N Sbjct: 174 EDDRPRVAIVGKPNVGKSSIINRLIG-KDRVIVSDIAGTTRDAI------DTEVVHNGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ V ++ID GV + D + Sbjct: 227 YVFIDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDAAEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ IV+ K D + + + + + E++ S++ + + L Sbjct: 285 HERGKGVIIVVNKWDAIEKNDKTTREYEHQIRMVLSFLPYAEIMYVSALTGQRLPKLFDM 344 Query: 206 ILETI 210 I I Sbjct: 345 IDTVI 349 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K +A + PG T+ + L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEK-IAIVKDTPGVTRDRIYAEVNWLDK------EFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + T + + D + G+ D V L + Sbjct: 57 DTGGI----EPDSRDVILSQMREQAQIAIDTADVILFMTDVKQGLVDSDSKVADMLRRSH 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D + + Y + +P S+ +R GI + +L Sbjct: 113 KPVILVVNKVDNFNK--------MMPDVYEFYNLGIGDPVPISASERIGIGDMLDKVL 162 >gi|322514868|ref|ZP_08067886.1| ribosome-associated GTPase EngA [Actinobacillus ureae ATCC 25976] gi|322119172|gb|EFX91317.1| ribosome-associated GTPase EngA [Actinobacillus ureae ATCC 25976] Length = 505 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 213 EDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDGQQ 265 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L ID R G+ D + F+ Sbjct: 266 YTIIDTAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFI 323 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D LS + + + V S++ G+ L + Sbjct: 324 LNAGRSLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 381 Query: 206 ILET 209 + E Sbjct: 382 VKEA 385 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 71/186 (38%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + +V Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAGY------DFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLLPADIGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G IE + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLAT 161 Query: 206 ILETIN 211 + E +N Sbjct: 162 LGEQLN 167 >gi|170076756|ref|YP_001733394.1| GTP-binding protein EngA [Synechococcus sp. PCC 7002] gi|238692797|sp|B1XLH8|DER_SYNP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169884425|gb|ACA98138.1| GTPase of unknown function [Synechococcus sp. PCC 7002] Length = 453 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 9/191 (4%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P I + + +A GR NVGKSSL+N L + A S G T+ + Sbjct: 166 PTITDVEEDTTINVAIIGRPNVGKSSLLNALTGEQR-AIVSPISGTTRDAI------DTI 218 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ N L+D G + + + I R V +ID GV + D Sbjct: 219 IERNGQQYRLIDTAGIRRKKNVDYGAEFFS--INRAFKAIRRADVVLFVIDVLDGVTEQD 276 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + + + IV K D + T + + R + E++ S+ + Sbjct: 277 LKLAGRIIDEGRAVIIVANKWDAVEKDTYTINQYRKELQARLFFMEWAEMLFISAQTGQR 336 Query: 199 IEVLRKAILET 209 + + + + Sbjct: 337 VNKILDLVDQA 347 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 21/183 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L+N + + A + PG T+ + + + Sbjct: 3 LPIIAVIGRPNVGKSTLVNRIAGDQQ-AIVHDQPGITRD------RTYRPGFWQDRNFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLI-VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 VD G + + + + LI + + ++D + G+ DQ++ +L + Sbjct: 56 VDTGGIVF-----DDHEEFLPLIREQAAIALAEAAVALFVVDGQAGLNAADQEIADWLRQ 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + V + + K + L Q + E P S++ G L ++ Sbjct: 111 QNVPVVLAVNKCESLEQGYTQAA--------EFWELGMEEPFPISAIHGSGTGDLLDKVI 162 Query: 208 ETI 210 E + Sbjct: 163 EYL 165 >gi|153939462|ref|YP_001391817.1| GTP-binding protein EngA [Clostridium botulinum F str. Langeland] gi|166224329|sp|A7GGA7|DER_CLOBL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|152935358|gb|ABS40856.1| ribosome-associated GTPase EngA [Clostridium botulinum F str. Langeland] gi|295319842|gb|ADG00220.1| ribosome-associated GTPase EngA [Clostridium botulinum F str. 230613] Length = 439 Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 15/183 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V +F L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERL-IVSDIPGTTRDSIDSYVDTEFGE-------FTLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ ++ + +I Y + L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTY-ASIERADVCILMIDATEGISEQDQKIIGYAHDINK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAILE 208 + +++ K D + +T++K K ++ + P + + S+ + I + + E Sbjct: 289 AILVIVNKWDLVEKDD--KTMDKFKKELKVNLSFMPYAKYLFISAKTGQRIVKVLQTAKE 346 Query: 209 TIN 211 + Sbjct: 347 CYD 349 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVQDTPGVTRDRI-YAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G PK + + + L+D + G+ D++V L K Sbjct: 55 MIDTGGI----EPKSEDIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KIDKL Y + + SS + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDKLKDEN---------NAYEFYNLGIGDPVTISSSQALGLGDMLDRVV 161 Query: 208 ET 209 E Sbjct: 162 EY 163 >gi|332711902|ref|ZP_08431832.1| ribosome-associated GTPase EngA [Lyngbya majuscula 3L] gi|332349230|gb|EGJ28840.1| ribosome-associated GTPase EngA [Lyngbya majuscula 3L] Length = 463 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 5/199 (2%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVP 73 + +P + +P+ ++A GR NVGKSSL+N L + S G T+ ++ V Sbjct: 162 VTYLPNVDNIPEIPEIKVAIVGRPNVGKSSLLNTLTGENR-SIVSPISGTTRDAIDMVVQ 220 Query: 74 KDFSNLKNNLPAMA-LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + K L+D G + + +G I R V L+ID Sbjct: 221 RSADPEKGTEAQTYRLIDTAGIRKKKNVTYGPEFFG--INRAFKAIRRSDVVLLVIDAID 278 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 GV + DQ + + + + IV+ K D + + + + R E+I S Sbjct: 279 GVTEQDQKLAGRIADEGRAAVIVVNKWDAIEKDSYTIYDYQKQVKDRLSFIEWAEIIFVS 338 Query: 193 SVKRKGIEVLRKAILETIN 211 ++ K +E + + N Sbjct: 339 AMTGKRVETILDLVDTAAN 357 Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 69/182 (37%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A N PG T+ + + + Sbjct: 3 LPIVAVIGRPNVGKSTLVNRLAGVTD-AIVHNQPGVTRD------RTYRAAFWQDRDYLV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + N + + + ++ + L++D + G D+ + +L + Sbjct: 56 VDTGGLVF----DDNTEFLPLIREQAMAALAEASAAVLVVDGQAGPTAGDEAIAQWLRIQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K + Q + +++ + E P S++ G L + ++ Sbjct: 112 NTPVVLAVNKC----ESPQQGIILASQF----WELNLGEPFPVSAIHGNGTGELLEKLVT 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|15606987|ref|NP_214369.1| GTP-binding protein Era [Aquifex aeolicus VF5] gi|3913584|sp|O67800|ERA_AQUAE RecName: Full=GTPase Era gi|2984240|gb|AAC07768.1| GTP-binding protein Era [Aquifex aeolicus VF5] Length = 301 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 13/180 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+L+N L+ K ++ S G T+ V N + +D Sbjct: 6 VAIVGKPNVGKSTLLNNLLGTK-VSIISPKAGTTRMRVLGVKNIP-----NEAQIIFLDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS-FLDKKAV 150 PG PKK+ ++ + +ID G + D++++ F+ Sbjct: 60 PGIY---EPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNK 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KIDK+ P A+ L + + +P E++P S++K ++ L K IL+ + Sbjct: 117 PVIVVINKIDKIGP--AKNVLPLIDEIHKKHPE-LTEIVPISALKGANLDELVKTILKYL 173 >gi|282860196|ref|ZP_06269270.1| ribosome-associated GTPase EngA [Prevotella bivia JCVIHMP010] gi|282587017|gb|EFB92248.1| ribosome-associated GTPase EngA [Prevotella bivia JCVIHMP010] Length = 437 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P A GR N GKSSLIN + + G T+ + F Sbjct: 172 EEDIPRFAVVGRPNAGKSSLINAFIGEDRN-IVTEIAGTTRDSIYTRYNKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L+ID G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVSEDLEFYSVM--RSIRSIENSDVCILMIDATRGIEAQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 + S +V+ K D + P Q+ ++ IRN P +I S++ ++ I Sbjct: 283 QRNNKSLVVVVNKWDLV-PDKDQKVIDTFTNAIRNRMAPFVDFPIIFASALTKQRI 337 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 62/179 (34%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-KTRHAIVSDVAGTTRDRQY------GKCTWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V ++D GV D+DV L + + Sbjct: 58 GG----WVVKSDDIFEDAIRQQVLVATEEADLVLFVVDTETGVTDWDEDVALILRRTKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y + I S+ G L +LE + Sbjct: 114 VLLVANKVD---------NSGEYYTSAEFYKLGLGDPICISAQTGGGTGDLLDILLEKM 163 >gi|23006723|ref|ZP_00048912.1| COG0218: Predicted GTPase [Magnetospirillum magnetotacticum MS-1] Length = 110 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 46/104 (44%), Positives = 62/104 (59%) Query: 107 WGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT 166 W LI YL RS L VY+LID RHG+K ID D+ LDK AVSYQ+VLTK D+L + Sbjct: 2 WTKLIHAYLKGRSNLARVYVLIDSRHGLKSIDTDLLDGLDKAAVSYQVVLTKGDELKKSE 61 Query: 167 AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++ + + P A+PEV+ TSS +G+ LR +I + Sbjct: 62 IDRRIQGIQAALAKRPAAYPEVLLTSSRDDRGVAELRASIARLL 105 >gi|212634303|ref|YP_002310828.1| GTP-binding protein EngA [Shewanella piezotolerans WP3] gi|226741196|sp|B8CKR5|DER_SHEPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|212555787|gb|ACJ28241.1| GTP-binding protein EngA [Shewanella piezotolerans WP3] Length = 490 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 71/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 196 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRDSIYI------PMEREGRE 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +++ L V L+ID R G+ + D + F Sbjct: 249 YVLIDTAGVRRRSKVHETVEKFS--VIKTLKAVEDCNVVLLIIDAREGIAEQDLGLLGFA 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 307 LNAGRALVIAVNKWDGIDQEVKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLYES 364 Query: 206 ILETIN 211 I E + Sbjct: 365 IEEAYD 370 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAHLAGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V + D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--RMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 EKTTFVVANKVDGID 124 >gi|323499982|ref|ZP_08104938.1| GTPase Era [Vibrio sinaloensis DSM 21326] gi|323314948|gb|EGA68003.1| GTPase Era [Vibrio sinaloensis DSM 21326] Length = 325 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H V + VD Sbjct: 34 VAIVGRPNVGKSTLLNRILGQK-ISITSRKPQTTRHRIMGVDTE------GDYQAIYVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V+ L+D H D+ V + L K Sbjct: 87 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTNDDEMVLTKLQKSNF 140 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + + + + + +V+P S+ K I+VLRK + + + Sbjct: 141 PVVLCVNKVDNV--QDRNDVMLHMMEMSKKMD--FVDVVPISAKHGKNIDVLRKHVRDHL 196 >gi|241950009|ref|XP_002417727.1| conserved hypothetical protein [Candida dubliniensis CD36] gi|223641065|emb|CAX45439.1| conserved hypothetical protein [Candida dubliniensis CD36] Length = 363 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 49/218 (22%) Query: 29 PPEIAFSGRSNVGKSSLINILV-------NRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 PE+ F G +NVGKSSLIN L+ LA S G T+ +N F N Sbjct: 158 LPEVLFMGHTNVGKSSLINSLLVNNKSISGPSQLAYVSARAGFTKTINCF---------N 208 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + ++D PGYG K+ G ++V Y+S+R L+ VY+LID G ++ D + Sbjct: 209 FSKKLRIIDSPGYGQYGDLKQ-----GRVVVDYISKRHQLKKVYVLIDSVEGFREEDSYI 263 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTA------------------QETLEKTKYLIRNYPT 183 F+ L + V + I+ TK+D + + ++ LI + Sbjct: 264 FNMLIDEGVPFDIIFTKVDSVVSKYIPKNAFEASNCYDLIKACNDKVVDHYGKLIASSGL 323 Query: 184 AHPEVIPT------SSVKR----KGIEVLRKAILETIN 211 +IPT S+ K G+ ++ IL++ N Sbjct: 324 EDIAMIPTFLFSNASANKFVPKPVGMNEIQSNILDSCN 361 >gi|298387730|ref|ZP_06997281.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 1_1_14] gi|298259586|gb|EFI02459.1| ribosome biogenesis GTP-binding protein YsxC [Bacteroides sp. 1_1_14] Length = 185 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 1/147 (0%) Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP-KKNVDSWGGLIVRYLSERST 120 P RT KD + + R K D +I Y+ ER Sbjct: 29 PQRTGDDLRHTGKDNAYQPLPDQPKLVPGRSSRIRLRQTRTKGKDQIRTIIEDYILEREQ 88 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + +++LID R ++ID + +L + + + I+ TK DKL + + + Sbjct: 89 MTNLFVLIDSRLEPQKIDLEFMEWLGENGIPFSIIFTKADKLKGGRLKMNINNYLRELSK 148 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 P +SS R G + I Sbjct: 149 EWEELPPYFVSSSENRTGRTEILDYIE 175 >gi|304414053|ref|ZP_07395421.1| GTP-binding protein [Candidatus Regiella insecticola LSR1] gi|304283267|gb|EFL91663.1| GTP-binding protein [Candidatus Regiella insecticola LSR1] Length = 491 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 11/196 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 G+ E P+ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 191 TGLEEDNFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERV-IVYDLPGTTRDSIYI---- 245 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + N L+D G + V+ + +++ L V L+ID + G+ Sbjct: 246 --PMTRNERQYILIDTAGVRKRGKVTQTVEKFS--VIKTLKAIEDSNVVLLVIDAQDGIS 301 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + F+ S IV+ K D + Q K + +R + S+++ Sbjct: 302 DQDLSLLGFILNSGRSLVIVINKWDGIQAEDRQRV--KNELDLRLNFIDFARIHFISALR 359 Query: 196 RKGIEVLRKAILETIN 211 G+ L K++ E + Sbjct: 360 VSGVGNLFKSVCEAYD 375 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 21/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A S+ PG T+ + +F + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNHLTRTRS-ALVSDFPGLTRDRQ-YGRAEFESHEFIVIDTGG 59 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD ++ V++ + + L V ++D R G+ DQ++ L + Sbjct: 60 VD--------GTEQGVETL--MASQALLAIEEADIVLFIVDGRAGMLPADQEITQHLRNR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S +++ K D ++ +A + Y EV ++ +G+ L + + Sbjct: 110 QKSTFLLVNKTDGINSDSA---------IADFYSLGLGEVYAIAASHGRGVAQLLERV 158 >gi|319794354|ref|YP_004155994.1| ribosome-associated GTPase enga [Variovorax paradoxus EPS] gi|315596817|gb|ADU37883.1| ribosome-associated GTPase EngA [Variovorax paradoxus EPS] Length = 447 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 11/183 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P ++A +GR NVGKS+LIN + + L + PG T+ + N Sbjct: 178 NKPIKLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDAI------SVPFERNGQRF 230 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ + +V+ L + V LL+D GV D + ++ Sbjct: 231 ELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYIL 288 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + I + K D + ++ + + + + S++KR+G+ + +AI Sbjct: 289 ESGRAVVIAINKWDAVDSYQREQIQRQIETRLP--FLKFASLHFISAIKRQGLGPVWQAI 346 Query: 207 LET 209 + Sbjct: 347 AQA 349 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 68/182 (37%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ G T+ + + N + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTQTRD-AIVADYAGLTRD------RHYGNGRLGKHEFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + + + V ++D R G+ D D+ + L + Sbjct: 56 DTGGFEPDAGSG----IYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + K E + L+ Y +V S+ +G+ L + LE Sbjct: 112 KPCVLAANKA---------EGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVELALEP 162 Query: 210 IN 211 +N Sbjct: 163 LN 164 >gi|145299527|ref|YP_001142368.1| GTP-binding protein EngA [Aeromonas salmonicida subsp. salmonicida A449] gi|166224302|sp|A4SNZ8|DER_AERS4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|142852299|gb|ABO90620.1| GTP-binding protein EngA [Aeromonas salmonicida subsp. salmonicida A449] Length = 499 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 72/191 (37%), Gaps = 12/191 (6%) Query: 20 EIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 + P A P + A GR NVGKS+L N ++ + + PG T+ + Sbjct: 202 DTKETPFADLPIKFAIVGRPNVGKSTLTNRMLGEDRV-IVYDMPGTTRDSVY------VP 254 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 ++ + ++D G + V+ + +++ L L+ID + + D Sbjct: 255 MERDEQKYVVIDTAGVRRRGKVHETVEKFS--VIKTLKAIEDANVCLLVIDAQETITDQD 312 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F+ S +V+ K D L ++ + + V S++ G Sbjct: 313 LSILGFVLHSGRSVVLVVNKWDGLDQKVKEDVKNELDRRLG--FIDFARVHFISALHGSG 370 Query: 199 IEVLRKAILET 209 + L ++I E Sbjct: 371 VGHLFESIQEA 381 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 68/175 (38%), Gaps = 21/175 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + K +V Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGELEFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ ++ + + L V ++D R G+ DQ + + L K Sbjct: 56 DTGGI---DGTEEGIEL--KMAEQSLLAIEEADVVLFMVDARAGLTAADQAIAAHLRKTH 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V K D + +A + Y A +V ++ +G+ L + Sbjct: 111 KKVFLVANKTDGIDGDSA---------VSEFYCLALGDVYQIAAAHGRGVLSLLE 156 >gi|91227851|ref|ZP_01262024.1| GTP-binding protein Era [Vibrio alginolyticus 12G01] gi|269965786|ref|ZP_06179883.1| GTP-binding protein [Vibrio alginolyticus 40B] gi|91188361|gb|EAS74657.1| GTP-binding protein Era [Vibrio alginolyticus 12G01] gi|269829654|gb|EEZ83891.1| GTP-binding protein [Vibrio alginolyticus 40B] Length = 320 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 24/192 (12%) Query: 26 KAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + PE IA GR NVGKS+L+N ++ +K ++ TS P T+H V D Sbjct: 17 EPSSPENQHCGFIAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTD---- 71 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQID 138 VD PG + + L+ R + S + V+ L+D H + D Sbjct: 72 --GDYQAIYVDTPGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTKDD 123 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + V + L K + + K+D + + + + + +V+P S+ + K Sbjct: 124 EMVLTKLQKSNFPVVLCVNKVDNV--QDRNDVMLHMAEMSKKMD--FVDVVPISAKQGKN 179 Query: 199 IEVLRKAILETI 210 I+VLRK + + Sbjct: 180 IDVLRKHVRNHL 191 >gi|89095338|ref|ZP_01168256.1| GTP-binding protein EngA [Oceanospirillum sp. MED92] gi|89080413|gb|EAR59667.1| GTP-binding protein EngA [Oceanospirillum sp. MED92] Length = 479 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 11/182 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N ++ + + G T+ + + L+D Sbjct: 183 KIAVVGRPNVGKSTLVNRMLGEDRVV-VFDKAGTTRDSVYI------PYVRDDKNYTLID 235 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + + + + IV+ L + V +ID R GV + D + SF+ Sbjct: 236 TAGVRRRKNITEAAEKFS--IVKTLQAVNDAHVVVFVIDAREGVTEQDMHMLSFVIDTGR 293 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 S I L K D ++ E+ + + ++ S++ + + ++ E Sbjct: 294 SLVIALNKWDGMNGEEKARVKEQVERKLE--FAEFADMHFISALHGSNVGNMYDSVDEAY 351 Query: 211 NY 212 Y Sbjct: 352 EY 353 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 19/174 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + L N + Sbjct: 2 LPVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRDRKYGEGR----LANEEQDYIV 56 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L V ++D R G+ D+ + ++L + Sbjct: 57 VDTGGI-----TGDEQGIDYEMAKQSLQAVDEADVVLFIVDGRAGINPADEMIANYLRRS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V+ K D L+P + Y + P ++ +G+ L Sbjct: 112 EKPFYLVVNKTDGLNPDIV---------VADFYELGFGQPFPIAASHGRGVTQL 156 >gi|119471071|ref|ZP_01613630.1| GTP-binding protein EngA [Alteromonadales bacterium TW-7] gi|119445911|gb|EAW27192.1| GTP-binding protein EngA [Alteromonadales bacterium TW-7] Length = 488 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 11/183 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P ++A GR NVGKS+L N ++ + + + PG T+ + + N Sbjct: 199 DKPVKLAIIGRPNVGKSTLTNRILGEERV-IVYDMPGTTRDSIYI------PMTRNEKEY 251 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + V+ + +++ L V L++D R G+ D + F Sbjct: 252 VLIDTAGVRKRKKVSDVVEKFS--VIKTLQAIEDCNVVLLVVDARDGISDQDLSLLGFAL 309 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S I + K D L KT+ R + S++ G+ L +++ Sbjct: 310 NSGRSLVIAVNKWDGLDDYVKDRI--KTELDRRLGFIDFARLHFISALHGTGVGHLFESV 367 Query: 207 LET 209 E Sbjct: 368 DEA 370 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 68/177 (38%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 LPVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQAN------YDGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ ++ + + L V L+D R G+ DQ + + L K+ Sbjct: 55 VDTGGI---DGTEEGIEI--EMADQSLLAIEEADIVLFLVDARVGMTVADQAIANHLRKQ 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K D + + Y + E+ ++ +GI +L + Sbjct: 110 DKKCFVVANKTDGIDADS---------NCAEFYQLSLGEIHHIAAAHGRGITLLLEH 157 >gi|28210831|ref|NP_781775.1| GTP-binding protein EngA [Clostridium tetani E88] gi|37999662|sp|Q895X8|DER_CLOTE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|28203269|gb|AAO35712.1| GTP-binding protein [Clostridium tetani E88] Length = 438 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 13/181 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + IAF G+ NVGKSSLIN ++ + SN PG T+ S L+ + Sbjct: 173 EDEYIRIAFVGKPNVGKSSLINKILGEERN-IVSNIPGTTRDAI------DSFLERDEDK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K ++ + + +R+ LLID G+ + D+ + + Sbjct: 226 FILIDTAGLRRRSKVKDQIERYSTVRTYAAIDRAD--VCILLIDAEEGISEQDKKIIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 + + +V+ K D + T T+ + K +++ ++ I S+ + + + Sbjct: 284 HELNKALMVVVNKWDLIEKET--NTMNRFKKELQSELSFMSYAPYIFISAKTGQRVGKVL 341 Query: 204 K 204 Sbjct: 342 D 342 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 20/181 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + ++ N Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVEDTPGVTRDRI-YAQAEWLNHN-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + + ++D + G+ D +V L K Sbjct: 55 IIDTGGI----EPESEDIIVAQMRRQAEMAIEMADVIMFIVDGKEGLTPADNEVALMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID++ E+ + Y E S+ + G+ + I+ Sbjct: 111 SKKPIVLVVNKIDRI---------EEEDNMYEFYNLGIGEPTTISASQALGLGDMLDKIV 161 Query: 208 E 208 E Sbjct: 162 E 162 >gi|33239840|ref|NP_874782.1| GTP-binding protein EngA [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|41017014|sp|Q7VDI8|DER_PROMA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|33237366|gb|AAP99434.1| Predicted GTPase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 456 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 9/177 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKSSL+N + K A S G T+ +++ Sbjct: 174 EEEPIQVAIVGRPNVGKSSLLNAICGEKR-AIVSAIRGTTRDTI------DTSIVREGKL 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ + +G I R L+ID GV + DQ + + Sbjct: 227 WKLIDTAGIRRRKSVNYGPEFFG--INRSFKAIERSDVCVLVIDALDGVTEQDQRLAGRI 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ + +V+ K D + T L + + + Y +++ TS++ + I+ + Sbjct: 285 EEEGRACLVVVNKWDAVEKDTYTMPLMEKELRSKLYFLDWAQMLFTSALTGQRIDPI 341 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 31/188 (16%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A + PG T+ ++ + L Sbjct: 3 RPIVAIIGRPNVGKSTLVNRLC-QSREAIVHDQPGVTRDRSY------QDGFWGDREFKL 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFS 143 VD G + + + + E++ L L++D + G+ D+ + + Sbjct: 56 VDTGGLVFDDETEFLPE---------IREQANLALSEASIALLIVDGQQGLTAADEVIAA 106 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKGIEVL 202 +L + + K E++E + + E P S++ G L Sbjct: 107 WLRHSKCEILLAVNKC---------ESVELGLSMAGEFWRLGLGEPYPVSAIHGAGTGEL 157 Query: 203 RKAILETI 210 ++ + Sbjct: 158 LDRLISIL 165 >gi|241764499|ref|ZP_04762520.1| small GTP-binding protein [Acidovorax delafieldii 2AN] gi|241366083|gb|EER60680.1| small GTP-binding protein [Acidovorax delafieldii 2AN] Length = 462 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 20/196 (10%) Query: 23 LLPKAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 LP+ E +A +GR NVGKS+LIN + + L + PG T+ Sbjct: 179 HLPEPDDAEQAADKGTIKLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDAI---- 233 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N LVD G + ++ + +V+ L + V LL+D G Sbjct: 234 --TVPFERNGQRFELVDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQG 289 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V D + ++ + + + + K D + Q + + A + S+ Sbjct: 290 VTDQDAHIAGYILESGRAVVLAVNKWDAVDEYQRQLLERSIETRLAFLKFAA--LHFISA 347 Query: 194 VKRKGIEVLRKAILET 209 KR+G+ L +I++ Sbjct: 348 KKRQGLGPLWASIVQA 363 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 70/185 (37%), Gaps = 26/185 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ G T+ + + N K ++ Sbjct: 18 PVIALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGNGKQGKHEYIVI 70 Query: 90 DMPGYGY---ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + ++ + + V ++D R GV D D+ ++L Sbjct: 71 DTGGFEPDASSGIYREMAKQTQQAV-------AEADVVIFVVDARAGVSAQDHDIANYLR 123 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V K E + + L Y EV P S+ +GI L Sbjct: 124 RLGKPCVLVANKA---------EGMLQGGQLAEFYELGLGEVYPVSAAHGQGIRGLVDLA 174 Query: 207 LETIN 211 LE ++ Sbjct: 175 LEPLH 179 >gi|148979611|ref|ZP_01815616.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3] gi|145961696|gb|EDK26993.1| GTP-binding protein EngA [Vibrionales bacterium SWAT-3] Length = 493 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + + + Sbjct: 202 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMSRDERE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L+ID R + D + F Sbjct: 255 YVLIDTAGVRRRKNINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + ++ + + S++ G+ L ++ Sbjct: 313 LNAGRSIVIAVNKWDGLDNDVKERVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 12/139 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAQLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQL 109 Query: 149 AVSYQIVLTKIDKLSPTTA 167 +V+ K+D + P A Sbjct: 110 EKPSMLVVNKVDGIDPDAA 128 >gi|322494400|emb|CBZ29702.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 775 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 23/173 (13%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S+ +F + L+ V + LP+ PE+ F G+ GKSSLI+ L++ L + Sbjct: 56 LSNEVFGRGN-RHLKNVETLTALPEGLHSFPEVCFIGKPGCGKSSLISCLLHNHRLGKAG 114 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPK-----KNVDSWGGLIVRY 114 G T+ L FF D A+ LVD PGYG R + + ++ RY Sbjct: 115 ATAGTTRLLQFFNVGD---------ALLLVDTPGYGAWRGREVGQRLAEQANAFSILFRY 165 Query: 115 LSERS--TLRCVYLLIDCR----HGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 L+ R+ L+ VY L++ + D+++ +FL ++ + + +VLTKID+ Sbjct: 166 LTLRNGGNLKRVYWLMESSARTPVSFQPRDEELLTFLSRERIPFSVVLTKIDR 218 >gi|319943736|ref|ZP_08018017.1| GTP-binding protein EngA [Lautropia mirabilis ATCC 51599] gi|319742969|gb|EFV95375.1| GTP-binding protein EngA [Lautropia mirabilis ATCC 51599] Length = 504 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKS+LIN L+ + L N PG T+ + + L+D Sbjct: 240 VAVVGRPNGGKSTLINALLGEERL-IAFNQPGTTRDSI------TVDFRYRNRDYQLIDT 292 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + +V+ L L+ID G+ + D + ++ + + Sbjct: 293 AGLRRRGKVHETVEKFS--VVKTLQAIEDCNVAVLMIDAADGISEQDSAIAGYILEAGRA 350 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I L K D + + L++ + + Y ++ S++K + ++ L KA+ E Sbjct: 351 LVIALNKWDAVPADERRNVLQECQRRL--YFLDWAPMLTISALKNRALDKLMKAVDEA 406 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 70/187 (37%), Gaps = 28/187 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA GR NVGKS+L N L ++ A +N PG T+ + + + + Sbjct: 2 NPSVPVIALVGRPNVGKSTLFNRLTRSRD-ALVANIPGLTRD------RHYGSATLDGQR 54 Query: 86 MALVDMPGYGYARAP----KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G+ A + + +I V ++D R G+ D+++ Sbjct: 55 VVLIDTGGFEPVAATGVAEQMARQTRQAVIEA--------DVVVFVVDGRQGLLARDEEI 106 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 L + A + + K + +S A + +P S+ G+ Sbjct: 107 AQELRRTARKVVLAVNKCEGISRPVAAA---------EFHALGLGVPMPISATHGDGVHA 157 Query: 202 LRKAILE 208 L + LE Sbjct: 158 LMEECLE 164 >gi|170757031|ref|YP_001782064.1| GTP-binding protein EngA [Clostridium botulinum B1 str. Okra] gi|229710728|sp|B1IIN2|DER_CLOBK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169122243|gb|ACA46079.1| ribosome-associated GTPase EngA [Clostridium botulinum B1 str. Okra] Length = 439 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 15/169 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V +F L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERL-IVSDIPGTTRDSIDSYVDTEFGE-------FTLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ ++ + +I Y + L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTY-ASIERADVCILMIDATEGISEQDQKIIGYAHDINK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRK 197 + +++ K D + +T++K K ++ + P + + S+ + Sbjct: 289 AILVIVNKWDLVEKDD--KTMDKFKKELKVNLSFMPYAKYLFISAKTGQ 335 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVQDTPGVTRDRI-YAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + + L+D + G+ D++V L K Sbjct: 55 MIDTGGI----EPESEDIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KIDKL Y + + SS + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDKLKDEN---------NAYEFYNLGIGDPVTISSSQALGLGDMLDRVV 161 Query: 208 ET 209 E Sbjct: 162 EY 163 >gi|322501965|emb|CBZ37049.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 775 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 25/200 (12%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S+ +F + L+ V + LP+ PE+ F G+ GKSSLI+ L++ L + Sbjct: 56 LSNEVFGRGN-RHLKNVEMLTALPEGLHSFPEVCFIGKPGCGKSSLISCLLHNHRLGKAG 114 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPK-----KNVDSWGGLIVRY 114 G T+ L FF D A+ LVD PGYG R + + ++ RY Sbjct: 115 ATAGTTRLLQFFNVGD---------ALLLVDTPGYGGWRGREMGQRLAEQANAFSILFRY 165 Query: 115 LSER--STLRCVYLLIDCR----HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 L+ R S L+ VY L++ + D+++ +FL ++ + + +VLTKID+ A+ Sbjct: 166 LALRNGSNLKRVYWLMESSARTPVSFQPRDEELLTFLSRERIPFSVVLTKIDRHWRHYAE 225 Query: 169 ETLEKTKYLIRNYPTAHPEV 188 + ++T + HP V Sbjct: 226 Q--QRTADRVGKDGFVHPRV 243 >gi|262368561|ref|ZP_06061890.1| GTP-binding protein Era [Acinetobacter johnsonii SH046] gi|262316239|gb|EEY97277.1| GTP-binding protein Era [Acinetobacter johnsonii SH046] Length = 342 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIVGIDS------RAKSQAVFVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V ++D Q D+ V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAASSALRDVNLVLFVLDA-DKWTQNDELVLEKLKNAEM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID L L + + + N+ E++P S+++ ++ LR I + + Sbjct: 149 PVILVINKIDTLENKNHALPLIQERAKLMNFA----EIVPVSALRGANLDHLRDTIEKYL 204 >gi|254449216|ref|ZP_05062665.1| GTP-binding protein EngA [gamma proteobacterium HTCC5015] gi|198261193|gb|EDY85489.1| GTP-binding protein EngA [gamma proteobacterium HTCC5015] Length = 472 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 18/210 (8%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNA 61 + T+F F +P+ IA GR NVGKS+LIN ++ + +A Sbjct: 154 LIETLFETLPDHFDEEIPDKEH---DDSVRIAVVGRPNVGKSTLINRILGETRV-LAYDA 209 Query: 62 PGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL 121 PG T+ F ++ L L+D G + V+ + +V+ L + Sbjct: 210 PGTTRDSIF------VPFESELGRYTLIDTAGVRKRGKIHETVEKFS--VVKALQAIAEA 261 Query: 122 RCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY 181 V +ID R GV + D + + + + V+ K D LSP E + Sbjct: 262 HVVLQVIDARRGVAEQDLTLLREVLHQGSALVFVINKWDGLSPEERDFIKEDLSRRLN-- 319 Query: 182 PTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + PE S++ G+ ILE +N Sbjct: 320 FISFPEFHFISALHGTGV----GHILEAVN 345 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 21/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + N K A +V Sbjct: 3 PVIAIVGRPNVGKSTLFNCLTRTRD-ALVADMPGLTRDRKY------GNGKLGDRAYVVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + + + ++D R G+ ID+++ + KK Sbjct: 56 DTGGL-----STDQDEMDNLMASQAQQAMDEADILLFMVDSREGINPIDENIAREIRKKG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K+D P + Y E + ++ +G+ L + + ET Sbjct: 111 KPVFLVANKMDGCDPDVIRA---------DFYQLGLGEPLTIAASHNRGVHSLIETLFET 161 Query: 210 I 210 + Sbjct: 162 L 162 >gi|146096974|ref|XP_001467995.1| hypothetical protein [Leishmania infantum JPCM5] gi|134072361|emb|CAM71069.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 775 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 25/200 (12%) Query: 2 VSHTIFTKSAWIFLRGVPEIGLLPKA--GPPEIAFSGRSNVGKSSLINILVNRKNLARTS 59 +S+ +F + L+ V + LP+ PE+ F G+ GKSSLI+ L++ L + Sbjct: 56 LSNEVFGRGN-RHLKNVEMLTALPEGLHSFPEVCFIGKPGCGKSSLISCLLHNHRLGKAG 114 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPK-----KNVDSWGGLIVRY 114 G T+ L FF D A+ LVD PGYG R + + ++ RY Sbjct: 115 ATAGTTRLLQFFNVGD---------ALLLVDTPGYGGWRGREMGQRLAEQANAFSILFRY 165 Query: 115 LSER--STLRCVYLLIDCR----HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQ 168 L+ R S L+ VY L++ + D+++ +FL ++ + + +VLTKID+ A+ Sbjct: 166 LALRNGSNLKRVYWLMESSARTPVSFQPRDEELLTFLSRERIPFSVVLTKIDRHWRHYAE 225 Query: 169 ETLEKTKYLIRNYPTAHPEV 188 + ++T + HP V Sbjct: 226 Q--QRTADRVGKDGFVHPRV 243 >gi|303249765|ref|ZP_07335969.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251953|ref|ZP_07533854.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256448|ref|ZP_07538230.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|302651332|gb|EFL81484.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860645|gb|EFM92657.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865078|gb|EFM96979.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 506 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + + PG T+ + ++ + ++D Sbjct: 219 KIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQYTIID 271 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R G+ D + F+ Sbjct: 272 TAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFILNAGR 329 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D LS + + + V S++ G+ L ++ E Sbjct: 330 SLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSVKEA 386 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAGY------DFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLVPADIGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G I+ + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIDQVLAP 161 Query: 206 ILETIN 211 + E +N Sbjct: 162 LGEQLN 167 >gi|303252646|ref|ZP_07338809.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247405|ref|ZP_07529452.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648614|gb|EFL78807.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856102|gb|EFM88258.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 506 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + + PG T+ + ++ + ++D Sbjct: 219 KIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQYTIID 271 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R G+ D + F+ Sbjct: 272 TAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFILNAGR 329 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D LS + + + V S++ G+ L ++ E Sbjct: 330 SLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSVKEA 386 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAGY------DFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLVPADIGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G IE + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLAP 161 Query: 206 ILETIN 211 + E +N Sbjct: 162 LGEQLN 167 >gi|190149696|ref|YP_001968221.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263004|ref|ZP_07544626.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692380|sp|B3H0R7|DER_ACTP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189914827|gb|ACE61079.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871630|gb|EFN03352.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 506 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + + PG T+ + ++ + ++D Sbjct: 219 KIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQYTIID 271 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R G+ D + F+ Sbjct: 272 TAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFILNAGR 329 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D LS + + + V S++ G+ L ++ E Sbjct: 330 SLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSVKEA 386 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAGY------DFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLVPADIGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G I+ + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIDQVLAP 161 Query: 206 ILETIN 211 + E +N Sbjct: 162 LGEQLN 167 >gi|165975864|ref|YP_001651457.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|238687527|sp|B0BTQ8|DER_ACTPJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|165875965|gb|ABY69013.1| conserved putative GTP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 506 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + + PG T+ + ++ + ++D Sbjct: 219 KIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQYTIID 271 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R G+ D + F+ Sbjct: 272 TAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFILNAGR 329 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D LS + + + V S++ G+ L ++ E Sbjct: 330 SLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSVKEA 386 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAGY------NFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLVPADIGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G I+ + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIDQVLAP 161 Query: 206 ILETIN 211 + E +N Sbjct: 162 LGEQLN 167 >gi|32034718|ref|ZP_00134849.1| COG1160: Predicted GTPases [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207887|ref|YP_001053112.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae L20] gi|307260878|ref|ZP_07542564.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|166224300|sp|A3MZC1|DER_ACTP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|126096679|gb|ABN73507.1| GTP-binding protein EngA [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|306869445|gb|EFN01236.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 506 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + + PG T+ + ++ + ++D Sbjct: 219 KIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQYTIID 271 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R G+ D + F+ Sbjct: 272 TAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFILNAGR 329 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D LS + + + V S++ G+ L ++ E Sbjct: 330 SLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSVKEA 386 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAGY------DFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLVPADIGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G I+ + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIDQVLAP 161 Query: 206 ILETIN 211 + E +N Sbjct: 162 LGEQLN 167 >gi|297565398|ref|YP_003684370.1| ribosome-associated GTPase EngA [Meiothermus silvanus DSM 9946] gi|296849847|gb|ADH62862.1| ribosome-associated GTPase EngA [Meiothermus silvanus DSM 9946] Length = 437 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 22/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKSSL N L+ K A ++ PG T+ L + +++ LVD Sbjct: 3 KVVIVGRPNVGKSSLFNRLLG-KRHAVVADQPGVTRDLK------EATVESERGRFKLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + + L V +D R + D +V FL +K Sbjct: 56 TGGLWSGDVWEQKIK---EKVEAAL---EDADLVLFTVDGRADISPADLEVADFLRRKHS 109 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + +V TK+D E YL + E +PTSS +G++ L I + Sbjct: 110 NVLLVATKVD----DPKHEN-----YLGDLWALGFGEPVPTSSSHARGLDELEDKIWSKL 160 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 14/178 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P +IA GR N GKSSL+N ++ + + S PG T+ Sbjct: 170 PEVVPIKIAIVGRPNAGKSSLLNAILGEERV-IVSEEPGTTRDSI------DVEFDYGGT 222 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G + P+ V+ I R V+L+ID + + + Sbjct: 223 LFQLVDTAGIR--KRPETLVEELA--IARAHKSIEEADIVFLVIDP-ANFGDRELKLANE 277 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + +TK D + + + + + H + SS+ + L Sbjct: 278 ALEAGKPVILTVTKWDLVKKDDQPKVRREISERLAHL--GHLPRVYVSSLTGLNLHKL 333 >gi|255525663|ref|ZP_05392596.1| small GTP-binding protein [Clostridium carboxidivorans P7] gi|296185422|ref|ZP_06853832.1| ribosome-associated GTPase EngA [Clostridium carboxidivorans P7] gi|255510649|gb|EET86956.1| small GTP-binding protein [Clostridium carboxidivorans P7] gi|296050256|gb|EFG89680.1| ribosome-associated GTPase EngA [Clostridium carboxidivorans P7] Length = 438 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 9/179 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IAF G+ NVGKSSLIN L+ + S PG T+ S L+ L+D Sbjct: 178 KIAFVGKPNVGKSSLINKLLGEDRV-IVSEIPGTTRDAI------DSYLETEQGKFTLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ ++ + +I Y + L++D HG+ D+ + + + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTY-TAIERADVCILMLDATHGITDQDEKIIGYAHEMSK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + +++ K D + T K + + ++ + S+ + ++ + + E Sbjct: 289 AIMVIVNKWDLVEKDTNTMNAFKKQIGMNLSFMSYAPYLFISAKTGQRVQKVLDMVKEC 347 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 20/180 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N + K ++ + PG T+ + + + Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKMAG-KRISIVQDTPGVTRDRIY------AEAEWLKYNFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + + T + ++D + G+ D++V L K Sbjct: 55 IIDTGGI----EPENSDIIISQMRRQATMAVETANVIVFIVDGKQGLTDADKEVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID L Y E I S+ + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDSLKDED---------NAYEFYNLGIGEPIAISASQALGLGDMLDKVV 161 >gi|78223517|ref|YP_385264.1| GTP-binding protein EngA [Geobacter metallireducens GS-15] gi|123571482|sp|Q39T85|DER_GEOMG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78194772|gb|ABB32539.1| GTP-binding protein Era, putative [Geobacter metallireducens GS-15] Length = 439 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 64/182 (35%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N LV R+ A + PG T+ N+ F L Sbjct: 2 MPLVAIVGRPNVGKSTLFNRLVGRRK-AIVDDMPGVTRDRNYETVTRFE------APFIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G+ + + + + L+D R G+ D +V L + Sbjct: 55 IDTGGFEPVSEDR----LLQQMREQSQLAMEEADVIIFLMDGRAGLTPSDVEVVEMLRRV 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V+ K+D E Y + S+ +G+ L + ++ Sbjct: 111 KKPVFFVVNKVD----GEKIEN-----EAADFYTLGIGTLHTISAEHNRGVNDLMEEVVA 161 Query: 209 TI 210 + Sbjct: 162 AL 163 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 76/192 (39%), Gaps = 17/192 (8%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 L IA GR NVGKSSL+N L+ + + + PG T+ + N Sbjct: 170 LDDEDITRIAVVGRPNVGKSSLVNRLLGFERVV-ANPTPGTTRDSV------DTLFACNK 222 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G + ++ + +V L V ++I+ GV + D+ + Sbjct: 223 KRYLLIDTAGIRRKGKTTQKLEKYS--VVDSLRSIERADVVLIIINAEEGVTEQDERIAG 280 Query: 144 FLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-- 199 + + + V+ K D L+ +T + +++ K + + ++ S+ + I Sbjct: 281 YAFEAGKACIFVVNKWDTLAKDNSTLGKFVDQIKTEFKYL--SFAPIVFVSAKSGQRINR 338 Query: 200 --EVLRKAILET 209 E + + + + Sbjct: 339 VMEEVERVMAQY 350 >gi|152978550|ref|YP_001344179.1| GTP-binding protein EngA [Actinobacillus succinogenes 130Z] gi|150840273|gb|ABR74244.1| small GTP-binding protein [Actinobacillus succinogenes 130Z] Length = 503 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 68/185 (36%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 210 PDHRNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSIYI------PMERDGQ 262 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 ++D G V+ + +++ L V L ID R G+ D + F Sbjct: 263 HYTIIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGF 320 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S IV+ K D L + + V S++ G+ L + Sbjct: 321 ILNAGRSLVIVVNKWDGLDQDIKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFE 378 Query: 205 AILET 209 ++ E Sbjct: 379 SVREA 383 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 72/179 (40%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQAN------ISGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLTPADIGIANYLRQRQ 111 Query: 150 -VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y E+ ++ + +G+ L +A+L Sbjct: 112 SKTTIVVANKTDGIDADS---------HCAEFYQLGLGEITQIAAAQGRGVAQLMEAVL 161 >gi|241761000|ref|ZP_04759089.1| small GTP-binding protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374619|gb|EER64080.1| small GTP-binding protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 454 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N LV K LA + PG T+ + + + Sbjct: 1 MPSVAIIGRPNVGKSTLFNRLVG-KRLALVDDRPGVTRDRR------EGDAELIGMPFRV 53 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G+ + G + V+ + +ID R G+ +D+++ +L Sbjct: 54 IDTAGF----EDEDPASLPGRMRVQTEAAVKECDVALFVIDARQGITPLDEEIARWLRAL 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ K E L+ Y E +P S+ +G+ L +A+ Sbjct: 110 GKPIIVLANKC---------EGKGGESGLLEAYSLGFGEPLPFSAEHGEGLVGLFQAL 158 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 13/184 (7%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P ++A GR N GKS+LIN L+ + T G T+ + + Sbjct: 188 SPLQLAIVGRPNAGKSTLINRLIGVDRM-ITGPEAGITRDSIAI------DWSWQGRPVR 240 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G ++ + V LL+D G++ D + + + Sbjct: 241 LIDTAGLRKKARVVDKMERLSVM--DTFRTIDYAEVVVLLLDGTQGLEGQDLRIADRVLE 298 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRKA 205 + S I + K D + L+ + + + +I S++ +G++ L KA Sbjct: 299 EGRSLIIAINKWDMV--ENPSAFLQAIREGLNDGLAQVKGVPLITISALTGRGVDPLLKA 356 Query: 206 ILET 209 ET Sbjct: 357 AFET 360 >gi|298675494|ref|YP_003727244.1| GTP-binding protein HSR1-like protein [Methanohalobium evestigatum Z-7303] gi|298288482|gb|ADI74448.1| GTP-binding protein HSR1-related protein [Methanohalobium evestigatum Z-7303] Length = 209 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 29/197 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F+GRSNVGKSS I L +K + PG T D M + D Sbjct: 15 EIVFAGRSNVGKSSFIRELTGKK--VKVGKRPGVTLKPYNICYSD----------MLVTD 62 Query: 91 MPGYGYARAPKK-NVDSWGGLIVRYLSER-STLRCVYLLID------------CRHGVKQ 136 MPG+G+ K D IVRY ++ L+ID R + Sbjct: 63 MPGFGFMSGVKDRKKDIVHDKIVRYFENNAKRIKVAVLIIDGPAFIDIADRWNARDEI-P 121 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSV 194 ID ++F FL++ + + + KIDK+ ++ + + P ++I SV Sbjct: 122 IDIEMFEFLNELNIDTIVAVNKIDKIKSKDYEQIMNGIVERLGMSPPWKQWIDIIAPVSV 181 Query: 195 KRKGIEVLRKAILETIN 211 K+ I+ R+ I ++ Sbjct: 182 KKGDIQSARELIKNRLH 198 >gi|114046809|ref|YP_737359.1| GTP-binding protein EngA [Shewanella sp. MR-7] gi|123131595|sp|Q0HX53|DER_SHESR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|113888251|gb|ABI42302.1| small GTP-binding protein [Shewanella sp. MR-7] Length = 488 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 195 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRDSIYI------PMERDGRE 247 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + ++ + +++ L V L+ID R GV + D + F Sbjct: 248 YVIIDTAGVRRRSKVHEVIEKFS--VIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFA 305 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 306 LNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLFES 363 Query: 206 ILETIN 211 I E + Sbjct: 364 IEEAYD 369 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAFLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V + D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--KMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V KID + Sbjct: 110 QKTTFVVANKIDGID 124 >gi|332288185|ref|YP_004419037.1| GTP-binding protein EngA [Gallibacterium anatis UMN179] gi|330431081|gb|AEC16140.1| GTP-binding protein EngA [Gallibacterium anatis UMN179] Length = 507 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 215 EQKPIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDGQQ 267 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L ID R G+ D + F+ Sbjct: 268 YTIIDTAGVRKRGKVTLTVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFI 325 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + IV+ K D LS + + V S++ G+ L ++ Sbjct: 326 LNAGRALVIVVNKWDGLSQEIKDNIKSELDRRLD--FIDFARVHFISALHGSGVGNLFES 383 Query: 206 ILET 209 + E Sbjct: 384 VNEA 387 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A +N PG T+ + + N ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVANFPGLTRDRKYGQGQ------LNGTEFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI-----DGSEQGIEEKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIAQYLRRRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V KID + + ++ Y E+ P ++ + +G+ L + +L Sbjct: 111 KTTVVVANKIDGIDADS---------HIGEFYQLGLGEITPIAASQGRGVTQLIQDVL 159 >gi|261856783|ref|YP_003264066.1| ribosome-associated GTPase EngA [Halothiobacillus neapolitanus c2] gi|261837252|gb|ACX97019.1| ribosome-associated GTPase EngA [Halothiobacillus neapolitanus c2] Length = 567 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A GR NVGKS+L N L+ + + PG T+ + + N A Sbjct: 176 DEKTIRVALIGRPNVGKSTLTNRLLGEDRV-LAFDQPGTTRDSIYI------PFEQNGKA 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + IV+ L V L+ D G+ + DQ + F+ Sbjct: 229 YTLIDTAGVRRRARVNEMIEKFS--IVKTLQAIEAANVVILVCDAHEGISEQDQHLLGFI 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I + K D L+ E + +R + E+ S++ G+ L ++ Sbjct: 287 HDRGRALVIAINKWDNLTDYARAEVKRQID--LRLDFINYAEMHFISALHGTGVGHLFES 344 Query: 206 ILET 209 + + Sbjct: 345 VDKA 348 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + R A ++ G T+ + + ++ ++ Sbjct: 3 PVIALVGRPNVGKSTLFNQMT-RSRAALVADYAGLTRDRQY------GSAEHEGRDFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R + + + CV ++D R G+ DQ++ L + + Sbjct: 56 DTGGLTGERGGIEALMQDQAW-----AAIEEADCVVFMVDARAGLTVADQEIAEKLRRSS 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 Q+V+ K+D + + Q + E + T++ +GI L A+L Sbjct: 111 KPIQLVVNKVDGVDESLVQAEFARL---------GLGEPVFTTASHGRGISTLWDAVL 159 >gi|24374819|ref|NP_718862.1| GTP-binding protein EngA [Shewanella oneidensis MR-1] gi|37999695|sp|Q8EC36|DER_SHEON RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|24349505|gb|AAN56306.1|AE015769_2 GTP-binding protein EngA [Shewanella oneidensis MR-1] Length = 487 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 195 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRDSIYI------PMERDGRE 247 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + ++ + +++ L V L+ID R GV + D + F Sbjct: 248 YVIIDTAGVRRRSKVHEVIEKFS--VIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFA 305 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 306 LNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLFES 363 Query: 206 ILETIN 211 I E + Sbjct: 364 IEEAYD 369 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAFLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V + D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--KMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V KID + Sbjct: 110 QKTTFVVANKIDGID 124 >gi|294651021|ref|ZP_06728361.1| GTP-binding protein era family protein [Acinetobacter haemolyticus ATCC 19194] gi|292823122|gb|EFF81985.1| GTP-binding protein era family protein [Acinetobacter haemolyticus ATCC 19194] Length = 341 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 41 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIVGIDS------REKSQAVFVDT 93 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V ++D + Q D+ V L + Sbjct: 94 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVVDAQ-KWTQNDELVLEKLKNADM 147 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D L + + + N+ E++P S+++ +E LR I + + Sbjct: 148 PVILVINKLDTFENKNEALPLIQERAKLMNFA----EIVPVSALRGANLEHLRDTIEKYL 203 Query: 211 NY 212 Y Sbjct: 204 PY 205 >gi|28897386|ref|NP_796991.1| GTP-binding protein EngA [Vibrio parahaemolyticus RIMD 2210633] gi|308094331|ref|ZP_05888700.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AN-5034] gi|308095608|ref|ZP_05907112.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus Peru-466] gi|308125630|ref|ZP_05776379.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus K5030] gi|308126072|ref|ZP_05907679.2| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AQ4037] gi|31340057|sp|Q87S12|DER_VIBPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|28805598|dbj|BAC58875.1| GTP-binding protein [Vibrio parahaemolyticus RIMD 2210633] gi|308086906|gb|EFO36601.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus Peru-466] gi|308092889|gb|EFO42584.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AN-5034] gi|308106660|gb|EFO44200.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus AQ4037] gi|308113011|gb|EFO50551.1| ribosome-associated GTPase EngA [Vibrio parahaemolyticus K5030] Length = 498 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 206 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 258 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + V+ + +V+ L V L+ID R + D + F Sbjct: 259 YVIIDTAGVRRRGRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 316 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 317 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 374 Query: 206 ILET 209 I E Sbjct: 375 IQEA 378 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 20/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQARLDEEHE-----FIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + + L K Sbjct: 56 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFLVDGRAGLTPADEAIAAHLRKI 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + ++ ++ +G+ L + Sbjct: 111 EKPAMLVVNKIDGIDADAACA---------DFWQLGVDDMYQIAAAHGRGVTALLE 157 >gi|156975791|ref|YP_001446698.1| GTP-binding protein Era [Vibrio harveyi ATCC BAA-1116] gi|156527385|gb|ABU72471.1| hypothetical protein VIBHAR_03535 [Vibrio harveyi ATCC BAA-1116] Length = 320 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V + VD Sbjct: 29 IAIVGRPNVGKSTLLNKILGQK-ISITSRKPQTTRHRIMGVDTE------GDYQAIYVDT 81 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V+ L+D H D+ V + L K Sbjct: 82 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTNDDEMVLTKLQKSNF 135 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + E + + + +V+P S+ K IEVLRK + + + Sbjct: 136 PVVLCVNKVDNV--QDRNEVMLHMMDMSKKMD--FVDVVPISAKHGKNIEVLRKHVRDHL 191 >gi|323466383|gb|ADX70070.1| GTP-binding protein era-like protein [Lactobacillus helveticus H10] Length = 301 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SDKMQVVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + LS + + V +++ + + DQ + + L + V Sbjct: 64 PGI---FKPHSKLDDYMD--KASLSSLNDVDLVLFMVES-EEIGKGDQYIANLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ P ++ L E++P S+ + GIE L I + + Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDLLNTINKYL 171 >gi|168180594|ref|ZP_02615258.1| GTP-binding protein [Clostridium botulinum NCTC 2916] gi|226949875|ref|YP_002804966.1| GTP-binding protein EngA [Clostridium botulinum A2 str. Kyoto] gi|254783146|sp|C1FSU2|DER_CLOBJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|182668460|gb|EDT80439.1| GTP-binding protein [Clostridium botulinum NCTC 2916] gi|226841615|gb|ACO84281.1| ribosome-associated GTPase EngA [Clostridium botulinum A2 str. Kyoto] gi|322806789|emb|CBZ04358.1| GTP-binding protein EngA [Clostridium botulinum H04402 065] Length = 439 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 15/169 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V +F L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERL-IVSDIPGTTRDSIDSYVDTEFGE-------FTLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ ++ + +I Y + L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTY-ASIERADVCILMIDATEGISEQDQKIIGYAHDINK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRK 197 + +++ K D + +T++K K ++ + P + + S+ + Sbjct: 289 AILVIVNKWDLVEKDD--KTMDKFKKELKVNLSFMPYAKYLFISAKTGQ 335 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVQDTPGVTRDRI-YAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G PK + + + L+D + G+ D++V L K Sbjct: 55 MIDTGGI----EPKSEDIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KIDKL Y + + SS + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDKLKDEN---------NAYEFYNLGIGDPVTISSSQALGLGDMLDRVV 161 Query: 208 ET 209 E Sbjct: 162 EY 163 >gi|56551349|ref|YP_162188.1| GTP-binding protein EngA [Zymomonas mobilis subsp. mobilis ZM4] gi|56542923|gb|AAV89077.1| small GTP-binding protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 454 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N LV K LA + PG T+ + + + Sbjct: 1 MPSVAIIGRPNVGKSTLFNRLVG-KRLALVDDRPGVTRDRR------EGDAELIGMPFRV 53 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G+ + G + V+ + +ID R G+ +D+++ +L Sbjct: 54 IDTAGF----EDEDPASLPGRMRVQTEAAVKECDVALFVIDARQGITPLDEEIARWLRAL 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ K E L+ Y E +P S+ +G+ L +A+ Sbjct: 110 GKPIIVLANKC---------EGKGGESGLLEAYSLGFGEPLPFSAEHGEGLVGLFQAL 158 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 13/184 (7%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P ++A GR N GKS+LIN L+ + T G T+ + + Sbjct: 188 SPLQLAIVGRPNAGKSTLINRLIGVDRM-ITGPEAGITRDSIAI------DWSWQGRPVR 240 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G ++ + V LL+D G++ D + + + Sbjct: 241 LIDTAGLRKKARVVDKMERLSVM--DTFRTIDYAEVVVLLLDGTQGLEGQDLRIADRVLE 298 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRKA 205 + S I + K D + L+ + + + +I S++ +G++ L KA Sbjct: 299 EGRSLIIAINKWDMV--ENPSAFLQAIREGLNDGLAQVKGVPLITISALTGRGVDPLLKA 356 Query: 206 ILET 209 ET Sbjct: 357 AFET 360 >gi|54297453|ref|YP_123822.1| GTP-binding protein EngA [Legionella pneumophila str. Paris] gi|148359075|ref|YP_001250282.1| GTP-binding protein EngA [Legionella pneumophila str. Corby] gi|296107123|ref|YP_003618823.1| GTP-binding protein EngA [Legionella pneumophila 2300/99 Alcoy] gi|81822576|sp|Q5X522|DER_LEGPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225822|sp|A5IC36|DER_LEGPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|53751238|emb|CAH12649.1| hypothetical protein lpp1498 [Legionella pneumophila str. Paris] gi|148280848|gb|ABQ54936.1| GTP-binding protein EngA [Legionella pneumophila str. Corby] gi|295649024|gb|ADG24871.1| GTP-binding protein EngA [Legionella pneumophila 2300/99 Alcoy] Length = 462 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 15/186 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +IAF+GR NVGKS+LIN ++ + + + PG T+ Sbjct: 171 DDKAIKIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRDSISI------PFTREDKQ 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +++ L LL+D G+ D ++ F+ Sbjct: 224 YVLIDTAGVRRKSRIDEKIEKFS--VIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFI 281 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVKRKGIEVLR 203 + + I + K D L ++ EK K + R + ++ S++ G+ L Sbjct: 282 IESGKALVIAVNKWDGLE----EDHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLF 337 Query: 204 KAILET 209 K I E Sbjct: 338 KDINEA 343 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 21/180 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N + ++ A ++ PG T+ + + ++ + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRITKTQD-ALVADFPGLTRDRQY------GHAQHENKSFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G G + S + + + L+D R G+ IDQ + L K Sbjct: 55 VDTGGIGVDDIEVDTLMSRQSQV-----ALNEANVILFLVDGRSGLTGIDQQIAQALRKL 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K D ++ A + +V S+ GI L + ILE Sbjct: 110 NKKVHLVVNKTDGMNEDIACADFQSL---------GITDVHAISASHGGGISSLLEEILE 160 >gi|84390105|ref|ZP_00991367.1| GTP-binding protein Era [Vibrio splendidus 12B01] gi|86146358|ref|ZP_01064682.1| GTP-binding protein Era [Vibrio sp. MED222] gi|218710568|ref|YP_002418189.1| GTP-binding protein Era [Vibrio splendidus LGP32] gi|84376759|gb|EAP93634.1| GTP-binding protein Era [Vibrio splendidus 12B01] gi|85835837|gb|EAQ53971.1| GTP-binding protein Era [Vibrio sp. MED222] gi|218323587|emb|CAV19827.1| GTP-binding protein era homolog [Vibrio splendidus LGP32] Length = 323 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 26/193 (13%) Query: 26 KAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 K G PE IA GR NVGKS+L+N ++ +K ++ TS P T+H V + Sbjct: 20 KTGLPENQHCGFIAIVGRPNVGKSTLLNHILGQK-ISITSRKPQTTRHRIMGVETE---- 74 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQID 138 VD PG + + L+ R + S + V+ L+D H D Sbjct: 75 --GDYQAIYVDTPGLHI-----EEKRAINRLMNRAANSSLSDVNLVFFLVDGTH-WTDDD 126 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + V + L K + + K+D + T + + + + +V+P S+ + K Sbjct: 127 EMVLNKLRKTDFPVVLCINKVDNVQDRTDVMQHMMEVSKKM-----DFLDVVPISAKQGK 181 Query: 198 GIEVLRKAILETI 210 I+VLRK + ++ Sbjct: 182 NIDVLRKHVRNSL 194 >gi|110669035|ref|YP_658846.1| GTP-binding protein [Haloquadratum walsbyi DSM 16790] gi|119369203|sp|Q18FK7|ENGB_HALWD RecName: Full=Probable GTP-binding protein EngB gi|109626782|emb|CAJ53250.1| probable GTP-binding protein [Haloquadratum walsbyi DSM 16790] Length = 206 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 28/192 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ GRSNVGKS+L+ L T PG T+ N + D+++ + D Sbjct: 10 EVVLLGRSNVGKSTLMRELTGHTG-FTTGRKPGVTRSPNHY---DWAS-----ESFMFTD 60 Query: 91 MPGYGYAR-APKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDC--------RH-GVKQI-- 137 +PG+G+ + IVRY+ ++ L++D RH G +I Sbjct: 61 LPGFGFMSGVESSQREQIKTDIVRYIESNAESILAAVLVVDGKSAVEIIDRHSGPDEIPH 120 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSV 194 D ++FSFL + + + + KIDK+ L+ + YP + P S+ Sbjct: 121 DIELFSFLWELDLPTVVAVNKIDKV--ENKDNQLDDLCDRLGLYPPWQQWQDTIAPISAK 178 Query: 195 KRKGIEVLRKAI 206 + IE L +A+ Sbjct: 179 RGS-IEPLEEAL 189 >gi|328472592|gb|EGF43455.1| GTP-binding protein Der [Vibrio parahaemolyticus 10329] Length = 498 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 206 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 258 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + V+ + +V+ L V L+ID R + D + F Sbjct: 259 YVIIDTAGVRRRGRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 316 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 317 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 374 Query: 206 ILET 209 I E Sbjct: 375 IQEA 378 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 20/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQARLDEEHE-----FIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + + L K Sbjct: 56 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFLVDGRAGLTSADEAIAAHLRKI 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + ++ ++ +G+ L + Sbjct: 111 EKPAMLVVNKIDGIDADAACA---------DFWQLGVDDMYQIAAAHGRGVTALLE 157 >gi|255321133|ref|ZP_05362299.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SK82] gi|262380178|ref|ZP_06073333.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SH164] gi|255301687|gb|EET80938.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SK82] gi|262298372|gb|EEY86286.1| ribosome-associated GTPase EngA [Acinetobacter radioresistens SH164] Length = 469 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 74/191 (38%), Gaps = 20/191 (10%) Query: 21 IGLLPKAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + +P+ PE +A GR NVGKS+L+N L+ + + + PG T+ + Sbjct: 159 LADVPEDENPEEHDKATGLRLAIIGRPNVGKSTLVNRLLGEERVVAY-DEPGTTRDSVYI 217 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + + L+D G + ++ + +V+ L V +++D R Sbjct: 218 ------PFERDGRQYTLIDTAGVRRKGKVDEMIEKFS--VVKTLQAMKDAHVVVVVLDAR 269 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 GV + D + + + + I + K D +S ++ P A + Sbjct: 270 EGVVEQDLHLIGYALEAGRAMVIAINKWDNMSEYDRKQCKLDVDRRFDFIPWA--RIHLI 327 Query: 192 SSVKRKGIEVL 202 S++ G+ L Sbjct: 328 SALHGTGVGDL 338 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 70/178 (39%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + + A ++ G T+ + + + +V Sbjct: 3 PVIALIGRPNVGKSTLFNQIT-KSRDALVADFAGLTRDRKY------GDAVYQNKSFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G ++ +DS+ + + + + ++D R G+ D+ + L Sbjct: 56 DTGGIG---ESEQGIDSY--MAEQSKTAIHEADLIIFVVDARAGLLASDEQIARELRTLG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K+D + A ++ Y E + ++ +G+ + + +L Sbjct: 111 KKVFLVANKVDGVHAEAA---------VVEFYKLGLGEPMHVAASHGRGVAQMLEEVL 159 >gi|226951499|ref|ZP_03821963.1| GTP-binding protein, 16S rRNA-binding, ribosome-associated GTPase [Acinetobacter sp. ATCC 27244] gi|226837792|gb|EEH70175.1| GTP-binding protein, 16S rRNA-binding, ribosome-associated GTPase [Acinetobacter sp. ATCC 27244] Length = 341 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 41 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIVGIDS------REKSQAVFVDT 93 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V ++D + Q D+ V L + Sbjct: 94 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVVDAQ-KWTQNDELVLEKLKNADM 147 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D L + + + N+ E++P S+++ +E LR I + + Sbjct: 148 PVILVINKLDTFENKNEALPLIQERAKLMNFA----EIVPVSALRGANLEHLRDTIEKYL 203 Query: 211 NY 212 Y Sbjct: 204 PY 205 >gi|260753034|ref|YP_003225927.1| GTP-binding protein EngA [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552397|gb|ACV75343.1| small GTP-binding protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 454 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N LV K LA + PG T+ + + + Sbjct: 1 MPSVAIIGRPNVGKSTLFNRLVG-KRLALVDDRPGVTRDRR------EGDAELIGMPFRV 53 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G+ + G + V+ + +ID R G+ +D+++ +L Sbjct: 54 IDTAGF----EDEDPASLPGRMRVQTEAAVKECDVALFVIDARQGITPLDEEIARWLRAL 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ K E L+ Y E +P S+ +G+ L +A+ Sbjct: 110 GKPIIVLANKC---------EGKGGESGLLEAYSLGFGEPLPFSAEHGEGLVGLFQAL 158 Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 13/184 (7%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P ++A GR N GKS+LIN L+ + T G T+ + + Sbjct: 188 SPLQLAIVGRPNAGKSTLINRLIGVDRM-ITGPEAGITRDSIAI------DWSWQGRPVR 240 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G ++ + V LL+D G++ D + + + Sbjct: 241 LIDTAGLRKKARVVDKMERLSVM--DTFRTIDYAEVVVLLLDGTQGLEGQDLRIADRVLE 298 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRKA 205 + S I + K D + L+ + + + +I S++ +G++ L KA Sbjct: 299 EGRSLIIAINKWDMV--ENPSAFLQAIREGLNDGLAQVKGVPLITISALTGRGVDPLLKA 356 Query: 206 ILET 209 ET Sbjct: 357 AFET 360 >gi|307253850|ref|ZP_07535703.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863210|gb|EFM95151.1| GTP-binding protein engB [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] Length = 116 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 103 NVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 W + YL +R LR V +L+D RH +K +DQ + + + ++LTK DKL Sbjct: 1 MKLQWQKALGEYLQKRECLRGVVILMDIRHPLKDLDQQMIEWAVSAQLPVLLLLTKADKL 60 Query: 163 SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 S + +T++ + I + +V S++ + GI+ L Sbjct: 61 SQSARSKTVKMVREAILPFQ-GDIQVEAYSALNKVGIDKL 99 >gi|257063685|ref|YP_003143357.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Slackia heliotrinireducens DSM 20476] gi|256791338|gb|ACV22008.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Slackia heliotrinireducens DSM 20476] Length = 438 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 15/201 (7%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 LR +PE P +A GR N GKSSL N L+ R + S+ G T+ Sbjct: 164 LRELPEREDEPAEEGINVAIIGRPNAGKSSLTNRLIGRDR-SIVSDVAGTTRDAI----- 217 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++++ +VD G ++V+ + VR + L++D G+ Sbjct: 218 -DTRVEHDGKVYTIVDTAGLRRKSQIDEDVEYYSY--VRAMRAIDRADVAILVMDATLGL 274 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTS 192 DQ V + +++ + I+L K D + L+ + + R + VI S Sbjct: 275 TDQDQRVAGYANERGCALIILLNKRDVVESGD---VLDGLREDVGDRMTFVNYAPVISIS 331 Query: 193 SVKRKGIEVLRKAILE-TINY 212 ++ KG+ + AI E NY Sbjct: 332 ALTGKGVLRIWDAIDEVYANY 352 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 20/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+ +N + + + A G T+ ++ Sbjct: 2 SLPIVAVVGRPNVGKSTFVNRIAHADD-AIVHEMRGVTRDRSYHNADWRGVH------FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G + + + + ++D + G+ D++V L K Sbjct: 55 LIDTGGIEMG----DDDAFQSSIRDQAFMAADEADVILFMVDGKTGITADDEEVARVLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +++ K+D +P+ +E E Y + SS G L ++ Sbjct: 111 VDTPVFLLVNKMD--NPSKMEENWE-------FYSLGLGDPRSISSTHGHGTGDLLDEVV 161 Query: 208 ETI 210 + Sbjct: 162 AIL 164 >gi|330446667|ref|ZP_08310319.1| small GTP-binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490858|dbj|GAA04816.1| small GTP-binding domain protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 500 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 208 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQE 260 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +++ L V L+ID R + D + F Sbjct: 261 YVLIDTAGIRRRKNMHQAVEKFS--VIQTLKAVEDANVVLLVIDARENISDQDLSLLGFA 318 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + + + + S++ G+ L ++ Sbjct: 319 LNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLG--FVDFARIHFISALHGTGVGHLYES 376 Query: 206 ILET 209 ++E Sbjct: 377 VIEA 380 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAELEEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 +V+ K+D + Sbjct: 110 DKPTFLVVNKVDGID 124 >gi|167623303|ref|YP_001673597.1| GTP-binding protein EngA [Shewanella halifaxensis HAW-EB4] gi|189037161|sp|B0TLI8|DER_SHEHH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|167353325|gb|ABZ75938.1| small GTP-binding protein [Shewanella halifaxensis HAW-EB4] Length = 490 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 196 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRDSIYI------PMERQGRE 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +++ L V L+ID R G+ + D + F+ Sbjct: 249 YVLIDTAGVRRRSKVHETVEKFS--VIKTLKAVEDSNVVLLVIDAREGIAEQDLGLLGFV 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + KT+ R + S++ G+ L ++ Sbjct: 307 LNAGRALVIAVNKWDGIDQNVKDRV--KTELDRRLGFIDFARIHFISALHGTGVGHLFES 364 Query: 206 ILETIN 211 I E + Sbjct: 365 IEEAYD 370 Score = 97.9 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAHLAGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V L D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--RMAEQSLAAIEEADVVLFLTDARAGLTAADLAIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 EKTTFVVANKVDGID 124 >gi|90579361|ref|ZP_01235171.1| GTP-binding protein EngA [Vibrio angustum S14] gi|90440194|gb|EAS65375.1| GTP-binding protein EngA [Vibrio angustum S14] Length = 500 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 208 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQE 260 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +++ L V L+ID R + D + F Sbjct: 261 YVLIDTAGIRRRKNMHQAVEKFS--VIQTLKAVEDANVVLLVIDARENISDQDLSLLGFA 318 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + + + + S++ G+ L ++ Sbjct: 319 LNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLG--FVDFARIHFISALHGTGVGHLYES 376 Query: 206 ILET 209 ++E Sbjct: 377 VIEA 380 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAELEEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 +V+ K+D + Sbjct: 110 EKPTFLVVNKVDGID 124 >gi|52841771|ref|YP_095570.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81823403|sp|Q5ZV99|DER_LEGPH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|52628882|gb|AAU27623.1| GTP-binding protein EngA [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 462 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 15/186 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +IAF+GR NVGKS+LIN ++ + + + PG T+ Sbjct: 171 DDKAIKIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRDSISI------PFTREDKQ 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +++ L LL+D G+ D ++ F+ Sbjct: 224 YVLIDTAGVRRKSRIDEKIEKFS--VIKTLQAIKEAHVCLLLLDANEGITDQDMNLLGFI 281 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVKRKGIEVLR 203 + + I + K D L ++ EK K + R + ++ S++ G+ L Sbjct: 282 IESGKALVIAVNKWDGLE----EDHKEKIKSELSRRLHFANFAKIRFISALHGSGVGGLF 337 Query: 204 KAILET 209 K I E Sbjct: 338 KDINEA 343 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 21/180 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N + ++ A ++ PG T+ + + ++ + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRITKTQD-ALVADFPGLTRDRQY------GHAQHENKSFII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G G + S + + + L+D R G+ IDQ + L K Sbjct: 55 VDTGGIGVDDIEVDTLMSRQSQV-----ALNEANVILFLVDGRSGLTGIDQQIAQALRKF 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K D ++ A + ++ S+ GI L + ILE Sbjct: 110 NKKVHLVVNKTDGMNEDIACADFQSL---------GITDIHAISASHGGGISSLLEEILE 160 >gi|153838555|ref|ZP_01991222.1| GTP-binding protein EngA [Vibrio parahaemolyticus AQ3810] gi|149748070|gb|EDM58929.1| GTP-binding protein EngA [Vibrio parahaemolyticus AQ3810] Length = 498 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 206 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 258 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + V+ + +V+ L V L+ID R + D + F Sbjct: 259 YVIIDTAGVRRRGRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 316 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 317 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 374 Query: 206 ILET 209 I E Sbjct: 375 IQEA 378 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 70/176 (39%), Gaps = 20/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQARLDEEHE-----FIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + + L K Sbjct: 56 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFLVDGRAGLTPADEAIAAHLRKI 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + ++ ++ +G+ L + Sbjct: 111 EKPAMLVVNKIDGIDADAACA---------DFWQLGVDDMYQIAAAHGRGVTALLE 157 >gi|260776629|ref|ZP_05885524.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450] gi|260607852|gb|EEX34117.1| GTP-binding protein EngA [Vibrio coralliilyticus ATCC BAA-450] Length = 495 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 203 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 255 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L+ID R + D + F Sbjct: 256 YVLIDTAGVRRRKRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 313 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + ++ + + S++ G+ L ++ Sbjct: 314 LNAGRSIVIAVNKWDGLDMDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 371 Query: 206 ILET 209 + E Sbjct: 372 VQEA 375 Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D + + L K Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + + ++ +G+ L I Sbjct: 110 EKPSMLVVNKVDGIDADAASA---------DFWQLGVESMYQIAAAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|307249625|ref|ZP_07531611.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858323|gb|EFM90393.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 506 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + + PG T+ + ++ + ++D Sbjct: 219 KIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQYTIID 271 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R G+ D + F+ Sbjct: 272 TAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDARKGISDQDLSLLGFILNAGR 329 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D LS + + + V S++ G+ L ++ E Sbjct: 330 SLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSVKEA 386 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAG------HDFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLVPADIGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D ++ + + Y EV ++ + +G IE + Sbjct: 111 KTTVVVANKTDGINADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLAP 161 Query: 206 ILETIN 211 + E +N Sbjct: 162 LGEQLN 167 >gi|254499341|ref|ZP_05112012.1| GTP-binding protein EngA [Legionella drancourtii LLAP12] gi|254351446|gb|EET10310.1| GTP-binding protein EngA [Legionella drancourtii LLAP12] Length = 468 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IAF+GR NVGKS+LIN ++ + + + PG T+ + Sbjct: 171 EDDAIKIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRDSIAI------PFVRDEQR 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +++ L L+D G+ D ++ F+ Sbjct: 224 YILIDTAGVRRKSRIDEKIEKFS--VIKTLQAIKESNVCLQLLDANEGITDQDMNLLGFI 281 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I + K D L + + K++ R + ++ S++ G+ L K Sbjct: 282 IESGKALVIAVNKWDGLD--EEHKDMIKSELSRRLHFANFAKIRFISALHGSGVGTLFKD 339 Query: 206 ILET 209 I E Sbjct: 340 INEA 343 Score = 88.3 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 12/131 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + ++N + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTKTQD-ALVADFPGLTRDRQY------GQAQHNEKSYIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G G ++ S I + V L+D R G+ +D+ + + L K Sbjct: 55 VDTGGIGVDDIAVDSLMSKQSTI-----ALNEADIVLFLVDGRSGLTGVDEKIANNLRKL 109 Query: 149 AVSYQIVLTKI 159 + +V+ K Sbjct: 110 SKKVHLVVNKT 120 >gi|297517162|ref|ZP_06935548.1| GTP-binding protein EngA [Escherichia coli OP50] Length = 194 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 11/176 (6%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKS+L N ++ + + + PG T+ + ++ + L+D G Sbjct: 1 GRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGREYVLIDTAGVR 53 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 V+ + +++ L V L+ID R G+ D + F+ S IV Sbjct: 54 KRGKITDAVEKFS--VIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIV 111 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + K D LS ++ E + + V S++ G+ L +++ E + Sbjct: 112 VNKWDGLSQEVKEQVRETLDFRLG--FIDFARVHFISALHGSGVGNLFESVREAYD 165 >gi|255533659|ref|YP_003094031.1| small GTP-binding protein [Pedobacter heparinus DSM 2366] gi|255346643|gb|ACU05969.1| small GTP-binding protein [Pedobacter heparinus DSM 2366] Length = 433 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 11/182 (6%) Query: 20 EIGLLPK--AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +P+ P+I GR NVGKSSLIN L+ ++ + G T+ F Sbjct: 162 HFEDVPEEENALPKITIVGRPNVGKSSLINALMGKERN-IVTPIAGTTRDSIHIHYNQFG 220 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 +D G K+N++ + + R + V L+ID G++ Sbjct: 221 ------HEFMFIDTAGLRKKTKVKENIEFYSVM--RTIKALEEADVVILMIDAMEGLESQ 272 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D ++F +K I++ K D + + + + + + P +I S++ ++ Sbjct: 273 DVNIFHLAEKNKKGIVILVNKWDLVEKNSKTVNIFEDQIRQKLQPFTDIPIIFISALNKQ 332 Query: 198 GI 199 I Sbjct: 333 RI 334 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 61/178 (34%), Gaps = 20/178 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N L + A + G T+ ++ V + ++D Sbjct: 5 IAIVGRPNVGKSTLFNRLTESRK-AIVDDFSGVTRDRHYGVAEWTDK------QFTVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 GY +I + ++D G+ +D ++ L + Sbjct: 58 GGYVANSEDVFEAAIREQVI----IAIEEATVLLFMVDVTTGITDLDDEIAQLLRRSKKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 IV+ K+D + Y E+ P SS+ G L +++ Sbjct: 114 VFIVVNKVD---------NTQLQNDAAVFYGFGLGEIHPISSMTGSGTGDLLDEVIKH 162 >gi|294506233|ref|YP_003570291.1| GTPases [Salinibacter ruber M8] gi|294342561|emb|CBH23339.1| putative GTPases [Salinibacter ruber M8] Length = 505 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A + PG T+ + + + + V Sbjct: 76 VAIVGRPNVGKSTLFNRLTGSRQ-AIVEDTPGVTRDRVYGEAEWKGHTIPLVDTGGYVPR 134 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 Y RA ++ + + ++D G+ ++D+++ + L Sbjct: 135 SDDPYERAIREQAEI----------ALEDADVILFVVDVTTGITEMDKEIATVLRPTETP 184 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D E+ Y EV P SS ++G++ + A++E + Sbjct: 185 VMVVANKAD---------NEEREWDASEFYQLGLGEVYPVSSTNKRGVDDMMAALVEEL 234 Score = 97.9 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 20/199 (10%) Query: 18 VPEIGLLP------KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + LP +++ G+ N GKSSL+N + A + PG T+ Sbjct: 228 AALVEELPGTEDEADEDRVQVSLVGKPNAGKSSLVNATLGFDR-AIVTERPGTTRDTVQS 286 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 V + + LVD G V+ + + L++D Sbjct: 287 VVQ------YEGRDLMLVDTAGMQKRSKA-DGVEFYATVRSE--RAIRAGDVCVLVLDAT 337 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVI 189 + + D V S +++ + + K D + T+++ +R Y H ++ Sbjct: 338 EELHKQDLSVLSEVNEHKKGMVVAVNKWDLVPKDD--GTMDQYTKYLRQYLGTLDHVPIV 395 Query: 190 PTSSVKRKGIEVLRKAILE 208 S+V ++ + L LE Sbjct: 396 YVSAVTKQRVYELLDKALE 414 >gi|83815424|ref|YP_444485.1| Era/ThdF family GTP-binding protein [Salinibacter ruber DSM 13855] gi|83756818|gb|ABC44931.1| GTP-binding protein, Era/ThdF family [Salinibacter ruber DSM 13855] Length = 505 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A + PG T+ + + + + V Sbjct: 76 VAIVGRPNVGKSTLFNRLTGSRQ-AIVEDTPGVTRDRVYGEAEWKGHTIPLVDTGGYVPR 134 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 Y RA ++ + + ++D G+ ++D+++ + L Sbjct: 135 SDDPYERAIREQAEI----------ALEDADVILFVVDVTTGITEMDKEIATVLRPTETP 184 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D E+ Y EV P SS ++G++ + A++E + Sbjct: 185 VMVVANKAD---------NEEREWDASEFYQLGLGEVYPVSSTNKRGVDDMMAALVEEL 234 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 20/199 (10%) Query: 18 VPEIGLLP------KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + LP +++ G+ N GKSSL+N + A + PG T+ Sbjct: 228 AALVEELPGTEDEADKDRVQVSLVGKPNAGKSSLVNATLGFDR-AIVTERPGTTRDTVQS 286 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 V + + LVD G V+ + + L++D Sbjct: 287 VVQ------YEGRDLMLVDTAGMQKRSKA-DGVEFYATVRSE--RAIRAGDVCVLVLDAT 337 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVI 189 + + D V S +++ + + K D + T+++ +R Y H ++ Sbjct: 338 EELHKQDLSVLSEVNEHKKGMVVAVNKWDLVPKDD--GTMDQYTKYLRQYLGTLDHVPIV 395 Query: 190 PTSSVKRKGIEVLRKAILE 208 S+V ++ + L LE Sbjct: 396 YVSAVTKQRVYELLDKALE 414 >gi|304403961|ref|ZP_07385623.1| GTP-binding protein Era [Paenibacillus curdlanolyticus YK9] gi|304346939|gb|EFM12771.1| GTP-binding protein Era [Paenibacillus curdlanolyticus YK9] Length = 306 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ V + + +D Sbjct: 17 VAIVGRPNVGKSTLMNHIIGQK-IAIMSDKPQTTRNKIHGVYTK------DDKQIVFLDT 69 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK-KAV 150 PG P+ + ++ ++ ++ + LID G+ D+ + L K Sbjct: 70 PGI---HKPQSKLGNF--MVKSAVNALDEVEAALFLIDVSEGIGGGDRFIIEQLKNVKNT 124 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KIDK+ P + + + K L E+IP S+++ +E L + + + Sbjct: 125 PVFLVMNKIDKVKPEELLKIITQYKDL-----YDFAEIIPISALQGNNVETLLEQLGRYL 179 >gi|254519255|ref|ZP_05131311.1| small GTP-binding protein [Clostridium sp. 7_2_43FAA] gi|226913004|gb|EEH98205.1| small GTP-binding protein [Clostridium sp. 7_2_43FAA] Length = 438 Score = 117 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 71/180 (39%), Gaps = 9/180 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSLIN L+ + L S+ PG T+ S L+ LVD Sbjct: 179 IAMIGKPNVGKSSLINRLLGEERL-IVSDIPGTTRDSI------DSALETEQGKFILVDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + +I Y + L+ID GV + D+ + + + + Sbjct: 232 AGLRRKSKVKEEIERY-SVIRTY-AAIERADVCILMIDATEGVTEQDEKIIGYAHEMNKA 289 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +++ K D + K + + + + + S+ + + + E + Sbjct: 290 IMVIVNKWDLIEKDDKTMQRYKEELQMNLKFLKYAKYLFISAKTGQRTHKVLETAKECYD 349 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 26/185 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ ++ + PG T+ + ++ N ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNKLAGQR-ISIVQDTPGVTRDR-VYAQAEWLNYN-----FTMI 56 Query: 90 DMPGYGYARA---PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G R K+ I T + ++D + G+ D +V + L Sbjct: 57 DTGGIEPEREDIIVKQMRRQANIAIE-------TADVIIFVVDGKEGLTPADHEVANMLR 109 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K +V+ K+D +L++ + Y + + S+ + G+ + + Sbjct: 110 KSKKEVVLVVNKVD---------SLKEEENAWEFYNLGIGDPVTISASQALGLGDMLDRV 160 Query: 207 LETIN 211 +E + Sbjct: 161 VENFD 165 >gi|307245234|ref|ZP_07527325.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254181|ref|ZP_07536026.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258646|ref|ZP_07540381.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853878|gb|EFM86092.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862881|gb|EFM94830.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867303|gb|EFM99156.1| GTP-binding protein engA [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 506 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + ++D Sbjct: 219 KIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDGQQYTIID 271 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R G+ D + F+ Sbjct: 272 TAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFILNAGR 329 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D LS + + + V S++ G+ L ++ E Sbjct: 330 SLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSVKEA 386 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAGY------DFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLVPADIGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G I+ + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIDQVLAP 161 Query: 206 ILETIN 211 + E +N Sbjct: 162 LGEQLN 167 >gi|332534677|ref|ZP_08410508.1| GTP-binding protein EngA [Pseudoalteromonas haloplanktis ANT/505] gi|332035889|gb|EGI72371.1| GTP-binding protein EngA [Pseudoalteromonas haloplanktis ANT/505] Length = 476 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 11/183 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P ++A GR NVGKS+L N ++ + + PG T+ + + N Sbjct: 187 DKPVKLAIIGRPNVGKSTLTNRILGEDRV-IVYDMPGTTRDSIYI------PMTRNDKEY 239 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + V+ + +++ L V L++D R G+ D + F Sbjct: 240 VLIDTAGVRKRKKVSDVVEKFS--VIKTLQAIEDCNVVLLVVDARDGISDQDLSLLGFAL 297 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S I + K D L KT+ R + S++ G+ L +++ Sbjct: 298 NSGRSLVIAVNKWDGLDDYVKDRI--KTELDRRLGFIDFARLHFISALHGTGVGHLFESV 355 Query: 207 LET 209 E Sbjct: 356 DEA 358 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 21/164 (12%) Query: 41 GKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP 100 GKS+L N L ++ A ++ PG T+ + + +VD G Sbjct: 2 GKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQAS------YDGYEFIVVDTGGI---DGS 51 Query: 101 KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 ++ ++ + + L V L+D R G+ DQ + + L K+ +V K D Sbjct: 52 EEGIEI--EMADQSLLAIEEADIVLFLVDARVGMTVADQAIANHLRKQEKKCFVVANKTD 109 Query: 161 KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + Y + E+ ++ +GI +L + Sbjct: 110 GIDADS---------NCAEFYQLSLGEIHHIAAAHGRGITLLLE 144 >gi|166362822|ref|YP_001655095.1| GTP-binding protein EngA [Microcystis aeruginosa NIES-843] gi|189037151|sp|B0JFL6|DER_MICAN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166085195|dbj|BAF99902.1| GTP binding protein [Microcystis aeruginosa NIES-843] Length = 452 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 76/197 (38%), Gaps = 13/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ +P +P+ ++A GR NVGKSSL+N L ++ A S G T+ Sbjct: 162 IKYLPPAAEIPENEEIKVAIIGRPNVGKSSLLNALTGQQR-AIVSPISGTTRDSI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ L+D G + + + I R V +ID GV Sbjct: 216 -DTLIEREGQVYRLIDTAGIRRKKNVDYGAEFFS--INRAFKAIRRSDVVLFVIDVLDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + + ++ + +V+ K D + T R Y E+I S++ Sbjct: 273 TEQDLKLAGRIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFMDWAEMIFVSAM 332 Query: 195 KRKGIEVLRKAILETIN 211 + + ILE ++ Sbjct: 333 TGQRV----TKILELVD 345 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N + + A + PG T+ + + + Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQ-AIVFDQPGITRD------RTYQPAFWCDRDFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + L + ++D + G+ D+++ ++L ++ Sbjct: 56 VDTGGLVF----NDDSEFLPLIREQALIALAEASVAIFVVDGQGGITAGDREIAAWLRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + + Q T + A E P S++ G L A+++ Sbjct: 112 NVPILLAVNKCESVEQGILQAT--------EFWELAIGEPFPISAIHGSGTGELLDAVIK 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|157961137|ref|YP_001501171.1| GTP-binding protein EngA [Shewanella pealeana ATCC 700345] gi|189037162|sp|A8H249|DER_SHEPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157846137|gb|ABV86636.1| small GTP-binding protein [Shewanella pealeana ATCC 700345] Length = 490 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 196 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRDSIYI------PMERQGRE 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +++ L V L+ID R G+ + D + F+ Sbjct: 249 YVLIDTAGVRRRSKVHETVEKFS--VIKTLKAVEDSNVVLLVIDAREGIAEQDLGLLGFV 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + KT+ R + S++ G+ L ++ Sbjct: 307 LNAGRALVIAINKWDGIDQNIKDRV--KTELDRRLGFIDFARIHFISALHGTGVGHLFES 364 Query: 206 ILETIN 211 I E + Sbjct: 365 IEEAYD 370 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAHLAGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V L D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--RMAEQSLAAIEEADVVLFLTDARAGLTAADLAIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 EKTTFVVANKVDGID 124 >gi|39997323|ref|NP_953274.1| GTP-binding protein EngA [Geobacter sulfurreducens PCA] gi|81832003|sp|Q74AX4|DER_GEOSL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|39984214|gb|AAR35601.1| GTP-binding protein Era, putative [Geobacter sulfurreducens PCA] gi|298506260|gb|ADI84983.1| GTPase EngA [Geobacter sulfurreducens KN400] Length = 438 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N LV R+ A + PG T+ N+ F L Sbjct: 3 LPIVAIVGRPNVGKSTLFNRLVGRRK-AIVDDMPGVTRDRNYETVTRFD------VPFIL 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G+ P+ + + + + L+D R G+ D +V L + Sbjct: 56 IDTGGF----EPESSDRLLQQMREQSRLAMEEADVILFLMDGRAGLNPADVEVVEMLRRV 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V+ K+D ETLE Y ++ S+ +G+ L ++ Sbjct: 112 DKPVFFVVNKVD-------GETLEVAAS--EFYSLGVDNLLTISAEHNRGVRDLMDEVVA 162 Query: 209 TI 210 + Sbjct: 163 AL 164 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 80/203 (39%), Gaps = 24/203 (11%) Query: 21 IGLLPK-AGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP+ PE IA GR NVGKSSL+N L+ + + + PG T+ Sbjct: 161 VAALPQRTTSPEERNATKIAVVGRPNVGKSSLVNRLLGYERVV-ANPTPGTTRD----SV 215 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N L+D G + ++ + +V L V ++++ G Sbjct: 216 DTWFTC--NKKRYLLIDTAGIRRKGKTTQKIEKYS--VVDSLRSIERADVVLIVLNAEEG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPT 191 V + D+ + + + + V+ K D + ++ ++K + + A ++ Sbjct: 272 VTEQDERIAGYAFEAGKACIFVVNKWDAIEKDNSSVGRFVDKIRTEFKYL--AFVPIVFV 329 Query: 192 SSVKRKGI----EVLRKAILETI 210 S+ + + E + K + + + Sbjct: 330 SAKTGQRLNRIMEEVEKVMAQYV 352 >gi|149190086|ref|ZP_01868363.1| GTP-binding protein EngA [Vibrio shilonii AK1] gi|148836116|gb|EDL53076.1| GTP-binding protein EngA [Vibrio shilonii AK1] Length = 494 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 201 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMQRDDRE 253 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G R + V+ + +V+ L V L+ID R + D + F Sbjct: 254 YVLIDTAGVRRRRRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 311 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + ++ + + S++ G+ L ++ Sbjct: 312 LNSGRSIVIAVNKWDGLDTDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 369 Query: 206 ILET 209 + E Sbjct: 370 VQEA 373 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + L K Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFLVDGRAGLTSADEAIAQHLRKI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + ++ ++ +G+ L I Sbjct: 110 EKPSFLVINKVDGIDADAASA---------EFWQLGVEDMYHIAAAHGRGVTAL---IER 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|330997747|ref|ZP_08321586.1| ribosome biogenesis GTPase Der [Paraprevotella xylaniphila YIT 11841] gi|329569846|gb|EGG51604.1| ribosome biogenesis GTPase Der [Paraprevotella xylaniphila YIT 11841] Length = 437 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P A GR NVGKSSLIN + + ++ G T+ + F Sbjct: 172 DENIPRFAVVGRPNVGKSSLINAFIGEERN-IVTDIAGTTRDSIYTRYTKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEYYSVM--RSIRAIENSDVCILMLDAERGIEAQDLNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 + S +V+ K D + + + +Y IRN P +I S++ ++ I Sbjct: 283 QRNNKSLVVVVNKWDLVEEKNTV-VMNEYEYAIRNRMAPFDDFPIIFASALTKQRI 337 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 60/176 (34%), Gaps = 20/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + +++D Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QTRHAIVSDEAGTTRDRQY------GKSEWTGCEFSVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ + + + V L+D R+GV +D+ V + L + Sbjct: 58 GGWVVNSDDIFEEEIRKQVTLAT----EEADVVLFLVDVRNGVTDLDEAVANILRRTKKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D T E Y + S+ G L I+ Sbjct: 114 VILVANKAD---------TNEWIYSAAEFYALGLGDPYCISAATGSGTGELLDQIV 160 >gi|114562298|ref|YP_749811.1| GTP-binding protein EngA [Shewanella frigidimarina NCIMB 400] gi|122300418|sp|Q085U2|DER_SHEFN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|114333591|gb|ABI70973.1| small GTP-binding protein [Shewanella frigidimarina NCIMB 400] Length = 488 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 71/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+LIN ++ + + + PG T+ + + Sbjct: 196 QNLPIKLAIIGKPNVGKSTLINRILGEERVV-VYDEPGTTRDSIYI------PMSREGRE 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +++ L V L+ID R G+ + D + F Sbjct: 249 YVLIDTAGVRRRSKVNEVIEKFS--VIKTLKAVEDANVVLLVIDAREGIAEQDLGLLGFT 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 307 LNAGRALVIAINKWDGIDQKVKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLYES 364 Query: 206 ILETIN 211 I E + Sbjct: 365 IEEAYD 370 Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAFLAGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V + D R G+ D + L + Sbjct: 55 VDTGGI---DGSEEGIET--KMAEQSLAAIEEADVVLFMTDARAGMTAADLAIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 +V K+D + Sbjct: 110 DKVTFVVANKVDGID 124 >gi|332652769|ref|ZP_08418514.1| ribosome-associated GTPase EngA [Ruminococcaceae bacterium D16] gi|332517915|gb|EGJ47518.1| ribosome-associated GTPase EngA [Ruminococcaceae bacterium D16] Length = 441 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 13/178 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ NVGKSSL+N ++ ++ + SN G T+ S +N +D Sbjct: 178 KVAIIGKPNVGKSSLVNRILGQERV-IVSNMAGTTRDAV------DSVFENEKGKFLFID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + L ERS +LID + GV + D V + Sbjct: 231 TAGMRKKSKVDDRIEKFSVLRATMAIERSD--VCLILIDAQEGVTEQDTKVAGLAHEAGK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAI 206 + IV+ K D + +T++K + + + + +I S++ + ++ L I Sbjct: 289 ACIIVVNKWDAIEKDG--KTMDKMRKDVMRDLSYMTYAPIIFISALTGQRVDRLFDLI 344 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 19/181 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS L N L ++ L+ + PG T+ + + + + Sbjct: 2 RPLVAIVGRPNVGKSMLFNKLCGQR-LSIVEDTPGVTRDRLY------AQCEWRNRTFDI 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G P + + + ST + + D + G+ DQ+V + L + Sbjct: 55 VDTGGI----EPGTDDQILSFMREQAEIAISTATVIVFVCDVKTGMTASDQEVANMLLRS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K D++ + Y + I S+V G L A E Sbjct: 111 GKPVVLAVNKADQVGRENPD--------VYEFYNLGLGDPIAVSAVHGHGTGDLLDACFE 162 Query: 209 T 209 Sbjct: 163 Y 163 >gi|33152292|ref|NP_873645.1| GTP-binding protein EngA [Haemophilus ducreyi 35000HP] gi|41017016|sp|Q7VM29|DER_HAEDU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|33148515|gb|AAP96034.1| conserved putative GTP-binding protein [Haemophilus ducreyi 35000HP] Length = 510 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + + PG T+ + ++ + ++D Sbjct: 221 KIAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQEYTIID 273 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R G+ D + F+ Sbjct: 274 TAGVRKRGKINLAVEKFS--VIKTLQAIQDANVVLLTIDAREGISDQDLSLLGFILNAGR 331 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D LS ++ + + V S++ G+ L ++ E Sbjct: 332 SLVIVVNKWDGLSYDIKEQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSVKEA 388 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 69/178 (38%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAG------HDFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ ++ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGIE--EKMAEQSLLAIEEADVVLFLVDARAGLLPADIGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y EV ++ + +G+ L + +L Sbjct: 111 KTTVVVANKTDGIDADS---------HCGEFYQLGLGEVAKIAAAQGRGVTQLIEQVL 159 >gi|282895428|ref|ZP_06303565.1| GTP-binding protein engA [Raphidiopsis brookii D9] gi|281199461|gb|EFA74324.1| GTP-binding protein engA [Raphidiopsis brookii D9] Length = 453 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 13/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ P++ L + ++A GR NVGKSSL+N V + A S G T+ Sbjct: 162 IKYTPQVEDLQENSEVKVAIVGRPNVGKSSLLNAFVGEER-AIVSPISGTTRDTI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ A L+D G + + + + I R V L++D GV Sbjct: 216 -DTLIEREGQAYRLIDTAGIRKKKHVEYGTEFFS--INRAFKAIRRADVVLLVLDALDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + DQ + + + + IV+ K D + + + R + T + I S+V Sbjct: 273 TEQDQKLAGRIIEDGRACIIVVNKWDAVEKDSYTIYDHEKSLEARLHFTEWADTIFVSAV 332 Query: 195 KRKGIEVLRKAILETIN 211 + +E IL+ +N Sbjct: 333 TGQRVEK----ILDLVN 345 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 67/181 (37%), Gaps = 19/181 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+ +N L + A + PG T+ + + + Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQT-AIVHDEPGVTRD------RTYRPAFWQNREFLV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + I S ++D + G+ D+++ +L ++ Sbjct: 56 VDTGGLVFNDNTEFLPLIRQQAIT----ALSEACAAIFVVDGQAGLTPADEEIAEWLRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + Q ++ +++ + E P S++ G L +++ Sbjct: 112 TVPTLLAVNKC----ESPDQGVIQASEF----WELGLGEPYPISAIHGSGTGDLLDELIK 163 Query: 209 T 209 Sbjct: 164 Y 164 >gi|269103271|ref|ZP_06155968.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae CIP 102761] gi|268163169|gb|EEZ41665.1| GTP-binding protein EngA [Photobacterium damselae subsp. damselae CIP 102761] Length = 499 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 207 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQE 259 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +++ L V L+ID R + D + F Sbjct: 260 YVLIDTAGIRRRKNMHEAVEKFS--VIQTLKAVEDANVVLLIIDARENISDQDLSLLGFA 317 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + KT+ R + S++ G+ L ++ Sbjct: 318 LNAGRSLVIAVNKWDGLDNDVKERV--KTELDRRLGFVDFARIHFISALHGTGVGHLYES 375 Query: 206 ILET 209 ++E Sbjct: 376 VVEA 379 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + N + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEINEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L V L+D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLMAIEEADVVLFLVDGRAGLTAADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 +V+ KID + Sbjct: 110 NKPTFLVVNKIDGID 124 >gi|239501067|ref|ZP_04660377.1| GTP-binding protein Era [Acinetobacter baumannii AB900] Length = 342 Score = 117 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID H Q D V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDA-HKWTQNDDLVLEKLKNADM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E+IP S+++ +E L + I + + Sbjct: 149 PVILVINKADTFGDKREILPLIQERAKLMNFA----EIIPVSALRGANLEHLSETIEKYL 204 Query: 211 NY 212 Y Sbjct: 205 PY 206 >gi|126668584|ref|ZP_01739538.1| GTP-binding protein EngA [Marinobacter sp. ELB17] gi|126626989|gb|EAZ97632.1| GTP-binding protein EngA [Marinobacter sp. ELB17] Length = 474 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 15/180 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L+N ++ + + + PG T+ + + L+D Sbjct: 179 IGIVGRPNVGKSTLVNRMLGEERVV-VYDLPGTTRDSIYI------PYERLGQEYTLIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ V+ + I++ L V L+ID R G+ D + F+ S Sbjct: 232 AGVRRRKNVREVVEKFS--IIKTLQAIDDAHVVILVIDAREGLVDQDMHLMGFVLSAGRS 289 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 I + K D ++ + E+ + + A I S++ G+ + +++N Sbjct: 290 LVIAINKWDGMNGEDRDKVKEQIRRRLDFLDYADKHYI--SALHGSGV----GVMYQSVN 343 Score = 88.3 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 21/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N + ++ A ++ PG T+ + ++D Sbjct: 5 IALVGRPNVGKSTLFNQMTRSRD-ALVADFPGLTRDRKYGEGN------YENQRFIVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + + L V ++D R GV DQ + L + Sbjct: 58 GGLM-----GDELGLDAAMAKQSLQAVEEADIVLFIVDGRAGVMPGDQVLADQLRRSGTQ 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K D P Y ++ +G+ + + +L Sbjct: 113 AHLVINKTDGQDPNLVAS---------DFYALGFQSQFRIAASHNRGVRSMLEILL 159 >gi|262273709|ref|ZP_06051522.1| GTP-binding protein Era [Grimontia hollisae CIP 101886] gi|262222124|gb|EEY73436.1| GTP-binding protein Era [Grimontia hollisae CIP 101886] Length = 304 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N LV +K L+ TS P T+H V + VD Sbjct: 13 IAIVGRPNVGKSTLLNRLVGQK-LSITSRKPQTTRHRIMGVDT------RDGYQAVYVDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S + + V L+D H Q D+ V + L K + Sbjct: 66 PGLHI-----EEKRTINRLMNRAASSSLTDVELVLFLVDGTH-WTQDDEMVLNKLKKAQL 119 Query: 151 SYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +++ K+D + L++ + +V+P S+ I+V+ K + + Sbjct: 120 PTVLLVNKVDNVKEKGELFPHLQEISQKM-----DFIDVVPVSAKHGTNIDVVEKLVRKH 174 Query: 210 I 210 + Sbjct: 175 L 175 >gi|192362315|ref|YP_001981972.1| GTP-binding protein EngA [Cellvibrio japonicus Ueda107] gi|238692428|sp|B3PDM5|DER_CELJU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|190688480|gb|ACE86158.1| GTP-binding protein EngA [Cellvibrio japonicus Ueda107] Length = 466 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A +IA GR NVGKS+L+N L+ + + PG T+ + F Sbjct: 173 EATGIKIAIVGRPNVGKSTLVNRLLGEDRVV-VYDQPGTTRDSIYINYTRFDK------P 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + IV+ + + V L++D G+ + D + Sbjct: 226 YTLIDTAGVRRRKNIDLAVEKFS--IVKTMQAIADANVVILVMDASEGIVEQDLHLMGTA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I L K D L + + + +R + S++ G+ L K+ Sbjct: 284 IEAGRALVIALNKWDGLDESHKYYVKNELERRLR--FVDFANIHFISALHGTGVGNLYKS 341 Query: 206 ILET 209 I + Sbjct: 342 IEQA 345 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L N ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLTNSRD-ALVADYPGLTRDRKY------GEARLENRRFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ +DS + + L V ++D R G+ D+ + L Sbjct: 55 IDTGGI---SGEEEGIDS--AMAGQSLLAIQEADIVLFIVDSRVGLNPADELIARHLRVH 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V KID + P A L Y EV PT++ +G+ L + +L Sbjct: 110 NKKTYVVANKIDGMDPDIA---------LAPFYELGMGEVHPTTATHGRGVRSLMEDVL 159 >gi|145628971|ref|ZP_01784770.1| GTP-binding protein EngA [Haemophilus influenzae 22.1-21] gi|144978474|gb|EDJ88197.1| GTP-binding protein EngA [Haemophilus influenzae 22.1-21] Length = 504 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 66/184 (35%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 212 QDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDGQQ 264 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G V+ + +++ L V L ID R + D + F+ Sbjct: 265 YTLIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFI 322 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D L + + V S++ G+ L + Sbjct: 323 LNAGRSLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 380 Query: 206 ILET 209 I E Sbjct: 381 IKEA 384 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIVGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|89072706|ref|ZP_01159271.1| GTP-binding protein EngA [Photobacterium sp. SKA34] gi|89051526|gb|EAR56980.1| GTP-binding protein EngA [Photobacterium sp. SKA34] Length = 500 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 15/186 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 208 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQE 260 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +++ L V L+ID R + D + F Sbjct: 261 YVLIDTAGIRRRKNMHQAVEKFS--VIQTLKAVEDANVVLLIIDARENISDQDLSLLGFA 318 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 S I + K D L E E+ K + + S++ G+ L Sbjct: 319 LNAGRSLVIAVNKWDGLD----NEVKERVKSELDRRLGFVDFARIHFISALHGTGVGHLY 374 Query: 204 KAILET 209 ++++E Sbjct: 375 ESVIEA 380 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAELEEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIEEADVVLFLVDGRAGLTAADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 +V+ K+D + Sbjct: 110 EKPTFLVVNKVDGID 124 >gi|67922416|ref|ZP_00515927.1| tRNA modification GTPase TrmE:Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii WH 8501] gi|67855760|gb|EAM51008.1| tRNA modification GTPase TrmE:Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii WH 8501] Length = 460 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 26/184 (14%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 ++A GR NVGKSSL+N +R + A ++ PG T+ + S L + Sbjct: 224 NGLKVAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDVI------ESQLVVGGIPIQ 276 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G V+ G + R S V L +D D +++ ++ Sbjct: 277 VLDTAGIRQ---TTDQVEKIG--VERSQLAASQADLVLLTVDATVVWSNQDNEIYQAIEH 331 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V+ KID +P + +PT E++ TS+ +GIE L AIL Sbjct: 332 R--PVILVINKIDLATPD------------LAQFPTQISEIVKTSAANNQGIEALETAIL 377 Query: 208 ETIN 211 + I+ Sbjct: 378 KAIH 381 >gi|67922213|ref|ZP_00515727.1| Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii WH 8501] gi|67855916|gb|EAM51161.1| Small GTP-binding protein domain:GTP-binding [Crocosphaera watsonii WH 8501] Length = 465 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 9/188 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + +P LP ++ GR NVGKSSL+N + +K A S G T+ Sbjct: 175 ITYLPSPDELPDREEINVSIIGRPNVGKSSLLNAFLGKKR-AIVSPISGTTRDAI----- 228 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ L+D G + + + I R V L+ID GV Sbjct: 229 -DTVVERGEKTYRLIDTAGIRRKKNVNYGAEFFS--INRAFKAIRRADVVLLVIDAIEGV 285 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D + + + + IV+ K D + + K K + R Y ++I S++ Sbjct: 286 TDQDIKLADRIIDEGRAAIIVVNKWDAIDKDSYTIYEYKKKVMSRLYFMEWADLIFVSAM 345 Query: 195 KRKGIEVL 202 K +E + Sbjct: 346 SGKRVEKI 353 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+ +N L + A + PG T+ + + + Sbjct: 16 LPIVAIIGRPNVGKSTFVNRLA-KDRQAIVHDEPGITRD------RTYRPAFWADRDFQV 68 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + ++ + ++D + G+ D ++ +L ++ Sbjct: 69 VDTGGLVF----DDETEFLPLIREQAMAALTEASVAIFVVDGQLGLTAGDSEIADWLRQQ 124 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + Q + E P S + G L ++ Sbjct: 125 EVPVLLAVNKCESPDQGLIQAA--------EFWELGLGEPYPVSGIHGNGTGELLDELIT 176 Query: 209 TI 210 + Sbjct: 177 YL 178 >gi|317121946|ref|YP_004101949.1| ribosome-associated GTPase EngA [Thermaerobacter marianensis DSM 12885] gi|315591926|gb|ADU51222.1| ribosome-associated GTPase EngA [Thermaerobacter marianensis DSM 12885] Length = 455 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G +A GR NVGKSSL+N L+ + + S+ PG T+ + Sbjct: 183 EPGEIAVAIVGRPNVGKSSLVNRLLGEERVV-VSDIPGTTRDAV------DVLWRRGERV 235 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K +V+ + L + R+ + C+ L D R D+ + Sbjct: 236 FRFIDTAGLRRKSRVKDDVEFYSTLRTQRALARADVACLVL--DARDPATDQDKRIAGMA 293 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYP-TAHPEVIPTSSVKRKGIEVLR 203 ++ + + + K D ++ +T ++ + + R Y ++ S++ + I+ L Sbjct: 294 LEEGKACVLAVNKWDLVARGP--DTADQYREALYREYDFLQFAPIVFLSALTGQRIDRLV 351 Query: 204 KAI 206 + I Sbjct: 352 EWI 354 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 21/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N ++ R+ LA + PG T+ + D++ A LV Sbjct: 3 PIVAIVGRPNVGKSTLFNRIIERR-LAIEDDVPGVTRDR-LYADTDWAG-----RAFTLV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + +++D + GV D++V L + Sbjct: 56 DTGGLAEGDDPLTVQVRRQVE-----AAVREADVLVMVVDGQAGVTPADEEVARLLRQAQ 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D + +Y + E IP ++ + + L A++ Sbjct: 111 KPTILAVNKVD-------DPHWDGVQY--DFFRLGLGEPIPVAAGPGRNVGDLLDAVVRA 161 Query: 210 I 210 + Sbjct: 162 L 162 >gi|220906981|ref|YP_002482292.1| GTP-binding protein EngA [Cyanothece sp. PCC 7425] gi|254783149|sp|B8HQE1|DER_CYAP4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219863592|gb|ACL43931.1| small GTP-binding protein [Cyanothece sp. PCC 7425] Length = 453 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 19/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L+N L + +A + PG T+ + + Sbjct: 2 TLPVVAIVGRPNVGKSTLVNRLTGER-VAIVHDQPGVTRD------RTYRPSFWQDRDFL 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G +A + ++ R L++D + G+ D+++ +L + Sbjct: 55 VVDTGGLVFADDTEFLPLIRQQVVTALSEAR----VAILVVDGQQGITAADEEIAQWLRQ 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +++ + + K + + + E P S++ G L ++ Sbjct: 111 QSLPVLVAVNKC--------ESPQQGLAQGAEFWELGLGEPFPISAIHGNGTGELLDQVV 162 Query: 208 ETI 210 + Sbjct: 163 SYL 165 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 9/177 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +A GR NVGKSSL+N +V + A S G T+ + ++ + Sbjct: 174 EEDIINVAIVGRPNVGKSSLLNAVVGEQR-AIVSPISGTTRDAI------DTLVERDGQR 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + +G I R V L++D GV + DQ + + Sbjct: 227 YRLIDTAGIRKQKNVDYGPEFFG--INRAFKAIQRAEVVLLVLDALDGVTEQDQKLAGRI 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + IV+ K D + + + + R + I S+ + +E + Sbjct: 285 VDEGCACVIVVNKWDAVEKDSYTIYDYQHQVEQRLNFIGWSDHIFISAATGQRVEKI 341 >gi|260583275|ref|ZP_05851051.1| ribosome-associated GTPase EngA [Haemophilus influenzae NT127] gi|260093682|gb|EEW77594.1| ribosome-associated GTPase EngA [Haemophilus influenzae NT127] Length = 503 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 66/184 (35%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 211 QDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQ 263 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G V+ + +++ L V L ID R + D + F+ Sbjct: 264 YTLIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFI 321 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D L + + V S++ G+ L + Sbjct: 322 LNAGRSLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 379 Query: 206 ILET 209 I E Sbjct: 380 IKEA 383 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|257457196|ref|ZP_05622372.1| ribosome-associated GTPase EngA [Treponema vincentii ATCC 35580] gi|257445455|gb|EEV20522.1| ribosome-associated GTPase EngA [Treponema vincentii ATCC 35580] Length = 506 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 10/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P IA G+ N GKS+L N L + + + S+ G T+ + Sbjct: 233 PADTAIRIALIGKPNTGKSTLSNYLT-KTSASIVSDIAGTTRDVV------EGEFFYKGR 285 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + D G K++++ + +VR + V+ LID G+ + D+ + Sbjct: 286 QFIIQDTAGIRRKTKVKEDIEYYS--VVRAMKSLENADIVFHLIDAEEGLTEQDKKIIVQ 343 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 K+ + VL K D + E+ ++ + ++P S+ K GI L Sbjct: 344 ATKRGLGVIFVLNKWDLVKGEKKFRDAEQYIKIM-FGKMEYAPIVPVSAQKGSGIPDLLN 402 Query: 205 AILETIN 211 LE + Sbjct: 403 TALELFD 409 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 73/190 (38%), Gaps = 24/190 (12%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P + +GR NVGKS+L N + RK A T PG T+ + + N LP + Sbjct: 57 ENTPLVVIAGRPNVGKSTLFNRFL-RKRRAITDPTPGVTRDPI-----EAQAIINGLP-V 109 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC---VYLLIDCRHGVKQIDQDVFS 143 L+D G+ R+ KN D L+V + LR + LL++ D++ Sbjct: 110 RLMDTGGFKLTRSGDKNDDMMDELVVE--KTQDALRRADKILLLLEAS-APTAEDEEFIR 166 Query: 144 FLDKKAVSYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 FL Y DKL + E P ++ S+ I L Sbjct: 167 FLR----PY------WDKLITAVNKTEGGRGEAEAYNYLSFGFPSLLCISAEHGDNITPL 216 Query: 203 RKAILETINY 212 + I + +++ Sbjct: 217 AEEITKGLDF 226 >gi|226357377|ref|YP_002787117.1| GTP-binding protein EngA [Deinococcus deserti VCD115] gi|259645869|sp|C1D094|DER_DEIDV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226319367|gb|ACO47363.1| putative GTP-binding protein [Deinococcus deserti VCD115] Length = 441 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 24/181 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL N L+ R+ A ++ PG T+ + + + + LVD Sbjct: 3 KVAIVGRPNVGKSSLFNRLIGRRE-AVVADFPGVTRDAKEGL------MLYHNHRITLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G D W I + V ++D R G+ D +V +L + Sbjct: 56 TGGLWSG-------DEWEAAIREKAEWAMEGAQAVVFVLDPREGLSAADYEVADWLRRVG 108 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V KID + E YL + + + S+ +G++ L ++ Sbjct: 109 KPVIVVANKID----SPKHEV-----YLAELWGLGFGDPVAISAEHARGLDELLDRVMTH 159 Query: 210 I 210 + Sbjct: 160 L 160 Score = 107 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 77/192 (40%), Gaps = 21/192 (10%) Query: 21 IGLLP--KAGPPEIA-----FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP PE+A GR NVGKSSL+N + N A ++ PG T+ + V Sbjct: 157 MTHLPADDEDVPEVAPIRISLIGRPNVGKSSLLNAITNTDR-AIVADQPGTTRD-SLDVE 214 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 DF + LVD G + P ++ + + +RS L ++L+++ Sbjct: 215 WDFGGQR-----FVLVDTAGIR--KKPDTAIEDYAIQRSQAAIQRSDL--IWLVVNAT-D 264 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + + + + +V+ K D + + T + + + + + TS+ Sbjct: 265 MGDHELKLANLAYESGKPVIVVVNKWDLVPDEELKRTEKDLNQKL--HHISFAPRVYTSA 322 Query: 194 VKRKGIEVLRKA 205 + GI + Sbjct: 323 INDYGIHEMLAE 334 >gi|149375007|ref|ZP_01892780.1| predicted GTPase [Marinobacter algicola DG893] gi|149360896|gb|EDM49347.1| predicted GTPase [Marinobacter algicola DG893] Length = 453 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 11/168 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L+N ++ + + PG T+ + + L+D Sbjct: 158 IGIVGRPNVGKSTLVNRMLGEDRV-IVYDMPGTTRDSVYI------PFERMDNQYTLIDT 210 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + V+ + I++ L V L+ID R G+ D + F+ S Sbjct: 211 AGVRRRKNVSEVVEKFS--IIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRS 268 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + K D + P + E+ + + A I S++ G+ Sbjct: 269 LVVAVNKWDGMDPEDRAKVKEQVQRRLDFLDYADKHYI--SALHGSGV 314 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 42/150 (28%), Gaps = 20/150 (13%) Query: 50 VNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 + R A ++ PG T+ + ++D G + Sbjct: 1 MTRSRDALVADFPGLTRDRKYGEGN------YEGQRFIVIDTGGLTGGEEGLDAEMARQS 54 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 + V L+D + G+ D+ + + L K +V+ K D P A Sbjct: 55 M-----QAVEEADIVLFLVDGKAGLNGGDELIAAHLRKTGKRAHLVVNKTDGQDPDIAAS 109 Query: 170 TLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 Y ++ +GI Sbjct: 110 ---------DFYALGFDSTYLIAASHNRGI 130 >gi|332530165|ref|ZP_08406113.1| GTP-binding protein Der [Hylemonella gracilis ATCC 19624] gi|332040357|gb|EGI76735.1| GTP-binding protein Der [Hylemonella gracilis ATCC 19624] Length = 444 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G A +GR NVGKS+LIN + + L + PG T+ + Sbjct: 175 EPGVIRFAVAGRPNVGKSTLINTWLGEERL-IAFDMPGTTRDAI------RVPFERQGQK 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L + V LL+D GV D + ++ Sbjct: 228 FELIDTAGLRRKGRVFEAVEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + + K D + Q+ + + + + S+ KR+G+E L K+ Sbjct: 286 LESGRAVVLAVNKWDAVDDYQRQQLQRQLETRL--TFLKFANLHLISARKRQGLEPLWKS 343 Query: 206 ILET 209 +L+ Sbjct: 344 MLKA 347 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ G T+ + + N + ++ Sbjct: 3 PVLALVGRPNVGKSTLFNRLTQTRD-AIVADYAGLTRD------RHYGNGRQGRREFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + V ++D R G+ D D+ ++L K Sbjct: 56 DTGGF----EPTAETGIYKEMANQTRQAVAEADAVIFVVDARAGLSAQDHDIANYLRKLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + K E +++ L Y EV+P S+ +G+ L LE Sbjct: 112 KPCVLTANKA---------EGMQEGAQLAEFYELGLGEVLPVSAAHGQGLRTLVDQALEP 162 Query: 210 IN 211 +N Sbjct: 163 LN 164 >gi|290968707|ref|ZP_06560245.1| ribosome-associated GTPase EngA [Megasphaera genomosp. type_1 str. 28L] gi|290781360|gb|EFD93950.1| ribosome-associated GTPase EngA [Megasphaera genomosp. type_1 str. 28L] Length = 443 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 19/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +V +K +A + PG T+ +F + + ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIV-KKRIAIVEDIPGVTRDRIYF------DAEWLGREFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + A + + + + + ++D + G++ D++V + L Sbjct: 57 DTGGIEFVDAADRI---FTDMRYQAELAIREADVILFVVDGKTGMQPQDEEVANILRTCG 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KID ++E+ + Y + I S+V + L ++L+ Sbjct: 114 KPVLLVVNKID---------SVEQEMNMYEFYALGMGDPIGVSAVNLMNLGDLLDSVLQH 164 Query: 210 INY 212 I + Sbjct: 165 IQH 167 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 17/189 (8%) Query: 20 EIGLLPKAGPPE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 I LP E IA GR NVGKSS+ N L+ ++ + SN PG T+ Sbjct: 164 HIQHLPTPEEREDTIHIALVGRPNVGKSSMTNALLGQERV-IVSNVPGTTRDSI------ 216 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + N + L+D G V+ + +VR L L++D + GV Sbjct: 217 DTYWTYNDTSFVLIDTAGMRRKAKVDIPVERYS--VVRALRAVDRSDVAVLVLDAQDGVT 274 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + D+ + ++ + IV+ K D + T+Q E + + A ++ S+ Sbjct: 275 EQDKKIAGYIHEAGKGCIIVVNKWDLIDKDSKTSQAFEEDIRRELAFLQYA--PILFASA 332 Query: 194 VKRKGIEVL 202 + ++ + L Sbjct: 333 LTKQRVNRL 341 >gi|163797497|ref|ZP_02191448.1| GTP-binding protein engA [alpha proteobacterium BAL199] gi|159177246|gb|EDP61805.1| GTP-binding protein engA [alpha proteobacterium BAL199] Length = 467 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 20/179 (11%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L N L ++ A + PG T+ + + + ++D Sbjct: 4 KVAVIGRPNVGKSTLFNRLTGTRH-ALVDDTPGVTRDRR------EGDGRIADLSFRVID 56 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G A + + + V++LID R G+ +D +L + V Sbjct: 57 TAGLEDAFDDSLEA----RMRRQTERAVAEADLVFMLIDARAGITPLDSHFADWLRRVDV 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 ++ K E L Y + +P S+ +G+ L I E Sbjct: 113 PVVVLANKC---------EGRAGAAGLAEAYSLGLGDPVPVSAEHGEGMGELYDIIREL 162 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 71/192 (36%), Gaps = 9/192 (4%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E+ P+ GP +A GR NVGKS+L+N L+ L T G T+ Sbjct: 190 EMEAEPEVGPIRLAIVGRPNVGKSTLVNRLIGEDRL-LTGPEAGITRDAI------EVEW 242 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + + LVD G ++ ++ V L++D +++ D Sbjct: 243 QYRDRPIRLVDTAGMRRKARVQEKLERLS--TADTRRAVRYAHVVLLVLDGEMMLEKQDL 300 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + ++ + I K D + A + + + +P S+V+ + Sbjct: 301 TIARMALEEGRALVIAANKWDVIQDKNAASQMLRDRLDTSLTQVRGVPWVPVSAVRGTNL 360 Query: 200 EVLRKAILETIN 211 L A+LET + Sbjct: 361 TKLLDAVLETYD 372 >gi|257386691|ref|YP_003176464.1| GTP-binding protein [Halomicrobium mukohataei DSM 12286] gi|257168998|gb|ACV46757.1| GTP-binding protein HSR1-related [Halomicrobium mukohataei DSM 12286] Length = 205 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 27/196 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI GRSNVGKS+L+ + T PG T+ N F D++ P + D Sbjct: 11 EIVLVGRSNVGKSTLMREITGHS--VDTGQKPGVTRKPNHF---DWAG-----PDFMVTD 60 Query: 91 MPGYGYAR-APKKNVDSWGGLIVRYLSERST--LRCVYLL-----IDC--RH-GVKQI-- 137 +PG+G+ P+ + +VRY+ + L + +L +D RH G +I Sbjct: 61 LPGFGFMNGVPEDVREQIKTDVVRYVEANADKILVGILVLDGKAAVDIIDRHSGPDEIPH 120 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVK 195 D ++F FL V + + K+DK+ E L + YP E I S K Sbjct: 121 DVELFHFLRDVDVEPVVAVNKMDKVDDEE--ERLNDICDRLGLYPPWQQWQETIAPISAK 178 Query: 196 RKGIEVLRKAILETIN 211 R ++ L +A+ ++ Sbjct: 179 RGTVDALDEAVRHHLH 194 >gi|212638926|ref|YP_002315446.1| GTP-binding protein EngA [Anoxybacillus flavithermus WK1] gi|212560406|gb|ACJ33461.1| Predicted GTPase [Anoxybacillus flavithermus WK1] Length = 449 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 74/183 (40%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 A + GR NVGKSSL+N ++ + + S+ G T+ + K + Sbjct: 185 DADVIKFCLIGRPNVGKSSLVNAILGEERV-IVSDIAGTTRDAI------DTTFKRDGQE 237 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V ++I+ G+ + D+ + + Sbjct: 238 YVIIDTAGMRKRGKVYESTEKYSVL--RALKAIERSDVVLVVINAEEGIIEQDKKIAGYA 295 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T+ + + IR++ + ++ S+ ++ + L Sbjct: 296 HEAGRGVVIVVNKWDAIEKDE--KTMNEFEKNIRDHFQFLDYAPIVFVSAKTKQRLHKLL 353 Query: 204 KAI 206 I Sbjct: 354 PVI 356 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 65/187 (34%), Gaps = 21/187 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + P +A GR NVGKS++ N +V + ++ + PG T+ + S+ + Sbjct: 8 VKECENMSKPVVAIVGRPNVGKSTIFNRIVGER-ISIVEDVPGVTRDRIY------SSAE 60 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 ++D G P I + + + R GV D++ Sbjct: 61 WLNTTFNMIDTGGIDIGDEPLLTQIRQQAEI-----AIDEADVIIFMTNGRDGVTAADEE 115 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 V L + + + KID + + + Y E IP S GI Sbjct: 116 VAKILYRSNKPVVLAVNKID---------NPDMRENIYDFYTLGFGEPIPISGTHGLGIG 166 Query: 201 VLRKAIL 207 L A++ Sbjct: 167 DLLDAVV 173 >gi|332982413|ref|YP_004463854.1| ribosome-associated GTPase EngA [Mahella australiensis 50-1 BON] gi|332700091|gb|AEE97032.1| ribosome-associated GTPase EngA [Mahella australiensis 50-1 BON] Length = 437 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV R+ ++ + PG T+ + + + +LVD Sbjct: 6 VAIIGRPNVGKSTLFNRLVGRR-ISIVDDTPGITRDRIYADVEWTGKI------FSLVDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ +I + T + L++D G+ D++V L + S Sbjct: 59 GGIDFSGKDS----IVNQMIRQAQYAIDTADVILLVVDANEGMTSADEEVADILRRSNKS 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K+D + L Y + IP S+ GI L I+ IN Sbjct: 115 VLLVCNKVDNFNRKDL---------LYDFYKLGLGDPIPISAGNGLGIGDLLDKIVAHIN 165 Score = 107 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 13/180 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IA G+ N GKSS++N L+ ++ + S+ PG T+ +++ Sbjct: 172 DEETIRIAVIGKPNAGKSSIVNRLLGQERV-IVSDQPGTTRDAI------DVLIEHEGDR 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + + R L L+ID GV + D + F Sbjct: 225 YILIDTAGLRRKAKINEAVERYS--VSRALEAVQRSDVAALVIDAVEGVTEQDAKIAGFA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 +K ++L K D + +T+ + K I + V+ S+ + ++ + Sbjct: 283 HEKGKGLIVLLNKWDLIEKD--NKTVSRYKQDIAEKLGFIGYAPVLFISAKTGQRMDKIL 340 >gi|301168789|emb|CBW28380.1| predicted GTP-binding protein [Haemophilus influenzae 10810] Length = 503 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 66/184 (35%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 211 QDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQ 263 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G V+ + +++ L V L ID R + D + F+ Sbjct: 264 YTLIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFI 321 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D L + + V S++ G+ L + Sbjct: 322 LNAGRSLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 379 Query: 206 ILET 209 I E Sbjct: 380 IKEA 383 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|317153825|ref|YP_004121873.1| ribosome-associated GTPase EngA [Desulfovibrio aespoeensis Aspo-2] gi|316944076|gb|ADU63127.1| ribosome-associated GTPase EngA [Desulfovibrio aespoeensis Aspo-2] Length = 497 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 11/168 (6%) Query: 35 SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGY 94 GR N GKSS+IN ++ L S+ G T+ + VD G Sbjct: 191 LGRPNAGKSSIINRIIGTDRL-IVSDVAGTTRDSI------DVTFERQGKRYTFVDTAGV 243 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 +++++ ++R L L+ID GV + D+ + FL K+ + + Sbjct: 244 RRRANIQEHLEKIS--VIRALKNSKRSDVTILVIDITLGVGRQDKRLIEFLAKEKTPFMV 301 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 V K D + + + LE + +R P + +I TS+ K GI + Sbjct: 302 VCNKADLIPRSETKRALEAFREELRIIP--YVPLIMTSANKGVGIGKI 347 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 18/180 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L+ RK+ A T + PG T+ + + L Sbjct: 2 LPIVALVGRPNVGKSTLFNRLL-RKSRAITHDLPGVTRDRIY------GECQMGDVKFDL 54 Query: 89 VDMPGYGYARA--PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G P+ + D + + + + ++D + G+ +D+ F+ Sbjct: 55 VDTGGMVLESEATPELSKDFEDEIFEQAREAINEAHAILFVVDGKQGMSPLDEQAAEFVR 114 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +++ K+D + E + V P S+ + +R+ + Sbjct: 115 RSGKPVMVLVNKVD---------SHEVAAQGTAEFHALGLPVFPVSAAHGYNLHEVREKV 165 >gi|254478784|ref|ZP_05092152.1| putative GTPase [Carboxydibrachium pacificum DSM 12653] gi|214035296|gb|EEB76002.1| putative GTPase [Carboxydibrachium pacificum DSM 12653] Length = 439 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 76/196 (38%), Gaps = 19/196 (9%) Query: 21 IGLLPKAGP------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 I LP+ +IA GR NVGKSSL+N ++ + + S+ PG T+ Sbjct: 162 IKRLPENDVEYEEETIKIAVIGRPNVGKSSLVNRILGEERV-IVSDIPGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + L+D G ++++ + L R L+ L+ID G Sbjct: 216 -DTPFTKDGRNYILIDTAGIRRKSRISESIERYSVL--RALAAIERADICLLMIDATEGP 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I++ K D + T +E E + + + ++ S Sbjct: 273 TEQDTKIAGYAFENGKGIIILVNKWDIVEKDSNTYKEYTEMIREKLA--FISFAPILFIS 330 Query: 193 SVKRKGIEVLRKAILE 208 + + I + + + + Sbjct: 331 AKTGQRIHKVLETVDK 346 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 19/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N ++ ++ ++ + PG T+ + N + LVD Sbjct: 6 VAIVGRPNVGKSTLFNRIL-KRRISIVEDIPGVTRDRIY------GNAEWLNRKFILVDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G PK + S L V E + L + ++D R G+ D+++ + L K Sbjct: 59 GGLDPD--PKDVIFSKVKLQVEAAIEAADL--ILFVVDAREGLVPEDEEIANMLRKTKKE 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D E + E IP S+ GI L +++ + Sbjct: 115 VILVCNKVDSFK--------EMPASFYDFFKLGLGEPIPISASNGLGIGELLDEVIKRL 165 >gi|145635317|ref|ZP_01791020.1| GTP-binding protein EngA [Haemophilus influenzae PittAA] gi|145267461|gb|EDK07462.1| GTP-binding protein EngA [Haemophilus influenzae PittAA] Length = 504 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 66/184 (35%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 212 QDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQ 264 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G V+ + +++ L V L ID R + D + F+ Sbjct: 265 YTLIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFI 322 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D L + + V S++ G+ L + Sbjct: 323 LNAGRSLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 380 Query: 206 ILET 209 I E Sbjct: 381 IKEA 384 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|84999600|ref|XP_954521.1| GTP-binding protein [Theileria annulata] gi|65305519|emb|CAI73844.1| GTP-binding protein, putative [Theileria annulata] Length = 212 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 28/182 (15%) Query: 2 VSHTIFTK---SAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILV-------- 50 S T+F+K S I++ I P P+IAF G SNVGKSSLIN ++ Sbjct: 26 FSKTLFSKNVTSNPIYV--SETIDKAPLTKIPQIAFVGYSNVGKSSLINSILYGADIPLF 83 Query: 51 ------NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNV 104 N K L APGRT+HL F + ++LVD+PGYG A+ ++ Sbjct: 84 ARNIVSNSKMLKNPKFAPGRTRHLFTFDLGN---------NISLVDLPGYGCAKVSDVSL 134 Query: 105 DSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 +S L ++ L+D G + D ++S L++ + +Q+VLTK D+L Sbjct: 135 LINKSGRKLEMSGLCFLYRIFSLVDSIKGPVKEDFKLWSMLNEMEIPFQVVLTKCDRLKT 194 Query: 165 TT 166 T Sbjct: 195 TK 196 >gi|150016018|ref|YP_001308272.1| GTP-binding protein EngA [Clostridium beijerinckii NCIMB 8052] gi|189037141|sp|A6LSI6|DER_CLOB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|149902483|gb|ABR33316.1| small GTP-binding protein [Clostridium beijerinckii NCIMB 8052] Length = 438 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 13/174 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IA G+ NVGKSSLIN L+ + + S+ PG T+ S+L+ Sbjct: 173 DDEYIRIAMIGKPNVGKSSLINKLLGEERV-IVSDIPGTTRDSI------DSHLETEEGK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G K+ ++ + +I Y + L+ID G+ + D+ + + Sbjct: 226 FILVDTAGLRRKSKVKEEIERY-SVIRTY-AAIERADVCILMIDATEGITEQDEKIIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRK 197 + + +++ K D + +TL+K K +++ ++ E + S++ + Sbjct: 284 HELRKAIMVIVNKWDLVEKDD--KTLDKFKKDLQSNLKFLSYAEYLFISALTGQ 335 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 20/184 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K ++ + PG T+ + + + Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRISIVQDTPGVTRDRVY------AEAEWLRYNFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ N + + T + ++D + G+ D +V + L K Sbjct: 55 MIDTGGI----EPENNDIIIKQMRRQANIAIETADVIIFIVDGKEGLTAADNEVATMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D L Y + + S+ + G+ + ++ Sbjct: 111 SKKPVVLVVNKVDNLKDEN---------NAYEFYNLGIGDPMAISAGQGLGLGDMLDEVV 161 Query: 208 ETIN 211 + + Sbjct: 162 KHFD 165 >gi|317132122|ref|YP_004091436.1| ribosome-associated GTPase EngA [Ethanoligenens harbinense YUAN-3] gi|315470101|gb|ADU26705.1| ribosome-associated GTPase EngA [Ethanoligenens harbinense YUAN-3] Length = 441 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 71/179 (39%), Gaps = 13/179 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +A G+ N GKSSL+N + + + S+ PG T+ + ++N Sbjct: 173 EDEAVRVAVIGKPNAGKSSLVNRIAGEERM-LVSDIPGTTRDAV------DTRIENEYGT 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G ++ V+ + + R S ++ID G + D + + Sbjct: 226 FVFVDTAGIRRHSKVQEAVERYSVM--RAFSAVERADVCVMMIDATTGFTEQDSKIAGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVL 202 ++ + I + K D + T +T++ + + ++ ++ S+ + I+ L Sbjct: 284 HEQGKASIIAVNKWDLVEKTE--KTMDAFRKKLEQDFSFMSYAPILFLSAKTGRNIDKL 340 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 70/183 (38%), Gaps = 19/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N LV R+ ++ + PG T+ + P ++ Sbjct: 2 GRPIVAIVGRPNVGKSTLFNKLVGRR-ISIVEDTPGVTRDRI-YAPCEWCGH-----TFL 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L D G K + G+ + + T + + D R GV D ++ L + Sbjct: 55 LADTGGIEM----KSDDVFLSGIREQAKAAIDTADVIIFMTDLRSGVTAQDNEIADMLRR 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K D L T + + Y + P SSV G L ++ Sbjct: 111 SHRPVVLCVNKADTLGNTPS--------EVYEFYNLGLGDPFPVSSVHGHGTGDLLDHVV 162 Query: 208 ETI 210 E + Sbjct: 163 ELL 165 >gi|294012485|ref|YP_003545945.1| GTP-binding protein EngA [Sphingobium japonicum UT26S] gi|292675815|dbj|BAI97333.1| GTP-binding protein EngA [Sphingobium japonicum UT26S] Length = 456 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 20/183 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N LV +K LA + PG T+ + Sbjct: 2 LPTVAIVGRPNVGKSTLFNRLVGKK-LALVDDQPGVTRDRREGQANLLG------VDFTI 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D GY + G + ++ + ++D R G+ +D+++ +L + Sbjct: 55 IDTAGY----EDEDPQTLPGRMRMQTQAAVENADVALFVVDARAGITPLDEEIARWLREG 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ K E ++ + + +P S+ +G+ L +A+L Sbjct: 111 DAPVVLMANKA---------EGKAGDDGVMEAFSLGLGDPVPFSAEHGQGLADLFQALLP 161 Query: 209 TIN 211 I+ Sbjct: 162 YID 164 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 8/186 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ P ++A GR N GKS+LIN L+ L T G T+ + V +++ N Sbjct: 181 ESAPLKLAIVGRPNAGKSTLINRLLGENRL-LTGPEAGITRD-SIAVDWQWTDPDGNERP 238 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G + ++ + L+ + V LL+D G++ D + + Sbjct: 239 VRLIDTAGMRKRAKVQDKLEKLA--VSDGLNAVNFAEVVVLLLDSTRGLEAQDLRIADKV 296 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLR 203 ++ + + L K D + +A + K + + ++ S+ KG++ L Sbjct: 297 IEEGRALVVALNKWDTVENGSA--LYQGIKQALSDGLAQIRGVPIMTVSAATGKGLDDLI 354 Query: 204 KAILET 209 + ET Sbjct: 355 RVAFET 360 >gi|145637903|ref|ZP_01793547.1| GTP-binding protein EngA [Haemophilus influenzae PittHH] gi|145268903|gb|EDK08862.1| GTP-binding protein EngA [Haemophilus influenzae PittHH] Length = 503 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 66/184 (35%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 211 QDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQ 263 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G V+ + +++ L V L ID R + D + F+ Sbjct: 264 YTLIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFI 321 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D L + + V S++ G+ L + Sbjct: 322 LNAGRSLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 379 Query: 206 ILET 209 I E Sbjct: 380 IKEA 383 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKTTIVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|153001514|ref|YP_001367195.1| GTP-binding protein EngA [Shewanella baltica OS185] gi|160876250|ref|YP_001555566.1| GTP-binding protein EngA [Shewanella baltica OS195] gi|217972557|ref|YP_002357308.1| GTP-binding protein EngA [Shewanella baltica OS223] gi|304410031|ref|ZP_07391650.1| ribosome-associated GTPase EngA [Shewanella baltica OS183] gi|307302256|ref|ZP_07582014.1| ribosome-associated GTPase EngA [Shewanella baltica BA175] gi|166225855|sp|A6WQP3|DER_SHEB8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189037160|sp|A9KWW9|DER_SHEB9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783166|sp|B8E9T1|DER_SHEB2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|151366132|gb|ABS09132.1| small GTP-binding protein [Shewanella baltica OS185] gi|160861772|gb|ABX50306.1| small GTP-binding protein [Shewanella baltica OS195] gi|217497692|gb|ACK45885.1| small GTP-binding protein [Shewanella baltica OS223] gi|304351440|gb|EFM15839.1| ribosome-associated GTPase EngA [Shewanella baltica OS183] gi|306914294|gb|EFN44715.1| ribosome-associated GTPase EngA [Shewanella baltica BA175] gi|315268439|gb|ADT95292.1| ribosome-associated GTPase EngA [Shewanella baltica OS678] Length = 488 Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 71/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VFDEPGTTRDSIYI------PMEREGRE 247 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + ++ + +++ L V L+ID R G+ + D + F Sbjct: 248 YVIIDTAGVRRRSKVHQVIEKFS--VIKTLKAVEDANVVLLIIDAREGIAEQDLGLLGFA 305 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 306 LNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLFES 363 Query: 206 ILETIN 211 I E + Sbjct: 364 IEEAYD 369 Score = 95.2 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAFLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V + D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--KMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 EKTTFVVANKVDGID 124 >gi|301155940|emb|CBW15410.1| predicted GTP-binding protein [Haemophilus parainfluenzae T3T1] Length = 506 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 219 KIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDGQQYTLID 271 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 272 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 329 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 330 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 386 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHAN------ISGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLTAADIGIANYLRQRT 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKTTVVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|309972741|gb|ADO95942.1| GTP-binding protein EngA [Haemophilus influenzae R2846] Length = 504 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 66/184 (35%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 212 QDKNIKIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQ 264 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G V+ + +++ L V L ID R + D + F+ Sbjct: 265 YTLIDTAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFI 322 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D L + + V S++ G+ L + Sbjct: 323 LNAGRSLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 380 Query: 206 ILET 209 I E Sbjct: 381 IKEA 384 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|222479800|ref|YP_002566037.1| small GTP-binding protein [Halorubrum lacusprofundi ATCC 49239] gi|254783199|sp|B9LNM9|ENGB_HALLT RecName: Full=Probable GTP-binding protein EngB gi|222452702|gb|ACM56967.1| small GTP-binding protein [Halorubrum lacusprofundi ATCC 49239] Length = 206 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 29/197 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 E+ GRSNVGKS+L+ L T PG T+ N F D+++ + Sbjct: 6 PDRDAEVVLVGRSNVGKSTLMRELTGHD--FSTGGKPGVTRQPNHF---DWAS-----ES 55 Query: 86 MALVDMPGYGYAR-APKKNVDSWGGLIVRYLSERST--LRCVYLL-----IDC--RH--- 132 D+PG+G+ +++ ++ IVRYL E + L V ++ +D RH Sbjct: 56 FMFTDLPGFGFMSGVEEEHREAIKTNIVRYLEENADSILAGVVVMDGKAAVDIIDRHAER 115 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVI 189 G D ++F FL+ V + + K DK+ E L++ + YP ++ Sbjct: 116 GNIPHDVEMFGFLEDVGVEPIVAVNKTDKID--DLDERLDEICDRLGLYPPWQQWSDQIA 173 Query: 190 PTSSVKRKGIEVLRKAI 206 P + KR IE L + + Sbjct: 174 PICA-KRGDIEALEECL 189 >gi|71279565|ref|YP_270897.1| GTP-binding protein EngA [Colwellia psychrerythraea 34H] gi|123733686|sp|Q47WC5|DER_COLP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71145305|gb|AAZ25778.1| GTP-binding protein EngA [Colwellia psychrerythraea 34H] Length = 498 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 75/193 (38%), Gaps = 12/193 (6%) Query: 18 VPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 ++ P + ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 200 AKKLEDEPQENDKIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSVYI----- 253 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 ++ N L+D G + V+ + +++ L L+ID + G+ Sbjct: 254 -PMERNGREYTLIDTAGIRRRKNVTDVVEKYS--VIKTLRAIEDANVCLLIIDAQEGISD 310 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + F+ + S + + K D L KT+ R V S++ Sbjct: 311 QDLSLLGFILEAGRSLVLAVNKWDGLEDHEKDRI--KTELDRRLGFIDFARVHFISALHG 368 Query: 197 KGIEVLRKAILET 209 G+ L +++ E Sbjct: 369 TGVGHLYESVEEA 381 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 12/132 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTRSRD-ALVADYPGLTRDRQY------GQAEVEEHPFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G+ D + L K+ Sbjct: 55 IDTGGI-----NGDEQGIDVKMAEQSLMAIEEADAVLFLVDARDGLTAADHGIADHLRKQ 109 Query: 149 AVSYQIVLTKID 160 +V KID Sbjct: 110 NKKIFVVANKID 121 >gi|20808046|ref|NP_623217.1| GTP-binding protein EngA [Thermoanaerobacter tengcongensis MB4] gi|26006716|sp|Q8R9J1|DER_THETN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|20516626|gb|AAM24821.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4] Length = 439 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 76/196 (38%), Gaps = 19/196 (9%) Query: 21 IGLLPKAGP------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 I LP+ +IA GR NVGKSSL+N ++ + + S+ PG T+ Sbjct: 162 IKRLPENDVEYEEETIKIAVIGRPNVGKSSLVNRILGEERV-IVSDIPGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + L+D G ++++ + L R L+ L+ID G Sbjct: 216 -DTPFTKDGRNYILIDTAGIRRKSRISESIERYSVL--RALAAIERADICLLMIDATEGP 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + I++ K D + T +E E + + + ++ S Sbjct: 273 TEQDTKIAGYAFENGKGIIILVNKWDIVEKDSNTYKEYTEMIREKLA--FISFAPILFIS 330 Query: 193 SVKRKGIEVLRKAILE 208 + + I + + + + Sbjct: 331 AKTGQRIHKVLETVDK 346 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 72/179 (40%), Gaps = 19/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N ++ ++ ++ + PG T+ + N + LVD Sbjct: 6 VAIVGRPNVGKSTLFNRIL-KRRISIVEDIPGVTRDRIY------GNAEWLNRKFILVDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G PK + S L V E + L + ++D R G+ D+++ + L K Sbjct: 59 GGLDPD--PKDVIFSKVKLQVEAAIEAADL--ILFVVDAREGLVPEDEEIANMLRKTKKE 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D E + E IP S+ GI L +++ + Sbjct: 115 VILVCNKVDSFK--------EMPASFYDFFKLGLGEPIPISASNGLGIGELLDEVIKRL 165 >gi|126175188|ref|YP_001051337.1| GTP-binding protein EngA [Shewanella baltica OS155] gi|166225854|sp|A3D6V5|DER_SHEB5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|125998393|gb|ABN62468.1| small GTP-binding protein [Shewanella baltica OS155] Length = 488 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 71/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VFDEPGTTRDSIYI------PMEREGRE 247 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + ++ + +++ L V L+ID R G+ + D + F Sbjct: 248 YVIIDTAGVRRRSKVHQVIEKFS--VIKTLKAVEDANVVLLIIDAREGIAEQDLGLLGFA 305 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 306 LNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLFES 363 Query: 206 ILETIN 211 I E + Sbjct: 364 IEEAYD 369 Score = 95.2 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAFLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V + D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--KMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 EKTTFVVANKVDGID 124 >gi|297617642|ref|YP_003702801.1| ribosome-associated GTPase EngA [Syntrophothermus lipocalidus DSM 12680] gi|297145479|gb|ADI02236.1| ribosome-associated GTPase EngA [Syntrophothermus lipocalidus DSM 12680] Length = 442 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 24/201 (11%) Query: 21 IGLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 I LLP A E IA GR NVGKSSL+N L+ + + S PG T+ Sbjct: 161 IALLPPAEEEEKDELAVRIALVGRPNVGKSSLLNRLIGEERV-IVSEIPGTTRDAI---- 215 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + L+D G K+ + + L R L V +++D Sbjct: 216 --DTPFRYGGNRYVLIDTAGIRRKSRIKEPTERYSVL--RALRAVERSDVVLIILDATER 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPT 191 V + D+ + F+ + S I++ K D + T T+++ LIR A+ ++ Sbjct: 272 VTEQDKKIAGFVHEAGKSNIIIVNKWDLVKKTER--TMKEFDDLIREELKFLAYSPILYI 329 Query: 192 SSVKRKGIEVLRKAILETINY 212 S++ + + K ++E +++ Sbjct: 330 SALTGQRV----KQVIEVVDF 346 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 62/182 (34%), Gaps = 26/182 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N + + A + PG T+ + + +VD Sbjct: 6 VALVGRPNVGKSTLFNRMAGLRK-AIVEDTPGVTRDRIY------EQAEWAGREFIVVDT 58 Query: 92 PGYGYARA---PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G + + I + +++D R GV D+ V L + Sbjct: 59 GGIRFEEGDILAPEVKKQSELAIEE-------ADVIVMVVDAREGVTPEDEMVAGILRRA 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + K+ E +K + Y E IP S++ + L A++ Sbjct: 112 NKPVVLAANKV---------EDFKKHLGYLDFYRLGLGEPIPVSAIHGMNTDELLDAVIA 162 Query: 209 TI 210 + Sbjct: 163 LL 164 >gi|332140453|ref|YP_004426191.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] gi|332141960|ref|YP_004427698.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] gi|238693251|sp|B4RV85|DER_ALTMD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|327550475|gb|AEA97193.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] gi|327551982|gb|AEA98700.1| GTP-binding protein Der [Alteromonas macleodii str. 'Deep ecotype'] Length = 481 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ + L Sbjct: 193 PIKLAIVGKPNVGKSTLTNRILGEERVV-VYDMPGTTRDSVYI------PMERDEREYIL 245 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + IV+ L V L+ID R G+ D + F+ Sbjct: 246 IDTAGVRKRKKISEAVEKFS--IVKTLQAIEEANVVLLVIDAREGITDQDLSLLGFVLNS 303 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 S + + K D LS + + + + S++ G+ L +++ E Sbjct: 304 GRSLVVAVNKWDGLSTDIKDDIKREMDRRLG--FIDFARIHFISALHGSGVGNLFESVQE 361 Query: 209 T 209 Sbjct: 362 A 362 Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 61/176 (34%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L N ++ A ++ PG T+ + K + Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTNTRD-ALVADYPGLTRDRKY------GQAKFEKRQFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L V L+D R G+ DQ + L + Sbjct: 55 VDTGGI-----TGDEEGIDAEMAQQSLLAIEEADVVLFLVDARAGLLPADQGIADHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V K+D + + Y + ++ +G+ L + Sbjct: 110 NKQIFVVANKVDGIDGDS---------ESAEFYSLGLGAIKQIAAAHGRGVSQLLQ 156 >gi|116620165|ref|YP_822321.1| GTP-binding protein EngA [Candidatus Solibacter usitatus Ellin6076] gi|116223327|gb|ABJ82036.1| small GTP-binding protein [Candidatus Solibacter usitatus Ellin6076] Length = 441 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 67/184 (36%), Gaps = 10/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++A GR NVGKS+L+N L A S G T+ + ++ Sbjct: 178 EPKGIKVAIIGRPNVGKSTLLNALTGADR-AIVSPIAGTTRDAV------DETVSHDGQE 230 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G + ++ R V L++D GV +D + + Sbjct: 231 YVFVDTAGIRRKGKTHDMAEKLSVVMAR--RHIRMAHVVLLVLDATEGVVALDTTIAGYA 288 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVLRK 204 + + I + K D++ AQ+ E + + + + V+ S+ + L + Sbjct: 289 HEGGRAVIICVNKWDEVKGQAAQKKNEFEQQIRDEFKFLDYAPVVFLSAKSGSNVPKLFR 348 Query: 205 AILE 208 I E Sbjct: 349 LIKE 352 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 24/181 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N + ++ A + PG T+ +++ L+ Sbjct: 6 PTVVIVGRPNVGKSTLFNRITGQRR-AIVGDEPGITRDRLHGAA------EHDGRHFELI 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ + + L+D R + D+D+ L K Sbjct: 59 DTGGI----VVHDQEYIPAQILKQAEFALKAADHIIFLVDGRAEITGSDRDLAQMLKKLG 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + KID + + + N Y +V S+ G++ + + Sbjct: 115 KPVSLAVNKID-----------AQVRQDLVNEFYGLGIADVFAISAEHGTGVDAMLDRVT 163 Query: 208 E 208 E Sbjct: 164 E 164 >gi|325981901|ref|YP_004294303.1| ribosome-associated GTPase EngA [Nitrosomonas sp. AL212] gi|325531420|gb|ADZ26141.1| ribosome-associated GTPase EngA [Nitrosomonas sp. AL212] Length = 464 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+IA GR NVGKS+LIN L+ + + + PG T+ + + + L+ Sbjct: 175 PKIAIVGRPNVGKSTLINTLLGEERV-IAFDQPGTTRDSIY------VDFTHKDKQYTLI 227 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + ++ + + + L V L++D R+ + D + F+ + Sbjct: 228 DTAGLRRRGQVHETIEKFSAI--KTLQAIEDANVVVLILDARNEISDQDAHIAGFILETG 285 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + + ++ S++ G++ L +I Sbjct: 286 RALVIAINKWDGLDEYQRATIKSDLSRKLA--FLSFAQLHYISALHGTGMKKLLPSI 340 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N L ++ A ++ PG T+ ++ + +V Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTRTRD-AIVADIPGLTRDRHYGAGR------VGDKPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ K+ V + + + V ++D R G+ D+ + L K Sbjct: 56 DTGGFEP--VIKEGVLY--AMAKQTIQAIDEADKVLFIVDGRQGLTAHDKIIAEQLRKSG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ K E + T + + S++ I L Sbjct: 112 QKILLVVNKT---------EGMTTTVVTAEFFELGLGDPCAVSAMHGDNIHEL 155 >gi|238897953|ref|YP_002923633.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259645880|sp|C4K4J2|DER_HAMD5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|229465711|gb|ACQ67485.1| putative GTP-binding protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 496 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 11/187 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P++ P ++A GR NVGKS+L+N ++ + + + PG T+ + L N Sbjct: 205 PESLPIKLAIVGRPNVGKSTLVNHILAQDRM-LVYDIPGTTRDSIYI------PLIRNNR 257 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D G + K+ V+ + +++ L V L+ID GV D + SF Sbjct: 258 EYIFIDTAGVRKSAKIKEKVERFS--VIKTLKAIENANVVLLVIDANEGVSDQDLSLLSF 315 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + S I + K D +S ++ K +R S++ G+E L K Sbjct: 316 ILNSGRSLVITVNKWDAISSEKRKQI--KNSLDLRLGFMDFARTHFISALHGSGVENLFK 373 Query: 205 AILETIN 211 +I E + Sbjct: 374 SIKEAYD 380 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+ N L N A ++ PG T+ + + N K + Sbjct: 2 IPIIALIGRPNVGKSTFFNRLTQTAN-ALVADFPGLTRDRQ-YGHAEIENHK-----FII 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + + V ++D R G+ D ++ L K+ Sbjct: 55 IDTGGI---NGIEGIENIQKHMTHQSFLAIEEADVVLFILDARAGLLPADLEIAKHLRKR 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V KID ++ TA L Y A +V ++ +G+ L +++ Sbjct: 112 KKATFLVANKIDGMNSDTA---------LTDFYSLALGKVYGIAASHGRGVAQLMSSVI 161 >gi|146293744|ref|YP_001184168.1| GTP-binding protein EngA [Shewanella putrefaciens CN-32] gi|166225857|sp|A4Y8T6|DER_SHEPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145565434|gb|ABP76369.1| small GTP-binding protein [Shewanella putrefaciens CN-32] gi|319427118|gb|ADV55192.1| ribosome-associated GTPase EngA [Shewanella putrefaciens 200] Length = 488 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRDSIYI------PMEREGRE 247 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + ++ + +++ L V L+ID R GV + D + F Sbjct: 248 YVIIDTAGVRRRSKVHQVIEKFS--VIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFA 305 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 306 LNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLFES 363 Query: 206 ILETIN 211 I E + Sbjct: 364 IEEAYD 369 Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAFLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V + D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--KMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 EKTTFVVANKVDGID 124 >gi|296116360|ref|ZP_06834975.1| GTP-binding protein EngA [Gluconacetobacter hansenii ATCC 23769] gi|295977060|gb|EFG83823.1| GTP-binding protein EngA [Gluconacetobacter hansenii ATCC 23769] Length = 470 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 20/186 (10%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P + +GR NVGKS++ N LV R+ A ++ PG T+ + S Sbjct: 9 PGHDLPVVVIAGRPNVGKSTIFNRLVGRRQ-ALVADTPGVTRD------RKESETTVRGR 61 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + L+D G A +G + S + V +D R G+ D+ ++ Sbjct: 62 RIRLIDTAGLEEAAPDT----LFGRMRASSESAVAMADLVLFCVDARAGITPADEHFAAW 117 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L ++ ++ K E + + + + S+ +G+ L Sbjct: 118 LRRQGRPVLVLANKA---------EGRQGAAAAMEAFSLGLGAPLGISAEHGEGLADLMG 168 Query: 205 AILETI 210 I + I Sbjct: 169 EIADRI 174 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 9/189 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + E G + GP +A GR N GKS+L+N L+ + + T PG T+ + Sbjct: 188 VESEDEDGDVRPPGPLRLAIVGRPNAGKSTLLNRLLGEERM-ITGPEPGLTRDSVSVMLH 246 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + + LVD G + ++ + + V L +D GV Sbjct: 247 D------DEGPIQLVDTAGLRRKARIDETLEKMS--VSASIEALKMAEVVILALDATLGV 298 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + ++++ + L K D + + + + V+ S++ Sbjct: 299 HEQDLQIARLIEREGRCCVLALNKWDAVEDRNVTRQAIRDRIEMSLSQMRGIPVVAFSAL 358 Query: 195 KRKGIEVLR 203 G+ L Sbjct: 359 TGAGVNKLL 367 >gi|309775502|ref|ZP_07670502.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium 3_1_53] gi|308916596|gb|EFP62336.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium 3_1_53] Length = 263 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 76/182 (41%), Gaps = 9/182 (4%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + GR NVGKSSL+N ++N++ + SN G T+ + K ++D Sbjct: 3 KFCVIGRPNVGKSSLVNAVLNQERV-IVSNIEGTTRDAI------DTPFKREGKEYVVID 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++++ + L ERS V ++ID G+++ D+ V + + Sbjct: 56 TAGIRKRGKVYESIEKYSVLRAMSAIERSD--VVLVVIDGEKGIREQDKHVAGYAHEAGK 113 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 IV K D + + + + ++ ++ S++K++ I + I E Sbjct: 114 GVIIVYNKWDTVEKDEQTMHTIEKEIRAQFLYLSYAPILFVSALKKQRIHTILPVIDEVH 173 Query: 211 NY 212 +Y Sbjct: 174 DY 175 >gi|120598182|ref|YP_962756.1| GTP-binding protein EngA [Shewanella sp. W3-18-1] gi|166225859|sp|A1RHQ7|DER_SHESW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120558275|gb|ABM24202.1| small GTP-binding protein [Shewanella sp. W3-18-1] Length = 488 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 195 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRDSIYI------PMEREGRE 247 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + ++ + +++ L V L+ID R GV + D + F Sbjct: 248 YVIIDTAGVRRRSKVHQVIEKFS--VIKTLKAVEDANVVLLIIDAREGVAEQDLGLLGFA 305 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 306 LNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLFES 363 Query: 206 ILETIN 211 I E + Sbjct: 364 IEEAYD 369 Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAFLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V + D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--KMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 EKTTFVVANKVDGID 124 >gi|145631633|ref|ZP_01787398.1| GTP-binding protein EngA [Haemophilus influenzae R3021] gi|144982767|gb|EDJ90296.1| GTP-binding protein EngA [Haemophilus influenzae R3021] Length = 504 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 217 KIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQYTLID 269 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 270 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 327 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 328 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 384 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKTTIVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|261367335|ref|ZP_05980218.1| ribosome-associated GTPase EngA [Subdoligranulum variabile DSM 15176] gi|282570094|gb|EFB75629.1| ribosome-associated GTPase EngA [Subdoligranulum variabile DSM 15176] Length = 447 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 71/182 (39%), Gaps = 13/182 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 +A GR NVGKSSLIN ++ L +N G T+ + ++N Sbjct: 175 DDRITVAVIGRPNVGKSSLINHILGENRL-IVANEAGTTRDAI------DTLVENKYGKF 227 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G + V+ + L ERS R ++ID G + D V + Sbjct: 228 VFTDTAGLRKKGKVESGVERYSVLRSLAAVERS--RVCVIMIDATVGFTEQDSKVAGYAH 285 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRK 204 ++ + I + K D + + T++ + + ++ ++ S+ + ++ L + Sbjct: 286 EQGKACIIAVNKWDAVEKDSY--TMDAMRKQLEEDFSFMSYAPIVFISAKTGQRVDKLFE 343 Query: 205 AI 206 I Sbjct: 344 TI 345 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 68/186 (36%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L ++ LA + PG T+ F + + LV Sbjct: 4 PIVAIVGRPNVGKSTIFNKLTGQR-LAIVEDTPGVTRDRIF------CDCEWCGNKFLLV 56 Query: 90 DMPGYGYA---RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G + I + C+ ++ + +GV DQD+ L Sbjct: 57 DTGGIEPRIDDGLLAHMREQAQIAID-------SADCIIMVTELTNGVTPQDQDIAGMLM 109 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K DK+ L Y E+IP S V G L A+ Sbjct: 110 RSGKPVVLAVNKCDKIGEPPM--------ELYDFYSLGLGEIIPVSGVHGHGTGDLLDAV 161 Query: 207 LETINY 212 +++ Sbjct: 162 CAHLDF 167 >gi|288924558|ref|ZP_06418495.1| ribosome-associated GTPase EngA [Prevotella buccae D17] gi|315607420|ref|ZP_07882416.1| ribosome-associated GTPase EngA [Prevotella buccae ATCC 33574] gi|288338345|gb|EFC76694.1| ribosome-associated GTPase EngA [Prevotella buccae D17] gi|315250852|gb|EFU30845.1| ribosome-associated GTPase EngA [Prevotella buccae ATCC 33574] Length = 437 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P A GR NVGKSS+IN + + G T+ + F Sbjct: 172 EDDIPRFAVVGRPNVGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRYDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L+ID G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVSEDLEFYSVM--RSIRAIENSDVCILMIDATRGIETQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 K S +V+ K D + T Q+ ++ + IR P +I +S+V ++ I Sbjct: 283 QKNNKSLVVVVNKWDLVEDKT-QKVIDTFENAIRARMAPFVDFPIIFSSAVTKQRI 337 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 62/179 (34%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QSRRAIVSDTAGTTRDRQY------GKCQWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V L+D GV D+DV L + + Sbjct: 58 GG----WVVKSDDIFEDAIRRQVLVATEEADLVLFLVDVSTGVTDWDEDVAMILRRTKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y + S+ G L ILE + Sbjct: 114 VILVANKVD---------NSSEYYEAAEFYKLGLGDPHCISAATGGGTGDLLDLILEKM 163 >gi|119600058|gb|EAW79652.1| GTP-binding protein 8 (putative), isoform CRA_a [Homo sapiens] gi|119600060|gb|EAW79654.1| GTP-binding protein 8 (putative), isoform CRA_a [Homo sapiens] Length = 134 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 15/141 (10%) Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLL 127 +NFF +VDMPGYG+ RAP+ VD ++ YL ER L+ +LL Sbjct: 1 MNFFKVGKH---------FTVVDMPGYGF-RAPEDFVD----MVETYLKERRNLKRTFLL 46 Query: 128 IDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTT-AQETLEKTKYLIRNYPTAHP 186 +D G+++ D ++ A+ Y IVLTKIDK S ++ L+ K++ P Sbjct: 47 VDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQIQKFVNMKTQGCFP 106 Query: 187 EVIPTSSVKRKGIEVLRKAIL 207 ++ P S+V GI +LR I Sbjct: 107 QLFPVSAVTFSGIHLLRCFIA 127 >gi|325578764|ref|ZP_08148811.1| ribosome-associated GTPase EngA [Haemophilus parainfluenzae ATCC 33392] gi|325159588|gb|EGC71720.1| ribosome-associated GTPase EngA [Haemophilus parainfluenzae ATCC 33392] Length = 506 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 219 KIAIVGRPNVGKSTLTNRILGEDRVV-VYDMPGTTRDSIYI------PMERDGQQYTLID 271 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 272 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNTGR 329 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 330 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 386 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 71/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHAN------ISGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLTAADIGIANYLRQRT 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y ++ ++ + +G+ L + +L Sbjct: 112 NKTTVVVANKTDGIDADS---------HCAEFYQLGLGKIEQIAASQGRGVTQLMEQVL 161 >gi|145633562|ref|ZP_01789290.1| GTP-binding protein EngA [Haemophilus influenzae 3655] gi|144985768|gb|EDJ92382.1| GTP-binding protein EngA [Haemophilus influenzae 3655] Length = 504 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 217 KIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQYTLID 269 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 270 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 327 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 328 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 384 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + L+ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFILI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|218437880|ref|YP_002376209.1| GTP-binding protein EngA [Cyanothece sp. PCC 7424] gi|226741132|sp|B7KHD2|DER_CYAP7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218170608|gb|ACK69341.1| small GTP-binding protein [Cyanothece sp. PCC 7424] Length = 452 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 13/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + +P L + ++A GR NVGKSSL+N L A S G T+ Sbjct: 162 IIYLPTTESLSETNEIKVAIVGRPNVGKSSLLNALTGENR-AIVSPISGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 ++ N L+D G + + + + I R V +ID G+ Sbjct: 216 -DMVVQRNEQQYRLIDTAGIRRKKNVEYGAEFFS--INRAFKAIRRADVVLFVIDALDGI 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTS 192 D + + + + +V+ K D + + T+ + + ++ R Y E+I S Sbjct: 273 TDQDLKLAGRISDEGRATVLVINKWDAVDKDSY--TIYEYQKMLESRLYFMDWAEMIFVS 330 Query: 193 SVKRKGIEVLRKAILET 209 ++ K +E + + Sbjct: 331 ALTGKRVEKILDLVDNA 347 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 19/180 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L+N L + A + PG T+ + + Sbjct: 2 TLPIVAIIGRPNVGKSTLVNRLAGDQQ-AIVHDEPGITRD------RTYRPAFWQDRDFQ 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G + + + + + ++ + ++D + G D+++ ++L Sbjct: 55 VVDTGGLVF----DDDTEFLPLIREQAMTALAEAHAAIFVVDGQTGPTPADEEIANWLRS 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 ++V + + K + + Q + + E P SS+ G L ++ Sbjct: 111 QSVPIILAVNKCESVEQGLIQAS--------EFWQLGLGEPYPISSIHGSGTGELLDKLI 162 >gi|153953981|ref|YP_001394746.1| GTP-binding protein EngA [Clostridium kluyveri DSM 555] gi|219854595|ref|YP_002471717.1| hypothetical protein CKR_1252 [Clostridium kluyveri NBRC 12016] gi|189037142|sp|A5N7W7|DER_CLOK5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783148|sp|B9E1C8|DER_CLOK1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|146346862|gb|EDK33398.1| Hypothetical protein CKL_1356 [Clostridium kluyveri DSM 555] gi|219568319|dbj|BAH06303.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 438 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 9/186 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IAF G+ NVGKSSLIN L+ + + S+ PG T+ S L+ + Sbjct: 173 DSEYIKIAFIGKPNVGKSSLINKLLGEERV-IVSDIPGTTRDAI------DSYLETDEGK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+ ++ + + ER+ L++D H + + D+ + + Sbjct: 226 FLLIDTAGVRRKSKVKEEIEKYSVIRTYTAVERAD--VCILMLDATHDISEQDEKIIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + +V+ K D + T KT ++ + S+ + + + K Sbjct: 284 HELNKAIMVVINKWDLVDKDTKTVNKYKTSIGSSLSFMSYAPYLFISAKTGQRVNRIFKM 343 Query: 206 ILETIN 211 + E + Sbjct: 344 VRECYD 349 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 20/181 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K ++ + PG T+ + ++ N Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRISIVEDTPGVTRDR-VYAQAEWLNYN-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ N + + T + ++D R G+ D++V L K Sbjct: 55 IIDTGGI----EPENNDVIISKMRRQAQVAIETANVIIFIVDGREGLTAADKEVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID +++ Y+ Y E I S+ + G+ + ++ Sbjct: 111 SKKPIVLVVNKID---------NMKQENYIYEFYNLGIGEPISISASQGLGLGDMLDKLV 161 Query: 208 E 208 E Sbjct: 162 E 162 >gi|218288620|ref|ZP_03492897.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1] gi|218241277|gb|EED08452.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1] Length = 298 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A SN P T++ V M +D Sbjct: 8 VALIGRPNVGKSTLLNALVGQK-VAIMSNRPQTTRNRIRGVRT------TETSQMIFIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ L + + + L++D V ++++ L++ Sbjct: 61 PGIHKPK-----HRLGEYMVDAALKTLNEVDVIVLVVDASSPVHPTEEEIAKQLERVRTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + L K+D L L++ + P E +P S++K + +++L + I + Sbjct: 116 VILALNKVDALDDRAL--VLKRIEEYQALRP--FEEYVPISALKGEQVDLLAELIERRL 170 >gi|170760623|ref|YP_001787836.1| GTP-binding protein EngA [Clostridium botulinum A3 str. Loch Maree] gi|238688523|sp|B1KX71|DER_CLOBM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169407612|gb|ACA56023.1| ribosome-associated GTPase EngA [Clostridium botulinum A3 str. Loch Maree] Length = 439 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 15/169 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALVD 90 IAF G+ NVGKSSLIN L+ + L S+ PG T+ ++ +V +F L+D Sbjct: 179 IAFIGKPNVGKSSLINKLLGEERL-IVSDIPGTTRDSIDSYVDTEFGE-------FTLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K+ ++ + +I Y + L+ID G+ + DQ + + Sbjct: 231 TAGLRRKSKVKEEIERY-SVIRTY-ASIERADVCILMIDAIEGISEQDQKIIGYAHDINK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRK 197 + +++ K D + +T++K K ++ + P + + S+ + Sbjct: 289 AILVIVNKWDLVEKDD--KTMDKFKKELKVNLSFMPYAKYLFISAKTGQ 335 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + ++ N K Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVQDTPGVTRDRI-YAEAEWLNYK-----FT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + + L+D + G+ D++V L K Sbjct: 55 MIDTGGI----EPESEDIIVSQMRRQAQIAIEMANVIIFLVDGKEGLAPADEEVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KIDKL Y + + SS + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDKLKDEN---------NAYEFYNLGIGDPVTISSSQALGLGDMLDRVV 161 Query: 208 ET 209 E Sbjct: 162 EY 163 >gi|119505385|ref|ZP_01627459.1| predicted GTPase [marine gamma proteobacterium HTCC2080] gi|119458840|gb|EAW39941.1| predicted GTPase [marine gamma proteobacterium HTCC2080] Length = 472 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 82/212 (38%), Gaps = 25/212 (11%) Query: 8 TKSAWIFLRGVPEIGLLPKAGP--------PEIAFSGRSNVGKSSLINILVNRKNLARTS 59 + + V I LP+A P +A GR NVGKS+L+N L+ + Sbjct: 148 NRGVLQLITSV--IDALPQAAPADALNDPSIRVAVVGRPNVGKSTLVNRLLGEDRVV-VF 204 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 + PG T+ + + + A L+D G + ++ V+ + IV+ L + Sbjct: 205 DKPGTTRDSVYIRY------ERHDQAYTLIDTAGVRRRKNVREVVEKFS--IVKTLKAIN 256 Query: 120 TLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI- 178 V LL+D G+ + D + + + K D ++ + + + Sbjct: 257 EAHVVILLMDAHEGLVEQDLHLLGQCIDAGRGLVVAINKWDGIASDER----DWIRSELN 312 Query: 179 -RNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 R + +V S++ G+ L ++I + Sbjct: 313 RRLQFVDYADVHFISALHGTGVGHLYESIHQA 344 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 70/184 (38%), Gaps = 25/184 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A +N G T+ + K + Sbjct: 2 LPVIALVGRPNVGKSTLFNQLTRSRD-ALVANLSGLTRDRKY------GEGKIGDAPFIV 54 Query: 89 VDMPGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D G D I V LL+D R G+ D+ + S+L Sbjct: 55 IDTGGISGEELGIDAAMADQSRVAIDE-------ADIVLLLVDGRAGLHPGDESLVSYLR 107 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ + +V+ KID + A Y ++ ++ +G+ L ++ Sbjct: 108 QRSKPFHLVVNKIDGVGEDIAAS---------DFYRLGCSQLHTIAASHNRGVLQLITSV 158 Query: 207 LETI 210 ++ + Sbjct: 159 IDAL 162 >gi|18310737|ref|NP_562671.1| GTP-binding protein EngA [Clostridium perfringens str. 13] gi|110798819|ref|YP_696441.1| GTP-binding protein EngA [Clostridium perfringens ATCC 13124] gi|110803315|ref|YP_699041.1| GTP-binding protein EngA [Clostridium perfringens SM101] gi|168207282|ref|ZP_02633287.1| putative GTP-binding protein Era [Clostridium perfringens E str. JGS1987] gi|168210612|ref|ZP_02636237.1| putative GTP-binding protein Era [Clostridium perfringens B str. ATCC 3626] gi|168214232|ref|ZP_02639857.1| putative GTP-binding protein Era [Clostridium perfringens CPE str. F4969] gi|168217042|ref|ZP_02642667.1| putative GTP-binding protein Era [Clostridium perfringens NCTC 8239] gi|169342731|ref|ZP_02863772.1| putative GTP-binding protein Era [Clostridium perfringens C str. JGS1495] gi|182625851|ref|ZP_02953617.1| putative GTP-binding protein Era [Clostridium perfringens D str. JGS1721] gi|26006720|sp|Q8XJK1|DER_CLOPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123148666|sp|Q0TPJ9|DER_CLOP1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123341699|sp|Q0SS66|DER_CLOPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|18145418|dbj|BAB81461.1| probable GTP binding protein [Clostridium perfringens str. 13] gi|110673466|gb|ABG82453.1| ribosome-associated GTPase EngA [Clostridium perfringens ATCC 13124] gi|110683816|gb|ABG87186.1| ribosome-associated GTPase EngA [Clostridium perfringens SM101] gi|169299237|gb|EDS81307.1| putative GTP-binding protein Era [Clostridium perfringens C str. JGS1495] gi|170661368|gb|EDT14051.1| putative GTP-binding protein Era [Clostridium perfringens E str. JGS1987] gi|170711316|gb|EDT23498.1| putative GTP-binding protein Era [Clostridium perfringens B str. ATCC 3626] gi|170714259|gb|EDT26441.1| putative GTP-binding protein Era [Clostridium perfringens CPE str. F4969] gi|177908885|gb|EDT71377.1| putative GTP-binding protein Era [Clostridium perfringens D str. JGS1721] gi|182380862|gb|EDT78341.1| putative GTP-binding protein Era [Clostridium perfringens NCTC 8239] Length = 438 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 73/176 (41%), Gaps = 13/176 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSLIN L+ + + SN PG T+ S L+ LVD Sbjct: 179 IAMIGKPNVGKSSLINRLLGEERV-IVSNVPGTTRDSI------DSYLETEDGKFILVDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + +I Y + L+ID G+ + D+ + + + + Sbjct: 232 AGLRRKSKVKEEIERY-SVIRTY-AAIEKADVAILVIDAEQGITEQDEKIIGYAHEMNKA 289 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKA 205 +V+ K D + +TL + ++ P + + S++ + + + Sbjct: 290 IMVVVNKWDLIEKDD--KTLSNYQKDLQQKLKFMPYAKYLFISALTGQRVHKILST 343 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K ++ + PG T+ + ++ N K ++ Sbjct: 4 PIVAMVGRPNVGKSTLFNKLAG-KRISIVQDTPGVTRDR-VYAESEWLNRK-----FTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ + + + + ++D + G+ DQ+V L K Sbjct: 57 DTGGI----EPESSDIIVKQMRRQAQIAIEMADVIVFVVDGKEGLTAADQEVAQMLRKSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KID+L LE+ Y N P I S+ + G+ + +++ Sbjct: 113 KPVVLVVNKIDRL-------ALEENSYEFYNLGIGDP--ITISASQGLGLGDMLDEVVKY 163 Query: 210 IN 211 N Sbjct: 164 FN 165 >gi|270156684|ref|ZP_06185341.1| putative GTP-binding protein EngA [Legionella longbeachae D-4968] gi|289164869|ref|YP_003455007.1| GTPase involved in ribosome synthesis and maintenance [Legionella longbeachae NSW150] gi|269988709|gb|EEZ94963.1| putative GTP-binding protein EngA [Legionella longbeachae D-4968] gi|288858042|emb|CBJ11902.1| GTPase involved in ribosome synthesis and maintenance [Legionella longbeachae NSW150] Length = 466 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 15/194 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 VP+ + + +IAF+GR NVGKS+LIN ++ + + + PG T+ Sbjct: 163 VPQCEKVEEMHAIKIAFAGRPNVGKSTLINRILGEERVV-VYDMPGTTRDSIAI------ 215 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + L+D G + ++ + +++ L L+D G+ Sbjct: 216 PFARDNQQYVLIDTAGVRRKSRIDEKIEKFS--VIKTLKAIEESNVCLQLLDANEGITDQ 273 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVK 195 D ++ F+ + + I + K D L +E EK K + R + ++ S++ Sbjct: 274 DMNLLGFIIESGKALVIAVNKWDGLD----EEHKEKIKSELSRRLHFANFAKIRFISALH 329 Query: 196 RKGIEVLRKAILET 209 G+ L K I E Sbjct: 330 GSGVGNLFKDINEA 343 Score = 89.4 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 12/131 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNKLTKTQD-ALVADYPGLTRDRQYGQAQHDDKH------YIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G G ++ S I V L+D R G+ ID+ + + L K Sbjct: 55 VDTGGIGIDDIAVDSLMSKQSEI-----ALHEADIVLFLVDGRDGLTGIDEKIATNLRKL 109 Query: 149 AVSYQIVLTKI 159 +V+ K Sbjct: 110 NKKVHLVVNKT 120 >gi|30248179|ref|NP_840249.1| GTP-binding protein EngA [Nitrosomonas europaea ATCC 19718] gi|37999533|sp|Q82XU6|DER_NITEU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|30180064|emb|CAD84064.1| GTP-binding protein (HSR1-related):AAA ATPase superfamily [Nitrosomonas europaea ATCC 19718] Length = 467 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P IA +GR NVGKS+LIN L+ + + + PG T+ + + + + Sbjct: 175 QEKCPVIAIAGRPNVGKSTLINTLLGEERV-IAFDQPGTTRDSIY------VDFEYGQRS 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L++D H + D + F+ Sbjct: 228 YTLIDTAGLRRSGKVWETVEKFS--VVKTLQSIEAANVVILVLDAHHEISDQDAHIAGFI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + S + + K D L + + K ++ + + + S++ G++ L Sbjct: 286 LETGRSLVVAINKWDGLDDYQRE--IIKREFERKLGFLSFANLHYISALYGNGVKGL 340 Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 62/179 (34%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N L ++ A ++ PG T+ + + + + L +V Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTRSRD-AIVADIPGLTRD------RHYGHGRLGLKPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + L V ++D R G+ D+ + L K Sbjct: 56 DTGGFEPVVKSG----ILHAMAKQTLQAVDEADIVLFIVDGRQGLAAQDKIIAEQLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K E + + + S++ + L LE Sbjct: 112 QKIILVVNKT---------EGMPYSSVTAEFHELGLGTPCAVSALHGDHLGELIDFALE 161 >gi|221133872|ref|ZP_03560177.1| GTP-binding protein EngA [Glaciecola sp. HTCC2999] Length = 481 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ F ++ + Sbjct: 191 QNLPIKLAVVGKPNVGKSTLTNRILGEERVV-VYDQPGTTRDSIFI------PMERDERE 243 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G R + V+ + IV+ L V L+ID R G+ D + F+ Sbjct: 244 YILIDTAGVRKRRKINEAVEKFS--IVKTLQAIEEANVVLLVIDAREGISDQDLSLLGFI 301 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L E + + + S++ G+ L ++ Sbjct: 302 LNAGRSLVLAVNKWDGLQAHVKDEIKRELDRRLG--FVDFARLHFISALHGTGVGHLFES 359 Query: 206 ILET 209 + E Sbjct: 360 VQEA 363 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 63/176 (35%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L N ++ A ++ PG T+ + K + Sbjct: 2 LPVLALVGRPNVGKSTLFNRLTNTRD-ALVADFPGLTRDRKY------GQAKVEDRQFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D R G+ DQ + +L K+ Sbjct: 55 IDTGGI-----TGDEAGIDAAMAEQSLLAIDEADVVLFLVDARAGLTAADQGIAEYLRKQ 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + +V K+D + + Y V ++ +G+ L Sbjct: 110 EKTVYVVANKVDGIDGDS---------ESADFYALGMGNVQQIAAAHGRGVAQLLD 156 >gi|16330798|ref|NP_441526.1| GTP-binding protein EngA [Synechocystis sp. PCC 6803] gi|8928101|sp|P74120|DER_SYNY3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|1653291|dbj|BAA18206.1| slr1974 [Synechocystis sp. PCC 6803] Length = 452 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 15/188 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ ++A GR NVGKSSL+N L + A S G T+ ++ N Sbjct: 172 PEEDEIKVAIVGRPNVGKSSLLNALTGEQR-AIVSPISGTTRDAI------DMVVERNGQ 224 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + + +G I R V ++D GV + D + Sbjct: 225 KYRLIDTAGIRRKKNVDYGAEFFG--INRAFKAIRRADVVLFVLDVLDGVTEQDLKLAGR 282 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR- 203 + + + +V+ K D + + + + + R Y E+I S+ LR Sbjct: 283 IIEDGRAVVLVINKWDAVEKDSYTIYEHREQLMARLYFMDWAEMIFVSAQTG-----LRV 337 Query: 204 KAILETIN 211 + IL+ ++ Sbjct: 338 QKILDCVD 345 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 29/188 (15%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+ +N L + A + PG T+ + + Sbjct: 2 SLPIVAIIGRPNVGKSTFVNRLAGNQQ-AIVHDQPGITRD------RTYRPAFWRDRDFQ 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVF 142 +VD G + + + + E++ L + ++D + G D+++ Sbjct: 55 VVDTGGLVFNDDSEFLPE---------IREQANLALAEAKAAIFVVDGQQGPTASDEEIA 105 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +L +++V + + K + Q + E P S++ G L Sbjct: 106 QWLRQQSVPVILAVNKCESPDQGAIQAA--------EFWHLGLGEPYPMSAIHGSGTGDL 157 Query: 203 RKAILETI 210 A+LE + Sbjct: 158 LDALLEYL 165 >gi|262274783|ref|ZP_06052594.1| GTP-binding protein EngA [Grimontia hollisae CIP 101886] gi|262221346|gb|EEY72660.1| GTP-binding protein EngA [Grimontia hollisae CIP 101886] Length = 501 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + + GR NVGKS+L N ++ + + + PG T+ + ++ + + Sbjct: 210 PIKFSIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGREYVI 262 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V+ + +V+ L V L+ID R + D + F Sbjct: 263 IDTAGVRRRKRVNDKVEKFS--VVQTLKAIEDANVVLLVIDARENISDQDLSLLGFALNA 320 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 S I + K D L + + + + S++ G+ L ++I E Sbjct: 321 GRSIVIAVNKWDGLDSDVKERVKSELDRRLG--FVDFARIHFISALHGTGVGHLFESIQE 378 Query: 209 T 209 Sbjct: 379 A 379 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GKALLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ V++ + + L+ V ++D R G+ D+ + L + Sbjct: 55 VDTGGI---DGTEEGVET--KMAEQSLAAIEEADVVLFMVDGRAGLTVADEAIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ K+D + P A + E+ ++ +G+ L Sbjct: 110 QKKTFLVVNKVDGIDPDAASA---------EFWQLGMEEMYQIAAAHGRGVLAL 154 >gi|159028658|emb|CAO88129.1| engA [Microcystis aeruginosa PCC 7806] Length = 452 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 76/197 (38%), Gaps = 13/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ +P +P+ ++A GR NVGKSSL+N L ++ A S G T+ Sbjct: 162 IKYLPPGAEIPENEEIKVAIIGRPNVGKSSLLNALTGQQR-AIVSPISGTTRDSI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ L+D G + + + I R V +ID GV Sbjct: 216 -DTLIEREGQVYRLIDTAGIRRKKNVDYGAEFFS--INRAFKAIRRSDVVLFVIDVLDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + + ++ + +V+ K D + T R Y E+I S++ Sbjct: 273 TEQDLKLAGRIIEEGRAVVLVVNKWDAVEKDTYTINTYTKMLQDRLYFMDWAEMIFVSAM 332 Query: 195 KRKGIEVLRKAILETIN 211 + + ILE ++ Sbjct: 333 TGQRV----TKILELVD 345 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N + + A + PG T+ + + + Sbjct: 3 LPVVAIIGRPNVGKSTLVNRIAGDQQ-AIVFDQPGITRD------RTYQPAFWCDRDFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + L + ++D + G+ D+++ ++L ++ Sbjct: 56 VDTGGLVF----NDDSEFLPLIREQALIALAEASVAIFVVDGQAGITAGDREIAAWLRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + + Q T + A E P S++ G L A+++ Sbjct: 112 NVPILLAVNKCESVEQGILQAT--------EFWELAIGEPFPISAIHGSGTGELLDALIK 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|242398702|ref|YP_002994126.1| Probable GTP-binding protein [Thermococcus sibiricus MM 739] gi|242265095|gb|ACS89777.1| Probable GTP-binding protein [Thermococcus sibiricus MM 739] Length = 190 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 26/193 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L + + PG T+ ++ +VDM Sbjct: 2 IIFVGRSNVGKSTLIFRLTGK--YVKRGKRPGITRK----------PIEIGWRGKTIVDM 49 Query: 92 PGYGYAR-APKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-----------HGVKQID 138 PG+G+ PK + IV+++ + + L+ID + G ID Sbjct: 50 PGFGFMSGVPKYIQEKIKTEIVQFIENNADKIETAVLVIDGKSALEIIERWEKRGEIPID 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVI-PTSSVKRK 197 + F FL + + + + K+DK+ K+ + + ++ P S+ Sbjct: 110 VEFFQFLQELEIPIIVAVNKMDKIKNLNLTINRLIEKFGLLGTWEDYKDIFVPISAKFGT 169 Query: 198 GIEVLRKAILETI 210 I+ LRK I + I Sbjct: 170 NIQELRKLIEKNI 182 >gi|239997025|ref|ZP_04717549.1| GTP-binding protein EngA [Alteromonas macleodii ATCC 27126] Length = 481 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 73/181 (40%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ + L Sbjct: 193 PIKLAIVGKPNVGKSTLTNRILGEERVV-VFDMPGTTRDSVYI------PMERDEREYIL 245 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + IV+ L V L+ID R G+ D + F+ Sbjct: 246 IDTAGVRKRKKISEAVEKFS--IVKTLQAIEEANVVLLVIDAREGITDQDLSLLGFVLNS 303 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 S + + K D LS + + + + S++ G+ L +++ E Sbjct: 304 GRSLVVAVNKWDGLSTDVKDDIKREMDRRLG--FIDFARIHFISALHGSGVGNLFESVQE 361 Query: 209 T 209 Sbjct: 362 A 362 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L N ++ A ++ PG T+ + K + Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTNTRD-ALVADYPGLTRDRKY------GQAKFEKRQFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L V L+D R G+ DQ + L + Sbjct: 55 VDTGGI-----TGDEEGIDAEMAQQSLLAIEEADVVLFLVDARAGMLPADQGIADHLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V K+D + + Y ++ ++ +G+ L + Sbjct: 110 NKKVFVVANKVDGIDGDS---------ESAEFYSLGLGDIKQIAAAHGRGVSQLLQ 156 >gi|319898104|ref|YP_004136301.1| gtp-binding protein [Haemophilus influenzae F3031] gi|309750447|gb|ADO80431.1| GTP-binding protein EngA [Haemophilus influenzae R2866] gi|317433610|emb|CBY81994.1| predicted GTP-binding protein [Haemophilus influenzae F3031] Length = 504 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 217 KIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQYTLID 269 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 270 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 327 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 328 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 384 Score = 97.9 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKTTIVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|148380897|ref|YP_001255438.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 3502] gi|153932263|ref|YP_001385205.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 19397] gi|153936986|ref|YP_001388674.1| GTP-binding protein Era [Clostridium botulinum A str. Hall] gi|226741172|sp|A7FXK1|ERA_CLOB1 RecName: Full=GTPase Era gi|226741199|sp|A5I626|ERA_CLOBH RecName: Full=GTPase Era gi|148290381|emb|CAL84508.1| GTP-binding protein [Clostridium botulinum A str. ATCC 3502] gi|152928307|gb|ABS33807.1| GTP-binding protein Era [Clostridium botulinum A str. ATCC 19397] gi|152932900|gb|ABS38399.1| GTP-binding protein Era [Clostridium botulinum A str. Hall] Length = 296 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ K L+ S P T++ + + + + VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTE------DNYQLVFVDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ + V LI+ + D + L + V Sbjct: 60 PGIHKPK-----HKLGEYMVKSASEAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVKVP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + I Sbjct: 115 VFLVLNKIDENPQEKVAETLKTYSELME-----FEEIIPISALKGKNIDLLKELMFKYI 168 >gi|326560782|gb|EGE11149.1| GTP-binding protein EngA [Moraxella catarrhalis 103P14B1] gi|326563523|gb|EGE13782.1| GTP-binding protein EngA [Moraxella catarrhalis 12P80B1] Length = 472 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 20/186 (10%) Query: 26 KAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 PE +A GR NVGKS+L+N L+ + + PG T+ + Sbjct: 167 PEDMPEDELDGKALKLAIIGRPNVGKSTLVNRLLGEDRVV-VFDMPGTTRDSIYI----- 220 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + + L+D G + V+ + +V+ L V ++ID + G+ Sbjct: 221 -PFEREGRSYVLIDTAGVRRRGRIDEKVEKFS--VVKTLQAIKDANVVVVVIDAKEGIVD 277 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + + + + K D LS + P ++ S++ Sbjct: 278 QDLHMLGYALDAGRAIVVAINKWDGLSQDQKDSVKIEIDRRFNFVP--WVKIHLISALYG 335 Query: 197 KGIEVL 202 G+ L Sbjct: 336 NGVGKL 341 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 29/182 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + A ++ G T+ + + + +V Sbjct: 5 PVVALIGRPNVGKSTLFNQLT-KSRQALVADLAGLTRDRQY------GDAHFENKSFIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G G +D G I Y++ +S V ++D R G+ D ++ F Sbjct: 58 DTGGIG-------EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHF 110 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L +V K+D + E + E T++ +G+ L + Sbjct: 111 LHTLGKPVFLVANKMDGVHEAAYAE----------FFALGFGEPYATAASHGRGVTNLLE 160 Query: 205 AI 206 ++ Sbjct: 161 SL 162 >gi|319775992|ref|YP_004138480.1| GTP-binding protein [Haemophilus influenzae F3047] gi|329123858|ref|ZP_08252415.1| ribosome-associated GTPase EngA [Haemophilus aegyptius ATCC 11116] gi|317450583|emb|CBY86800.1| predicted GTP-binding protein [Haemophilus influenzae F3047] gi|327468821|gb|EGF14295.1| ribosome-associated GTPase EngA [Haemophilus aegyptius ATCC 11116] Length = 504 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 217 KIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQYTLID 269 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 270 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 327 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 328 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 384 Score = 97.9 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKTTIVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|315123111|ref|YP_004065117.1| GTP-binding protein EngA [Pseudoalteromonas sp. SM9913] gi|315016872|gb|ADT70209.1| GTP-binding protein EngA [Pseudoalteromonas sp. SM9913] Length = 489 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 11/183 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P ++A GR NVGKS+L N ++ + + PG T+ + + N Sbjct: 199 DKPVKLAIIGRPNVGKSTLTNRILGEDRV-IVYDMPGTTRDSIYI------PMTRNDKEY 251 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + V+ + +++ L V L++D R G+ D + F Sbjct: 252 ILIDTAGVRKRKKVSDVVEKFS--VIKTLQAIEDCNVVLLVVDARDGISDQDLSLLGFAL 309 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S I + K D L KT+ R + S++ G+ L +++ Sbjct: 310 NSGRSLVIAVNKWDGLDNYVKDRI--KTELDRRLGFIDFARLHFISALHGTGVGHLFESV 367 Query: 207 LET 209 E Sbjct: 368 DEA 370 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 LPVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQAN------YDGFEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L V L+D R G+ DQ + + L K+ Sbjct: 55 VDTGGI---DGSEEGIET--EMADQSLLAIEEADIVLFLVDARVGMTVADQAIANHLRKQ 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V K D + + Y + EV ++ +GI +L + Sbjct: 110 EKKCFVVANKTDGIDADS---------NCAEFYQLSLGEVHHIAAAHGRGITLLLE 156 >gi|229845438|ref|ZP_04465568.1| GTP-binding protein EngA [Haemophilus influenzae 6P18H1] gi|229811634|gb|EEP47333.1| GTP-binding protein EngA [Haemophilus influenzae 6P18H1] Length = 504 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 217 KIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQYTLID 269 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 270 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 327 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 328 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 384 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|145641461|ref|ZP_01797039.1| GTP-binding protein EngA [Haemophilus influenzae R3021] gi|145273752|gb|EDK13620.1| GTP-binding protein EngA [Haemophilus influenzae 22.4-21] Length = 504 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 217 KIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQYTLID 269 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 270 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 327 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 328 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 384 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTVADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKTTIVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|293373216|ref|ZP_06619578.1| small GTP-binding protein domain protein [Bacteroides ovatus SD CMC 3f] gi|292631864|gb|EFF50480.1| small GTP-binding protein domain protein [Bacteroides ovatus SD CMC 3f] Length = 395 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 77/192 (40%), Gaps = 25/192 (13%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P A IAF GR N GKSSLIN L + + A S+ PG T L + Sbjct: 2 SLTDTPSASRLHIAFFGRRNSGKSSLINALTGQ-DTALVSDTPGTTTDL----VSKAMEI 56 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK-QID 138 + P + +D PG+ + I R L LL G + Sbjct: 57 QGIGPCL-FIDTPGFDDEGELGELR------ISRTLKAIEKTDIALLLC----GDTFSHE 105 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 +++ + L +K + VL KID +E + I P + S+ ++ G Sbjct: 106 KEMLALLKEKNIPVIPVLNKID------IRENSDSLATYIEEECKIRP--LLISAKEKTG 157 Query: 199 IEVLRKAILETI 210 IE +R+AILE + Sbjct: 158 IEQIRQAILEKL 169 >gi|261252182|ref|ZP_05944755.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891] gi|260935573|gb|EEX91562.1| GTP-binding protein EngA [Vibrio orientalis CIP 102891] Length = 495 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 203 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 255 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L+ID R + D + F Sbjct: 256 YVLIDTAGVRRRKRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 313 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 314 LNAGRSIVLAVNKWDGLDTDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 371 Query: 206 ILET 209 + E Sbjct: 372 VQEA 375 Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D + + L K Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFMVDGRAGLTPSDIAISNHLRKI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + A + + ++ +G+ L I Sbjct: 110 EKPSMLVVNKVDGIDADAASA---------DFWQLGVENMYQIAAAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|254490819|ref|ZP_05104002.1| GTP-binding protein Era [Methylophaga thiooxidans DMS010] gi|224463991|gb|EEF80257.1| GTP-binding protein Era [Methylophaga thiooxydans DMS010] Length = 301 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 17/180 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN ++ +K L TS P T+H + N+ VD Sbjct: 11 VAIIGRPNVGKSTLINRILGQK-LCITSRRPQTTRHRILGI------KTNDSGQFIYVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV- 150 PG + S + + +++ D+ V L + A Sbjct: 64 PGMH----SDNKKAMNRYMNRAAASSIEDVDVILFVVEG-LKWTDEDKRVLKRLQQDARC 118 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL K DKL A L + + L + A V+P S+ K ++L + I + + Sbjct: 119 PVILVLNKADKLDDKAA--LLPQIQELAAQFDFAA--VVPVSARKGMNTDLLEQEIAKLM 174 >gi|239815182|ref|YP_002944092.1| GTP-binding protein EngA [Variovorax paradoxus S110] gi|259645888|sp|C5CXH0|DER_VARPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|239801759|gb|ACS18826.1| small GTP-binding protein [Variovorax paradoxus S110] Length = 447 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 11/183 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P ++A +GR NVGKS+LIN + + L + PG T+ + N Sbjct: 178 NKPIKLAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRDAI------SVPFERNGQRF 230 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ + +V+ L + V LL+D GV D + ++ Sbjct: 231 ELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIESASVVLLLLDATQGVTDQDAHIAGYIL 288 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + I + K D + ++ + + + + S++KR+G+ + +AI Sbjct: 289 ESGRAVVIAINKWDAVDSYQREQIQRQIETRLP--FLKFASLHFISAIKRQGLGPVWQAI 346 Query: 207 LET 209 + Sbjct: 347 AQA 349 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ G T+ + + N + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTQTRD-AIVADFAGLTRD------RHYGNGRLGKHEFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + + + V ++D R G+ D D+ + L + Sbjct: 56 DTGGFEPDAGSG----IYKEMAKQTRQAVAEADVVIFVVDAREGLSAQDHDIANELRRLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + K E + L+ Y +V S+ +G+ L + L Sbjct: 112 KPCVLAANKA---------EGMHDGTKLVDFYELGFGDVHGVSAAHGQGMRDLVELALAP 162 Query: 210 IN 211 +N Sbjct: 163 LN 164 >gi|254283197|ref|ZP_04958165.1| GTP-binding protein EngA [gamma proteobacterium NOR51-B] gi|219679400|gb|EED35749.1| GTP-binding protein EngA [gamma proteobacterium NOR51-B] Length = 472 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 11/176 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 G +A GR NVGKS+LIN L+ + + PG T+ + + + A Sbjct: 173 DGGIRVAAIGRPNVGKSTLINRLLGDDRVV-VFDEPGTTRDSIYI------DFERRGQAY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ V+ + IV+ L + V LL+D GV + D + Sbjct: 226 TLIDTAGVRRRKNVRETVEKFS--IVKTLKAIADAHVVILLMDAHEGVVEQDLHLLGQCI 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 I + K D + P + + ++ + ++ S++ G+ L Sbjct: 284 DAGRGLVIAVNKWDGVDPDERDWIRSELQRRLQ--FVDYADIHFISALHGTGVGHL 337 Score = 95.2 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 25/181 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A +N G T+ + + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNQLTRTRD-ALVANLSGLTRDRQY------GDGKVGAVPYIV 54 Query: 89 VDMPGYGY--ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D G + I V L++D R G++ D+ + S+L Sbjct: 55 IDTGGISGDESGIDAAMAGQSQTAIEE-------ADIVLLMVDGRAGIQAGDEALVSYLR 107 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +K+ + +V+ KID + A L Y + ++ +GI + +++ Sbjct: 108 RKSKPFHLVINKIDGVGEEAA---------LSDFYGFGIDGMHAIAASHNRGISSMMQSV 158 Query: 207 L 207 L Sbjct: 159 L 159 >gi|209545222|ref|YP_002277451.1| GTP-binding protein EngA [Gluconacetobacter diazotrophicus PAl 5] gi|209532899|gb|ACI52836.1| small GTP-binding protein [Gluconacetobacter diazotrophicus PAl 5] Length = 479 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 20/184 (10%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P + +GR NVGKS+L N LV R+ A ++ PG T+ + + + Sbjct: 11 DDLPVVVIAGRPNVGKSTLFNRLVGRRQ-ALVADTPGVTRD------RKEAETVMRGRRV 63 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G A A +G + S + V ID R G+ D+ ++L Sbjct: 64 RLVDTAGLEEAAADT----LYGRMRASSESAVAQADLVLFCIDTRAGITPADEHFAAWLR 119 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ ++ K E + + + + S+ +G+ L I Sbjct: 120 RQGRPVLLIANKA---------EGRQGAAAAMEAFALGLGTPLAISAEHGEGLSDLMGEI 170 Query: 207 LETI 210 + + Sbjct: 171 ADRL 174 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 9/178 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 GP +A GR N GKS+L+N L+ + + T PG T+ + D Sbjct: 207 PVGPLRLAIVGRPNAGKSTLLNRLLGEERM-ITGPEPGLTRDSVTVLLHDEHG------P 259 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + LVD G +++++ + + V L +D GV + D + + Sbjct: 260 IQLVDTAGLRRRARIEESLEKMS--VSATIEALKMAEVVVLTLDATLGVHEQDLQIARLI 317 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +++ + L K D + A + V+ S++ G+ L Sbjct: 318 EREGRCCVLALNKWDAVEDRIATRQAISDRIETSLAQMRGIPVVSFSALTGAGVNKLL 375 >gi|162149029|ref|YP_001603490.1| GTP-binding protein EngA [Gluconacetobacter diazotrophicus PAl 5] gi|161787606|emb|CAP57202.1| GTP-binding protein [Gluconacetobacter diazotrophicus PAl 5] Length = 479 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 20/184 (10%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P + +GR NVGKS+L N LV R+ A ++ PG T+ + + + Sbjct: 11 DDLPVVVIAGRPNVGKSTLFNRLVGRRQ-ALVADTPGVTRD------RKEAETVMRGRRV 63 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G A A +G + S + V ID R G+ D+ ++L Sbjct: 64 RLVDTAGLEEAAADT----LYGRMRASSESAVAQADLVLFCIDTRAGITPADEHFAAWLR 119 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ ++ K E + + + + S+ +G+ L I Sbjct: 120 RQGRPVLLIANKA---------EGRQGAAAAMEAFALGLGTPLAISAEHGEGLSDLMGEI 170 Query: 207 LETI 210 + + Sbjct: 171 ADRL 174 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 65/178 (36%), Gaps = 9/178 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 GP +A GR N GKS+L+N L+ + + T PG T+ + D Sbjct: 207 PVGPLRLAIVGRPNAGKSTLLNRLLGEERM-ITGPEPGLTRDSVTVLLHDEHG------P 259 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + LVD G +++++ + + V L +D GV + D + + Sbjct: 260 IQLVDTAGLRRRGRIEESLEKMS--VSATIEALKMAEVVVLTLDATLGVHEQDLQIARLI 317 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +++ + L K D + A + V+ S++ G+ L Sbjct: 318 EREGRCCVLALNKWDAVEDRIATRQAISDRIETSLAQMRGIPVVSFSALTGAGVNKLL 375 >gi|16272103|ref|NP_438305.1| GTP-binding protein EngA [Haemophilus influenzae Rd KW20] gi|68248744|ref|YP_247856.1| GTP-binding protein EngA [Haemophilus influenzae 86-028NP] gi|260581297|ref|ZP_05849114.1| ribosome-associated GTPase EngA [Haemophilus influenzae RdAW] gi|1175159|sp|P44536|DER_HAEIN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|1573089|gb|AAC21807.1| GTP-binding protein [Haemophilus influenzae Rd KW20] gi|68056943|gb|AAX87196.1| GTP-binding protein EngA [Haemophilus influenzae 86-028NP] gi|260092046|gb|EEW75992.1| ribosome-associated GTPase EngA [Haemophilus influenzae RdAW] Length = 504 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 217 KIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQYTLID 269 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 270 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 327 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 328 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 384 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|312884308|ref|ZP_07744017.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122] gi|309368081|gb|EFP95624.1| GTP-binding protein EngA [Vibrio caribbenthicus ATCC BAA-2122] Length = 495 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 203 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 255 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +V+ L V L+ID R + D + F Sbjct: 256 YVLIDTAGVRRRKRINETVEKFS--VVKTLKAIEDANVVLLVIDARENISDQDLSLLGFA 313 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + ++ + + S++ G+ L ++ Sbjct: 314 LNAGRSIVLAVNKWDGLDMDVKEHVKKELDRRLG--FVDFARLHFISALHGTGVGHLFES 371 Query: 206 ILET 209 + E Sbjct: 372 VQEA 375 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRSRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D + + L K Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIDEADVVLFMVDGRAGLTPADIAISNHLRKL 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 A +V+ K+D + A + ++ ++ +G+ L I Sbjct: 110 AKPSMLVVNKVDGIDADAASA---------DFWQLGVDDMYQIAAAHGRGVGAL---IDR 157 Query: 209 TIN 211 +N Sbjct: 158 ALN 160 >gi|163782078|ref|ZP_02177077.1| GTP-binding protein Era [Hydrogenivirga sp. 128-5-R1-1] gi|159882610|gb|EDP76115.1| GTP-binding protein Era [Hydrogenivirga sp. 128-5-R1-1] Length = 304 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 15/182 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + G+ NVGKS+L+N ++ RK ++ + PG T+ V + + +D Sbjct: 6 VTIVGKPNVGKSTLLNNILGRK-VSIVTPKPGTTRIRVLGVKN-----ISGEAQIIFLDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS-FLDKKA- 149 PG + S + + L + +ID G ++ D++VF ++ A Sbjct: 60 PGIYQPKGADVLGKSMLQMARQSL---EDADVILFMIDAEEGWRKRDEEVFQSYVKPYAE 116 Query: 150 -VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ KIDKL A+ L + + + +P E++PTS++K +E L K +L+ Sbjct: 117 QKPVILVVNKIDKL--GAAKNVLPLIEEIHKKHPE-FKEIVPTSALKGANLEELEKTLLK 173 Query: 209 TI 210 + Sbjct: 174 YL 175 >gi|145640014|ref|ZP_01795612.1| GTP-binding protein EngA [Haemophilus influenzae PittII] gi|145270901|gb|EDK10820.1| GTP-binding protein EngA [Haemophilus influenzae PittII] Length = 504 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 217 KIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQYTLID 269 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 270 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 327 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 328 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 384 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTVADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKTTIVVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|148825596|ref|YP_001290349.1| GTP-binding protein EngA [Haemophilus influenzae PittEE] gi|229847254|ref|ZP_04467357.1| GTP-binding protein EngA [Haemophilus influenzae 7P49H1] gi|148715756|gb|ABQ97966.1| GTP-binding protein EngA [Haemophilus influenzae PittEE] gi|229809797|gb|EEP45520.1| GTP-binding protein EngA [Haemophilus influenzae 7P49H1] Length = 504 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 217 KIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQYTLID 269 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 270 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 327 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 328 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 384 Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVLVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|238924644|ref|YP_002938160.1| GTP-binding protein EngA [Eubacterium rectale ATCC 33656] gi|259645876|sp|C4ZD63|DER_EUBR3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238876319|gb|ACR76026.1| GTP-binding protein EngA [Eubacterium rectale ATCC 33656] gi|291525305|emb|CBK90892.1| ribosome-associated GTPase EngA [Eubacterium rectale DSM 17629] gi|291529236|emb|CBK94822.1| ribosome-associated GTPase EngA [Eubacterium rectale M104/1] Length = 441 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A G+ NVGKSSLIN L R++ S+ G T+ + +K + Sbjct: 174 EDDRPRVAIVGKPNVGKSSLINKLA-REDRVIVSDIAGTTRDAI------DTAIKYDGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K++++ + I+R +S V ++ID GV + D + Sbjct: 227 YIFIDTAGLRRKNKIKEDIERYS--IIRAVSAVERADVVIVVIDATEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ I + K D + T ++ EK + ++ P A E++ S+ + + + Sbjct: 285 HERGKGIIIAVNKWDAIEKDNNTVKQHTEKIRQILSFIPYA--EILFISAKSGQRLNKIF 342 Query: 204 KAI 206 + I Sbjct: 343 ELI 345 Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 19/182 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L N L + ++ + PG T+ + +++ Sbjct: 2 SRPVVAIVGRPNVGKSTLFNALAGER-ISIVKDTPGVTRDRIY------ADVSWLDYNFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + T + + D + G+ D V L + Sbjct: 55 MIDTGGI----EPESGDVILSQMREQAQIAIDTADVIIFITDVKQGLVDSDSKVADMLRR 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D + Y + P S+ G+ + ++ Sbjct: 111 SHKPVVLVVNKVDSFEK--------YMTDVYEFYNLGIGDPHPISAASMLGLGDMLDEVV 162 Query: 208 ET 209 + Sbjct: 163 KH 164 >gi|86158079|ref|YP_464864.1| GTP-binding protein EngA [Anaeromyxobacter dehalogenans 2CP-C] gi|85774590|gb|ABC81427.1| small GTP-binding protein [Anaeromyxobacter dehalogenans 2CP-C] Length = 465 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 28/184 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L R+ +A + PG T+ N+ +++ A+++ Sbjct: 5 RPVVALVGRPNVGKSTLFNRLAGRR-VAIVEDVPGVTRDRNY------ADVIWEGRAVSV 57 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR-----CVYLLIDCRHGVKQIDQDVFS 143 VD G+ +S L+ + + E++ L V L++D R G+ +D+ V Sbjct: 58 VDTGGFEP--------ESRDRLMSQ-VREQAQLAVDEASVVVLVVDGRDGLTSLDRAVAE 108 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + + + K+D E+ L Y EV S+ +G+ L Sbjct: 109 LLRRAGKPLFVAVNKVD-------TARTEEDVPLAEFYGLGFGEVHALSAEHGRGVSGLV 161 Query: 204 KAIL 207 AI+ Sbjct: 162 DAIV 165 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 9/180 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 G +A GR NVGKS+ +N L+ + S+ PG T+ S + + Sbjct: 192 PVGDIRLAIVGRPNVGKSTFVNALLGEERFV-VSDVPGTTRDAI------DSLVAHKGRR 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + D G R+ + V+S+ +VR + V L+D + D + + Sbjct: 245 FVVTDTAGIRRKRSIAQKVESFS--VVRAMKAMDQAEVVACLLDATEAGVEQDARLLGLV 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K + IV+ K D A + + + R A ++ S+ +R+G+ + + Sbjct: 303 AEKGKALVIVVNKWDIAEREGATQDWYRKELTKRLPFVAFAPMLFVSAKERRGVHRVLEK 362 >gi|226946062|ref|YP_002801135.1| GTP-binding protein EngA [Azotobacter vinelandii DJ] gi|259645867|sp|C1DE52|DER_AZOVD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226720989|gb|ACO80160.1| Small GTP-binding protein EngA [Azotobacter vinelandii DJ] Length = 491 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + G T+ + + + Sbjct: 192 EKDGIKIAIIGRPNVGKSTLVNRMLGEERV-IVYDQAGTTRDSIYI------PFERDEDK 244 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV + D ++ F+ Sbjct: 245 YTLIDTAGVRRRGKIFEAVEKFS--VVKTLQAIQDANVVIFVMDAREGVVEHDLNLLGFV 302 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + P K + R ++ S++ G+ L Sbjct: 303 LETGRALVIALNKWDGMEPGQRDYV--KIELERRLMFADFADIHFISALHGTGVGHL 357 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 69/177 (38%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A + G T+ + K + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLTKTRD-AIVAEYAGLTRDRQY------GEAKWQGRTYIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ +D+ + + L V ++D R G+ DQ + L K+ Sbjct: 55 IDTGGI---SGDEEGIDA--KMAEQSLQAIEEADAVLFMVDSRAGMTAADQLIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K+D + P A+ P + +P ++ +GI + +A Sbjct: 110 NKRSFLVANKVDTVDPDIARAEFS---------PLGLGDALPIAAAHGRGINAMLEA 157 >gi|56461130|ref|YP_156411.1| GTP-binding protein EngA [Idiomarina loihiensis L2TR] gi|81821723|sp|Q5QYB3|DER_IDILO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|56180140|gb|AAV82862.1| GTPase EngA [Idiomarina loihiensis L2TR] Length = 479 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 72/181 (39%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+LIN ++ + + + PG T+ + ++ N L Sbjct: 191 PLKLAIVGRPNVGKSTLINRILGEERVV-VYDMPGTTRDSVYI------PMQRNEREYVL 243 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L V +++D R + D ++ F Sbjct: 244 IDTAGVRRRGRIGEAIEKFS--VVKTLQAIEDANVVLIVVDARETISDQDLNLIGFALNA 301 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 S I + K D L +E + + + S++ G+ L +++ E Sbjct: 302 GRSIVIAVNKWDGLQNDHKEEIKRELDRRLG--FVDFARLHFISALHGTGVGHLFESVEE 359 Query: 209 T 209 Sbjct: 360 A 360 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 67/182 (36%), Gaps = 21/182 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQAN------YDGYQFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V ++D R GV DQ + L K+ Sbjct: 55 IDTGGIHGDEEGIDE-----EMAKQSLLAVDEADVVLFMVDARDGVTVGDQAIADHLRKQ 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V KID ++ + Y + E+ ++ +G+E L + + Sbjct: 110 NKKVYLVCNKID---------GIDAHSAMADFYSLSLGELYGIAAAHGRGVEQLLEICFK 160 Query: 209 TI 210 I Sbjct: 161 PI 162 >gi|257052181|ref|YP_003130014.1| GTP-binding protein [Halorhabdus utahensis DSM 12940] gi|256690944|gb|ACV11281.1| small GTP-binding protein [Halorhabdus utahensis DSM 12940] Length = 205 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 29/202 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 E+ +GRSNVGKS+L+ L T PG TQ N + D+++ Sbjct: 6 PDRSAEVVLAGRSNVGKSTLMRELTGH--TFDTGQRPGVTQEPNHY---DWTS-----ED 55 Query: 86 MALVDMPGYGYAR-APKKNVDSWGGLIVRYLSERST--LRCVYL-----LIDC--RH-GV 134 L D+PG+GY + P + + +VRY+ + L V + +ID RH G Sbjct: 56 FVLTDLPGFGYMKGVPDEVREQIKTDVVRYIEANADSILVGVLVVDGKSVIDIIDRHSGP 115 Query: 135 KQI--DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVI 189 +I D ++F FL + + + K+DK+ E L + + +P + Sbjct: 116 DEIPHDVELFHFLRDVGIPPVVAVNKMDKVD--DRDERLNELCDRLGLHPPWKQWQGTIA 173 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 P ++ + I+ L +A+ + ++ Sbjct: 174 PITAKRGS-IDPLTEAVRDHLH 194 >gi|212550485|ref|YP_002308802.1| GTP-binding protein EngA [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|229710725|sp|B6YQB9|DER_AZOPC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|212548723|dbj|BAG83391.1| GTP-binding protein EngA [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 437 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 12/188 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 ++ P+ P IA G+ NVGKSSLIN L N + +N G T+ + + F Sbjct: 166 KVDNKPEITIPAIAIVGKPNVGKSSLINALTNEERN-IVTNIAGTTRDSIYTLYDKFGL- 223 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 LVD G + ++N + + I+R + + LLID + D Sbjct: 224 -----KFYLVDTAGICKKKKVEENSEYYS--IIRAIRSIESSDICILLIDATQCIMAQDI 276 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRK 197 ++FS + K IV+ K D + +T+ + IR P +I +S+ +K Sbjct: 277 NIFSIIQKNEKGLIIVVNKWDLI-QNKNPKTIYTFENAIRQRTAPFTDVPIIFSSAQTKK 335 Query: 198 GIEVLRKA 205 I + + Sbjct: 336 RIYKILQV 343 Score = 87.9 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 26/179 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + + A G T+ + + + +++D Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QSHQAIVDEEEGTTRDRQYSKVEWCGQI------FSIIDT 57 Query: 92 PGYGYARA---PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G+ ++ I + L+D HG +DQ + + L ++ Sbjct: 58 GGWVLNSDDIFEEEINKQVQIAIEE-------ADIILFLVDVIHGTTDLDQQIAALLRRE 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + Y + S++ G L ++ Sbjct: 111 KKLVILVSNKAD---------NYKLYAQSAEFYALGLGDPYNVSAINGSGTGELLDYLI 160 >gi|78484970|ref|YP_390895.1| small GTP-binding protein domain-containing protein [Thiomicrospira crunogena XCL-2] gi|78363256|gb|ABB41221.1| GTP-binding protein [Thiomicrospira crunogena XCL-2] Length = 480 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 23 LLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 L K +A GR NVGKS+LIN ++ + + + PG T+ + + Sbjct: 174 DLDKHPGIRVAVIGRPNVGKSTLINRMIGEERVV-AFDMPGTTRDSIY------VPFERQ 226 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G + K+ ++ + IV+ + + V L++D G+ D + Sbjct: 227 GELYTLIDTAGVRRRKNIKEKIEKFS--IVKAIEAMESSNVVVLVVDGSEGITDQDLTLL 284 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + I + K D L+ + + +Y + + + + S++ G+ L Sbjct: 285 GLALESGRGLVIAINKWDNLTSDQRAKIKHELEYKL--HFVDYAKRHLISALHGTGVGDL 342 Query: 203 RKAI 206 K I Sbjct: 343 FKTI 346 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 25/178 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N L ++ A ++ PG T+ + + +VD Sbjct: 6 IALVGRPNVGKSTLFNRLTRSRD-AIVADYPGLTRDRQYGTGR------VGSTPYIVVDT 58 Query: 92 PGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G I V L+D R G+ D+ + S++ Sbjct: 59 GGLSGEQEGVDPLMAGQVQSAIGE-------ADAVLFLVDGRAGLIPADESIASYIRHFN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +++ K ++ + Y E SS + + +++L Sbjct: 112 KPVYLLVNKA----EGHKKDVIAN-----DFYQMGLGEPFVISSAHGDNVNEMIESVL 160 >gi|296158988|ref|ZP_06841816.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1] gi|295890863|gb|EFG70653.1| ribosome-associated GTPase EngA [Burkholderia sp. Ch1-1] Length = 445 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + + + L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERV-IAFDMPGTTRDSIY------VDFERGGKPYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D L P + T + ++ A + S+ ++ GI L +++ + Sbjct: 292 ALVVGVNKWDGLDPHVRERTKADLERKLKFLDFA--KFHFISAAEKTGIGPLMRSVDDA 348 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRTGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K E ++ + Y + S+ G+ + LE Sbjct: 112 RPIFLVVNKA---------EGMKYSTVAADFYELGLGDPRAISAAHGDGVTEMINEALE 161 >gi|289666002|ref|ZP_06487583.1| GTP-binding protein EngA [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 465 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR-----LDEQQPFIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ + R + + L V ++D R G +D ++ ++L K Sbjct: 56 VDTGGI---AGDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 A +V+ KID T + + +V+ S+ R+GI+ L + + Sbjct: 111 ARPTVLVINKIDGTDEETVRSEFARY---------GFSDVVALSAAHRQGIDELLEEVAA 161 Query: 209 TI 210 + Sbjct: 162 RL 163 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ +L+ + Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDLERDGRQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 228 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIEQCQVAVLMLDATEGVTDQDATILGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + + E + S++ G+ L +A Sbjct: 286 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVSWAEAVRISALHGSGMRELFQA 343 Query: 206 I 206 I Sbjct: 344 I 344 >gi|187924514|ref|YP_001896156.1| GTP-binding protein EngA [Burkholderia phytofirmans PsJN] gi|238689579|sp|B2SXS6|DER_BURPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|187715708|gb|ACD16932.1| small GTP-binding protein [Burkholderia phytofirmans PsJN] Length = 445 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + + + L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERV-IAFDMPGTTRDSIY------VDFERGGKPYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D L P + T + ++ A + S+ ++ GI L +++ + Sbjct: 292 ALVVGVNKWDGLDPHVRERTKADLERKLKFLDFA--KFHFISAAEKTGIGPLMRSVDDA 348 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRTRD-ALVADLPGLTRD------RHYGEGRAGDRPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K E ++ + Y + S+ G+ + LE Sbjct: 112 RPIFLVVNKA---------EGMKYSNVAADFYELGLGDPRAISAAHGDGVTEMINEALE 161 >gi|269797893|ref|YP_003311793.1| small GTP-binding protein [Veillonella parvula DSM 2008] gi|269094522|gb|ACZ24513.1| small GTP-binding protein [Veillonella parvula DSM 2008] Length = 444 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 11/178 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A GR NVGKSSL N L+ + + S+ G T+ + + Sbjct: 175 DEDTIHVAVIGRPNVGKSSLTNALLGQDRV-IVSDVAGTTRDSI------DTYWTHEGQK 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + IVR L V L++D + GV + D+ + + Sbjct: 228 FVLIDTAGMRRKSKIEEAVERYS--IVRSLRSVDRADIVVLVLDAQDGVTEQDKKIAGYA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVL 202 + IV+ K D + + TL T+ + ++ S++ ++ I L Sbjct: 286 YEAGKGVVIVVNKWDLVKKDD-KTTLRFTEDIYDELGFLQFAPILFASALTKQRIHRL 342 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 18/175 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN K ++ + PG T+ +F + + ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVN-KRISIVEDIPGVTRDRIYF------DAEWLNREFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L + ++D + G+ D++V + L Sbjct: 57 DTGGIEFITENSHVIPKMMRLQAE--LAIEEADVILFVVDGKQGIVPADEEVANILRASG 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID ++ + Y + I S+ + L Sbjct: 115 KPIVLVVNKIDSVNQEP---------NIYEFYNLGLGDPIGISAKNLMNLGDLLD 160 >gi|91784203|ref|YP_559409.1| GTP-binding protein EngA [Burkholderia xenovorans LB400] gi|123168328|sp|Q13X32|DER_BURXL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|91688157|gb|ABE31357.1| Small GTP-binding protein [Burkholderia xenovorans LB400] Length = 445 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + + + L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERV-IAFDMPGTTRDSIY------VDFERGGKPYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D L P + T + ++ A + S+ ++ GI L +++ + Sbjct: 292 ALVVGVNKWDGLDPHVRERTKADLERKLKFLDFA--KFHFISAAEKTGIGPLMRSVDDA 348 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRTGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKVG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K E ++ + Y + S+ G+ + LE Sbjct: 112 RPIFLVVNKA---------EGMKYSTVAADFYELGLGDPRAISAAHGDGVTEMINEALE 161 >gi|330994712|ref|ZP_08318635.1| GTPase Der [Gluconacetobacter sp. SXCC-1] gi|329758353|gb|EGG74874.1| GTPase Der [Gluconacetobacter sp. SXCC-1] Length = 467 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 20/184 (10%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P + +GR NVGKS++ N LV R+ A ++ PG T+ + + Sbjct: 2 DALPVVVIAGRPNVGKSTIFNRLVGRRQ-ALVADTPGVTRD------RKEGQATVRGRNI 54 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G A +G + S + V ID R G+ DQ ++L Sbjct: 55 RIIDTAGLEEAAPDT----LYGRMRASSESAVAHADLVLFCIDARSGITPADQHFANWLR 110 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ ++ K E + + + + S+ +G+ L I Sbjct: 111 RQGRPVLLIANKA---------EGRQGAAAAMEAFSLGLGAPLAISAEHGEGVADLMAEI 161 Query: 207 LETI 210 ++ + Sbjct: 162 VDRL 165 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 9/178 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 GP +A GR N GKS+L+N L+ + + T PG T+ + D + Sbjct: 197 PPGPLRLAIVGRPNAGKSTLLNRLLGEERM-ITGPEPGLTRDSIAVMLSD------DEGP 249 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + LVD G + ++ + + V L++D GV + D + + Sbjct: 250 IQLVDTAGLRRKARIDETLEKMS--VSASIEALKMAEVVILVLDATLGVHEQDLQIARLI 307 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +++ + L K D + + + + V+ S++ GI L Sbjct: 308 EREGRCCVLALNKWDAVEDRADTRQAIRDRIEMSLAQMRGIPVVAFSALTGAGINKLL 365 >gi|332305588|ref|YP_004433439.1| ribosome-associated GTPase EngA [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172917|gb|AEE22171.1| ribosome-associated GTPase EngA [Glaciecola agarilytica 4H-3-7+YE-5] Length = 482 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 11/185 (5%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A P ++A G+ NVGKS+L N ++ + + + PG T+ F ++ + Sbjct: 192 ASPIKLAIVGKPNVGKSTLTNRILGEERVV-VYDQPGTTRDSIFI------PMERDGREY 244 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G R+ + V+ + IV+ L V L+ID + G+ D + F+ Sbjct: 245 VLIDTAGVRRRRSISEAVEKFS--IVKTLQAIEEANVVLLVIDAQEGITDQDLSLLGFVL 302 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S + + K D L E + + + S++ + L +++ Sbjct: 303 NSGRSLVLAVNKWDGLDKDVKDEIKRELDRRLG--FIDFARLHFISALHGTNVGHLFESV 360 Query: 207 LETIN 211 E N Sbjct: 361 QEAYN 365 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQAN------YEGLQFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L V L+D R G+ DQ + L K+ Sbjct: 55 VDTGGI-----SGDEQGIDMAMANQSLMAIDEADVVLFLVDARVGLTGADQGIAEHLRKQ 109 Query: 149 AVSYQIVLTKIDKLS 163 S +V K+D + Sbjct: 110 NKSVYVVANKVDGID 124 >gi|149183701|ref|ZP_01862112.1| GTP-binding protein EngA [Bacillus sp. SG-1] gi|148848583|gb|EDL62822.1| GTP-binding protein EngA [Bacillus sp. SG-1] Length = 436 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 13/184 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 + + GR NVGKSSL+N L+ + SN G T+ S LK + Sbjct: 173 EDVIKFSLIGRPNVGKSSLVNALLGEDRV-IVSNVAGTTRDAI------DSKLKVDGQEY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G ++ + + L R L V ++ID G+ + D+ + + Sbjct: 226 VIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVIDGEEGIIEQDKKIAGYAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLRK 204 + IV+ K D + +T++K + IR + + +I S+ ++ I L Sbjct: 284 EAGRGVIIVVNKWDAVEKDE--KTMKKFEENIREHFLFLDYAPIIFLSAKTKRRIHTLIP 341 Query: 205 AILE 208 I + Sbjct: 342 VIDQ 345 Score = 92.5 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + D+ ++ Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-ISIVEDVPGVTRDRI-YSSADWLTH-----DFNII 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P I + L + R GV D+ V L + Sbjct: 57 DTGGIEIGDEPFLEQIRQQAEI-----AIDEADVIVFLTNGREGVTAADEIVAKILYRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + KID E + + Y E P S G+ + + + Sbjct: 112 KPVVLAVNKID---------NPEMRELVYDFYSLGFGEPFPISGAHGIGLGDMLDEVAK 161 >gi|311694388|gb|ADP97261.1| GTP-binding protein EngA [marine bacterium HP15] Length = 452 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 11/168 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L+N ++ + + PG T+ + + L+D Sbjct: 158 IGVVGRPNVGKSTLVNRMLGEDRVV-VYDMPGTTRDSVYI------PYERQGSQYTLIDT 210 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + V+ + I++ L V L+ID R G+ D + F+ S Sbjct: 211 AGVRRRKNVSEVVEKFS--IIKTLQAIDDAHVVILVIDAREGLVDQDLHLIGFVLDAGRS 268 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 I + K D + P E+ + + A I S++ G+ Sbjct: 269 LVIAVNKWDGMDPEDRARVKEQVQRRLDFLDYADKHYI--SALHGSGV 314 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 20/158 (12%) Query: 50 VNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 + R A ++ PG T+ + ++D G Sbjct: 1 MTRSRDALVADFPGLTRDRKY------GEGSYEGQRFIVIDTGGL-----TGDEQGLDLE 49 Query: 110 LIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE 169 + + + V L+D R G+ D+ + L + +V+ K D P A Sbjct: 50 MARQSMQAVEEADIVLFLVDGRAGLTAGDELIADSLRRSGKQAHLVVNKTDGQDPDIAAS 109 Query: 170 TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 Y ++ +GI + + +L Sbjct: 110 ---------DFYSLGFESTFLIAASHNRGIRSMLEILL 138 >gi|58337483|ref|YP_194068.1| GTP-binding protein Era [Lactobacillus acidophilus NCFM] gi|81311455|sp|Q5FJT7|ERA_LACAC RecName: Full=GTPase Era gi|58254800|gb|AAV43037.1| GTP-binding protein [Lactobacillus acidophilus NCFM] Length = 301 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SDRMQVIFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + LS + + V +++ + + DQ + L + V Sbjct: 64 PGI---FKPHSKLDDYMD--KASLSSLNDVDLVLFMVEP-EDMGKGDQYIADLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ P ++ L E++P S+ + GI+ L I + + Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----DGFKEILPISATQGIGIDDLLNTIYKYL 171 >gi|295106000|emb|CBL03543.1| ribosome-associated GTPase EngA [Gordonibacter pamelaeae 7-10-1-b] Length = 438 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 10/178 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKSSL N + + + + S+ G T+ + ++++ +VD Sbjct: 181 VAIIGRPNAGKSSLTNKMT-KGDRSIVSDVAGTTRDAI------DTAVEHDGTLYTIVDT 233 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++V+ +G VR + L+ID G+ DQ V + ++ + Sbjct: 234 AGLRRKSQIDQDVEYYG--FVRAMRAIDRADVALLVIDSTLGLTDQDQRVAGYAAERGCA 291 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 IVL K D + A+ + + + R + V+ S++ K ++ + +AI E Sbjct: 292 MVIVLNKWDLVEGPEAKADIRE-RIADRMTFVGYAPVVAISALTGKKVDRIWEAIDEA 348 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 67/182 (36%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+ +N + + + A G T+ ++ N L Sbjct: 3 LPLVAVVGRPNVGKSTFVNRIA-QADEAIVHEMRGVTRDRSYHEAD------WNGVEFKL 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + G + + ++ + V ++D + G+ D+ V L K Sbjct: 56 VDTGGIEMG----DDDAFQGSIRAQAIAGANEADVVIFIVDGKTGINADDEAVARILRKA 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + T L Y + P SS G L A++E Sbjct: 112 GKPVFLVVNKMDTPNRTD---------ELWEFYQLGVGDPWPVSSTHGHGTGDLLDAVVE 162 Query: 209 TI 210 + Sbjct: 163 EL 164 >gi|237723395|ref|ZP_04553876.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229447917|gb|EEO53708.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 396 Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 51/193 (26%), Positives = 77/193 (39%), Gaps = 26/193 (13%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P A IAF GR N GKSSLIN L + + A S+ PG T L + Sbjct: 2 SLTDTPSASRLHIAFFGRRNSGKSSLINALTGQ-DTALVSDTPGTTTDL----VSKAMEI 56 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI-- 137 + P + +D PG+ + I R L LL G Sbjct: 57 QGIGPCL-FIDTPGFDDEGELGELR------ISRTLKAIEKTDIALLLC----GDTTFSY 105 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 ++++ + L +K + VL KID +E + I P + S+ ++ Sbjct: 106 EKEMLALLKEKNIPVIPVLNKID------IRENSDSLATYIEEECKIRP--LLISAKEKT 157 Query: 198 GIEVLRKAILETI 210 GIE +R+AILE + Sbjct: 158 GIEQIRQAILEKL 170 >gi|293400643|ref|ZP_06644788.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305669|gb|EFE46913.1| ribosome-associated GTPase EngA [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 438 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 13/184 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 G GR NVGKSSL+N L+N++ + SN G T+ + K Sbjct: 174 DGMTRFCVIGRPNVGKSSLVNALLNQERV-IVSNIEGTTRDAI------DTPFKREGKEY 226 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G +N++ + L ERS V ++ID G++ D+ V F Sbjct: 227 VVIDTAGIRKRGKVYENIEKYSVLRAMSAIERSD--VVLVVIDGESGIRDQDKHVAGFAH 284 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRK 204 + IV K D + +T+ + + IR ++ ++ S++K++ I+ + Sbjct: 285 EAGKGVIIVYNKWDAVEKDE--KTMNRIEKEIRTQFQYLSYAPILFVSALKKQRIQTILP 342 Query: 205 AILE 208 I + Sbjct: 343 MIDD 346 Score = 92.5 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 64/178 (35%), Gaps = 21/178 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS++ N ++ + + + PG T+ + + + ++D Sbjct: 8 VAIVGRPNVGKSTIFNRIIGERK-SIVEDTPGVTRDRIYGKAEWLTK------EFRVIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A P + + I + +++ + G+ D+ + L + Sbjct: 61 GGIQLADQPFREEINMQVEI-----AIDEADTILFVVNGKEGITNDDEYIARLLQRSQKK 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D ++ + Y + I S GI + AI+ + Sbjct: 116 VILAVNKVD---------DFAQSDSIYEFYNLGLSDPIAVSGAHGIGIGDILDAIVNS 164 >gi|227904119|ref|ZP_04021924.1| GTP-binding protein Era [Lactobacillus acidophilus ATCC 4796] gi|227868138|gb|EEJ75559.1| GTP-binding protein Era [Lactobacillus acidophilus ATCC 4796] Length = 308 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 18 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SDRMQVIFVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + LS + + V +++ + + DQ + L + V Sbjct: 71 PGI---FKPHSKLDDYMD--KASLSSLNDVDLVLFMVEP-EDMGKGDQYIADLLKEVKVP 124 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ P ++ L E++P S+ + GI+ L I + + Sbjct: 125 VFLVINKVDQIHPNKLLPIMDSYHKL-----DGFKEILPISATQGIGIDDLLNTIYKYL 178 >gi|148827277|ref|YP_001292030.1| GTP-binding protein EngA [Haemophilus influenzae PittGG] gi|148718519|gb|ABQ99646.1| GTP-binding protein EngA [Haemophilus influenzae PittGG] Length = 504 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + L+D Sbjct: 217 KIAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSIYI------PMERDGQQYTLID 269 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + +++ L V L ID R + D + F+ Sbjct: 270 TAGVRKRGKVHLAVEKFS--VIKTLQAIQDANVVLLTIDARENISDQDLSLLGFILNAGR 327 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D L + + V S++ G+ L +I E Sbjct: 328 SLVIVVNKWDGLDQDVKDRVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSIKEA 384 Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GHAHIAGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + ++L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIDEADIVLFLVDARAGLTAADIGIANYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVLVANKTDGIDADS---------HCAEFYQLGLGEIEQIAASQGRGVTQLMEQVL 161 >gi|282878065|ref|ZP_06286870.1| ribosome-associated GTPase EngA [Prevotella buccalis ATCC 35310] gi|281299805|gb|EFA92169.1| ribosome-associated GTPase EngA [Prevotella buccalis ATCC 35310] Length = 437 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P A GR N GKSSLIN + + G T+ + F Sbjct: 172 EEDIPRFAVVGRPNAGKSSLINAFIGEDR-HIVTEIAGTTRDSIYTRFDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L+ID G++ D ++F + Sbjct: 225 FYLVDTAGIRRKSKVSEDLEFYSVM--RSIRSIENSDVCILMIDATRGIESQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 K S +V+ K D + + ++ + IR P A +I S++ ++ I Sbjct: 283 QKNHKSLVVVVNKWDLVEDKD-HKVIKTFENAIRERMAPFADFPIIFASALTKQRI 337 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QSRKAIVSDTAGTTRDRQY------GKCSWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ +IV V ++D ++G+ D DV L + + Sbjct: 58 GGWVVNSDDVFEDAIRRQVIVAT----EEADLVLFMVDVKNGLTDWDADVAQILRRTKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y + S+ G L +LE + Sbjct: 114 VILVGNKVD---------NSAEYYTAAEFYRLGLGDPQCISAATGGGTGDLLDLVLEKL 163 >gi|304391252|ref|ZP_07373196.1| ribosome-associated GTPase EngA [Ahrensia sp. R2A130] gi|303296608|gb|EFL90964.1| ribosome-associated GTPase EngA [Ahrensia sp. R2A130] Length = 478 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 67/180 (37%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR NVGKS+L N LV K LA + PG T+ N + ++D Sbjct: 5 VAVAGRPNVGKSTLFNRLVG-KRLALVDDQPGVTRDRR------SGNARIGDIKFEVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A G + + LID R GV +D+ + L + Sbjct: 58 AGLEEA----DQASLEGRMRAQTEQAIIDANVTLFLIDARAGVTPMDKSFATMLRRAGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K+ E + + E +P S+ +G+ LR A++E + Sbjct: 114 VILVANKV---------EGRKGDDGFYEAFEMGFGEPVPISAEHGEGMADLRNALVEAVG 164 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 13/183 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +I GR N GKS+LIN ++ L T G T+ + + ++ L Sbjct: 205 PLKICIVGRPNAGKSTLINRMLGEDRL-LTGPEAGITRDSI------SVDWEWQGRSIKL 257 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G ++ ++ + L V ++ D ++ D + + ++ Sbjct: 258 FDTAGMRRKARVQEKLEKLS--VHDALRAIQYAEVVVIMFDATIPFEKQDLHIVDLIHRE 315 Query: 149 AVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K D + +E EKT+ L+ + S KG++ L +A+ Sbjct: 316 GRAPVLAFNKWDLVPDKQAALKELHEKTERLLPQLRGL--RTVTLSGQSGKGLDRLMEAV 373 Query: 207 LET 209 ++ Sbjct: 374 IDA 376 >gi|168186800|ref|ZP_02621435.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund] gi|169295122|gb|EDS77255.1| GTP-binding protein EngA [Clostridium botulinum C str. Eklund] Length = 438 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 13/180 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + IA GR NVGKSSLIN ++ + SN PG T+ S ++ Sbjct: 173 EDEYIRIAMIGRPNVGKSSLINRILGEEK-HIVSNIPGTTRDAV------DSYIETEEGK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+ V+ + VR L+ L+ID + + D+ + + Sbjct: 226 FVLIDTAGLRRKSKIKEQVERYSA--VRTLASIENADVCILMIDATEDIAEQDERIIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 + + +++ K D + +T++ K +R + P + S+ + + + Sbjct: 284 HEINKAIVVIVNKWDLIEKDD--KTMKNFKDKLRTKLSFLPYASFLFISAKTGQRVHKVL 341 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 20/180 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + + +N Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVDDMPGVTRDRIYAEAEWLNN------NFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + + V ++D + G+ D++V L K Sbjct: 55 IIDTGGI----EPENDDIIVAQMRRQAQLAIEMADVVLFIVDGKQGLTDADREVAHMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 S + + KID + L+ + Y E +P S+ + G+ L ++ Sbjct: 111 ANKSIVLAVNKID-------RRQLDD--NIYEFYNLGLGEPMPISASQGLGLGDLLDEVV 161 >gi|169795097|ref|YP_001712890.1| GTP-binding protein Era [Acinetobacter baumannii AYE] gi|213158241|ref|YP_002320292.1| GTP-binding protein Era [Acinetobacter baumannii AB0057] gi|301345823|ref|ZP_07226564.1| GTP-binding protein Era [Acinetobacter baumannii AB056] gi|301594765|ref|ZP_07239773.1| GTP-binding protein Era [Acinetobacter baumannii AB059] gi|169148024|emb|CAM85887.1| GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase [Acinetobacter baumannii AYE] gi|193078015|gb|ABO12935.2| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase [Acinetobacter baumannii ATCC 17978] gi|213057401|gb|ACJ42303.1| GTP-binding protein Era [Acinetobacter baumannii AB0057] Length = 342 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID H Q D V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDA-HKWTQNDDLVLEKLKNADM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 149 PVILVINKADTFGDKREILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 204 Query: 211 NY 212 Y Sbjct: 205 PY 206 >gi|209521123|ref|ZP_03269851.1| small GTP-binding protein [Burkholderia sp. H160] gi|209498433|gb|EDZ98560.1| small GTP-binding protein [Burkholderia sp. H160] Length = 445 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERV-IAFDMPGTTRDSIY------VDFERNGKPYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D L P + T + ++ A + S+ ++ GI L +++ + Sbjct: 292 ALVVGVNKWDGLDPHVRERTKADLERKLKFLDFA--KFHFISAAEKTGIGPLMRSVDDA 348 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRAGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEESDVVVFIVDGRNGLAPQDKSIADYLRKVG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYANVAADFYELGLGDPRAISAAHGDGV 152 >gi|77362053|ref|YP_341627.1| GTP-binding protein EngA [Pseudoalteromonas haloplanktis TAC125] gi|123744148|sp|Q3ICZ9|DER_PSEHT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|76876964|emb|CAI89181.1| GTP-binding protein, essential for cell growth in E. coli and B. subtilis, regulates ribosome synthesis [Pseudoalteromonas haloplanktis TAC125] Length = 487 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 11/183 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P ++A GR NVGKS+L N ++ + + + PG T+ + + N Sbjct: 198 DKPVKLAIIGRPNVGKSTLTNRILGEERV-IVYDMPGTTRDSIYI------PMTRNDKEY 250 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + V+ + +++ L V L++D R G+ D + F Sbjct: 251 ILIDTAGVRKRKKVSDVVEKFS--VIKTLQAIEDCNVVLLVVDARAGISDQDLSLLGFAL 308 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S I + K D L + + + S++ G+ L +++ Sbjct: 309 NSGRSLVIAVNKWDGLDDYVKDRIKSELDRRLG--FIDFARLHFISALHGTGVGHLFESV 366 Query: 207 LET 209 E Sbjct: 367 DEA 369 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 LPVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQAN------YDGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ ++ + + L V L+D R G+ DQ + + L K+ Sbjct: 55 VDTGGI---DGSEEGIEI--EMADQSLLAIEEADIVLFLVDARVGMTVADQAIANHLRKQ 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V K D + + Y + E+ ++ +GI +L + Sbjct: 110 EKKCFVVANKTDGIDADS---------NCAEFYQLSLGEIHHIAASHGRGITLLLE 156 >gi|319787003|ref|YP_004146478.1| ribosome-associated GTPase EngA [Pseudoxanthomonas suwonensis 11-1] gi|317465515|gb|ADV27247.1| ribosome-associated GTPase EngA [Pseudoxanthomonas suwonensis 11-1] Length = 465 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A + PG T+ ++ V + + L Sbjct: 2 LPLVALVGRPNVGKSTLFNALTRSRD-ALVHDEPGVTRDRHYGVCR-----LDPDRPFLL 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ + R + + L + ++D R G +D ++ S+L K Sbjct: 56 VDTGGI---AGDEEGLAGATARQARAAAAEADL--ILFVVDGREGTSALDDEILSWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 A +V+ KID T +E + Y +++ S+ R+G++ L +LE Sbjct: 111 ARPTLLVVNKID----GTFEE---AVRGEFARY--GFADMLAVSAAHRQGLDDLHAEVLE 161 Query: 209 TI 210 + Sbjct: 162 RL 163 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 13/190 (6%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 V E+ P IAF GR NVGKS+L+N ++ + + S PG T+ Sbjct: 168 SVEELDNDP--DRLRIAFVGRPNVGKSTLVNRVLGEERM-IASEVPGTTRDSI------A 218 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 +L+ + L+D G ++ V+ + +V+ L + L++D GV Sbjct: 219 VDLERDGRLYRLIDTAGIRRKGKIEEAVEKFS--VVKTLQAIERCQVAVLMLDATEGVTD 276 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D V + + I + K D L+ ++ + + P A E + S+ Sbjct: 277 QDATVLGAVLDAGRALVIAVNKWDGLTTYQREQAEALLERKLGFVPWA--EAVRISAKHG 334 Query: 197 KGIEVLRKAI 206 G+ L +AI Sbjct: 335 SGLRELFRAI 344 >gi|289548419|ref|YP_003473407.1| GTP-binding protein Era [Thermocrinis albus DSM 14484] gi|289182036|gb|ADC89280.1| GTP-binding protein Era [Thermocrinis albus DSM 14484] Length = 302 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 17/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+L+N L+ K ++ S PG T+ V N + +D Sbjct: 6 VAIVGKPNVGKSTLLNNLIGTK-VSIVSPKPGTTRIRVLGVKNIP-----NEAQIVFLDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS-FLDKK-- 148 PG R ++ + + + +ID G +Q D+ VF+ ++ + Sbjct: 60 PGIYRPRDALGEA-----MVSQAATSLQDADVILFMIDAEDGWRQDDEMVFNTYIKQYAK 114 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+DK+ P E L K + +P EVIP S++K ++ L K I++ Sbjct: 115 DKPVFLVINKVDKVGP--VDELLPFVKEITDQHPE-FREVIPISALKGYNLDELLKTIVK 171 Query: 209 TI 210 + Sbjct: 172 YL 173 >gi|262373077|ref|ZP_06066356.1| GTP-binding protein Era [Acinetobacter junii SH205] gi|262313102|gb|EEY94187.1| GTP-binding protein Era [Acinetobacter junii SH205] Length = 341 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 41 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIVGIDS------REKSQAVFVDT 93 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V ++D + Q D+ V L + Sbjct: 94 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVVDAQ-KWTQNDELVLEKLKNAEM 147 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D L + + + ++ E++P S+++ +E LR I + + Sbjct: 148 PVILVINKLDTFENKNEALPLIRERAKLMDFA----EIVPVSALRGANLEHLRDTIEKYL 203 Query: 211 NY 212 Y Sbjct: 204 PY 205 >gi|153853314|ref|ZP_01994723.1| hypothetical protein DORLON_00710 [Dorea longicatena DSM 13814] gi|149754100|gb|EDM64031.1| hypothetical protein DORLON_00710 [Dorea longicatena DSM 13814] Length = 442 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 13/180 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A G+ NVGKSS+IN L ++ + S+ G T+ +N+K N Sbjct: 177 RPRVAIVGKPNVGKSSIINKLTGKQRV-IVSDVAGTTRDAI------DTNVKYNGKDYVF 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 230 IDTAGLRRKSKIKEELERYS--IIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHER 287 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 IV+ K D + +T+ + + +R + P E++ S+ + + L I Sbjct: 288 GKGIIIVVNKWDAIEKND--KTMREYENNVRRVLSFMPYAEIMYVSAETGQRLNKLYDMI 345 Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + +++ ++ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGE-MISIVKDTPGVTRDRIY------ADVTWLDKEFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ + + T + + D R G+ D V L + Sbjct: 57 DTGGI----EPESKDIILSQMREQAQIAIDTADVIIFITDVRQGLVDADSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D + Y + +P S+ R GI + A++ Sbjct: 113 KPVVLAVNKVDNFDK--------FMPDVYEFYNLGIGDPVPVSAASRLGIGDMLDAVI 162 >gi|313901830|ref|ZP_07835252.1| ribosome-associated GTPase EngA [Thermaerobacter subterraneus DSM 13965] gi|313467912|gb|EFR63404.1| ribosome-associated GTPase EngA [Thermaerobacter subterraneus DSM 13965] Length = 454 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 77/184 (41%), Gaps = 13/184 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G +A GR NVGKSSL+N L+ + + S+ PG T+ + Sbjct: 181 ETGEIAVAIVGRPNVGKSSLVNRLLGEERVV-VSDIPGTTRDAV------DVLWRRGERV 233 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K +V+ + L + R+ + C+ L D R + D+ + + Sbjct: 234 FRFIDTAGLRRKSRVKDDVEFYSTLRTQRALARADVACLVL--DARDPATEQDKRIAGMI 291 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYP-TAHPEVIPTSSVKRKGIEVLR 203 ++ + + + K D ++ +T ++ + + R Y V+ S++ + ++ L Sbjct: 292 LEEGKACVLAVNKWDLVAKGP--DTADQYREALYREYDFLQFAPVVFLSALTGQRVDRLV 349 Query: 204 KAIL 207 + + Sbjct: 350 EVLA 353 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 68/178 (38%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N ++ R+ LA + PG T+ + D++ LV Sbjct: 3 PVVAIVGRPNVGKSTLFNRIIERR-LAIEDDVPGVTRDR-LYADTDWAG-----REFTLV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + +++D + GV D++V L + Sbjct: 56 DTGGLAEGDDPLTVQVRRQVE-----AAVREADLLIMVVDGQAGVTPADEEVARLLRQSR 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D + +Y + E IP ++ + + L A++ Sbjct: 111 KPTILAVNKVD-------DARWDGVQY--DFFRLGLGEPIPVAAGPGRNVGDLLDAVV 159 >gi|325919426|ref|ZP_08181452.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Xanthomonas gardneri ATCC 19865] gi|325550092|gb|EGD20920.1| small GTP-binding protein domain/GTP-binding conserved hypothetical protein [Xanthomonas gardneri ATCC 19865] Length = 465 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR-----LDEERPFIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ + R + + L V ++D R G +D ++ ++L K Sbjct: 56 VDTGGI---AGDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +V+ KID T + + +V+ S+ R+GI+ L + + Sbjct: 111 ARPTVLVINKIDGTDEETVRSEFARY---------GFSDVVALSAAHRQGIDELLEEV 159 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 68/181 (37%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ ++ + Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDMDRDGRQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 228 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIEQCQVAVLMLDAGEGVTDQDATILGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + + E + S++ G+ L +A Sbjct: 286 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVSWAEAVRISALHGSGMRELFQA 343 Query: 206 I 206 I Sbjct: 344 I 344 >gi|332851054|ref|ZP_08433163.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013150] gi|332869697|ref|ZP_08438885.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013113] gi|332730218|gb|EGJ61543.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013150] gi|332732599|gb|EGJ63832.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013113] Length = 340 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 40 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 92 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID H Q D V L + Sbjct: 93 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDA-HKWTQNDDLVLEKLKNADM 146 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 147 PVILVINKADTFGDKREILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 202 Query: 211 NY 212 Y Sbjct: 203 PY 204 >gi|307294125|ref|ZP_07573969.1| ribosome-associated GTPase EngA [Sphingobium chlorophenolicum L-1] gi|306880276|gb|EFN11493.1| ribosome-associated GTPase EngA [Sphingobium chlorophenolicum L-1] Length = 456 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 20/183 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N LV +K LA + PG T+ + Sbjct: 2 LPTVAIVGRPNVGKSTLFNRLVGKK-LALVDDQPGVTRDRREGQASLLG------VDFTI 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D GY + G + ++ + ++D R G+ +D+++ +L + Sbjct: 55 IDTAGY----EDEDPQTLPGRMRMQTQAAVENADVALFVVDARAGITPLDEEIARWLREG 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ K E ++ + + +P S+ +G+ L +A+L Sbjct: 111 DAPVVLMANKA---------EGRAGDDGVMEAFSLGLGDPVPFSAEHGQGLADLFQALLP 161 Query: 209 TIN 211 I+ Sbjct: 162 YID 164 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 8/186 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ P ++A GR N GKS+LIN L+ L T G T+ + V +++ Sbjct: 181 ESAPLKLAIVGRPNAGKSTLINRLLGENRL-LTGPEAGITRD-SIAVDWQWTSPDGQERP 238 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G + ++ + L+ + V LL+D G++ D + + Sbjct: 239 VRLIDTAGMRKRAKVQDKLEKLA--VSDGLNAVNFAEVVVLLLDSTRGLEAQDLRIADKV 296 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLR 203 ++ + + L K D + +A + K + + ++ S KG++ L Sbjct: 297 LEEGRALVVALNKWDTVEHGSA--LYQGIKQALSDGLAQIRGVPIMTVSGATGKGLDDLI 354 Query: 204 KAILET 209 + ET Sbjct: 355 RVAFET 360 >gi|78045106|ref|YP_360738.1| GTP-binding protein EngA [Carboxydothermus hydrogenoformans Z-2901] gi|123575819|sp|Q3AAU6|DER_CARHZ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|77997221|gb|ABB16120.1| GTP-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 440 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 9/181 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKSSL+N L+ + + S+ PG T+ + + Sbjct: 173 ENPVVKIAVVGRPNVGKSSLVNALLGEERVV-VSDIPGTTRDAI------DTPMWYQGKP 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G +++++ + + R + L+I GV + D+ + + Sbjct: 226 YLLIDTAGMRRKSRIEEDLERYS--VNRSIKAIRRADVALLVISAEEGVTEQDKKIAGLI 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + IV+ K D + K + VI S+ + + L + Sbjct: 284 HEYGRGVIIVVNKWDLIEKDAKTADRYKEHIYFELGFLKYAPVIFVSAKTGQRLNKLMEL 343 Query: 206 I 206 + Sbjct: 344 V 344 Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 24/185 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N ++ + +A + PG T+ + S + L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNRIIGER-IAIVEDTPGVTRDRLY------SEAEWQGKVFDLI 56 Query: 90 DMPGYGYAR--APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D G ++ K + I + + D R G+ D+ V L K Sbjct: 57 DTGGLEFSEDLITTKVREQIEKAINE-------ADLILFVCDSREGITSTDEAVAKNLRK 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K+D + L Y E P S+ + L ++ Sbjct: 110 SDKPVILVANKVD--------DYLNPPANFYDLYRLGLGEPFPVSAANGTNVGDLLDLVI 161 Query: 208 ETINY 212 +N+ Sbjct: 162 SKLNF 166 >gi|325265091|ref|ZP_08131818.1| ribosome-associated GTPase EngA [Clostridium sp. D5] gi|324029781|gb|EGB91069.1| ribosome-associated GTPase EngA [Clostridium sp. D5] Length = 442 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 81/195 (41%), Gaps = 16/195 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + E + P IA G+ NVGKSS+IN L+ + S+ G T+ Sbjct: 165 FPKSAGEEE---EDDRPRIAIVGKPNVGKSSIINKLLGENRV-IVSDVAGTTRDAI---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + ++ +D G K+ ++ + I+R ++ V ++ID G Sbjct: 217 --DTEILHDGKEYIFIDTAGLRRKSRIKEELERYS--IIRTVTAVERADVVLIVIDAEEG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPT 191 V + D + ++ IV+ K D + +T+ + IR + ++ E++ Sbjct: 273 VTEQDAKIAGIAHERGKGIIIVVNKWDAVEKND--KTMREYDNKIRQVLSYLSYAEIMYV 330 Query: 192 SSVKRKGIEVLRKAI 206 S+V + + L + I Sbjct: 331 SAVTGQRLNKLYEMI 345 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 19/177 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ + PG T+ + +++ ++ Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGE-MISIVKDTPGVTRDRIY------ADVSWLDREFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + T + + D + G+ D V L + Sbjct: 57 DTGGI----EPDSRDVILSQMREQAQIAIDTADVIIFITDVKQGLVDSDSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+D + Y + +P S+ R G+ + + Sbjct: 113 KPVILVVNKVDNFDK--------FMPDVYEFYNLGIGDPVPISAASRLGLGDMLDEV 161 >gi|295676899|ref|YP_003605423.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002] gi|295436742|gb|ADG15912.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1002] Length = 445 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERV-IAFDMPGTTRDSIY------VDFERNGKPYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D L P + T + ++ A + S+ ++ GI L +++ + Sbjct: 292 ALVVGVNKWDGLDPHVRERTKADLERKLKFLDFA--KFHFISAAEKTGIGPLMRSVDDA 348 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRTGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEESDVVVFIVDGRNGLAPQDKSIADYLRKVG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTNVAADFYELGLGDPRAISAAHGDGV 152 >gi|169632754|ref|YP_001706490.1| GTP-binding protein Era [Acinetobacter baumannii SDF] gi|260556583|ref|ZP_05828801.1| GTP-binding protein Era [Acinetobacter baumannii ATCC 19606] gi|169151546|emb|CAP00313.1| GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase [Acinetobacter baumannii] gi|260409842|gb|EEX03142.1| GTP-binding protein Era [Acinetobacter baumannii ATCC 19606] Length = 342 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID H Q D V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDA-HKWTQNDDLVLDKLKNADM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 149 PVILVINKADTFGDKREILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 204 Query: 211 NY 212 Y Sbjct: 205 PY 206 >gi|153816157|ref|ZP_01968825.1| hypothetical protein RUMTOR_02405 [Ruminococcus torques ATCC 27756] gi|317500477|ref|ZP_07958701.1| GTP-binding protein engA [Lachnospiraceae bacterium 8_1_57FAA] gi|331089422|ref|ZP_08338321.1| GTP-binding protein engA [Lachnospiraceae bacterium 3_1_46FAA] gi|145846492|gb|EDK23410.1| hypothetical protein RUMTOR_02405 [Ruminococcus torques ATCC 27756] gi|316898232|gb|EFV20279.1| GTP-binding protein engA [Lachnospiraceae bacterium 8_1_57FAA] gi|330404790|gb|EGG84328.1| GTP-binding protein engA [Lachnospiraceae bacterium 3_1_46FAA] Length = 441 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 74/183 (40%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A G+ NVGKSS+IN L+ + S+ G T+ + + +N Sbjct: 174 DDDRPRVAIVGKPNVGKSSIINKLLGENRV-IVSDIAGTTRDAI------DTEILHNGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ V ++ID GV + D + Sbjct: 227 YIFIDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLMVIDATEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 ++ IV+ K D + T+ + + IR + P E++ S+ + + L Sbjct: 285 HERGKGVIIVVNKWDAIEKNDR--TMREYESDIRQVLSYMPYAEIMYVSAATGQRLNRLY 342 Query: 204 KAI 206 I Sbjct: 343 DMI 345 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 19/179 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ + PG T+ + +++ ++ Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGE-MISIVKDTPGVTRDRIY------ADVTWLDKEFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + T + + D + G+ D V L + Sbjct: 57 DTGGI----EPDSKDIILSQMREQAQIAIDTADVIIFITDVKQGLVDADSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + Y + +P S+ R G+ + + E Sbjct: 113 KPVVLVVNKVDNFDK--------YMADVYEFYNLGIGDPVPISAASRLGLGDMLDIVAE 163 >gi|313203779|ref|YP_004042436.1| ribosome-associated GTPase enga [Paludibacter propionicigenes WB4] gi|312443095|gb|ADQ79451.1| ribosome-associated GTPase EngA [Paludibacter propionicigenes WB4] Length = 437 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 77/192 (40%), Gaps = 12/192 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P+ + P A GR N GKSS+IN V + ++ G T+ + F Sbjct: 165 PDFSDDLEEELPRFAVVGRPNAGKSSIINAFVGEERT-IVTDIAGTTRDSIYTRFNKFG- 222 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 LVD G ++++ + +VR + L+ID G++ D Sbjct: 223 -----HDFYLVDTAGIRKKAKVNEDLEYYS--VVRSIRAIENCDVCILMIDATRGIESQD 275 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKR 196 ++FS + K + + + K D + + + ++K + IR +I TS+ + Sbjct: 276 LNIFSLIQKNRKGFIVCVNKWDLIENKESND-IKKYEATIRERLAPFVDFPIIFTSATTK 334 Query: 197 KGIEVLRKAILE 208 + I + + +E Sbjct: 335 QRILKVLETAVE 346 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 22/177 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A ++ G T+ + + +++D Sbjct: 5 VAIVGRPNVGKSTLFNRLT-KSRRAIVNDEAGTTRDRQY------GKCEWEGREFSVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G+ + D + G I R+ + + L+D ++G+ D +V L + Sbjct: 58 GGWVINSS-----DVFEGEIKRHVVLAIEEADVILFLVDIQNGITDYDLEVAQILRGQTK 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D T E + Y E S++ G +L Sbjct: 113 PVMLVSNKAD---------TFEWQYGVAEFYKLGLGEPHMISAINGLGTGDFLDKLL 160 >gi|164686279|ref|ZP_02210309.1| hypothetical protein CLOBAR_02717 [Clostridium bartlettii DSM 16795] gi|164601881|gb|EDQ95346.1| hypothetical protein CLOBAR_02717 [Clostridium bartlettii DSM 16795] Length = 296 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 19/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N +V K +A S+ P T++ V D + +D Sbjct: 7 VSIVGRPNVGKSTLMNNVVGEK-IAIMSDKPQTTRNTIQAVYTD------EECQIVFLDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + G +V+ ++ + V ++D + D+ + L Sbjct: 60 PGIHKPK------NKLGEFMVKSATDAFKNVDLVLFVVDDSKKIGPGDRKIIEDLRGIKT 113 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KIDKL + E ++ + + ++P S++K + + L K I + Sbjct: 114 PVILVLNKIDKLEESELFELMQ-----LYSNEDLFKAIVPISALKGRNVNELLKVIGNYL 168 >gi|253996245|ref|YP_003048309.1| GTP-binding protein EngA [Methylotenera mobilis JLW8] gi|253982924|gb|ACT47782.1| small GTP-binding protein [Methylotenera mobilis JLW8] Length = 484 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 74/176 (42%), Gaps = 11/176 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P++A GR NVGKS+L+N L+ + + + PG T+ +L+ N Sbjct: 177 DRIPKVAIVGRPNVGKSTLVNALLGEERV-IAYDEPGTTRDSIHI------DLEKNGKHY 229 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ + +++ + V L++D + G+ + D V +++ Sbjct: 230 TLIDTAGVRKRGRVFEAIEKFS--VIKTIQAIEEANVVILVVDAQEGITEQDAHVAAYIL 287 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + K D L + ++ A E S++++KG+ L Sbjct: 288 DAGRALVVAINKWDGLKEDERDWIKREIDRKLQFLDFA--EFHYISALRKKGLPEL 341 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 20/180 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P I GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPTIVLVGRPNVGKSTLFNRLTKTRD-ALVADLPGLTRD------RHYGRGIGASQPYLV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G+ P + + + L + L+D R GV D ++ + L + Sbjct: 55 VDTGGF----EPHTDSGILKAMAKQTLQAIDEADAIIFLVDGRQGVSPQDMEIANRLRRS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K E ++K + + SS +G+ + + LE Sbjct: 111 KCPVLLAVNKT---------EGMQKAVVSADFHELGLGYPLSISSAHGEGVRDIVELALE 161 >gi|168179376|ref|ZP_02614040.1| GTP-binding protein Era [Clostridium botulinum NCTC 2916] gi|182669495|gb|EDT81471.1| GTP-binding protein Era [Clostridium botulinum NCTC 2916] Length = 296 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ K L+ S P T++ + + + + VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTE------DNYQLVFVDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ + V LI+ + D + L + V Sbjct: 60 PGIHKPK-----HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVKVP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + I Sbjct: 115 VFLVLNKIDENPQEKVAETLKAYSELME-----FEEIIPISALKGKNIDLLKELMFKYI 168 >gi|254506757|ref|ZP_05118897.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16] gi|219550338|gb|EED27323.1| GTP-binding protein EngA [Vibrio parahaemolyticus 16] Length = 494 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 202 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 255 YVLIDTAGVRRRTRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + ++ + + S++ G+ L ++ Sbjct: 313 LNAGRSIVIAVNKWDGLDMDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 12/143 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + L K Sbjct: 55 IDTGGI---DGTEEGVET--KMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIAKHLRKL 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETL 171 +V+ K+D + A Sbjct: 110 EKPSMLVVNKVDGIDADAASAEF 132 >gi|264679419|ref|YP_003279326.1| small GTP-binding protein [Comamonas testosteroni CNB-2] gi|262209932|gb|ACY34030.1| small GTP-binding protein [Comamonas testosteroni CNB-2] Length = 446 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A +GR N GKS+LIN + + L + PG T+ + N Sbjct: 177 DQKPVRLAVAGRPNAGKSTLINTWLGEERLV-AFDMPGTTRDAI------TVPFERNGQK 229 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L V LLID GV D + ++ Sbjct: 230 FELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYI 287 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + S + + K D + Q + + + S+ KR+G+E L K+ Sbjct: 288 LESGRSVVLGINKWDAVDDYQRQMLERSIETRLS--FLKFAPLHFISAQKRQGLEPLWKS 345 Query: 206 ILET 209 I++ Sbjct: 346 IIQA 349 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ G T+ + + + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGQGRQGKHEYIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + + V ++D R G+ D ++ ++L + Sbjct: 56 DTGGF----EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K E ++ L Y EV+P S+ +G+ L A L Sbjct: 112 KPTILVANKA---------EGMKDGVQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGL 162 Query: 210 IN 211 +N Sbjct: 163 LN 164 >gi|85373044|ref|YP_457106.1| GTP-binding protein EngA [Erythrobacter litoralis HTCC2594] gi|84786127|gb|ABC62309.1| predicted GTPase [Erythrobacter litoralis HTCC2594] Length = 485 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 72/190 (37%), Gaps = 22/190 (11%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +P P + GR NVGKS+L N LV +K LA + PG T+ + + Sbjct: 1 MPHHLKPTVIIIGRPNVGKSTLFNRLVGKK-LALVDDQPGVTRDRRM------GDAELAG 53 Query: 84 PAMALVDMPGYGYARAPKKNVDSW-GGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +VD G+ + DS G + + +ID R G+ +D+++ Sbjct: 54 MEFTVVDTAGWE-----DDDKDSLPGRMRAQTEVSLEGADAALFVIDARAGITPLDEEIA 108 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +L V +V K E L+ +Y + P S+ +GI L Sbjct: 109 RWLRTVEVPVVLVANKA---------EGKAGDAGLLESYALGLGDPAPVSAEHGEGIADL 159 Query: 203 RKAILETINY 212 + + I + Sbjct: 160 FEGLWPHIGH 169 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 7/185 (3%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 GP ++A GR N GKS+LIN L+ L T G T+ + Sbjct: 195 PLGPLKLAIVGRPNAGKSTLINRLLGEDRL-LTGPEAGITRDSISVDWQWTDPKSGEPRD 253 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G + ++ + V LL+D G++ D + S + Sbjct: 254 IRLIDTAGMRKRARVTEKLEKLS--VADAFRAVDFAEVVVLLLDATQGLEHQDLKIASKV 311 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLR 203 ++ + I + K D A + + + + S+ KG++ + Sbjct: 312 LEEGRALMIAINKWDI--AEDASYLFNGIRAALDEGLSQVRGLPLFAVSAKTGKGLDEML 369 Query: 204 KAILE 208 +A E Sbjct: 370 RAAFE 374 >gi|163856334|ref|YP_001630632.1| GTP-binding protein EngA [Bordetella petrii DSM 12804] gi|229710727|sp|A9IK66|DER_BORPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|163260062|emb|CAP42363.1| putative GTP-binding protein [Bordetella petrii] Length = 451 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 80/190 (42%), Gaps = 11/190 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+ LP ++A GR NVGKS+LIN L+ + + + PG T+ Sbjct: 174 APDAADLPPDHRIKLAIVGRPNVGKSTLINTLLGEERV-IAFDLPGTTRDAIEI------ 226 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + + L+D G + V+ + +++ L V L++D + V + Sbjct: 227 DFERDGRKYTLIDTAGLRRRGKVFEAVEKFS--VIKTLQAIEASNVVLLMLDAQTEVSEQ 284 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F+ + + + + K D L + + + +R + S++K + Sbjct: 285 DAHIAGFVLETGRAVVVAINKWDGLDIDQRERIEREFRRKLR--FLSFAPTHTISALKGQ 342 Query: 198 GIEVLRKAIL 207 GI+ + K+++ Sbjct: 343 GIKPVLKSVV 352 Score = 95.2 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 19/173 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L R A ++ G T+ + + + ++ Sbjct: 5 PVVALVGRPNVGKSTLFNRLT-RSRAALVADYSGLTRD------RHYGEGRVGDTPFIVI 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + + + V L+D R GV D ++ L K Sbjct: 58 DTGGFEPVAKTGILRE----MARQTRQAIAEADVVVFLVDARAGVNAHDHEIAQLLRKSG 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++ ++ T + P S+ GI L Sbjct: 114 QQRVVLA-----VNKAEGMGVGNATSEF---HELGLGTPYPISAAHGDGIVDL 158 >gi|218889917|ref|YP_002438781.1| GTP-binding protein EngA [Pseudomonas aeruginosa LESB58] gi|226741143|sp|B7UWJ2|DER_PSEA8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218770140|emb|CAW25902.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa LESB58] Length = 493 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + G T+ + ++P + + K L Sbjct: 194 EKDGIKIAIIGRPNVGKSTLVNRMLGEERV-IVYDQAGTTRD-SIYIPFERNEEKYTLID 251 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 A V G + K +V V+ L V ++D R GV + D ++ F+ Sbjct: 252 TAGVRRRGKIFEAVEKFSV-------VKTLQAIQDANVVIFVMDAREGVVEHDLNLLGFV 304 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I L K D A+ KT+ R ++ S++ G+ L K+ Sbjct: 305 LETGRALVIALNKWD--GMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHLYKS 362 Query: 206 ILET 209 + E+ Sbjct: 363 VQES 366 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + A + G T+ + + + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLT-KSRDAIVAEYAGLTRDRQY------GEARWQGRTYIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ +D+ + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI---SGDEEGIDA--KMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ K+D + P A+ P + +P ++ +GI + + Sbjct: 110 NKRSFLIANKVDTIDPDLARAEFS---------PLGLGDALPIAAAHGRGINHMLQE 157 >gi|52841177|ref|YP_094976.1| GTP-binding protein Era [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628288|gb|AAU27029.1| GTP-binding protein Era [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 311 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K L+ TS P T+H + + VD Sbjct: 24 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTE------GEFQFVYVDT 76 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A + +S + + L+D H K D+ V + + + V Sbjct: 77 PGIHQGNA----KAINRMMNKTAISVLRDVDVIAFLVDGTH-WKDEDEYVLNLIKQAKVP 131 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+DK++ T + L + + + Y A +IP S+ ++ L + + Sbjct: 132 CILVVNKVDKITDKT--QLLPWIEQISQRYQFAA--IIPLSAKTGLQVDELEGKLKNYL 186 >gi|256851011|ref|ZP_05556400.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 27-2-CHN] gi|260661223|ref|ZP_05862137.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 115-3-CHN] gi|282932036|ref|ZP_06337494.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 208-1] gi|256616073|gb|EEU21261.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 27-2-CHN] gi|260548160|gb|EEX24136.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 115-3-CHN] gi|281303803|gb|EFA95947.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 208-1] Length = 436 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 12/181 (6%) Query: 31 EIAF--SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 EIAF GR NVGKSS+IN ++ +K + +N G T+ D + + + Sbjct: 174 EIAFSVIGRPNVGKSSIINAMLGQKRV-IVANEEGTTRD-----AVDTPFVAEDGTKFRM 227 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L + +RS V L++D G+++ D+ V F Sbjct: 228 IDTAGIRRRGKVYEKTEKYSVLRAQAAIQRSD--VVCLVLDASTGIREQDKHVAGFAHDA 285 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKGIEVLRKAIL 207 IV+ K D L + + T+ + + + +I S+ K ++ L I Sbjct: 286 GRGMIIVVNKWD-LPKKDSNSAKDFTRVIREEFQYLDYAPIIFVSAKTGKNLDQLPDLIK 344 Query: 208 E 208 E Sbjct: 345 E 345 Score = 97.9 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 21/180 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A G+ NVGKS+L N ++N + LA + PG T+ N+ + Sbjct: 3 LPTVAIVGQPNVGKSTLFNRIINER-LAIVEDRPGVTRDRNYAKASWLG------HEFNI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ I + ++ + +D+ + L + Sbjct: 56 IDTGGITWEGGRIEDEIRAQADI-----AMEEADVIVMITSVALHLTDLDERIARILYRS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D E+ + Y + IP SS GI L A++E Sbjct: 111 SKPVILAVNKAD---------NPEQRADIYDFYSLGLGDPIPISSTHGTGIGDLLDAVVE 161 >gi|294675553|ref|YP_003576169.1| ribosome-associated GTPase EngA [Prevotella ruminicola 23] gi|294472941|gb|ADE82330.1| ribosome-associated GTPase EngA [Prevotella ruminicola 23] Length = 437 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 12/182 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G P A GR N GKSS+IN + ++ G T+ + F Sbjct: 172 EDGIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTDIAGTTRDSIYTRYDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEFYSVM--RSIRAIENSDVCVLMLDATRGIEAQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 K S +V+ K D + +QE ++ + IR P +I S++ ++ I + Sbjct: 283 QKNNKSLVVVVNKWDLVED-KSQEVIKTFENAIRKRMAPFVDFPIIFASALTKQRIYKVL 341 Query: 204 KA 205 + Sbjct: 342 ET 343 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 66/179 (36%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-KTRHAIVSDEAGTTRDRQY------GKCEWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ + +I+ V L D +GV D DV L + + Sbjct: 58 GGWVVNSDDVFEEEIRKQVIIAT----EEADLVLFLCDINNGVTGWDMDVAQILRRAKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D ++ ++ ++ Y + P S+ G L +LE + Sbjct: 114 VILVANKAD-----DGKDLYDQYEF----YKLGLGDPFPISAATGSGTGDLLDKVLEIL 163 >gi|209527936|ref|ZP_03276422.1| small GTP-binding protein [Arthrospira maxima CS-328] gi|209491626|gb|EDZ91995.1| small GTP-binding protein [Arthrospira maxima CS-328] Length = 453 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 19/197 (9%) Query: 21 IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 I LP + E +A GR NVGKSSL+N + ++ A S G T+ Sbjct: 162 IENLPASTDNEDSEELRVAIVGRPNVGKSSLLNTFLGQER-AIVSPISGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + +++N LVD G + + + +G I R V +ID GV Sbjct: 216 -DTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFG--INRAFKAIRRADVVLFVIDAVEGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTS 192 DQ + + + IV+ K D + + T+ + + ++R+ Y ++I S Sbjct: 273 TDQDQKLAGRISDDGRACVIVVNKWDAVEKDSY--TILEYEKVMRSRLYFLDWADMIFVS 330 Query: 193 SVKRKGIEVLRKAILET 209 ++ + +E + K + + Sbjct: 331 AMTGQRVEKIFKLVDKA 347 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 19/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L+N L ++ A + PG T+ + + + Sbjct: 2 SRPIVAIIGRPNVGKSTLVNRLTQTQD-AIVHDQPGMTRD------RTYRSAYWQDREFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G + + + + + L + L++D + G D+ + S+L + Sbjct: 55 VVDTGGLVF----DDDTEFLPLIREQALMALAEATAAILVVDGQTGPTGGDEAIASWLRQ 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + V + + K + + + + P SS+ G L A++ Sbjct: 111 QKVPILLAVNKC--------ESPTQGLTQAAQFWELGLGNPFPISSIHGSGTGELLDALI 162 Query: 208 ETI 210 E + Sbjct: 163 ENL 165 >gi|166030917|ref|ZP_02233746.1| hypothetical protein DORFOR_00598 [Dorea formicigenerans ATCC 27755] gi|166029184|gb|EDR47941.1| hypothetical protein DORFOR_00598 [Dorea formicigenerans ATCC 27755] Length = 442 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A G+ NVGKSS+IN L+ + + S+ G T+ + + +N Sbjct: 174 EDSRPRVAIVGKPNVGKSSIINKLLGEQRV-IVSDIAGTTRDAI------DTEIVHNGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ V ++ID GV + D V Sbjct: 227 YVFIDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDATQGVTEQDAKVAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 ++ IV+ K D + +T+ + + +R + P E++ S+V + + + Sbjct: 285 HERGKGVIIVVNKWDAIEKND--KTMREYENEVRRVLSFMPYAEIMYVSAVTGQRLPKMF 342 Query: 204 KAI 206 I Sbjct: 343 DMI 345 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K ++ + PG T+ + +++ L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGEK-ISIVKDTPGVTRDRIY------ADVSWLDKDFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ + + T + + D + G+ D V L + Sbjct: 57 DTGGI----EPESKDIILSQMREQAQIAIDTSDVIIFITDVKQGLVDSDSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D Y + +P S+ R G+ + ++E Sbjct: 113 KPVILVVNKVDNFDK--------YMADTYEFYNLGIGDPVPISASSRLGLGDMLDKVIEH 164 >gi|59711240|ref|YP_204016.1| GTP-binding protein EngA [Vibrio fischeri ES114] gi|197336109|ref|YP_002155390.1| ribosome-associated GTPase EngA [Vibrio fischeri MJ11] gi|81311005|sp|Q5E768|DER_VIBF1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238690264|sp|B5FAX6|DER_VIBFM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|59479341|gb|AAW85128.1| predicted GTP-binding protein [Vibrio fischeri ES114] gi|197317599|gb|ACH67046.1| ribosome-associated GTPase EngA [Vibrio fischeri MJ11] Length = 500 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 70/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ Sbjct: 207 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMEREGQE 259 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +++ L V L+ID R + D + F Sbjct: 260 YVLIDTAGVRRRGRINETVEKFS--VIKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 317 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L ++ + + + S++ G+ L ++ Sbjct: 318 LNAGRSLVIAVNKWDGLDNDVKEKVKSELDRRLG--FVDFARIHFISALHGTGVGHLYES 375 Query: 206 ILET 209 + E Sbjct: 376 VQEA 379 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K L Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAKLEEQEFIL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEQGVET--KMAEQSLAAIEEADVVLFMVDGRAGLTSADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID + A + +V ++ +G+ L + Sbjct: 110 EKPTFLVVNKIDGIDADAASA---------EFWQLGMNKVYQIAASHGRGVTSLLE 156 >gi|323491635|ref|ZP_08096814.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546] gi|323314211|gb|EGA67296.1| GTP-binding protein Der [Vibrio brasiliensis LMG 20546] Length = 494 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 202 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 255 YVLIDTAGVRRRTRINETVEKFS--VVKTLKAVEDANVVMLVIDARENISDQDLSLLGFA 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L ++ ++ + + S++ G+ L ++ Sbjct: 313 LNAGRSIVIAVNKWDGLDMDVKEQVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 370 Query: 206 ILET 209 + E Sbjct: 371 VQEA 374 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 12/143 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + S L K Sbjct: 55 IDTGGI---DGTEEGVET--KMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIASHLRKI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETL 171 +V+ K+D + A Sbjct: 110 EKPSMLVVNKVDGIDADAASAEF 132 >gi|52424789|ref|YP_087926.1| GTP-binding protein EngA [Mannheimia succiniciproducens MBEL55E] gi|52306841|gb|AAU37341.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 507 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N ++ + + PG T+ + ++ + ++D Sbjct: 220 KIAIVGRPNVGKSTLTNRILGEDRVV-VYDLPGTTRDSVYI------PMERDGQQYTIID 272 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +V+ + +++ L V L +D R G+ D + F+ Sbjct: 273 TAGVRKRGKVHLSVEKFS--VIKTLQAIQDANVVLLTVDAREGISDQDLSLLGFILNAGR 330 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 S IV+ K D LS T + + + V S++ G+ L ++ E Sbjct: 331 SLVIVVNKWDGLSQYTKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDSVQEA 387 Score = 97.5 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 22/179 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + ++ Sbjct: 4 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHAN------ISGYDFIVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK- 148 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 57 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLTPADIGIAQYLRQRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + + Y E+ ++ + +G+ L + +L Sbjct: 112 NKITVVVANKTDGIDADS---------HCAEFYQLGLGEIAQIAASQGRGVTQLMEDVL 161 >gi|323499818|ref|ZP_08104777.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326] gi|323315059|gb|EGA68111.1| GTP-binding protein Der [Vibrio sinaloensis DSM 21326] Length = 494 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 203 QDQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 255 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V L+ID R + D + F Sbjct: 256 YVLIDTAGVRRRTRINETVEKFS--VVKTLKAVEDANVVMLVIDARENISDQDLSLLGFA 313 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D L + ++ + + S++ G+ L ++ Sbjct: 314 LNAGRSIVIAVNKWDGLDTDVKEHVKKELDRRLG--FVDFARIHFISALHGTGVGHLFES 371 Query: 206 ILET 209 + E Sbjct: 372 VQEA 375 Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 12/143 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V ++D R G+ D+ + L K Sbjct: 55 IDTGGI---DGTEEGVET--KMAQQSLAAIDEADVVLFMVDGRAGLTAADEAIAQHLRKL 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETL 171 +V+ K+D + A Sbjct: 110 EKPSMLVVNKVDGIDADAASAEF 132 >gi|170761539|ref|YP_001788258.1| GTP-binding protein Era [Clostridium botulinum A3 str. Loch Maree] gi|226741201|sp|B1KZM3|ERA_CLOBM RecName: Full=GTPase Era gi|169408528|gb|ACA56939.1| GTP-binding protein Era [Clostridium botulinum A3 str. Loch Maree] Length = 296 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ K L+ S P T++ + + + + VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTE------DNYQLVFVDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ + V LI+ + D + L + V Sbjct: 60 PGIHKPK-----HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVKVP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + I Sbjct: 115 VFLVLNKIDENPQEKVAETLKTYSELME-----FEEIIPISALKGKNIDLLKELMFKYI 168 >gi|148656306|ref|YP_001276511.1| GTP-binding protein Era [Roseiflexus sp. RS-1] gi|148568416|gb|ABQ90561.1| GTP-binding protein Era [Roseiflexus sp. RS-1] Length = 451 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 30/198 (15%) Query: 24 LPKAG---PPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 LP A PE +A GR NVGKS+L+N L+ +K +A S P T+ + Sbjct: 148 LPPATRPMMPEGPHRSGFVALVGRPNVGKSTLLNALLGQK-VAIVSPKPQTTRTAIRGI- 205 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG-LIVRYLSERSTLRCVYLLIDCRH 132 L + VD PG + + G ++ + V +++D Sbjct: 206 -----LSRPDAQIVFVDTPGI------HEPRNRLGAYMVKQARRAIPDADVVCMVVDISR 254 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +D+ + + + K +VL KID L + E L+ + + + + S Sbjct: 255 PPGSLDERIAALVRKAQARRMLVLNKID-LPTRSGNEHLQAYR-ALAPWDME----VAVS 308 Query: 193 SVKRKGIEVLRKAILETI 210 +++ +G++ L I+ + Sbjct: 309 ALRGQGLDALVDEIVRLL 326 >gi|299530502|ref|ZP_07043922.1| GTP-binding protein EngA [Comamonas testosteroni S44] gi|298721478|gb|EFI62415.1| GTP-binding protein EngA [Comamonas testosteroni S44] Length = 446 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A +GR N GKS+LIN + + L + PG T+ + N Sbjct: 177 DQKPVRLAVAGRPNAGKSTLINTWLGEERLV-AFDMPGTTRDAI------TVPFERNGQK 229 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L V LLID GV D + ++ Sbjct: 230 FELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIEGANVVLLLIDATQGVTDQDAHIAGYI 287 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + S + + K D + Q + + + S+ KR+G+E L K+ Sbjct: 288 LESGRSVVLGINKWDAVDDYQRQMLERSIETRLS--FLKFAPLHFISAQKRQGLEPLWKS 345 Query: 206 ILET 209 I++ Sbjct: 346 IIQA 349 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ G T+ + + + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGQGRQGKHEYIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + + V ++D R G+ D ++ ++L + Sbjct: 56 DTGGF----EPDASRGIFKEMAKQTQQAVAEADVVIFVLDARAGLSGQDHEIGNYLRRLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K E ++ L Y EV+P S+ +G+ L A L Sbjct: 112 KPTILVANKA---------EGMKDGVQLSEFYELGLGEVVPVSAAHGQGVRSLVDAALGL 162 Query: 210 IN 211 +N Sbjct: 163 LN 164 >gi|302878616|ref|YP_003847180.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans ES-2] gi|302581405|gb|ADL55416.1| ribosome-associated GTPase EngA [Gallionella capsiferriformans ES-2] Length = 470 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 72/174 (41%), Gaps = 11/174 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + PP++A GR NVGKS+L+N ++ + + + PG T+ + + + + Sbjct: 175 EDKPPKLAIVGRPNVGKSTLVNAILGEQRV-IAFDQPGTTRDSIYI------DFERDGKQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ ++ + +++ + V L++D R + + D V F+ Sbjct: 228 YTIIDTAGVRRRGKVEEAIEKFS--VIKTMQAIEDANVVVLVVDARDQITEQDAHVADFV 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + + + K D L + + + A I S++ GI Sbjct: 286 LQAGRALVLAVNKWDGLDNHQREMVKSDIERKLHFLGFAKRHYI--SALNGNGI 337 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 26/183 (14%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 LPTLVLVGRPNVGKSTLFNRLTRSRD-ALVADQPGLTRD------RHYGRGRVGERPYLV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERS---TLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G G + R V L+D R G D + + L Sbjct: 55 VDTGGLEPVAKD-------GIMFEMARQSRQAVDEADVVLFLVDGRAGCTPQDLIIATQL 107 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 K +++ K E + + + + E P SS + + + Sbjct: 108 RKTGKPILLLVNKA---------EGMARARVTAEFFELGLGEPYPISSAHGDNVVEVIEI 158 Query: 206 ILE 208 LE Sbjct: 159 ALE 161 >gi|297205894|ref|ZP_06923289.1| ribosome-associated GTPase EngA [Lactobacillus jensenii JV-V16] gi|297149020|gb|EFH29318.1| ribosome-associated GTPase EngA [Lactobacillus jensenii JV-V16] Length = 439 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 12/181 (6%) Query: 31 EIAF--SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 EIAF GR NVGKSS+IN ++ +K + +N G T+ D + + + Sbjct: 177 EIAFSVIGRPNVGKSSIINAMLGQKRV-IVANEEGTTRD-----AVDTPFVAEDGTKFRM 230 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L + +RS V L++D G+++ D+ V F Sbjct: 231 IDTAGIRRRGKVYEKTEKYSVLRAQAAIQRSD--VVCLVLDASTGIREQDKHVAGFAHDA 288 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKGIEVLRKAIL 207 IV+ K D L + + T+ + + + +I S+ K ++ L I Sbjct: 289 GRGMIIVVNKWD-LPKKDSNSAKDFTRVIREEFQYLDYAPIIFVSAKTGKNLDQLPDLIK 347 Query: 208 E 208 E Sbjct: 348 E 348 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 21/180 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A G+ NVGKS+L N ++N + LA + PG T+ N+ + Sbjct: 6 LPTVAIVGQPNVGKSTLFNRIINER-LAIVEDRPGVTRDRNYAKASWLG------HEFNI 58 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ I + ++ + +D+ + L + Sbjct: 59 IDTGGITWEGGRIEDEIRAQADI-----AMEEADVIVMITSVALHLTDLDERIARILYRS 113 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D E+ + Y + IP SS GI L A++E Sbjct: 114 SKPVILAVNKAD---------NPEQRADIYDFYSLGLGDPIPISSTHGTGIGDLLDAVVE 164 >gi|257093699|ref|YP_003167340.1| GTP-binding protein EngA [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046223|gb|ACV35411.1| small GTP-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 492 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 78/200 (39%), Gaps = 19/200 (9%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + P++ ++A GR NVGKS+LIN L+ + + PG T+ Sbjct: 164 AEAVESEPESDVVKVAIVGRPNVGKSTLINALLGEDRV-IAFDQPGTTRDAI------EV 216 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + L+D G + ++ + +++ L + V L++D R + + Sbjct: 217 DFERGGKKYTLIDTAGLRRRGRVFETIEKFS--VIKTLQAVEDAQVVILVLDARQDIAEQ 274 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + +F+ + + + + K D L ++ + + S+++ + Sbjct: 275 DAHIAAFIRESGRALVVAVNKWDGLDSYVREQIKGALEGQLG--FIDFARFHYVSALRGQ 332 Query: 198 GIEVL--------RKAILET 209 G+E L R AI + Sbjct: 333 GLEPLFRSVDAAYRAAIADL 352 Score = 98.7 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L N L ++ A ++ PG T+ + + + K ++D Sbjct: 5 IVLVGRPNVGKSTLFNRLTRTRD-ALVADLPGLTRD------RHYGHGKLGSKPYLVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ + + V L++D R G+ +D+++ + L K Sbjct: 58 GGFEPLAKDG----IMYHMARQTEQAIDEADVVILVVDGRSGLTALDKEIANRLRKVDRP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K + +S + + E + S+ +G+ L LE Sbjct: 114 VLVAVNKSEGMSVGVV---------VSDFHELGLGEPLAISAAHGEGVRALIDLALE 161 >gi|127512226|ref|YP_001093423.1| GTP-binding protein EngA [Shewanella loihica PV-4] gi|166225856|sp|A3QCG6|DER_SHELP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|126637521|gb|ABO23164.1| small GTP-binding protein [Shewanella loihica PV-4] Length = 489 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ + L+ + Sbjct: 196 QDLPIKLAIIGKPNVGKSTLTNRILGEERVV-VYDEPGTTRDSIYI------PLERDGQE 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + V+ + +++ L V L++D R G+ + D + F Sbjct: 249 YVIIDTAGVRRRSKVHETVEKFS--VIKTLKAVEDANVVLLVVDAREGIAEQDLGLLGFA 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + + S++ G+ L ++ Sbjct: 307 LNVGRALVIAVNKWDGIDQDVKERVKSELDRRLG--FIDFARIHFISALHGTGVGHLFES 364 Query: 206 ILET 209 + E Sbjct: 365 VEEA 368 Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADYPGLTRDRKY------GRAHLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V L D R G+ D+ + L ++ Sbjct: 55 VDTGGI---DGTEEGIET--RMAEQSLAAIEEADVVLFLTDARAGLTAADEAIAEHLRRR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 EKTTFVVANKVDGID 124 >gi|296387686|ref|ZP_06877161.1| GTP-binding protein EngA [Pseudomonas aeruginosa PAb1] Length = 493 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + G T+ + ++P + + K L Sbjct: 194 EKDGIKIAIIGRPNVGKSTLVNRMLGEERV-IVYDQAGTTRD-SIYIPFERNEEKYTLID 251 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 A V G + K +V V+ L V ++D R GV + D ++ F+ Sbjct: 252 TAGVRRRGKIFEAVEKFSV-------VKTLQAIQDANVVIFVMDAREGVVEHDLNLLGFV 304 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I L K D A+ KT+ R ++ S++ G+ L K+ Sbjct: 305 LETGRALVIALNKWD--GMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHLYKS 362 Query: 206 ILET 209 + E+ Sbjct: 363 VQES 366 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 67/177 (37%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + A + G T+ + + + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLT-KSRDAIVAEYAGLTRDRQY------GEARWQGRTYIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ +D+ + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI---SGDEEGIDA--KMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K+D + P A+ P + +P ++ +GI + + Sbjct: 110 NKRSFLVANKVDTIDPDLARAEFS---------PLGLGDALPIAAAHGRGINHMLQE 157 >gi|126658269|ref|ZP_01729419.1| GTP-binding protein EngA [Cyanothece sp. CCY0110] gi|126620418|gb|EAZ91137.1| GTP-binding protein EngA [Cyanothece sp. CCY0110] Length = 452 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 74/197 (37%), Gaps = 13/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + +P LP ++ GR NVGKSSL+N + + A S G T+ Sbjct: 162 ITYLPSPDELPDREEINVSIIGRPNVGKSSLLNAFLGEQR-AIVSPISGTTRDTI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ L+D G + + + I R V L+ID GV Sbjct: 216 -DTVVERGENTYRLIDTAGIRRKKNVNYGAEFFS--INRAFKAIRRADVVLLVIDAIDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D + + + + IV+ K D + + K + + R Y ++I S++ Sbjct: 273 TDQDIKLADRIIDEGRAAIIVVNKWDAVEKDSYTIYEYKQRVMDRLYFMEWADIIFVSAM 332 Query: 195 KRKGIEVLRKAILETIN 211 K +E I E ++ Sbjct: 333 SGKRVE----NIFELVD 345 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A + PG T+ + + + Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLA-KDRQAIVHDQPGITRD------RTYRPAFWRDRDFQV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + ++ + ++D + G D+++ +L ++ Sbjct: 56 VDTGGLVF----DDDTEFLPLIREQAMAALTEASAAIFVVDGQLGPTAGDREISDWLRRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + + + E P S + G L ++ Sbjct: 112 QVPVLLAVNKC--------ESPEQGLMQAAEFWELGLGEPYPISGIHGSGTGELLDELIT 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|124267181|ref|YP_001021185.1| GTP-binding protein EngA [Methylibium petroleiphilum PM1] gi|166225824|sp|A2SHB1|DER_METPP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|124259956|gb|ABM94950.1| putative GTP-binding protein EngA [Methylibium petroleiphilum PM1] Length = 446 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 12/207 (5%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 ++ T + F P+ L P +A +GR NVGKS+LIN + + L + P Sbjct: 153 RSLLTAALEDFAFDEPDDLALDDPERPIRLAVAGRPNVGKSTLINTWLGEERLV-AFDLP 211 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLR 122 G T+ + N L+D G ++++ + +V+ L + Sbjct: 212 GTTRDAI------SVPFERNGQKFELIDTAGLRRKGKVFESIEKFS--VVKTLQAIADAN 263 Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 V LL+D GV D + ++ + + + K D + + + + Sbjct: 264 VVLLLLDATQGVTDQDAHIAGYILDSGRAVVLAVNKWDAVDSYQRELLQRSIEQRLA--F 321 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILET 209 V+ S++KR+G+ + KAI + Sbjct: 322 LKFAPVLHISAIKRQGLGPVWKAIADA 348 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 65/179 (36%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + A ++ G T+ + + + + +V Sbjct: 3 PVLALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGDGRLGEREFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + V ++D R GV D D+ +L Sbjct: 56 DTGGF----EPTAESGIYKEMAKQTRQAVAESDVVIFVVDVRAGVTGQDHDIARYLRTAG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + K E + + L Y E + SS +GI L A LE Sbjct: 112 KKVLLAANKA---------EGMLEGIQLAEFYELGMGEPLAVSSAHGQGIRSLLTAALE 161 >gi|296113385|ref|YP_003627323.1| GTP-binding protein EngA [Moraxella catarrhalis RH4] gi|295921079|gb|ADG61430.1| GTP-binding protein EngA [Moraxella catarrhalis RH4] gi|326559230|gb|EGE09661.1| GTP-binding protein EngA [Moraxella catarrhalis 46P47B1] gi|326559869|gb|EGE10269.1| GTP-binding protein EngA [Moraxella catarrhalis 7169] gi|326569645|gb|EGE19697.1| GTP-binding protein EngA [Moraxella catarrhalis BC1] gi|326570126|gb|EGE20171.1| GTP-binding protein EngA [Moraxella catarrhalis BC8] gi|326570864|gb|EGE20888.1| GTP-binding protein EngA [Moraxella catarrhalis BC7] gi|326574414|gb|EGE24356.1| GTP-binding protein EngA [Moraxella catarrhalis 101P30B1] gi|326576405|gb|EGE26314.1| GTP-binding protein EngA [Moraxella catarrhalis O35E] Length = 472 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 11/172 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L+N L+ + + PG T+ + + + L+D Sbjct: 181 KLAIIGRPNVGKSTLVNRLLGEDRVV-VFDMPGTTRDSIYI------PFEREGRSYVLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + +V+ L V L+ID + G+ D + + Sbjct: 234 TAGVRRRGRIDEKVEKFS--VVKTLQAIKDANVVVLVIDAKEGIVDQDLHMLGYALDAGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + K D LS Q+ K + R ++ S++ G+ L Sbjct: 292 AIVVAINKWDGLSQD--QKDFVKIEIDRRFNFVPWVKIHLISALYGNGVGKL 341 Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 29/182 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + A ++ G T+ + + + +V Sbjct: 5 PVVALIGRPNVGKSTLFNQLT-KSRQALVADLAGLTRDRQY------GDAHFENKSFIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G G +D G I Y++ +S V ++D R G+ D ++ F Sbjct: 58 DTGGIG-------EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHF 110 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L +V K+D + E + E T++ +G+ L + Sbjct: 111 LHTLGKPVFLVANKMDGVHEAAYAE----------FFALGFGEPYATAASHGRGVTNLLE 160 Query: 205 AI 206 ++ Sbjct: 161 SL 162 >gi|323703070|ref|ZP_08114725.1| ribosome-associated GTPase EngA [Desulfotomaculum nigrificans DSM 574] gi|323531964|gb|EGB21848.1| ribosome-associated GTPase EngA [Desulfotomaculum nigrificans DSM 574] Length = 442 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 17/189 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IA GR NVGKSSL+N ++ + + SN PG T+ S + N + Sbjct: 173 PPDTIRIAVIGRPNVGKSSLVNAILGEERV-IVSNIPGTTRDAI------DSPFERNGKS 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G + + +VR L +L+D GV + D+ + + Sbjct: 226 YVIVDTAGMRRRNRIDLPAERYS--VVRALRAIDRCDVALMLLDATEGVTEQDKRIVGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 +K + +V+ K D + +T+ K + IR ++ + S++ ++ + Sbjct: 284 HEKGKAIILVVNKWDLIEKDD--KTMNKFEKKIREELSFLSYAPTLYISALTKQRVPK-- 339 Query: 204 KAILETINY 212 +LE +++ Sbjct: 340 --VLEMVDF 346 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 65/182 (35%), Gaps = 22/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS L N +V +A + PG T+ + + + LV Sbjct: 4 PIVAIVGRPNVGKSMLFNRIVG-SRIAIVEDMPGVTRDRLY------QDAEWQGREFTLV 56 Query: 90 DMPGYGYAR-APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G +A + L +R V ++D R G+ D++V L Sbjct: 57 DTGGLDFAEDVITSQIRKQAELAMR------EADAVIFVVDARAGLTTTDEEVAKVLRLT 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + K+ Q L K Y Y + IP S+ + L +++ Sbjct: 111 DKPVLLAANKV-------EQFDLAKIPYY-DFYRLGLGDPIPISAAEGLNTGDLLDELVK 162 Query: 209 TI 210 + Sbjct: 163 LL 164 >gi|77919006|ref|YP_356821.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380] gi|77545089|gb|ABA88651.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380] Length = 303 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A TSN P T++ + + +D Sbjct: 16 VAIIGRPNVGKSTLLNSVLGQK-IAITSNKPQTTRNRILGIYN------QPDAQVLFLDT 68 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A+ ++ + LS + V +L++ + D V + + V Sbjct: 69 PGVHKAKG-----MLNRYMVDQALSTCGDVDVVLMLVEANDRLGGGDDYVLEQVSRSNVP 123 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D + +E A E+IP S++ +G E L ++++ + Sbjct: 124 VILVINKVDLIHRPELLPLIEAY-----TGKYAFSEIIPVSALTGEGTEQLVSSLVKYL 177 >gi|85707619|ref|ZP_01038685.1| predicted GTPase [Erythrobacter sp. NAP1] gi|85689153|gb|EAQ29156.1| predicted GTPase [Erythrobacter sp. NAP1] Length = 475 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++ GR NVGKS+L N LV +K LA + PG T+ + + +V Sbjct: 3 PQVIIIGRPNVGKSTLFNRLVGKK-LALVDDQPGVTRDRRM------GDAEIAGLKFTIV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + G + + + ++D R G+ +D+++ +L + Sbjct: 56 DTAG----WEDEDELTLPGRMRKQTEASLEGADAALFVVDARAGLTPLDEEIARYLREHD 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 V +V K E ++ Y E + S+ +GI L Sbjct: 112 VPIVLVANKA---------EGSAGESGVLEAYSLGFGEPLAVSAEHGEGIADL 155 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 7/182 (3%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 GP ++A GR N GKS+LIN L+ L T G T+ + Sbjct: 185 PLGPLKLAIVGRPNAGKSTLINRLLGEDRL-LTGPEAGITRDSIAIDWEWTDPKSGETRE 243 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G R + ++ + V LL+D G++ D + S Sbjct: 244 IRLIDTAGMRKKRNVVEKIEKLS--VADARRAVDFAEVVVLLLDATQGLEHQDLKIASLA 301 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLR 203 ++ + + + K D A K + + V+ S+ KG++ + Sbjct: 302 LEEGRALMVAINKWD--VAEEASSLFNGIKQALHDGLAQVRGLPVLSVSAKTGKGLDAML 359 Query: 204 KA 205 A Sbjct: 360 GA 361 >gi|15598994|ref|NP_252488.1| GTP-binding protein EngA [Pseudomonas aeruginosa PAO1] gi|107103319|ref|ZP_01367237.1| hypothetical protein PaerPA_01004388 [Pseudomonas aeruginosa PACS2] gi|152985588|ref|YP_001346699.1| GTP-binding protein EngA [Pseudomonas aeruginosa PA7] gi|254236703|ref|ZP_04930026.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254242490|ref|ZP_04935812.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|313109217|ref|ZP_07795185.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa 39016] gi|26006739|sp|Q9HXJ8|DER_PSEAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166225840|sp|A6V0W4|DER_PSEA7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|9949972|gb|AAG07186.1|AE004798_9 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|126168634|gb|EAZ54145.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126195868|gb|EAZ59931.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|150960746|gb|ABR82771.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] gi|310881687|gb|EFQ40281.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa 39016] Length = 493 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + G T+ + ++P + + K L Sbjct: 194 EKDGIKIAIIGRPNVGKSTLVNRMLGEERV-IVYDQAGTTRD-SIYIPFERNEEKYTLID 251 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 A V G + K +V V+ L V ++D R GV + D ++ F+ Sbjct: 252 TAGVRRRGKIFEAVEKFSV-------VKTLQAIQDANVVIFVMDAREGVVEHDLNLLGFV 304 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I L K D A+ KT+ R ++ S++ G+ L K+ Sbjct: 305 LETGRALVIALNKWD--GMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHLYKS 362 Query: 206 ILET 209 + E+ Sbjct: 363 VQES 366 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + A + G T+ + + + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLT-KSRDAIVAEYAGLTRDRQY------GEARWQGRTYIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ +D+ + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI---SGDEEGIDA--KMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ K+D + P A+ P + +P ++ +GI + + Sbjct: 110 NKRSFLIANKVDTIDPDLARAEFS---------PLGLGDALPIAAAHGRGINHMLQE 157 >gi|332300532|ref|YP_004442453.1| GTP-binding protein engA [Porphyromonas asaccharolytica DSM 20707] gi|332177595|gb|AEE13285.1| GTP-binding protein engA [Porphyromonas asaccharolytica DSM 20707] Length = 436 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 12/177 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P A GR N GKSSL+N L+ + ++ G T+ F F+ Sbjct: 171 PLLELPRFAIVGRPNAGKSSLLNALIGEERN-IVTDRSGTTRDSIFAEYDKFNQH----- 224 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + +LID G++ D ++F Sbjct: 225 -FYLVDTAGIRKKGKVNEDLEYYS--VIRAIRAIENADVCIMLIDATRGIEAQDANIFRV 281 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + + + K D + Q T+E+ R P +I S++ ++ I Sbjct: 282 IQRNNKGLVVCVNKWDLVEDKSMPVQRTMEEAIRA-RFAPFTDFPIIFISALNKQRI 337 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L R A + G T+ + ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-RSRQAIVTEEAGTTRDRQYGHVTWCE------RTFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ + + + ++D +GV +D ++ L + Sbjct: 58 GGWVLRSDDVFEEEINKQVR----IAVEEADLILFVVDILNGVTDLDDEIALMLRQTNKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D + Y + P S++ L ILE + Sbjct: 114 VILVANKAD---------NFTQHNDAAEFYTLGIGDPYPISAINGSSTGDLLDHILELL 163 >gi|294791776|ref|ZP_06756924.1| ribosome-associated GTPase EngA [Veillonella sp. 6_1_27] gi|294793637|ref|ZP_06758774.1| ribosome-associated GTPase EngA [Veillonella sp. 3_1_44] gi|294455207|gb|EFG23579.1| ribosome-associated GTPase EngA [Veillonella sp. 3_1_44] gi|294457006|gb|EFG25368.1| ribosome-associated GTPase EngA [Veillonella sp. 6_1_27] Length = 444 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 11/178 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A GR NVGKSSL N L+ + + S+ G T+ + +N Sbjct: 175 DEDTIHVAIIGRPNVGKSSLTNALLGQDRV-IVSDVAGTTRD----SIDTYWTHENQ--K 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + IVR L V L++D + GV + D+ + + Sbjct: 228 FVLIDTAGMRRKSKIEEAVERYS--IVRSLRSVDRADIVVLVLDAQDGVTEQDKKIAGYA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVL 202 + IV+ K D + + TL T+ + ++ S++ ++ I L Sbjct: 286 YEAGKGVVIVVNKWDLVEKDD-KTTLRFTEDIYDELGFLQFAPILFASALTKQRIHRL 342 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 18/175 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN K ++ + PG T+ +F + + ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVN-KRISIVEDIPGVTRDRIYF------DAEWLNREFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L + ++D + G+ D++V + L Sbjct: 57 DTGGIEFITDNSHVIPKMMRLQAE--LAIEEADVILFVVDGKQGIVPADEEVANILRASG 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID ++ + Y + I S+ + L Sbjct: 115 KPVVLVVNKIDSVNQEP---------NIYEFYNLGLGDPIGISAKNLMNLGDLLD 160 >gi|282848929|ref|ZP_06258319.1| ribosome-associated GTPase EngA [Veillonella parvula ATCC 17745] gi|282581434|gb|EFB86827.1| ribosome-associated GTPase EngA [Veillonella parvula ATCC 17745] Length = 444 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 11/178 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A GR NVGKSSL N L+ + + S+ G T+ + +N Sbjct: 175 DEDTIHVAIIGRPNVGKSSLTNALLGQDRV-IVSDVAGTTRD----SIDTYWTHENQ--K 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + IVR L V L++D + GV + D+ + + Sbjct: 228 FVLIDTAGMRRKSKIEEAVERYS--IVRSLRSVDRADIVVLVLDAQDGVTEQDKKIAGYA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVL 202 + IV+ K D + + TL T+ + ++ S++ ++ I L Sbjct: 286 YEAGKGVVIVVNKWDLVEKDD-KTTLRFTEDIYDELGFLQFAPILFASALTKQRIHRL 342 Score = 107 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 18/175 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN K ++ + PG T+ +F + + ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVN-KRISIVEDIPGVTRDRIYF------DAEWLNREFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L + ++D + G+ D++V + L Sbjct: 57 DTGGIEFITENSHVIPKMMRLQAE--LAIEEADVILFVVDGKQGIVPADEEVANILRASG 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID ++ + Y + I S+ + L Sbjct: 115 KPVVLVVNKIDSVNQEP---------NIYEFYNLGLGDPIGISAKNLMNLGDLLD 160 >gi|326203513|ref|ZP_08193377.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782] gi|325986333|gb|EGD47165.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782] Length = 298 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N + +K +A S+ P T++ V N + L+D Sbjct: 8 VSVIGRPNVGKSTLLNTITGQK-IAIMSDKPQTTRNTIRGVIT------NKECQLILIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ + V L++ D ++ L + Sbjct: 61 PGIHKPK-----TKLGEYMVNVASETIKEVDLVLFLVEANAQPGAQDINIIQQLKQVKTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++L K+D +S ++ L+ +IP S++K GI+++ K L+ I Sbjct: 116 VFLILNKVDLVSKEKLLAIIDSYSKLMN-----FKAIIPISALKNDGIDIILKEALDLI 169 >gi|27262166|gb|AAN87364.1| GTP-binding protein [Heliobacillus mobilis] Length = 445 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 79/189 (41%), Gaps = 17/189 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +IA G+ NVGKSS++N ++ + + SN PG T+ + + Sbjct: 177 DPDTIKIAVIGKPNVGKSSMVNAILGEERV-IVSNIPGTTRDAI------DTPFEREGKH 229 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++V+ + + R L V ++ID GV + D+ + + Sbjct: 230 YVLIDTAGMRRKGKIDESVERYSVM--RSLRAVDRSDVVLMVIDASQGVTEQDKKIAGYA 287 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + + +VL K D + +T+ + ++R+ + I S++ + + Sbjct: 288 HEAGKACVLVLNKWDLVPKDD--KTMNRFDKVVRSELGFLNYAPTIYVSALTGQRLPK-- 343 Query: 204 KAILETINY 212 ILE +++ Sbjct: 344 --ILELVDF 350 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 19/185 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A GR NVGKS+L N L + +A + PG T+ + N K Sbjct: 3 PMAKPIVAVVGRPNVGKSTLFNRLTGGR-VAIVEDRPGVTRDRLY------RNAKWLNRE 55 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G + + ++E + ++D + G+ D+ V + L Sbjct: 56 FTLVDTGGLEFGADGNPFSEVIYKQAEAAIAE---ADVILFMVDGKAGITADDETVAAVL 112 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V+ KI E + + + IP S+ L A Sbjct: 113 RRTKKPVFLVVNKI---------EDFSQRDKYYEFFALGLGDPIPISATHGMNTGDLLDA 163 Query: 206 ILETI 210 ++E + Sbjct: 164 VIEAL 168 >gi|94986202|ref|YP_605566.1| GTP-binding protein EngA [Deinococcus geothermalis DSM 11300] gi|166198711|sp|Q1IWI7|DER_DEIGD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|94556483|gb|ABF46397.1| Small GTP-binding protein domain [Deinococcus geothermalis DSM 11300] Length = 441 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 69/181 (38%), Gaps = 24/181 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL N LV R+ A ++ PG T+ + + + + LVD Sbjct: 3 KVAIVGRPNVGKSSLFNRLVGRRE-AVVADFPGVTRDAKEGL------MLYHNHRIVLVD 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G D W I + V ++D R G+ D +V +L + Sbjct: 56 TGGLWSG-------DEWEQAIREKAEWAMEGAQAVIFVVDPREGLTAADYEVADWLRRLG 108 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + KID YL + + + S+ +G++ L + ++ Sbjct: 109 KPVIVAANKIDSPKHDV---------YLAELWGLGFGDPVAISAEHARGLDDLMERVMAH 159 Query: 210 I 210 + Sbjct: 160 L 160 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 74/192 (38%), Gaps = 21/192 (10%) Query: 21 IGLLP--KAGPPEIA-----FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP + PE+A GR NVGKSSL+N + + A ++ PG T+ Sbjct: 157 MAHLPADEEDVPEVAPIRISLIGRPNVGKSSLLNAIT-QSERAIVADQPGTTRDSL---- 211 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 LVD G + P ++ + ERS + ++L+++ Sbjct: 212 --DVEWNYGGQRFVLVDTAGIR--KKPDTAIEEYAIQRSEAAIERSDI--IWLVVNAT-E 264 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 + + + + +V+ K D + ++T ++ + + A+ + TS+ Sbjct: 265 IGDHELKLANLAYDSGKPVIVVVNKWDLVPDEALKQTEKELNQKL--HHIAYAPRVYTSA 322 Query: 194 VKRKGIEVLRKA 205 + GI + Sbjct: 323 INDYGIHDMLAE 334 >gi|315652502|ref|ZP_07905486.1| GTP-binding protein Era [Eubacterium saburreum DSM 3986] gi|315485218|gb|EFU75616.1| GTP-binding protein Era [Eubacterium saburreum DSM 3986] Length = 304 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TS+ P T++ V D + +D Sbjct: 11 VALIGRPNVGKSTLMNTLIGQK-IAITSSKPQTTRNRIQTVFTD------ERGQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A+ ++ + V L++ + + D+ +F L V Sbjct: 64 PGIHKAKN-----KLGEYMVKVSTRTLRDVDLVLWLVEPGTFIGEGDEHIFEILSDVEVP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D L + +I Y + +++P S++K + L K I + Sbjct: 119 VILAVNKVDSLKQK------DDILEVIAKYSSKMNFADIVPVSALKGTNTDELLKVIFKY 172 Query: 210 I 210 + Sbjct: 173 L 173 >gi|313886089|ref|ZP_07819824.1| ribosome biogenesis GTPase Der [Porphyromonas asaccharolytica PR426713P-I] gi|312924435|gb|EFR35209.1| ribosome biogenesis GTPase Der [Porphyromonas asaccharolytica PR426713P-I] Length = 436 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 12/177 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P A GR N GKSSL+N L+ + ++ G T+ F F+ Sbjct: 171 PLLELPRFAIVGRPNAGKSSLLNALIGEERN-IVTDRSGTTRDSIFAEYDKFNQH----- 224 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + +LID G++ D ++F Sbjct: 225 -FYLVDTAGIRKKGKVNEDLEYYS--VIRAIRAIENADVCIMLIDATRGIEAQDANIFRV 281 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + + + K D + Q T+E+ R P +I S++ ++ I Sbjct: 282 IQRNNKGLVVCVNKWDLVEDKSMPVQRTMEEAIRA-RFAPFTDFPIIFISALNKQRI 337 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L R A + G T+ + ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-RSRQAIVTEEAGTTRDRQYGHVTWCE------RTFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ + + + ++D +GV +D ++ L + Sbjct: 58 GGWVLRSDDVFEEEINKQVR----IAVEEADLILFVVDILNGVTDLDDEIALMLRQTNKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D + Y + P S++ L ILE + Sbjct: 114 VILVANKAD---------NFTQHNDAAEFYSLGIGDPYPISAINGSSTGDLLDHILELL 163 >gi|307564580|ref|ZP_07627120.1| ribosome-associated GTPase EngA [Prevotella amnii CRIS 21A-A] gi|307346738|gb|EFN92035.1| ribosome-associated GTPase EngA [Prevotella amnii CRIS 21A-A] Length = 437 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 67/176 (38%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P A GR N GKSSLIN + + + G T+ + F Sbjct: 172 DDDIPRFAVVGRPNAGKSSLINSFIGEERN-IVTEIAGTTRDSIYTRYNKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L+ID G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVSEDLEFYSVM--RSIRSIENSDVCILMIDATRGIESQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 + S +V+ K D + Q+ ++ IR P +I S++ ++ I Sbjct: 283 QRNNKSLVVVVNKWDLV-QDKNQKVIDTFVNAIRCRMAPFVDFPIIFASALTKQRI 337 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 63/179 (35%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-KTRHAIVSDVAGTTRDRQY------GKCLWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V L+D G+ D+DV L + + Sbjct: 58 GG----WVVKSDDIFEDAIRQQVLVATEEADIVLFLVDTETGITDWDEDVALILRRTNLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + + Y + I S+ G L +LE + Sbjct: 114 VLLVANKVD---------NMGEYYTSAEFYKLGLGDPICISAQTGSGTGDLLDILLEKM 163 >gi|260173329|ref|ZP_05759741.1| putative GTP-binding protein, putative GTPase [Bacteroides sp. D2] gi|299149447|ref|ZP_07042504.1| GTP-binding protein [Bacteroides sp. 3_1_23] gi|315921602|ref|ZP_07917842.1| conserved hypothetical protein [Bacteroides sp. D2] gi|298512634|gb|EFI36526.1| GTP-binding protein [Bacteroides sp. 3_1_23] gi|313695477|gb|EFS32312.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 396 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 76/193 (39%), Gaps = 26/193 (13%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P A IA GR N GKSSLIN L + + A S+ PG T L + Sbjct: 2 SLTDTPNANRLHIALFGRRNSGKSSLINALTGQ-DTALVSDTPGTTTDL----VSKAMEI 56 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI-- 137 + P + +D PG+ + I R L LL G Sbjct: 57 QGIGPCL-FIDTPGFDDEGELGELR------ISRTLKAIEKTDIALLLC----GDTTFSH 105 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 ++++ + L +K + VL KID +E + I P + S+ ++ Sbjct: 106 EKEMLALLKEKNIPVIPVLNKID------IRENSDSLATYIEEECKIRP--LLISAKEKT 157 Query: 198 GIEVLRKAILETI 210 GIE +R+AILE + Sbjct: 158 GIEQIRQAILEKL 170 >gi|325915367|ref|ZP_08177684.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Xanthomonas vesicatoria ATCC 35937] gi|325538414|gb|EGD10093.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Xanthomonas vesicatoria ATCC 35937] Length = 465 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR-----LDEQQPFIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ + R + + L V ++D R G +D ++ ++L K Sbjct: 56 VDTGGI---AGDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +V+ KID T + + +V+ S+ R+GI+ L + + Sbjct: 111 ARPTVLVINKIDGTDEETVRSEFARY---------GFSDVVALSAAHRQGIDELLEEV 159 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ +L+ + Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDLERDNRQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 228 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIEQCQVAVLMLDATEGVTDQDATILGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + + E + S++ G+ L +A Sbjct: 286 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVSWAEAVRISALHGSGMRELFQA 343 Query: 206 I 206 I Sbjct: 344 I 344 >gi|297584643|ref|YP_003700423.1| GTP-binding protein Era [Bacillus selenitireducens MLS10] gi|297143100|gb|ADH99857.1| GTP-binding protein Era [Bacillus selenitireducens MLS10] Length = 302 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 17/178 (9%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKS+L+N ++ +K +A S+ P T++ V D + +D P Sbjct: 12 ALVGRPNVGKSTLLNQVLGQK-IAIMSDKPQTTRNRIQGVLTD------ERGQIVFIDTP 64 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G + + D L + L E + V L+D + G D+ + L+ Sbjct: 65 GIHKPK--HRLGDFMTKLAQQALRE---VDVVLFLVDAKEGKGAGDEYIIRKLENLETPV 119 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID++ P + K L YP EVIP S++ +E L + + + + Sbjct: 120 FLVINKIDEVHPEELLSIIAGYKDL---YP--FAEVIPVSALNGNNVETLLEQVFKYL 172 >gi|227878694|ref|ZP_03996608.1| GTP-binding protein [Lactobacillus crispatus JV-V01] gi|256843288|ref|ZP_05548776.1| GTP-binding protein Era [Lactobacillus crispatus 125-2-CHN] gi|256850355|ref|ZP_05555783.1| GTP-binding protein Era [Lactobacillus crispatus MV-1A-US] gi|262046497|ref|ZP_06019459.1| GTP-binding protein Era [Lactobacillus crispatus MV-3A-US] gi|293380657|ref|ZP_06626708.1| GTP-binding protein Era [Lactobacillus crispatus 214-1] gi|312978179|ref|ZP_07789923.1| GTP-binding protein Era [Lactobacillus crispatus CTV-05] gi|227861709|gb|EEJ69314.1| GTP-binding protein [Lactobacillus crispatus JV-V01] gi|256614708|gb|EEU19909.1| GTP-binding protein Era [Lactobacillus crispatus 125-2-CHN] gi|256712752|gb|EEU27745.1| GTP-binding protein Era [Lactobacillus crispatus MV-1A-US] gi|260573368|gb|EEX29926.1| GTP-binding protein Era [Lactobacillus crispatus MV-3A-US] gi|290922785|gb|EFD99736.1| GTP-binding protein Era [Lactobacillus crispatus 214-1] gi|310894897|gb|EFQ43967.1| GTP-binding protein Era [Lactobacillus crispatus CTV-05] Length = 300 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SDEMQVVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + +S + + V +++ + + DQ + + L + V Sbjct: 64 PGI---FKPHSKLDDYMD--KASVSSLNDVDLVLFMVEP-EEMGKGDQYIANLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ P ++ L E++P S+ + GIE L K I E + Sbjct: 118 VLLVINKVDEIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDLLKTIKEYL 171 >gi|168181631|ref|ZP_02616295.1| GTP-binding protein Era [Clostridium botulinum Bf] gi|237796398|ref|YP_002863950.1| GTP-binding protein Era [Clostridium botulinum Ba4 str. 657] gi|259645941|sp|C3L3F3|ERA_CLOB6 RecName: Full=GTPase Era gi|182675144|gb|EDT87105.1| GTP-binding protein Era [Clostridium botulinum Bf] gi|229262668|gb|ACQ53701.1| GTP-binding protein Era [Clostridium botulinum Ba4 str. 657] Length = 296 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ K L+ S P T++ + + + + VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTE------DNYQLVFVDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ + V LI+ + D + L + V Sbjct: 60 PGIHKPK-----HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVKVP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + I Sbjct: 115 VFLVLNKIDENPQEKVAETLKTYSELME-----FEEIIPISALKGKNIDLLKELMFKYI 168 >gi|289670462|ref|ZP_06491537.1| GTP-binding protein EngA [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 465 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR-----LDEQQPFIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ + R + + L V ++D R G +D ++ ++L K Sbjct: 56 VDTGGI---AGDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +V+ KID T + + +V+ S+ R+GI+ L + + Sbjct: 111 ARPTVLVINKIDGTDEETVRSEFARY---------GFSDVVALSAAHRQGIDELLEEV 159 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ +L+ + Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDLERDGRQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 228 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIEQCQVAVLMLDATEGVTDQDATILGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + + E + S++ G+ L +A Sbjct: 286 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVSWAEAVRISALHGSGMRELFQA 343 Query: 206 I 206 I Sbjct: 344 I 344 >gi|134300318|ref|YP_001113814.1| GTP-binding protein Era [Desulfotomaculum reducens MI-1] gi|134053018|gb|ABO50989.1| GTP-binding protein Era [Desulfotomaculum reducens MI-1] Length = 302 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A S+ P T+H K S L N M +D Sbjct: 13 VALVGRPNVGKSTLLNKLVGQK-VAIMSDKPQTTRH------KIHSVLTRNDAQMVFLDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG R ++ L + L++ DQ + L Sbjct: 66 PGIHKPR-----HKLGEYMVDVALGALKEVDVALFLVEASEAPGPGDQYIAEQLKGIKTP 120 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++L K+D + E + + K L+ EVIP S++ + +E L I++ + Sbjct: 121 VFLMLNKVDLIQREAVLERILQYKDLL-----PFAEVIPVSALAGENVERLIDTIIKYL 174 >gi|187935025|ref|YP_001885401.1| GTP-binding protein EngA [Clostridium botulinum B str. Eklund 17B] gi|238691598|sp|B2THQ9|DER_CLOBB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|187723178|gb|ACD24399.1| ribosome-associated GTPase EngA [Clostridium botulinum B str. Eklund 17B] Length = 438 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 13/181 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + IA G+ NVGKSSLIN L+ + L S+ G T+ S L+ Sbjct: 173 EDEYIRIAMIGKPNVGKSSLINKLLGEERL-IVSDVAGTTRDAI------DSYLETEQGK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+ ++ + +I Y + L+ID + GV + D+ + + Sbjct: 226 FILIDTAGLRRKSKVKEEIERY-SVIRTY-ASIEKADVCILMIDAQDGVTEQDEKIIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 + + +++ K D + +T+EK K ++ P E + S++ + + Sbjct: 284 HELNKAIIVLVNKWDLVEKDD--KTMEKFKKDLQGSLKFMPYAEYLFISALTGQRTHKIL 341 Query: 204 K 204 + Sbjct: 342 E 342 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 20/184 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K ++ + PG T+ + + + Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRISIVQDTPGVTRDRVY------AEAEWLNYNFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P + + + T + ++D + G+ DQ+V + L K Sbjct: 55 MIDTGGI----EPTNDDIIMKQMRRQANIAIETADVIVFIVDGKEGLTAADQEVANMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID L Y + I S+ + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDSLKYEE---------NSWEFYNLGIGDPITISASQALGLGDMLDRVV 161 Query: 208 ETIN 211 E + Sbjct: 162 EHFD 165 >gi|312143158|ref|YP_003994604.1| small GTP-binding protein [Halanaerobium sp. 'sapolanicus'] gi|311903809|gb|ADQ14250.1| small GTP-binding protein [Halanaerobium sp. 'sapolanicus'] Length = 409 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 74/190 (38%), Gaps = 20/190 (10%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + PK P IA GR N GKSSLIN L N+K LA S PG T + + Sbjct: 1 MQSTPKGNRPHIAVFGRRNAGKSSLINSLCNQK-LALVSEVPGTTTDPVY-----KAMEL 54 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 L + ++D G + + Y R T L+ID + + +Q Sbjct: 55 LPLGPVMMIDTAGIDDSGDLGEMRVK-----KSYEIIRKT-DLAVLVIDNQVEFGKYEQK 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +K V+ KID +KT+ + + + I S+ +GIE Sbjct: 109 LLDNFNKTNTPVVAVINKIDL--------AFDKTEVVDKLQREYDLKPILLSAESGQGIE 160 Query: 201 VLRKAILETI 210 LR I E + Sbjct: 161 ELRDKIAEKM 170 >gi|73669412|ref|YP_305427.1| GTP-binding protein [Methanosarcina barkeri str. Fusaro] gi|119369213|sp|Q46B95|ENGB_METBF RecName: Full=Probable GTP-binding protein EngB gi|72396574|gb|AAZ70847.1| GTP-binding protein [Methanosarcina barkeri str. Fusaro] Length = 209 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 27/196 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F GRSNVGKSSL+ L K R PG T + + + D Sbjct: 15 EIIFVGRSNVGKSSLLRELFGAK--VRVGKRPGVT----------LRPAHVQVSDLLITD 62 Query: 91 MPGYGYARAPKKNV-DSWGGLIVRYLSER-STLRCVYLLIDCRHGVK-----------QI 137 MPG+G+ K D V Y+ E ++ L+ID + I Sbjct: 63 MPGFGFMSGVKDRKQDIVKDKTVHYIEENAERIKLGVLVIDSPAFPQIVDRWDSKDQIPI 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTAHPEVIPTSSVK 195 D ++F FL + + I K+DK+ + L+ + + + +I S K Sbjct: 123 DVEMFDFLREVGIDTIIAANKMDKVKESEYGSLLDEIAIRLGLESPWQNWKHIIAPISAK 182 Query: 196 RKGIEVLRKAILETIN 211 + I+ L+ + + ++ Sbjct: 183 KGDIKALKGLLRDRLH 198 >gi|166712110|ref|ZP_02243317.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzicola BLS256] Length = 465 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ +L+ + Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDLERDGRQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 228 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIEQCQVAVLMLDATEGVTDQDATILGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + + E + S++ G+ L +A Sbjct: 286 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVSWAEAVRISALHGSGMRELFQA 343 Query: 206 I 206 I Sbjct: 344 I 344 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ ++ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRHYGVCR-----LDEQQPFIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + R + + L V ++D R G +D ++ ++L K Sbjct: 56 VDTGGI---AGDEDGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +V+ KID T + + V+ S+ R+GI+ L + + Sbjct: 111 ARQTVLVINKIDGTDEETVRSEFARY---------GFCNVVALSAAHRQGIDELLEEV 159 >gi|153941135|ref|YP_001392222.1| GTP-binding protein Era [Clostridium botulinum F str. Langeland] gi|189037261|sp|A7GHG2|ERA_CLOBL RecName: Full=GTPase Era gi|152937031|gb|ABS42529.1| GTP-binding protein Era [Clostridium botulinum F str. Langeland] gi|295320220|gb|ADG00598.1| GTP-binding protein Era [Clostridium botulinum F str. 230613] Length = 296 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ K L+ S P T++ + + + + VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTE------DNYQLVFVDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ + V LI+ + D + L + V Sbjct: 60 PGIHKPK-----HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVKVP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + I Sbjct: 115 VFLVLNKIDENPQEKVAETLKIYSELME-----FEEIIPISALKGKNIDLLKELMFKYI 168 >gi|120601244|ref|YP_965644.1| GTP-binding protein EngA [Desulfovibrio vulgaris DP4] gi|166198712|sp|A1V9V1|DER_DESVV RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120561473|gb|ABM27217.1| small GTP-binding protein [Desulfovibrio vulgaris DP4] Length = 495 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 11/181 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N L+ R N A T + PG T+ + + + + + Sbjct: 4 KIALVGRPNVGKSTLFNRLI-RSNRAITHDMPGVTRDRMEGIVRGRNKRPFGIIDTGGIT 62 Query: 91 MPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 + G+ A P ++ + + V L++D R G+ D+ + S+L + Sbjct: 63 LDGHAAVAEGPAGIRGFEAEILRQAEEAIAECVAVCLVVDGREGLLPFDEHLASYLRRTG 122 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + L + V+ S+ + L + + Sbjct: 123 KPVLVVVNKVDGIEKEDV---------LTAEFHILGFPVLAVSAEHGHNLRWLESEMRDL 173 Query: 210 I 210 + Sbjct: 174 L 174 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 14/181 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P + GR N GKSSL+N L + S+ G T+ + + + Sbjct: 227 PEAPLRLCMLGRPNAGKSSLVNALTGTNRM-IVSDVAGTTRDSV------DVAFEKDGLS 279 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G V+ + + L + L++D G+ D+ + L Sbjct: 280 YTFVDTAGVRRRSRITDTVERYS--VNSSLKSTTKAHVTLLVLDAVEGITSQDKRLIELL 337 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 D++ + +++ K+D + ++ + L+ H ++ S+ LR Sbjct: 338 DERKTPFMVLVNKMDLVPAKAREDGKRNFRDLLN--FCQHVPLLFVSAKTGY---ELRSI 392 Query: 206 I 206 + Sbjct: 393 V 393 >gi|296106525|ref|YP_003618225.1| GTP-binding protein Era [Legionella pneumophila 2300/99 Alcoy] gi|295648426|gb|ADG24273.1| GTP-binding protein Era [Legionella pneumophila 2300/99 Alcoy] Length = 295 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 16/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K L+ TS P T+H + + + VD Sbjct: 8 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTE------DEFQFVYVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A + +S + + L+D H K D+ V + + V Sbjct: 61 PGIHQGNA----KAINRMMNKTAISVLRDVDVIAFLVDGTH-WKDEDEYVLNLIKHAKVP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+DK++ T + L + + + Y A +IP S+ ++ L + Sbjct: 116 CILVVNKVDKITDKT--QLLPWIEQISQRYQFAA--IIPLSAKTGLQVDELEGKL 166 >gi|94970562|ref|YP_592610.1| GTP-binding protein Era [Candidatus Koribacter versatilis Ellin345] gi|94552612|gb|ABF42536.1| GTP-binding protein Era [Candidatus Koribacter versatilis Ellin345] Length = 324 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR N GKS+L+N LV K +A ++ P T++ + + LVD Sbjct: 8 VSIIGRPNAGKSTLLNALVGEK-IAIVTHKPQTTRNRIQGIVT-----VPKKGQIVLVDT 61 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG ++ + + D H ++ D+ S + K Sbjct: 62 PGVHKPDKTLNKR-----MMQEVYDALEGCDLLLYIHDVTHKFEKEDEYTLSLVKKTGQP 116 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++L KID ++ E + + L E+IP S+ K G+++LRK +L+++ Sbjct: 117 VMLLLNKIDLIAKPKLLEIITQFSTL-----HDFKEIIPISAAKGSGLDILRKKVLQSL 170 >gi|309388705|gb|ADO76585.1| iron-only hydrogenase maturation protein HydF [Halanaerobium praevalens DSM 2228] Length = 415 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K P IA GR NVGKSSLIN L N+ +LA S+ PG T + + + Sbjct: 6 KGDRPHIAVFGRRNVGKSSLINRLTNQ-DLALVSSQPGTTTDPVYKAMELLPIGPVMIID 64 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 A +D G A KK + L+I G ++ + Sbjct: 65 TAGIDDQGELGAMRIKKTKEIMRKT-----------DLALLVISAAQGAGDFERKLIKDF 113 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K + + +L KID L + E +E L + + EVI SS K I+++R+ Sbjct: 114 KEKNIPFLTILNKIDILKDLNS-EQVELKSELKDFFLKNNLEVIKVSSKKEINIDLIREK 172 Query: 206 ILETI 210 I + + Sbjct: 173 IAQKM 177 >gi|297538116|ref|YP_003673885.1| ribosome-associated GTPase EngA [Methylotenera sp. 301] gi|297257463|gb|ADI29308.1| ribosome-associated GTPase EngA [Methylotenera sp. 301] Length = 484 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 11/176 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P++A GR NVGKS+L+N L+ + + + PG T+ +L+ N Sbjct: 177 DRIPKVAIVGRPNVGKSTLVNALLGEERV-IAFDEPGTTRDSISI------DLEKNGKHY 229 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ + +++ + V L++D + G+ + D V +++ Sbjct: 230 TLIDTAGVRKRGRVLEAIEKFS--VIKTIQSIEEANVVILVVDAQEGITEQDAHVAAYIL 287 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + K D L + + A E S++++KG+ L Sbjct: 288 DAGRALVVAINKWDGLKEEERDWVKREIDRKLMFLDFA--EFHYISALRKKGLPEL 341 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 66/183 (36%), Gaps = 20/183 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + GR NVGKS+L N L + A ++ PG T+ + + + Sbjct: 2 LPTVVLVGRPNVGKSTLFNRLT-KSRDALVADLPGLTRD------RHYGRGIGASQPYLV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G+ P + + V+ L + L+D R G D ++ + L + Sbjct: 55 VDTGGF----EPNTDSGILKAMAVQTLLAIDEADVIIFLVDGRQGATPQDMEIANRLRRS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K E + K + + + SS +G++ + LE Sbjct: 111 KCPVLLAVNKT---------EGMNKAVVSAEFHELGLGDPLSISSAHGEGVKDIIDLALE 161 Query: 209 TIN 211 + + Sbjct: 162 SFH 164 >gi|54293917|ref|YP_126332.1| GTP-binding protein Era [Legionella pneumophila str. Lens] gi|53753749|emb|CAH15207.1| hypothetical protein lpl0973 [Legionella pneumophila str. Lens] Length = 311 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 16/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K L+ TS P T+H + + + VD Sbjct: 24 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTE------DEFQFVYVDT 76 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A + +S + + L+D H K D+ V + + + V Sbjct: 77 PGIHQGNA----KAINRMMNKTAISVLRDVDVIAFLVDGTH-WKDEDEYVLNLIKQAKVP 131 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+DK++ T + L + + + Y A +IP S+ ++ L + Sbjct: 132 CILVVNKVDKITDKT--QLLPWIEQISQRYQFAA--IIPLSAKTGLQVDELEGKL 182 >gi|120610115|ref|YP_969793.1| GTP-binding protein EngA [Acidovorax citrulli AAC00-1] gi|166224298|sp|A1TM31|DER_ACIAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120588579|gb|ABM32019.1| small GTP-binding protein [Acidovorax citrulli AAC00-1] Length = 447 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 26/184 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ G T+ + + N K ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGNGKLGKHEYIVI 55 Query: 90 DMPGYGY---ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + ++ + + V ++D R G+ D D+ ++L Sbjct: 56 DTGGFEPDASSGIYREMAKQTQQAV-------AEADVVIFVVDARAGLSAQDHDIANYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V K E + + L Y EV+P S+ +G+ + ++ Sbjct: 109 RLGKPCLLVGNKA---------EGMREGVQLAEFYELGLGEVLPVSAAHGQGVRSMLESA 159 Query: 207 LETI 210 L+T+ Sbjct: 160 LDTL 163 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 71/181 (39%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A +GR NVGKS+LIN + + L + PG T+ + N L Sbjct: 179 PIRLAVAGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDAI------SVPFERNGQQFEL 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L + V LL+D GV D + ++ + Sbjct: 232 IDTAGLRRKGKVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILES 289 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D + Q + + + S+ KR+G+ L +I + Sbjct: 290 GRAVVLAVNKWDAVDDYGRQMLERSIETRLS--FLKFASLHFISAKKRQGLGPLWTSIAQ 347 Query: 209 T 209 Sbjct: 348 A 348 >gi|118580147|ref|YP_901397.1| GTP-binding protein EngA [Pelobacter propionicus DSM 2379] gi|171704446|sp|A1APR9|DER_PELPD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|118502857|gb|ABK99339.1| small GTP-binding protein [Pelobacter propionicus DSM 2379] Length = 448 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 24/172 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L+ + A + PG T+ N+ + F L+ Sbjct: 3 PLVALVGRPNVGKSTLFNRLLGHRR-AIVDDTPGVTRDRNYALINRFEK------PFILI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + ++D R G+ D +V + L + Sbjct: 56 DTGGF----EPVTEDRLLQQMREQSSLAMEEADVIIFMMDARSGLTPADVEVANMLRRVK 111 Query: 150 VSYQIVLTKID--KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 V+ K+D KL +A+ Y + S+ +G+ Sbjct: 112 KPVMYVVNKVDGEKLENDSAE-----------FYSLGVENLYTISAEHNRGV 152 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 9/179 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N L+ + + + G T+ + N L+D Sbjct: 178 IAVVGRPNVGKSSLVNRLLGFERVV-ANPTAGTTRDSV------DTLFMCNKKPYLLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V L V +++D GV + D+ + ++ + + Sbjct: 231 AGIRRKGKTTEKLEKYS--VVDALRSIERADVVLVVLDATQGVTEQDERIAGYVHEAGRA 288 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 VL K D + + L K A+ ++ S++ + + +++ E + Sbjct: 289 CVFVLNKWDAIEKDNSTFGLYVDKVRTGFKYLAYAPIVFVSAMTGQRTAKVMESVDEVM 347 >gi|258511948|ref|YP_003185382.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478674|gb|ACV58993.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 298 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A SN P T++ V M +D Sbjct: 8 VALIGRPNVGKSTLLNALVGQK-VAIMSNRPQTTRNRIRGVRT------TETSQMIFIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ L + + + L++D V +Q++ L++ Sbjct: 61 PGIHKPK-----HRLGEYMVDAALKTLNEVDVIVLVVDASSPVHPTEQEIAKQLERVRTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + L K+D L L++ + P E +P S+++ + +++L + I + + Sbjct: 116 VILALNKVDALEDRAL--VLKRIEEYQALRP--FEEYVPISALRGEQVDLLAEIIEKRL 170 >gi|220935213|ref|YP_002514112.1| GTP-binding protein EngA [Thioalkalivibrio sp. HL-EbGR7] gi|254783176|sp|B8GTN1|DER_THISH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219996523|gb|ACL73125.1| GTP-binding protein EngA [Thioalkalivibrio sp. HL-EbGR7] Length = 464 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 11/175 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IAF GR N GKS+LIN ++ + + T PG T+ F + + L+D Sbjct: 180 IAFVGRPNAGKSTLINRILGEERVVAT-EIPGTTRDSIFI------PFERDGQQYTLIDT 232 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L V +++D R G+ + D + + + Sbjct: 233 AGVRRRSRVHEAIEKFS--VVKTLQAIDAAHVVVMVLDAREGISEQDAHLLGVVLDAGRA 290 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K D L P + + A I S++ G+ L + Sbjct: 291 LVVAINKWDGLDPDQRDRIRHELDLKLPFLDFAEKRFI--SALHGTGVGDLFAHV 343 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 58/173 (33%), Gaps = 25/173 (14%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 LPVIALVGRPNVGKSTLFNQLTRSRD-ALVADFPGLTRDRQY------GPGRVGGFPYMV 54 Query: 89 VDMPGYGYARAPKK--NVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G I V L+D R G+ DQ + L Sbjct: 55 VDTGGLSGEAETLDNLMARQTQQAIDES-------DVVLFLVDGREGLTAADQAIARSLR 107 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + +V+ K D + A + + IP ++ +G+ Sbjct: 108 TQGKKVLLVVNKTDGVDADQA---------MAEFHALGFGAPIPIAATHGRGV 151 >gi|295696375|ref|YP_003589613.1| ribosome-associated GTPase EngA [Bacillus tusciae DSM 2912] gi|295411977|gb|ADG06469.1| ribosome-associated GTPase EngA [Bacillus tusciae DSM 2912] Length = 451 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 69/190 (36%), Gaps = 9/190 (4%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 PE P +A GR NVGKSSL+N L+ + + S PG T+ + Sbjct: 173 PEDTGEPDHDAIRVAVIGRPNVGKSSLVNRLLGEERV-LVSEIPGTTRDAV------DTL 225 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + + L+D G ++ + + L R L L+ID + G+ + D Sbjct: 226 FEREGHSFILIDTAGLRKRGRVWEDTEKYSVL--RALRAIDRSDVCLLVIDGKQGIAEQD 283 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + V + + +V+ K D + + V+ S+ + Sbjct: 284 KRVAGYAVDAGRAVAVVVNKWDLVEKDDKTAVRMTEEIRQEFAFMTWAPVVFVSAKTGQR 343 Query: 199 IEVLRKAILE 208 + + +++ Sbjct: 344 VGRILDLVVQ 353 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N +V + +A + PG T+ + + N ++D Sbjct: 13 VAIVGRPNVGKSTLFNRIVGGR-IAIVEDKPGVTRDRLYALAS------WNGRGFRIIDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V S + L E V L+D G+ D+++ L + Sbjct: 66 GGLDFGG-SDAIVKSIRAQVELALEE---ADAVIFLVDGISGITPADEEIAGRLRRAGKP 121 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + AQ + + P S+ GI L A++ + Sbjct: 122 VVLAVNKLDNPNRMIAQ---------YEFFRLGLGDPFPISAEHGLGIGDLLDAVVRRL 171 >gi|119494580|ref|ZP_01624713.1| GTP-binding protein EngA [Lyngbya sp. PCC 8106] gi|119452086|gb|EAW33297.1| GTP-binding protein EngA [Lyngbya sp. PCC 8106] Length = 453 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 9/196 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ +P+ L ++ +A GR NVGKSSL+N + A S G T+ Sbjct: 162 IKYIPKADELEESEEIRVAIVGRPNVGKSSLLNAFLGENR-AIVSPISGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ N LVD G + + + +G I R V L+ID V Sbjct: 216 -DTVVERNGKTYRLVDTAGIRRKKNVEYGAEFFG--INRAFKAIRRSNIVLLIIDAIDRV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + + + ++ + IV+ K D + T + + R Y + I S++ Sbjct: 273 TEQDLKLANRVSEEGRACVIVVNKWDIIEKDTYTILEYEREVKARLYFMDWAKTIFVSAM 332 Query: 195 KRKGIEVLRKAILETI 210 + +E + + + + Sbjct: 333 TGQRVEKIIDLVDQAV 348 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 70/182 (38%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L ++ + + PG T+ + + ++ Sbjct: 3 LPIVAIVGRPNVGKSTLVNRLSETQD-SIVHDQPGITRD------RTYRYAYWQDREFSV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + ++V + ++D + G+ D+ + S+L + Sbjct: 56 VDTGGLIFDDDTEFLPLIREQVMV----ALAEATVAIFVVDGQTGLTGGDEAIASWLREH 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V + + K + ++ ++ + P SS+ G L +++ Sbjct: 112 SVPVLLAVNKC----ESPTTGLIQSMQF----WELGLGNPFPLSSIHGSGTGELLDELIK 163 Query: 209 TI 210 I Sbjct: 164 YI 165 >gi|46581596|ref|YP_012404.1| GTP-binding protein EngA [Desulfovibrio vulgaris str. Hildenborough] gi|81698970|sp|Q725L9|DER_DESVH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|46451019|gb|AAS97664.1| GTP-binding protein EngA [Desulfovibrio vulgaris str. Hildenborough] gi|311235239|gb|ADP88093.1| ribosome-associated GTPase EngA [Desulfovibrio vulgaris RCH1] Length = 491 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 11/181 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L N L+ R N A T + PG T+ + + + + + Sbjct: 4 KIALVGRPNVGKSTLFNRLI-RSNRAITHDMPGVTRDRMEGIVRGRNKRPFGIIDTGGIT 62 Query: 91 MPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 + G+ A P ++ + + V L++D R G+ D+ + S+L + Sbjct: 63 LDGHAAVAEGPAGIRGFEAEILRQAEEAIAECVAVCLVVDGREGLLPFDEHLASYLRRTG 122 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + L + V+ S+ + L + + Sbjct: 123 KPVLVVVNKVDGIEKEDV---------LTAEFHILGFPVLAVSAEHGHNLRWLESEMRDL 173 Query: 210 I 210 + Sbjct: 174 L 174 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 14/181 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P + GR N GKSSL+N L + S+ G T+ + + + Sbjct: 223 PEAPLRLCMLGRPNAGKSSLVNALTGTNRM-IVSDVAGTTRDSV------DVAFEKDGLS 275 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G V+ + + L + L++D G+ D+ + L Sbjct: 276 YTFVDTAGVRRRSRITDTVERYS--VNSSLKSTTKAHVTLLVLDAVEGITSQDKRLIELL 333 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 D++ + +++ K+D + ++ + L+ H ++ S+ LR Sbjct: 334 DERKTPFMVLVNKMDLVPAKAREDGKRNFRDLLN--FCQHVPLLFVSAKTGY---ELRSI 388 Query: 206 I 206 + Sbjct: 389 V 389 >gi|256425494|ref|YP_003126147.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588] gi|256040402|gb|ACU63946.1| small GTP-binding protein [Chitinophaga pinensis DSM 2588] Length = 441 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 13/185 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P+IA G+ NVGKSSL+N L+ + S+ PG T+ K F Sbjct: 178 EALPKIAIIGQPNVGKSSLLNALIGEERN-IVSDIPGTTRDTIHTHYKMFQK------DF 230 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G +++++ + ++R + LL+D GV D +FS Sbjct: 231 VLIDTAGLRRKNKVQEDLEFYS--VIRAIKAMDEADVCLLLLDATKGVTAQDLSIFSLAG 288 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K +++ K D + + + K L R P + VI TS V+++ I KA Sbjct: 289 RKGKGLVVLVNKWDLIEDKSTNSARDYEKDLKGRLAPFSDVPVIFTSVVEKQRI---FKA 345 Query: 206 ILETI 210 I E + Sbjct: 346 IEEAL 350 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 20/159 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L+ ++ A + G T+ + V N + V Sbjct: 6 VAIVGRPNVGKSTLFNRLLEQRK-AIVDDVSGVTRDRQYGVADWNGKSFNVIDTGGFVSR 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 + R +K V + + D G+ +D ++ L + + Sbjct: 65 SEDVFEREIRKQVKI----------AMEEANLLLFMCDVATGITDLDAEMADILRRSSKP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 +V+ K+D A LE T++ Y +V Sbjct: 115 VILVVNKVD-----NATRQLEATEF----YSLGFEKVFF 144 >gi|302345898|ref|YP_003814251.1| ribosome-associated GTPase EngA [Prevotella melaninogenica ATCC 25845] gi|302149910|gb|ADK96172.1| ribosome-associated GTPase EngA [Prevotella melaninogenica ATCC 25845] Length = 437 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 16/186 (8%) Query: 20 EIGLLPKA----GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + +P+ P A GR N GKSS+IN + + G T+ + Sbjct: 162 NLKDVPEEAVDQDIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRYTK 220 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 F LVD G ++++ + + R + L++D G++ Sbjct: 221 FG------FDFYLVDTAGIRRKNKVSEDLEFYSVM--RSIRSIENSDVCILMLDATRGIE 272 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSS 193 D ++F + + S +V+ K D + Q+ ++ + IR P +I S+ Sbjct: 273 AQDMNIFQLIQRNNKSLVVVVNKWDLVEDKN-QKVIDTFENAIRKRMAPFVDFPIIFASA 331 Query: 194 VKRKGI 199 + ++ I Sbjct: 332 LTKQRI 337 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 63/179 (35%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QTRHAIVSDTAGTTRDRQY------GKCQWNGREFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V ++D G+ D+DV L + + Sbjct: 58 GG----WVVKSDDIFEDAIRKQVLVATEEADLVLFVVDTETGITDWDEDVALILRRTKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y E I S+ G L +LE + Sbjct: 114 VLLVANKVD---------NSGEYYQAAEFYKLGLGEPICISAATGGGTGDLLDILLENL 163 >gi|157364503|ref|YP_001471270.1| small GTP-binding protein [Thermotoga lettingae TMO] gi|166920104|sp|A8F7S2|DER_THELT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157315107|gb|ABV34206.1| small GTP-binding protein [Thermotoga lettingae TMO] Length = 435 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 84/196 (42%), Gaps = 13/196 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 LR E +L K P+IA G+ NVGKSSL N L+N A + PG T+ Sbjct: 163 LRESGEKSMLFKESSPKIAIVGKPNVGKSSLFNALLNMDR-ATVTPVPGTTRDPV----- 216 Query: 75 DFSNLKNNLPAMALVDMPGY-GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ N LVD G +R +K ++ + I R + + V L+ID G Sbjct: 217 -DEMIEINGKKYILVDTAGMRRKSRIERKTIEQFS--ISRTIDTIQSADVVLLVIDATEG 273 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + D+ + + + V+ K D ++ ++ + ++ TS+ Sbjct: 274 VTRQDKRIADLILSSGRAMVCVINKFDLVN---VRKKDYEAALFTEMPFINFCRIVFTSA 330 Query: 194 VKRKGIEVLRKAILET 209 VK+ G+E L AI E Sbjct: 331 VKKSGLEKLFNAIDEA 346 Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 67/180 (37%), Gaps = 21/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + +GR+NVGKS+L N L+ R+ A T G T+ + + N + L D Sbjct: 4 VVIAGRANVGKSTLFNRLIGRRK-AITEKIEGVTRDIIKGLV------VYNETSFLLYDT 56 Query: 92 PGYGYARAPKKNVD-SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + D + + + ++D R G+ D+ V L K A Sbjct: 57 CG-----VFESTRDPVLLAMRDKAFEAFRKADLILFVVDGRSGITSEDEYVAQQLRKIAK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K + + + ++ L L E IP S+ I+ L I + Sbjct: 112 KVLMVINKSE--NMSVVEKNLPDIMKL------GFAEYIPVSAQHGNNIDELLDKITNLL 163 >gi|284050435|ref|ZP_06380645.1| GTP-binding protein EngA [Arthrospira platensis str. Paraca] gi|291569696|dbj|BAI91968.1| GTP-binding protein [Arthrospira platensis NIES-39] Length = 453 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 19/197 (9%) Query: 21 IGLLP------KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 I LP +A GR NVGKSSL+N + ++ A S G T+ Sbjct: 162 IEHLPSSTEDDDNEELRVAIVGRPNVGKSSLLNTFLGQER-AIVSPISGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + +++N LVD G + + + +G I R V +ID GV Sbjct: 216 -DTIVEHNGNTYRLVDTAGIRRKKHVEYGAEFFG--INRAFKAIRRADVVLFVIDAVEGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTS 192 DQ + + + IV+ K D + + T+ + + ++R+ Y ++I S Sbjct: 273 TDQDQKLAGRIADDGRACVIVVNKWDAVEKDSY--TILEYEKVMRSRLYFLDWADMIFVS 330 Query: 193 SVKRKGIEVLRKAILET 209 ++ + +E + K + + Sbjct: 331 AMTGQRVEKIFKLVDKA 347 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 19/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L+N L ++ A + PG T+ + + + Sbjct: 2 SRPIVAIIGRPNVGKSTLVNRLTQTQD-AIVHDQPGMTRD------RTYRSAYWQDREFI 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G + + + + + L + L++D + G D+ + S+L + Sbjct: 55 VVDTGGLVF----DDDTEFVPLIREQALMALAEATAAILVVDGQTGPTGGDEAIASWLRQ 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + V + + K + + + + P SS+ G L ++ Sbjct: 111 QKVPILLAVNKC--------ESPTQGLTQAAQFWELGLGTPFPISSIHGNGTGELLDTLI 162 Query: 208 ETI 210 E + Sbjct: 163 EHL 165 >gi|170754569|ref|YP_001782578.1| GTP-binding protein Era [Clostridium botulinum B1 str. Okra] gi|226741200|sp|B1ILK9|ERA_CLOBK RecName: Full=GTPase Era gi|169119781|gb|ACA43617.1| GTP-binding protein Era [Clostridium botulinum B1 str. Okra] gi|322807262|emb|CBZ04836.1| GTP-binding protein Era [Clostridium botulinum H04402 065] Length = 296 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ K L+ S P T++ + + + + VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTE------DNYQLVFVDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ + V LI+ + D + L + V Sbjct: 60 PGIHKPK-----HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVKVP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID+ ETL+ L+ E+IP S++K K I++L++ + + I Sbjct: 115 VFLVLNKIDENPQEKVAETLKTYSELME-----FEEIIPISALKGKNIDLLKELMFKYI 168 >gi|39974085|ref|XP_368433.1| hypothetical protein MGG_00811 [Magnaporthe oryzae 70-15] gi|145018253|gb|EDK02532.1| hypothetical protein MGG_00811 [Magnaporthe oryzae 70-15] Length = 562 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 54/215 (25%), Positives = 75/215 (34%), Gaps = 70/215 (32%) Query: 12 WIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRK----------------- 53 FL +P+ PEI GRSNVGKS++IN + Sbjct: 101 PKFLYSARRFQEIPRNTLVPEICLLGRSNVGKSTMINGIAGMHPSKTGNVDKTLAKKGSG 160 Query: 54 -----NLARTSNAPGRTQHLNFFVPKDF-------------------------------- 76 LA TS G TQ LN + Sbjct: 161 DWGIAGLAVTSRKAGCTQTLNCYGFGPAPSIQVRGCELLQPQETEGAEAARGAVGGRSRS 220 Query: 77 ----------SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYL 126 N + + ++ ++DMPGYG + D WG IV+Y+ +R L+ L Sbjct: 221 EVREDAKERAKNRERHNHSLYIMDMPGYG-----HNSRDEWGNEIVKYIQKRKMLKGAVL 275 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDK 161 LID G K+ D+ L V +VLTK +K Sbjct: 276 LIDAAAGFKEGDRVTLQLLRDAQVRTLVVLTKANK 310 >gi|315651881|ref|ZP_07904884.1| ribosome-associated GTPase EngA [Eubacterium saburreum DSM 3986] gi|315485883|gb|EFU76262.1| ribosome-associated GTPase EngA [Eubacterium saburreum DSM 3986] Length = 443 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA G+ NVGKSS+IN L + + S+ G T+ + + NN Sbjct: 175 DDDRPRIAIVGKPNVGKSSIINRLTGQNRV-IVSDIAGTTRDAI------DTVVVNNKQE 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K++++ + I+R ++ V L+ID GV + D + Sbjct: 228 YIFIDTAGLRRKSKVKEDIERYS--IIRTVTAVERADVVILVIDASEGVTEQDAKIAGIA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + + K D + E K ++ P A E I S++ + ++ L Sbjct: 286 HDRGKGIIVAVNKWDLIEKNNKTVYEYTNDIKRVLSFMPYA--EFIFISALSGQRLQKLF 343 Query: 204 KAI 206 + I Sbjct: 344 ELI 346 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 63/178 (35%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + ++ + PG T+ + ++ L+ Sbjct: 4 PVVAIIGRPNVGKSTLFNAIAGEP-ISIVKDTPGVTRDRIY------ADCTWLDMNFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ + + + T + + D R G+ D V L K Sbjct: 57 DTGGI----EPESSDVILSQMREQAEIAIETADVIVFITDVRQGLVDSDSKVCDMLRKSR 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D ++ + Y + + S+ R GI L A+ Sbjct: 113 KPVVLAVNKVDSIAK--------FGNDVYEFYNLGIGDPVAISAASRLGIGDLLDAVA 162 >gi|197334668|ref|YP_002156885.1| GTP-binding protein Era [Vibrio fischeri MJ11] gi|197316158|gb|ACH65605.1| GTP-binding protein Era [Vibrio fischeri MJ11] Length = 322 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D VD Sbjct: 31 IAIVGRPNVGKSTLLNQILGQK-ISITSRKPQTTRHRIMGVDTD------GDYQAIYVDT 83 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V L+D H D+ V + L K Sbjct: 84 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVLFLVDGTH-WTPDDEMVLNKLKKSEF 137 Query: 151 SYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +++ K+D + L++ + +V+P S+ ++V+ K + E Sbjct: 138 PTVLLVNKVDNVKDKKDVMTHLQEMTEKM-----DFVDVVPISAKTGSNVDVVHKLVREH 192 Query: 210 I 210 + Sbjct: 193 L 193 >gi|227892551|ref|ZP_04010356.1| GTP-binding protein Era [Lactobacillus ultunensis DSM 16047] gi|227865672|gb|EEJ73093.1| GTP-binding protein Era [Lactobacillus ultunensis DSM 16047] Length = 301 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + +N + VD Sbjct: 11 VALIGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SNKMQVVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + LS + + V +++ + + DQ + L + V Sbjct: 64 PGI---FKPHSKLDDYMD--KASLSSLNDVDLVLFMVEP-EEIGKGDQYIADLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ P ++ L E++P S+ + GIE L I + + Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDLLGTINKYL 171 >gi|212225100|ref|YP_002308336.1| GTP-binding protein [Thermococcus onnurineus NA1] gi|212010057|gb|ACJ17439.1| probable GTP-binding protein [Thermococcus onnurineus NA1] Length = 203 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 26/192 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L + R PG T+ ++ + +VDM Sbjct: 2 IIFVGRSNVGKSTLIFRLTGKW--VRRGKRPGVTRK----------PVEVSWRNRKVVDM 49 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-----------HGVKQID 138 PG+G+ PK+ + IV ++ + + L+ID + G ID Sbjct: 50 PGFGFMSGLPKEKQEKIKDEIVHFIENNADEIDLAILVIDGKSVLEIIERWEKRGEIPID 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F FL + + + + KIDK+ T K+ + Y + +P S+ K Sbjct: 110 VEFFQFLRELKIPTIVAVNKIDKVKNVQGTITRLAEKFGV-PYSEINEIFVPISAKFGKN 168 Query: 199 IEVLRKAILETI 210 ++ LR I + + Sbjct: 169 LDELRMLIEKKL 180 >gi|86605901|ref|YP_474664.1| GTP-binding protein EngA [Synechococcus sp. JA-3-3Ab] gi|123506716|sp|Q2JV46|DER_SYNJA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|86554443|gb|ABC99401.1| GTP-binding protein EngA [Synechococcus sp. JA-3-3Ab] Length = 459 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKSSL+N L ++ A + PG T+ + ++ N + + Sbjct: 3 LPLVAVVGRPNVGKSSLVNRLAGVRS-AIVHDEPGITRDRLY------QEVEWNGRRLRV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + V ++D R G+ D+++ +L ++ Sbjct: 56 VDTGGLVFGDDSEFLPHIRQQAMA----AMAEAHAVIFVVDGREGLTPADKELADWLRRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K + + E IP S+V G+ L +A+L Sbjct: 112 PLPVVVAVNKC--------ESGQLGLAQAAAFWELGLGEPIPCSAVHGNGVAELLEAVL 162 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 10/173 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKSSL+N LV + A S G T+ + ++ + Sbjct: 175 EPDPIAVAIVGRPNVGKSSLLNRLVGSER-AIVSPIAGTTRDAV------DTLVEWEGQS 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + I R V L+ID GV + DQ + + Sbjct: 228 YRLIDTAGIRRKSRVEYGVEFFS--INRAFKAIQRSDVVLLVIDALEGVTEQDQRLAGRI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI-RNYPTAHPEVIPTSSVKRK 197 +++ + IV+ K D + E T+ + R Y ++ S++ + Sbjct: 286 EEEGRACIIVVNKWDAVENKDTHTINEYTREIRERLYFIDWAPLLFVSALTGQ 338 >gi|158334891|ref|YP_001516063.1| tRNA modification GTPase TrmE [Acaryochloris marina MBIC11017] gi|205829048|sp|B0CBB0|MNME_ACAM1 RecName: Full=tRNA modification GTPase mnmE gi|158305132|gb|ABW26749.1| tRNA modification GTPase TrmE [Acaryochloris marina MBIC11017] Length = 455 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 26/179 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N R + A ++ PG T+ + S L + ++D Sbjct: 223 VAIIGRPNVGKSSLLNAWC-RCDRAIVTDLPGTTRDVV------ESQLVVGGIPIQVLDT 275 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + V+ G + V L ID G DQ ++ + Sbjct: 276 AGI---RETEDQVEQIGVTRSH--QAAQSADLVLLTIDASVGWTSDDQQLYQAFQD--LP 328 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ K+D + YP A +V+ T + + +GI L AILET+ Sbjct: 329 LILIVNKVDLVPQEQV------------VYPEAIAQVVSTIAAQNQGISELETAILETV 375 >gi|294625013|ref|ZP_06703663.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666614|ref|ZP_06731853.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600688|gb|EFF44775.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603634|gb|EFF47046.1| GTP-binding protein EngA [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 465 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR-----LDEQQPFIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ + R + + L V ++D R G +D ++ ++L K Sbjct: 56 VDTGGI---AGDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +V+ KID T + + +V+ S+ R+GI+ L + Sbjct: 111 ARPTVLVINKIDGTDEETVRSEFARY---------GFSDVVALSAAHRQGIDELLDEV 159 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ +L+ + Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDLERDGRQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 228 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIEQCQVAVLMLDATEGVTDQDATILGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + E + S++ G+ L A Sbjct: 286 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVNWAEAVRISALHGSGMRELFHA 343 Query: 206 I 206 I Sbjct: 344 I 344 >gi|148360408|ref|YP_001251615.1| GTP-binding protein Era [Legionella pneumophila str. Corby] gi|148282181|gb|ABQ56269.1| GTP-binding protein Era [Legionella pneumophila str. Corby] Length = 311 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 16/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K L+ TS P T+H + + + VD Sbjct: 24 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTE------DEFQFVYVDT 76 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A + +S + + L+D H K D+ V + + + V Sbjct: 77 PGIHQGNA----KAINRMMNKTAISVLRDVDVIAFLVDGTH-WKDEDEYVLNLIKQAKVP 131 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+DK++ T + L + + + Y A +IP S+ ++ L + Sbjct: 132 CILVVNKVDKITDKT--QLLPWIEQISQRYQFAA--IIPLSAKTGLQVDELEGKL 182 >gi|21242765|ref|NP_642347.1| GTP-binding protein EngA [Xanthomonas axonopodis pv. citri str. 306] gi|325927625|ref|ZP_08188854.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Xanthomonas perforans 91-118] gi|26006715|sp|Q8PKY6|DER_XANAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|21108245|gb|AAM36883.1| GTP-binding protein [Xanthomonas axonopodis pv. citri str. 306] gi|325541992|gb|EGD13505.1| small GTP-binding protein domain/GTP-binding hypothetical protein [Xanthomonas perforans 91-118] Length = 465 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR-----LDEQQPFIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ + R + + L V ++D R G +D ++ ++L K Sbjct: 56 VDTGGI---AGDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +V+ KID T + + +V+ S+ R+GI+ L + Sbjct: 111 ARPTVLVINKIDGTDEETVRSEFARY---------GFSDVVALSAAHRQGIDELLDEV 159 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ +L+ + Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDLERDGRQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 228 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIEQCQVAVLMLDATEGVTDQDATILGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + E + S++ G+ L +A Sbjct: 286 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVNWAEAVRISALHGSGMRELFQA 343 Query: 206 I 206 I Sbjct: 344 I 344 >gi|260101321|ref|ZP_05751558.1| GTP-binding protein Era [Lactobacillus helveticus DSM 20075] gi|260084906|gb|EEW69026.1| GTP-binding protein Era [Lactobacillus helveticus DSM 20075] gi|328465883|gb|EGF37066.1| GTPase Era [Lactobacillus helveticus MTCC 5463] Length = 301 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 11 VALLGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SDKMQVVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + LS + + V +++ + + DQ + + L + V Sbjct: 64 PGI---FKPHSKLDDYMD--KASLSSLNDVDLVLFMVEP-EEIGKGDQYIANLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ P ++ L E++P S+ + GIE L I + + Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDLLNTINKYL 171 >gi|153815591|ref|ZP_01968259.1| hypothetical protein RUMTOR_01827 [Ruminococcus torques ATCC 27756] gi|145847022|gb|EDK23940.1| hypothetical protein RUMTOR_01827 [Ruminococcus torques ATCC 27756] Length = 298 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 17/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ V L + VD Sbjct: 10 VTLIGRPNVGKSTLMNHLIGQK-IAITSNKPQTTRNRIQTV------LTTEEGQIVFVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A K + + I + + V L++ + D+ + L K Sbjct: 63 PGIHKA---KNKLGEYMVNIAE--RSLNEVDVVLWLVEPSAFIGAGDRHIIEQLKKVKTP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID + ++ + E++P S+ + L K IL+ + Sbjct: 118 VILVINKIDMVKKEEILTFIDAYRKE-----YDFAEIVPVSARSGDNTDELIKVILKYLP 172 Query: 212 Y 212 Y Sbjct: 173 Y 173 >gi|296532289|ref|ZP_06895028.1| ribosome-associated GTPase EngA [Roseomonas cervicalis ATCC 49957] gi|296267365|gb|EFH13251.1| ribosome-associated GTPase EngA [Roseomonas cervicalis ATCC 49957] Length = 445 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 20/174 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L RK LA + PG T+ + + + A+ L Sbjct: 2 LPRIAIIGRPNVGKSTLFNRLAGRK-LAIVDDTPGVTRD------RKETEARLGGRAVLL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G AP V G + + V ++D R G+ D+ ++L ++ Sbjct: 55 LDTAGLE--EAPPDTVA--GRMRASSEAAIRDADLVLFVVDARAGITPSDRAFAAWLRRQ 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V +V K + + Y + + S+ +GI L Sbjct: 111 SVPVLLVANKT-----EGRGGGMAAYEA----YELGLGDPVAISAEHGEGIADL 155 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 8/185 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ P +A GR N GKS+L+N L+ + + T PG T+ D + K Sbjct: 174 RSRPLRLAIVGRPNAGKSTLLNALLGEERM-ITGPEPGLTRDAVAVEWTDETGGK----- 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + LVD G + ++ + ++ L++D G+ + D + Sbjct: 228 VRLVDTAGMRKKARIIEGLEQMS--VAATIAALKEAEAAILVLDANLGMDEQDLRIARLA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +++ + I K D + A EV+ S++ +G+E L A Sbjct: 286 EREGRAVIIAFNKWDAVEDRAACRRKLDDVLTASLAQLKGVEVVTLSAMTGRGVERLMPA 345 Query: 206 ILETI 210 + +T+ Sbjct: 346 VRQTV 350 >gi|172035176|ref|YP_001801677.1| GTP-binding protein EngA [Cyanothece sp. ATCC 51142] gi|226706247|sp|B1X0B0|DER_CYAA5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|171696630|gb|ACB49611.1| GTP-binding protein [Cyanothece sp. ATCC 51142] Length = 452 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 13/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + +P LP ++ GR NVGKSSL+N + + A S G T+ Sbjct: 162 ITYLPSPDELPDREEINVSIIGRPNVGKSSLLNAFLGEQR-AIVSPISGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ L+D G + + + I R V L+ID GV Sbjct: 216 -DTVVERGDNTYRLIDTAGIRRKKNVNYGAEFFS--INRAFKAIRRADVVLLVIDAIDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D + + + + IV+ K D + + K K + R Y ++I S++ Sbjct: 273 TDQDIKLADRIIDEGRAAIIVVNKWDAVEKDSYTIYDYKQKVMDRLYFMEWADIIFVSAM 332 Query: 195 KRKGIEVLRKAILETIN 211 K +E I E ++ Sbjct: 333 SGKRVE----NIFELVD 345 Score = 98.3 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A + PG T+ + + + Sbjct: 3 LPIVAIIGRPNVGKSTLVNRLA-KDRQAIVHDQPGITRD------RTYRPAFWCDRDFQV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + ++ + ++D + G D+++ +L ++ Sbjct: 56 VDTGGLVF----DDDTEFLPLIREQAMAALTEASAAIFVVDGQLGPTAGDREISDWLRRQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + + E P S + G L ++ Sbjct: 112 KVPVLLAVNKC--------ESPEMGLIQAAEFWELGLGEPYPISGIHGSGTGELLDQLIT 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|225374467|ref|ZP_03751688.1| hypothetical protein ROSEINA2194_00082 [Roseburia inulinivorans DSM 16841] gi|225213705|gb|EEG96059.1| hypothetical protein ROSEINA2194_00082 [Roseburia inulinivorans DSM 16841] Length = 449 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 17/188 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P+IA G+ NVGKSSLIN L +++ S+ G T+ +++K N Sbjct: 181 EDDRPKIAIIGKPNVGKSSLINKLA-QEDRVIVSDIAGTTRDAI------DTDIKYNGKE 233 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ ++ID GV + D + Sbjct: 234 YVFIDTAGLRRKNKIKEEIERYS--IIRAVTAVERADVCIIVIDATEGVTEQDAKIAGIA 291 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + I + K D + EK + ++ P A E+I S+ + + Sbjct: 292 HDRGKGIIIAVNKWDAIEKDDKTIYRHTEKIRDILSFMPYA--EIIFISAKSGQRL---- 345 Query: 204 KAILETIN 211 I ETI+ Sbjct: 346 NKIFETID 353 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + ++ + PG T+ + ++ Sbjct: 11 PVVAIVGRPNVGKSTLFNALAGER-ISIVQDTPGVTRDRIYAEVSWLD------HNFTMI 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P N + + +T + ++D R G++ D V L + Sbjct: 64 DTGGI----EPDSNDIILSQMREQAEIAIATADVIMFIVDVRQGLQDSDSKVADMLRRSG 119 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + Y + P S+ G+ + +++ Sbjct: 120 KPVVLVVNKVDSFEK--------YMADVYEFYNLGIGDPFPVSAASMLGLGDMLDEVVKY 171 >gi|78047628|ref|YP_363803.1| GTP-binding protein EngA [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123743974|sp|Q3BTW0|DER_XANC5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78036058|emb|CAJ23749.1| GTP-binding protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 465 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR-----LDEQQPFIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ + R + + L V ++D R G +D ++ ++L K Sbjct: 56 VDTGGI---AGDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +V+ KID T + + +V+ S+ R+GI+ L + Sbjct: 111 ARPTVLVINKIDGTDEETVRSEFARY---------GFSDVVALSAAHRQGIDELLDEV 159 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ +L+ + Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDLERDGRQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 228 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIEQCQVAVLMLDATEGVTDQDATILGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + E + S++ G+ L +A Sbjct: 286 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVNWAEAVRISALHGSGMRELFQA 343 Query: 206 I 206 I Sbjct: 344 I 344 >gi|260910017|ref|ZP_05916700.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 472 str. F0295] gi|260635847|gb|EEX53854.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 472 str. F0295] Length = 437 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G P A GR NVGKSS+IN + + G T+ + F Sbjct: 172 EDGIPRFAVVGRPNVGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRFDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L+ID G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEFYSVM--RSIRSIEHSDVCILMIDATRGIEAQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 K S +V+ K D ++ Q+ ++ + IR P +I S++ ++ I Sbjct: 283 QKNQKSLVVVVNKWDLVADKD-QKVIKTFENAIRERMAPFVDFPIIFASALTKQRI 337 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A S+ G T+ + + ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRS-AIVSDTAGTTRDRQY------GKCDWSGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G+ D + I R L V L+D GV +D+DV L + V Sbjct: 58 GGWVVNSD-----DIFEDAIRRQVLVATEEADLVLFLVDVNTGVTDLDEDVAQILRRTKV 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D E+ Y + P S+ G L A++E + Sbjct: 113 PVLLVVNKAD---------NNEQIYEAPVFYSLGLGDPFPISAATGSGTGDLLDAVIEKL 163 >gi|84624044|ref|YP_451416.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|161898989|ref|YP_201168.2| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae KACC10331] gi|188576711|ref|YP_001913640.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576902|ref|YP_001913831.1| GTP-binding protein EngA [Xanthomonas oryzae pv. oryzae PXO99A] gi|123752759|sp|Q2P2T5|DER_XANOM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|84367984|dbj|BAE69142.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521163|gb|ACD59108.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521354|gb|ACD59299.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 465 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR-----LDEQQPFIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + R + + L V ++D R G +D ++ ++L K Sbjct: 56 VDTGGI---AGDEDGLAGATARQARAAAGEADL--VLFVVDGREGESSLDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +V+ KID T + + +V+ S+ R+GI+ L + + Sbjct: 111 ARPTVLVINKIDGTDEETVRSEFARY---------GFSDVVALSAAHRQGIDELLEEV 159 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ +L+ + Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDLERDGRQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 228 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIERCQVAVLMLDATEGVTDQDATILGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + + E + S++ G+ L +A Sbjct: 286 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVSWAEAVRISALHGSGMRELFQA 343 Query: 206 I 206 I Sbjct: 344 I 344 >gi|254481405|ref|ZP_05094650.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2148] gi|214038568|gb|EEB79230.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2148] Length = 299 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H + + N + VD Sbjct: 11 VAIVGRPNVGKSTLLNHILGQK-ISITSRKPQTTRHQVLGIKTE------NDSQVIFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A + + S + + LID R + DQ V + + + Sbjct: 64 PGLHKA----EEKAINRYMNRAASSAIKHVDLILFLID-RTAWTEEDQMVLEQVQRTRIP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D L L + L ++P S+++++ +++L + IL+ + Sbjct: 119 TLLVVNKVDLLEDKNI--LLPHLQELADR--GEFEAIVPVSALRQRNVDMLEQEILKYM 173 >gi|58426746|gb|AAW75783.1| GTP-binding protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 490 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 27 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR-----LDEQQPFIV 80 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + R + + L V ++D R G +D ++ ++L K Sbjct: 81 VDTGGI---AGDEDGLAGATARQARAAAGEADL--VLFVVDGREGESSLDDEILAWLRKL 135 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +V+ KID T + + +V+ S+ R+GI+ L + + Sbjct: 136 ARPTVLVINKIDGTDEETVRSEFARY---------GFSDVVALSAAHRQGIDELLEEV 184 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ +L+ + Sbjct: 200 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDLERDGRQ 252 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 253 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIERCQVAVLMLDATEGVTDQDATILGAI 310 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + + E + S++ G+ L +A Sbjct: 311 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVSWAEAVRISALHGSGMRELFQA 368 Query: 206 I 206 I Sbjct: 369 I 369 >gi|317056789|ref|YP_004105256.1| ribosome-associated GTPase EngA [Ruminococcus albus 7] gi|315449058|gb|ADU22622.1| ribosome-associated GTPase EngA [Ruminococcus albus 7] Length = 443 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 13/178 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ NVGKSSLIN + + + S+ G T+ ++++N +D Sbjct: 179 KVAVIGKPNVGKSSLINRICGEERV-IVSDIAGTTRD------ATDTDIENEFGKFVFID 231 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++V+ + L +R+ ++ID G + D V + +K Sbjct: 232 TAGIRRKSKVLESVEKYSVLRAYMAVDRAD--VAVIVIDATVGFTEQDSKVAGYAHEKGK 289 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K D L +T+ + + + N ++ + S+ I+ L + I Sbjct: 290 ACVVAVNKWDALEKDG--KTMNEFRKKLENDFSFMSYVPFVFVSAKTGLRIDKLFEMI 345 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L+ ++ L+ + PG T+ + + L Sbjct: 3 LPVVAVVGRPNVGKSTLFNKLIGQR-LSIVEDTPGVTRDRIY------GKCEWLGREFML 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G P+ N + + ++ + L+ D + GV D +V L K Sbjct: 56 VDTGGI----EPESNDIILSQMRRQSELAITSANVIILVTDIKSGVTSTDMEVAQMLLKS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D + L Y E P SSV G + +L+ Sbjct: 112 GKPVVLCVNKVDNVGEPPM--------ELYEFYNLGLGEPFPVSSVHGHGTGDMLDEVLK 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|87125615|ref|ZP_01081460.1| putative GTP-binding protein [Synechococcus sp. RS9917] gi|86166915|gb|EAQ68177.1| putative GTP-binding protein [Synechococcus sp. RS9917] Length = 455 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 76/189 (40%), Gaps = 16/189 (8%) Query: 21 IGLLPKAG-------PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP P ++A GR NVGKSSL+N + A S G T+ Sbjct: 162 LTFLPPKDQEGDEAEPIQMAIIGRPNVGKSSLLNAICGEPR-AIVSPIRGTTRDTI---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L+ N + LVD G R+ + +G I R L+ID G Sbjct: 217 --DTRLERNGLSWRLVDTAGIRRRRSVHYGPEFFG--INRSFKAIERSDVCVLVIDALDG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + DQ + ++++ + +V+ K D + + + + + Y ++ TS+ Sbjct: 273 VTEQDQRLAGRIEEEGRACVVVVNKWDAVEKDSHTMPAMEKELRAKLYFLDWAPMLFTSA 332 Query: 194 VKRKGIEVL 202 + + ++ + Sbjct: 333 LTGQRVDSI 341 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L R A + PG T+ + + + L Sbjct: 3 RPVVAIIGRPNVGKSTLVNRLC-RSREAIVHDEPGVTRD------RTYQDGYWGDREFKL 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + + +++D + GV D+ + +L + Sbjct: 56 VDTGGLVF----DDDSEFLPEIREQASLAMAEASVAVVIVDGQQGVTAADESIAEWLRSQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 A + + K + + + E P S++ G L +L Sbjct: 112 ACPTLLAVNKC--------ESPEQGLAMAAEFWGLGLGEPYPISAIHGAGTGELLDQVLT 163 Query: 209 TI 210 + Sbjct: 164 FL 165 >gi|317502138|ref|ZP_07960316.1| GTP-binding protein Era [Lachnospiraceae bacterium 8_1_57FAA] gi|331090350|ref|ZP_08339233.1| GTP-binding protein Era [Lachnospiraceae bacterium 3_1_46FAA] gi|316896455|gb|EFV18548.1| GTP-binding protein Era [Lachnospiraceae bacterium 8_1_57FAA] gi|330401305|gb|EGG80893.1| GTP-binding protein Era [Lachnospiraceae bacterium 3_1_46FAA] Length = 298 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 17/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ V L + VD Sbjct: 10 VTLIGRPNVGKSTLMNHLIGQK-IAITSNKPQTTRNRIQTV------LTTEEGQIVFVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A K + + I + + V L++ + D+ + L K Sbjct: 63 PGIHKA---KNKLGEYMVNIAE--RSLNEVDVVLWLVEPSAFIGAGDRHIIEQLKKVKTP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID + ++ + E++P S+ + L K IL+ + Sbjct: 118 VVLVINKIDMVKKEEILTFIDAYRKE-----YDFAEIVPVSARSGDNTDELIKVILKYLP 172 Query: 212 Y 212 Y Sbjct: 173 Y 173 >gi|316934143|ref|YP_004109125.1| GTP-binding protein Era [Rhodopseudomonas palustris DX-1] gi|315601857|gb|ADU44392.1| GTP-binding protein Era [Rhodopseudomonas palustris DX-1] Length = 308 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + S T+ L + + + + LVD Sbjct: 18 VALIGAPNVGKSTLVNALVGSK-VTIVSRKVQTTRALIRGIVIE------DASQIILVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ +D ++ S V +L+D R G+ + +D+ + L Sbjct: 71 PGI---FAPKRRLDR--AMVKTAWSGAHDADLVCVLLDARAGINEQAEDILANLANVDRP 125 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID ++ + + A + S++ G++ LRKA+ + Sbjct: 126 KLLVLNKIDLIAREKLLALAQAANQRL-----AFDQTFMVSALTGDGVDDLRKALAAQV 179 >gi|149277444|ref|ZP_01883585.1| GTP-binding protein EngA [Pedobacter sp. BAL39] gi|149231677|gb|EDM37055.1| GTP-binding protein EngA [Pedobacter sp. BAL39] Length = 433 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 74/184 (40%), Gaps = 15/184 (8%) Query: 20 EIGLLPK--AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 +P+ P+I GR NVGKSSLIN L+ ++ + G T+ F Sbjct: 162 HFEDIPEEENALPKITIVGRPNVGKSSLINALIGKERN-IVTPIAGTTRDSIHIHYNQFG 220 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 +D G K+N++ + + R + V L+ID G++ Sbjct: 221 ------HEFMFIDTAGLRKKTKVKENIEFYSVM--RTIKALEEADVVVLMIDAMEGLESQ 272 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVK 195 D ++F +K I++ K D + +T++ + IR P +I TS + Sbjct: 273 DVNIFHLAEKNKKGIVILVNKWDLVEKD--SKTIKIFEDQIRQKLQPFTDVPIIFTSVLN 330 Query: 196 RKGI 199 ++ I Sbjct: 331 KQRI 334 Score = 97.9 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 61/178 (34%), Gaps = 20/178 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N L + A + G T+ + + + + ++D Sbjct: 5 IAIVGRPNVGKSTLFNRLTESRK-AIVDDFSGVTRD------RHYGSAEWTDKQFTVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 GY ++ + ++D G+ +D D+ L + Sbjct: 58 GGYVANSEDVFEAAIREQVV----IAIEEATVLLFMVDVVTGITDLDDDIAQLLRRSKKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 IV+ K+D + Y E+ P SS+ G L +++ Sbjct: 114 VFIVVNKVD---------NTQLQNDASVFYGFGLGEIYPISSMTGSGTGDLLDEVIKH 162 >gi|291279462|ref|YP_003496297.1| small GTP-binding protein [Deferribacter desulfuricans SSM1] gi|290754164|dbj|BAI80541.1| small GTP-binding protein [Deferribacter desulfuricans SSM1] Length = 438 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 23/181 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L N L K +A + PG T+ ++ + +VD Sbjct: 4 VGIIGRPNVGKSTLFNRLAG-KRIAIVDDMPGVTRDRLEYIA------EWEGKKFKIVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 GY K +I ++ + LL+D + G+ +D+ V + L ++ Sbjct: 57 CGYDLREELLKK-----EMIKQFYASLDEADFFVLLVDAKEGLHPLDEMVCNILREREKK 111 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + +V K+D + ++ Y E+IP S+ K +++L I+E N Sbjct: 112 FIVVANKVD---------NEKLQSFVADFYQLGVEEIIPISATHGKNVDILLDKIIE--N 160 Query: 212 Y 212 Y Sbjct: 161 Y 161 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 65/173 (37%), Gaps = 10/173 (5%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 ++ GR NVGKSSLIN + + L + PG T+ + + N Sbjct: 172 DSIKVVVVGRPNVGKSSLINSWLGDERL-IVTPIPGTTRDSV------DTYFEYNSKKYT 224 Query: 88 LVDMPGYGYARAP-KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G K ++ +G R+ + LID GV + D V + Sbjct: 225 LIDTAGIRKKSVMFKDKIEKYGFYRSYDAIRRADI--AVGLIDATEGVTERDVKVIADAY 282 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + + K D ++ K + + +P VI S++ RK I Sbjct: 283 EAGRPVVLAINKWDAINKDEKVGKKFKEEIAEKFKFLNNPPVIFISALTRKNI 335 >gi|262280930|ref|ZP_06058713.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] gi|262257830|gb|EEY76565.1| conserved hypothetical protein [Acinetobacter calcoaceticus RUH2202] Length = 469 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 20/189 (10%) Query: 23 LLPKAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +P+ PE +A GR NVGKS+L+N L+ + + PG T+ + Sbjct: 161 DVPEDENPEEHDKATGLRLAIIGRPNVGKSTLVNRLLGEDRVV-AFDQPGTTRDSIYI-- 217 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + L+D G + ++ + IV+ L + +++D R G Sbjct: 218 ----PFERDGRQYTLIDTAGVRRKGKVDEMIEKFS--IVKTLQAIKDAHVIVVVLDAREG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + D + + + + I + K D ++ ++ P A +V S+ Sbjct: 272 VVEQDLHLIGYALEAGRAMVIAINKWDNMTEYDRKQCKLDVDRRFDFIPWA--KVHLISA 329 Query: 194 VKRKGIEVL 202 + G+ + Sbjct: 330 LHGTGVGEM 338 Score = 87.5 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 67/178 (37%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + + A ++ G T+ + + + +V Sbjct: 3 PVIALIGRPNVGKSTLFNQIT-KSRDALVADFAGLTRDRKY------GDATYQNKSFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G N + + + + + ++D R G+ D+ + L Sbjct: 56 DTGGIGENEGGIDN-----YMAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K+D + A L+ Y E + ++ +G++ + + +L Sbjct: 111 KKVYLVANKVDGVHAEAA---------LVEFYKLGMGEPLQVAASHGRGVQQMLEDVL 159 >gi|160915095|ref|ZP_02077308.1| hypothetical protein EUBDOL_01103 [Eubacterium dolichum DSM 3991] gi|158432894|gb|EDP11183.1| hypothetical protein EUBDOL_01103 [Eubacterium dolichum DSM 3991] Length = 436 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 75/198 (37%), Gaps = 9/198 (4%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P+ G GR NVGKSSL+N ++++ + SN G T+ Sbjct: 160 VHSFPKKAFNEYEGMTRFCLIGRPNVGKSSLVNAILDQDRV-IVSNIEGTTRDAI----- 213 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++D G +N++ + L ERS V ++ID G+ Sbjct: 214 -DTPFTREGKDYVVIDTAGIRRRGKVYENIEKYSVLRAMSAIERSD--VVLVVIDGETGI 270 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 ++ D+ V + + IV K D + + + + ++ S++ Sbjct: 271 REQDKHVAGYAHEAGKGVIIVYNKWDAVEKDERTMVKIEKEIYAHFLYLNYAPIVFVSAL 330 Query: 195 KRKGIEVLRKAILETINY 212 K++ I L I E +Y Sbjct: 331 KKQRIHTLLPMIDEVHDY 348 Score = 94.5 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 21/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS++ N ++ + + + PG T+ + + + L+D Sbjct: 6 VAIVGRPNVGKSTIFNRIIGERK-SIVEDTPGVTRDRIYGKAEWLTK------EFRLIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + I + ++ R GV + D+ + L K Sbjct: 59 GGIQLEDQDFQQEIQMQVEI-----AIEEADAIVFVVSGREGVTRDDEYIARLLQKTNKK 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + KID E+L+ + Y + I S GI + I+ Sbjct: 114 IILAVNKID-------DESLQP--SIYEFYQLGVGDPIAVSGSHGIGIGDILDEIV 160 >gi|307609736|emb|CBW99247.1| hypothetical protein LPW_10281 [Legionella pneumophila 130b] Length = 295 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 16/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K L+ TS P T+H + + + VD Sbjct: 8 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTE------DEFQFVYVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A + +S + + L+D H K D+ V + + + V Sbjct: 61 PGIHQGNA----KAINRMMNKTAISVLRDVDVIAFLVDGTH-WKDEDEYVLNLIKQAKVP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+DK++ T + L + + + Y A +IP S+ ++ L + Sbjct: 116 CILVVNKVDKITDKT--QLLPWIEQISQRYQFAA--IIPLSAKTGLQVDELEGKL 166 >gi|292492503|ref|YP_003527942.1| small GTP-binding protein [Nitrosococcus halophilus Nc4] gi|291581098|gb|ADE15555.1| small GTP-binding protein [Nitrosococcus halophilus Nc4] Length = 464 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 + A GR NVGKS+L+N L+ + + + APG T+ + LVD Sbjct: 178 QFAVVGRPNVGKSTLVNRLLGEERV-LSFEAPGTTRDSIAI------PFCHQGQDYTLVD 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + I + L + V L+ID R GV + D + + + Sbjct: 231 TAGIRRRSKILDMLEKFS--IAKTLEAIEAAQVVILVIDAREGVVEQDLHLAGLILESGK 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + I + K D LS ++ + A V S++ G+ L +I + Sbjct: 289 AVVIAVNKWDGLSSDQRRKVKADLDRRLPFLDFA--RVHFISALHGSGVGELFPSIDKA 345 Score = 96.4 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 68/175 (38%), Gaps = 21/175 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A ++ PG T+ + + + + +VD Sbjct: 5 VALVGRPNVGKSTLFNRLTRSRD-ALVADQPGVTRDRKYGIAR------YGEQSFLVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ + V+ + L+D R G+ +D+ + L + Sbjct: 58 GGI-----TEQESGVGELMRVQAQLAIEEADIILFLVDGREGLSALDETIAEQLRRAQKP 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++V+ K + QE + Y E S+ + +G+ L + + Sbjct: 113 LKLVINK----TEGRDQELVAS-----EFYRLGLGEPATISAQQGQGVGGLLQDL 158 >gi|78778772|ref|YP_396884.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9312] gi|123554591|sp|Q31CE7|DER_PROM9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78712271|gb|ABB49448.1| Small GTP-binding protein domain [Prochlorococcus marinus str. MIT 9312] Length = 457 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 19/199 (9%) Query: 21 IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 IG LP+ E ++ GR NVGKSSL+N + K A S+ G T Sbjct: 162 IGELPENNIQEEEEKIMMSIIGRPNVGKSSLLNSISGEKR-AIVSDISGTTTDSI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + +K +VD G + K + +G I R L+ID GV Sbjct: 216 -DTLIKKGDTQWKIVDTAGIRRKKNVKYGTEFFG--INRAFKSIDRSDVCVLVIDAIDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTS 192 DQ + ++++ + IV+ K D + T+ + + +R+ Y ++I S Sbjct: 273 TDQDQKLAGRIEEQGRACIIVINKWDLVEKN--SSTIYQVEKELRSKLYFLHWSKMIFIS 330 Query: 193 SVKRKGIEVLRKAILETIN 211 ++ + ++ + + L+ +N Sbjct: 331 ALTGQRVDNIFEHALKAVN 349 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L+N L + N A + PG T+ + + N + Sbjct: 3 LPTIAIIGRPNVGKSTLVNRLC-QSNDAIVFDKPGVTRD------RTYQNASWGGKEFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + L++D GV D + +L Sbjct: 56 VDTGGLVFDDDSEFLPEIRAQV----FLALEEASLALLVVDGNQGVTDGDLSIAKWLRNS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + I + K + T + E P S++ G L ++ Sbjct: 112 SCKTIIAVNKC--------ESTTLGISLASEFWKLGLGEPYPVSAIHGSGTGDLLDLVI 162 >gi|301632619|ref|XP_002945379.1| PREDICTED: hypothetical protein LOC100487340 [Xenopus (Silurana) tropicalis] Length = 937 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 11/182 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 GP ++A +GR NVGKS+LIN + + L + PG T+ + Sbjct: 187 GPVKLAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRDAI------SVPFERQGQKFE 239 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G + ++ + +V+ L + V LL+D GV D + ++ + Sbjct: 240 LIDTAGLRRKGRVFEAIEKFS--VVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILE 297 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + I + K D + Q + + + S+ KR+G+ L +I+ Sbjct: 298 SGRAVVIAVNKWDAVDDYQRQMLGRSIEARLS--FLKFANLHFISAQKRQGLGPLWTSIM 355 Query: 208 ET 209 + Sbjct: 356 QA 357 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ G T+ + + N + A ++ Sbjct: 10 PVIALVGRPNVGKSTLFNRLTRSRD-AIVADFAGLTRD------RHYGNGRQGKHAYIVI 62 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + + V ++D R GV D + ++L + Sbjct: 63 DTGGF----EPDASSGIFREMAKQTRQAVAESDVVLFVVDARAGVSAQDHGISNYLRRLG 118 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K E ++ L Y EV P S+ +G+ L + LE Sbjct: 119 KPCLLVANKA---------EGMQSGAQLSEFYELGLGEVYPVSAAHGQGVRGLVERALEP 169 Query: 210 IN 211 +N Sbjct: 170 LN 171 Score = 65.2 bits (158), Expect = 5e-09, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 29/188 (15%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLA-----RTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 I+ G +N GKS+L N LV + A T + T+ L L++ ++ Sbjct: 749 ISLVGYTNAGKSTLFNALVKARAYAADQLFATLDT--TTRQLY---------LQDAGRSV 797 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD----VF 142 +L D G+ P VD++ L E + ++D + V Sbjct: 798 SLSDTVGFIRDL-PHGLVDAFQAT----LQEAVDADLLLHVVDAANPHFPEQIQQVQTVL 852 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +D + +V K+D L+P L+ + Y + P P V S+ +G++ L Sbjct: 853 ADIDAVDIPQLLVFNKLDALAPEQRSLQLQDS-YEMDGRPV--PRVFL-SARTGEGLQAL 908 Query: 203 RKAILETI 210 R+ + T+ Sbjct: 909 RQQLAATV 916 >gi|118373644|ref|XP_001020015.1| conserved hypothetical protein [Tetrahymena thermophila] gi|89301782|gb|EAR99770.1| conserved hypothetical protein [Tetrahymena thermophila SB210] Length = 336 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 8/150 (5%) Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 G T+ L ++ D ++D PGYG+A W G+I Y+ S Sbjct: 113 KQGSTKKLYYYELVDNLG--------YIIDPPGYGFANVNVNAKKKWQGMIYDYIQISSR 164 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 L +YLLI+ HG+K+ D + S + K+ V+ QIVLTK DK+ +T+ ++ Sbjct: 165 LARIYLLINAEHGLKKNDMSLLSQIQKQNVNIQIVLTKADKVPERALYDTMLSIGMQVKG 224 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + HP + S+ GI LR +I +++ Sbjct: 225 FNNIHPLLHACSARNGFGIPELRHSIFDSL 254 >gi|59712693|ref|YP_205469.1| GTP-binding protein Era [Vibrio fischeri ES114] gi|59480794|gb|AAW86581.1| membrane-associated, 16S rRNA-binding GTPase [Vibrio fischeri ES114] Length = 321 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V D VD Sbjct: 30 IAIVGRPNVGKSTLLNQILGQK-ISITSRKPQTTRHRIMGVDTD------GDYQAIYVDT 82 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R + S + V L+D H D+ V + L K Sbjct: 83 PGLHI-----EEKRAINRLMNRAANSSLSDVNLVLFLVDGTH-WTPDDEMVLNKLKKSEF 136 Query: 151 SYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +++ K+D + L++ + +V+P S+ ++V+ K + E Sbjct: 137 PTVLLVNKVDNVKDKKDVMTHLQEMTEKM-----DFVDVVPISAKTGSNVDVVHKLVREY 191 Query: 210 I 210 + Sbjct: 192 L 192 >gi|109899427|ref|YP_662682.1| GTP-binding protein EngA [Pseudoalteromonas atlantica T6c] gi|123170868|sp|Q15R60|DER_PSEA6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|109701708|gb|ABG41628.1| small GTP-binding protein [Pseudoalteromonas atlantica T6c] Length = 482 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 11/185 (5%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A P ++A G+ NVGKS+L N ++ + + + PG T+ F ++ + Sbjct: 192 ASPIKLAIVGKPNVGKSTLTNRILGEERVV-VYDQPGTTRDSIFI------PMERDDREY 244 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G R+ + V+ + IV+ L V L+ID + GV D + F+ Sbjct: 245 VLIDTAGVRRRRSISEAVEKFS--IVKTLQAIEEANVVLLVIDAQEGVTDQDLSLLGFVL 302 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 S + + K D L+ E + + + S++ + L +++ Sbjct: 303 NSGRSLVVAVNKWDGLAKDVKDEIKRELDRRLG--FIDFARLHYISALHGTNVGHLFESV 360 Query: 207 LETIN 211 E N Sbjct: 361 QEAYN 365 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 51/135 (37%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQAN------YEGLQFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L V L+D R G+ DQ + L K+ Sbjct: 55 VDTGGI-----SGDEQGIDMAMANQSLMAIDEADVVLFLVDARAGLTAADQGIAEHLRKQ 109 Query: 149 AVSYQIVLTKIDKLS 163 S +V K+D + Sbjct: 110 NKSVYVVANKVDGID 124 >gi|317484901|ref|ZP_07943790.1| ribosome-associated GTPase EngA [Bilophila wadsworthia 3_1_6] gi|316923839|gb|EFV45036.1| ribosome-associated GTPase EngA [Bilophila wadsworthia 3_1_6] Length = 452 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 11/183 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P+IA GR NVGKS+L N L+ R N A T + PG T+ V + S L Sbjct: 2 LPKIALLGRPNVGKSTLFNRLI-RSNRAITHDRPGVTRDRMEGVVRSRSGRSFTLIDTGG 60 Query: 89 VDMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 V + + A P+ ++ + + L++D R G+ D+ + SF+ + Sbjct: 61 VTLDSHHSVADGPEGLRGFEAEILQQTQAAMDEASVFCLVVDGRDGLMPFDEHLASFVRR 120 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D +E ++ + ++ S+ I L + ++ Sbjct: 121 AGKPTLLVVNKVD---------GMEHEDTMLAEFHALGFPILALSAEHGHNIRALEEEMV 171 Query: 208 ETI 210 + + Sbjct: 172 DLL 174 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 79/203 (38%), Gaps = 23/203 (11%) Query: 21 IGLLPKAGP-----PE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + LLP P PE +A GR N GKSSL+N ++ + S+ G T+ Sbjct: 171 VDLLPVEDPDAEAKPENVLRLAMLGRPNAGKSSLVNAMIGEDRM-IVSDVAGTTRDSV-- 227 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 ++ A VD G V+ + + L + +ID Sbjct: 228 ----DIPFVSDGRACEFVDTAGVRRRTRITDTVERFS--VNSSLKTTTKADVTLYVIDAL 281 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 GV D+ + LD++ + I++ KID + + K +++ P H V+ Sbjct: 282 EGVTAQDKRLIDLLDERKTPFMILVNKIDLVGRKEQAALEKNFKEVLQFCP--HVPVLMV 339 Query: 192 SSVKRKG---IEVLRKAILETIN 211 S++K+ G I L I E N Sbjct: 340 SAMKQVGLGRIVPLAAQIREECN 362 >gi|254362978|ref|ZP_04979042.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] gi|153094634|gb|EDN75438.1| possible GTP-binding protein [Mannheimia haemolytica PHL213] Length = 511 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 219 EDKNIKIAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQQ 271 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G V+ + +++ L V L I+ R G+ D + F+ Sbjct: 272 YTIIDTAGVRKRGKVNLAVEKFS--VIKTLQAIQDANVVLLTIEAREGISDQDLSLLGFI 329 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S IV+ K D LS + + + V S++ G+ L + Sbjct: 330 LNAGRSLVIVVNKWDGLSQDIKDQVKSELDRRLD--FIDFARVHFISALHGSGVGNLFDS 387 Query: 206 ILET 209 + E Sbjct: 388 VKEA 391 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 25/186 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + ++ Sbjct: 3 PVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGHANIAGY------DFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ V+ + + L V L+D R G+ D + +L ++ Sbjct: 56 DTGGI---DGTEEGVE--EKMAEQSLLAIEEADVVLFLVDARAGLLPADVGIAQYLRQRE 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG----IEVLRKA 205 + +V K D + + + Y EV ++ + +G IE + Sbjct: 111 KTTVVVANKTDGIDADS---------HCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLAP 161 Query: 206 ILETIN 211 + E +N Sbjct: 162 LGEQLN 167 >gi|297170725|gb|ADI21748.1| predicted GTPases [uncultured actinobacterium HF0130_15N16] Length = 442 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKS+L N L+ + + + PG T+ + ++ L Sbjct: 186 EEEIPGVAIVGRPNVGKSTLFNRLIGDER-SVVHDMPGTTRDAI------DTVVETELGP 238 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + +D G + + + L R L L+ID GV DQ + + Sbjct: 239 LRFIDTAGMRRKARVDDDTEYYSNL--RALRAIDKADVALLVIDSSEGVTSQDQRLAERV 296 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 D I++ K + + + + + + + + V+ S++ +G+ L A Sbjct: 297 DAAGCPIVILMNKWETVDQESKDDLMFQVGQRL--HFLGESPVLRISALTGRGVHRLVSA 354 Query: 206 ILETIN 211 + I+ Sbjct: 355 LEAAID 360 Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 21/182 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++ GR NVGKS+L N ++ R+ A PG T+ + + L Sbjct: 7 LPVVSVVGRPNVGKSTLFNRILGRRE-AIVEEKPGVTRD------RKVLEAEWQGYRFEL 59 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G+ + + S S + L++D GV + D + + L K Sbjct: 60 VDTGGWMPSGNELDDKVSAQSE-----RAISDSDLIVLVVDGTTGVTEEDARIGAILRKS 114 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V+ + + KID + Q ++ +L E + S++ + L +I+ Sbjct: 115 DVAVLLAVNKID-----SNQRDVDIWDFL----SLGLGEPMGVSALHSRNTGDLLDSIVS 165 Query: 209 TI 210 ++ Sbjct: 166 SL 167 >gi|251778692|ref|ZP_04821612.1| ribosome-associated GTPase EngA [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083007|gb|EES48897.1| ribosome-associated GTPase EngA [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 438 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 13/181 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IA G+ NVGKSSLIN L+ + L S+ G T+ S L+ Sbjct: 173 DDEYIRIAMIGKPNVGKSSLINKLLGEERL-IVSDVAGTTRDAI------DSYLETEQGK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+ ++ + +I Y + L+ID + GV + D+ + + Sbjct: 226 FILIDTAGLRRKSKVKEEIERY-SVIRTY-ASIEKADVCILMIDAQDGVTEQDEKIIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 + + +++ K D + +T+EK K ++ P E + S++ + + Sbjct: 284 HELNKAIMVLVNKWDLVEKDD--KTMEKFKKDLQGSLKFMPYAEYLFISALTGQRTHKIL 341 Query: 204 K 204 + Sbjct: 342 E 342 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 20/184 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K ++ + PG T+ + + + Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRISIVQDTPGVTRDRVY------AEAEWLNYNFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P + + + T + ++D + G+ DQ+V + L K Sbjct: 55 MIDTGGI----EPTNDDIIMKQMRRQANIAIETADVIVFIVDGKEGLTAADQEVANMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID L Y + I S+ + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDSLKYEE---------NSWEFYNLGIGDPITISASQALGLGDMLDRVV 161 Query: 208 ETIN 211 E + Sbjct: 162 EHFD 165 >gi|160892719|ref|ZP_02073509.1| hypothetical protein CLOL250_00249 [Clostridium sp. L2-50] gi|156865760|gb|EDO59191.1| hypothetical protein CLOL250_00249 [Clostridium sp. L2-50] Length = 440 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 13/187 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P IA G+ NVGKSS+IN L+ + S+ G T+ + + N Sbjct: 174 EDDRPRIAIIGKPNVGKSSIINKLLGENRV-IVSDIAGTTRDAI------DTEIVRNGTE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K++++ + I+R +S L+ID GV D + Sbjct: 227 YVFIDTAGLRRKSKIKEDIERYS--IIRTVSAVERCNVAVLVIDATEGVTDQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 ++ IV+ K D + +T+ K IR + P E++ S+ + + L Sbjct: 285 HERGKGMIIVVNKWDAVEKDD--KTIYKFTKEIREKLSYMPYAELLFVSAATGQRLPKLF 342 Query: 204 KAILETI 210 + I I Sbjct: 343 ETIDAVI 349 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 68/182 (37%), Gaps = 19/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K ++ + PG T+ + +++ ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEK-ISIVKDTPGVTRDRIY------ADVSWLDYNFTII 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ + + + T + + D R G+ D V L K Sbjct: 57 DTGGI----EPESDNIILKSMREQAEIAIETADVIIFMTDVRQGLVDDDHKVVQMLRKSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + ++ + Y + +P S R GI + ++ Sbjct: 113 KPVILVVNKVD-----SFEKYMNDVYEF---YNLGLGDPVPISGASRLGIGDMLDEVVSH 164 Query: 210 IN 211 + Sbjct: 165 FD 166 >gi|160900447|ref|YP_001566029.1| GTP-binding protein EngA [Delftia acidovorans SPH-1] gi|238687162|sp|A9BMU9|DER_DELAS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|160366031|gb|ABX37644.1| small GTP-binding protein [Delftia acidovorans SPH-1] Length = 448 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 11/175 (6%) Query: 35 SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGY 94 +GR NVGKS+LIN + + L + PG T+ + L+D G Sbjct: 187 AGRPNVGKSTLINTWLGEERLV-AFDMPGTTRDAI------SVPFERAGQKFELIDTAGL 239 Query: 95 GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQI 154 + ++ + +V+ L + V LLID GV D + ++ + + + Sbjct: 240 RRKGRVFEAIEKFS--VVKTLQAIESANVVLLLIDATQGVTDQDAHIAGYVLESGRAVVL 297 Query: 155 VLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + K D + Q + + + S+ KR+G+ L +I++ Sbjct: 298 AVNKWDAVDDYQRQMLERSIETRLS--FLKFAPMHFISAEKRQGLGPLWNSIIQA 350 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 26/185 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L + A ++ G T+ + + + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-KSRDAIVADFAGLTRD------RHYGQGRQGKHEYIVI 55 Query: 90 DMPGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + K+ + + R G+ D D+ +L Sbjct: 56 DTGGFEPDASSGIFKEMARQTQQAVAEADVVVFVVDA-------RLGMSAQDHDIAKYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +V K E +++ L Y +V+P S+ +G+ L Sbjct: 109 RLGKPCVLVANKA---------EGMKEGVQLTEFYELGLGDVLPVSAAHGQGVRDLLDLA 159 Query: 207 LETIN 211 L +N Sbjct: 160 LGQLN 164 >gi|331002901|ref|ZP_08326414.1| GTP-binding protein Era [Lachnospiraceae oral taxon 107 str. F0167] gi|330413194|gb|EGG92568.1| GTP-binding protein Era [Lachnospiraceae oral taxon 107 str. F0167] Length = 298 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TSN P T++ V D + +D Sbjct: 6 VALIGRPNVGKSTLMNTLIGQK-IAITSNKPQTTRNRIQTVFTD------ERGQIVFLDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A+ ++ + V LI+ + + D+ +F L V Sbjct: 59 PGIHKAKN-----KLGEYMVKVSTRTLRDVDMVLWLIEPNTFIGEGDEHIFEILSNLEVP 113 Query: 152 YQIVLTKIDKLSPTTAQ-ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D L + K ++ EV+P S++K + L + I + + Sbjct: 114 VILAINKMDSLKQKEDMLAVIAKYSSKMK-----FAEVVPVSALKGTNTDKLLEIIFKYL 168 >gi|261405616|ref|YP_003241857.1| GTP-binding protein Era [Paenibacillus sp. Y412MC10] gi|261282079|gb|ACX64050.1| GTP-binding protein Era [Paenibacillus sp. Y412MC10] Length = 300 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ V + +D Sbjct: 11 VAIIGRPNVGKSTLMNQVIGQK-IAIMSDKPQTTRNKIHGVYTT------PDSQVVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG K+ + LS + L+D G+ D+ + L K Sbjct: 64 PGIH-----KRQSKLGDYMNQTALSTLGEVEAALFLVDASEGIGGGDRYIAEQLQKIKTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KIDK+ P +E+ + L E++P S+ + L + I + + Sbjct: 119 IILVMNKIDKIEPPALLPLIEQYRKL-----HDFAEIVPISAKLGSNVNTLLEQIQKYL 172 >gi|119486976|ref|ZP_01620848.1| tRNA modification GTPase [Lyngbya sp. PCC 8106] gi|119455905|gb|EAW37039.1| tRNA modification GTPase [Lyngbya sp. PCC 8106] Length = 469 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 17/181 (9%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N ++ + A ++ PG T+ + S L + ++D Sbjct: 227 KVAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDVV------ESQLVVGGIPVQVLD 279 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + V+ G I R + V L ID G + D++++ + + Sbjct: 280 TAGI---RNSEDQVEKIG--IERSQTAAKLADLVLLTIDAEAGWTESDEEIYQQVQHR-- 332 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++L KID++S K + ++ + + T++ +GI L AIL I Sbjct: 333 PLILILNKIDRVSANELD---AKVEEILAKLNRENLLTVKTAAALNQGITELETAILTAI 389 Query: 211 N 211 N Sbjct: 390 N 390 >gi|33865191|ref|NP_896750.1| GTP-binding protein EngA [Synechococcus sp. WH 8102] gi|41017009|sp|Q7U8G2|DER_SYNPX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|33638875|emb|CAE07172.1| putative GTP-binding protein [Synechococcus sp. WH 8102] Length = 455 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 16/189 (8%) Query: 21 IGLLPKAG-------PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP P ++A GR NVGKSSL+N + + A S G T+ Sbjct: 162 LTFLPPKDQEGDEEEPIQMAIIGRPNVGKSSLLNAICGEQR-AIVSPIRGTTRDTI---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +N+ LVD G R+ + +G I R L+ID G Sbjct: 217 --DTNIVRENRPWRLVDTAGIRRRRSVNYGPEYFG--INRSFKAIDRSDVCVLVIDALDG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + DQ + +++ + +V+ K D + + T + + + Y ++ TS+ Sbjct: 273 VTEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTMTAMEKELRAKLYFLDWAPMLFTSA 332 Query: 194 VKRKGIEVL 202 + + ++ + Sbjct: 333 LTGQRVDSI 341 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L R A + PG T+ + + + + Sbjct: 3 RPVVAIIGRPNVGKSTLVNRLC-RSREAIVHDEPGVTRD------RTYQDGYWGDREFKV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + +++D + G+ D+ + FL + Sbjct: 56 VDTGGLVF----DDDSEFLPEIREQAALAMEEASVAVVIVDGQQGITAADESIAEFLRSR 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K + + + E P S++ G L +L Sbjct: 112 PCPTLLAVNKC--------ESPEQGLAMAAEFWSLGLGEPHPISAIHGVGTGDLLDQVLT 163 Query: 209 TI 210 + Sbjct: 164 FL 165 >gi|71065252|ref|YP_263979.1| GTP-binding protein EngA [Psychrobacter arcticus 273-4] gi|123649239|sp|Q4FTW3|DER_PSYA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|71038237|gb|AAZ18545.1| putative GTP-binding protein, HSR1-related [Psychrobacter arcticus 273-4] Length = 473 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 73/189 (38%), Gaps = 11/189 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P + + ++A GR NVGKS+L+N L+ + + PG T+ + Sbjct: 167 PNQENIIEPRGLKLAIIGRPNVGKSTLVNRLLGEDRVV-VFDMPGTTRDSIYI------P 219 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 K + L+D G + V+ + +++ L ++ID G+ D Sbjct: 220 YKRDGKDYVLIDTAGVRRRGKIDEKVEKFS--VIKTLQAIEDSNVTVIVIDAHEGIVDQD 277 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + + + + K D L T Q+ K + R + +V S++ G Sbjct: 278 LHMIGYALDAGRALVVAINKWDGL--TADQKNYIKIEMDRRFNFIPYVKVHQISALHGTG 335 Query: 199 IEVLRKAIL 207 + L +IL Sbjct: 336 VGNLYPSIL 344 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 29/182 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + A ++ G T+ + + A +V Sbjct: 5 PVVALIGRPNVGKSTLFNQFT-KSRQALVADLSGLTRDRQY------GDATYEDKAFIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G G D G I Y+SE+S + ++D R G+ D ++ F Sbjct: 58 DTGGIG-------EADDGRGDIDDYMSEQSYTAIHEADIIVFVVDARAGMIGADAEIGKF 110 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L +V K+D + + E Y E P ++ +G+ L + Sbjct: 111 LHTLGKPVYVVANKVDGVHDSAPAE----------FYALGLGEPYPMAASHGRGVGNLLE 160 Query: 205 AI 206 + Sbjct: 161 VL 162 >gi|103487684|ref|YP_617245.1| GTP-binding protein EngA [Sphingopyxis alaskensis RB2256] gi|98977761|gb|ABF53912.1| Small GTP-binding protein domain [Sphingopyxis alaskensis RB2256] Length = 456 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 63/178 (35%), Gaps = 26/178 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N LV K LA + PG T+ + K +VD Sbjct: 7 IAIVGRPNVGKSTLFNRLVG-KRLALVDDQPGVTRDRR------EGDGKLLGLEFRIVDT 59 Query: 92 PGYGYARA---PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G+ A P + + LID R GV +D+++ +L + Sbjct: 60 AGFEDQDAATLPGRMRAQTEKAVRE-------ADAALFLIDARAGVTPLDEEIARWLRSE 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + K E + L+ Y V S+ +G+ L A+ Sbjct: 113 DTPVILCANKA---------EGKQGEAGLMEAYSLGFETVFALSAEHGEGLVDLFDAL 161 Score = 95.2 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 66/195 (33%), Gaps = 9/195 (4%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + AGP ++A GR N GKS+LIN ++ L T G T+ Sbjct: 173 TAAVDEADEEAAGPMKLAIVGRPNAGKSTLINRMIGEDRL-ITGPEAGITRD--SIRVDW 229 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + + L D G + ++ + L V LL+D G++ Sbjct: 230 RWEKDGEVHEIQLFDTAGMRKRAKVQDKLEKLS--VADALHAVDFAEVVVLLLDATKGLE 287 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSS 193 D + + ++ + + L K D + + + + V+ S Sbjct: 288 AQDLRIADRVLQEGRALIVALNKWDI--AEDPSSLFNGVRAALDDGLSQVKGVPVLSISG 345 Query: 194 VKRKGIEVLRKAILE 208 KGI+ L + E Sbjct: 346 ATGKGIDTLVRVAFE 360 >gi|160903053|ref|YP_001568634.1| small GTP-binding protein [Petrotoga mobilis SJ95] gi|160360697|gb|ABX32311.1| small GTP-binding protein [Petrotoga mobilis SJ95] Length = 460 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 10/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +++ GR NVGKSSL N ++ + A S PG T+ + N Sbjct: 182 DSEEIKVSIVGRPNVGKSSLFNSIIGSER-AIVSEIPGTTRDAIDHLVTMGDN------T 234 Query: 86 MALVDMPGYGYARAPK-KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D G +++ + I R ++ V L++D G+ D+ + Sbjct: 235 FRFIDTAGMRKKSTIHYASIEMFS--ISRTINAIEKSDVVILVVDSTEGITHQDKSIIGI 292 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +K+ I K D +S ++ + Y + ++ TS+ KR GI+ L Sbjct: 293 AEKRGKGTIIAFNKWDLVSNNHQRKEEFFNYFEKELYFVNYSPLVFTSAPKRWGIQELIT 352 Query: 205 AILE 208 AI E Sbjct: 353 AIKE 356 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 72/183 (39%), Gaps = 22/183 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + G+ NVGKS+L N ++ + + + PG T+ S ++ + + LV Sbjct: 4 PTVLIIGKPNVGKSTLFNRMIGERK-SIVHDMPGVTRD------NVSSTIQWDDISFTLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ N++ I+ + V +ID + G+ D + +L K Sbjct: 57 DT--CGIFEQPEDNIEERQKKII--FESLKDVSLVIFVIDGKIGLTSEDYHIADYLRKTN 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K E EK + ++ Y E IP S+ K I L I Sbjct: 113 SKVILVINKA---------ENFEKYELEMKPEIYSLGFGEGIPVSAEHNKNIFTLMDTIA 163 Query: 208 ETI 210 T+ Sbjct: 164 NTL 166 >gi|256811213|ref|YP_003128582.1| GTP-binding protein HSR1-related [Methanocaldococcus fervens AG86] gi|256794413|gb|ACV25082.1| GTP-binding protein HSR1-related [Methanocaldococcus fervens AG86] Length = 215 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 24/163 (14%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GRSNVGKS+ + ++ RK++ + PG T +N + ++ LVDMPG+G Sbjct: 27 GRSNVGKSTFVRLITGRKDV-KVGKKPGVTLKINEY----------DMGEYILVDMPGFG 75 Query: 96 Y-ARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-----------HGVKQIDQDVF 142 Y A PKK + IV Y+ + + +ID + G ID ++F Sbjct: 76 YMAGLPKKIQEKIKDEIVHYIENHADEIAAAVQIIDAKAFFEIVERWEERGEIPIDLEMF 135 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 F+ +S +V K+DK+ E L+ ++ P H Sbjct: 136 DFITDLKISPILVANKMDKIKKEEWDEVLDGICEYLKCQPPWH 178 >gi|54296963|ref|YP_123332.1| GTP-binding protein Era [Legionella pneumophila str. Paris] gi|53750748|emb|CAH12155.1| hypothetical protein lpp1004 [Legionella pneumophila str. Paris] Length = 311 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 16/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K L+ TS P T+H + + VD Sbjct: 24 IALVGRPNVGKSTLLNRILQQK-LSITSRKPQTTRHSILGIRTE------GEFQFVYVDT 76 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A + +S + + L+D H K D+ V + + + V Sbjct: 77 PGIHQGNA----KAINRMMNKTAISVLRDVDVIAFLVDGTH-WKDEDEYVLNLIKQAKVP 131 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+DK++ T + L + + + Y A +IP S+ ++ L + Sbjct: 132 CILVVNKVDKITDKT--QLLPWIEQISQRYQFAA--IIPLSAKTGLQVDELEGKL 182 >gi|154483558|ref|ZP_02026006.1| hypothetical protein EUBVEN_01262 [Eubacterium ventriosum ATCC 27560] gi|149735468|gb|EDM51354.1| hypothetical protein EUBVEN_01262 [Eubacterium ventriosum ATCC 27560] Length = 441 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P IA G+ NVGKSS+IN + + SN G T+ +++K N Sbjct: 174 EDDRPRIAIVGKPNVGKSSIINKITGESRV-IVSNIAGTTRDAI------DTDVKWNGKD 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ V ++ID GV + D + Sbjct: 227 YVFIDTAGLRRKSKVKEEIEKYS--IIRTVTAVERADVVIIVIDAVEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + I + K D + E K + ++ P + E++ S+ + + L Sbjct: 285 HENGKGIIIAVNKWDAIEKNDKTVYEYTNKVRDILSFMP--YAEIMFISAKTGQRLPKLF 342 Query: 204 KAI 206 I Sbjct: 343 DMI 345 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 67/178 (37%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L +K ++ + PG T+ D+ + K ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGKK-ISIVKDTPGVTRDRIHADI-DWLDHK-----FTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P N + + T + + D + G+ D V L + Sbjct: 57 DTGGI----EPDSNDIILSQMREQAQIAIDTADVIIFMTDVKQGLVDSDAKVADMLRRSH 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D + + Y + +P S+ +R G+ + ++ Sbjct: 113 KPVILVVNKVDNFNK--------MMADVYEFYNLGIGDPVPISASQRSGLGDMLDKVV 162 >gi|188587902|ref|YP_001920548.1| GTP-binding protein EngA [Clostridium botulinum E3 str. Alaska E43] gi|238689667|sp|B2V3Z1|DER_CLOBA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|188498183|gb|ACD51319.1| ribosome-associated GTPase EngA [Clostridium botulinum E3 str. Alaska E43] Length = 438 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 13/181 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IA G+ NVGKSSLIN L+ + L S+ G T+ S L+ Sbjct: 173 DDEYIRIAMIGKPNVGKSSLINKLLGEERL-IVSDVAGTTRDAI------DSYLETEQGK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+ ++ + +I Y + L+ID + GV + D+ + + Sbjct: 226 FILIDTAGLRRKSKVKEEIERY-SVIRTY-ASIEKADVCILMIDAQDGVTEQDEKIIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 + + +++ K D + +T+EK K ++ P E + S++ + + Sbjct: 284 HELNKAIMVLVNKWDLVEKDD--KTMEKFKKDLQGSLKFMPYAEYLFISALTGQRTHKIL 341 Query: 204 K 204 + Sbjct: 342 E 342 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 20/184 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K ++ + PG T+ + + + Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRISIVQDTPGVTRDRVY------AEAEWLNYNFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P + + + T + ++D + G+ DQ+V + L K Sbjct: 55 MIDTGGI----EPTNDDIIMKQMRRQANIAIETADVIVFIVDGKEGLTAADQEVANMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID L Y + I S+ + G+ + ++ Sbjct: 111 SKKPVVLVVNKIDSLKYEE---------NSWEFYNLGIGDPITISASQALGLGDMLDKVV 161 Query: 208 ETIN 211 E + Sbjct: 162 EHFD 165 >gi|33593199|ref|NP_880843.1| GTP-binding protein EngA [Bordetella pertussis Tohama I] gi|33597408|ref|NP_885051.1| GTP-binding protein EngA [Bordetella parapertussis 12822] gi|33602148|ref|NP_889708.1| GTP-binding protein EngA [Bordetella bronchiseptica RB50] gi|41017018|sp|Q7VWL4|DER_BORPE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|41017021|sp|Q7W6Q0|DER_BORPA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|41017022|sp|Q7WHN4|DER_BORBR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|33563574|emb|CAE42473.1| putative GTP-binding protein [Bordetella pertussis Tohama I] gi|33573835|emb|CAE38143.1| putative GTP-binding protein [Bordetella parapertussis] gi|33576586|emb|CAE33664.1| putative GTP-binding protein [Bordetella bronchiseptica RB50] gi|332382610|gb|AEE67457.1| GTP-binding protein EngA [Bordetella pertussis CS] Length = 451 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 75/180 (41%), Gaps = 11/180 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 ++A GR NVGKS+LIN L+ + + + PG T+ + + + Sbjct: 183 DHRIKLAIVGRPNVGKSTLINTLLGEERV-IAFDMPGTTRDAIEI------DFERDGRKY 235 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ + +++ L V L+ID + V + D + F+ Sbjct: 236 TLIDTAGLRKRGKVFEAIEKFS--VIKTLQAIEASNVVLLMIDAQAEVSEQDAHIAGFVL 293 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + + K D L + + + +R + S++K +G++ L K++ Sbjct: 294 ETGRAVVVAINKWDGLDSDQRERIEREFQRKLR--FLGFARMHTISALKGQGVKPLLKSV 351 Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 57/174 (32%), Gaps = 21/174 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L R A ++ G T+ + + + ++ Sbjct: 5 PVVALVGRPNVGKSTLFNRLT-RSRAALVADFSGLTRD------RHYGEGRVGDTPFLVI 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + + V L+D R GV D ++ L K Sbjct: 58 DTGGFEPVAKDG----ILAEMARQTRQAIAEADVVVFLVDARAGVNAHDHEIARLLRKSG 113 Query: 150 -VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + K E + + E P S+ GI L Sbjct: 114 QQRVLLAVNKA---------EGMGVGNATGDFHELGLGEPHPISAAHGDGIVDL 158 >gi|322827249|gb|EFZ31514.1| hypothetical protein TCSYLVIO_2176 [Trypanosoma cruzi] Length = 478 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 43/209 (20%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PE+AF GR++ GKSSLIN ++N +A + G T +NF+ N + L Sbjct: 261 VPEVAFVGRTSSGKSSLINAILN-ALIAPYGHLQGTTSSVNFY---------NVANKVML 310 Query: 89 VDMPGYGYAR---APKKNVDSWGGLIVRYLSERST------------------------- 120 VD PGYGY P + ++ ++ Y+ + Sbjct: 311 VDCPGYGYYNPMETPALDAENAVAVMRAYIKTCAQHSNEKKRNSEGTKTNRDVGHRASYP 370 Query: 121 ---LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 ++ V++ + R GV++ D + +L+ AV + +VLTK D + T+ Sbjct: 371 KRPIKRVFVCVPSR-GVQKADTEYLDYLESLAVPFSVVLTKTDAAPIRFLARLADHTRCQ 429 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +Y E++ TSS++ GI+ ++ I Sbjct: 430 LVHYKHC-KELMLTSSLRLAGIDKVQNLI 457 >gi|253682586|ref|ZP_04863383.1| ribosome-associated GTPase EngA [Clostridium botulinum D str. 1873] gi|253562298|gb|EES91750.1| ribosome-associated GTPase EngA [Clostridium botulinum D str. 1873] Length = 438 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 13/174 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSLIN ++ + SN PG T+ S ++ AL+D Sbjct: 179 IAMVGRPNVGKSSLINRILGEEK-HIVSNIPGTTRDSV------DSYIEREEGKFALIDT 231 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ V+ + VR ++ L++D G+ + D+ + + + + Sbjct: 232 AGLRRKSKIKEQVERYSA--VRTIASIENADVCILMLDAEQGIAEQDEKIIGYAHELNKA 289 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 +++ K D + +T++ K +R + P + S+ + + + Sbjct: 290 IIVIVNKWDLIEKDD--KTMKNFKDKLRYELSFLPYASFLFISAKTGQRVNKVL 341 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 20/182 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + + +N Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVDDMPGVTRDRIYAQAEWLNN------KFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + V ++D + G+ D++V L K Sbjct: 55 IIDTGGI----EPESEDVIVAQMRRQAQMAIEMADVVLFIVDGKQGLADADREVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 S + + KID + L+ Y N P + S+ + G+ L ++ Sbjct: 111 ANKSIVLAVNKID-------RRQLDDNIYEFYNLGLGDP--MAISASQGLGLGDLLDEVV 161 Query: 208 ET 209 + Sbjct: 162 DK 163 >gi|71421337|ref|XP_811776.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70876479|gb|EAN89925.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 478 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 43/209 (20%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PE+AF GR++ GKSSLIN ++N +A + G T +NF+ N + L Sbjct: 261 VPEVAFVGRTSSGKSSLINAILN-ALIAPYGHLQGTTSSVNFY---------NVANKVML 310 Query: 89 VDMPGYGYAR---APKKNVDSWGGLIVRYLSERST------------------------- 120 VD PGYGY P + ++ ++ Y+ + Sbjct: 311 VDCPGYGYYNPMETPALDAENAVAVMRAYIKTCAQHSTEKKRNSEGTKTNGDVGHRASYS 370 Query: 121 ---LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 ++ V++ + R GV++ D + +L+ AV + +VLTK D + T+ Sbjct: 371 KRPIKRVFVCVPSR-GVQKADTEYLDYLESLAVPFSVVLTKTDAAPIRFLARLADHTRCQ 429 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +Y E++ TSS++ GI+ ++ I Sbjct: 430 LVHYKHC-KELMLTSSLRLAGIDKVQNLI 457 >gi|71407171|ref|XP_806072.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70869706|gb|EAN84221.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 478 Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 43/209 (20%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PE+AF GR++ GKSSLIN ++N +A + G T +NF+ N + L Sbjct: 261 VPEVAFVGRTSSGKSSLINAILN-ALIAPYGHLQGTTSSVNFY---------NVANKVML 310 Query: 89 VDMPGYGYAR---APKKNVDSWGGLIVRYLSERST------------------------- 120 VD PGYGY P + ++ ++ Y+ + Sbjct: 311 VDCPGYGYYNPMETPALDAENAVAVMRAYIKTCAQHSTEKKRNSEGTKTNRDVGHRASYP 370 Query: 121 ---LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL 177 ++ V++ + R GV++ D + +L+ AV + +VLTK D + T+ Sbjct: 371 KRPIKRVFVCVPSR-GVQKADTEYLDYLESLAVPFSVVLTKTDAAPIRFLARLADHTRCQ 429 Query: 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + +Y E++ TSS++ GI+ ++ I Sbjct: 430 LVHYKHC-KELMLTSSLRLAGIDKVQNLI 457 >gi|238878445|gb|EEQ42083.1| conserved hypothetical protein [Candida albicans WO-1] Length = 363 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 49/218 (22%) Query: 29 PPEIAFSGRSNVGKSSLIN-------ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 PE+ F G +NVGKSSLIN + LA S G T+ +N F N Sbjct: 158 LPEVLFMGHTNVGKSSLINGLLVKNKSITGPTQLAYVSARAGFTKTINCF---------N 208 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + ++D PGYG K+ G ++V Y+S R L+ VY+LID G ++ D + Sbjct: 209 FSKKLRIIDSPGYGEYGDLKQ-----GKVVVDYISRRHQLKKVYVLIDSVEGFREEDSYI 263 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQET------------------LEKTKYLIRN--- 180 F+ L + V + I+ TK+D + + +E LI + Sbjct: 264 FNLLIDEGVPFDIIFTKVDNVVSKYIPKNAFEANNCYDLIQTCNDRVVEHYGKLITSSGL 323 Query: 181 YPTAHPEVIPTSSV-------KRKGIEVLRKAILETIN 211 A S+ K G+ ++ IL++ N Sbjct: 324 QDIAMTPTFLFSNANTNKFLPKPAGMNEIQSNILDSCN 361 >gi|119964121|ref|YP_947439.1| GTP-binding protein EngA [Arthrobacter aurescens TC1] gi|254783134|sp|A1R5C7|DER_ARTAT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|119950980|gb|ABM09891.1| putative GTP-binding protein Era [Arthrobacter aurescens TC1] Length = 491 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 21/186 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +A GR NVGKS+L+N ++ R+ A + PG T+ + + N Sbjct: 49 PLKLDPVLAIIGRPNVGKSTLVNRILGRRE-AVVEDTPGVTRDRVMYSAR------WNGR 101 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G+ + + + L+ V ++D G D+ V Sbjct: 102 NFTLVDTGGWEHDAKGIHARVAEQAEMAVELA-----DAVLFVVDSAVGATATDEGVMKM 156 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K +V K+D + TL + E P S++ +G+ L Sbjct: 157 LRKSKKPVIMVANKVDDFAQEADSATL---------WGLGFGEPYPVSALHGRGVADLLD 207 Query: 205 AILETI 210 +++T+ Sbjct: 208 HVMDTL 213 Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 63/176 (35%), Gaps = 11/176 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 GP IA GR NVGKSSL+N L + + G T+ +F L + Sbjct: 226 GGPRRIALIGRPNVGKSSLLNKLAGSERVV-VDPLAGTTRDP----VDEFIELGD--RTW 278 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G + + D + L + E++ + V L +D + + D + Sbjct: 279 RFVDTAGIRRRQHMAQGADFYASLRTQAALEKAEVAVVLLAVD--EVLSEQDVRILQLAI 336 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + K D L + LE+ + P V S+ + L Sbjct: 337 ESGRALVLAFNKWDLLDD-ERRRYLEREIEQDLAHVEWAPRV-NISAKTGWHKDRL 390 >gi|262375525|ref|ZP_06068758.1| GTP-binding protein Era [Acinetobacter lwoffii SH145] gi|262309779|gb|EEY90909.1| GTP-binding protein Era [Acinetobacter lwoffii SH145] Length = 342 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHILGQK-LSITSRKPQTTRHKIVGIDS------REKSQAVFVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V ++D + D V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVVDAQ-KWTPNDDLVLEKLKNAEM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D L + + + N+ E++P S+++ +E LR I + + Sbjct: 149 PVILVINKLDTFENKNEALPLIREREKLMNFA----EIVPVSALRGANLEHLRDTIAKYL 204 >gi|331269697|ref|YP_004396189.1| small GTP-binding protein [Clostridium botulinum BKT015925] gi|329126247|gb|AEB76192.1| small GTP-binding protein [Clostridium botulinum BKT015925] Length = 438 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 13/180 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + IA GR NVGKSSLIN ++ + SN PG T+ S ++ Sbjct: 173 ENEYIRIAMVGRPNVGKSSLINRILGEEK-HIVSNIPGTTRDSV------DSYIEREEGK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 AL+D G K+ V+ + VR ++ L++D G+ + D+ + + Sbjct: 226 FALIDTAGLRRKSKIKEQVERYSA--VRTIASIENADVCILMLDAEQGIAEQDEKIIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 + + +++ K D + +T++ K +R + P + S+ + + + Sbjct: 284 HELNKAIMVIVNKWDLIEKDD--KTMKNFKDKLRYELSFLPYASFLFISAKTGQRVNKVL 341 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 20/182 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + + +N Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVDDMPGVTRDRIYAQAEWLNN------KFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + V ++D + G+ D++V L K Sbjct: 55 IIDTGGI----EPESEDVIVAQMRRQAQMAIEMADVVLFIVDGKQGLADADREVAQMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 S + + KID + L+ Y N P + SS + G+ L ++ Sbjct: 111 ANKSIVLAVNKID-------RHQLDDNIYEFYNLGLGDP--MAISSSQGLGLGDLLDEVV 161 Query: 208 ET 209 + Sbjct: 162 DK 163 >gi|242278504|ref|YP_002990633.1| GTP-binding protein EngA [Desulfovibrio salexigens DSM 2638] gi|259645870|sp|C6C0G0|DER_DESAD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|242121398|gb|ACS79094.1| small GTP-binding protein [Desulfovibrio salexigens DSM 2638] Length = 450 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 17/180 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L+ +K A T + PG T+ + AL Sbjct: 2 LPTIALIGRPNVGKSTLFNRLLRKKR-AITHDMPGITRDRIYAEGNYNGVH------YAL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + G + + + + L++D R G+ Q+D+ V +++ + Sbjct: 55 IDTGGLVMESDNNSE-EFQGDIFEQAREAIEEAQALILVVDGRTGITQLDEQVAAYIRQS 113 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ K+D + + T ++ E++ S+ + LR+ + + Sbjct: 114 NKPILLLVNKVD---GSELEAT------ATADFHALGFEMMAVSAEHGFNLLELREKVAD 164 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 11/169 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR N GKSS++N L + + S+ G T+ ++ VD Sbjct: 184 KIAMLGRPNAGKSSMVNALTGEERV-IVSDVAGTTRDSV------DVTFESGGKIYTFVD 236 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + +VR L + +++D G+ + D+ + +L ++AV Sbjct: 237 TAGVRRRTNITDTIERFS--VVRALRSSTKADITVMVVDALAGITKQDKRLLEYLLREAV 294 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + I + KID +S + E + +R H V+ TS + + G+ Sbjct: 295 PFIIAVNKIDLVSKSERNLLREGFERALRM--AHHVPVVYTSCISKSGL 341 >gi|68486091|ref|XP_713062.1| hypothetical protein CaO19.8756 [Candida albicans SC5314] gi|68486160|ref|XP_713030.1| hypothetical protein CaO19.1163 [Candida albicans SC5314] gi|46434496|gb|EAK93904.1| hypothetical protein CaO19.1163 [Candida albicans SC5314] gi|46434535|gb|EAK93942.1| hypothetical protein CaO19.8756 [Candida albicans SC5314] Length = 363 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 49/218 (22%) Query: 29 PPEIAFSGRSNVGKSSLIN-------ILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 PE+ F G +NVGKSSLIN + LA S G T+ +N F N Sbjct: 158 LPEVLFMGHTNVGKSSLINGLLVKNKSITGPTQLAYVSARAGFTKTINCF---------N 208 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + ++D PGYG K+ G ++V Y+S R L+ VY+LID G ++ D + Sbjct: 209 FSKKLRIIDSPGYGEYGDLKQ-----GKVVVDYISRRHQLKKVYVLIDSVEGFREEDSYI 263 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQET------------------LEKTKYLIRN--- 180 F+ L + V + I+ TK+D + + +E LI + Sbjct: 264 FNLLIDEGVPFDIIFTKVDNVVSKYIPKNAFEANNCYDLIQTCNDRVVEHYGKLITSSGL 323 Query: 181 YPTAHPEVIPTSSV-------KRKGIEVLRKAILETIN 211 A S+ K G+ ++ IL++ N Sbjct: 324 QDIAMTPTFLFSNANTNKFLPKPAGMNEIQSNILDSCN 361 >gi|90410877|ref|ZP_01218891.1| GTP-binding protein EngA [Photobacterium profundum 3TCK] gi|90328090|gb|EAS44401.1| GTP-binding protein EngA [Photobacterium profundum 3TCK] Length = 493 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 201 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQE 253 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +++ L V L+ID R + D + F+ Sbjct: 254 YVLIDTAGVRRRKNMNQAVEKFS--VIQTLKAVEDANVVLLIIDARENISDQDLSLLGFV 311 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + + + + S++ G+ L + Sbjct: 312 LNSGRSLVLAVNKWDGLDNEVKERVKSELDRRLG--FIDFARIHFISALHGTGVGHLYDS 369 Query: 206 ILET 209 ++E Sbjct: 370 VIEA 373 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAELEEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIEEADVVLFLVDGRAGLTVSDEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 +V+ KID + Sbjct: 110 EKPTFLVVNKIDGID 124 >gi|254521460|ref|ZP_05133515.1| GTP-binding protein [Stenotrophomonas sp. SKA14] gi|219719051|gb|EED37576.1| GTP-binding protein [Stenotrophomonas sp. SKA14] Length = 465 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 76/182 (41%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCRLDEDNH-----FLV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ G + + + + ++D R G +D ++ ++L K Sbjct: 56 VDTGGI-----AEEEEGLAGATTRQARAAAAEADLILFVVDAREGTSAMDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +++ KID + + + E++ S+ R+G++ L +++ Sbjct: 111 SRPTLLLINKIDGTDEDSVRSEFARY---------GFGEMLTVSAAHRQGLDDLLDEVIQ 161 Query: 209 TI 210 + Sbjct: 162 RL 163 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N ++ + + S+ PG T+ +L+ + Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERM-IASDVPGTTRDSI------AVDLERDGRE 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ + + L++D GV D V + Sbjct: 228 YRLIDTAGLRRRSRVDEVVEKFS--VVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAV 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D L+ ++ +T ++ E + S+ G+ L +A Sbjct: 286 LDAGRALVIAINKWDGLTEYQREQA--ETLLSLKLGFVPWAESVRISAKHGSGLRELFRA 343 Query: 206 I 206 + Sbjct: 344 V 344 >gi|114332129|ref|YP_748351.1| GTP-binding protein EngA [Nitrosomonas eutropha C91] gi|122313190|sp|Q0AE46|DER_NITEC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|114309143|gb|ABI60386.1| small GTP-binding protein [Nitrosomonas eutropha C91] Length = 468 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 12/186 (6%) Query: 18 VPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 +I P + P IA +GR NVGKS+LIN L+ + + + PG T+ + Sbjct: 166 AEDIEAEPGQEKHPVIAIAGRPNVGKSTLINTLLGEERM-IAFDQPGTTRDSIYI----- 219 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + + L+D G + + V+ + +V+ L V L++D + G+ + Sbjct: 220 -DFEYGQRRYTLIDTAGLRRSGKVWETVEKFS--VVKTLQSIEAANVVVLVLDAQSGISE 276 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + F+ + + I + K D + T + + + A+ I S++ Sbjct: 277 QDAHIAGFILETGRALVIAINKWDGMDDYQRDTTKREFERKLAFLNFANLHYI--SALYG 334 Query: 197 KGIEVL 202 G++ L Sbjct: 335 NGVKAL 340 Score = 97.5 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N L ++ A ++ PG T+ + + + + L +V Sbjct: 3 PTLVLVGRPNVGKSTLFNRLTRSRD-AIVADIPGLTRD------RHYGHGRLGLKPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + L V ++D R G+ D+ + L K Sbjct: 56 DTGGFEPVVKSG----ILHAMARQTLQAVDEADVVLFIVDGRQGLASQDKIIADQLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K E + + + + S++ + + L LE Sbjct: 112 RKIILVVNKA---------EGMPYSTAAVEFHELGLGTPCVVSALHGEHLGELIDFALE 161 >gi|332879048|ref|ZP_08446757.1| ribosome biogenesis GTPase Der [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682997|gb|EGJ55885.1| ribosome biogenesis GTPase Der [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 437 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 69/176 (39%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P A GR N GKSSLIN + + ++ G T+ + F Sbjct: 172 DENIPRFAVVGRPNAGKSSLINAFIGEERN-IVTDIAGTTRDSIYTRYTKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEYYSVM--RSIRAIENSDVCILMLDAERGIEAQDLNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 + S +V+ K D + + + +Y IR+ P +I S++ ++ I Sbjct: 283 QRNNKSLVVVVNKWDLV-ENKTTVVMNEYEYAIRHRMAPFDDFPIIFASALTKQRI 337 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 60/176 (34%), Gaps = 20/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + +++D Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QTRHAIVSDEAGTTRDRQY------GKSEWTGREFSVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ + + + + L+D R+G+ +D+ V + L + Sbjct: 58 GGWVVNSDDIFEEEIRKQVTLAT----EEADVILFLVDVRNGLTDLDEAVANILRRTKKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D T E Y + S+ G L I+ Sbjct: 114 VILVANKAD---------TNEWIYSAAEFYALGLGDPYCISAATGSGTGELLDLIV 160 >gi|325954552|ref|YP_004238212.1| GTP-binding protein engA [Weeksella virosa DSM 16922] gi|323437170|gb|ADX67634.1| GTP-binding protein engA [Weeksella virosa DSM 16922] Length = 435 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 13/177 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 G P IA GR N GKS+LIN L+ + ++ G T+ + F Sbjct: 173 EGLPRIAIVGRPNAGKSTLINALLGEERN-IVTDVAGTTRDSIETLYNKFG------HKF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G ++++ + + R + L++D G++ D ++ + Sbjct: 226 VLVDTAGMRKKGKVAEDLEFYSVM--RAIRTIEECDVCVLVVDGSRGLEAQDLNILYLAE 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEV 201 + I++ K D + T T+ + +I+ P ++ S++ ++ I Sbjct: 284 RNRKGVVILVNKWDLVEKQT--NTMRDFEKMIKTKIAPFTDVPILFISALNKQRIHK 338 Score = 87.5 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 69/180 (38%), Gaps = 24/180 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ N LV +K A + G T+ + + N ++D Sbjct: 5 VAIVGRPNVGKSTFFNRLV-QKRQAIVDDVSGVTRD------RHYGKSDWNGVEFTVIDT 57 Query: 92 PGYGYARAP--KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 GY ++ + L V + ++D + G+ +D++V L K Sbjct: 58 GGYVVGSEDTFEEEIRKQVELAVD------EANVILFMVDNQVGLTDMDKEVSHLLRKAK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + L+ + Y ++ +++ G L ++++ Sbjct: 112 KKTFLVVNKVD------TNKNLDDSYEF---YTLGFDKIFTIAAISGSGTGDLLDEVVDS 162 >gi|51246791|ref|YP_066675.1| GTP-binding protein (EngA) [Desulfotalea psychrophila LSv54] gi|50877828|emb|CAG37668.1| Probable GTP-binding protein (EngA) [Desulfotalea psychrophila LSv54] Length = 446 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 13/191 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + G ++AF GR NVGKSS+IN ++ + S G T+ + Sbjct: 170 ASTMSQDLPDGTVKVAFFGRPNVGKSSMINRILGEDRM-IVSEISGTTRDSV------DT 222 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 L + + L+D G + ++ + I++ L +LID G+ + Sbjct: 223 LLTHGNYSYLLIDTAGIRRKGKTTEKLEKFS--ILKSLGALERCDVAVILIDADEGITEQ 280 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D V + + I++ K D L E L + + ++ S++ Sbjct: 281 DTKVIGYALDQGRGLIILVNKWDLLEGDKKRQDEVLAEVGRQLP--FIGFAPLLTVSALS 338 Query: 196 RKGIEVLRKAI 206 GI+ L I Sbjct: 339 GFGIKRLFPVI 349 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 70/185 (37%), Gaps = 19/185 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKS+L N + +N A PG T+ + + N A Sbjct: 3 NSSCPIVALVGRPNVGKSTLFNRITKSRN-ALVDPTPGVTRDRQY------ERVVWNNRA 55 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M LVD G P+ + + + L+ V L+D R G+ D +V L Sbjct: 56 MILVDTGGI--DDNPEDVLVPH--IRDQALAAIEEADIVLFLMDGREGLTPADYEVVDIL 111 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + V+ KID ++ + L Y + S+ G L A Sbjct: 112 RRAKKPVYHVINKID--------GPEKELELLCPFYELGVETLWSLSADHTFGFNTLMDA 163 Query: 206 ILETI 210 + ETI Sbjct: 164 LSETI 168 >gi|308198154|ref|XP_001386880.2| predicted protein [Scheffersomyces stipitis CBS 6054] gi|149388890|gb|EAZ62857.2| predicted protein [Pichia stipitis CBS 6054] Length = 374 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 17/135 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILV---NRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 PE+ G +NVGKSSL+N L+ + A S G T+ +N + N Sbjct: 160 LPEVLLLGHTNVGKSSLLNNLIVNSDASEYAYVSQRAGYTKTINCY---------NIGRK 210 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + ++D PGYG K+ G +++ Y+S+R LR V++LID G + D + L Sbjct: 211 LRVIDSPGYGQFGEAKQ-----GKVVLDYISKRHLLRRVFILIDSVEGFRVEDMQMMDHL 265 Query: 146 DKKAVSYQIVLTKID 160 + V +++V TK D Sbjct: 266 ISEGVPFEVVFTKTD 280 >gi|237807624|ref|YP_002892064.1| GTP-binding protein Era [Tolumonas auensis DSM 9187] gi|237499885|gb|ACQ92478.1| GTP-binding protein Era [Tolumonas auensis DSM 9187] Length = 300 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 16/173 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H + VD Sbjct: 11 VAIVGRPNVGKSTLLNKLLGQK-VSITSRKPQTTRHRILGIDT------QGAYQTIFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG ++ + S + V ++D H D+ V + L Sbjct: 64 PGLHI----EEKRAINRLMNRAATSSLGDVEMVVFVVDGTH-WTDDDEMVLNKLRHMHCP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + K+D + L + L + E++P S+ K +E +R+ Sbjct: 119 VVLAVNKVDVIKDKEI--LLPHLQMLAQK--GNFAEILPISAEKGTNVEKIRE 167 >gi|21231435|ref|NP_637352.1| GTP-binding protein EngA [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768511|ref|YP_243273.1| GTP-binding protein EngA [Xanthomonas campestris pv. campestris str. 8004] gi|188991681|ref|YP_001903691.1| GTP-binding protein EngA [Xanthomonas campestris pv. campestris str. B100] gi|26006714|sp|Q8P979|DER_XANCP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|81305517|sp|Q4UUM0|DER_XANC8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|229807529|sp|B0RT56|DER_XANCB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|21113105|gb|AAM41276.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573843|gb|AAY49253.1| GTP-binding protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733441|emb|CAP51642.1| GTP-binding protein, probable [Xanthomonas campestris pv. campestris] Length = 465 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N L+ + + S PG T+ +L+ + Sbjct: 175 DPARVRIAFVGRPNVGKSTLVNRLLGEERM-IASEVPGTTRDSI------AVDLERDGRQ 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + + L + L++D GV D + + Sbjct: 228 YRLIDTAGLRRRGKVEEAVEKFSAF--KTLQAIEQCQVAVLMLDATEGVTDQDATILGAI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D S + + + E + S++ G+ L +A Sbjct: 286 LDAGRALVVAINKWDGQSDYQRAQAEDLLSRKLG--FVNWAEAVRISALHGSGMRELFQA 343 Query: 206 I 206 I Sbjct: 344 I 344 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 20/178 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCR-----LDEQQPFIV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ + R + + L V ++D R G +D ++ ++L K Sbjct: 56 VDTGGI---AGDEEGLAGATARQARAAAGEADL--VLFVVDGREGASSLDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 A +V+ KID + + + +V+ S+ R+GI+ L + + Sbjct: 111 ARPTVLVINKIDGTDEESVRSEFSRY---------GFSDVVALSAAHRQGIDDLLEEV 159 >gi|116051824|ref|YP_789333.1| GTP-binding protein EngA [Pseudomonas aeruginosa UCBPP-PA14] gi|122260971|sp|Q02RV3|DER_PSEAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|115587045|gb|ABJ13060.1| putative GTP-binding protein EngA [Pseudomonas aeruginosa UCBPP-PA14] Length = 493 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 76/184 (41%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + G T+ + + N Sbjct: 194 EKDGIKIAIIGRPNVGKSTLVNRMLGEERV-IVYDQAGTTRDSIYI------PFERNEEM 246 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ L V ++D R GV + D ++ F+ Sbjct: 247 YTLIDTAGVRRRGKIFEAVEKFS--VVKTLQAIQDANVVIFVMDAREGVVEHDLNLLGFV 304 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I L K D A+ KT+ R ++ S++ G+ L K+ Sbjct: 305 LETGRALVIALNKWD--GMEAAERDYVKTELERRLLFVDFADIHFISALHGTGVGHLYKS 362 Query: 206 ILET 209 + E+ Sbjct: 363 VQES 366 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 21/177 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + A + G T+ + + + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLT-KSRDAIVAEYAGLTRDRQY------GEARWQGRTYIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ +D+ + + L V L+D R G+ DQ + L K+ Sbjct: 55 IDTGGI---SGDEEGIDA--KMAEQSLQAIEEADAVLFLVDSRAGMTAADQMIAEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ K+D + P A+ P + +P ++ +GI + + Sbjct: 110 NKRSFLIANKVDTIDPDLARAEFS---------PLGLGDALPIAAAHGRGINHMLQE 157 >gi|325681451|ref|ZP_08160977.1| ribosome biogenesis GTPase Der [Ruminococcus albus 8] gi|324106941|gb|EGC01231.1| ribosome biogenesis GTPase Der [Ruminococcus albus 8] Length = 443 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 78/195 (40%), Gaps = 14/195 (7%) Query: 15 LRGVPEIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 L+ +PEI ++A G+ NVGKSSLIN + + + S+ G T+ Sbjct: 162 LKYLPEISAEEDDDEAVKVAVIGKPNVGKSSLINRICGEERV-IVSDIAGTTRD------ 214 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++++N +D G + V+ + L +R+ ++ID G Sbjct: 215 ATDTDIENEFGKFVFIDTAGIRRKSKVLETVEKYSVLRAYMAVDRAD--VAVIVIDATVG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPT 191 + D V + +K + + + K D L +T+ + + + N ++ + Sbjct: 273 FTEQDSKVAGYAHEKGKACVVAVNKWDALEKDG--KTMNEFRKKLENDFSFMSYVPFVFV 330 Query: 192 SSVKRKGIEVLRKAI 206 S+ ++ L + I Sbjct: 331 SAKTGLRVDKLFEMI 345 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L+ ++ L+ + PG T+ + + L Sbjct: 3 LPVVAVVGRPNVGKSTLFNKLIGQR-LSIVEDTPGVTRDRIY------GKCEWLGREFML 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G P+ + + + ++ + L+ D + GV D +V L K Sbjct: 56 VDTGGI----EPESDDIILSQMRRQSELAITSANVIILVTDIKSGVTSTDMEVAQMLMKS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D + L Y E P SSV G + +L+ Sbjct: 112 GKPVVLCVNKVDNVGEPPM--------ELYEFYNLGLGEPFPVSSVHGHGTGDMLDEVLK 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|323526574|ref|YP_004228727.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001] gi|323383576|gb|ADX55667.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1001] Length = 445 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 77/183 (42%), Gaps = 11/183 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A +IA GR NVGKS+LIN LV + + + PG T+ + + + Sbjct: 177 AHGIKIAIVGRPNVGKSTLINALVGEERV-IAFDMPGTTRDSIY------VDFERQGKPY 229 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ + +V+ L S V LL+D R + D + F+ Sbjct: 230 TLIDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVV 287 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ + + + K D L + T + ++ A + S+ ++ GI L +++ Sbjct: 288 EQGRALVVGVNKWDGLDSHVRERTKADLERKLKFLDFA--KFHFISAAEKTGIGPLMRSV 345 Query: 207 LET 209 + Sbjct: 346 DDA 348 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 23/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRTGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKVIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K E ++ + Y + S+ G+ + I E Sbjct: 112 RPIFLVVNKA---------EGMKYSAVAADFYELGLGDPRAISAAHGDGVTEM---INEA 159 Query: 210 IN 211 + Sbjct: 160 LG 161 >gi|157374575|ref|YP_001473175.1| GTP-binding protein EngA [Shewanella sediminis HAW-EB3] gi|189037163|sp|A8FT74|DER_SHESH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157316949|gb|ABV36047.1| small GTP-binding protein [Shewanella sediminis HAW-EB3] Length = 488 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 73/186 (39%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + ++PG T+ + ++ + Sbjct: 196 QDLPIKMAIIGKPNVGKSTLTNRILGEERVV-VYDSPGTTRDSIYI------PMERDGRE 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + V+ + +++ L V L+ID R G+ + D + F Sbjct: 249 YVMIDTAGVRRRSKVHETVEKFS--VIKTLKAVEDCNVVLLIIDAREGIAEQDLGLLGFA 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 307 LNAGRALVIAVNKWDGIDQDIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLFES 364 Query: 206 ILETIN 211 + E + Sbjct: 365 VQEAYD 370 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAFLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V L D R G+ DQ + L ++ Sbjct: 55 VDTGGI---DGTEEGIETH--MAEQSLAAIEEADVVLFLTDARAGLTAADQAICEHLRRR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 EKTTFVVANKVDGID 124 >gi|326791376|ref|YP_004309197.1| ribosome-associated GTPase EngA [Clostridium lentocellum DSM 5427] gi|326542140|gb|ADZ83999.1| ribosome-associated GTPase EngA [Clostridium lentocellum DSM 5427] Length = 441 Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 13/178 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKSSL+N +V + + SN G T+ + + L+D Sbjct: 180 VAIIGKPNVGKSSLVNKIVGEERV-IVSNIAGTTRDSV------DTEVTIEGQEYVLIDT 232 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+N++ + I+R ++ V +LID G+ + D + + Sbjct: 233 AGIRRRSKIKENIEKYS--IIRTIAAIDRADVVLILIDAEEGITEQDTKIAGMAHEAGKG 290 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAIL 207 IV+ K D + +T+ I N + + S++ + I L I Sbjct: 291 CIIVVNKWDAIEKDD--KTMNAYLKKITNTLAYMQYAPCMFISALTGQRIPKLFDTIY 346 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 19/164 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K + + PG T+ + ++ N K ++ Sbjct: 4 PIVAVIGRPNVGKSTLFNRLTKSKT-SIVDDTPGVTRDRIYGEV-EWLNHK-----FTII 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + + + L+D + G+ D V + L K Sbjct: 57 DTGGI----EPDSTDIILSQMRRQAEAAIESADVIIFLVDVKTGMTDADTHVANMLRKSH 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 +V+ K+D + + +T + Y E IP SS Sbjct: 113 KPVVLVVNKVD--------DMVHQTMGMYEFYNLGLGEPIPISS 148 >gi|297544868|ref|YP_003677170.1| ribosome-associated GTPase EngA [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842643|gb|ADH61159.1| ribosome-associated GTPase EngA [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 439 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 78/196 (39%), Gaps = 19/196 (9%) Query: 21 IGLLPKAGP------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + LP+ G +IA GR NVGKSSL+N ++ + + S+ PG T+ Sbjct: 162 VKKLPQEGLEYSEETIKIAVIGRPNVGKSSLVNKILGEERV-IVSDIPGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + L+D G ++++ + L ERS + L+ID G Sbjct: 216 -DTPFSKDGKNYVLIDTAGIRRKSRISESIERYSVLRALTAIERSDI--CLLMIDAIEGP 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTS 192 + D + + + IV+ K D + T+ + +IR + ++ S Sbjct: 273 AEQDTKIAGYAFENGKGIIIVVNKWDAIKKN--NNTVNEYTKMIREKLSFISFAPILFIS 330 Query: 193 SVKRKGIEVLRKAILE 208 + + + + + + + Sbjct: 331 AKTGQRVHRVLQTVDK 346 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 60/182 (32%), Gaps = 25/182 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L N ++ K ++ + PG T+ N + LVD Sbjct: 6 VSIVGRPNVGKSTLFNKIMG-KRISIVEDKPGVTRDRIC------GNAEWLNKKFILVDT 58 Query: 92 PGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G K I + L+D + G+ D+++ L + Sbjct: 59 GGLDPDAEDIIFSKVRLQVEAAIEAS-------EVILFLVDAKEGLMPEDEEIADILRRA 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D + IP S+ GI L I++ Sbjct: 112 KKEIILVCNKVDNFKELPP--------TYYDFFSLGLGNPIPISASNGLGIGELLDEIVK 163 Query: 209 TI 210 + Sbjct: 164 KL 165 >gi|307729253|ref|YP_003906477.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003] gi|307583788|gb|ADN57186.1| ribosome-associated GTPase EngA [Burkholderia sp. CCGE1003] Length = 445 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + + + L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERV-IAFDMPGTTRDSIY------VDFERQGKPYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D L + T + ++ A + S+ ++ GI L +++ + Sbjct: 292 ALVVGVNKWDGLDSHVRERTKADLERKLKFLDFA--KFHFISAAEKTGIGPLMRSVDDA 348 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 23/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRTGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K E ++ + Y + S+ G+ + I E Sbjct: 112 RPIFLVVNKA---------EGMKYSAVAADFYELGLGDPRAISAAHGDGVTEM---INEA 159 Query: 210 IN 211 + Sbjct: 160 LG 161 >gi|257791089|ref|YP_003181695.1| small GTP-binding protein [Eggerthella lenta DSM 2243] gi|317488189|ref|ZP_07946760.1| ribosome-associated GTPase EngA [Eggerthella sp. 1_3_56FAA] gi|325830789|ref|ZP_08164173.1| ribosome biogenesis GTPase Der [Eggerthella sp. HGA1] gi|257474986|gb|ACV55306.1| small GTP-binding protein [Eggerthella lenta DSM 2243] gi|316912694|gb|EFV34232.1| ribosome-associated GTPase EngA [Eggerthella sp. 1_3_56FAA] gi|325487196|gb|EGC89639.1| ribosome biogenesis GTPase Der [Eggerthella sp. HGA1] Length = 438 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 14/188 (7%) Query: 23 LLPKAGPPE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 LP E +A GR N GKSSL N L + S+ G T+ ++ Sbjct: 168 DLPADADEEDGINVAIIGRPNAGKSSLTNKLTANDR-SIVSDVAGTTRDAI------DTH 220 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + ++ +VD G ++V+ +G VR + L+ID G+ D Sbjct: 221 IVHDGQRYTIVDTAGLRRKSQIDEDVEYYG--FVRAMRAIDRANVALLVIDSTLGLTDQD 278 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 Q V F ++ + IVL K D + A+ + + + R + VI S++ K Sbjct: 279 QRVAGFAAERGCAMVIVLNKWDLIEGPEAKAEIRE-RIADRLTFVGYAPVIAISALTGKK 337 Query: 199 IEVLRKAI 206 ++ + A+ Sbjct: 338 VDRIWDAV 345 Score = 94.8 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+ +N + + + A G T+ ++ N L Sbjct: 3 LPIVAVVGRPNVGKSTFVNRIA-QADEAIVHEMRGVTRDRSYHEAD------WNGVDFKL 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + G + + L+ + + L+D + GV D+ V L K Sbjct: 56 IDTGGIEMG----DDDAFQGSIRNQALAGANEADVILFLVDGKTGVNADDEAVARILRKT 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ K+D +P E E + + + P S++ G L ++ Sbjct: 112 SKPVFLVVNKLD--TPNRMDEVWEFYQLGLGDPW-------PVSAMHGHGTGDLLDEVVN 162 Query: 209 TI 210 + Sbjct: 163 EL 164 >gi|170694783|ref|ZP_02885934.1| small GTP-binding protein [Burkholderia graminis C4D1M] gi|170140414|gb|EDT08591.1| small GTP-binding protein [Burkholderia graminis C4D1M] Length = 445 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+LIN LV + + + PG T+ + + + L+D Sbjct: 181 KIAIVGRPNVGKSTLINALVGEERV-IAFDMPGTTRDSIY------VDFERQGKPYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D R + + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D L + T + ++ A + S+ ++ GI L +++ + Sbjct: 292 ALVVGVNKWDGLDSHVRERTKADLERKLKFLDFA--KFHFISAAEKTGIGPLMRSVDDA 348 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 23/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRTGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEESDIVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K E ++ + Y + S+ G+ + I E Sbjct: 112 RPIFLVVNKA---------EGMKYSTVAADFYELGLGDPRAISAAHGDGVTEM---INEA 159 Query: 210 IN 211 + Sbjct: 160 LG 161 >gi|146283357|ref|YP_001173510.1| GTP-binding protein EngA [Pseudomonas stutzeri A1501] gi|166225844|sp|A4VNW7|DER_PSEU5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145571562|gb|ABP80668.1| GTP-binding protein EngA [Pseudomonas stutzeri A1501] gi|327481749|gb|AEA85059.1| GTP-binding protein EngA [Pseudomonas stutzeri DSM 4166] Length = 499 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N ++ + + + G T+ + ++P + K L Sbjct: 200 EKEGIKIAIIGRPNVGKSTLVNRMLGEERV-IVYDQAGTTRD-SIYIPFERDEEKYTLID 257 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 A V G + K +V V+ L V ++D R GV + D ++ F+ Sbjct: 258 TAGVRRRGKIFEAVEKFSV-------VKTLQAIQDANVVIFVMDAREGVVEHDLNLLGFV 310 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + KT+ R + + ++ S+ G+ L Sbjct: 311 LETGRALVIALNKWDGMEQGEKDYV--KTELERRLFFVDYADIHFISAKHGTGVGHL 365 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 21/171 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + A + G T+ + K + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLT-KSRDAIVAEYAGLTRDRQY------GEAKWQGRTYIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ +D+ + + L V ++D R G+ DQ + L K+ Sbjct: 55 IDTGGI---SGDEEGIDA--KMAEQSLQAIEEADAVLFMVDSRAGLTAADQMIGEHLRKR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V K+D + P A+ P + +P ++ +GI Sbjct: 110 NKRCFLVANKVDSVDPDIARAEFS---------PLGLGDALPIAAAHGRGI 151 >gi|153843824|ref|ZP_01993596.1| GTP-binding protein EngA [Vibrio parahaemolyticus AQ3810] gi|149745287|gb|EDM56538.1| GTP-binding protein EngA [Vibrio parahaemolyticus AQ3810] Length = 286 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 67/177 (37%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 121 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGRE 173 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + V+ + +V+ L V L+ID R + D + F Sbjct: 174 YVIIDTAGVRRRGRINETVEKFS--VVKTLKAVEDANVVLLVIDARENISDQDLSLLGFA 231 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 S + + K D L + ++ + + S++ G+ L Sbjct: 232 LNAGRSIVLAVNKWDGLDNEVKENVKKELDRRLG--FVDFARIHFISALHGTGVGHL 286 Score = 42.8 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 9/80 (11%) Query: 125 YLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 L+D R G+ D+ + + L K +V+ KID + A + Sbjct: 2 LFLVDGRAGLTPADEAIAAHLRKIEKPAMLVVNKIDGIDADAACA---------DFWQLG 52 Query: 185 HPEVIPTSSVKRKGIEVLRK 204 ++ ++ +G+ L + Sbjct: 53 VDDMYQIAAAHGRGVTALLE 72 >gi|325268712|ref|ZP_08135341.1| ribosome-associated GTPase EngA [Prevotella multiformis DSM 16608] gi|324988956|gb|EGC20910.1| ribosome-associated GTPase EngA [Prevotella multiformis DSM 16608] Length = 437 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 67/176 (38%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P A GR N GKSS+IN + + G T+ + F Sbjct: 172 DQDIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRYNKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEFYSVM--RSIRSIENSDVCILMLDATRGIEAQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 + S +V+ K D + Q+ ++ + IR P +I S++ ++ I Sbjct: 283 QRNNKSLVVVVNKWDLVEDKN-QKVIDTFENAIRKRMAPFVDFPIIFASALTKQRI 337 Score = 95.2 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 11/129 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QTRHAIVSDTAGTTRDRQY------GKCQWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V L+D GV D+DV L + + Sbjct: 58 GG----WVVKSDDIFEDAIRKQVLVATEEADLVLFLVDTETGVTDWDEDVAMILRRTKLP 113 Query: 152 YQIVLTKID 160 +V K+D Sbjct: 114 VLLVANKVD 122 >gi|307700914|ref|ZP_07637939.1| ribosome-associated GTPase EngA [Mobiluncus mulieris FB024-16] gi|307613909|gb|EFN93153.1| ribosome-associated GTPase EngA [Mobiluncus mulieris FB024-16] Length = 524 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 21/185 (11%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKS+L+N ++ R+ +A + PG T+ + + N Sbjct: 85 RDSWPTVAIVGRPNVGKSTLVNRILGRR-VAVVLDEPGVTRDRVIY------DADWNGRD 137 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G+ + I ++D G D+ + L Sbjct: 138 FHLIDTGGWDVGVKGLDKAVATQAEI-----AIEMADVSLFVVDANVGATATDEAMMRLL 192 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K+D + E + E P S++ +G+ L Sbjct: 193 RASKKPVILVANKVD----SERAEA-----DASGLWNLGLGEPYPISALHGRGVGELLDV 243 Query: 206 ILETI 210 +L+ + Sbjct: 244 LLDAL 248 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 10/164 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +A GR NVGKSSL+N L + S+ PG T+ L+ + Sbjct: 259 PADSTPRVALVGRPNVGKSSLLNSLAG-SGRSVVSDTPGTTRDPV------DEVLELDGK 311 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G D + L + S + +L+D + + D V + Sbjct: 312 EWVFVDTAGIKRRIKQTVGADYYSVLRAQ--SAIESAEVALVLLDGGEPLSEQDVKVVNL 369 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 + + + +V K D + QE L++ + L + + P++ Sbjct: 370 VVESGRALVLVNNKWDLVDEYRQQE-LKREQELDLAHVSWAPKI 412 >gi|306818602|ref|ZP_07452325.1| ribosome-associated GTPase EngA [Mobiluncus mulieris ATCC 35239] gi|304648775|gb|EFM46077.1| ribosome-associated GTPase EngA [Mobiluncus mulieris ATCC 35239] Length = 526 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 21/185 (11%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKS+L+N ++ R+ +A + PG T+ + + N Sbjct: 87 RDSWPTVAIVGRPNVGKSTLVNRILGRR-VAVVLDEPGVTRDRVIY------DADWNGRD 139 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G+ + I ++D G D+ + L Sbjct: 140 FHLIDTGGWDVGVKGLDKAVATQAEI-----AIEMADVSLFVVDANVGATATDEAMMRLL 194 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K+D + E + E P S++ +G+ L Sbjct: 195 RASKKPVILVANKVD----SERAEA-----DASGLWNLGLGEPYPISALHGRGVGELLDV 245 Query: 206 ILETI 210 +L+ + Sbjct: 246 LLDAL 250 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 10/164 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +A GR NVGKSSL+N L + S+ PG T+ L+ + Sbjct: 261 PADSTPRVALVGRPNVGKSSLLNSLAG-SGRSVVSDTPGTTRDPV------DEVLELDGK 313 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G D + L + S + +L+D + + D V + Sbjct: 314 EWVFVDTAGIKRRIKQTVGADYYSVLRAQ--SAIESAEVALVLLDGGEPLSEQDVKVVNL 371 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 + + + +V K D + QE L++ + L + + P++ Sbjct: 372 VVESGRALVLVNNKWDLVDEYRQQE-LKREQELDLAHVSWAPKI 414 >gi|269978226|ref|ZP_06185176.1| ribosome-associated GTPase EngA [Mobiluncus mulieris 28-1] gi|269933735|gb|EEZ90319.1| ribosome-associated GTPase EngA [Mobiluncus mulieris 28-1] Length = 547 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 21/185 (11%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKS+L+N ++ R+ +A + PG T+ + + N Sbjct: 108 RDSWPTVAIVGRPNVGKSTLVNRILGRR-VAVVLDEPGVTRDRVIY------DADWNGRD 160 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G+ + I ++D G D+ + L Sbjct: 161 FHLIDTGGWDVGVKGLDKAVATQAEI-----AIEMADVSLFVVDANVGATATDEAMMRLL 215 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K+D + E + E P S++ +G+ L Sbjct: 216 RASKKPVILVANKVD----SERAEA-----DASGLWNLGLGEPYPISALHGRGVGELLDV 266 Query: 206 ILETI 210 +L+ + Sbjct: 267 LLDAL 271 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 10/164 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +A GR NVGKSSL+N L + S+ PG T+ L+ + Sbjct: 282 PADSTPRVALVGRPNVGKSSLLNSLAG-SGRSVVSDTPGTTRDPV------DEVLELDGK 334 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G D + L + S + +L+D + + D V + Sbjct: 335 EWVFVDTAGIKRRIKQTVGADYYSVLRAQ--SAIESAEVALVLLDGGEPLSEQDVKVVNL 392 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 + + + +V K D + QE L++ + L + + P++ Sbjct: 393 VVESGRALVLVNNKWDLVDEYRQQE-LKREQELDLAHVSWAPKI 435 >gi|227875339|ref|ZP_03993481.1| GTP-binding protein EngA [Mobiluncus mulieris ATCC 35243] gi|227844244|gb|EEJ54411.1| GTP-binding protein EngA [Mobiluncus mulieris ATCC 35243] Length = 517 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 21/185 (11%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKS+L+N ++ R+ +A + PG T+ + + N Sbjct: 78 RDSWPTVAIVGRPNVGKSTLVNRILGRR-VAVVLDEPGVTRDRVIY------DADWNGRD 130 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G+ + I ++D G D+ + L Sbjct: 131 FHLIDTGGWDVGVKGLDKAVATQAEI-----AIEMADVSLFVVDANVGATATDEAMMRLL 185 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V K+D + E + E P S++ +G+ L Sbjct: 186 RASKKPVILVANKVD----SERAEA-----DASGLWNLGLGEPYPISALHGRGVGELLDV 236 Query: 206 ILETI 210 +L+ + Sbjct: 237 LLDAL 241 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 10/164 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +A GR NVGKSSL+N L + S+ PG T+ L+ + Sbjct: 252 PADSTPRVALVGRPNVGKSSLLNSLAG-SGRSVVSDTPGTTRDPV------DEVLELDGK 304 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G D + L + S + +L+D + + D V + Sbjct: 305 EWVFVDTAGIKRRIKQTVGADYYSVLRAQ--SAIESAEVALVLLDGGEPLSEQDVKVVNL 362 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV 188 + + + +V K D + QE L++ + L + + P++ Sbjct: 363 VVESGRALVLVNNKWDLVDEYRQQE-LKREQELDLAHVSWAPKI 405 >gi|327312576|ref|YP_004328013.1| ribosome biogenesis GTPase Der [Prevotella denticola F0289] gi|326944058|gb|AEA19943.1| ribosome biogenesis GTPase Der [Prevotella denticola F0289] Length = 437 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 72/187 (38%), Gaps = 14/187 (7%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L+ P+ + P A GR N GKSS+IN + + G T+ + Sbjct: 163 LKDAPDESV--DQDIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRYT 219 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 F LVD G ++++ + + R + L++D G+ Sbjct: 220 KFG------FDFYLVDTAGIRRKNKVTEDLEFYSVM--RSIRSIENSDVCILMLDATRGI 271 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTS 192 + D ++F + + S +V+ K D + Q+ ++ + IR P +I S Sbjct: 272 EAQDMNIFQLIQRNNKSLVVVVNKWDLVEDKN-QKVIDTFENAIRKRMAPFVDFPIIFAS 330 Query: 193 SVKRKGI 199 ++ ++ I Sbjct: 331 ALTKQRI 337 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 63/179 (35%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QTRHAIVSDTAGTTRDRQY------GKCQWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V L+D GV D+DV L + + Sbjct: 58 GG----WVVKSDDIFEDAIRKQVLVATEEADLVLFLVDTETGVTDWDEDVAMILRRTKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y E I S+ G L +LE + Sbjct: 114 VLLVANKVD---------NSGEYYQAAEFYKLGLGEPICVSAATGGGTGDLLDILLEKL 163 >gi|78213545|ref|YP_382324.1| GTP-binding protein EngA [Synechococcus sp. CC9605] gi|123577697|sp|Q3AI13|DER_SYNSC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78198004|gb|ABB35769.1| Small GTP-binding protein domain [Synechococcus sp. CC9605] Length = 455 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 16/189 (8%) Query: 21 IGLLPKAG-------PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP P ++A GR NVGKSSL+N + + A S G T+ Sbjct: 162 LTFLPPKDQEGDEEEPIQMAIIGRPNVGKSSLLNAICGEQR-AIVSPIRGTTRDTI---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 D S ++ N P LVD G R+ + +G I R L+ID G Sbjct: 217 -DTSIIRENRP-WRLVDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDVCVLVIDALDG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + DQ + +++ + +V+ K D L + T + + + Y ++ TS+ Sbjct: 273 VTEQDQRLAGRIEEDGRACVVVVNKWDALEKDSHTMTAMEKELRSKLYFLDWAPMLFTSA 332 Query: 194 VKRKGIEVL 202 + + +E + Sbjct: 333 LTGQRVESI 341 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 19/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L+N L R A + PG T+ + + + Sbjct: 2 TRPVVAIIGRPNVGKSTLVNRLC-RSREAIVHDQPGVTRD------RTYQDGYWGDREFK 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G + + + + + +++D + G+ D+ + FL Sbjct: 55 VVDTGGLVF----DDDSEFLPEIREQAALALEEASVALVIVDGQQGLTAADESIAEFLRS 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K + + + E P S++ G L +L Sbjct: 111 HRCPTLLAVNKC--------ESPEQGLAMAGEFWSLGLGEPHPISAIHGAGTGELLDQVL 162 Query: 208 ETI 210 + Sbjct: 163 TFL 165 >gi|54307962|ref|YP_128982.1| GTP-binding protein EngA [Photobacterium profundum SS9] gi|81828838|sp|Q6LU45|DER_PHOPR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|46912388|emb|CAG19180.1| putative GTP-binding protein [Photobacterium profundum SS9] Length = 493 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 201 QEQPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------PMERDGQE 253 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + +++ L V L+ID R + D + F+ Sbjct: 254 YVLIDTAGVRRRKNMNQVVEKFS--VIQTLKAVEDANVVLLIIDARENISDQDLSLLGFV 311 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S + + K D L + + + + S++ G+ L + Sbjct: 312 LNSGRSLVLAVNKWDGLDNEVKERVKSELDRRLG--FIDFARIHFISALHGTGVGHLYDS 369 Query: 206 ILET 209 ++E Sbjct: 370 VIEA 373 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAELEEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ V++ + + L+ V L+D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEEGVET--KMAEQSLAAIEEADVVLFLVDGRAGLTVSDEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 +V+ KID + Sbjct: 110 DKPTFLVVNKIDGID 124 >gi|323343319|ref|ZP_08083546.1| ribosome-associated GTPase EngA [Prevotella oralis ATCC 33269] gi|323095138|gb|EFZ37712.1| ribosome-associated GTPase EngA [Prevotella oralis ATCC 33269] Length = 458 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 12/173 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P A GR NVGKSS+IN + + G T+ + F L Sbjct: 196 IPRFAVVGRPNVGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRFDKFG------FDFYL 248 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++++ + + R + L+ID G++ D ++F + K Sbjct: 249 VDTAGIRRKNKVTEDLEFYSVM--RSIRSIENSDVCILMIDATRGIEAQDMNIFQLIQKN 306 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 S +V+ K D + Q ++ + IR P +I S++ ++ I Sbjct: 307 NKSLVVVVNKWDLV-ENKDQNVIKTFENAIRERMAPFVDFPIIFASALTKQRI 358 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 61/180 (33%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + N ++VD Sbjct: 26 VAIVGRPNVGKSTLFNRLT-QSRKAIVSDTAGTTRDRQY------GKCNWNGREFSVVDT 78 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G+ D + I R L V L+D GV D+DV L + + Sbjct: 79 GGWVVNSD-----DIFEDAIRRQVLVATEEADIVIFLVDTMTGVTDWDEDVAQILRRSKL 133 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D Y + + S+ G L ++ + Sbjct: 134 PVLLVANKVD---------NSSDYYQAADFYRLGLGDPVCVSAATGGGTGDLLDLLITKL 184 >gi|282900427|ref|ZP_06308377.1| Small GTP-binding protein domain protein [Cylindrospermopsis raciborskii CS-505] gi|281194740|gb|EFA69687.1| Small GTP-binding protein domain protein [Cylindrospermopsis raciborskii CS-505] Length = 453 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 13/197 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ +P++ L + ++A GR NVGKSSL+N V + A S G T+ Sbjct: 162 IQYIPQVEELQENTEVKVAIVGRPNVGKSSLLNAFVGEER-AIVSPISGTTRDTI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ A L+D G + + + + I R V L++D GV Sbjct: 216 -DTLIEREGQAYRLIDTAGIRKKKHVEYGTEFFS--INRAFKAIRRADVVLLVLDALDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + DQ + + + + IV+ K D + + + R + T + I S++ Sbjct: 273 TEQDQKLAGRIVEDGRACIIVVNKWDVVEKDSYTIYDHEKSLEARLHFTEWADTIFVSAI 332 Query: 195 KRKGIEVLRKAILETIN 211 + +E IL+ +N Sbjct: 333 TGQRVEK----ILDLVN 345 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+ +N L + A + PG T+ + + + Sbjct: 3 LPIVAIIGRPNVGKSTFVNRLAGDQT-AIVHDEPGVTRD------RTYRPAFWQNREFLV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + I S ++D + G+ D+++ +L ++ Sbjct: 56 VDTGGLVFNDDTEFLPLIRQQAIT----ALSEACAAIFVVDGQTGLTPADEEIAEWLRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V + + K + Q + + E P S++ G L +++ Sbjct: 112 PVPTLLAVNKCESPDQGIIQAS--------EFWELGLGEPYPISAIHGSGTGDLLDDLIQ 163 Query: 209 TI 210 I Sbjct: 164 YI 165 >gi|313893405|ref|ZP_07826977.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str. F0412] gi|313442046|gb|EFR60466.1| ribosome biogenesis GTPase Der [Veillonella sp. oral taxon 158 str. F0412] Length = 444 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 11/178 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A GR NVGKSSL N L+ + + S+ G T+ + + Sbjct: 175 DEDTIHVAIIGRPNVGKSSLTNALLGQDRV-IVSDVAGTTRDSI------DTYWTHGDQK 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + IVR L V L++D + GV + D+ + + Sbjct: 228 FVLIDTAGMRRKSKIDEAVERYS--IVRSLRSVDRSDIVVLVLDAQDGVTEQDKKIAGYA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVL 202 + IV+ K D + + TL T+ + ++ S++ ++ I L Sbjct: 286 YEAGKGVVIVVNKWDLVEKDD-KTTLRFTEDIYEELGFLQFAPILFASALTKQRIHRL 342 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 18/175 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN K ++ + PG T+ +F + + ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVN-KRISIVEDIPGVTRDRIYF------DAEWLNREFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L + ++D + G+ D++V + L Sbjct: 57 DTGGIEFITENSHVIPKMMRLQAE--LAIEEADVILFVVDGKQGIVPADEEVGNILRASG 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID ++ + Y + I S+ + L Sbjct: 115 KPVVLVVNKIDSVNQEP---------NIYEFYNLGLGDPIGISAKNLMNLGDLLD 160 >gi|238855193|ref|ZP_04645512.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 269-3] gi|260664556|ref|ZP_05865408.1| ribosome-associated GTPase EngA [Lactobacillus jensenii SJ-7A-US] gi|282932513|ref|ZP_06337938.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 208-1] gi|313471978|ref|ZP_07812470.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 1153] gi|238832085|gb|EEQ24403.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 269-3] gi|239529090|gb|EEQ68091.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 1153] gi|260561621|gb|EEX27593.1| ribosome-associated GTPase EngA [Lactobacillus jensenii SJ-7A-US] gi|281303462|gb|EFA95639.1| ribosome-associated GTPase EngA [Lactobacillus jensenii 208-1] Length = 436 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 12/181 (6%) Query: 31 EIAF--SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 EIAF GR NVGKSS+IN ++ +K + +N G T+ D + + + Sbjct: 174 EIAFSVIGRPNVGKSSIINAMLGQKRV-IVANEEGTTRD-----AVDTPFVAEDGTKFRM 227 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L + +RS V L++D G+++ D+ V F Sbjct: 228 IDTAGIRRRGKVYEKTEKYSVLRAQAAIQRSD--VVCLVLDASTGIREQDKHVAGFAHDA 285 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP-TAHPEVIPTSSVKRKGIEVLRKAIL 207 IV+ K D L + + T+ + + + ++ S+ K +E L I Sbjct: 286 GRGMLIVVNKWD-LPKKDSNSAKDFTRVIREEFQYLDYAPIVFVSAKTGKNLEQLPDLIK 344 Query: 208 E 208 E Sbjct: 345 E 345 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 21/180 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A G+ NVGKS+L N ++N + LA + PG T+ N+ + Sbjct: 3 LPTVAIVGQPNVGKSTLFNRIINER-LAIVEDRPGVTRDRNYAKASWLG------HEFNI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ I + ++ + +D+ + L + Sbjct: 56 IDTGGITWEGGRIEDEIRAQADI-----AMEEADVIVMITSVALHLTDLDERIARILYRS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D E+ + Y + IP SS GI L AI+E Sbjct: 111 SKPVLLAVNKAD---------NPEQRADIYDFYSLGLGDPIPISSTHGTGIGDLLDAIVE 161 >gi|210612261|ref|ZP_03289209.1| hypothetical protein CLONEX_01409 [Clostridium nexile DSM 1787] gi|210151635|gb|EEA82642.1| hypothetical protein CLONEX_01409 [Clostridium nexile DSM 1787] Length = 442 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P IA G+ NVGKSS++N L+ + S+ G T+ + +K + Sbjct: 174 EDERPRIAIVGKPNVGKSSIVNKLLGENRV-IVSDVAGTTRDAI------DTAIKYHGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ V ++ID G+ + D + Sbjct: 227 YVFIDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLMVIDAVEGITEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 ++ IV+ K D + +T+ + + IR P E++ S+ + + L Sbjct: 285 HERGKGIIIVVNKWDAIEKHD--KTMYEYEKKIRQTLAYMPYAEIMYVSAATGQRLNKLY 342 Query: 204 KAI 206 + I Sbjct: 343 EMI 345 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 63/179 (35%), Gaps = 19/179 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ + PG T+ + ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGE-MISIVKDTPGVTRDRIYAEVTWLDK------EFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + T + + D R G+ D V L + Sbjct: 57 DTGGI----EPDSKDIILSQMREQAQIAIDTADVIVFITDVRQGLVDADSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + Q+ + Y + IP S+ R GI + +++ Sbjct: 113 KPVVLVVNKVD-----SFQKLMPDVYEF---YNLGIGDPIPISAASRLGIGDMLDEVVK 163 >gi|220928031|ref|YP_002504940.1| GTP-binding protein Era [Clostridium cellulolyticum H10] gi|254783293|sp|B8I736|ERA_CLOCE RecName: Full=GTPase Era gi|219998359|gb|ACL74960.1| GTP-binding protein Era [Clostridium cellulolyticum H10] Length = 298 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N + +K +A SN P T++ V N + L+D Sbjct: 8 VSVIGRPNVGKSTLLNTITGQK-IAIMSNKPQTTRNTIRGVIT------NKECQLILIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ + + L++ D ++ L + Sbjct: 61 PGIHKPK-----TKLGEYMVNVASETIKEVDLILFLVEANTQPGAQDVNIIQQLKQIKTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 ++L K+D +S ++ L+ +IP S++K GI+++ K L+ I Sbjct: 116 VFLILNKVDLISKDKLLAIIDSYSKLM-----DFKAIIPISALKNDGIDLILKEALDYI 169 >gi|161507651|ref|YP_001577605.1| GTP-binding protein Era [Lactobacillus helveticus DPC 4571] gi|254783658|sp|A8YVM7|ERA_LACH4 RecName: Full=GTPase Era gi|160348640|gb|ABX27314.1| GTP-binding protein [Lactobacillus helveticus DPC 4571] Length = 301 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 11 VALLGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SDKMQVVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + LS + + V +++ + + DQ + + L + V Sbjct: 64 PGI---FKPHSKLDDYMD--KASLSSLNDVDLVLFMVEP-EEIGKGDQYIANLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ P ++ L E++P S+ + GIE L I + + Sbjct: 118 VFLVINKVDQIHPNKLLLIMDSYHKL-----EGFKEILPISATQGIGIEDLLNTINKYL 171 >gi|160886572|ref|ZP_02067575.1| hypothetical protein BACOVA_04583 [Bacteroides ovatus ATCC 8483] gi|156108457|gb|EDO10202.1| hypothetical protein BACOVA_04583 [Bacteroides ovatus ATCC 8483] Length = 396 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 50/193 (25%), Positives = 76/193 (39%), Gaps = 26/193 (13%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P A IA GR N GKSSLIN L + + A S+ PG T L + Sbjct: 2 SLTDTPNASRLHIALFGRRNSGKSSLINALTGQ-DTALVSDTPGTTTDL----VSKAMEI 56 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI-- 137 + P + +D PG+ + I R L LL G Sbjct: 57 QGIGPCL-FIDTPGFDDEGELGELR------ISRTLKAIEKTDIALLLC----GDTTFSH 105 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 ++++ + L +K + VL KID +E + I P + S+ ++ Sbjct: 106 EKEMLTLLKEKNIPVIPVLNKID------IRENSDSLATYIEEEYKIRP--LLISAKEKT 157 Query: 198 GIEVLRKAILETI 210 GIE +R+AILE + Sbjct: 158 GIEQIRQAILEKL 170 >gi|326504644|dbj|BAK06613.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 303 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 18/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+LIN +V +K L+ ++ P T+H + + + L D Sbjct: 105 VAVLGKPNVGKSTLINQIVGQK-LSIVTDKPQTTRHRILGICSE------PEYQIILYDT 157 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL--DKKA 149 PG K+ ++ S CV ++ D ++ID + + + Sbjct: 158 PGVIK----KEMHKLDSMMMKNVQSAIGNADCVIVVADASKVPEKIDDMLEEGVGNKETK 213 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V +VL K D + P + LE + T +VIP S+ G++ +++ IL Sbjct: 214 VPVVLVLNKKDMIKPGEIAKKLEWYQK-----FTDVDDVIPISAKFGHGVDDIKEWILSK 268 Query: 210 I 210 + Sbjct: 269 L 269 >gi|225572013|ref|ZP_03780877.1| hypothetical protein RUMHYD_00307 [Blautia hydrogenotrophica DSM 10507] gi|225040546|gb|EEG50792.1| hypothetical protein RUMHYD_00307 [Blautia hydrogenotrophica DSM 10507] Length = 441 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P+IA G+ NVGKSSLIN LV + + S+ G T+ + +K Sbjct: 174 EDEIPKIAVVGKPNVGKSSLINKLVGEERV-IVSDIAGTTRDAI------DTKVKWQGRE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + + ER+ V ++ID GV + D + Sbjct: 227 YVFIDTAGLRRKGKIKEEIERYSVIRTVTAVERAN--VVVIMIDGVEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 +K I + K D + +T+ + IRN P E+I S+ ++ L Sbjct: 285 HEKGKGVIIAVNKWDAVEKND--KTIYRYTDKIRNTLAYMPYAELIFISAKTGLRLQRLF 342 Query: 204 KAI 206 + I Sbjct: 343 ETI 345 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 65/180 (36%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L N++ + PG T+ + + ++ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGE-NISIVKDTPGVTRDRIYAEVTWLDK------SFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P N + + T + L+D R G+ D V L + Sbjct: 57 DTGGI----EPDSNDIILSQMREQAQIAIDTADVIVFLVDVRQGMVDADAKVADMLRRST 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + Y E IP S+ R G+ + I++ Sbjct: 113 KPVVLVVNKVDSFEK--------FMMDVYEFYNLGIGEPIPVSASSRLGLGDMLDEIVKH 164 >gi|295693063|ref|YP_003601673.1| GTP-binding protein era homolog [Lactobacillus crispatus ST1] gi|295031169|emb|CBL50648.1| GTP-binding protein era homolog [Lactobacillus crispatus ST1] Length = 300 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SDEMQVVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + +S + + V +++ + + DQ + + L + V Sbjct: 64 PGI---FKPHSKLDDYMD--KASVSSLNDVDLVLFMVEP-EEMGKGDQYIANLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D + P ++ L E++P S+ + GIE L K I E + Sbjct: 118 VLLVINKVDDIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDLLKTIKEYL 171 >gi|288803890|ref|ZP_06409315.1| ribosome-associated GTPase EngA [Prevotella melaninogenica D18] gi|288333655|gb|EFC72105.1| ribosome-associated GTPase EngA [Prevotella melaninogenica D18] Length = 437 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 16/186 (8%) Query: 20 EIGLLPKA----GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 + +P+ P A GR N GKSS+IN + + G T+ + Sbjct: 162 NLKDVPEEAVDQDIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRYTK 220 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 F LVD G ++++ + + R + L++D G++ Sbjct: 221 FG------FDFYLVDTAGIRRKNKVSEDLEFYSVM--RSIRSIENSEVCILMLDATRGIE 272 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSS 193 D ++F + + S +V+ K D + Q+ ++ + IR P +I S+ Sbjct: 273 AQDMNIFQLIQRNNKSLVVVVNKWDLVEDKN-QKVIDTFENAIRKRMAPFVDFPIIFASA 331 Query: 194 VKRKGI 199 + ++ I Sbjct: 332 LTKQRI 337 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 63/179 (35%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QTRHAIVSDTAGTTRDRQY------GKCQWNGREFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V ++D G+ D+DV L + + Sbjct: 58 GG----WVVKSDDIFEDAIRKQVLVATEEADLVLFVVDTETGITDWDEDVALILRRTKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y E I S+ G L +LE + Sbjct: 114 VLLVANKVD---------NSGEYYQAAEFYKLGLGEPICISAATGGGTGDLLDILLENL 163 >gi|260438846|ref|ZP_05792662.1| GTP-binding protein Era [Butyrivibrio crossotus DSM 2876] gi|292808685|gb|EFF67890.1| GTP-binding protein Era [Butyrivibrio crossotus DSM 2876] Length = 298 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 17/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TSN P T++ V D + +D Sbjct: 8 VALIGRPNVGKSTLMNYLIGQK-IAITSNKPQTTRNRIQTVYTD------ERGQIIFLDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A+ ++ + + L++ + +Q + + L Sbjct: 61 PGIHKAKN-----KLGEYMVTVAEKTLEDVDVILWLVEPTTYIGAGEQHIIATLKNCKKP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K+D + + +++ ++ E+IP S++K E L++ I + + Sbjct: 116 VILVINKVDTVDKPEILKFIDRYSKEMK-----FSEIIPVSALKGINTEDLKETIFKYLP 170 Query: 212 Y 212 Y Sbjct: 171 Y 171 >gi|254428914|ref|ZP_05042621.1| GTPase, putative [Alcanivorax sp. DG881] gi|196195083|gb|EDX90042.1| GTPase, putative [Alcanivorax sp. DG881] Length = 469 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P +A GR NVGKS+LIN ++ + + + G T+ + Sbjct: 179 PGEDSIRVAVLGRPNVGKSTLINRMLGEERVV-VFDHAGTTRDSI------EVPFERMGR 231 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A L+D G + V+ + +++ L + V ++ID R G+ D + + Sbjct: 232 AYTLIDTAGVRRRGKVFEMVEKFS--VIKALQAMEAAQVVVVVIDAREGITDQDLHLLGY 289 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + I + K D L + + P ++ S++ G+ L Sbjct: 290 ALDSGRALMIAVNKWDGLEADHKERVRVNLGRRLEFAP--WVKIKFISALHGTGVGDLWG 347 Query: 205 AILET 209 + + Sbjct: 348 MVEQA 352 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GDGQLGGYLYTVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G +D + + L V ++D R G+ D+ + S L K Sbjct: 56 DTGGIG---ENDDGIDV--PMTSQSLQAVGEADVVLFMVDGRAGLTAADEQIASELRKLP 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ K D + +A + EV+P ++ +G+ + + ILE Sbjct: 111 KPTYLIVNKTDGVDADSAMS---------EFFALGLTEVLPIAAAHGRGVTSMIEHILE 160 >gi|110834717|ref|YP_693576.1| GTP-binding protein [Alcanivorax borkumensis SK2] gi|123149362|sp|Q0VNE4|DER_ALCBS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|110647828|emb|CAL17304.1| GTP-binding protein, putative [Alcanivorax borkumensis SK2] Length = 471 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 11/185 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P +A GR NVGKS+LIN ++ + + + G T+ + Sbjct: 181 PGEDSIRVAVLGRPNVGKSTLINRMLGEERVV-VFDHAGTTRDSI------EVPFERMGR 233 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A L+D G + V+ + +++ L + V ++ID R G+ D + + Sbjct: 234 AYTLIDTAGVRRRGKVFEMVEKFS--VIKALQAMEAAQVVVVVIDAREGITDQDLHLLGY 291 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + I + K D L + + P ++ S++ G+ L Sbjct: 292 ALDSGRALMIAVNKWDGLEADHKERVRVNLGRRLEFAP--WVKIKFISALHGTGVGDLWG 349 Query: 205 AILET 209 + + Sbjct: 350 MVEQA 354 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 5 PVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GDGQLGGYLYTVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G +D + + L V ++D R G+ D+ + S L K Sbjct: 58 DTGGIG---ENDDGIDV--PMTSQSLQAVGEADVVLFMVDGRAGLTAADEQIASELRKLP 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ K D + +A + EV+P ++ +G+ + + ILE Sbjct: 113 KPTYLIVNKTDGVDADSAMS---------EFFALGLTEVLPIAAAHGRGVTSMIEHILE 162 >gi|53802988|ref|YP_115285.1| GTPase family protein [Methylococcus capsulatus str. Bath] gi|81823578|sp|Q603B5|DER_METCA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|53756749|gb|AAU91040.1| GTPase family protein [Methylococcus capsulatus str. Bath] Length = 463 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 11/180 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 G IA GR NVGKS+L+N ++ + + + PG T+ + + Sbjct: 174 EGGIRIAVVGRPNVGKSTLVNRILGEERVV-VYDQPGTTRDSIYI------PFERRGERY 226 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + V+ + +++ V L+D G+ D ++ + Sbjct: 227 TLIDTAGIRRRARVNEGVEKFS--VIKSFQAIEKAHVVIYLVDASEGLTDQDANLLGMVL 284 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I K D L P ++ + + A I S++ G+ VL A+ Sbjct: 285 EIGRGLLIGFNKWDGLEPEQREKVKRQIDVKLPFLEFAKKYFI--SALHGTGVGVLMDAV 342 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 65/182 (35%), Gaps = 21/182 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR+NVGKS+L N L ++ A ++ PG T+ + ++ + Sbjct: 2 LPVVALIGRTNVGKSTLFNYLTRTRD-ALVADFPGLTRDRQY------GRVQRGERDYFV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G A + D + L E + L+D G+ D+ + L + Sbjct: 55 VDTGGII--EAAEGIDDQAMKQVDHVLDE---ADVILFLVDVHAGMTAGDELIADRLRRI 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V KID + + E + S+ G+ L + + Sbjct: 110 NKPVLLVANKID---------GTQALIAGAEFHAFGLGEPLLISAAHGTGVHALLERVEA 160 Query: 209 TI 210 + Sbjct: 161 LL 162 >gi|289578647|ref|YP_003477274.1| ribosome-associated GTPase EngA [Thermoanaerobacter italicus Ab9] gi|289528360|gb|ADD02712.1| ribosome-associated GTPase EngA [Thermoanaerobacter italicus Ab9] Length = 439 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 78/196 (39%), Gaps = 19/196 (9%) Query: 21 IGLLPKAGP------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + LP+ G +IA GR NVGKSSL+N ++ + + S+ PG T+ Sbjct: 162 VKKLPQEGLEYSEETIKIAVIGRPNVGKSSLVNKILGEERV-IVSDIPGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + L+D G ++++ + L ERS + L+ID G Sbjct: 216 -DTPFSKDGKNYVLIDTAGIRRKSRISESIERYSVLRALTAIERSDI--CLLMIDAIEGP 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTS 192 + D + + + IV+ K D + T+ + +IR + ++ S Sbjct: 273 AEQDTKIAGYAFENGKGIIIVVNKWDAIKKN--NNTVNEYTKMIREKLSFISFAPILFIS 330 Query: 193 SVKRKGIEVLRKAILE 208 + + + + + + + Sbjct: 331 AKTGQRVHRVLQTVDK 346 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 60/182 (32%), Gaps = 25/182 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L N ++ K ++ + PG T+ N + LVD Sbjct: 6 VSIVGRPNVGKSTLFNKIMG-KRISIVEDKPGVTRDRIC------GNAEWLNKKFILVDT 58 Query: 92 PGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G K I + L+D + G+ D+++ L + Sbjct: 59 GGLDPDAEDIIFSKVRLQVEAAIEAS-------EVILFLVDAKEGLMPEDEEIADILRRA 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D + IP S+ GI L I++ Sbjct: 112 KKEIILVCNKVDNFKELPP--------TYYDFFSLGLGNPIPISASNGLGIGELLDEIVK 163 Query: 209 TI 210 + Sbjct: 164 KL 165 >gi|301167244|emb|CBW26826.1| putative GTP-binding protein [Bacteriovorax marinus SJ] Length = 613 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 15/183 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKSSL N L+ +++ A T + PG T+ ++ + + + LVD Sbjct: 8 VSLIGRPNVGKSSLFNRLMQKQHKAITHDQPGVTRDRHYGITTIEDLQDVDAADIILVDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLS-----ERSTL---RCVYLLIDCRHGVKQIDQDVFS 143 G+ R ++ +S ++ + R + V ++D R G D + Sbjct: 68 GGFYPERIDERGRNSEEENANKFFNIMTDHARMAIGESDLVLFVVDVREGALPFDNTIAD 127 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + +V K D S A E ++ I + E+ TS+ +G+ LR Sbjct: 128 YIRTTKKPFLVVANKYD--SDKQAGEEIDFYSLGIDS-----DELFTTSATHGRGVTFLR 180 Query: 204 KAI 206 + I Sbjct: 181 EKI 183 Score = 64.8 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 59/141 (41%), Gaps = 9/141 (6%) Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + N+ ++ ++D G + ++S + R L + V ++ID +G+ Sbjct: 369 EKKEDDNHWRSIHIIDTAGIRRQKTVNGFIESQS--VYRSLRSITESDVVIVMIDATNGI 426 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-----PTAHPEVI 189 D+ + +K S + L K+D + E + + + N ++I Sbjct: 427 GHQDRRLIDISLEKGKSVIVALNKMDLMREQLPDEAAK--REWLNNLRRDIPWLDFCDII 484 Query: 190 PTSSVKRKGIEVLRKAILETI 210 S+ KG++ L++A+ +TI Sbjct: 485 TISAKHNKGMKKLKEALKKTI 505 Score = 55.5 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 9/118 (7%) Query: 15 LRGVPEIGL--LPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLN-- 69 L+ +PEI P+ +IA G N GKS+L+N+LV + A S+ G T Sbjct: 195 LKSMPEISKGVTPREEVVSKIALIGAPNAGKSTLLNLLVGAQR-ALVSDIAGTTVDPIEG 253 Query: 70 FFVPKDFSNLKNNLPAMALVDMPGYGYARAPK---KNVDSWGGLIVRYLSERSTLRCV 124 FF K G + + + N D + ++ Y E + + V Sbjct: 254 FFDLYFGKEAKILEEDQGFSSNDGLLFKQYEEFRRNNADVYQQMVDSYAIEEDSDKNV 311 >gi|187778474|ref|ZP_02994947.1| hypothetical protein CLOSPO_02068 [Clostridium sporogenes ATCC 15579] gi|226950371|ref|YP_002805462.1| GTP-binding protein Era [Clostridium botulinum A2 str. Kyoto] gi|254783292|sp|C1FVS6|ERA_CLOBJ RecName: Full=GTPase Era gi|187772099|gb|EDU35901.1| hypothetical protein CLOSPO_02068 [Clostridium sporogenes ATCC 15579] gi|226842790|gb|ACO85456.1| GTP-binding protein Era [Clostridium botulinum A2 str. Kyoto] Length = 296 Score = 114 bits (287), Expect = 6e-24, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ K L+ S P T++ + + + + VD Sbjct: 7 VTIVGRPNVGKSTLLNAIMKEK-LSIVSCRPQTTRNNIQTILTE------DNYQLVFVDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ + V LI+ + D + L + V Sbjct: 60 PGIHKPK-----HKLGEYMVKSASDAMKDVDLVLFLINPDEKPGRGDLFIIEQLKEVKVP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID+ ETL+ L+ E+IP S++K K +++L++ + + I Sbjct: 115 VFLVLNKIDENPQEKVAETLKTYSELME-----FQEIIPISALKGKNVDLLKELMFKYI 168 >gi|312796097|ref|YP_004029019.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454] gi|312167872|emb|CBW74875.1| GTP-binding protein [Burkholderia rhizoxinica HKI 454] Length = 444 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 75/176 (42%), Gaps = 11/176 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + + PG T+ + + + L+D Sbjct: 180 KIAIVGRPNVGKSTLVNALLGEERV-IAFDLPGTTRDSIYI------DFERQGRPYTLID 232 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + +V+ L + V LL+D R + + D + F+ ++ Sbjct: 233 TAGLRKRGKVFEAVEKFS--VVKTLQSIADANVVILLLDARQDISEQDAHIAGFVVEQGR 290 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + I + K D L + T ++ A I S+ ++ GI L +++ Sbjct: 291 ALVIGVNKWDGLDEHVRERTKADLARKLKFLDFAKSHYI--SAAEKTGIGALLRSV 344 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFVVDGRNGLAPQDKTIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ K E ++ + Y + S+ G+ + Sbjct: 112 RPIFLVVNKA---------EGMKYSAVAADFYELGLGDPRAISAAHGDGVSEM 155 >gi|326403270|ref|YP_004283351.1| GTP-binding protein EngA [Acidiphilium multivorum AIU301] gi|325050131|dbj|BAJ80469.1| GTP-binding protein EngA [Acidiphilium multivorum AIU301] Length = 451 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 68/188 (36%), Gaps = 26/188 (13%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 A P +A GR NVGKS+L N L K +A ++ PG T+ + + L Sbjct: 5 PARTPRVAICGRPNVGKSTLFNRLAG-KRIALVADEPGVTRDRK----EAWGELAGVKVQ 59 Query: 86 MALVDMPG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G P + S G + V + D R G+ D+ Sbjct: 60 --LIDTAGLEEAPPDTLPGRMRASTGTAVDE-------ADLVLFVFDARAGLLPEDRHFA 110 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++L + +V K + + LE Y E + S+ +G+ L Sbjct: 111 AWLRRAGKPVIVVANKAE--GRGGSNAALEA-------YELGLGEPVAVSAEHNEGVSDL 161 Query: 203 RKAILETI 210 I+E + Sbjct: 162 IDRIIEAL 169 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 67/198 (33%), Gaps = 17/198 (8%) Query: 21 IGLLPKAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 I LP+ E +A GR N GKS+L+N L+ + + T PG T+ Sbjct: 166 IEALPETDEVEDEDGERPMHLAIVGRPNAGKSTLMNRLLGEQRV-ITGPEPGLTRDAIAA 224 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 D + L D G + ++ + V L ID Sbjct: 225 ELTDSAG-----RRYRLFDTAGLRRRARVEAGLEKLS--TSSTIEALKFADTVVLAIDAH 277 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G+ D + ++++ + I LTK D + + ++P Sbjct: 278 EGLHDQDFTIARLIEREGRACVIALTKWDLVEDRDRTRRAILERMEHSLSQMKGITLVPL 337 Query: 192 SSVKRKGIEVLRKAILET 209 S +G++ L A+ E Sbjct: 338 SGETGEGVKKLLPAVREA 355 >gi|319941508|ref|ZP_08015835.1| GTP-binding protein engA [Sutterella wadsworthensis 3_1_45B] gi|319804982|gb|EFW01821.1| GTP-binding protein engA [Sutterella wadsworthensis 3_1_45B] Length = 451 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 13/184 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 ++ +GR N GKS+LIN LV + + + PG T+ + + + Sbjct: 180 PRRIKVTLAGRPNAGKSTLINALVGEERV-IAFDMPGTTRDAIKI------DFEYDGRPY 232 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G + V+ + +V+ L V L++D + GV + D + ++ Sbjct: 233 ELVDTAGLRKKGRVFEAVEKFS--VVKTLQAIEDANVVILVVDAKEGVSEGDAHIAGYVL 290 Query: 147 KKAVSYQIVLTKIDKLSPTTAQE-TLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + + K D L + L+ + L + +I S++KR G+ L +A Sbjct: 291 EAGRALVVAVNKWDLLDSYERERFNLDLERKL---HFLRWARMIRISALKRNGLNHLMRA 347 Query: 206 ILET 209 + E Sbjct: 348 VDEA 351 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 57/176 (32%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+ N L ++ A ++ PG T+ + + + Sbjct: 2 LPVIALVGRPNVGKSTFFNRLTRSRD-AIVADFPGLTRDRQYGQGR------VGPGPYIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G+ R + + V L D R G+ D + L + Sbjct: 55 VDTGGFEPVRTEG----IVQAMAGQAELAIEEADVVLFLTDARAGLTPQDIRIAQHLRRA 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +++ K + L+ T E Y E S +G+ Sbjct: 111 DRPVVLLVNKAEGLTETAKAE----------FYELGLGEPHLVSGAHGQGVRDALD 156 >gi|148259762|ref|YP_001233889.1| GTP-binding protein EngA [Acidiphilium cryptum JF-5] gi|146401443|gb|ABQ29970.1| tRNA modification GTPase trmE [Acidiphilium cryptum JF-5] Length = 451 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 68/188 (36%), Gaps = 26/188 (13%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 A P +A GR NVGKS+L N L K +A ++ PG T+ + + L Sbjct: 5 PARTPRVAICGRPNVGKSTLFNRLAG-KRIALVADEPGVTRDRK----EAWGELAGVKVQ 59 Query: 86 MALVDMPG---YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 L+D G P + S G + V + D R G+ D+ Sbjct: 60 --LIDTAGLEEAPPDTLPGRMRASTGTAVDE-------ADLVLFVFDARAGLLPEDRHFA 110 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++L + +V K + + LE Y E + S+ +G+ L Sbjct: 111 AWLRRAGKPVIVVANKAE--GRGGSNAALEA-------YELGLGEPVAVSAEHNEGVSDL 161 Query: 203 RKAILETI 210 I+E + Sbjct: 162 IDRIIEAL 169 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 67/198 (33%), Gaps = 17/198 (8%) Query: 21 IGLLPKAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 I LP+ E +A GR N GKS+L+N L+ + + T PG T+ Sbjct: 166 IEALPETDEAEDEDGERPMHLAIVGRPNAGKSTLMNRLLGEQRV-ITGPEPGLTRDAIAA 224 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 D + L D G + ++ + V L ID Sbjct: 225 ELTDSAG-----RRYRLFDTAGLRRRARVEAGLEKLS--TSSTIEALKFADTVVLAIDAH 277 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G+ D + ++++ + I LTK D + + ++P Sbjct: 278 EGLHDQDFTIARLIEREGRACVIALTKWDLVEDRDRTRRAILERLEHSLSQMKGITLVPL 337 Query: 192 SSVKRKGIEVLRKAILET 209 S +G++ L A+ E Sbjct: 338 SGETGEGVKKLLPAVREA 355 >gi|293115597|ref|ZP_05792245.2| ribosome-associated GTPase EngA [Butyrivibrio crossotus DSM 2876] gi|292809015|gb|EFF68220.1| ribosome-associated GTPase EngA [Butyrivibrio crossotus DSM 2876] Length = 446 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 13/180 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA G+ NVGKSS+IN +V + S+ G T+ +++ N Sbjct: 182 RPRIAIVGKPNVGKSSIINKIVGESRV-IVSDIAGTTRDAI------DTDITYNGNEYVF 234 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 235 IDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHER 292 Query: 149 AVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K D + E + K ++ P A E++ S+ + + + I Sbjct: 293 GKGIIVVVNKWDAIEKNDKTIYEHTNRIKDILSFMPYA--EILFISAKTGQRVGKIFDTI 350 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 70/180 (38%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + ++ + PG T+ + +++ L+ Sbjct: 9 PVVAIVGRPNVGKSTLFNALAGEQ-ISIVKDTPGVTRDRIY------ADVTWLNYNFTLI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ + + ++ + ++D R G+ D V + L + Sbjct: 62 DTGGI----EPESKDIILSQMREQAEIAIASADVIIFMVDVRQGLVDSDSKVANMLRRSG 117 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + + Y + +P SSV + GI + +++ Sbjct: 118 KPVVLVVNKVD--------SFQKMMTDVYEFYNLGIGDPVPVSSVGKLGIGDMLDEVVKH 169 >gi|229514086|ref|ZP_04403548.1| GTP-binding protein Era [Vibrio cholerae TMA 21] gi|229349267|gb|EEO14224.1| GTP-binding protein Era [Vibrio cholerae TMA 21] Length = 324 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 23/204 (11%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 ++S + PE G +A GR NVGKS+L+N L+ +K ++ TS P T+H Sbjct: 14 SRSEGQTVTSTPEDQHC---GF--VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRH 67 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYL 126 V + VD PG + + L+ R S S + V Sbjct: 68 RIMGVETE------GKYQAIYVDTPGLHI-----EEKRAINRLMNRAASSSLSDVNLVLF 116 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 +++ H D+ VF+ L K + + K+D++ E + L + P Sbjct: 117 VVEGTH-WTADDEMVFNKLQKANFPVVLCVNKVDQVK--DRNEVMLHMLELSKRMP--FV 171 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 +++P S+ + K +VL+K + E + Sbjct: 172 DIVPISAKQGKNTDVLKKHVREHL 195 >gi|146308511|ref|YP_001188976.1| GTP-binding protein EngA [Pseudomonas mendocina ymp] gi|166225842|sp|A4XY28|DER_PSEMY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145576712|gb|ABP86244.1| small GTP-binding protein [Pseudomonas mendocina ymp] Length = 492 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++A GR NVGKS+L+N ++ + + + G T+ + ++P + + K L Sbjct: 193 EKDGIKLAIIGRPNVGKSTLVNRMLGEERV-IVYDQAGTTRD-SIYIPFERDDEKYTLID 250 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 A V G + K +V V+ L V ++D R GV D ++ F+ Sbjct: 251 TAGVRRRGKIFEAVEKFSV-------VKTLQAIQDSNVVVFVMDAREGVVDHDLNLLGFV 303 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + Q+ KT+ R + ++ S++ G+ L Sbjct: 304 LESGRALVIALNKWDGMDQG--QKDYVKTELERRLFFVDFADIHFISALHGTGVGHL 358 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A + G T+ + K + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLTRSRD-AIVGDLSGLTRDRQY------GEAKWQGRTYIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ +D+ + + L V L+D R G+ DQ + L ++ Sbjct: 55 IDTGGI---SGDEEGIDA--KMAEQSLQAIEEADAVLFLVDARAGMTASDQMIGEHLRRR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D L A+ P E + + +GI + +A+L Sbjct: 110 NKRSFLVVNKVDNLDVDLARAEFS---------PMGLGEPLAIAGAHGRGITQMLEAVL 159 >gi|325855153|ref|ZP_08171776.1| ribosome biogenesis GTPase Der [Prevotella denticola CRIS 18C-A] gi|325483890|gb|EGC86834.1| ribosome biogenesis GTPase Der [Prevotella denticola CRIS 18C-A] Length = 437 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 72/187 (38%), Gaps = 14/187 (7%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L+ P+ + P A GR N GKSS+IN + + G T+ + Sbjct: 163 LKDAPDESV--DQDIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRYT 219 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 F LVD G ++++ + + R + L++D G+ Sbjct: 220 KFG------FDFYLVDTAGIRRKNKVTEDLEFYSVM--RSIRSIENSDVCILMLDATRGI 271 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTS 192 + D ++F + + S +V+ K D + Q+ ++ + IR P +I S Sbjct: 272 EAQDMNIFQLIQRNNKSLVVVVNKWDLVEDKN-QKVIDTFENAIRKRMAPFVDFPIIFAS 330 Query: 193 SVKRKGI 199 ++ ++ I Sbjct: 331 ALTKQRI 337 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 63/179 (35%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QTRHAIVSDTAGTTRDRQY------GKCQWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V L+D GV D+DV L + + Sbjct: 58 GG----WVVKSDDIFEDAIRKQVLVATEEADLVLFLVDTETGVTDWDEDVAMILRRTKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y E I S+ G L +LE + Sbjct: 114 VLLVANKVD---------NSGEYYQAAEFYKLGLGEPICVSAATGGGTGDLLDILLEKL 163 >gi|119944927|ref|YP_942607.1| GTP-binding protein EngA [Psychromonas ingrahamii 37] gi|166225845|sp|A1SU43|DER_PSYIN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|119863531|gb|ABM03008.1| small GTP-binding protein [Psychromonas ingrahamii 37] Length = 489 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 73/183 (39%), Gaps = 11/183 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+L N ++ + + + PG T+ + + + L Sbjct: 200 PIKLALIGRPNVGKSTLTNRILGEERV-LVYDLPGTTRDSIYI------PMSRDDREYIL 252 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + +++ L V L+ID R G+ D + F Sbjct: 253 IDTAGVRKRKKVNETVEKFS--VIKTLQAIEDCNVVLLIIDARDGISDQDLSLLGFTLNA 310 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 S I + K D ++ + + + ++ S++ G+ L +++ E Sbjct: 311 GRSLVIAVNKWDGMTEYDKERVKSELDRRLG--FIDFAKIHFISALHGTGVGHLYESVEE 368 Query: 209 TIN 211 + Sbjct: 369 AYD 371 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 62/171 (36%), Gaps = 21/171 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + K + + Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKIDEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L+ V L+D R G+ D+ + L K+ Sbjct: 55 IDTGGITGDEEGIDALMAGQSLL-----AIDEADAVLFLVDARAGMTIADEAIADHLRKQ 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V K D + + Y EV ++ + KG+ Sbjct: 110 DKKVFVVANKTDGVDADSVCA---------EFYALGLGEVYHIAAAQGKGV 151 >gi|323486971|ref|ZP_08092286.1| hypothetical protein HMPREF9474_04037 [Clostridium symbiosum WAL-14163] gi|323692018|ref|ZP_08106266.1| GTP-binding protein engA [Clostridium symbiosum WAL-14673] gi|323399743|gb|EGA92126.1| hypothetical protein HMPREF9474_04037 [Clostridium symbiosum WAL-14163] gi|323503941|gb|EGB19755.1| GTP-binding protein engA [Clostridium symbiosum WAL-14673] Length = 444 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 13/180 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA G+ NVGKSS+IN L+ + S+ G T+ + + +N Sbjct: 179 RPRIAIVGKPNVGKSSIINKLLGENRV-IVSDIAGTTRDAV------DTEIIHNGTEYVF 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 232 IDTAGLRRKSKIKEELERYS--IIRTVTAVERADVVLVVIDAVEGVTEQDAKIAGIAHER 289 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 IV+ K D + T +T+ + I+ + P E I S+ + I L + I Sbjct: 290 GKGIIIVVNKWDAIEKTD--KTIYEYTNKIKMTLSFIPYAEFIFISAATGQRINKLYEII 347 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + ++ A L+ Sbjct: 6 PVVAVVGRPNVGKSTLFNVLAG-DMISIVKDTPGVTRDRIY------ADCTWLDKAFTLI 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + +T + ++D R G+ D V L K Sbjct: 59 DTGGI----EPDTKDVILAQMREQAEIAIATADVIIFIVDVRQGLTDSDSKVADMLRKSK 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D + +K + Y + + S+ R G+ L A++ Sbjct: 115 KPVVLAVNKVD---------SFQKFGNDVYEFYNLGIGDPVGISAASRLGLGELLDAVV 164 >gi|293604545|ref|ZP_06686950.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553] gi|292817126|gb|EFF76202.1| GTP-binding protein EngA [Achromobacter piechaudii ATCC 43553] Length = 454 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 11/185 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G L ++A GR NVGKS+LIN L+ + + + PG T+ + Sbjct: 181 GDLEHDHRIKLAIVGRPNVGKSTLINTLMGEERV-IAFDLPGTTRDAIEI------DFDR 233 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + L+D G + V+ + +++ L V L++D + + D + Sbjct: 234 DGRRYTLIDTAGLRKRGKVFEAVEKFS--VIKTLQAIEASNVVLLMLDAHTEISEQDAHI 291 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 F+ + + + + K D L + + + +R + V S+++ +GI+ Sbjct: 292 AGFVLETGRAVVVAINKWDGLDGEEKERIEREFQRKLR--FLSFARVHTISALRGQGIKP 349 Query: 202 LRKAI 206 L K+I Sbjct: 350 LLKSI 354 Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 27/185 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L R A ++ G T+ + + + + Sbjct: 5 PVVALVGRPNVGKSTLFNRLT-RSRAALVADFSGLTRD------RHYGEGRVGEIPFIAI 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL---RCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ G L+ R + V L+D R G+ D ++ L Sbjct: 58 DTGGFEPVAKD-------GILLEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIAQLLR 110 Query: 147 KKA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 K + + K E + + + + P S+ GI L + Sbjct: 111 KSGQQRVLLAVNKA---------EGMGLGPAISEFHELGLGQPYPISAAHGDGIVDLIEL 161 Query: 206 ILETI 210 L+ + Sbjct: 162 ALKDL 166 >gi|284929084|ref|YP_003421606.1| ribosome-associated GTPase EngA [cyanobacterium UCYN-A] gi|284809543|gb|ADB95248.1| ribosome-associated GTPase EngA [cyanobacterium UCYN-A] Length = 452 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 15/188 (7%) Query: 21 IGLLPKAGP---PE---IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 I LP + PE ++ GR NVGKSSL+N + K A S G T+ + Sbjct: 162 ILHLPSSNKMFDPEEINVSIVGRPNVGKSSLLNAFLGEKR-AIVSPIAGTTRDVI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++ LVD G + + + + I R V L+ID GV Sbjct: 216 -DTIVERKGKVYRLVDTAGIRRKKNVEYGAEFFS--INRAFKAIRRADVVLLVIDAIDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + + + S IV+ K D + K + R Y +I S+ Sbjct: 273 TEQDIKLADRIIDEGRSAIIVVNKWDAVEKDAYTIYSYKKNVMNRLYFMEWANLIFISAK 332 Query: 195 KRKGIEVL 202 + IE + Sbjct: 333 SGQRIEKI 340 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 65/180 (36%), Gaps = 19/180 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L+N L + A + PG T+ + Sbjct: 2 TLPIVAVIGRPNVGKSTLVNRLA-KNRQAIVHDEPGITRDRVY------RQAFWRTHDFL 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G + N + + + ++ S ++D + G D ++ ++L + Sbjct: 55 VVDTGGLVFN----DNTEFLPLIREQAMTALSEASVAVFVVDGQLGPTTGDYEIGNWLRQ 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + V + + K + ++ ++ + E P S + G ++ Sbjct: 111 QKVPVLLAVNKC----ESPEHGLIQAAQF----WELGLGEPYPISGIHGNGTGEFLDKLI 162 >gi|330504675|ref|YP_004381544.1| GTP-binding protein EngA [Pseudomonas mendocina NK-01] gi|328918961|gb|AEB59792.1| GTP-binding protein EngA [Pseudomonas mendocina NK-01] Length = 492 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++A GR NVGKS+L+N ++ + + + G T+ + ++P + + K L Sbjct: 193 EKDGIKLAIIGRPNVGKSTLVNRMLGEERV-IVYDQAGTTRD-SIYIPFERDDEKYTLID 250 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 A V G + K +V V+ L V ++D R GV D ++ F+ Sbjct: 251 TAGVRRRGKIFEAVEKFSV-------VKTLQAIQDSNVVVFVMDAREGVVDHDLNLLGFV 303 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I L K D + Q+ KT+ R + ++ S++ G+ L Sbjct: 304 LESGRALVIALNKWDGMDQG--QKDYVKTELERRLFFVDFADIHFISALHGTGVGHL 358 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A + G T+ + K + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLTRSRD-AIVGDLSGLTRDRQY------GEAKWQGRTYIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ +D+ + + L V L+D R G+ DQ + L ++ Sbjct: 55 IDTGGI---SGDEEGIDA--KMAEQSLQAIEEADAVLFLVDARAGMTASDQMIGEHLRRR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D L A+ P E + + +GI + + +L Sbjct: 110 NKQSFLVVNKVDNLDVDLARAEFS---------PMGLGEPLAIAGAHGRGITQMLEVVL 159 >gi|215482646|ref|YP_002324840.1| GTP-binding protein Era [Acinetobacter baumannii AB307-0294] gi|213986558|gb|ACJ56857.1| GTP-binding protein Era [Acinetobacter baumannii AB307-0294] Length = 301 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 1 MAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 53 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID H Q D V L + Sbjct: 54 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDA-HKWTQNDDLVLEKLKNADM 107 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 108 PVILVINKADTFGDKREILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 163 Query: 211 NY 212 Y Sbjct: 164 PY 165 >gi|88703668|ref|ZP_01101384.1| GTP-binding protein engA [Congregibacter litoralis KT71] gi|88702382|gb|EAQ99485.1| GTP-binding protein engA [Congregibacter litoralis KT71] Length = 495 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 72/181 (39%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 G +A GR NVGKS+L+N ++ + + + PG T+ + Sbjct: 195 DHGGTRVAIVGRPNVGKSTLVNRILGEERVV-VYDQPGTTRDSVYI------KFVREGRP 247 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ ++ + I++ LS S V LL+D + G+ D + Sbjct: 248 YTLIDTAGVRRRKNVREAIEKFS--IIKTLSAISDANVVVLLVDGQEGLVDQDLHLLGHC 305 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + + K D L P + + +R ++ S++ G+ L + Sbjct: 306 LEAGRALVLAVNKWDGLDPDQKEMIRSELDRRLR--FVEFADMHFISALHGSGVGTLFGS 363 Query: 206 I 206 I Sbjct: 364 I 364 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 21/182 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A +N G T+ + +++ A + Sbjct: 2 LPSIALVGRPNVGKSTLFNQLTRSRD-ALVANLSGLTRDRKY------GEGRSDDRAFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V LL+D R G+ +D+ + +L ++ Sbjct: 55 IDTGG-----VSGDEEGIDAAMAEQSLLAIEEADIVLLLVDARDGLNPVDEQLVQYLRQQ 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + +V+ KID P A + + + ++ +G+ + +++LE Sbjct: 110 SRDFHLVVNKIDGRDPDVA---------VSDFHALGIASMHAIAASHGRGVRQMIESVLE 160 Query: 209 TI 210 TI Sbjct: 161 TI 162 >gi|288932595|ref|YP_003436655.1| GTP-binding protein HSR1-related protein [Ferroglobus placidus DSM 10642] gi|288894843|gb|ADC66380.1| GTP-binding protein HSR1-related protein [Ferroglobus placidus DSM 10642] Length = 192 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 34/192 (17%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F+GRSNVGKS+L L K R PG T N +D + + D Sbjct: 9 EIIFAGRSNVGKSTLFYQLFGVK--VRRGKKPGTTIKPNHLQYRD----------LLVTD 56 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDC-----------RHGVKQID 138 +PG+GY + + +VRY+ E + ++ +ID + G ++ Sbjct: 57 LPGFGYVWKGRNLSEKVKDFVVRYIEENAHRIKLAVEVIDAKAFCEIAERWDKRGYIPVE 116 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 ++F FL + + + K DK+ + +E+ + I+ E+IPTS+ K + Sbjct: 117 VEMFDFLKELGIETVVAANKFDKV---ENESVIEEIRKWIK------GEIIPTSAKKGE- 166 Query: 199 IEVLRKAILETI 210 +E +R+ + + Sbjct: 167 VEGIRRWLKSKL 178 >gi|306821539|ref|ZP_07455139.1| GTP-binding protein Era [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550433|gb|EFM38424.1| GTP-binding protein Era [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 316 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 27/186 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GRSNVGKS+L+N ++ K +A TS+ P T+ + D + +D Sbjct: 26 VSIVGRSNVGKSTLLNAIIGEK-IAITSDKPQTTRSRIKGIYND------EESQIIFLDT 78 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTL-----RCVYLLIDCRHGVKQIDQDVFSFLD 146 PG + + Y+++ +L + ++D + ++D ++ L Sbjct: 79 PGVQKPK----------NKLGSYMAKEVSLSSSTADVIVYVVDESEKIGRLDHNIIENLK 128 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K +VL KIDKLS + ++ + +++P ++K++ + L K I Sbjct: 129 KTKQPKILVLNKIDKLSEDKIFDIIKMYDEI-----GIFDDIVPICAIKKRNVVELIKTI 183 Query: 207 LETINY 212 + + Y Sbjct: 184 KKYLVY 189 >gi|262371080|ref|ZP_06064402.1| GTPase [Acinetobacter johnsonii SH046] gi|262313966|gb|EEY95011.1| GTPase [Acinetobacter johnsonii SH046] Length = 469 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K +A GR NVGKS+L+N L+ + + + PG T+ + + + Sbjct: 173 KNTGLRLAIIGRPNVGKSTLVNRLLGEERVV-AFDQPGTTRDSIYI------PYERDGRQ 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + IV+ L + +++D R GV + D + + Sbjct: 226 YTLIDTAGVRRKGKVDEMIEKFS--IVKTLQAIKDAHVIVVVLDAREGVVEQDLHLIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + I + K D +S ++ P A +V S++ G+ L Sbjct: 284 LEAGRAMVIAINKWDNMSEYDRKQCKLDVDRRFDFIPWA--KVHLISALHGTGVGDL 338 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 21/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + + A ++ G T+ + + + +V Sbjct: 3 PVIALIGRPNVGKSTLFNQIT-KSRDALVADFAGLTRDRKY------GDAVFQNKSFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G + + + + + ++D R G+ D+ + L Sbjct: 56 DTGGIGENEGGID-----SYMAEQSKTAINEADIIVFVVDARAGLLASDEQIARELRTLG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K+D + A L+ Y E + ++ +G++ + + +L + Sbjct: 111 KKVYLVANKVDGVHAEAA---------LVEFYKLGMGEPMQVAASHGRGVQQMLEDVLSS 161 Query: 210 I 210 + Sbjct: 162 V 162 >gi|330446942|ref|ZP_08310593.1| GTP-binding protein Era [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491133|dbj|GAA05090.1| GTP-binding protein Era [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 301 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N LV +K L+ TS P T+H V + VD Sbjct: 10 IAIVGRPNVGKSTLLNRLVGQK-LSITSRKPQTTRHRIMGVDT------RDGYQAVYVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S + + V L+D D+ V + L K + Sbjct: 63 PGLHI-----EEKRTINRLMNRAASSSLTDVELVLFLVDGTM-WTDDDEMVLNKLAKSQL 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ K+D + E + L +V+P S+ I+ + K + E + Sbjct: 117 PTVLLVNKVDNVK--DKHELFPHLQELASK--MEFVDVVPVSAKHGTNIDAVEKIVREHL 172 >gi|325956928|ref|YP_004292340.1| GTPase Era [Lactobacillus acidophilus 30SC] gi|325333493|gb|ADZ07401.1| GTPase Era [Lactobacillus acidophilus 30SC] Length = 301 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 11 VALIGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SDDMQIVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + LS + + V +++ + + DQ + L + V Sbjct: 64 PGI---FKPHSKLDDYMD--KASLSSLNDVDLVLFMVEP-EKIGKGDQYIADLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ P ++ L E++P S+ + GIE L + + + Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDLLATLNKYL 171 >gi|300741227|ref|ZP_07071248.1| ribosome-associated GTPase EngA [Rothia dentocariosa M567] gi|300380412|gb|EFJ76974.1| ribosome-associated GTPase EngA [Rothia dentocariosa M567] Length = 529 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 23/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++IN ++ R+ A + PG T+ + + LV Sbjct: 76 PVVAIVGRPNVGKSTIINRILGRRE-AVVEDKPGVTRDRVSY------KAEWVGKRFTLV 128 Query: 90 DMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G+ AR V + V V L++D R G+ D+ + L + Sbjct: 129 DTGGWESDARGIDAQVADQAEIAV------EQADVVILVVDARVGITASDEQIVRMLRRV 182 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ KID LE Y + + + P S + +G+ +LE Sbjct: 183 KKPIILMANKID-------DSHLEPEIYSL--WSLGMGQPFPVSGLHGRGLADALDELLE 233 Query: 209 TI 210 + Sbjct: 234 VM 235 Score = 98.3 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 11/185 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 GP +A GR NVGKSSL+N L + A ++ G T+ ++ Sbjct: 247 PGGPRRVALIGRPNVGKSSLLNKLAGSER-AVVNDLAGTTRDPI------DEVIELGGYP 299 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + K + + L + ERS +L+D + + D + Sbjct: 300 WRFIDTAGIRRRQHMAKGAEFYSSLRTQTALERSE--VAVVLLDVSEPLSEQDVRIIQTT 357 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K D L ++ LE+ + P V S+ + L A Sbjct: 358 IDSGRAMVLAFNKWDTL-DEERRDMLEREIDRDLAHVKWAPRV-NISAKTGWHKDKLVPA 415 Query: 206 ILETI 210 + ++ Sbjct: 416 LERSL 420 >gi|116075028|ref|ZP_01472288.1| GTP-binding protein EngA [Synechococcus sp. RS9916] gi|116067225|gb|EAU72979.1| GTP-binding protein EngA [Synechococcus sp. RS9916] Length = 455 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 16/189 (8%) Query: 21 IGLLPK-------AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP P ++A GR NVGKSSL+N + + A S G T+ Sbjct: 162 LTFLPPKDEEGEGDEPIQMAIVGRPNVGKSSLLNAICGEQR-AIVSPIRGTTRDTI---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +N++ LVD G R+ + +G I R L+ID G Sbjct: 217 --DTNIERQGMPWKLVDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDVCVLVIDALDG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + DQ + ++ + + +V+ K D + + + + + Y ++ TS+ Sbjct: 273 VTEQDQRLAGRIEDEGRACVVVVNKWDAVEKDSHTMPAMEKELRAKLYFLDWAPMLFTSA 332 Query: 194 VKRKGIEVL 202 + + ++ + Sbjct: 333 LTGQRVDSI 341 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L R A + PG T+ + + + + Sbjct: 3 RPVVAIIGRPNVGKSTLVNRLC-RSREAIVHDEPGVTRD------RTYQDGYWGDREFKV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + + +++D + G+ D+ + +L + Sbjct: 56 VDTGGLVF----DDDSEFLPEIREQANLAMAEACVALVIVDGQQGMTAADESIAEWLRSQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K + + + E P S++ G L +L Sbjct: 112 NCPTLLAVNKC--------ESPDQGLAMAAEFWSLGLGEPHPISAIHGAGTGDLLDQVLT 163 Query: 209 TI 210 + Sbjct: 164 FL 165 >gi|117926861|ref|YP_867478.1| small GTP-binding protein [Magnetococcus sp. MC-1] gi|117610617|gb|ABK46072.1| small GTP-binding protein [Magnetococcus sp. MC-1] Length = 495 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 61/182 (33%), Gaps = 21/182 (11%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 + P +A GR NVGKS+L N L ++ A + PG T+ + + +K Sbjct: 14 SKLPLVALVGRPNVGKSTLFNRLTRTRD-ALVDDTPGLTRDRQYGI------MKRGDTPF 66 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VD G+ G I + ++D G D + S L Sbjct: 67 PMVDTGGFEADPGETMVSLIRGQTI----LAIEEADIIVFVVDGSTGPLTDDYAIASHLR 122 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I K +K + I + +IP SS GI L + + Sbjct: 123 SSGKPVIIAANKSEK----------KAATASIEFHELGMEPIIPISSAHGLGIGDLLETL 172 Query: 207 LE 208 E Sbjct: 173 EE 174 Score = 94.8 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 45/188 (23%), Positives = 71/188 (37%), Gaps = 13/188 (6%) Query: 19 PEIGLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE+ P+ P +A G N GKSSL+N LV + L S G T+ D Sbjct: 200 PEVAREPRFKGPLRLAVVGCPNAGKSSLVNRLVGEERL-LASEIAGTTRDSI-----DVP 253 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N + LVD G V+ + ++ L L++D + GV Sbjct: 254 ITDANGETVILVDTAGIRRKSRVSLRVEKFA--VIAALKSMERAEVAILVLDAQRGVTDQ 311 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVK 195 D+ + S+ + K D + P Q+T+ + + + H VI S+ Sbjct: 312 DKRIGSYALDAGCGLIFAVNKWDTMPPG--QQTIRSFQEGLAIHFPRLTHCPVIFLSAKS 369 Query: 196 RKGIEVLR 203 K +E L Sbjct: 370 GKRVEKLL 377 >gi|269837313|ref|YP_003319541.1| small GTP-binding protein [Sphaerobacter thermophilus DSM 20745] gi|269786576|gb|ACZ38719.1| small GTP-binding protein [Sphaerobacter thermophilus DSM 20745] Length = 445 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 73/190 (38%), Gaps = 19/190 (10%) Query: 21 IGLLPKAG------PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 I LP+ P IA GR NVGKS+L+N L+ + S+ PG T+ Sbjct: 167 IAHLPETTEAEREEVPSIAIVGRPNVGKSALLNALLGQSRQ-IVSSIPGTTRDAV----- 220 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + + LVD G ++ ++ + L ER+ L+ID Sbjct: 221 -DTEITWAGNRVVLVDTAGIRRPGRIERGIEKYSVLRSTRAVERAD--VAVLVIDATEPF 277 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTS 192 DQ + + + + + K D + T+++ R + ++ ++ S Sbjct: 278 TAQDQAIAGAIAEAKKGIIVAVNKWDLVEKD--HRTMKEFTEKAREAFHFISYAPIVFIS 335 Query: 193 SVKRKGIEVL 202 ++ + + + Sbjct: 336 ALTGQRVNQV 345 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 18/184 (9%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR N GKS+L N LV + A + PG T+ + + + Sbjct: 3 RPLVAIVGRPNTGKSTLFNRLVGERR-AIVEDLPGTTRDRIY------AEASWGGVTFDV 55 Query: 89 VDMPGY--GYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G + + + ++D + GV D +V + Sbjct: 56 VDTGGLLSEQEIERASAAEIAQATQEQAELAIEQADVIVFMVDGQAGVTAGDHEVADLIR 115 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K E + Y + P S++ G+ L AI Sbjct: 116 RAKRPVLLAVNKA---------EARNIQDAAVEFYELGLGDPYPISALHGTGVGDLLDAI 166 Query: 207 LETI 210 + + Sbjct: 167 IAHL 170 >gi|117619280|ref|YP_855344.1| GTP-binding protein Era [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560687|gb|ABK37635.1| GTP-binding protein Era [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 299 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 16/173 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H + + VD Sbjct: 10 VAIVGRPNVGKSTLLNKLLGQK-VSITSKKPQTTRHRILGIDTE------ENYQTIYVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG ++ + S + V ++D H + D+ V L Sbjct: 63 PGLHI----EEKRAINRLMNRAATSSLGDVAMVVFMVDGTH-WTKDDEMVLGKLRHLKCP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + KID + ++ L ++L + AH ++P S+ K +E +R+ Sbjct: 118 VVLAVNKIDNVK--EKEDLLPHLEWLGQQMNFAH--ILPISAEKGTNVEKIRE 166 >gi|158320432|ref|YP_001512939.1| small GTP-binding protein [Alkaliphilus oremlandii OhILAs] gi|166920096|sp|A8MH56|DER_ALKOO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|158140631|gb|ABW18943.1| small GTP-binding protein [Alkaliphilus oremlandii OhILAs] Length = 440 Score = 114 bits (286), Expect = 7e-24, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++A G+ NVGKSSLIN ++ + + S+ G T+ + + Sbjct: 173 DDDVIKVAMIGKPNVGKSSLINRILGEERV-IVSDIAGTTRDAI------DTPFTDGDDR 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++++ + IVR ++ L+ID GV + D+ + + Sbjct: 226 YVLIDTAGIRRKSRITESIEKYS--IVRAIAAVEKSDVCLLVIDASEGVTEQDKKIAGYS 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + T+ + IRN T ++ ++ S++ + + + Sbjct: 284 HENGKGMVIVVNKWDIIEKD--NHTMNEFIKEIRNELTYISYAPIVFVSALTGQRMNKIL 341 Query: 204 KAI 206 + + Sbjct: 342 EEV 344 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 20/183 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N + + ++ N PG T+ + + + L Sbjct: 3 RPIVAVVGRPNVGKSTLFNKIAGER-ISIVENKPGVTRDRIY------AEAEWLNYQFTL 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G P+ + + T + ++D R G+ +D+DV L K Sbjct: 56 IDTGGI----EPESEEIIPAQMRRQAELAMETANVIIFVVDGREGLTSVDRDVAELLRKT 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + L K+D T ++++ Y + I S+ GI L +++ Sbjct: 112 KKPVIVTLNKVD---------TRHQSEHFYEFYELGMGDPIEISASLGLGIGDLLDEVVK 162 Query: 209 TIN 211 N Sbjct: 163 NFN 165 >gi|326797802|ref|YP_004315621.1| GTP-binding protein engA [Sphingobacterium sp. 21] gi|326548566|gb|ADZ76951.1| GTP-binding protein engA [Sphingobacterium sp. 21] Length = 433 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 13/176 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P+ A GR NVGKSS IN L+ ++ + G T+ F Sbjct: 170 EGSLPKYAIVGRPNVGKSSFINALIGKERN-IVTPIAGTTRDSIQIHYNQFG------HE 222 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+N++ + + R + V L+ID G++ D ++F Sbjct: 223 FMLIDTAGLRRKTKVKENIEFYSVM--RTIKALEEADVVILMIDATEGLESQDVNIFHLA 280 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 +K +++ K D + +TL++ + IRN P ++ TS ++++ I Sbjct: 281 EKNKKGVVLLVNKWDLVDKD--HKTLKRFEEEIRNKTAPFTDYPIVFTSVIEKQRI 334 Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N L + A + G T+ + + + ++D Sbjct: 5 IAIVGRPNVGKSTLYNRLTESRK-AIVDDMSGVTRD------RHYGQAEWVGKTFTVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 GY + + L + ++D G+ +D D+ L + Sbjct: 58 GGYVHGSEDIFEAAIREQV----LIAIEEASVILFMVDVTVGITDLDDDIAHLLRRSNKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K+D + Y E+ SS+ G L +++ + Sbjct: 114 VFVVVNKVD---------HHQLHTDASTFYALGLGEIYNISSMTGSGTGELLDEVVKHFD 164 >gi|223994975|ref|XP_002287171.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976287|gb|EED94614.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 460 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 5/182 (2%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA-LVD 90 +A GR NVGKSSLIN + A S+ G T+ + + S+ LP + VD Sbjct: 184 VAIIGRPNVGKSSLINTIFGSNR-AIVSDVAGTTRDSIDAIMERPSSDPEGLPTIYRFVD 242 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + + + ++ R L V L++D GV + D+ + + Sbjct: 243 TAGIRRKGKIEFGPEFF--MVNRALRAIRRADVVLLVLDATAGVTEQDRVLAQKISDDGR 300 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPTSSVKRKGIEVLRKAILET 209 + I+ K D + + + KY P ++ S+ + + + +A+ Sbjct: 301 ACVILCNKWDAVIDKDSSTYDQSVKYFREELPQIRWAPILFVSAATGQRVGKIYEAVDSA 360 Query: 210 IN 211 +N Sbjct: 361 VN 362 Score = 92.9 bits (230), Expect = 3e-17, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 71/192 (36%), Gaps = 35/192 (18%) Query: 30 PEIAFSGRSNVGKSSLINILVN-RKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L+N L + A ++ G T+ + + N + A L Sbjct: 1 PLIAVVGRPNVGKSALVNRLAGTQSGGAIVADEEGITRD------RTYRNAEFLGEAFQL 54 Query: 89 VDMPGYGY----ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G + A K+ + I V L++D + G +D+ + F Sbjct: 55 VDTGGLVFDDNDALFAKEIREQAMIAIEES-------AGVILVVDGQMGPTSMDEQLAIF 107 Query: 145 LDK---KAVSYQIVLTKI--DKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTSSVKRKG 198 L K K + + + K DK YL + E S++ G Sbjct: 108 LRKEVLKKMPVILAVNKCESDK-----------NGAYLASQFWNLGLGEPFAVSALHGVG 156 Query: 199 IEVLRKAILETI 210 + + + + I Sbjct: 157 TAEVMEKMFDDI 168 >gi|126657505|ref|ZP_01728661.1| tRNA modification GTPase [Cyanothece sp. CCY0110] gi|126621209|gb|EAZ91922.1| tRNA modification GTPase [Cyanothece sp. CCY0110] Length = 460 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 26/184 (14%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 ++A GR NVGKSSL+N +R + A ++ PG T+ + S L + Sbjct: 224 NGLKVAIVGRPNVGKSSLLNAW-SRSDRAIVTDLPGTTRDVV------ESQLVVGGIPIQ 276 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G V+ G + R S V L ID G D +++ + Sbjct: 277 VLDTAGIRQ---TTDQVEKIG--VERSRLAASQADLVLLTIDATVGWTVEDSEIYQPIRH 331 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +V+ KID +P + +P ++ TS+ +GIE L IL Sbjct: 332 --LPTILVINKIDLATPD------------LSQFPPEIKGIVKTSAANHQGIEALESTIL 377 Query: 208 ETIN 211 + IN Sbjct: 378 QGIN 381 >gi|229829020|ref|ZP_04455089.1| hypothetical protein GCWU000342_01105 [Shuttleworthia satelles DSM 14600] gi|229792183|gb|EEP28297.1| hypothetical protein GCWU000342_01105 [Shuttleworthia satelles DSM 14600] Length = 441 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 13/187 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P IA G+ NVGKSSLIN L ++ L S+ G T+ + ++ N Sbjct: 174 EDDTPRIAVVGKPNVGKSSLINRLCGKQRL-IVSDIAGTTRDAV------DTRVRFNKKD 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G + +++ + IVR ++ V L+ID GV + D + Sbjct: 227 YIFVDTAGLRRKSRIQGDIERYS--IVRAVAAVEKADVVVLVIDGAEGVSEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + I + K D + + +++ + + +I S++ + + L Sbjct: 285 HERGKAVIIAVNKWDAVEKDNHTMSDQIDRIHKTLS--FMLYARIIFISALTGQRLGQLY 342 Query: 204 KAILETI 210 +AI + I Sbjct: 343 EAIDQVI 349 Score = 94.8 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 61/176 (34%), Gaps = 19/176 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + ++ + PG T+ + +++ ++D Sbjct: 6 VAVVGRPNVGKSTLFNALAGER-ISIVEDTPGVTRDRIY------ADVSWLDHEFTMIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G P + + + T + + D R G+ D V L + Sbjct: 59 GGI----EPDSSDIILSQMREQAQIAIDTADVIIFMTDVRQGLVDADAKVADMLRRSKKP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D Y + P S+ + G + A++ Sbjct: 115 IVLVVNKVDDFDK--------HVMDSYEFYNLGIGDPHPISAAGKLGFGDMLDAVI 162 >gi|239827759|ref|YP_002950383.1| GTP-binding protein Era [Geobacillus sp. WCH70] gi|239808052|gb|ACS25117.1| GTP-binding protein Era [Geobacillus sp. WCH70] Length = 302 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+ +N ++ +K +A S+ P T++ V + + +D Sbjct: 11 VSIVGRPNVGKSTFLNRVIGQK-IAIMSDKPQTTRNKIQGVYT------TDDAQIIFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ L+ + + +I+ G + D + L Sbjct: 64 PGM---HKPKHKLGDF--MMKVALNALREVDLILFMINAEEGFGRGDAFIIEQLKAVNTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KIDK+ P +++ K L YP E+IP S+++ IE L + I + + Sbjct: 119 VFLVINKIDKVHPDDLLPLIDQYKDL---YP--FAEIIPISALQGNNIETLVEQIKKYL 172 >gi|308069928|ref|YP_003871533.1| GTP-binding protein [Paenibacillus polymyxa E681] gi|305859207|gb|ADM70995.1| GTP-binding protein, era-like (Bex protein) [Paenibacillus polymyxa E681] Length = 300 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ V + +D Sbjct: 11 VAIVGRPNVGKSTLMNHVIGQK-IAIMSDKPQTTRNKIHGV------FTTEDTQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG K+ + + + V LID G+ D+ + L + Sbjct: 64 PGIH-----KRQSKLGDYMNQTAFNTLGEVEAVLFLIDAAEGLGGGDRFIAEQLKQVKTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID++ P +E+ + L E+IP S+ + L + + + + Sbjct: 119 VILVLNKIDRIEPEALLPLIEQYRKL-----YDFAEIIPISAKMGNNVNTLLEQVQKYL 172 >gi|163813998|ref|ZP_02205391.1| hypothetical protein COPEUT_00150 [Coprococcus eutactus ATCC 27759] gi|158450692|gb|EDP27687.1| hypothetical protein COPEUT_00150 [Coprococcus eutactus ATCC 27759] Length = 445 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 75/187 (40%), Gaps = 13/187 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P IA G+ NVGKSS+IN L+ + S+ G T+ + + N Sbjct: 179 EDERPRIAIIGKPNVGKSSIINKLLGEDRV-IVSDIAGTTRDAI------DTEVVRNGRE 231 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K++++ + I+R +S L+ID G+ D + Sbjct: 232 YVFIDTAGLRKKSKIKEDIERYS--IIRTVSAVERCNVAVLVIDATEGITDQDAKIAGIA 289 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 ++ I + K D + +T+ K IRN + P E++ S+ + + L Sbjct: 290 HERGKGMIIAVNKWDAIEKND--KTIYKFTEEIRNKLSYMPYAELLFISAETGQRLPKLF 347 Query: 204 KAILETI 210 + I I Sbjct: 348 ETIDAVI 354 Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 65/186 (34%), Gaps = 19/186 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A GR NVGKS+L N+L K ++ + PG T+ + +++ Sbjct: 5 DMSKPIVAIVGRPNVGKSTLFNVLAGEK-ISIVQDTPGVTRDRIY------ADINWLDYN 57 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G P+ + + + T + + D R G+ D V L Sbjct: 58 FTLIDTGGI----EPETDNIILKSMREQAEIAIETADVIIFMTDVRQGMVDDDSKVADML 113 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V+ K+D + Y + P S R GI + Sbjct: 114 RRSKKPIVLVVNKVDSFEK--------FMPDVYEFYNLGLGDPHPISGSSRLGIGDMLDE 165 Query: 206 ILETIN 211 ++ + Sbjct: 166 VVSHFD 171 >gi|119476373|ref|ZP_01616724.1| predicted GTPase [marine gamma proteobacterium HTCC2143] gi|119450237|gb|EAW31472.1| predicted GTPase [marine gamma proteobacterium HTCC2143] Length = 466 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + + PG T+ + + + L+D Sbjct: 179 KIAIIGRPNVGKSTLVNRLLGEERV-IVFDHPGTTRDSIYI------DYEREGQPYTLID 231 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ V+ + IV+ L V L++D G+ D + Sbjct: 232 TAGVRRRKNVRETVEKFS--IVKALKAIDDANVVVLVMDAAEGLVDQDLHLLGHAIDAGR 289 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + I L K D L +T K + R E+ S++ G+ L +++ + Sbjct: 290 ALVIALNKWDGLD--IDHKTWVKRELERRLQFIDFAEIHFISALHGTGVGHLYESVDKA 346 Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 64/179 (35%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A +N PG T+ + + + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLTKTRD-ALVANLPGLTRDRKY------GEARVGSRRFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ V+ L D R G+ D + + L + Sbjct: 55 IDTGGITGEEEGIDVAMAQQSML-----AVDEADAVFFLCDSRAGLTAGDHALANKLRQS 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + KID + P A + Y ++ P ++ KG+ L +L Sbjct: 110 DKPVYYIANKIDGVDPNVA---------MADFYQLGIEKLYPMTATHGKGVRNLLDDML 159 >gi|291543597|emb|CBL16706.1| ribosome-associated GTPase EngA [Ruminococcus sp. 18P13] Length = 442 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 63/182 (34%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L+ ++ L+ + PG T+ + S + + Sbjct: 3 LPIVAVVGRPNVGKSTLFNKLIGQR-LSIVEDTPGVTRDRIY------SKCEWRGREFMV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G P + + + + L+ D R GV D V L K Sbjct: 56 VDTGGI----EPDTDDVILAQMRRQAEVAIHRADVIVLVTDVRCGVTANDYAVADMLQKS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K D + L Y E P SS G + IL+ Sbjct: 112 GKPVVLAVNKCDTIGEPPL--------ELYEFYNLGIGEPFPISSQHGHGTGDMLDEILK 163 Query: 209 TI 210 + Sbjct: 164 YL 165 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 71/183 (38%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++A G+ N GKSSLIN + + + S+ G T+ + ++N Sbjct: 174 DEDCIKVAVIGKPNAGKSSLINKIAGEERV-IVSDIAGTTRD------ATDTVVENEQGK 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + V+ + L +R+ ++ID + G + D V + Sbjct: 227 FVFIDTAGIRKKSRITERVEHFSVLRAYMAVDRAD--VCIIMIDAQTGFTEQDSKVAGYA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLR 203 ++ + I + K D + T T+++ + + ++ + S+ + + L Sbjct: 285 HEQGKASIIAVNKWDLIEKDT--NTMKEFQEKLEKDFSFMSYVPFVFISAKTGQRVNKLF 342 Query: 204 KAI 206 + I Sbjct: 343 EMI 345 >gi|119508848|ref|ZP_01628000.1| tRNA modification GTPase [Nodularia spumigena CCY9414] gi|119466377|gb|EAW47262.1| tRNA modification GTPase [Nodularia spumigena CCY9414] Length = 463 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 23/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N ++ + A ++ PG T+ + S L + ++D Sbjct: 227 KVAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDVV------ESQLVVGGIPVQVLD 279 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G + R + V L ID G + DQ+++ + + Sbjct: 280 TAGI---RETVDQVEKIG--VERSRRAANAADLVLLTIDASAGWTESDQEIYDQVQHR-- 332 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + + YP +++ T + K +GI+ L AIL + Sbjct: 333 PLILVINKIDLVETASIDS---------GKYPHNIHQIVTTIAAKNQGIDALETAILNIV 383 >gi|291484708|dbj|BAI85783.1| GTP-binding protein EngA [Bacillus subtilis subsp. natto BEST195] Length = 436 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 17/198 (8%) Query: 18 VPEIGLLPKAGPPE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +P+ E GR NVGKSSL+N ++ + + SN G T+ Sbjct: 160 AEHFKNIPETKYNEEVVQFCLIGRPNVGKSSLVNAMLGEERV-IVSNVAGTTRDAV---- 214 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ N +VD G + + + L +RS + V L D G Sbjct: 215 --DTSFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVL--DGEEG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPT 191 + + D+ + + + + IV+ K D + + T+++ + IR++ + ++ Sbjct: 271 IIEQDKRIAGYAHEAGKAVVIVVNKWDAVDKDES--TMKEFEENIRDHFQFLDYAPILFM 328 Query: 192 SSVKRKGIEVLRKAILET 209 S++ +K I L AI++ Sbjct: 329 SALTKKRIHTLMPAIIKA 346 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 21/182 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS++ N + + ++ + PG T+ + ++ N NL Sbjct: 2 GKPVVAIVGRPNVGKSTIFNRIAGER-ISIVEDTPGVTRDRI-YSSAEWLNYDFNLIDTG 59 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D+ + ++ + + +++ R GV D++V L + Sbjct: 60 GIDIGDEPFLAQIRQQAEI----------AMDEADVIIFMVNGREGVTAADEEVAKILYR 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D E + Y E P S G+ L A+ Sbjct: 110 TKKPVVLAVNKLD---------NTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVA 160 Query: 208 ET 209 E Sbjct: 161 EH 162 >gi|40062766|gb|AAR37660.1| GTP-binding protein, Era/TrmE family [uncultured marine bacterium 439] Length = 463 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 13/182 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKN-LARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +A GR NVGKS+LIN ++ + LA + PG T+ F L+D Sbjct: 179 VAVLGRPNVGKSTLINRILGEERVLAI--DIPGTTRDTIFI------PFTREGEQYTLID 230 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R+ ++ V+ + I++ + V L++D GV + D + + K Sbjct: 231 TAGIRRKRSVEEKVEKFS--IIKAIEALEDSHVVILVLDAHEGVTEQDATLLGMIADKGR 288 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + IV+ K D L E K K ++ ++ V S++ G+ L I ++ Sbjct: 289 ALLIVINKWDGLDDYQKSEV--KRKLDVKLSFISYASVHYISALHGSGVGKLFTHIRKSF 346 Query: 211 NY 212 + Sbjct: 347 EH 348 Score = 81.7 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 21/173 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I+ GR NVGKS+L N L N + A S+ G T+ + + ++ +++ Sbjct: 4 PVISLVGRPNVGKSTLFNRLSNSRQ-ALVSDFEGLTRDRQYATVQ-----LDDETMCSII 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + ++ G + LS ++ ++ + GV +D D+ S L K Sbjct: 58 DTGGL----TNEDSLIDTGIH-EQVLSALDESDVIFFIVSNKDGVTSLDLDISSQLRKLK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V K + L+ TA E + E + S+ +GI L Sbjct: 113 KNIILVCNKAEGLNQVTAAE----------FFELGLGEPVLISAEHNQGISEL 155 >gi|220904745|ref|YP_002480057.1| GTP-binding protein EngA [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869044|gb|ACL49379.1| small GTP-binding protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 454 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 11/179 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P +A GR N GKSSLIN L + + S+ G T+ D +N Sbjct: 186 PAPPALRLAMLGRPNAGKSSLINALSGEERM-IVSDVAGTTRD-----SVDVRFCRNGK- 238 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G +V+ + + + + L +D GV Q D+ + Sbjct: 239 DYVFVDTAGVRRRTKITDSVEKYS--VNSAIKSSTKADVTLLTLDAAEGVSQQDKRLMDM 296 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L+ + + +++ K D + + ++ P H V+P S++ K +E + Sbjct: 297 LNTRKTPFMVLINKCDLAPRNALDQLKKNISQMLAFCP--HVPVMPVSALTGKDLEKIL 353 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 74/190 (38%), Gaps = 21/190 (11%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I GR NVGKS+L N L+ R N A T + PG T+ V + + LPA Sbjct: 3 ETLPRIILVGRPNVGKSTLFNRLI-RSNRAITHDRPGVTRDRMEGVVR-----RKGLPAF 56 Query: 87 ALVDMPGYGYAR------APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +VD G P+ ++ + + V ++D R G+ +D+ Sbjct: 57 GIVDTGGITLDAHAMVVEGPEGIRGFEQDILDQTEAAMKDAAAVAFVVDGRDGLLPLDEH 116 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + + +K + V+ K+D E+ + + ++ S+ I Sbjct: 117 LAAHVRRKGLPTICVVNKVD---------GAEREDEQLAEFHILGFPLLAVSAEHGHNIR 167 Query: 201 VLRKAILETI 210 L + + + + Sbjct: 168 ALVEDLADLL 177 >gi|167527203|ref|XP_001747934.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773683|gb|EDQ87321.1| predicted protein [Monosiga brevicollis MX1] Length = 307 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 13/129 (10%) Query: 3 SHTIFTKSAWIFLRGVPE-IGLLPKAGPP--EIAFSGRSNVGKSSLINILVNRKNLARTS 59 + F FL LP + P E+AF+GRSNVGKS+LIN+L + + AR+ Sbjct: 157 AEQFFRSRRLNFLGAATTPASFLPASDKPVFEVAFAGRSNVGKSTLINLLT-KSSPARSR 215 Query: 60 NAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERS 119 N PG TQ +NF+ D +VD PGYG+A A + W I YL +R+ Sbjct: 216 NKPGVTQSINFYRVTD---------QARVVDFPGYGFAFANEAKQSLWQDAIRAYLQDRT 266 Query: 120 TLRCVYLLI 128 L VYL++ Sbjct: 267 ELELVYLVL 275 >gi|156741277|ref|YP_001431406.1| GTP-binding protein Era [Roseiflexus castenholzii DSM 13941] gi|156232605|gb|ABU57388.1| GTP-binding protein Era [Roseiflexus castenholzii DSM 13941] Length = 449 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 30/198 (15%) Query: 24 LPKAG---PPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 LP A PE +A GR NVGKS+L+N L+ +K +A S P T+ + Sbjct: 146 LPPATRPVLPEGPHRSGFVALVGRPNVGKSTLLNALLGQK-VAIVSPKPQTTRTAIRGI- 203 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG-LIVRYLSERSTLRCVYLLIDCRH 132 L + VD PG + + G ++ + V +++D Sbjct: 204 -----LTRPDAQIVFVDTPGI------HEPRNRLGAYMVKQARRAIPDADVVCMVVDITR 252 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 +D+ + + + K + +VL KID L + L+ + + + + S Sbjct: 253 PPGSLDERIAALVRKASARRILVLNKID-LRTKRGSDNLQAYR-ALAPWDME----VAVS 306 Query: 193 SVKRKGIEVLRKAILETI 210 +++ G++ L I+ + Sbjct: 307 ALRGHGLDALVDEIVRLL 324 >gi|118443488|ref|YP_878327.1| GTP-binding protein EngA [Clostridium novyi NT] gi|166224330|sp|A0Q125|DER_CLONN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|118133944|gb|ABK60988.1| GTP-binding protein engA [Clostridium novyi NT] Length = 438 Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 20/192 (10%) Query: 21 IGLLPKAGP-------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 I P+ IA GR NVGKSSLIN ++ + SN PG T+ Sbjct: 161 IEKFPEGNVEEEEDEYIRIAMIGRPNVGKSSLINKILGEEK-HIVSNIPGTTRDAV---- 215 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 S ++ L+D G K+ V+ + VR L+ L+ID Sbjct: 216 --DSYVETEEGKFVLIDTAGLRRKSKIKEQVERYSA--VRTLASIENADVCILMIDATED 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPT 191 + + D+ + + + + +++ K D + +T++ K +R + P + Sbjct: 272 IAEQDERIIGYAHEINKAILVIVNKWDLIEKDD--KTMKNFKDKLRTKLSFLPYASFLFI 329 Query: 192 SSVKRKGIEVLR 203 S+ + + + Sbjct: 330 SAKTGQRVHKVL 341 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 20/182 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L N L K +A + PG T+ + + +N Sbjct: 2 GKPIVAIVGRPNVGKSTLFNKLAG-KRIAIVDDMPGVTRDRIYAEAEWLNN------NFT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G P+ + + + V ++D + G+ D++V L K Sbjct: 55 IIDTGGI----EPENDDIIVAQMRRQAQLAIEMADVVLFIVDGKQGLTDADREVAHMLRK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + S + + KID + L+ Y N P +P S+ + G+ L ++ Sbjct: 111 ASKSIVLAVNKID-------RRQLDDNIYEFYNLGLGDP--MPISASQGLGLGDLLDEVI 161 Query: 208 ET 209 E Sbjct: 162 EK 163 >gi|304317178|ref|YP_003852323.1| ribosome-associated GTPase EngA [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778680|gb|ADL69239.1| ribosome-associated GTPase EngA [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 439 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 72/181 (39%), Gaps = 19/181 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N + ++ ++ + PG T+ ++ + LV Sbjct: 4 PMVGIVGRPNVGKSTLFNKITGQR-ISIVEDKPGVTRDRIYY------ETEWLGRKFILV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + ++ + T+ + +ID + G+ +D+D+ + L K Sbjct: 57 DTGGL----EPDSEDEFFSKIRMQVEAALKTVDLILFVIDAKDGLSPVDEDIANMLRKSH 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +VL K+D E + E I S+ GI L +++ Sbjct: 113 KKVILVLNKVDSFK--------EMPISYYDSMRLGFGEPIAISASNGLGIGELLDEVIKN 164 Query: 210 I 210 I Sbjct: 165 I 165 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 15/184 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLP 84 +I F G+ NVGKSSL+N ++ + A S+ PG T+ L+ + KD Sbjct: 173 DEETIKICFIGKPNVGKSSLVNKILGEER-AIVSDIPGTTRDALDTYFEKDNK------- 224 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 ++D G + ++ + L +RS + L+ID G + D + + Sbjct: 225 KYVIIDTAGMRKKGRIEDKIERYSVLRALSAIDRSDI--CILVIDATEGPTEQDTKIAGY 282 Query: 145 LDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++ + I + K D + T E L+ K + + I S+ + + L Sbjct: 283 AFEQNKAIIIAVNKWDLIEKDNNTVNEYLKLIKE--KFSFMSFASTIFISAKTGQRLNKL 340 Query: 203 RKAI 206 + I Sbjct: 341 FEEI 344 >gi|145300360|ref|YP_001143201.1| GTP-binding protein Era [Aeromonas salmonicida subsp. salmonicida A449] gi|142853132|gb|ABO91453.1| GTP-binding protein Era [Aeromonas salmonicida subsp. salmonicida A449] Length = 299 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 18/174 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H + + + VD Sbjct: 10 VAIVGRPNVGKSTLLNKLLGQK-VSITSKKPQTTRHRILGIDTE------DNHQTIYVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG ++ + S + V ++D H + D+ V L Sbjct: 63 PGLHI----EEKRAINRLMNRAATSSLGDVAMVVFVVDGTH-WTKDDEMVLGKLRHLPCP 117 Query: 152 YQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + KID + LE ++ ++P S+ K +E +R+ Sbjct: 118 VVLAVNKIDNVKDKEDLLPHLEWLGQQMK-----FSHILPISAEKGTNVEKIRE 166 >gi|57641889|ref|YP_184367.1| GTP-binding protein [Thermococcus kodakarensis KOD1] gi|57160213|dbj|BAD86143.1| probable GTP-binding protein [Thermococcus kodakarensis KOD1] Length = 183 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 26/191 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F+GRSNVGKS+LI L +K + PG T+ ++ +VD+ Sbjct: 2 IIFAGRSNVGKSTLIFQLTGKK--VKRGKRPGVTR----------RPIEIEWRGKRVVDL 49 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-----------HGVKQID 138 PG+G+ PK+ + IV ++ + + + L++D + G ID Sbjct: 50 PGFGFMSGLPKEVQERIKDEIVHFIEDNADRIELAVLVVDGKAAPEIIERWEKRGEIPID 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + FL + + + + KIDK+ A K+ + Y + +P S+ K Sbjct: 110 VEFYQFLRELEIPTIVAVNKIDKVKNVGAVINFLAEKFGV-PYGEVNETFVPISAKFGKN 168 Query: 199 IEVLRKAILET 209 ++ L+ + + Sbjct: 169 LDALKALMEKK 179 >gi|150018074|ref|YP_001310328.1| small GTP-binding protein [Clostridium beijerinckii NCIMB 8052] gi|149904539|gb|ABR35372.1| small GTP-binding protein [Clostridium beijerinckii NCIMB 8052] Length = 412 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 75/191 (39%), Gaps = 20/191 (10%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P IA G +N GKSS+IN L N++ ++ S+ G T + + Sbjct: 2 SLNTTPSGERVHIALFGMTNAGKSSIINALTNQE-ISIVSDVKGTTTDPVY-----KAIE 55 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + ++D G ++ + + S +++D GV + D+ Sbjct: 56 ILPIGPCMIIDTAGLDDESELGESRKK------KTIEVLSKTDVALVVVDATVGVTENDR 109 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + +K + + K DK +E L + + I V+ S++ + GI Sbjct: 110 SIIDQIKEKKIPTICIFNKADK--KNIEKEELAEIEKTIGTT------VVSVSALNKNGI 161 Query: 200 EVLRKAILETI 210 + L++ I+ I Sbjct: 162 DELKQKIISVI 172 >gi|315038512|ref|YP_004032080.1| GTP-binding protein Era [Lactobacillus amylovorus GRL 1112] gi|312276645|gb|ADQ59285.1| GTP-binding protein Era [Lactobacillus amylovorus GRL 1112] Length = 301 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SDDMQIVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + LS + + V +++ + + DQ + L + V Sbjct: 64 PGI---FKPHSKLDDYMD--KASLSSLNDVDLVLFMVEP-EKIGKGDQYIADLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ P ++ L E++P S+ + GIE L + + + Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----EGFKEILPISATQGIGIEDLLATLNKYL 171 >gi|209695942|ref|YP_002263872.1| GTP-binding protein Era [Aliivibrio salmonicida LFI1238] gi|208009895|emb|CAQ80208.1| GTP-binding protein era [Aliivibrio salmonicida LFI1238] Length = 321 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V + +D Sbjct: 30 IAIVGRPNVGKSTLLNQILGQK-ISITSRKPQTTRHRIMGVDTE------GDYQAIYIDT 82 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V L+D H D+ V + L K Sbjct: 83 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVLFLVDGTH-WTPDDEMVLNKLRKAGF 136 Query: 151 SYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +++ K+D + L+ + +V+P S+ ++V++K + + Sbjct: 137 PTVLLVNKVDNVKDKNDVMAHLQTMTEKM-----DFVDVVPISAKSGSNVDVVQKLVRDH 191 Query: 210 I 210 + Sbjct: 192 L 192 >gi|313904194|ref|ZP_07837573.1| ribosome-associated GTPase EngA [Eubacterium cellulosolvens 6] gi|313470996|gb|EFR66319.1| ribosome-associated GTPase EngA [Eubacterium cellulosolvens 6] Length = 443 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 9/185 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P+IA G+ NVGKSS+IN L+ + S+ G T+ + +K N Sbjct: 174 EDDNPKIAIVGKPNVGKSSIINKLLGTNRV-IVSDIAGTTRDAI------DTVIKRNGKD 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + IVR ++ ++ID G+ + D + Sbjct: 227 YTFIDTAGLRRKSKIKEELERYS--IVRTVAAVERCDIAVVVIDAVEGITEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + K + E+I S+ + + L Sbjct: 285 HDRGKGLIIAVNKWDAIEKDDKTQKKFSEKVKATLSFADYAEIIYISAATGQRLPKLFDT 344 Query: 206 ILETI 210 I + + Sbjct: 345 IEQVL 349 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + ++ + PG T+ + +++ ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGER-ISIVKDTPGVTRDRIY------ADVTWLNHEFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + + T + + D R G+ D V + L K Sbjct: 57 DTGGI----EPDSSDIILKQMREQAVIAMETADVIIFITDVRQGLVDADLQVATMLRKSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D + Y E S+ + G+ L ++ Sbjct: 113 KPVVLAVNKVDDFKTQEI--------GIYEFYNLGIGEPHAISAEGKMGLGDLLDVVI 162 >gi|16079341|ref|NP_390165.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. 168] gi|221310200|ref|ZP_03592047.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. 168] gi|221314523|ref|ZP_03596328.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319445|ref|ZP_03600739.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. JH642] gi|221323721|ref|ZP_03605015.1| GTP-binding protein EngA [Bacillus subtilis subsp. subtilis str. SMY] gi|321311754|ref|YP_004204041.1| GTP-binding protein Der [Bacillus subtilis BSn5] gi|1730915|sp|P50743|DER_BACSU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|1146219|gb|AAC83966.1| similar to Escherichia coli GTP-binding protein Era; putative [Bacillus subtilis subsp. subtilis str. 168] gi|2634702|emb|CAB14200.1| GTPase essential for ribosome 50S subunit assembly [Bacillus subtilis subsp. subtilis str. 168] gi|320018028|gb|ADV93014.1| GTP-binding protein Der [Bacillus subtilis BSn5] Length = 436 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 17/198 (8%) Query: 18 VPEIGLLPKAGPPE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +P+ E GR NVGKSSL+N ++ + + SN G T+ Sbjct: 160 AEHFKNIPETKYNEEVIQFCLIGRPNVGKSSLVNAMLGEERV-IVSNVAGTTRDAV---- 214 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ N +VD G + + + L +RS + V L D G Sbjct: 215 --DTSFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVL--DGEEG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPT 191 + + D+ + + + + IV+ K D + + T+++ + IR++ + ++ Sbjct: 271 IIEQDKRIAGYAHEAGKAVVIVVNKWDAVDKDES--TMKEFEENIRDHFQFLDYAPILFM 328 Query: 192 SSVKRKGIEVLRKAILET 209 S++ +K I L AI++ Sbjct: 329 SALTKKRIHTLMPAIIKA 346 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 21/182 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS++ N + + ++ + PG T+ + ++ N NL Sbjct: 2 GKPVVAIVGRPNVGKSTIFNRIAGER-ISIVEDTPGVTRDRI-YSSAEWLNYDFNLIDTG 59 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D+ + ++ + + +++ R GV D++V L + Sbjct: 60 GIDIGDEPFLAQIRQQAEI----------AMDEADVIIFMVNGREGVTAADEEVAKILYR 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D E + Y E P S G+ L A+ Sbjct: 110 TKKPVVLAVNKLD---------NTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVA 160 Query: 208 ET 209 E Sbjct: 161 EH 162 >gi|121607080|ref|YP_994887.1| GTP-binding protein EngA [Verminephrobacter eiseniae EF01-2] gi|166225932|sp|A1WE12|DER_VEREI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|121551720|gb|ABM55869.1| small GTP-binding protein [Verminephrobacter eiseniae EF01-2] Length = 468 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A +GR NVGKS+LIN + + L + PG T+ + N LVD Sbjct: 201 LAVAGRPNVGKSTLINTWLGEERLV-AFDTPGTTRDAI------TVPFERNGQRFELVDT 253 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G V+ + +V+ L + V LL+D GV + D + ++ + + Sbjct: 254 AGLRRKGKVFAAVEKFS--VVKTLQAIESAHVVLLLLDASQGVTEQDAHIAGYILESGRA 311 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K D + Q L + R + S+ KR+G+ L AI++ Sbjct: 312 VVLAVNKWD--ATDDYQRQLLERSIETRLAFLKFASLHRISAKKRQGLGPLWTAIVQA 367 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 62/182 (34%), Gaps = 24/182 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N L ++ A ++ G T+ + + N K ++ Sbjct: 3 PVMALVGRANVGKSTLFNRLTRSRD-ALVADFAGLTRD------RHYGNGKQGRHEYIVI 55 Query: 90 DMPGYGY---ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + ++ I + R GV D D+ +L Sbjct: 56 DTGGFEPDVASGIYREMARQTQQAIAEADVVVFVVDV-------RAGVTAQDHDIAHYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K ++ Y V P S+ +GI L + Sbjct: 109 RAGKPCVLAANKA-------EGMQQDQGGKWAEFYELGLGTVHPVSAAHGQGIRSLVEMA 161 Query: 207 LE 208 LE Sbjct: 162 LE 163 >gi|332992293|gb|AEF02348.1| GTP-binding protein Der [Alteromonas sp. SN2] Length = 481 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 17/187 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + + PG T+ F ++ + Sbjct: 190 QEQPIKLAIVGKPNVGKSTLTNRILGEERVV-VFDLPGTTRDSVFI------PMERDERE 242 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G R + V+ + IV+ L V ++ID R G+ D + F+ Sbjct: 243 YILIDTAGVRKRRKVNEAVEKFS--IVKTLQAIDEANVVLMIIDAREGITDQDLSLLGFV 300 Query: 146 DKKAVSYQIVLTKIDKLS---PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 S I + K D LS + L++ R + S++ G+ L Sbjct: 301 LNSGRSLVIAVNKWDGLSTDIKNDIKRELDR-----RLGFIDFARLHFISAMHGTGVGNL 355 Query: 203 RKAILET 209 +++ E Sbjct: 356 FESVQEA 362 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L N ++ A ++ PG T+ + K + Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTNTRD-ALVADYPGLTRDRKY------GQAKFEQRQFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + L V LL+D R G+ DQ + + + Sbjct: 55 VDTGGI-----TGDEEGIDAEMAQQSLLAIEEADVVLLLVDARAGLLPADQGIADHIRRL 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V K+D + + Y V ++ +G+ L + Sbjct: 110 NKKVFVVANKVDGIDGDS---------ESADFYALGLGTVKQIAAAHGRGVSQLLQ 156 >gi|327403775|ref|YP_004344613.1| GTP-binding protein engA [Fluviicola taffensis DSM 16823] gi|327319283|gb|AEA43775.1| GTP-binding protein engA [Fluviicola taffensis DSM 16823] Length = 436 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 71/183 (38%), Gaps = 9/183 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A P IA G+ NVGKSS+IN + ++ G T+ K F Sbjct: 173 EANLPHIAVVGKPNVGKSSMINAFTGEERN-IVTDISGTTRDSIDTRYKAFG------FD 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++++ + L R + +ID G+++ D ++ + Sbjct: 226 FMLIDTAGIRKKAKVTEDIEYYSVL--RSVRTIENSDICIFMIDATEGIQKQDLTIYYMI 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K +++ K D + T + K P +I TS++ ++ I + Sbjct: 284 EKNHKGVVVLVNKWDLVEKDTMTAVEYEKKLREDLAPYNDVPIIFTSALTKQRIHKALEK 343 Query: 206 ILE 208 +E Sbjct: 344 AME 346 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 26/181 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N L N A G T+ + + N +++D Sbjct: 5 IAIVGRPNVGKSTLFNRLT-ESNHAIVKEISGVTRDRIY------GRGEWNGIPFSVIDT 57 Query: 92 PGYGYARA---PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 GY + I + ++D G+ +D+ V L K Sbjct: 58 GGYVRGSEDIFEGEIRKQVEIAIDE-------ANVILFVVDATTGIVDLDETVAKILRKS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ K+D ++ + EV S+ G + +++ Sbjct: 111 KKKVLVIANKVD---------NNDRVGMSAEFWSFGLGEVFDLSAANGSGTGEILDEVVK 161 Query: 209 T 209 Sbjct: 162 Y 162 >gi|289423889|ref|ZP_06425682.1| GTP-binding protein Era [Peptostreptococcus anaerobius 653-L] gi|289155666|gb|EFD04338.1| GTP-binding protein Era [Peptostreptococcus anaerobius 653-L] Length = 299 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 22/183 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N +V K +A S+ P T++ V D + +D Sbjct: 8 VSIVGRPNVGKSTLMNDMVGEK-IAIMSDKPQTTRNTIQAVYTD------EEAQIVFMDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + G ++V+ S+ + + ++D + + D + L K + Sbjct: 61 PGIHKPK------NKLGEMMVKSASDAFKNVDSIIFVVDDSRTIGKGDSLIIENLKKTST 114 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ KIDK+ E +IR Y E+IPTS++K I+ L K I Sbjct: 115 PVFLVINKIDKIDNK------EDLFEMIRMYDDLNVFKEIIPTSALKGSNIDSLIKVIKR 168 Query: 209 TIN 211 +N Sbjct: 169 NLN 171 >gi|311113301|ref|YP_003984523.1| ribosome-associated GTPase EngA [Rothia dentocariosa ATCC 17931] gi|310944795|gb|ADP41089.1| ribosome-associated GTPase EngA [Rothia dentocariosa ATCC 17931] Length = 529 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 23/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++IN ++ R+ A + PG T+ + + LV Sbjct: 76 PVVAIVGRPNVGKSTIINRILGRRE-AVVEDKPGVTRDRVSY------KAEWVGKRFTLV 128 Query: 90 DMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G+ AR V + V V L++D R G+ D+ + L + Sbjct: 129 DTGGWESDARGIDAQVADQAEIAV------EQADVVILVVDARVGITASDEQIVRMLRRV 182 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ KID LE Y + + + P S + +G+ +LE Sbjct: 183 KKPIILMANKID-------DSHLEPEIYSL--WSLGMGQPFPVSGLHGRGLADALDELLE 233 Query: 209 TI 210 + Sbjct: 234 VM 235 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 11/185 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 GP +A GR NVGKSSL+N L + A ++ G T+ + Sbjct: 247 PGGPRRVALIGRPNVGKSSLLNKLAGSER-AVVNDLAGTTRDPI------DEVIDLGGYP 299 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + K + + L + ERS +L+D + + D + Sbjct: 300 WRFIDTAGIRRRQHMAKGAEFYSSLRTQTALERSE--VAVVLLDVSEPLSEQDVRIIQTT 357 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K D L ++ LE+ + P V S+ + L A Sbjct: 358 IDSGRAMVLAFNKWDTL-DEERRDMLEREIDRDLAHVKWAPRV-NISAKTGWHKDKLVPA 415 Query: 206 ILETI 210 + ++ Sbjct: 416 LERSL 420 >gi|89075087|ref|ZP_01161528.1| GTP-binding protein Era [Photobacterium sp. SKA34] gi|90580326|ref|ZP_01236133.1| GTP-binding protein Era [Vibrio angustum S14] gi|89049174|gb|EAR54739.1| GTP-binding protein Era [Photobacterium sp. SKA34] gi|90438628|gb|EAS63812.1| GTP-binding protein Era [Vibrio angustum S14] Length = 301 Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N LV +K L+ TS P T+H V + VD Sbjct: 10 IAIVGRPNVGKSTLLNRLVGQK-LSITSRKPQTTRHRIMGVDT------RDGYQAVYVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S + + V L+D D+ V + L K + Sbjct: 63 PGLHI-----EEKRTINRLMNRAASSSLTDVELVLFLVDGTM-WTADDEMVLNKLAKSQL 116 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ K+D + E + L +VIP S+ I+ + K + + + Sbjct: 117 PTVLLVNKVDNVK--DKHELFPHLQELASK--MEFVDVIPVSAKHGTNIDAVEKIVRQHL 172 >gi|317968893|ref|ZP_07970283.1| GTP-binding protein Der [Synechococcus sp. CB0205] Length = 454 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 77/188 (40%), Gaps = 15/188 (7%) Query: 21 IGLLPKAG------PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + LP A P ++A GR NVGKSSL+N + K A S G T+ Sbjct: 162 VDHLPAAEELEGEEPIQMAIVGRPNVGKSSLLNAVCGEKR-AIVSPIRGTTRDTI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 ++++ L+D G R+ + +G I R L+ID GV Sbjct: 216 -DTSIEREGKPWKLLDTAGIRRRRSVNYGPEYFG--INRSFKAIERSDVCVLVIDALDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + DQ + ++++ + +V+ K D + + + + + Y ++ TS++ Sbjct: 273 TEQDQRLAGRIEEEGRACVVVVNKWDAIEKDSHTMPAMEKELRAKLYFLDWAPMLFTSAL 332 Query: 195 KRKGIEVL 202 + +E + Sbjct: 333 TGQRVESI 340 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 29/187 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L R A + PG T+ + + + + Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLC-RSREAIVHDEPGVTRDR-TYQQGYWRDRH-----FKV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFS 143 VD G + + + + E++ L ++ D + G+ D+ + Sbjct: 56 VDTGGLVFDDDSEFLPE---------IREQANLALSEASVAVVIADGQQGLTAADESIAE 106 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L V + + K + + E P S++ G L Sbjct: 107 WLRGHNVPVLLAVNKC--------ESPEAGLAMAAEFWSLGLGEPFPISAIHGAGTGDLL 158 Query: 204 KAILETI 210 +++ + Sbjct: 159 DRMVDHL 165 >gi|300726752|ref|ZP_07060182.1| ribosome-associated GTPase EngA [Prevotella bryantii B14] gi|299775865|gb|EFI72445.1| ribosome-associated GTPase EngA [Prevotella bryantii B14] Length = 437 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P A GR N GKSS+IN + + G T+ + F Sbjct: 172 EEDIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTKYDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEFYSVM--RSIRAIENSDVCILMLDATRGIEAQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 + S +V+ K D + +Q+ ++ + IR P +I S++ ++ I Sbjct: 283 QRNNKSLVVVVNKWDLV-EEKSQKVIDTFENAIRKRMAPFVDFPIIFASALTKQRI 337 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 60/179 (33%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N + A S+ G T+ + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRFT-QSRRAIVSDTAGTTRDRQYGKVS------WNGKDFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V L+D GV D DV L + + Sbjct: 58 GG----WVVKSDDIFEDAIRRQVLVATEEADLVLFLVDTETGVTDWDVDVAKILRRAKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y + + S+ G L ILE + Sbjct: 114 IILVANKVD---------NSGEYYEAAEFYKLGLGDPVCISAATGGGTGDLLDMILEKM 163 >gi|190574024|ref|YP_001971869.1| GTP-binding protein EngA [Stenotrophomonas maltophilia K279a] gi|229463762|sp|B2FNR1|DER_STRMK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|190011946|emb|CAQ45567.1| putative GTP-binding protein [Stenotrophomonas maltophilia K279a] Length = 465 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 76/182 (41%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCRLDEDNH-----FLV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ G + + + + ++D R G +D ++ ++L K Sbjct: 56 VDTGGI-----AGEDEGLAGATTRQARAAAAEADLILFVVDAREGTSALDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +++ KID + + + E++ S+ R+G++ L +++ Sbjct: 111 SRPTLLLINKIDGTDEDSVRSEFARY---------GFGEMLTVSAAHRQGLDDLLDEVIQ 161 Query: 209 TI 210 + Sbjct: 162 RL 163 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N ++ + + S+ PG T+ +L+ + Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERM-IASDVPGTTRDSI------AVDLERDGRE 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ + + L++D GV D V + Sbjct: 228 YRLIDTAGLRRRSRVDEVVEKFS--VVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAV 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D L+ ++ +T ++ E + S+ G+ L +A Sbjct: 286 LDAGRALVIAINKWDGLTEYQREQA--ETMLSLKLGFVPWAESVRISAKHGSGLRELFRA 343 Query: 206 I 206 + Sbjct: 344 V 344 >gi|327484952|gb|AEA79359.1| GTP-binding protein Era [Vibrio cholerae LMA3894-4] Length = 325 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V + VD Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETE------GKYQAIYVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V +++ H D+ VF+ L K Sbjct: 87 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVLFVVEGTH-WTADDEMVFNKLQKANF 140 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + P +++P S+ + K +VL+K + E + Sbjct: 141 PVVLCVNKVDQVK--DRNEVMLHMLELSKRMP--FVDIVPISAKQGKNTDVLKKHVREHL 196 >gi|310643039|ref|YP_003947797.1| gtp-binding protein era-like protein [Paenibacillus polymyxa SC2] gi|309247989|gb|ADO57556.1| GTP-binding protein era-like protein [Paenibacillus polymyxa SC2] Length = 300 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ V + +D Sbjct: 11 VAIVGRPNVGKSTLMNHVIGQK-IAIMSDKPQTTRNKIHGVYT------TEDTQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG K+ + + + V LID G+ D+ + L + Sbjct: 64 PGIH-----KRQSKLGDYMNQTAFNSLGEVEAVLFLIDAAEGLGGGDRFIAEQLKQVKTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID++ P +E+ + L E++P S+ + L + + + Sbjct: 119 VILVLNKIDRIEPEALLPLIEQYRKL-----YDFAEIVPISAKMGNNVNTLLDQVQKYL 172 >gi|125973539|ref|YP_001037449.1| small GTP-binding protein [Clostridium thermocellum ATCC 27405] gi|256003357|ref|ZP_05428348.1| small GTP-binding protein [Clostridium thermocellum DSM 2360] gi|281417743|ref|ZP_06248763.1| ribosome-associated GTPase EngA [Clostridium thermocellum JW20] gi|166224331|sp|A3DE77|DER_CLOTH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|125713764|gb|ABN52256.1| small GTP-binding protein [Clostridium thermocellum ATCC 27405] gi|255992647|gb|EEU02738.1| small GTP-binding protein [Clostridium thermocellum DSM 2360] gi|281409145|gb|EFB39403.1| ribosome-associated GTPase EngA [Clostridium thermocellum JW20] gi|316940220|gb|ADU74254.1| ribosome-associated GTPase EngA [Clostridium thermocellum DSM 1313] Length = 440 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 13/180 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 ++A G+ NVGKSSLIN ++ + + S+ PG T+ + ++N Sbjct: 177 VIKVAVVGKPNVGKSSLINRILGEERV-IVSDIPGTTRDAI------DTFVENEHGKFVF 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + I+R + +LID + GV + D + + ++ Sbjct: 230 IDTAGIRRQSKINEKIEKYS--IIRSWTAIERADVCLILIDAKEGVTEQDTKIAGYAHEQ 287 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAI 206 + IV+ K D + T TLE+ + + + VI S++ + ++ + I Sbjct: 288 GKASIIVVNKWDLIEKQT--GTLEEYRRTVHEKLGFMLYAPVIFISALTGQRVDRIYGLI 345 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+ N LV K ++ + PG T+ + + ++ L+ Sbjct: 4 PVVAVVGRPNVGKSTFFNYLVG-KRISIVEDTPGVTRDRIY------AEVEWRNKKFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K + + T + ++D + GV D++V + L K Sbjct: 57 DTGGIEPYSEDK----IMQQMKRQAEIAIETADIIIFMVDVKDGVTASDKEVATLLRKTK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+DK+ A Y E++ SS+ G+ L I + Sbjct: 113 KPVIVAVNKVDKIGELPAD--------FYEFYNLGFGELMAISSIHGLGMGDLLDEIFKY 164 >gi|229521287|ref|ZP_04410707.1| GTP-binding protein Era [Vibrio cholerae TM 11079-80] gi|229341819|gb|EEO06821.1| GTP-binding protein Era [Vibrio cholerae TM 11079-80] Length = 324 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V + VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETE------GKYQAIYVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVLFVVEGTH-WTADDEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + P +++P S+ + K +VL+K + E + Sbjct: 140 PVVLCVNKVDQVK--DRNEVMLHMLELSKRMP--FVDIVPISAKQGKNTDVLKKHVREHL 195 >gi|260434834|ref|ZP_05788804.1| ribosome-associated GTPase EngA [Synechococcus sp. WH 8109] gi|260412708|gb|EEX06004.1| ribosome-associated GTPase EngA [Synechococcus sp. WH 8109] Length = 455 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 9/177 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A GR NVGKSSL+N + + A S G T+ D S ++ N P Sbjct: 174 EEEPIQMAIIGRPNVGKSSLLNAICGEQR-AIVSPIRGTTRDTI-----DTSIIRENRP- 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G R+ + +G I R L+ID GV + DQ + + Sbjct: 227 WRLVDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDVCVLVIDALDGVTEQDQRLAGRI 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++ + +V+ K D + + T + + + Y ++ TS++ + +E + Sbjct: 285 EEDGRACVVVVNKWDAVEKDSHTMTAMEKELRSKLYFLDWAPMLFTSALTGQRVESI 341 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L R A + PG T+ + + + + Sbjct: 3 RPVVAIIGRPNVGKSTLVNRLC-RSREAIVHDQPGVTRD------RTYQDGYWGDREFKV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + +++D + G+ D+ + FL Sbjct: 56 VDTGGLVF----DDDSEFLPEIREQAALALEEASVALVIVDGQQGLTAADESIAEFLRSH 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K + + + E P S++ G L +L Sbjct: 112 RCPTLLAVNKC--------ESPEQGLAMAGEFWSLGLGEPHPISAIHGAGTGELLDQVL 162 >gi|288556077|ref|YP_003428012.1| GTP-binding protein Der [Bacillus pseudofirmus OF4] gi|288547237|gb|ADC51120.1| GTP-binding protein EngA [Bacillus pseudofirmus OF4] Length = 437 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 13/174 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 I+ GR NVGKSSL+N ++ + + SN PG T+ ++ + Sbjct: 172 DPDTIRISLIGRPNVGKSSLVNAMLGEERV-IVSNIPGTTRDAI------DTSFTRDGQD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ + + L ERS V ++I+ G+ + D+ + + Sbjct: 225 YVLIDTAGMRKRGKVYESTEKYSVLRSLKAIERSN--VVLVVINAEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRK 197 + + IV+ K D + +T++K + IR+ ++ ++ TS+ ++ Sbjct: 283 HEAGRAVIIVVNKWDAIERDD--KTMQKFEQKIRDEFLFLSYAPILFTSAKTKQ 334 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 21/180 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + +A + PG T+ + ++ + L+ Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-VAIVEDMPGVTRDR-LYSHGEWLD-----REFNLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G A P + + + +++ R G+ DQ+V L + Sbjct: 57 DTGGIELADEP-----LLNQMREQAELAIEEADVIVFIVNGREGITSADQEVAKILFRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D + L Y P S G+ L +L+ Sbjct: 112 KPVVLGVNKVD---------NPDMHDLLYEFYSLGIGNPFPISGSHGLGLGDLLDEVLKH 162 >gi|253999419|ref|YP_003051482.1| GTP-binding protein EngA [Methylovorus sp. SIP3-4] gi|313201441|ref|YP_004040099.1| small GTP-binding protein [Methylovorus sp. MP688] gi|253986098|gb|ACT50955.1| small GTP-binding protein [Methylovorus sp. SIP3-4] gi|312440757|gb|ADQ84863.1| small GTP-binding protein [Methylovorus sp. MP688] Length = 523 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 75/173 (43%), Gaps = 11/173 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P++A GR NVGKS+L+N L+ ++ + + PG T+ +L+ N ++ Sbjct: 178 PKVAIVGRPNVGKSTLVNALLGQERV-IAFDQPGTTRDSIHI------DLERNGKHYTII 230 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + ++ + +++ + L++D + G+ + D V +++ + Sbjct: 231 DTAGVRKRGKVFEAIEKFS--VIKTIQAIEEANVAILVVDAQEGITEQDAHVAAYILEAG 288 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + K D L + ++ A + S++++KG+ L Sbjct: 289 RALVVAINKWDGLKEDERDWIKREIDRKLQFLDFA--KFHYISALRKKGLPEL 339 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 20/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P I GR NVGKS+L N L + A ++ PG T+ + + + Sbjct: 2 LPTIVLVGRPNVGKSTLFNRLT-KSRDALVADLPGLTRD------RHYGRGIGGDKPFLV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G+ + + + L V ++D R+G+ D+ + L K Sbjct: 55 VDTGGFEPLVDSGILKE----MAKQTLLAIDEADVVIFMVDGRNGLAPQDKVIADRLRKS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + K E +++ + + + SS +G+ L + Sbjct: 111 QRPVLLAVNKT---------EGMQRAIVSAEFHELGLGDPLSISSAHGEGVRDLVE 157 >gi|331002253|ref|ZP_08325772.1| GTP-binding protein engA [Lachnospiraceae oral taxon 107 str. F0167] gi|330411347|gb|EGG90763.1| GTP-binding protein engA [Lachnospiraceae oral taxon 107 str. F0167] Length = 443 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA G+ NVGKSS+IN L + + S+ G T+ + + NN Sbjct: 175 DDDRPRIAIVGKPNVGKSSIINRLTGQNRV-IVSDIAGTTRDAI------DTVVVNNKQE 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K++++ + I+R ++ V L+ID GV + D + Sbjct: 228 YVFIDTAGLRRKSKVKEDIERYS--IIRTVTAVERADVVILVIDANEGVTEQDAKIAGIA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + + K D + E + K ++ P A E I S++ + ++ L Sbjct: 286 HDRGKGIIVAVNKWDLVEKDNKTIYEYTDNIKRILSFMPYA--EYIFISALSGQRLQKLF 343 Query: 204 KAI 206 + I Sbjct: 344 EMI 346 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 62/178 (34%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + ++ + PG T+ + ++ L+ Sbjct: 4 PVVAIIGRPNVGKSTLFNAIAGEP-ISIVKDTPGVTRDRIY------ADCTWLDMNFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + T + + D R G+ D V L K Sbjct: 57 DTGGI----EPDSSDIILSQMREQAEIAIETADVIVFITDVRQGLVDSDSKVCDMLRKSR 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D ++ + Y + + S+ R GI L A+ Sbjct: 113 KPVVLAVNKVDSIAK--------FGNDVYEFYNLGIGDPVAISAASRLGIGDLLDAVA 162 >gi|303257594|ref|ZP_07343606.1| ribosome-associated GTPase EngA [Burkholderiales bacterium 1_1_47] gi|330999635|ref|ZP_08323344.1| ribosome biogenesis GTPase Der [Parasutterella excrementihominis YIT 11859] gi|302859564|gb|EFL82643.1| ribosome-associated GTPase EngA [Burkholderiales bacterium 1_1_47] gi|329574141|gb|EGG55717.1| ribosome biogenesis GTPase Der [Parasutterella excrementihominis YIT 11859] Length = 443 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 77/179 (43%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A +GR N GKS+LIN L+ L + PG T+ + L+D Sbjct: 179 KVAIAGRPNAGKSTLINALIGEDRL-IAFDMPGTTRDAI------EVEFQYKDRDYTLID 231 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +++ L + V LL+D G+ + D ++ ++ + Sbjct: 232 TAGLRRKGKVFEAIEKFS--VIKTLQAIESSNVVVLLLDAHAGIAEQDANIAGYILESGR 289 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D L + E+ + + + +++ S+++++G+ L A+ + Sbjct: 290 ALVVGVNKWDSLDDYERRRVKEELERKL--HFLRWAKIVYISALEKRGLHHLLNAVNDA 346 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 21/180 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + + + Sbjct: 2 VPVIALVGRPNVGKSTLFNRLTRSRD-ALVADFPGLTRD------RHYGDGRIGDKPYLV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G+ R + + + + V L+D R G+ DQ + L + Sbjct: 55 IDTGGFEPIRTEGIVKE----MTGQAQLAITESDVVLFLVDGRAGLTPQDQRIAQNLRES 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K + L+ T E Y A E S+ +G++ L +LE Sbjct: 111 GKKTYLVVNKAEGLTETAKAE----------FYELALGEPYTISAAHGEGVKALMDLVLE 160 >gi|153214498|ref|ZP_01949407.1| GTP-binding protein Era [Vibrio cholerae 1587] gi|153803091|ref|ZP_01957677.1| GTP-binding protein Era [Vibrio cholerae MZO-3] gi|153826892|ref|ZP_01979559.1| GTP-binding protein Era [Vibrio cholerae MZO-2] gi|153830876|ref|ZP_01983543.1| GTP-binding protein Era [Vibrio cholerae 623-39] gi|229524447|ref|ZP_04413852.1| GTP-binding protein Era [Vibrio cholerae bv. albensis VL426] gi|229527068|ref|ZP_04416463.1| GTP-binding protein Era [Vibrio cholerae 12129(1)] gi|254226245|ref|ZP_04919838.1| GTP-binding protein Era [Vibrio cholerae V51] gi|254291660|ref|ZP_04962448.1| GTP-binding protein Era [Vibrio cholerae AM-19226] gi|262190710|ref|ZP_06048941.1| GTP-binding protein Era [Vibrio cholerae CT 5369-93] gi|297581084|ref|ZP_06943009.1| GTP-binding protein Era [Vibrio cholerae RC385] gi|124115300|gb|EAY34120.1| GTP-binding protein Era [Vibrio cholerae 1587] gi|124121373|gb|EAY40116.1| GTP-binding protein Era [Vibrio cholerae MZO-3] gi|125621218|gb|EAZ49559.1| GTP-binding protein Era [Vibrio cholerae V51] gi|148873645|gb|EDL71780.1| GTP-binding protein Era [Vibrio cholerae 623-39] gi|149739255|gb|EDM53517.1| GTP-binding protein Era [Vibrio cholerae MZO-2] gi|150422432|gb|EDN14391.1| GTP-binding protein Era [Vibrio cholerae AM-19226] gi|229335465|gb|EEO00947.1| GTP-binding protein Era [Vibrio cholerae 12129(1)] gi|229338028|gb|EEO03045.1| GTP-binding protein Era [Vibrio cholerae bv. albensis VL426] gi|262033422|gb|EEY51929.1| GTP-binding protein Era [Vibrio cholerae CT 5369-93] gi|297534910|gb|EFH73746.1| GTP-binding protein Era [Vibrio cholerae RC385] Length = 324 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V + VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETE------GKYQAIYVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVLFVVEGTH-WTADDEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + P +++P S+ + K +VL+K + E + Sbjct: 140 PVVLCVNKVDQVK--DRNEVMLHMLELSKRMP--FVDIVPISAKQGKNTDVLKKHVREHL 195 >gi|327183708|gb|AEA32155.1| GTPase Era [Lactobacillus amylovorus GRL 1118] Length = 301 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K +A TSN P T++ + ++ + VD Sbjct: 11 VALVGRPNVGKSTLMNYLVGQK-VAITSNKPQTTRNRISGIYT------SDDMQIVFVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG P +D + LS + + V +++ + + DQ + L + V Sbjct: 64 PGI---FKPHSKLDDYMD--KASLSSLNDVDLVLFMVEP-EKIGKGDQYIADLLKEVKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ P ++ L + E++P S+ + GIE L + + + Sbjct: 118 VFLVINKVDQIHPNKLLPIMDSYHKL-----ESFKEILPISATQGIGIEDLLATLNKYL 171 >gi|307266976|ref|ZP_07548493.1| GTP-binding protein Era [Thermoanaerobacter wiegelii Rt8.B1] gi|306918025|gb|EFN48282.1| GTP-binding protein Era [Thermoanaerobacter wiegelii Rt8.B1] Length = 302 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N ++ K +A TS P T++ + L + + VD Sbjct: 8 VALVGRTNVGKSTLLNAILQEK-IAITSPKPQTTRNTIHGI------LTTDEYQVIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + +I + + +I+ + D+ + L + Sbjct: 61 PGI---HKPKSKLSEF--MIEVAKRTLKEVDLILYMIEPDTEIGPGDRYIIEHLKEVDTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + +ET++ K +V+ S+++ K I++L++ I+ + Sbjct: 116 VILVVNKIDLVPEKRVEETIKIFKEQ-----YEFKDVVAISAIENKNIDLLKEKIVSLL 169 >gi|237745515|ref|ZP_04575995.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS] gi|229376866|gb|EEO26957.1| GTP-binding protein engA [Oxalobacter formigenes HOxBLS] Length = 445 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 20/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L R A ++ PG T+ + + + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-RSRAALVADYPGLTRD------RHYGEGRMGDRPFLVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ K+ V + + + V ++D R G+ D+ + +L K Sbjct: 56 DTGGFEP--VVKEGV--LQEMAKQTKQAVAESDVVVFMVDGRQGITPHDKAITDYLRKCG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K E ++ T + Y + + SS G+ L + L Sbjct: 112 RPVILVVNKA---------EGMKYTAVVADFYELGLGDPLVISSAHGDGVHTLLEEALGK 162 Query: 210 INY 212 + Y Sbjct: 163 VPY 165 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 11/171 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS++IN L+ + + + PG T+ + + LVD Sbjct: 183 LAVVGRPNVGKSTMINALLGEERV-IAFDLPGTTRDAIEI------PFERDGKHYTLVDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L S V LL+D + + + D + F+ + + Sbjct: 236 AGLRKRGKVFQAIEKFS--VVKTLQAISEANVVLLLLDAQQDISEQDAHIAGFVLESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + K D L P +E + + + + + + S++K GI L Sbjct: 294 LVVGINKWDGLPPDKRREVKAEVERKL--HFLSFAKFHYVSALKATGIGAL 342 >gi|170725905|ref|YP_001759931.1| GTP-binding protein EngA [Shewanella woodyi ATCC 51908] gi|238688689|sp|B1KLB1|DER_SHEWM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|169811252|gb|ACA85836.1| small GTP-binding protein [Shewanella woodyi ATCC 51908] Length = 488 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++A G+ NVGKS+L N ++ + + +APG T+ + ++ + Sbjct: 196 QDLPIKLAVIGKPNVGKSTLTNRILGEERVV-VYDAPGTTRDSIYI------PMERDGRE 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +++ L V L++D R G+ + D + F Sbjct: 249 YVLIDTAGVRRRSKVNETVEKFS--VIKTLKAVEDCNVVLLIVDAREGIAEQDLGLLGFA 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + + + S++ G+ L ++ Sbjct: 307 LNAGRALVIAVNKWDGIDQDIKDRVKSELDRRLG--FIDFARIHFISALHGTGVGHLFES 364 Query: 206 ILET 209 + E Sbjct: 365 VQEA 368 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADYPGLTRDRKY------GRAHLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + ++ V L D R G+ DQ + L ++ Sbjct: 55 VDTGGI---DGTEEGIETH--MAEQSMAAIEEADVVLFLTDARAGLTAADQAISEHLRRR 109 Query: 149 AVSYQIVLTKIDKLS 163 + +V K+D + Sbjct: 110 EKTTFVVANKVDGID 124 >gi|145589468|ref|YP_001156065.1| small GTP-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189037153|sp|A4SYD7|DER_POLSQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|145047874|gb|ABP34501.1| small GTP-binding protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 454 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 72/177 (40%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +IA GR NVGKS+LIN L+ + + + PG T+ + N Sbjct: 177 PNRPMKIAVVGRPNVGKSTLINKLIGEERV-IAFDMPGTTRDAI------EVPFERNGKP 229 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G + ++ + +V+ L + V L++D + + + D + F+ Sbjct: 230 YILVDTAGLRRRGKVFEAIEKFS--VVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFI 287 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + + K D L + + +R A V P S+ K G++ L Sbjct: 288 VEAGRALVVAVNKWDGLDAYVKERARLEIAQKLRFLDFA--NVHPISAKKGTGLKDL 342 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 66/182 (36%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I GR NVGKS+L N L ++ A ++ G T+ + + + A V Sbjct: 3 PVITIVGRPNVGKSTLFNRLTRSRD-ALVADFSGLTRD------RHYGKGRIGERAFICV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ V + ++E V L+D R G+ D+ + FL K Sbjct: 56 DTGGFEPVAKTG-IVAEMAKQTKQAVAES---DIVIFLVDGRLGMAPQDRVIADFLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K E ++ + E P SS G++ L L++ Sbjct: 112 RPVILAVNKT---------EGMQSGIVTADFHELGLGEPFPISSAHGDGVKGLIDDALDS 162 Query: 210 IN 211 + Sbjct: 163 LG 164 >gi|39935764|ref|NP_948040.1| GTP-binding protein Era [Rhodopseudomonas palustris CGA009] gi|39649617|emb|CAE28139.1| possible GTP-binding protein Era [Rhodopseudomonas palustris CGA009] Length = 308 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + S T+ L + + + + LVD Sbjct: 18 VALIGAPNVGKSTLVNALVGSK-VTIVSRKVQTTRALIRGIVIESGS------QIILVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ +D ++ S V +L+D R G+ + +D+ + L Sbjct: 71 PGI---FAPKRRLDR--AMVKTAWSGAHDADIVCVLLDARAGINEQAEDILANLANVDRP 125 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID ++ + + A + S++ G++ LRKA+ + Sbjct: 126 KLLVLNKIDLIAREKLLALAQAANQRL-----AFDQTFMVSALTGDGVDDLRKALAAQV 179 >gi|238019393|ref|ZP_04599819.1| hypothetical protein VEIDISOL_01257 [Veillonella dispar ATCC 17748] gi|237864092|gb|EEP65382.1| hypothetical protein VEIDISOL_01257 [Veillonella dispar ATCC 17748] Length = 444 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 11/178 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A GR NVGKSSL N L+ + + S+ G T+ + + Sbjct: 175 DEDTIHVAVIGRPNVGKSSLTNALLGQDRV-IVSDVAGTTRDSI------DTYWTHGDQK 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + IVR L V L++D + GV + D+ + + Sbjct: 228 FVLIDTAGMRRKSKIEEAVERYS--IVRSLRSVDRSDIVVLVLDAQDGVTEQDKKIAGYA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVL 202 + IV+ K D + + TL T+ + ++ S++ ++ I L Sbjct: 286 YEAGKGVIIVVNKWDLIEKDD-KTTLRFTEDIYDELGFLQFAPILFASALTKQRIHRL 342 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 18/175 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN K ++ + PG T+ +F + + ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVN-KRISIVEDIPGVTRDRIYF------DAEWLNREFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L + ++D + G+ D++V + L Sbjct: 57 DTGGIEFITDNSHVIPKMMRLQAE--LAIEEADVILFVVDGKQGIVPADEEVANILRASG 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID ++ + Y + I S+ + L Sbjct: 115 KPVVLVVNKIDSVNQEP---------NIYEFYNLGLGDPIGISAKNLMNLGDLLD 160 >gi|192291351|ref|YP_001991956.1| GTP-binding protein Era [Rhodopseudomonas palustris TIE-1] gi|192285100|gb|ACF01481.1| GTP-binding protein Era [Rhodopseudomonas palustris TIE-1] Length = 307 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G NVGKS+L+N LV K + S T+ L + + + + LVD Sbjct: 17 VALIGAPNVGKSTLVNALVGSK-VTIVSRKVQTTRALIRGIVIESGS------QIILVDT 69 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ +D ++ S V +L+D R G+ + +D+ + L Sbjct: 70 PGI---FAPKRRLDR--AMVKTAWSGAHDADIVCVLLDARAGINEQAEDILANLANVDRP 124 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID ++ + + A + S++ G++ LRKA+ + Sbjct: 125 KLLVLNKIDLIAREKLLALAQAANQRL-----AFDQTFMVSALTGDGVDDLRKALAAQV 178 >gi|113478139|ref|YP_724200.1| tRNA modification GTPase TrmE [Trichodesmium erythraeum IMS101] gi|123056073|sp|Q10VJ7|MNME_TRIEI RecName: Full=tRNA modification GTPase mnmE gi|110169187|gb|ABG53727.1| tRNA modification GTPase trmE [Trichodesmium erythraeum IMS101] Length = 467 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 20/181 (11%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N + + A ++ PG T+ + S L + ++D Sbjct: 228 KVAIIGRPNVGKSSLLNAW-SHSDRAIVTDLPGTTRDVV------ESQLVVGGIPVQVLD 280 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + V+ G + R + V L ID + G ++D+ ++ + + + Sbjct: 281 TAGI---RETEDRVEKIG--VERSCQAAESADIVLLTIDAQVGWTELDEVIYQQVKHRFL 335 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ K+D++ E + + YP V+ T+++ +GIE L AIL + Sbjct: 336 --ILIINKVDQVDLV----HSELIRSIF--YPETIKNVVATAAINNQGIEELEAAILNAV 387 Query: 211 N 211 N Sbjct: 388 N 388 >gi|294495917|ref|YP_003542410.1| GTP-binding protein HSR1-related protein [Methanohalophilus mahii DSM 5219] gi|292666916|gb|ADE36765.1| GTP-binding protein HSR1-related protein [Methanohalophilus mahii DSM 5219] Length = 207 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 29/204 (14%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 +PK EI F+GRSNVGKSS++ L K + PG T Sbjct: 6 VPKNNDFEIVFAGRSNVGKSSIVKALSGSK--VKVGKRPGVT----------LKPTHVKK 53 Query: 84 PAMALVDMPGYGYARAPKKNV-DSWGGLIVRYLSE---RSTLRCVYL-------LIDC-- 130 + + D+PG+G+ K+ D IVRY+ E R + + + ++D Sbjct: 54 GELVMTDLPGFGFMNGVKERKQDIVKDKIVRYIEEGKQRINIAAIVVDAGSFVEVVDRWD 113 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPE 187 + G ID ++F F + + IV+ K+DK+ L+ + +P Sbjct: 114 QRGELPIDIEIFDFFTEMDLEPLIVVNKMDKIKDKDQDRVLDDIIERLGLFPPWRQWIDR 173 Query: 188 VIPTSSVKRKGIEVLRKAILETIN 211 V P S+ K ++ L + + I+ Sbjct: 174 VAPISAKKGD-LQALNSILRKRIH 196 >gi|148556031|ref|YP_001263613.1| GTP-binding protein EngA [Sphingomonas wittichii RW1] gi|148501221|gb|ABQ69475.1| small GTP-binding protein [Sphingomonas wittichii RW1] Length = 454 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 66/188 (35%), Gaps = 30/188 (15%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A P +A GR NVGKS+L N LV +K LA + PG T+ + Sbjct: 2 AQLPTVAIVGRPNVGKSTLFNRLVGKK-LALVDDRPGVTRDRR------EGDATLIGLDF 54 Query: 87 ALVDMPGYG---YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D G+ P + + ++D R GV +D++V Sbjct: 55 RVIDTAGFETDDPQTLPGRMRAQTQAAVRE-------ADVALFMVDARAGVTPLDEEVAL 107 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI---- 199 +L + +V K E + Y + IP S+ +G+ Sbjct: 108 WLRGEDTPVVLVANKA---------EGKATEAGVHEAYGLGLGDPIPFSAEHGEGLVDLF 158 Query: 200 EVLRKAIL 207 E LR I Sbjct: 159 EALRPHIE 166 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 8/185 (4%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 AGP ++A GR N GKS+LIN ++ + + T G T+ + + D+ + + Sbjct: 182 AGPLKLAIVGRPNAGKSTLINKILGEQRM-ITGPEAGITRD-SIAIDWDWHAPDGTVRPI 239 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ + L V LL+D G++ D + + Sbjct: 240 RLIDTAGMRKRAKVQDKLEKLS--VADGLRAVDFAEVVVLLLDATLGLEAQDLRIADKVL 297 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRK 204 ++ + I L+K D + + + ++ S V +G++ L + Sbjct: 298 QEGRALIIALSKWD--VAADPPALFQGVRTALDEGLAQVKGLPLLTVSGVSGRGVDQLLQ 355 Query: 205 AILET 209 A ET Sbjct: 356 AAHET 360 >gi|260072547|gb|ACX30447.1| Era/TrmE family GTP-binding protein [uncultured SUP05 cluster bacterium] gi|269468505|gb|EEZ80163.1| GTPase [uncultured SUP05 cluster bacterium] Length = 469 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 21/199 (10%) Query: 20 EIGLLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKN-LARTSNAPGRTQHLNF 70 + LLP+A E +A GR NVGKS+LIN ++ + LA + PG T+ + Sbjct: 161 TLPLLPQATIEEEAEVEGIAVAVLGRPNVGKSTLINRILGEERVLAI--DMPGTTRDSIY 218 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 + L+D G R+ + ++ + I++ + V L++D Sbjct: 219 I------PFEREGQKYTLIDTAGIRRKRSTHEKIEIFS--IIKAIDALDRSHVVILVLDA 270 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 R GV + D + + K + IV+ K D L E K K ++ + V Sbjct: 271 REGVTEQDATLLGMIADKGRALLIVINKWDGLDDYQKSEV--KRKLDVKLSFVNYASVHY 328 Query: 191 TSSVKRKGIEVLRKAILET 209 S++ G+ L I+++ Sbjct: 329 ISALHGSGVGKLFAPIIKS 347 Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 19/175 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P I+ GR NVGKS+L N L N + A S+ G T+ + + + + Sbjct: 2 GLPVISLVGRPNVGKSTLFNRLSNSRQ-ALVSDFEGLTRDRQYAEILLDDD---SQTFVT 57 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G + L+ +Y ++ R GV +D ++ S L + Sbjct: 58 IIDTGGLTGDDNIVDSGIQGQV-----LNALEESDVIYFIVSARDGVIGLDLEIASQLRR 112 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V K + L + A E Y E S+ +GI L Sbjct: 113 LKKDIILVCNKAEGLDESLAAE----------FYELGLGEPRLISAEHSQGIGDL 157 >gi|332185040|ref|ZP_08386789.1| ribosome-associated GTPase EngA [Sphingomonas sp. S17] gi|332014764|gb|EGI56820.1| ribosome-associated GTPase EngA [Sphingomonas sp. S17] Length = 456 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 26/188 (13%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A P +A GR NVGKS+L N LV +K LA + PG T+ + Sbjct: 2 AKLPIVAIVGRPNVGKSTLFNRLVGKK-LALVDDRPGVTRDRR------EGDAHLLGLDF 54 Query: 87 ALVDMPGYG---YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 ++D GY P + + L+D R G+ +D+++ Sbjct: 55 RVIDTAGYEDEDPDTLPGRMRRQTEAAVGE-------ADVALFLVDARAGIMPLDEEIAR 107 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + K E + ++ + + S+ +G+ L Sbjct: 108 WLRSSDTPIVLAANKA---------EGRAAEQGILEALALGFGDPVQLSAEHGEGVGDLF 158 Query: 204 KAILETIN 211 +A+L I+ Sbjct: 159 EALLPFID 166 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 8/186 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P ++A GR N GKS+LIN + + L T G T+ + + ++ + + Sbjct: 180 PFAPLKLAIVGRPNAGKSTLINRFLGQDRL-ITGPEAGITRD-SIAIDWEWRDRDGEVRQ 237 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G + ++ + L V LL+D G++ D + + Sbjct: 238 VRLIDTAGMRKKAKVQDKLEKLS--VADALRAVDFAEVVVLLLDATLGLESQDLRIADRV 295 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLR 203 ++ + I L K D K + + + ++ S+ KG++ L Sbjct: 296 LEEGRALLIALNKWD--VAENPSSLFNGVKKALEDGLSQVKGVPLLAVSAATGKGLDTLI 353 Query: 204 KAILET 209 +A ET Sbjct: 354 EAAFET 359 >gi|167772322|ref|ZP_02444375.1| hypothetical protein ANACOL_03699 [Anaerotruncus colihominis DSM 17241] gi|167665425|gb|EDS09555.1| hypothetical protein ANACOL_03699 [Anaerotruncus colihominis DSM 17241] Length = 442 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 64/183 (34%), Gaps = 19/183 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ + PG T+ ++ + + LV Sbjct: 4 PLIAIVGRPNVGKSTLFNKLAG-ARISIVEDTPGVTRDRVYY------ECEWRAKTVMLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K + + + + L+ D + GV DQDV L K Sbjct: 57 DTGGIEPYSTDK----ILSQMRRQAQLAIDSADVIILVTDIQSGVTATDQDVAVMLQKSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K D+L Y + I SSV G L A Sbjct: 113 KPVVLAVNKCDRLGDVPPD--------FYEFYNLGLGDPIAVSSVHGHGTGDLLDACYAH 164 Query: 210 INY 212 I++ Sbjct: 165 IDF 167 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 76/183 (41%), Gaps = 14/183 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ NVGKSSL+N + + + S+ G T+ + ++N +D Sbjct: 179 KVAVIGKPNVGKSSLVNRVAGEER-SIVSDMAGTTRDAV------DTVVENEYGRFVFID 231 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ ++ + L +RS ++ID G + D + + ++ Sbjct: 232 TAGIRRKSRVEEQIERYSVLRAYMAVDRSD--VCVIMIDATVGFTEQDSKIAGYAHERGK 289 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K D + +T++ + + ++ ++ S++ + I+ L + I + Sbjct: 290 GCIVAVNKWDAIEKDG--KTMQTFRKKLETDFSFMSYAPILFISAMTGQRIDKLFEQI-Q 346 Query: 209 TIN 211 +N Sbjct: 347 YVN 349 >gi|85712733|ref|ZP_01043778.1| GTP-binding protein EngA [Idiomarina baltica OS145] gi|85693465|gb|EAQ31418.1| GTP-binding protein EngA [Idiomarina baltica OS145] Length = 479 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 15/186 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 A P ++A GR NVGKS+L N ++ + + PG T+ + ++ + Sbjct: 188 DALPLKLAIVGRPNVGKSTLTNRILGEDRVV-VFDMPGTTRDSVYI------PMERDGRE 240 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L V +ID R + D ++ F Sbjct: 241 YVLIDTAGVRRRGRIDEAIEKYS--VVKTLQAIEDANVVLAVIDARETISDQDLNLIGFA 298 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 S I + K D L Q+ ++ K + + S++ G+ L Sbjct: 299 LNAGRSIVIAVNKWDGL----QQDHKDEIKRELDRRLGFVDFARLHFISALHGTGVGHLF 354 Query: 204 KAILET 209 +++ E Sbjct: 355 ESVEEA 360 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 66/176 (37%), Gaps = 21/176 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 LPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQAN------YDGYQFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G V + + L V L+D R GV DQ + + L K+ Sbjct: 55 VDTGGIHGDEEGIDEV-----MAKQSLQAIEEADVVLFLVDARDGVTVGDQAIATHLRKQ 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V KID + +A + Y A + ++ +G+E L Sbjct: 110 KKKVYLVANKIDGIDADSA---------MADFYSLALGNLYGIAAAHGRGVEHLLD 156 >gi|260893088|ref|YP_003239185.1| ribosome-associated GTPase EngA [Ammonifex degensii KC4] gi|260865229|gb|ACX52335.1| ribosome-associated GTPase EngA [Ammonifex degensii KC4] Length = 447 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 75/204 (36%), Gaps = 28/204 (13%) Query: 21 IGLLPKAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 I LP E +A GR NVGKSSL+N L+ + + S+ PG T+ Sbjct: 162 IDRLPPEDREEERPQAEAIAVAIVGRPNVGKSSLVNALLGEERV-IVSDIPGTTRDAV-- 218 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC---VYLLI 128 + L+D G K+ + L R LR L++ Sbjct: 219 ----DTFFTWEGQPYILIDTAGLRRRSRIKEEAERQSC-----LRARQALRRAHVAVLVL 269 Query: 129 DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHP 186 D GV D+ + +++ + I + K D + S A LE + + Y + Sbjct: 270 DGAEGVTMQDKRIAGLIEEAGRAVVIAVNKWDLVPSSRKDAPRYLEALRREL--YFINYA 327 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 V+ T + + G+ + + + Sbjct: 328 PVVFTVAPEGFGVTQVLTEVERAL 351 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 19/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P + GR NVGKS+L N LV K +A PG T+ + ++ Sbjct: 2 GKPVVVIVGRPNVGKSTLFNRLVG-KGVAIVEEEPGVTRDRLY------REVEWCGREFV 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD G + V + + L E V ++D + GV DQ + S L + Sbjct: 55 LVDTGGVVESPESPLEVAIRRQ-VEQALEE---ADLVLFVVDYKTGVTAEDQAIASMLRR 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+DK P E IP S+ + + L A++ Sbjct: 111 TGKPTLLVVNKVDKFDPPPVLSDFYAL--------GLSTEPIPVSAAQGLNVGDLLDAVI 162 Query: 208 ETI 210 + + Sbjct: 163 DRL 165 >gi|163848650|ref|YP_001636694.1| GTP-binding protein EngA [Chloroflexus aurantiacus J-10-fl] gi|222526586|ref|YP_002571057.1| GTP-binding protein EngA [Chloroflexus sp. Y-400-fl] gi|189037140|sp|A9WHH9|DER_CHLAA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783145|sp|B9LBT6|DER_CHLSY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|163669939|gb|ABY36305.1| small GTP-binding protein [Chloroflexus aurantiacus J-10-fl] gi|222450465|gb|ACM54731.1| small GTP-binding protein [Chloroflexus sp. Y-400-fl] Length = 449 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 13/176 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N L+ ++ + S+ PG T+ + + + + L+D Sbjct: 185 IAIVGRPNVGKSSLLNRLLGQER-SVVSSIPGTTRDPI------DTTITYHGEPITLIDT 237 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A ++ ++ + L R L LLID GV D + + + Sbjct: 238 AGIRRAGKIERGIEKYSVL--RTLRAIERCDVALLLIDATEGVTAQDTHIAGMVVEAKKG 295 Query: 152 YQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +V+ K D + + ++ + + + ++ S++ + + L Sbjct: 296 LILVVNKWDAIEKDSHTYYAFQDQVREAFK--FVDYAPIVFVSALTGQRVSHLLDY 349 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 63/183 (34%), Gaps = 18/183 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+ N L+ + A + PG T+ + + N +V Sbjct: 4 PIVAIVGRPNVGKSTFFNRLIGERR-AIVEDLPGTTRDRLY------GDTFWNGREFTVV 56 Query: 90 DMPGYGYARAPKK--NVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D G + + + + + ++D R G+ D DV L Sbjct: 57 DTAGVLFGGEDPNLPEAEIARRTRAQAEHAIAEADAIIFIVDGRDGLTAADSDVADVLRT 116 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K D + E+ + Y E IP S+ G + + Sbjct: 117 TSKPVVLAVNKCD---------SQERMLDAVEFYALNLGEPIPMSAFHGLGTGDVLDRLT 167 Query: 208 ETI 210 E + Sbjct: 168 EYL 170 >gi|268608007|ref|ZP_06141738.1| small GTP-binding protein [Ruminococcus flavefaciens FD-1] Length = 442 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 66/181 (36%), Gaps = 9/181 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++A G+ N GKSSLIN + + + S+ G T+ + ++N Sbjct: 174 DDDCIKVAVIGKPNAGKSSLINKIAGEERV-IVSDIAGTTRD------STDTVIENEQGK 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + ++ + L +R+ +++D G + D V + Sbjct: 227 FVFIDTAGIRKKSKVTEKIEHYSVLRAYMAVDRAD--VCVIMLDATEGFTEQDSKVAGYA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + + + K D + +TK ++ + S+ + I L + Sbjct: 285 HEQGKACVVAVNKWDLIEKDDKTMQEFRTKLENDFSFMSYVPFVFISAKTGQRINKLYEL 344 Query: 206 I 206 I Sbjct: 345 I 345 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 63/183 (34%), Gaps = 19/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L N L+ ++ L+ + PG T+ + S + Sbjct: 2 SLPIVAVVGRPNVGKSTLFNKLIGQR-LSIVEDTPGVTRDRIY------SKCEWRGKEFM 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G P + + + + + D R GV D V L K Sbjct: 55 VVDTGGI----EPDSDDVILSQMRRQSELAIEKADVIVFVTDIRCGVTADDYTVAQMLLK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D L L Y + P SSV G + + Sbjct: 111 SGKPIVLAVNKVDNLGEPPL--------ELYEFYNLGLGDPFPISSVHGHGTGDMLDKVY 162 Query: 208 ETI 210 E + Sbjct: 163 EYL 165 >gi|238916971|ref|YP_002930488.1| GTP-binding protein [Eubacterium eligens ATCC 27750] gi|259645875|sp|C4Z0C8|DER_EUBE2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238872331|gb|ACR72041.1| GTP-binding protein [Eubacterium eligens ATCC 27750] Length = 441 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 17/189 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P++A G+ NVGKSS+IN LV KN S+ G T+ + +K N Sbjct: 174 EDDRPKVAIIGKPNVGKSSIINKLVG-KNRVIVSDIAGTTRDAI------DTAIKYNGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K++++ + I+R ++ L+ID GV + D + Sbjct: 227 YVFIDTAGLRRKSKIKEDLERFS--IIRTVAAVERADIAILVIDATEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 ++ I + K D + +T+ + I++ ++ E+I S+ + + Sbjct: 285 HERGKGIIIAVNKWDDIEKND--KTIYEFTNKIKDTLAFMSYAEIIFVSAKTGQRL---- 338 Query: 204 KAILETINY 212 I E +++ Sbjct: 339 NKIYELVDH 347 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 61/178 (34%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ ++ + PG T+ + + L+ Sbjct: 4 PIVAVVGRPNVGKSTLFNSLCGQQ-ISIVKDTPGVTRDRIYAEVSWLN------HNFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + T + + D + G+ D V L + Sbjct: 57 DTGGI----EPDTGDIILSQMREQAEIAIETADVIIFMTDVKQGLVDSDSKVADMLRRSH 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D + Y E P S+V + G + ++ Sbjct: 113 KPVILVVNKVDSFEK--------MMPDVYEFYNLGIGEPFPISAVNKLGFGEVLDEVV 162 >gi|268318173|ref|YP_003291892.1| small GTP-binding protein [Rhodothermus marinus DSM 4252] gi|262335707|gb|ACY49504.1| small GTP-binding protein [Rhodothermus marinus DSM 4252] Length = 434 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 26/182 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ N L R + A T + PG T+ + + N ++VD Sbjct: 4 VAIVGRPNVGKSTFFNRLT-RSHEAITHDQPGVTRDRVY------GTAEWNGVRFSVVDT 56 Query: 92 PGYGYARA---PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 GY + + + I + ++D GV +D + L + Sbjct: 57 GGYVPNSSDIFEQAIREQVQIAIEE-------ADAILFMVDVTTGVTDLDDALAELLRRT 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K D E+T Y EV P S++ +G L A+++ Sbjct: 110 DKPVFVVANKAD---------NDERTWEASTFYQLGLSEVYPISALSGRGTGELLDALVK 160 Query: 209 TI 210 + Sbjct: 161 RL 162 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 13/181 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P +A GR NVGKSSL N L+ ++ + ++ G T+ V K + + Sbjct: 172 DERPRLAIVGRPNVGKSSLTNALLGQER-SIVTDISGTTRDAVHSVLKYYG------REI 224 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G ++N++ + L LID G+ D + + Sbjct: 225 VLVDTAGLRRRSRIRENIEFYATLRTE--RALRECDVAITLIDATEGLTAQDIRILRQAE 282 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRK 204 + +V+ K D + T+++ + IR H ++ S+ R+ I + + Sbjct: 283 ELRKGMVLVVNKWDLIEKDA--NTMKEWEEAIRYRLPTWQHVPLVFISAKTRQRIHRVLE 340 Query: 205 A 205 A Sbjct: 341 A 341 >gi|116333425|ref|YP_794952.1| GTP-binding protein EngA [Lactobacillus brevis ATCC 367] gi|122269888|sp|Q03SA1|DER_LACBA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|116098772|gb|ABJ63921.1| Predicted GTPase [Lactobacillus brevis ATCC 367] Length = 435 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 78/194 (40%), Gaps = 13/194 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ PE PK + GR NVGKSSL+N ++ + + SN G T+ Sbjct: 160 VKEFPEKDGAPKDDSIRFSLIGRPNVGKSSLVNAMLGEERV-IVSNIAGTTRDAI----- 213 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + +VD G +N + + + R + V ++++ G+ Sbjct: 214 -DTKFVADDTKFTMVDTAGIRKRGKVYENTERYSVM--RAMRAIDDSDVVLVVLNAEEGI 270 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTS 192 ++ D+ V + + I++ K D L TL + LIR ++ +I S Sbjct: 271 REQDKRVAGYAHEAGRGIIILVNKWDTLKKD--NHTLTDFQNLIRIEFQYLSYAPIIFVS 328 Query: 193 SVKRKGIEVLRKAI 206 + + +E L + I Sbjct: 329 AKTGQRLEQLPEMI 342 Score = 97.9 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 62/179 (34%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + + ++ + PG T+ + ++ + + + Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGER-ISIVEDTPGVTRDRI-YSRAEWLGTEFRMIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 DM + + + + ++ G+ D+ V L + Sbjct: 62 DMGDEPFLTQITQQAEI----------AIDEADVIVFIVSAPEGITDADEKVAKILYRAD 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K D E + + Y + P S V G+ L A+++ Sbjct: 112 KPVILAVNKAD---------NPEVRESIYDFYSLGFGDPYPVSGVHGLGLGDLLDAVVK 161 >gi|296282892|ref|ZP_06860890.1| GTP-binding protein EngA [Citromicrobium bathyomarinum JL354] Length = 464 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 20/183 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + GR NVGKS+L N L +K LA + PG T+ F ++ + Sbjct: 2 LPRVIIIGRPNVGKSTLFNRLAGKK-LALVDDQPGVTRDRRF------GDVTLAGMRFTI 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + G + ++ + V ++D R G+ +D ++ ++L Sbjct: 55 VDTAG----WEDEDPSTLPGRMRMQTEVSIADADAVLFVVDARAGLTPLDNEIGNWLRTA 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V +V K E + Y E I S+ +G L +A+ Sbjct: 111 DVPVIVVANKA---------EGRSGDAGIFEAYSLGLGEPIGISAEHGEGTADLFEALWP 161 Query: 209 TIN 211 I Sbjct: 162 IIG 164 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 7/182 (3%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 GP ++A GR N GKS+LIN ++ L T G T+ + + Sbjct: 187 PTGPLKLAIVGRPNAGKSTLINRMLGEDRL-LTGPEAGITRDSIAIDWEWTDPDSGDTRE 245 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G R + ++ + V L++D G++ D + S Sbjct: 246 VRLIDTAGMRKKRNVVEKLEKLS--VADARRAVDFAEVVVLMLDATKGLEHQDLKIASLA 303 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLR 203 ++ + I + K D + ++ + +I S+ KG++ L Sbjct: 304 IEEGRALMIAINKWD--VAAEPSKLFNGIRFALDEGLAQVRGLPLIAVSAKTGKGLDQLI 361 Query: 204 KA 205 A Sbjct: 362 AA 363 >gi|225389099|ref|ZP_03758823.1| hypothetical protein CLOSTASPAR_02845 [Clostridium asparagiforme DSM 15981] gi|225044833|gb|EEG55079.1| hypothetical protein CLOSTASPAR_02845 [Clostridium asparagiforme DSM 15981] Length = 441 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P IA G+ NVGKSS+IN L+ + S+ G T+ + + ++ Sbjct: 174 EDERPRIAVVGKPNVGKSSIINKLLGENRV-IVSDIAGTTRDAV------DTEIVHDGTP 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + ++ + I+R ++ V ++ID + GV + D + Sbjct: 227 YVFIDTAGLRRKSKIHEELERYS--IIRTVTAVERADIVVVVIDAKEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + + K D + E K K ++ P A E + S+ + + L Sbjct: 285 HERGKGIIVAVNKWDAIEKNDKTIYEYTNKLKEILSFIPYA--EYLFVSAATGQRLPKLF 342 Query: 204 KAI 206 + I Sbjct: 343 EVI 345 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 21/183 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + ++ L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGE-TISIVKDTPGVTRDRIY------ADCSWLNMNFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + + +T + ++D R G+ D V L K Sbjct: 57 DTGGI----EPDTSDVILSQMREQAEIAIATADVIVFIVDVRQGLVDADTKVADMLRKSR 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D + EK + Y + +P S+ R GI L +++ Sbjct: 113 KPVVLAVNKVD---------SYEKFGNDVYEFYNLGIGDPVPVSAASRLGIGDLLDEVVK 163 Query: 209 TIN 211 + Sbjct: 164 YFD 166 >gi|148238904|ref|YP_001224291.1| GTP-binding protein EngA [Synechococcus sp. WH 7803] gi|166225928|sp|A5GJ79|DER_SYNPW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|147847443|emb|CAK22994.1| GTP-binding protein engA [Synechococcus sp. WH 7803] Length = 455 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 9/176 (5%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P ++A GR NVGKSSL+N + + A S G T+ ++L Sbjct: 175 EEPIQLAIIGRPNVGKSSLLNAICGEQR-AIVSPIRGTTRDTI------DTSLVRENRPW 227 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G R+ + +G I R L+ID GV + DQ + ++ Sbjct: 228 RLVDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDVCVLVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + +V+ K D + + T + + + Y ++ TS++ + ++ + Sbjct: 286 EDGRACVVVVNKWDAVEKDSHTMTAMEKELRAKLYFLDWAPMLFTSALTGQRVDSI 341 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 64/182 (35%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + + A + PG T+ + + + + Sbjct: 3 RPVVAIIGRPNVGKSTLVNRLCHSRE-AIVHDEPGVTRD------RTYQDGYWGDRDFKV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + +++D + GV D+ + FL + Sbjct: 56 VDTGGLVF----DDDSEFLPEIREQAALALEEASVALVIVDGQQGVTASDEAIAEFLRGQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K + + + E P S++ G L +L Sbjct: 112 RCPALLAVNKC--------ESPEQGLAMAAEFWSLGLGEPYPISAIHGAGTAELLDQVLT 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|288801362|ref|ZP_06406816.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 299 str. F0039] gi|288331745|gb|EFC70229.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 299 str. F0039] Length = 437 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G P A GR N GKSS+IN + + G T+ + F Sbjct: 172 EDGIPRFAVVGRPNAGKSSIINAFMGEDRN-IVTEIAGTTRDSIYTRFDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L+ID G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEFYSVM--RSIRAIENSDVCILMIDATRGIETQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 + S +V+ K D + P Q+ + + IR P +I S++ ++ I Sbjct: 283 QRNNKSLVVVVNKWDLV-PDKDQKVITTFETAIRKRMAPFTDFPIIFASALTKQRI 337 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A S+ G T+ + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRS-AIVSDTAGTTRDRQYGKVD------WNGREFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G+ D + I R L V ++D + G+ D+DV L K V Sbjct: 58 GGWVVNSE-----DIFEDAIRRQVLIATEEANLVLFVVDVQTGLTDWDEDVAQILRKSKV 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+DK E+ Y E SS G L ++ + Sbjct: 113 PIILVVNKVDK---------NEQQYDAAEFYSLGLGEPFCISSSTGSGTGDLLDEVINNL 163 >gi|326331287|ref|ZP_08197579.1| ribosome-associated GTPase EngA [Nocardioidaceae bacterium Broad-1] gi|325950920|gb|EGD42968.1| ribosome-associated GTPase EngA [Nocardioidaceae bacterium Broad-1] Length = 461 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 72/196 (36%), Gaps = 21/196 (10%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 +R + E P P +A GR NVGKS+L+N ++ R+ A + PG T+ + Sbjct: 11 VRDLHETDETPAGPQPVVAVVGRPNVGKSTLVNRIIGRRE-AVVQDVPGVTRDRVSY--- 66 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + N A LVD G+ + I L+ V ++D G+ Sbjct: 67 ---DADWNGKAFTLVDTGGWDPDAQGLAERIAAQAEIAVSLA-----DAVLFVVDATVGI 118 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ V L K +V K+D + + E P S++ Sbjct: 119 TDADEAVVRILRKSGKPVVLVANKVD---------DMRTEAEASALWNLGLGEPWPVSAL 169 Query: 195 KRKGIEVLRKAILETI 210 +G + AIL + Sbjct: 170 HGRGSGDMLDAILAVL 185 Score = 91.4 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 67/200 (33%), Gaps = 21/200 (10%) Query: 21 IGLLPKAGP-PE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNF 70 + +LP P PE IA G+ NVGKSSL+N L + A N G T Sbjct: 182 LAVLPDPPPLPEGTEIGGPRRIALVGKPNVGKSSLLNKLAKEER-AVVDNVAGTTVDPV- 239 Query: 71 FVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC 130 ++ +D G + + L +R+ L+ID Sbjct: 240 -----DELIELGGREWRFIDTAGIRKRVKESSGHEYYASLRTTTAIDRAE--VAVLVIDG 292 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 + + D + + + + I K D + + + + + A I Sbjct: 293 GEKISEQDIRILQTVREAGRALVIAFNKWDLVDEDRRWQLDREIERELVQVQWA--PRIN 350 Query: 191 TSSVKRKGIEVLRKAILETI 210 ++ ++ L A+ + + Sbjct: 351 ITARTGWHVDRLVPALDKAL 370 >gi|309791206|ref|ZP_07685738.1| small GTP-binding protein [Oscillochloris trichoides DG6] gi|308226768|gb|EFO80464.1| small GTP-binding protein [Oscillochloris trichoides DG6] Length = 525 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 74/211 (35%), Gaps = 30/211 (14%) Query: 11 AWIFLRGVPEIGLLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 + F I P G PE +A GR NVGKS+ N L+ + A + P Sbjct: 42 SPTFGIMAQSIHGDPLDGSPERTVMTKPIVALVGRPNVGKSTFFNRLIGERR-AIVEDMP 100 Query: 63 GRTQHLN----FFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER 118 G T+ F+ +DF+ + D P A ++ + I Sbjct: 101 GTTRDRIYGDTFWNGRDFTVVDTAGLLFGG-DDPNLPVAEMSRRTREQANLAIEE----- 154 Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 V ++D R G+ D +V L + + + K D + + L+ ++ Sbjct: 155 --ADAVIFMVDGREGMTAADNEVADVLRGTSKPVVLAVNKCD-----SVERNLDAVEF-- 205 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 Y E IP S+ G + ++E Sbjct: 206 --YALNLGEPIPMSAFHSLGTGDVLDRLVEA 234 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 20/186 (10%) Query: 21 IGLLPKAGPP-------EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + P P IA GR NVGKSSL+N L+ ++ + S PG T+ Sbjct: 232 VEAFPPYQAPDDTERHLHIAIVGRPNVGKSSLLNKLLGQER-SVVSAIPGTTRDSI---- 286 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + + + L+D G + ++ ++ + + R L LLID G Sbjct: 287 --DTEITFHGERVTLIDTAGIRRSGRIEQGIEKYSVM--RTLRAIERCDVALLLIDAEEG 342 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPT 191 + D + + I++ K D + ET ++ + +R + V+ Sbjct: 343 ITAQDTHIAGMVLDAKKGIAILVNKWDVIEKD--NETFQEYEDQVRQAFKFIDYAPVLFI 400 Query: 192 SSVKRK 197 S++ + Sbjct: 401 SALSGQ 406 >gi|291297034|ref|YP_003508432.1| small GTP-binding protein [Meiothermus ruber DSM 1279] gi|290471993|gb|ADD29412.1| small GTP-binding protein [Meiothermus ruber DSM 1279] Length = 453 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 68/190 (35%), Gaps = 32/190 (16%) Query: 32 IAFSGRSNVGKSSLINILVNRK-----------NLARTSNAPGRTQHLNFFVPKDFSNLK 80 + GR NVGKSSL N L+ + A ++ PG T+ L V + Sbjct: 4 VVIVGRPNVGKSSLFNKLLGLRAAPEKAAKAGSQFAVVADVPGVTRDLKEGVV------E 57 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + LVD G +K + + V +D R + D + Sbjct: 58 SEQGRFKLVDTGGLWSGDVWEKKIKQKVE------RAIADADLVLFAVDGRSDIVTADLE 111 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 V FL ++ +V TKID + YL Y E +PTS+ +G + Sbjct: 112 VADFLRRQGKPVLLVATKID---------DPKHEAYLGSFYALGFGEPVPTSAAHSRGFD 162 Query: 201 VLRKAILETI 210 L + I + Sbjct: 163 ELLERIWALL 172 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 13/181 (7%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ P +A GR N GKSSL+N ++ + + S PG T+ Sbjct: 181 PEVVPIRLAIVGRPNAGKSSLLNAILGEERV-IVSEIPGTTRDSI------DVEFDYGGS 233 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G + P+ V+ IVR V L+ID + + + + + Sbjct: 234 RFLLVDTAGIR--KRPETGVEEQA--IVRAHQAIRDADVVLLVIDPK-ELGDHELKLANE 288 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + +TK D + + ++ H ++ SSV ++ + L Sbjct: 289 ALEAGKPVILTITKWDLIETKEEARRVRA-DLALKLSHVQHLPLLYVSSVTKQNLHKLLS 347 Query: 205 A 205 Sbjct: 348 E 348 >gi|330828483|ref|YP_004391435.1| GTP-binding protein era [Aeromonas veronii B565] gi|328803619|gb|AEB48818.1| GTP-binding protein era [Aeromonas veronii B565] Length = 299 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 16/173 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H + + + VD Sbjct: 10 VAIVGRPNVGKSTLLNKLLGQK-VSITSKKPQTTRHRILGIDTE------DNYQTIYVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG ++ + S + V ++D H + D+ V L Sbjct: 63 PGLHI----EEKRAINRLMNRAATSSLGDVAMVVFMVDGTH-WTKDDEMVLGKLRNLKCP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + KID + ++ L ++L + AH ++P S+ K +E +R+ Sbjct: 118 VVLAVNKIDNVK--EKEDLLPHLEWLGQQMNFAH--ILPISAEKGTNVEKIRE 166 >gi|298528797|ref|ZP_07016201.1| ribosome-associated GTPase EngA [Desulfonatronospira thiodismutans ASO3-1] gi|298512449|gb|EFI36351.1| ribosome-associated GTPase EngA [Desulfonatronospira thiodismutans ASO3-1] Length = 442 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 18/185 (9%) Query: 22 GLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 LP PE ++ GR NVGKSSL+N L+ ++ + S+ G T+ Sbjct: 168 SSLPAHEEPEDQAAHLRLSLLGRPNVGKSSLVNTLLGQERV-LVSSRAGTTRDCV----- 221 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 L+ +D G +++ + L R + L++D G+ Sbjct: 222 -DVILEKGDKRYVFIDTAGVRRKTTISDDLERFSAL--RAIRSCQRSDVALLVLDALSGM 278 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ + SFL+++ + IV+ K+D++ + + + AH VI TS + Sbjct: 279 VAQDKKLLSFLEREKIPLVIVVNKVDQIPRKDLGKLKRYFQDELA--FCAHAPVIYTSCI 336 Query: 195 KRKGI 199 R G+ Sbjct: 337 TRAGL 341 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 73/182 (40%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + GR NVGKS+L N L+ + A + PG T+ + ++ L Sbjct: 9 LPFVVIVGRPNVGKSTLFNRLLRQNK-AMVHDRPGVTRDSLY------GRVQGRTRDYTL 61 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + + + ++D GV +D+ + + L + Sbjct: 62 VDTGGLVLEQGAQLEEEIYEQVRE----AMHSADLILFMVDGSAGVTALDEQLAAMLRQS 117 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++V+ K+D + L + ++ + ++ S+ + VL++AI Sbjct: 118 RRPVRLVVNKVD----GEERAALVE-----GDFYSLGFDMNMVSAAHGYNMPVLQEAIES 168 Query: 209 TI 210 ++ Sbjct: 169 SL 170 >gi|298291622|ref|YP_003693561.1| GTP-binding protein Era [Starkeya novella DSM 506] gi|296928133|gb|ADH88942.1| GTP-binding protein Era [Starkeya novella DSM 506] Length = 304 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G N GKS+L N LV K ++ S+ T+ L + + + + LVD Sbjct: 13 VALIGAPNAGKSTLTNALVGTK-VSIVSHKVQTTRSLVRGIALEGT------TQIILVDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG APK+ ++ ++ S V LL+D R G+ + + + L Sbjct: 66 PGI---FAPKRRLEK--AMVRSAWSGAGDADAVVLLVDARAGMTEDVEAIIKGLADVKRP 120 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I+L KID + + E K LI + + S+ G++ LR+ + +T+ Sbjct: 121 RAILLNKIDLVKRDSLLELAAKVAELI-----SFDRLFMVSAQNGDGLKELREWLAQTL 174 >gi|326575993|gb|EGE25916.1| GTP-binding protein EngA [Moraxella catarrhalis CO72] Length = 472 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 11/172 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L+N L+ + + PG T+ + + + L+D Sbjct: 181 KLAIIGRPNVGKSTLVNRLLGEDRVV-VFDMPGTTRDSIYI------PFEREGRSYVLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + V+ + +V+ L V ++ID + G+ D + + Sbjct: 234 TAGVRRRGRIDEKVEKFS--VVKTLQAIKDANVVMVVIDAKEGIVDQDLHMLGYALDAGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + K D LS Q+ K + R ++ S++ G+ L Sbjct: 292 AIVVAINKWDGLSQD--QKDFVKIEIDRRFNFVPWVKIHLISALYGNGVGKL 341 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 29/182 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + A ++ G T+ + + + +V Sbjct: 5 PVVALIGRPNVGKSTLFNQLT-KSRQALVADLAGLTRDRQY------GDAHFENKSFIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G G +D G I Y++ +S V ++D R G+ D ++ F Sbjct: 58 DTGGIG-------EMDDGSGNIDDYMATQSYTAIHEADIVVFVVDARAGLIGADSEIAHF 110 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L +V K+D + E + E T++ +G+ L + Sbjct: 111 LHTLGKPVFLVANKMDGVHEAAYAE----------FFALGFGEPYATAASHGRGVTNLLE 160 Query: 205 AI 206 ++ Sbjct: 161 SL 162 >gi|295695440|ref|YP_003588678.1| GTP-binding protein Era [Bacillus tusciae DSM 2912] gi|295411042|gb|ADG05534.1| GTP-binding protein Era [Bacillus tusciae DSM 2912] Length = 300 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 17/178 (9%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKS+L+N L+ K +A S+ P T++ V L + +D P Sbjct: 13 ALVGRPNVGKSTLLNRLIGTK-IAIMSDKPQTTRNRIRGV------LTRENGQVIFLDTP 65 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G PK + + + L+ + V +ID +Q + L Sbjct: 66 GVHR---PKHRLGDYMNRLA--LATLQEVDLVLFVIDVTSKFGPGEQVILDHLQGVETPV 120 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID +SP +++ + + YP EV+P S+VK ++ L + I T+ Sbjct: 121 FLVINKIDLVSPEELLPMIDEHR---KRYP--FREVVPVSAVKGTNLDRLEERIFATL 173 >gi|296005001|ref|XP_002808841.1| GTPase, putative [Plasmodium falciparum 3D7] gi|225632236|emb|CAX64118.1| GTPase, putative [Plasmodium falciparum 3D7] Length = 657 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 16/178 (8%) Query: 28 GPPEIAFSGRSNVGKSSLINILV------NRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G EI GRSNVGKS+ + + N + S G T+ +N + ++ + Sbjct: 473 GVNEICILGRSNVGKSTFLRNFIRYLLKINENKDIKVSKNSGCTRSINLYSFEN----EK 528 Query: 82 NLPAMALVDMPGYGYA-RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + DMPG GYA KK +D + Y+ R+ + ++LID V++ID Sbjct: 529 RKRLFIITDMPGLGYAEGIGKKKMDYLRKNLDDYIFLRNQICLFFILIDMSVDVQRIDLS 588 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + + V ++++ TK DK LE I+N+ IP S + Sbjct: 589 LVDMIKRTNVPFRVICTKSDK-----YDSNLEGRLNAIKNFYNLDKIPIPISKFSKTN 641 >gi|167893952|ref|ZP_02481354.1| GTP-binding protein EngA [Burkholderia pseudomallei 7894] Length = 454 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 +IA GR NVGKS+L+N L+ + + PG T+ + + + N L Sbjct: 167 GIKIAIVGRPNVGKSTLVNTLIGEDRV-IAFDMPGTTRDSIY------VDFERNGKHYTL 219 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 220 IDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQ 277 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D L P + T ++ + S+ ++ GI L +++ + Sbjct: 278 GRALVVGVNKWDGLDPHVRERTKADLARKLK--FLEFAKFHFISAAEKTGIGALMRSVDD 335 Query: 209 T 209 Sbjct: 336 A 336 Score = 84.4 bits (208), Expect = 8e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 20/168 (11%) Query: 41 GKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP 100 GKS+L N L ++ A ++ PG T+ + + + +VD G+ Sbjct: 2 GKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGARPYLVVDTGGFEPVAKD 54 Query: 101 KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 + + V ++D R+G+ D+ + +L K +V+ K Sbjct: 55 G----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKA- 109 Query: 161 KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 E ++ T Y + S+ G+ + LE Sbjct: 110 --------EGMKYTAVASDFYELGLGDPRAISAAHGDGVNDMINEALE 149 >gi|237756325|ref|ZP_04584877.1| GTP-binding protein Era [Sulfurihydrogenibium yellowstonense SS-5] gi|237691511|gb|EEP60567.1| GTP-binding protein Era [Sulfurihydrogenibium yellowstonense SS-5] Length = 307 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ K L+ S P T+ V + +D Sbjct: 15 VAIVGRPNVGKSTLLNNIIGTK-LSIVSPRPQTTRMRILGV------KHLPDAQIIFLDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS-FLDKKAV 150 PG ++ +S + + ++ID G + D+++ +L K Sbjct: 68 PGVQKGGD-----LLTKSVMESVVSGIESADVILMVIDAEAGWTKEDKEIVENYLKKVNK 122 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KIDK+ +E++ + E +P S++K I+ L + I + + Sbjct: 123 PAILAINKIDKIKRDLVLPLIEESTKI-----YDFKEFVPISAIKNLNIDELIETIKKYL 177 >gi|228470615|ref|ZP_04055472.1| ribosome-associated GTPase EngA [Porphyromonas uenonis 60-3] gi|228307742|gb|EEK16718.1| ribosome-associated GTPase EngA [Porphyromonas uenonis 60-3] Length = 436 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 72/177 (40%), Gaps = 12/177 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P A GR N GKSSL+N L+ + ++ G T+ F ++ Sbjct: 171 PLLELPRFAIVGRPNAGKSSLLNALIGEERN-IVTDRSGTTRDSIFAEYDKYNQH----- 224 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G ++++ + ++R + +LID G++ D ++F Sbjct: 225 -FYLVDTAGIRKKGKVNEDLEYYS--VIRAIRAIENADVCIMLIDATRGIEAQDANIFRV 281 Query: 145 LDKKAVSYQIVLTKIDKLSPTTA--QETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + + + + K D + + Q T+E+ R P +I S++ ++ I Sbjct: 282 IQRNSKGLVVCVNKWDLVEDKSLPVQRTMEEAIRA-RFAPFTDFPIIFISALNKQRI 337 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L R A ++ G T+ + ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-RSRQAIVTDEAGTTRDRQYGHVTWCE------RTFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ + + + ++D +GV +D ++ L + + Sbjct: 58 GGWVLRSDDVFEEEINKQVR----IAVEEADLILFVVDILNGVTDLDDEIALMLRQTSKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D + Y + P S++ L IL + Sbjct: 114 VILVANKAD---------NFTQHNDAAEFYSLGLGDPHPISAINGSSTGDLLDHILGLL 163 >gi|322383675|ref|ZP_08057426.1| Era-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151887|gb|EFX44830.1| Era-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 300 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 27/184 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ V + +D Sbjct: 12 VALIGRPNVGKSTLMNQVIGQK-IAIMSDKPQTTRNKIHGVYT------TEHAQIVFLDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-----SERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 PG + Y+ S + + + L+D G+ D+ + L Sbjct: 65 PGIHKP----------QSKLGDYMMKVAHSTLAEVDAILFLVDVAEGIGGGDRFIIEQLK 114 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +VL KIDK+ P + K L YP E++P S+++ + + + I Sbjct: 115 SVQTPVILVLNKIDKVHPEDLLPVISTYKEL---YP--FTEIVPVSALQGNNVTTMLEQI 169 Query: 207 LETI 210 + + Sbjct: 170 TKYL 173 >gi|295399214|ref|ZP_06809196.1| GTP-binding protein Era [Geobacillus thermoglucosidasius C56-YS93] gi|312110184|ref|YP_003988500.1| GTP-binding protein Era [Geobacillus sp. Y4.1MC1] gi|294978680|gb|EFG54276.1| GTP-binding protein Era [Geobacillus thermoglucosidasius C56-YS93] gi|311215285|gb|ADP73889.1| GTP-binding protein Era [Geobacillus sp. Y4.1MC1] Length = 302 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+ +N ++ +K +A S+ P T++ V + + +D Sbjct: 11 VSIVGRPNVGKSTFLNRVIGQK-IAIMSDKPQTTRNKIQGVYT------TDDAQIIFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ L+ + + +I+ G + D + L + Sbjct: 64 PGM---HKPKHKLGDF--MMKVALNALKEVDLILFMINAEEGFGRGDAYIIERLKEVNTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + P +++ K L YP E+IP S+++ IE L + I + + Sbjct: 119 VFLVINKIDLVHPNDLLPLIDRYKEL---YP--FAEIIPISALQGNNIETLVEQIKKYL 172 >gi|240103824|ref|YP_002960133.1| GTP-binding protein [Thermococcus gammatolerans EJ3] gi|239911378|gb|ACS34269.1| GTP-binding protein, HSR1-related [Thermococcus gammatolerans EJ3] Length = 182 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 26/192 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I F GRSNVGKS+LI L +K + PG T+ ++ ++DM Sbjct: 2 IIFVGRSNVGKSTLIFRLTGKK--VKRGKRPGVTRK----------PVEVVWRNRRVIDM 49 Query: 92 PGYGYARA-PKKNVDSWGGLIVRYLSERST-LRCVYLLIDC-----------RHGVKQID 138 PG+G+ P++ + IV ++ + + + L++D + G +D Sbjct: 50 PGFGFMSGLPRQVQERIKDEIVHFIEDNADKIDLAVLVVDGKAAPEIIERWEKRGEIPVD 109 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + F FL + + + + KID++ K+ + +P S+ K Sbjct: 110 VEFFQFLRELEIPTIVAVNKIDRVKNVQRVIHYLAQKFGV-PLDEVPETFVPISAKFGKN 168 Query: 199 IEVLRKAILETI 210 IE L++ I + + Sbjct: 169 IEELKRLIEKKL 180 >gi|254480079|ref|ZP_05093327.1| putative GTPase [marine gamma proteobacterium HTCC2148] gi|214039641|gb|EEB80300.1| putative GTPase [marine gamma proteobacterium HTCC2148] Length = 417 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 15/177 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ + + PG T+ + + + + L+D Sbjct: 128 VAVVGRPNVGKSTLVNRLLGEDRVV-VFDEPGTTRDSIYI------DYQRDEQEYTLIDT 180 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + K+ V+ + IV+ L V L++D G+ D + +K Sbjct: 181 AGVRRRKNVKQTVEKFS--IVKTLKAIDDAHVVILVMDAHEGIVDQDMHLLGHCIEKGRG 238 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K D + P + K + R + S++ G+ L K+I Sbjct: 239 LVLAVNKWDGIEPDQR----DWIKSELGRRLAFADFADTHFISALHGTGVGHLYKSI 291 Score = 55.2 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 17/124 (13%) Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + +DS + + L V L+D R G+ DQ + L Sbjct: 1 MVIDTGGI---SGDEDGIDS--EMADQSLVAIEEADAVLFLVDAREGLNPADQALAKHLR 55 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ S+ +V+ KID L A Y + ++ +G+ R I Sbjct: 56 QRNKSFHLVVNKIDGLDADIASS---------DFYALGVESMFAIAASHGRGV---RNMI 103 Query: 207 LETI 210 E + Sbjct: 104 GEVM 107 >gi|89099128|ref|ZP_01172007.1| GTP-binding protein EngA [Bacillus sp. NRRL B-14911] gi|89086258|gb|EAR65380.1| GTP-binding protein EngA [Bacillus sp. NRRL B-14911] Length = 436 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 13/185 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 + + GR NVGKSSL+N ++ + + SN G T+ S L N Sbjct: 173 DDVIKFSLIGRPNVGKSSLVNAILGEERV-IVSNIAGTTRDAV------DSLLTYNGDQY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G ++ + + L R L V ++ID G+ + D+ + + Sbjct: 226 VIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVIDADEGILEQDKKIAGYAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRK 204 + + IV+ K D + +T++ + IR + + ++ S++ +K I L Sbjct: 284 EAGRAVVIVVNKWDAVEKDE--KTMKAFETNIREHFQFLDYAPIVFLSALTKKRIHTLIP 341 Query: 205 AILET 209 I + Sbjct: 342 QINQA 346 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N +V + ++ + PG T+ + ++ NL N+ + Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGER-ISIVEDIPGVTRDRI-YSSAEWLNLDFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + ++ + + L + R GV D+ V L K Sbjct: 62 DIGDEPFLEQIRQQAEI----------AIEEADVILFLTNGREGVTSADEAVAKILYKSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + KID +P + + Y E IP S G+ L Sbjct: 112 KPVVLGVNKID--NPDMRDQIYD-------FYALGFGEPIPISGSHGLGLGDLLDE 158 >gi|115377683|ref|ZP_01464876.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1] gi|310821559|ref|YP_003953917.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1] gi|115365289|gb|EAU64331.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1] gi|309394631|gb|ADO72090.1| GTP-binding protein EngA [Stigmatella aurantiaca DW4/3-1] Length = 462 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 13/192 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + LP G +A GR NVGKS+++N ++ K + S PG T+ S L Sbjct: 173 DAEALPDDGTLRVAIIGRPNVGKSTMVNAILKEKRVV-ASEVPGTTRDPI------DSAL 225 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + L D G R+ V+ + +V L LL+D D Sbjct: 226 TYKGHKLILTDTAGIRRKRSIAHRVEQFS--VVSALKVMDRSDVAVLLMDATEPAVDQDA 283 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRK 197 + + K + IV+ K D + T Q E + +++ + +I TS++ Sbjct: 284 KLAGLAEDKGRALVIVVNKWDLI--GTDQRRQEAYREALKHSLKFVGYAPIIFTSALTGS 341 Query: 198 GIEVLRKAILET 209 +E + +E Sbjct: 342 KVEKVVDIAVEL 353 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 24/184 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L R+ LA + PG T+ + +++ + A L+ Sbjct: 3 PLVAIVGRPNVGKSTLFNRLAGRR-LALVEDEPGVTRD------RHYADAQWGDRAFTLI 55 Query: 90 DMPGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ K+ + + + + D R G+ D+ V L Sbjct: 56 DTGGFVPGEKDSLLKQVREQAQLAVEE-------CDVILFVTDGRAGLTSADEAVAGLLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + K+D + + + + L + EV+P S+ G+ L +A+ Sbjct: 109 KSGKPVVVAANKLD--NASDSMQALSG-----EFFRMGLGEVMPLSAEHALGVPQLVEAV 161 Query: 207 LETI 210 L+ + Sbjct: 162 LDRL 165 >gi|17227979|ref|NP_484527.1| GTP-binding protein EngA [Nostoc sp. PCC 7120] gi|26006724|sp|Q8YZH7|DER_NOSS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|17129828|dbj|BAB72441.1| GTP binding protein [Nostoc sp. PCC 7120] Length = 453 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVP 73 ++ +P + L + +IA GR NVGKSSL+N + + S G T+ ++ F+ Sbjct: 162 IKHLPPVTELEENNEIKIAIIGRPNVGKSSLLNAFAGEERV-IVSPISGTTRDAIDTFIE 220 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +D N L+D G ++ + + I R V L+ID G Sbjct: 221 RDGQN-------YRLIDTAGIRKKKSIDYGTEFFS--INRAFKAIRRADVVLLVIDALDG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + DQ + + + + +V+ K D + + + R + T + I S+ Sbjct: 272 VTEQDQKLAGRILDEGKACVVVVNKWDAVEKDSYTIYDYEKNLEARLHFTEWADTIYVSA 331 Query: 194 VKRKGIEVLRKAILET 209 V + +E + + + + Sbjct: 332 VTGQRVEKILELVTKA 347 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 19/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L+N L + A + PG T+ + + + Sbjct: 2 GLPIVAIIGRPNVGKSTLVNRLAGEQT-AIVHDEPGVTRD------RTYLPAYWSDREFQ 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G + + L+ +++ + G D+++ +L + Sbjct: 55 VVDTGGLVFNDDTEFLPLIRQQA----LAALHEASAAIFVVNGQTGPNSADEEIAEWLRQ 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + V + + K + + Q + + E P S++ G L ++ Sbjct: 111 QPVPVFLAVNKCESPDQGSIQAS--------EFWELGLGEPYPISAIHGNGTGELLDELI 162 Query: 208 ETI 210 + + Sbjct: 163 KHL 165 >gi|194365440|ref|YP_002028050.1| GTP-binding protein EngA [Stenotrophomonas maltophilia R551-3] gi|238693498|sp|B4SSW8|DER_STRM5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|194348244|gb|ACF51367.1| small GTP-binding protein [Stenotrophomonas maltophilia R551-3] Length = 465 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 77/182 (42%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS++ N L ++ A + PG T+ N+ V + + + Sbjct: 2 LPLVALVGRPNVGKSTIFNALTRTRD-ALVHDQPGVTRDRNYGVCRLDEDNH-----FLV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ G + + + + ++D R G +D ++ ++L K Sbjct: 56 VDTGGI-----AEEEEGLAGATTRQARAAAAEADLILFVVDARDGSSAMDDEILAWLRKL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +++ KID + + + E++ S+ R+G++ L + +++ Sbjct: 111 SRPTLLLINKIDGTDEDSVRSEFARY---------GFSEMLTVSAAHRQGLDDLLEEVVQ 161 Query: 209 TI 210 + Sbjct: 162 RL 163 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKS+L+N ++ + + S+ PG T+ +L+ + Sbjct: 175 DPNRIRIAFVGRPNVGKSTLVNRILGEERM-IASDVPGTTRDSI------AVDLERDGRE 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +V+ + + L++D GV D V + Sbjct: 228 YRLIDTAGLRRRSRVDEVVEKFS--VVKTMQSIEQCQVAVLMLDATEGVTDQDATVLGAV 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D L+ ++ +T +R E + S+ G+ L +A Sbjct: 286 LDAGRALVIAINKWDGLTEYQREQA--ETMLSLRLGFVPWAESVRISAKHGSGLRELFRA 343 Query: 206 I 206 + Sbjct: 344 V 344 >gi|253576082|ref|ZP_04853414.1| GTP-binding protein Era [Paenibacillus sp. oral taxon 786 str. D14] gi|251844425|gb|EES72441.1| GTP-binding protein Era [Paenibacillus sp. oral taxon 786 str. D14] Length = 300 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ V + + +D Sbjct: 11 VAIVGRPNVGKSTLMNHIIGQK-IAIMSDKPQTTRNKIHGVYT------SEEMQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG K+ + L+ + V L+D G+ D+ + L Sbjct: 64 PGIH-----KRQSKLGDYMNTTALNTLGEVEAVLFLVDAAEGLGGGDRFIIERLKDVRTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +VL KID++ P +E+ L YP E++P S++ + L + I + + Sbjct: 119 VILVLNKIDRVEPEQLLPLIEEYSKL---YP--FSEIVPISAMLGNNVNRLLEQIGKYL 172 >gi|325661996|ref|ZP_08150615.1| GTP-binding protein engA [Lachnospiraceae bacterium 4_1_37FAA] gi|331085846|ref|ZP_08334929.1| GTP-binding protein engA [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471659|gb|EGC74878.1| GTP-binding protein engA [Lachnospiraceae bacterium 4_1_37FAA] gi|330406769|gb|EGG86274.1| GTP-binding protein engA [Lachnospiraceae bacterium 9_1_43BFAA] Length = 442 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 13/180 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA G+ NVGKSS+IN LV + SN G T+ + + N Sbjct: 177 RPRIAIVGKPNVGKSSIINKLVGENRV-IVSNIAGTTRDAI------DTEITWNGKEYVF 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 230 IDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDAVEGVTEQDAKIAGIAHER 287 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 I++ K D + +T+ + + +R + P E++ S+ + + L I Sbjct: 288 GKGVIIIVNKWDAIEKND--KTMYEYEKNVRQVLSYMPYAEIMYVSAKTGQRLPKLFDMI 345 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 63/178 (35%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ + PG T+ + L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNALAGE-MISIVKDTPGVTRDRIYAEVTWLD------REFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + T + + D R G++ D V L + Sbjct: 57 DTGGI----EPDSKDIILAQMREQAQIAIDTADVIIFITDVRQGLQDSDSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D + Q+ + Y + IP S+ R G+ + A+ Sbjct: 113 KPVVLVVNKVD-----SFQKLMADVYEF---YNLGIGDPIPISASSRLGLGDMLDAVA 162 >gi|226939618|ref|YP_002794691.1| GTP-binding protein engA [Laribacter hongkongensis HLHK9] gi|226714544|gb|ACO73682.1| GTP-binding protein engA [Laribacter hongkongensis HLHK9] Length = 415 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 73/181 (40%), Gaps = 13/181 (7%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+ A GR NVGKS+L+N ++ + + + PG T+ + + + ++ Sbjct: 132 PKFAIIGRPNVGKSTLVNAILGEERV-IAFDHPGTTRDSIYI------DFEREGKTYTII 184 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++++ + +V+ L L++D V D + F + Sbjct: 185 DTAGVRRRAKIDESIEKFS--VVKTLQAIEDANVCVLVLDAALDVSDQDATLAGFALEAG 242 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-YPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D ++ + + + R + + S++K +G+ L K+I + Sbjct: 243 RALVVAVNKWD---DCDEEQRINIKRSIARKLHFLEFAKYHYISALKGQGVADLFKSIDQ 299 Query: 209 T 209 Sbjct: 300 A 300 Score = 61.3 bits (148), Expect = 8e-08, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 13/128 (10%) Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + +VD G+ + + L V L+D R G+ D+ Sbjct: 3 RVGGKPYLVVDTGGFEPVVDSG----IMHEMARQTLQAVDEADAVIFLVDARAGLTPQDK 58 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + L + +V+ K E + + + Y E S +G+ Sbjct: 59 IIANQLRQIGRPVFLVVNKA---------EGMSRAMVVAEFYELGLDEPWSISGAHGEGV 109 Query: 200 EVLRKAIL 207 L +L Sbjct: 110 RELMDEVL 117 >gi|297626315|ref|YP_003688078.1| GTP binding protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922080|emb|CBL56648.1| GTP binding protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 449 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 23/186 (12%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ P +A GR NVGKS+L+N ++ R+ A + PG T+ + Sbjct: 10 QSTRPVVAVVGRPNVGKSTLVNRILGRRE-AVVQDTPGVTRDRVSYDANWAG------RE 62 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-RCVYLLIDCRHGVKQIDQDVFSF 144 LVD G+ + I L V ++D + G+ D+ V Sbjct: 63 FVLVDTGGWI------AKAEGMSAHIAEQAEMAIQLADAVLFVVDAKVGLTDEDEAVVKV 116 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + K+D E +E + + E P S++ +G L Sbjct: 117 LRRSGKPVVLAANKVD-------DERVEAEASSL--WQLGLGEPYPVSALHGRGSGDLLD 167 Query: 205 AILETI 210 A+++ + Sbjct: 168 ALVKVL 173 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 71/195 (36%), Gaps = 13/195 (6%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 E + GP +A G+ NVGKSSL+N L + + + S+ G T Sbjct: 176 TSAVEPDEV--GGPHRVAIVGKPNVGKSSLLNRLASAQR-SVVSDVSGTTVDPV------ 226 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + L+D G + + L + ERS ++ID + Sbjct: 227 DELVTIAGEPFRLIDTAGIRKRVKEASGSEYYAWLRTQAAIERSE--VCVVVIDASEPIS 284 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + S +++ + + K D L+ L + P V S++ Sbjct: 285 DQDLKILSSVEEAGRAMVVAFNKWD-LTDEERHRYLGREIEQDLQTWKWAPTV-NISALT 342 Query: 196 RKGIEVLRKAILETI 210 + ++ + KA+ +++ Sbjct: 343 GRNVDKIAKAVNKSL 357 >gi|281421766|ref|ZP_06252765.1| ribosome-associated GTPase EngA [Prevotella copri DSM 18205] gi|281404261|gb|EFB34941.1| ribosome-associated GTPase EngA [Prevotella copri DSM 18205] Length = 437 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P A GR N GKSS+IN + + G T+ + F Sbjct: 172 EEDIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRYDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVSEDLEFYSVM--RSIRAIENSDVCILMLDATRGIETQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 K S +V+ K D + Q+ ++ + IR P +I S++ ++ I Sbjct: 283 QKNNKSLVVVVNKWDLVEEKN-QKVIDTFENAIRKRMAPFVDFPIIFASALTKQRI 337 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 61/179 (34%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QSRRAIVSDTAGTTRDRQY------GKCSWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V L+D G+ D+DV L + + Sbjct: 58 GG----WVVKSDDIFEDAIRKQVLVATEEADLVLFLVDVNTGLTDWDEDVALILRRAKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y + S+ G L IL+ + Sbjct: 114 VILVANKVD---------NSAEYYQAAEFYKLGLGDPQCISAATGGGTGDLLDMILDKL 163 >gi|218132942|ref|ZP_03461746.1| hypothetical protein BACPEC_00803 [Bacteroides pectinophilus ATCC 43243] gi|217991815|gb|EEC57819.1| hypothetical protein BACPEC_00803 [Bacteroides pectinophilus ATCC 43243] Length = 322 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 17/180 (9%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKS+L+N ++ +K +A TSN P T++ V D + + +D P Sbjct: 30 AIIGRPNVGKSTLMNRIIGQK-IAITSNKPQTTRNRIQTVYTD------DRGQIVFLDTP 82 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G A+ ++ + V L++ + D+ + L K Sbjct: 83 GIHKAKN-----KLGEYMVGAAEKTIDEVDLVLWLVEPSSFIGAGDEHILEKLSKVKSPV 137 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETINY 212 +V+ KID + + + K + E++P S+ G + L I + + Y Sbjct: 138 VLVINKIDTIKKEEVLPVIAEYKNKM-----DFAEIVPISAYDGTGTDDLVDVIFKYMPY 192 >gi|121604778|ref|YP_982107.1| GTP-binding protein EngA [Polaromonas naphthalenivorans CJ2] gi|166225835|sp|A1VNF8|DER_POLNA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|120593747|gb|ABM37186.1| small GTP-binding protein [Polaromonas naphthalenivorans CJ2] Length = 445 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++A +GR NVGKS+LIN + + L + PG T+ ++ Sbjct: 176 DPAVIKLAVAGRPNVGKSTLINTWLGEERLV-AFDLPGTTRDAI------SVPFEHAGQK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L V LL+D GV D + ++ Sbjct: 229 FELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIENANVVLLLLDATQGVTDQDAHIAGYI 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + + K D + + + + + S++KR+G+ + K+ Sbjct: 287 LESGRAVVLAVNKWDAVDAYQRELLQRSIETRLG--FLKFASIHHISAIKRQGLGPVWKS 344 Query: 206 ILET 209 I++ Sbjct: 345 IIQA 348 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ G T+ + + N K ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLTKTRD-AIVADFAGLTRD------RHYGNGKLGPHEYIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + + + V ++D R G+ D D+ ++L K Sbjct: 56 DTGGFEPDAVTG----IYKEMARQTRQAVAESDVVIFVVDARAGISAQDYDIANYLRKLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + K + L T + + E++ S+ +G+ +L L Sbjct: 112 KPTVLAANKAEGLPEGTQ---------VSEFFELGLGEMLAVSASHGQGMRMLVDLALAP 162 Query: 210 IN 211 +N Sbjct: 163 LN 164 >gi|150390617|ref|YP_001320666.1| small GTP-binding protein [Alkaliphilus metalliredigens QYMF] gi|166920095|sp|A6TS39|DER_ALKMQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|149950479|gb|ABR49007.1| small GTP-binding protein [Alkaliphilus metalliredigens QYMF] Length = 440 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++A G+ NVGKSS++N ++ + S+ G T+ + + Sbjct: 173 DDDVIKVAIIGKPNVGKSSIVNSILGENRV-IVSDIAGTTRDAI------DTPFNDGEDQ 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+N++ + ++R ++ L+ID GV + D V F Sbjct: 226 YVLIDTAGLRRKSKIKENIEKYS--VIRSIAAVERADVCLLVIDATEGVTEQDTKVAGFS 283 Query: 146 DKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + T + +++ + + ++ ++ S++ R+ + + Sbjct: 284 HENGKGTIIVVNKWDLIEKDNNTMNKFIKEIRTELAYL--SYAPILFISALTRQRMPKVL 341 Query: 204 KAI 206 + + Sbjct: 342 ETV 344 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N ++ + ++ + PG T+ + ++ + L + Sbjct: 4 PIVAIVGRPNVGKSTLFNKIIGHR-ISIVEDQPGVTRDRIYAEV-EWLDHYFTLIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D P + + I T ++D R G+ D++V L K Sbjct: 62 DADTEEI--IPAQMREQAQLAIE-------TADVTVFMVDGRAGLTTSDREVAEMLRKSH 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D T + Y + I SS + GI L I++ Sbjct: 113 KPVLLAMNKVD---------TSNRLDSFYEFYELGIGDPIEISSAQGLGIGDLLDEIVKH 163 >gi|15894988|ref|NP_348337.1| GTP-binding protein EngA [Clostridium acetobutylicum ATCC 824] gi|26006729|sp|Q97ID7|DER_CLOAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|15024676|gb|AAK79677.1|AE007680_10 Predicted GTPase [Clostridium acetobutylicum ATCC 824] gi|325509125|gb|ADZ20761.1| GTP-binding protein EngA [Clostridium acetobutylicum EA 2018] Length = 438 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 80/184 (43%), Gaps = 15/184 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVPKDFSNLKNNLPAMALV 89 +IAF G+ NVGKSSL N ++ + + S+ PG T+ ++ F+ DF + L+ Sbjct: 178 KIAFVGKPNVGKSSLTNRILGEERV-IVSDIPGTTRDAIDSFLETDFG-------KLVLI 229 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K+ ++ + VR ++ L++D + + D+ + + + Sbjct: 230 DTAGLRRKSRIKEEIERYSA--VRTMAAIERCDVCTLILDATEPISEQDERIIGYAHENN 287 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKY--LIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + +++ K D + +T+E K ++ A+ + S+ + + + I Sbjct: 288 KAILVIVNKWDLIEKDD--KTMENFKKNLEMKFSFMAYAPFLFISAKTGQRVHKVLSEIK 345 Query: 208 ETIN 211 + + Sbjct: 346 KCYD 349 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GR NVGKS+L N L K ++ + PG T+ + + + ++ Sbjct: 4 PLVTIVGRPNVGKSTLFNKLAG-KRVSIVEDTPGVTRDRIY------AESEWVGKKFTII 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ N + + + ++D + G+ D +V L K Sbjct: 57 DTGGI----EPENNDIILTQMRRQAQIAIEMSDVIIFMVDGKQGLTDTDNEVAIMLRKSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KIDK +E + Y + + SS + GI + ++ Sbjct: 113 KPIVLVVNKIDK----NVEEN-----NIYEFYNLGIGDPVSISSSQGLGIGDMLDEVVNK 163 >gi|88810613|ref|ZP_01125870.1| GTP-binding protein EngA [Nitrococcus mobilis Nb-231] gi|88792243|gb|EAR23353.1| GTP-binding protein EngA [Nitrococcus mobilis Nb-231] Length = 476 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 11/171 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ + + + PG T+ F + + A L+D Sbjct: 185 VAIVGRPNVGKSTLINRLLGEERV-LVHDQPGTTRDSIFI------PFERDGFAYTLIDT 237 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + + + L + + V LL+D + + D + ++ + Sbjct: 238 AGMRRRSRVYEAVEKFSAI--KTLQAVTAAQVVILLLDAHESITEQDVRIIGYVLDAGRA 295 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + K D L P+ ++ + + A ++ S++ G+ +L Sbjct: 296 LVLAVNKWDGLEPSRREQIRRGLERKLGFLDFA--KLYFISALYGTGVGLL 344 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 62/179 (34%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I GR NVGKS+L N L ++ A ++ P T+ + + A +V Sbjct: 3 PVIVLVGRPNVGKSTLFNCLTRSRD-ALVADFPELTRDRQY------GRGRIGPCAYIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G G+ + + V L+D R G D+ + L + Sbjct: 56 DTGGMGQGNGAISE-----GVQAQARQAIAQADAVLFLVDARSGPTAADEALAGELRAQG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D L Y + P ++ G+ L ++L+ Sbjct: 111 KQLFLVPNKVDGLDARVVAA---------DFYTLGLGDPHPIAAAHGTGVARLMASVLQ 160 >gi|188997612|ref|YP_001931863.1| GTP-binding protein Era [Sulfurihydrogenibium sp. YO3AOP1] gi|188932679|gb|ACD67309.1| GTP-binding protein Era [Sulfurihydrogenibium sp. YO3AOP1] Length = 307 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ K L+ S P T+ V + +D Sbjct: 15 VAIVGRPNVGKSTLLNNIIGTK-LSIVSPRPQTTRMRILGV------KHLPDAQIIFLDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFS-FLDKKA 149 PG D ++ + +S + + ++ID G + D+++ +L K Sbjct: 68 PGVQKGG------DLLTKSVMEFVISGIESADVILMVIDAETGWTKEDKEIVENYLKKVD 121 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + KIDK+ +E++ + E +P S++K I+ L + I + Sbjct: 122 KPAILAINKIDKIKRDLVLPLIEESTKI-----YDFKEFVPISAIKNLNIDELIETIKKY 176 Query: 210 I 210 + Sbjct: 177 L 177 >gi|187478830|ref|YP_786854.1| GTP-binding protein EngA [Bordetella avium 197N] gi|115423416|emb|CAJ49950.1| GTP-binding protein [Bordetella avium 197N] Length = 451 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 11/179 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 ++A GR NVGKS+LIN L+ + + + PG T+ + + Sbjct: 183 HRIKLAIVGRPNVGKSTLINTLMGEERV-IAFDMPGTTRDAIEI------EFERDGRQYT 235 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G + V+ + +++ L V L++D + + + D + F+ + Sbjct: 236 LIDTAGLRKRGKVFEAVEKFS--VIKTLQAIEASNVVLLMLDAQSEISEQDAHIAGFVLE 293 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K D L + + + +R + S++K +GI L K++ Sbjct: 294 TGRAVVVAINKWDGLDDDQRERIEREFQRKLR--FLTFARMHTISALKGQGIRPLLKSV 350 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 22/183 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L R A ++ G T+ + + + ++ Sbjct: 5 PVVALVGRPNVGKSTLFNRLT-RSRAALVADYSGLTRD------RHYGEGRVGDIPFIVI 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + + V L+D R G+ D ++ L K Sbjct: 58 DTGGFEPVAKDG----ILAEMARQTRQAIAEADVVVFLVDARAGINAHDHEIARLLRKSG 113 Query: 150 -VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG-IEVLRKAIL 207 + + K E + + K + E P S+ G ++++ A+ Sbjct: 114 QQRVLLAVNKA---------EGMNEGKATSDFFELGLGEPHPISAAHGDGVVDLIESALA 164 Query: 208 ETI 210 + + Sbjct: 165 DLV 167 >gi|78217514|gb|ABB36863.1| GTP-binding protein EngA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 475 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 70/188 (37%), Gaps = 14/188 (7%) Query: 19 PEIGLLPKAG---PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 PE P+ P ++A GR N GKSSL+N L + + S+ G T+ Sbjct: 195 PEDEDAPQEEEERPLKLAMLGRPNAGKSSLVNALSGSRRM-IVSDVAGTTRDSVDIAV-- 251 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD G + V+ + + L + +++D G+ Sbjct: 252 ----ELGGRRYVFVDTAGVRRRAKIQDPVERYS--VNSSLKSTTKADVTLVVLDAVEGLT 305 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 Q D+ + LD++ + +V+ KID + + H ++ S+ Sbjct: 306 QQDKRLIDLLDERKTPFMLVINKIDLVPRDGLTALKRLYDDAL--TFCKHVPIMYISARS 363 Query: 196 RKGIEVLR 203 +G++ L Sbjct: 364 GRGVDKLL 371 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 22/188 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P+IA GR NVGKS+L N L+ R N A T + PG T+ + +K + Sbjct: 22 LPKIALIGRPNVGKSTLFNRLI-RSNRAITHDRPGVTRD------RMEGYVKVGDRKFII 74 Query: 89 VDMPGYGY------ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +D G A P + ++ + + + L++D R G+ D+ + Sbjct: 75 IDTGGITLDEHAAVAEGPDELRGFEAEILRQTEEAIADSVALCLVVDGREGLTPFDESLA 134 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ K + + K+D E + + T VIP S + Sbjct: 135 AYVRKSGKPVLLAVNKVD---------GEEMADLYMAEFHTLGFPVIPLSGAHGFNVRAF 185 Query: 203 RKAILETI 210 + + + Sbjct: 186 SGELFDLL 193 >gi|331081965|ref|ZP_08331093.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA] gi|330405560|gb|EGG85090.1| GTP-binding protein engA [Lachnospiraceae bacterium 6_1_63FAA] Length = 441 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P+IA G+ NVGKSSLIN ++ + SN G T+ + + Sbjct: 174 EDEIPKIAVVGKPNVGKSSLINKILGEDRV-IVSNIAGTTRDAI------DTKVTYQGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ V ++ID GV + D + Sbjct: 227 YTFIDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVVMMIDATEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 + I + K D + +T+ K +R + P E++ S+ + I L Sbjct: 285 HDRGKGVVIAVNKWDAIEKND--KTIYKFTNKVRETLSYMPYAEIMFISAHTGQRIPKLF 342 Query: 204 KAI 206 + I Sbjct: 343 ETI 345 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 19/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K ++ + PG T+ + ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEK-ISIVKDTPGVTRDRIYAEVTWLDK------TFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ N + + T + + D R G+ D V L + Sbjct: 57 DTGGI----EPESNDVILSQMREQAQIAIDTADVIIFMTDVRQGLVDADSKVADMLRRSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + Q+ + T Y E +P S+ G+ + + ++E Sbjct: 113 KPVVLVVNKVD-----SFQKFMMDTYEF---YNLGIGEPVPISAASMLGLGDMLEKVVEH 164 Query: 210 IN 211 + Sbjct: 165 FD 166 >gi|307267081|ref|ZP_07548594.1| ribosome-associated GTPase EngA [Thermoanaerobacter wiegelii Rt8.B1] gi|306917912|gb|EFN48173.1| ribosome-associated GTPase EngA [Thermoanaerobacter wiegelii Rt8.B1] Length = 439 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 19/196 (9%) Query: 21 IGLLPKAGP------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + LP+ +IA G+ NVGKSSL+N ++ + + SN PG T+ Sbjct: 162 VKKLPQEELEYTEETIKIAVIGKPNVGKSSLVNKILGEERV-IVSNIPGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + L+D G ++++ + L ERS + L+ID G Sbjct: 216 -DTPFSKDGKNYVLIDTAGIRRKSRISESIERYSVLRALAAIERSDI--CLLMIDATEGP 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + IV+ K D + T E + + + + ++ S Sbjct: 273 TEQDTKIAGYAFENGKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLS--FISFAPILFIS 330 Query: 193 SVKRKGIEVLRKAILE 208 + + + + + + + Sbjct: 331 AKTGQRVHRVLETVDK 346 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 25/182 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L N ++ K ++ + PG T+ + N + LVD Sbjct: 6 VSIVGRPNVGKSTLFNKIMG-KRISIVEDKPGVTRDRIY------GNAEWLDKKFILVDT 58 Query: 92 PGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G K I + L+D + G+ D+++ + L + Sbjct: 59 GGLDPNAEDILFSKVRLQVEAAIDAS-------DVILFLVDAKEGLMPEDEEIANILRRA 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D E + IP S+ GI L +++ Sbjct: 112 KKEVILVCNKVDSFK--------EMPPTYYDFFSLGLGNPIPISASNGLGIGELLDEVVK 163 Query: 209 TI 210 + Sbjct: 164 KL 165 >gi|308050453|ref|YP_003914019.1| ribosome-associated GTPase EngA [Ferrimonas balearica DSM 9799] gi|307632643|gb|ADN76945.1| ribosome-associated GTPase EngA [Ferrimonas balearica DSM 9799] Length = 495 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 78/194 (40%), Gaps = 15/194 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 + LP ++A G+ NVGKS+L N ++ + + + PG T+ + Sbjct: 199 AERLRALP----IKLAIIGKPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 247 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G ++ + V+ + +++ L V L++D R G+ Sbjct: 248 PMERDGREYVLIDTAGVRRRKSVYEAVEKFS--VIKTLQAIEDANVVLLVVDAREGLSDQ 305 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + F + + + K D L T ++ + + ++ S++ Sbjct: 306 DLSLLGFTLNAGRALVVAVNKWDGLDMTVKEDIKRELDRRLG--FIDFAKLHFISALHGT 363 Query: 198 GIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 364 GVGHLFESVQEAYD 377 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTGTRD-ALVADFPGLTRDRKYGQANLAG------HDFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L V L+D R G+ D+ + L + Sbjct: 55 VDTGGI---DGTEEGIET--KMAEQSLRAIEEADVVLFLVDARAGLTAADEAISKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V K D + A + Y + E+ ++ + +G+ L Sbjct: 110 EKRTLLVANKTDGIDADAA---------VGEFYALGYGEIHQIAAAQNRGVSSL 154 >gi|323342077|ref|ZP_08082310.1| ribosome-associated GTPase EngA [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464502|gb|EFY09695.1| ribosome-associated GTPase EngA [Erysipelothrix rhusiopathiae ATCC 19414] Length = 436 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 19/196 (9%) Query: 21 IGLLPKAGPP----EIAF--SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 I LP+ G E++F GR NVGKSSL+N ++N+ + SN G T+ Sbjct: 160 IKKLPQDGITMYEDELSFCAIGRPNVGKSSLVNAMLNQDRV-IVSNIEGTTRDAI----- 213 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + N ++D G ++V+ + L +RS V LID G+ Sbjct: 214 -DTPFRMNERDYVIIDTAGIRKRGKVYEDVEKYSVLRAMSAIDRSD--VVLFLIDGEAGI 270 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTS 192 + D+ V F + IV K D + +E K +IR+ ++ ++ S Sbjct: 271 RAQDKHVVGFAHEAGKPIIIVYNKWDVVDKEET--AMEDVKKVIRSEFMYLSYAPIVFVS 328 Query: 193 SVKRKGIEVLRKAILE 208 ++ RK + L I + Sbjct: 329 ALTRKRVHTLIPLIED 344 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 59/179 (32%), Gaps = 21/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N ++ + ++ + G T+ + + + +D Sbjct: 6 VAIVGRPNVGKSSLFNRIMGER-ISIVHDEAGVTRDRLYGKTTWLTK------DLRFIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G P + I + ++ + G+ D+ + L + Sbjct: 59 GGIQMEGQPFQEEIKMQVDI-----AIDEADIILFVVSAKEGMTTDDEFIARLLRQTNKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I K+D ++ + Y + E S G+ L +++ + Sbjct: 114 VIIAANKVD---------DVQFVSDIYEFYALGYDEPFAVSCEHGIGLGDLLDEVIKKL 163 >gi|75908210|ref|YP_322506.1| tRNA modification GTPase TrmE [Anabaena variabilis ATCC 29413] gi|123758831|sp|Q3MBM5|MNME_ANAVT RecName: Full=tRNA modification GTPase mnmE gi|75701935|gb|ABA21611.1| tRNA modification GTPase trmE [Anabaena variabilis ATCC 29413] Length = 463 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 23/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N ++ + A ++ PG T+ + S L + ++D Sbjct: 227 KVAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDVV------ESQLVVGGIPVQVLD 279 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G + R +T V L ID G DQ+++ + + Sbjct: 280 TAGI---RETSDQVEKIG--VERSRQAANTADLVLLTIDAATGWTTGDQEIYEQVKHR-- 332 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + YP +++ T++ +++GI+ L AILE + Sbjct: 333 PLILVMNKIDLVDKKLITSL---------EYPKNITQIVHTAAAQKQGIDALETAILEIV 383 >gi|114569754|ref|YP_756434.1| small GTP-binding protein [Maricaulis maris MCS10] gi|114340216|gb|ABI65496.1| small GTP-binding protein [Maricaulis maris MCS10] Length = 490 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 69/185 (37%), Gaps = 20/185 (10%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A P IA GR NVGKS+L N L K LA + PG T+ ++ +LP + Sbjct: 3 AHLPRIAVVGRPNVGKSTLFNRLAG-KPLAIVDDRPGVTRDR-----REARGRLGDLP-L 55 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D GY + + + + + LLID R GV +D + Sbjct: 56 LLIDTAGYDDSEKDGLDAE----MRTQTEMAIHDADLCLLLIDARAGVTPLDVVFADVIR 111 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + ++ K E LI + E I S+ GI L A+ Sbjct: 112 RSGKPVLLLANKC---------EGKAGESGLIDAFELGMGEPIAFSAAHGAGIGDLYDAV 162 Query: 207 LETIN 211 + T+ Sbjct: 163 VHTLG 167 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 14/187 (7%) Query: 26 KAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 PP IA GR N GKS+LIN L+ + L T G T+ + + Sbjct: 180 DGDPPLRIAVIGRPNAGKSTLINTLIGEERL-ITGPEAGITRDAI------SVDWVWDGR 232 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + L D G ++ L V LL+D H +++ D + Sbjct: 233 RVRLHDTAGLRKRGKVADRLERMSA--ADTLRAVKFAEVVLLLMDAEHPLEKQDLHLADM 290 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVL 202 K+ + I ++K+D + + L++ + V+P S++K+KG++ + Sbjct: 291 AYKEGRAVAIAVSKMDLVP--NREAYLKEIRLEFERLLPQMTGAPVLPMSALKKKGLDAI 348 Query: 203 RKAILET 209 + + Sbjct: 349 MPTLAKL 355 >gi|46447114|ref|YP_008479.1| hypothetical protein pc1480 [Candidatus Protochlamydia amoebophila UWE25] gi|81697623|sp|Q6MB45|DER_PARUW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|46400755|emb|CAF24204.1| conserved hypothetical protein [Candidatus Protochlamydia amoebophila UWE25] Length = 487 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 15/180 (8%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNNLPAMAL 88 ++A GR+NVGKSSL+N L++ S PG T+ F KD L Sbjct: 179 KVAIVGRANVGKSSLVNYLLDEDR-CIVSPIPGTTRDSVDISFTHKDEC--------YTL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G RA + VD + + ER+ L L++D + G+ D+ + + +++ Sbjct: 230 IDTAGIRRKRAEHEVVDKFAAIRTERAIERADL--CVLMLDVQEGITAQDKKIANTIEEA 287 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 I+L K D + + L+ + + I TS+ + I+ L I E Sbjct: 288 GQGCIILLNKWDLVQGFRMEHCLQNLEEEVPFLRHCPK--IFTSAKTGRNIDKLFPLIQE 345 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 22/185 (11%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P++A GR NVGKS+L N + +K +A A G T+ + + F Sbjct: 2 THLPKLAIVGRPNVGKSALFNRICKQK-IAIVDEAEGITRDRLYAEGELFGLH------F 54 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + I R + ++D G+ ++D++V L Sbjct: 55 QVIDTGGI-----NARSKEVFNEEIKRQAEIAIEEADTIVQVVDAHVGLTELDKEVARVL 109 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + KID LS T+ + ++IP S+ + I L + Sbjct: 110 LRTKKPVCLAVNKIDNLSQTSLMHQF---------HSLGIKQMIPVSAAQGWQIAELLET 160 Query: 206 ILETI 210 E I Sbjct: 161 AFEKI 165 >gi|258511668|ref|YP_003185102.1| ribosome-associated GTPase EngA [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478394|gb|ACV58713.1| ribosome-associated GTPase EngA [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 444 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 22/183 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR+NVGKS+L N LV R+ ++ + PG T+ + + N + Sbjct: 3 LPVVAIVGRANVGKSTLFNRLVGRR-VSIVEDTPGVTRDRIY------GKSEWNGVPFRV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLI-VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G D G LI V+ + ++D R GV Q D+ V L + Sbjct: 56 IDTGGIEM-----DEEDEMGNLIRVQAQIAIDEADVILFVVDGRQGVTQADEHVAQVLRR 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D +E+ Y E IP S+ +G L A++ Sbjct: 111 AHKPVVLGVNKLD---------HVEQHALSYEFYRLGFGEPIPFSAEHGQGTGDLLDAVV 161 Query: 208 ETI 210 + Sbjct: 162 AAL 164 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 9/187 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKSSL+N L+ + + S G T+ + L+ + Sbjct: 173 DEDAIRIAFIGRPNVGKSSLVNRLLGEERVM-VSPVAGTTRDAV------DTPLERDGQT 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G + ++ + L R L ++++D + G+ + D+ V + Sbjct: 226 YMLVDTAGMRRKGKVYERIEKYSVL--RALRALDRADVAFVVLDAQTGIVEQDKRVAGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + V+ K D + + K VI S++ + + L Sbjct: 284 LDAGCAIAFVVNKWDAIEKDDKTAHRFEEKIRDEFPFLRFAPVIFVSALTGQRVSRLLDV 343 Query: 206 ILETINY 212 E Y Sbjct: 344 AKEIAEY 350 >gi|121598397|ref|YP_993149.1| GTP-binding protein EngA [Burkholderia mallei SAVP1] gi|217421388|ref|ZP_03452892.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576] gi|237812544|ref|YP_002896995.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei MSHR346] gi|238563546|ref|ZP_00438709.2| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4] gi|242314802|ref|ZP_04813818.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b] gi|251767656|ref|ZP_02268028.2| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20] gi|254197870|ref|ZP_04904292.1| GTP-binding protein EngA [Burkholderia pseudomallei S13] gi|254199946|ref|ZP_04906312.1| GTP-binding protein EngA [Burkholderia mallei FMH] gi|254206279|ref|ZP_04912631.1| GTP-binding protein EngA [Burkholderia mallei JHU] gi|52426961|gb|AAU47554.1| GTPase family protein [Burkholderia mallei ATCC 23344] gi|76581515|gb|ABA50990.1| GTPase family protein [Burkholderia pseudomallei 1710b] gi|121227207|gb|ABM49725.1| GTPase family protein [Burkholderia mallei SAVP1] gi|147749542|gb|EDK56616.1| GTP-binding protein EngA [Burkholderia mallei FMH] gi|147753722|gb|EDK60787.1| GTP-binding protein EngA [Burkholderia mallei JHU] gi|169654611|gb|EDS87304.1| GTP-binding protein EngA [Burkholderia pseudomallei S13] gi|217395130|gb|EEC35148.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 576] gi|237503777|gb|ACQ96095.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei MSHR346] gi|238520490|gb|EEP83949.1| ribosome-associated GTPase EngA [Burkholderia mallei GB8 horse 4] gi|242138041|gb|EES24443.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106b] gi|243062055|gb|EES44241.1| ribosome-associated GTPase EngA [Burkholderia mallei PRL-20] Length = 460 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 +IA GR NVGKS+L+N L+ + + PG T+ + + + N L Sbjct: 194 GIKIAIVGRPNVGKSTLVNTLIGEDRV-IAFDMPGTTRDSIY------VDFERNGKHYTL 246 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 247 IDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQ 304 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D L P + T ++ + S+ ++ GI L +++ + Sbjct: 305 GRALVVGVNKWDGLDPHVRERTKADLARKLK--FLEFAKFHFISAAEKTGIGALMRSVDD 362 Query: 209 T 209 Sbjct: 363 A 363 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 18 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGARPYLVV 70 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 71 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 126 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K E ++ T Y + S+ G+ + LE Sbjct: 127 RPIFLVVNKA---------EGMKYTAVASDFYELGLGDPRAISAAHGDGVNDMINEALE 176 >gi|167037254|ref|YP_001664832.1| GTP-binding protein EngA [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256752010|ref|ZP_05492879.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1] gi|320115673|ref|YP_004185832.1| ribosome-associated GTPase EngA [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687651|sp|B0K8N3|DER_THEP3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166856088|gb|ABY94496.1| small GTP-binding protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749120|gb|EEU62155.1| small GTP-binding protein [Thermoanaerobacter ethanolicus CCSD1] gi|319928764|gb|ADV79449.1| ribosome-associated GTPase EngA [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 439 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 19/196 (9%) Query: 21 IGLLPKAGP------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + LP+ +IA G+ NVGKSSL+N ++ + + SN PG T+ Sbjct: 162 VKKLPQEELEYTEETIKIAVIGKPNVGKSSLVNKILGEERV-IVSNIPGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + L+D G ++++ + L ERS + L+ID G Sbjct: 216 -DTPFSKDGKNYVLIDTAGIRRKSRISESIERYSVLRALAAIERSDI--CLLMIDATEGP 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + IV+ K D + T E + + + + ++ S Sbjct: 273 TEQDTKIAGYAFENGKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLS--FISFAPILFIS 330 Query: 193 SVKRKGIEVLRKAILE 208 + + + + + + + Sbjct: 331 AKTGQRVHRVLETVDK 346 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 64/182 (35%), Gaps = 25/182 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L N ++ K ++ + PG T+ + N++ LVD Sbjct: 6 VSIVGRPNVGKSTLFNKIMG-KRISIVEDKPGVTRDRIY------GNVEWLDKKFILVDT 58 Query: 92 PGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G K I + L+D + G+ D+++ + L + Sbjct: 59 GGLDPNAEDILFSKVRLQVEAAIDAS-------DVILFLVDAKEGLMPEDEEIANILRRA 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D E + IP S+ GI L +++ Sbjct: 112 KKEVILVCNKVDSFK--------EMPPTYYDFFSLGLGNPIPISASNGLGIGELLDEVVK 163 Query: 209 TI 210 + Sbjct: 164 KL 165 >gi|312898938|ref|ZP_07758326.1| ribosome-associated GTPase EngA [Megasphaera micronuciformis F0359] gi|310620100|gb|EFQ03672.1| ribosome-associated GTPase EngA [Megasphaera micronuciformis F0359] Length = 442 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 74/181 (40%), Gaps = 19/181 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +V +K ++ + PG T+ +F + + L+ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIV-KKRISIVEDLPGVTRDRIYF------DAEWLGREFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + + + + + + ++D + G++ DQ++ + L Sbjct: 57 DTGGIEF---VDSDNNIFTSMRYQAELAIHEADVILYVVDGKTGIQPQDQEIAAMLRASG 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ KID ++E+ + Y + I S+V + L +L Sbjct: 114 KPVILVVNKID---------SVEQEVNIYEFYGLGLGDPIGVSAVNLMNLGDLLDEVLSH 164 Query: 210 I 210 I Sbjct: 165 I 165 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 79/189 (41%), Gaps = 15/189 (7%) Query: 19 PEIGLLP----KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 I +P IA GR NVGKSSL N L+ ++ + S+ G T+ Sbjct: 163 SHIKEVPVQEDDESVVHIALVGRPNVGKSSLTNALLGKERV-IVSDMAGTTRDSI----- 216 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 ++ K++ L+D G V+ + +VR L L++D GV Sbjct: 217 -DTHWKHDGTEFVLIDTAGMRRKGKIDLPVERYS--VVRALRAIDRSDVAVLVLDGVEGV 273 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSS 193 + D+ + ++ + I++ K D ++ ++ +L T+ + R + V+ S+ Sbjct: 274 TEQDKKIAGYIHESGKGCIIIVNKWDLVTK-DSKTSLRYTEDIRRELAFLQYAPVLYASA 332 Query: 194 VKRKGIEVL 202 + + ++ L Sbjct: 333 LTHQRVDRL 341 >gi|260591202|ref|ZP_05856660.1| ribosome-associated GTPase EngA [Prevotella veroralis F0319] gi|260537067|gb|EEX19684.1| ribosome-associated GTPase EngA [Prevotella veroralis F0319] Length = 437 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P A GR N GKSS+IN + + G T+ + F Sbjct: 172 NEDIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRYTKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEFYSVM--RSIRSIENADVCILMLDATRGIESQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 + S +V+ K D + P Q+ ++ IR+ P +I S++ ++ I Sbjct: 283 QRNNKSLVVVVNKWDLV-PDKNQKVIDTFVNAIRSRMAPFVDFPIIFASALTKQRI 337 Score = 94.8 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 11/129 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QTRHAIVSDTAGTTRDRQY------GKCQWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V L+D GV D+DV L + + Sbjct: 58 GG----WVVKSDDVFEDAIRKQVLVATEEADLVLFLVDTETGVTDWDEDVAMILRRTKLP 113 Query: 152 YQIVLTKID 160 +V K+D Sbjct: 114 VLLVANKVD 122 >gi|171463406|ref|YP_001797519.1| small GTP-binding protein [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238689056|sp|B1XU78|DER_POLNS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|171192944|gb|ACB43905.1| small GTP-binding protein [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 454 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 71/177 (40%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +IA GR NVGKS+LIN L+ + + + PG T+ + N Sbjct: 177 PNRPMKIAVVGRPNVGKSTLINKLIGEERV-IAFDMPGTTRDAI------EVPFERNGKP 229 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G + ++ + +V+ L + V L++D + + + D + F+ Sbjct: 230 YILVDTAGLRRRGKVFEAIEKFS--VVKTLQAIADCNVVILMLDAQQDISEQDAHIAGFI 287 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + + K D + + + +R V P S+ K G++ L Sbjct: 288 VEAGRALVVAVNKWDGIDTYVKERARLEIAQKLRFLD--FANVHPISAKKGTGLKDL 342 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 29/185 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I GRSNVGKS+L N L ++ A ++ G T+ + + + A V Sbjct: 3 PVITIVGRSNVGKSTLFNRLTRSRD-ALVADFSGLTRD------RHYGKCRIGERAFICV 55 Query: 90 DMPGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + ++ V L+D R G+ D+ + FL Sbjct: 56 DTGGFEPVAKTGIVAEMAKQTKQVVAES-------DIVIFLVDGRLGMAPQDRVIADFLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + + K E ++ + + E P SS G+ R I Sbjct: 109 KTGRPVILAVNKT---------EGMQASVVTADFHELGLGEPFPISSAHGDGV---RGLI 156 Query: 207 LETIN 211 + ++ Sbjct: 157 DDALD 161 >gi|28378534|ref|NP_785426.1| GTP-binding protein EngA [Lactobacillus plantarum WCFS1] gi|254556748|ref|YP_003063165.1| GTP-binding protein EngA [Lactobacillus plantarum JDM1] gi|300767479|ref|ZP_07077391.1| ribosome-associated GTPase EngA [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180691|ref|YP_003924819.1| GTP-binding protein EngA [Lactobacillus plantarum subsp. plantarum ST-III] gi|37999659|sp|Q88VZ6|DER_LACPL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|28271370|emb|CAD64275.1| GTP-binding protein [Lactobacillus plantarum WCFS1] gi|254045675|gb|ACT62468.1| GTP-binding protein EngA [Lactobacillus plantarum JDM1] gi|300495298|gb|EFK30454.1| ribosome-associated GTPase EngA [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046182|gb|ADN98725.1| GTP-binding protein EngA [Lactobacillus plantarum subsp. plantarum ST-III] Length = 436 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 81/199 (40%), Gaps = 13/199 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ PE + G + GR NVGKSS++N L+ + S+ G T+ Sbjct: 160 IKNFPEKSGEDEPGTIRFSLIGRPNVGKSSIVNALLGEDRV-IVSDVAGTTRDAI----- 213 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + +VD G +N + + + R L +I+ G+ Sbjct: 214 DTKFTDQDGDRFVMVDTAGIRKKGKVYENTERYSVM--RALKAIDNSDVALFVINGEEGI 271 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTS 192 ++ D+ V + + IV+ K D + T+++ + IR+ ++ +I S Sbjct: 272 REQDKRVAGYAHEAGKGIIIVVNKWDLVKKD--NHTMQEFEAYIRDQFVYLSYAPIIFVS 329 Query: 193 SVKRKGIEVLRKAILETIN 211 + + +E L A+++ +N Sbjct: 330 AKTNQRLEQL-PALIKKVN 347 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N + ++ + PG T+ + +N + +L+ Sbjct: 4 PVVAIVGRPNVGKSTIFNRIAG-DRISIVEDTPGVTRDRIY------ANSEWLGQEFSLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G AP + I + L+ + GV D+ V L + Sbjct: 57 DTGGIDIEDAPFIKQITQQAEI-----AIDEADVIIYLVSIKEGVTDADEHVAQILYRSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D +P E + Y + P S G+ L A+++ Sbjct: 112 KPVVLGVNKVD--NPELRSEVYD-------FYSLGFGDPYPISGAHGLGLGDLLDAVIK 161 >gi|269792400|ref|YP_003317304.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100035|gb|ACZ19022.1| small GTP-binding protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 443 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 70/179 (39%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N L+ RK LA + PG T+ + + + + LVD Sbjct: 4 VAIVGRPNVGKSSLFNRLIGRK-LAIVEDIPGVTRDRLY------AETEWDGKRFYLVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A P D + L E V L+D + GV D+ + L + + Sbjct: 57 GGIESAS-PHPFQDVIARQVQMALKE---CDVVIFLLDGKEGVTAGDEAIAEMLRRSSKP 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KID +P L+ Y V+ S GI L +++ + Sbjct: 113 VIVAMNKID--NPKREDNVLDA-------YSLGFHTVMGISVEHGIGIGDLLDSVVSAL 162 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 76/190 (40%), Gaps = 17/190 (8%) Query: 21 IGLLPKAGPP--------EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 + LP G P +++ GR NVGKSSL N L+ ++ A S PG T+ Sbjct: 159 VSALPDEGEPDGTDDGVIKLSVVGRPNVGKSSLFNRLIGQER-AVVSPIPGTTRDTV--- 214 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 +++ + L+D G ++ + +VR L +L+D Sbjct: 215 ---DVDVRLGDVDVRLMDTAGMRRKSRVDDPLEYYS--VVRTLKAIDRSDVSLVLMDATE 269 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + + D+ + ++++ I + K D L P + + + + ++ +I S Sbjct: 270 LLTEQDKRLMLHVEERGKGLIIGVNKWDLLPPREDLGDVIRDQIRDQMPTLSYAPLIFLS 329 Query: 193 SVKRKGIEVL 202 + +G+ L Sbjct: 330 AKTGRGVHRL 339 >gi|222086678|ref|YP_002545212.1| GTP-binding protein [Agrobacterium radiobacter K84] gi|254783132|sp|B9J7W1|DER_AGRRK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|221724126|gb|ACM27282.1| GTP-binding protein [Agrobacterium radiobacter K84] Length = 475 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ K +VD Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGEAKLIDLRFRIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A G + + ++D + G+ +D+ + L K+ Sbjct: 58 AGLEEADEETLE----GRMRAQTELAIDEADLTLFVVDAKMGLTHVDKTLAEMLRKRGRP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E Y + P S+ +G+ LR AI+E I Sbjct: 114 VVLVANKS---------EARGSDSGFYDAYTLGLGDPCPISAEHGQGMMDLRDAIVEAIG 164 Query: 212 Y 212 + Sbjct: 165 H 165 Score = 91.8 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 13/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR N GKS+LIN + L T G T+ + Sbjct: 202 ETRPLRVAIVGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSI------SVDWTWRGRT 254 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + + D G + ++ + L V ++ D ++ D + + Sbjct: 255 VKMFDTAGMRRKARVTEKLEKLS--VADTLRAIRFAETVVIIFDATIPFEKQDLQIVDLV 312 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 ++ + I K D + Q L + +P + G++ L Sbjct: 313 IREGRAAVIAFNKWDMI--EDRQAVLADLREKTDRLLPQARGIRAVPIAGQTGDGLDRLM 370 Query: 204 KAILET 209 +AI++T Sbjct: 371 QAIVDT 376 >gi|182414655|ref|YP_001819721.1| small GTP-binding protein [Opitutus terrae PB90-1] gi|177841869|gb|ACB76121.1| small GTP-binding protein [Opitutus terrae PB90-1] Length = 501 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 77/205 (37%), Gaps = 18/205 (8%) Query: 15 LRGVPEIGLLPKAGPPE-IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 L PEI P + F GR NVGKSSL N L+ L S PG T+ +P Sbjct: 164 LGTAPEIEEARDPQKPLGVCFIGRPNVGKSSLSNRLLQSDRL-IVSEVPGTTRDAIE-LP 221 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +F L+D G A V+ + L R L V+L++D G Sbjct: 222 FEFIGRDGKSYPFRLIDTAGIKAATKLASPVEYFSRL--RSLDAIKETDVVFLVLDALEG 279 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQE-----------TLEKTKYLI--RN 180 V Q D+ + K+ +V+ K D + + EK + + R Sbjct: 280 VTQQDKAIAGEAVKEHKPIVLVVNKWDLVKRAFKERGAFEPYKSERDYREKYEKALFDRL 339 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKA 205 Y T VI S+V ++ + A Sbjct: 340 YFTPGSPVIFVSAVSGYEVDRMLNA 364 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 69/183 (37%), Gaps = 25/183 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD--FSNLKNNLPAMALV 89 +A GR NVGKS L N L RK ++ + PG T+ + D ++ L Sbjct: 5 VAIVGRPNVGKSRLFNRLA-RKRISIVHDQPGVTRDVVSTDIADGGYTLLDTGGIGYRGS 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D P A ++ V+ +T + ++D G+ +D + L K Sbjct: 64 DTPAA-LTAASEEQVEF----------AIATAALILFVVDGLDGISGLDAKIAERLRKSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-YPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++V+ K D + K + Y E + S+ +G LR AI+E Sbjct: 113 KPVRLVVNKAD----------FDDEKIDLAEVYRLGLGEPLRVSAEHGRGESELRAAIIE 162 Query: 209 TIN 211 + Sbjct: 163 ALG 165 >gi|163841322|ref|YP_001625727.1| GTP-binding protein EngA [Renibacterium salmoninarum ATCC 33209] gi|162954798|gb|ABY24313.1| GTP-binding protein [Renibacterium salmoninarum ATCC 33209] Length = 504 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L+N ++ R+ A + PG T+ + N + N +V Sbjct: 67 PVLAIVGRPNVGKSTLVNRILGRRE-AVVEDTPGVTRDRVMY------NAEWNGREFTVV 119 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + + V ++D G +D+ + L + Sbjct: 120 DTGGWEFDAKGIHQRVAEQAEM-----AIELADAVLFVVDATVGATAMDESMMKMLRRSK 174 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K D P T + + E S+ +G+ L I+E Sbjct: 175 KPIILVGNKAD--DPRTDSDV-------AALWGLGLGEPWSVSAQHGRGVADLLDKIMEI 225 Query: 210 I 210 + Sbjct: 226 L 226 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 11/185 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GP IA GR NVGKSSL+N L + + G T+ +F L + Sbjct: 238 RGGPRRIALIGRPNVGKSSLLNKLAGSERVV-VDPMAGTTRDP----VDEFIELGD--RT 290 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G + + D + L + E++ + V L +D + + D + Sbjct: 291 WRFVDTAGIRRRQHMAQGTDFYASLRTQSALEKAEVAVVLLAVD--EVLSEQDVRILQLA 348 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D L + LE+ + P V S+ + L A Sbjct: 349 IESGRALVLAFNKWDLLDD-ERRRYLEREIEQDLAHVEWAPRV-NISAKTGWHKDRLVPA 406 Query: 206 ILETI 210 + + Sbjct: 407 LDTAL 411 >gi|88799909|ref|ZP_01115481.1| predicted GTPase [Reinekea sp. MED297] gi|88777340|gb|EAR08543.1| predicted GTPase [Reinekea sp. MED297] Length = 458 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +A GR NVGKS+L+N ++ + + PG T + + + A Sbjct: 173 EDDSIRLAIIGRPNVGKSTLVNRMLGEDRVV-VYDHPGTTMDSIYI------PYERHGKA 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + V+ + IV+ L V L+ID + G+ D + F Sbjct: 226 YTLIDTAGVRRRKNITEAVEKFS--IVKTLQAIQDANVVVLVIDAQDGLVDQDMHMLGFA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + I + K D LS KT R ++ S++ + L ++ Sbjct: 284 LESGRALVIAINKWDGLSEEKKDSI--KTAIDRRMPFLDWADMHFISALHGTNVGHLYES 341 Query: 206 ILETIN 211 + E + Sbjct: 342 VEEAYD 347 Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N ++ A ++ G T+ + + K ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRFTRTRD-ALVADWSGLTRDRKY------GDGKLGERPFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + + V L+D + G+ D + L K Sbjct: 56 DTGGVSGFEEGLDEA-----MARQSFAAIDEADAVLFLVDGQSGITSADSFLAEHLRKTQ 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 S +V+ K D P A + Y E + ++ + +G+ L + +LE Sbjct: 111 KSVTLVVNKTDGRDPDVA---------VADFYELGLGEPVAIAASQNRGVRSLLEDVLE 160 >gi|89894997|ref|YP_518484.1| hypothetical protein DSY2251 [Desulfitobacterium hafniense Y51] gi|122482578|sp|Q24VA2|DER_DESHY RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|89334445|dbj|BAE84040.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 441 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 71/183 (38%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IA GR NVGKSSL+N L+ + + SN PG T+ S ++ Sbjct: 173 DPDTIRIAVVGRPNVGKSSLVNTLLGEERV-IVSNIPGTTRDAI------DSAFEHEGKH 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + + R L + +L+D GV + D+ + + Sbjct: 226 YIIIDTAGMRRKGRIEELTEQYS--VSRSLRAVDRSDVILMLLDAGEGVTEQDKKIAGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + +V+ K D + +T+ + + IR + + S+ + + L Sbjct: 284 HEAGKGIVLVVNKWDLIEKDD--KTMNRFEKDIREELGFMQYAPTLFISAKTGQRVTKLL 341 Query: 204 KAI 206 + Sbjct: 342 DLV 344 Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 56/178 (31%), Gaps = 20/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L +A N PG T+ + + + ++ Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGG-LVAIVENRPGVTRDRLY------RDSEWLGRKFTII 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + +ID + D + L + Sbjct: 57 DTGGIEFVNENTPITAQMRRQAE---IAIEEADVIVFVIDAQISPTPDDDMIAQTLRRSG 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + K+ E KT L Y E +P S+V I L ++ Sbjct: 114 KPVILAANKV---------ENFAKT-ELYEFYNLGLGEPVPISAVHGMNIGDLLDEVV 161 >gi|116670099|ref|YP_831032.1| GTP-binding protein EngA [Arthrobacter sp. FB24] gi|116610208|gb|ABK02932.1| small GTP-binding protein [Arthrobacter sp. FB24] Length = 516 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 21/186 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +A GR NVGKS+L+N ++ R+ A + PG T+ + N Sbjct: 74 PVKLDPVLAIIGRPNVGKSTLVNRILGRRE-AVVEDTPGVTRDRVMYSAT------WNGR 126 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +VD G+ + + + L+ V ++D G D+ V Sbjct: 127 NFTVVDTGGWEHDARGIHARVAEQAEMAVELA-----DAVLFVVDSAVGATATDEAVVKM 181 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K +V K+D + TL + E P S++ +G+ L Sbjct: 182 LRKSKKPVIMVANKVDDFAQEADSATL---------WGLGFGEPYPVSALHGRGVADLLD 232 Query: 205 AILETI 210 +++T+ Sbjct: 233 HVMDTL 238 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 70/194 (36%), Gaps = 12/194 (6%) Query: 18 VPEIGLLPKAGPPE-IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 I L ++G P IA GR NVGKSSL+N L + + N G T+ Sbjct: 241 YSTIEGLERSGGPRRIALIGRPNVGKSSLLNKLAGSERVV-VDNTAGTTRDPV------D 293 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 ++ VD G + + D + L + E++ + V L +D + + Sbjct: 294 EFIELGGRTWRFVDTAGIRRRQHMAQGADFYASLRTQSALEKAEVAVVLLAVD--EVLSE 351 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D + + + + K D L + LE+ + P V S++ Sbjct: 352 QDVRILQLAIESGRALVLAFNKWDLLDD-ERRTYLEREIEQDLAHVAWAPRV-NISALTG 409 Query: 197 KGIEVLRKAILETI 210 + L A+ + Sbjct: 410 WHKDRLVPALDTAL 423 >gi|154249358|ref|YP_001410183.1| GTP-binding protein Era [Fervidobacterium nodosum Rt17-B1] gi|154153294|gb|ABS60526.1| GTP-binding protein Era [Fervidobacterium nodosum Rt17-B1] Length = 301 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 77/177 (43%), Gaps = 16/177 (9%) Query: 34 FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 F G+ NVGKSS+IN ++ +K + S P T++ + + + VD PG Sbjct: 11 FVGKPNVGKSSIINAIM-KKKVVIVSEKPQTTRNRINVIYT------TDDFQIVFVDTPG 63 Query: 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 K ++ + + + +D + G + ++ + ++++ Sbjct: 64 IH-----KPLHRLGEYMVKAAVQALKNVDLLLFTVDAKEGFETPEEYIIEYVNQSKTPVI 118 Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 V+ KID + E ++ + ++R EV+ TS+V +G++ L + I+E + Sbjct: 119 GVINKIDLVDR----ERIDSIEEIMRKKVENLKEVVKTSAVTGEGLDKLLEVIVENL 171 >gi|329924033|ref|ZP_08279296.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF5] gi|328940872|gb|EGG37180.1| ribosome biogenesis GTPase Era [Paenibacillus sp. HGF5] Length = 290 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ P T++ V + + +D Sbjct: 1 MAIIGRPNVGKSTLMNQVIGQK-IAIMSDKPQTTRNKIHGVYTTSDS------QVVFLDT 53 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG K+ + LS + L+D G+ D+ + L K Sbjct: 54 PGIH-----KRQSKLGDYMNQTALSTLGEVEAALFLVDASEGIGGGDRYIAEQLQKIKTP 108 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KIDK+ P +E+ + L E++P S+ + L + I + + Sbjct: 109 IILVMNKIDKIEPPALLPLIEQYRKL-----HDFAEIVPISAKLGSNVNTLLEQIQKYL 162 >gi|302389542|ref|YP_003825363.1| ribosome-associated GTPase EngA [Thermosediminibacter oceani DSM 16646] gi|302200170|gb|ADL07740.1| ribosome-associated GTPase EngA [Thermosediminibacter oceani DSM 16646] Length = 436 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 G ++A G+ NVGKSSL+N ++ + + S+ PG T+ + + Sbjct: 172 DEGVIKVAVVGKPNVGKSSLVNAILGEERV-IVSDIPGTTRDAI------DTPFEYEGQK 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M L+D G K++++ + + R L V +++D + + D+ + Sbjct: 225 MVLIDTAGMRRKSRVKEDIEFYSNI--RALGAVERADIVLVVLDATQEISEQDKKIAGIA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + + IV+ K D + +T+ + IR + ++ S+ +K + + Sbjct: 283 HEAGKAVIIVVNKWDLVEKDD--KTIYRYTENIRKEFAFIQYAPIVFVSAKTKKRVNKVL 340 Query: 204 KAI 206 + I Sbjct: 341 ELI 343 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 22/181 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N ++ K ++ + PG T+ + + LVD Sbjct: 5 VAIVGRPNVGKSTLFNRIIG-KRISIVDDKPGVTRDRIYGQV------EWRGKKFTLVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + D I R + + + L+D + G+ D++V + L K Sbjct: 58 GGIDP-----EGSDVMTSHIRRQVEFAIDSSDLILFLLDSKEGLLPTDKEVAALLRKSGK 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 V+ K+D L Y E + S++ + L I+ I Sbjct: 113 PIIPVINKVD---------DYAAKPELYEFYQLGLGEPVFISAIHGSNVGDLLDQIVGFI 163 Query: 211 N 211 + Sbjct: 164 D 164 >gi|240146998|ref|ZP_04745599.1| ribosome-associated GTPase EngA [Roseburia intestinalis L1-82] gi|257200843|gb|EEU99127.1| ribosome-associated GTPase EngA [Roseburia intestinalis L1-82] gi|291535193|emb|CBL08305.1| ribosome-associated GTPase EngA [Roseburia intestinalis M50/1] gi|291539724|emb|CBL12835.1| ribosome-associated GTPase EngA [Roseburia intestinalis XB6B4] Length = 441 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P++A G+ NVGKSSLIN L +++ S+ G T+ ++++ N Sbjct: 174 EDERPKVAIIGKPNVGKSSLINKLA-QEDRVIVSDIAGTTRDAI------DTDIRYNGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ ++ID GV + D + Sbjct: 227 YVFIDTAGLRRKNKIKEEIERYS--IIRAVTAVERADVCIIVIDATEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ I + K D + EK + ++ P + E++ S+ + + L Sbjct: 285 HERGKGIIIAVNKWDAIEKDDKTIYRHTEKIRQILSFMP--YAEILFISAKSGQRLNKLF 342 Query: 204 KAI 206 I Sbjct: 343 DMI 345 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 19/179 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L + ++ + PG T+ + ++ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGER-ISIVKDTPGVTRDRIYADVTWLDYH------FTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + +T + L D R G++ D V L + Sbjct: 57 DTGGI----EPDSKDIILSQMREQAEIAIATADVIIFLTDVRQGLQDSDSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + Y + P S+ G+ + +++ Sbjct: 113 KPVVLVVNKVDSFEK--------FMPDVYEFYNLGIGDPYPISASSMLGLGDMLDEVVK 163 >gi|225018722|ref|ZP_03707914.1| hypothetical protein CLOSTMETH_02672 [Clostridium methylpentosum DSM 5476] gi|224948450|gb|EEG29659.1| hypothetical protein CLOSTMETH_02672 [Clostridium methylpentosum DSM 5476] Length = 440 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 19/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L N L+ R+ ++ + PG T+ + S + Sbjct: 2 SMPVVAVVGRPNVGKSTLFNKLIGRR-MSIVDDTPGVTRDRIY------SECEWCSRPFL 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD G P+ N + + + + + L+ D R GV DQDV + L K Sbjct: 55 LVDTGGI----EPESNDIILSQMRRQAELAIQSAQVIILVTDLRDGVTATDQDVAAMLIK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K D + + Y E I S+ G L A+ Sbjct: 111 SGKPVVLCVNKCDSVGAPPI--------GIYEFYNLGLGEPIAVSAAHGHGTGDLLDAVF 162 Query: 208 ETI 210 E + Sbjct: 163 EHM 165 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 9/178 (5%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A G+ NVGKSSLIN + + + S+ G T+ V L+D Sbjct: 179 KVAIVGKPNVGKSSLINKIAGEERV-IVSDIAGTTRDAVDTVVT------RGEDQFVLID 231 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + L +R+ ++ID G + D + + ++ Sbjct: 232 TAGIRRKSKVLDTIERYSVLRAHMAVDRAD--VCVIIIDATVGFTEQDSKIAGYAHEQGK 289 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 I + K D + T K ++ + S+ + ++ L I + Sbjct: 290 GCIIAINKWDAVEKDTHTMNEFTKKLQTDFSFMSYAPFVFISAKTGQRLDNLFTLIKK 347 >gi|219669400|ref|YP_002459835.1| GTP-binding protein EngA [Desulfitobacterium hafniense DCB-2] gi|254783150|sp|B8G2P9|DER_DESHD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219539660|gb|ACL21399.1| small GTP-binding protein [Desulfitobacterium hafniense DCB-2] Length = 441 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 71/183 (38%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IA GR NVGKSSL+N L+ + + SN PG T+ S ++ Sbjct: 173 DPDTIRIAVVGRPNVGKSSLVNTLLGEERV-IVSNIPGTTRDAI------DSAFEHEGKH 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + + R L + +L+D GV + D+ + + Sbjct: 226 YIIIDTAGMRRKGRIEELTEQYS--VSRSLRAVDRSDVILMLLDAGEGVTEQDKKIAGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + +V+ K D + +T+ + + IR + + S+ + + L Sbjct: 284 HEAGKGIVLVVNKWDLIEKDD--KTMNRFEKDIREELGFMQYAPTLFISAKTGQRVTKLL 341 Query: 204 KAI 206 + Sbjct: 342 DLV 344 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 56/178 (31%), Gaps = 20/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L +A N PG T+ + + + ++ Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGG-LVAIVENRPGVTRDRLY------RDSEWLGRKFTII 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + +ID + D + L + Sbjct: 57 DTGGIEFVNENTSISAQMRRQAE---IAIEEADVIVFVIDAQISPTPDDDMIAQTLRRSG 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + K+ E KT L Y E +P S+V I L ++ Sbjct: 114 KPVILAANKV---------ENFAKT-ELYEFYNLGLGEPVPISAVHGMNIGDLLDEVV 161 >gi|326391582|ref|ZP_08213112.1| ribosome-associated GTPase EngA [Thermoanaerobacter ethanolicus JW 200] gi|325992364|gb|EGD50826.1| ribosome-associated GTPase EngA [Thermoanaerobacter ethanolicus JW 200] Length = 439 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 19/196 (9%) Query: 21 IGLLPKAGP------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + LP+ +IA G+ NVGKSSL+N ++ + + SN PG T+ Sbjct: 162 VKKLPQEELEYTEETIKIAVIGKPNVGKSSLVNKILGEERV-IVSNIPGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + L+D G ++++ + L ERS + L+ID G Sbjct: 216 -DTPFSKDGKNYVLIDTAGIRRKSRISESIERYSVLRALAAIERSDI--CLLMIDATEGP 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + IV+ K D + T E + + + + ++ S Sbjct: 273 TEQDTKIAGYAFENGKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLS--FISFAPILFIS 330 Query: 193 SVKRKGIEVLRKAILE 208 + + + + + + + Sbjct: 331 AKTGQRVHRVLETVDK 346 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 25/182 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L N ++ K ++ + PG T+ + N + LVD Sbjct: 6 VSIVGRPNVGKSTLFNKIMG-KRISIVEDKPGVTRDRIY------GNAEWLDKKFILVDT 58 Query: 92 PGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G K I + L+D + G+ D+++ + L + Sbjct: 59 GGLDPNAEDILFSKVRLQVEAAIDAS-------DVILFLVDAKEGLMPEDEEIANILRRA 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D E + IP S+ GI L +++ Sbjct: 112 KKEVILVCNKVDSFK--------EMPPTYYDFFSLGLGNPIPISASNGLGIGELLDEVVK 163 Query: 209 TI 210 + Sbjct: 164 KL 165 >gi|91069954|gb|ABE10882.1| GTP-binding protein [uncultured Prochlorococcus marinus clone ASNC2259] Length = 457 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 13/180 (7%) Query: 34 FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPG 93 GR NVGKSSL+N + K A S+ G T + K N ++D G Sbjct: 181 IIGRPNVGKSSLLNSICGEKR-AIVSDISGTTTDSIDTLIKKGDNH------WKIIDTAG 233 Query: 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQ 153 + K + +G I R L+ID GV DQ + ++++ + Sbjct: 234 IRRKKNVKYGAEFFG--INRAFKSIDRSDVCVLVIDAVDGVTDQDQKLAGRIEEQGRACI 291 Query: 154 IVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 IV+ K D + T+ + + +R+ Y ++I S++ + ++ + + L +N Sbjct: 292 IVVNKWDLVEKN--SSTIYQVEKELRSKLYFLHWSKMIFISALTGQRVDNIFEHALNAVN 349 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L+N L + N A + PG T+ + + N + Sbjct: 3 LPTIAIIGRPNVGKSTLVNRLC-QSNDAIVFDKPGVTRD------RTYQNASWGGKEFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + L++D GV D + +L Sbjct: 56 VDTGGLVFDDDSEFLPEIRTQV----FLALEESSLALLVVDGNQGVTDGDLSIAKWLRNS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K + T + E IP S++ G L ++ Sbjct: 112 SCKTIVAVNKC--------ESTTLGISLASEFWKLGLGEPIPVSAIHGSGTGDLLDLVI 162 >gi|152975027|ref|YP_001374544.1| GTP-binding protein EngA [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189037136|sp|A7GN41|DER_BACCN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|152023779|gb|ABS21549.1| small GTP-binding protein [Bacillus cytotoxicus NVH 391-98] Length = 436 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 72/185 (38%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DDETIRFCLIGRPNVGKSSLVNALLGQERV-IVSNVAGTTRDAV------DTPYTKDGQD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ +K + L Sbjct: 283 HDSGRAVVIVVNKWDAVKKDE--KTMKAFEDNIRAHFQFLDYAPIVFLSAKTKKRTQTLL 340 Query: 204 KAILE 208 I + Sbjct: 341 PVINQ 345 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 21/180 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-ISIVEDIPGVTRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D E + Y E P S G+ L + + Sbjct: 112 KPVVLAVNKVD---------NPEMRNEIYDFYALGFGEPFPISGTHGLGLGDLLDEVAQH 162 >gi|303229883|ref|ZP_07316659.1| ribosome-associated GTPase EngA [Veillonella atypica ACS-134-V-Col7a] gi|302515439|gb|EFL57405.1| ribosome-associated GTPase EngA [Veillonella atypica ACS-134-V-Col7a] Length = 444 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 11/178 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +A GR NVGKSSL N L+ + + S+ G T+ ++ + Sbjct: 175 EEDTIHVAIIGRPNVGKSSLTNALLGQDRV-IVSDVAGTTRDSI------DTHWTHGDQK 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + IVR L V L++D GV + D+ + + Sbjct: 228 FVLIDTAGMRRKSKIDEAVERYS--IVRSLRSVDRSDIVVLVLDGVDGVTEQDKKIAGYA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVL 202 + IV+ K D + + TL T+ + ++ S++ ++ I L Sbjct: 286 YEAGKGVIIVVNKWDLVEKDD-KTTLRYTEDIYDELGFLQFAPILFASALTKQRIHRL 342 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 18/175 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN K ++ + PG T+ +F + + ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVN-KRISIVEDIPGVTRDRIYF------DAEWLNREFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L + ++D + G+ D++V + L Sbjct: 57 DTGGIEFVTENSHVIPKMMRLQAE--LAIEEADVILFVVDGKQGIVPADEEVANILRTSG 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID ++ + Y + I S+ + L Sbjct: 115 KPVVLVVNKIDSVNQEP---------NIYEFYNLGLGDPIGISAKNLMNLGDLLD 160 >gi|303232074|ref|ZP_07318777.1| ribosome-associated GTPase EngA [Veillonella atypica ACS-049-V-Sch6] gi|302513180|gb|EFL55219.1| ribosome-associated GTPase EngA [Veillonella atypica ACS-049-V-Sch6] Length = 444 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 11/178 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +A GR NVGKSSL N L+ + + S+ G T+ ++ + Sbjct: 175 EEDTIHVAIIGRPNVGKSSLTNALLGQDRV-IVSDVAGTTRDSI------DTHWTHGDQK 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + IVR L V L++D GV + D+ + + Sbjct: 228 FVLIDTAGMRRKSKIDEAVERYS--IVRSLRSVDRSDIVVLVLDGVDGVTEQDKKIAGYA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIEVL 202 + IV+ K D + + TL T+ + ++ S++ ++ I L Sbjct: 286 YEAGKGVIIVVNKWDLVEKDD-KTTLRYTEDIYDELGFLQFAPILFASALTKQRIHRL 342 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 18/175 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +VN K ++ + PG T+ +F + + ++ Sbjct: 4 PLVAVVGRPNVGKSTLFNAIVN-KRISIVEDIPGVTRDRIYF------DAEWLNREFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + + L + ++D + G+ D++V + L Sbjct: 57 DTGGIEFVTENSHVIPKMMRLQAE--LAIEEADVILFVVDGKQGIVPADEEVANILRTSG 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +V+ KID ++ + + Y + I S+ + L Sbjct: 115 KPVVLVVNKIDSVNQES---------NIYEFYNLGLGDPIGISAKNLMNLGDLLD 160 >gi|289581246|ref|YP_003479712.1| small GTP-binding protein [Natrialba magadii ATCC 43099] gi|289530799|gb|ADD05150.1| small GTP-binding protein [Natrialba magadii ATCC 43099] Length = 205 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 29/202 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 E+ GRSNVGKS+L+ L T +PG T+ N + D++ Sbjct: 6 PNREAEVILVGRSNVGKSTLMRELTGHS--FDTGGSPGVTRSPNHY---DWAP-----ED 55 Query: 86 MALVDMPGYGYAR-APKKNVDSWGGLIVRYLSERSTLRCV-YLLIDC--------RH-GV 134 + D+PG+G+ ++ + IV+Y+ E + V L++D RH G Sbjct: 56 FVITDLPGFGFMSGVHEERREEIKTNIVQYIEEYADNVLVAVLVVDGKSVIDIIDRHSGP 115 Query: 135 KQI--DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVI 189 +I D ++F FL + + + + K+DK+ E L + + P + Sbjct: 116 DEIPYDVEMFHFLRELEIPTVVAVNKMDKVD--DRDERLNELCDRLGILPPWKQWQETIA 173 Query: 190 PTSSVKRKGIEVLRKAILETIN 211 P ++ + I L +A+ E ++ Sbjct: 174 PITAKNGQ-ISSLNEAVREHLH 194 >gi|299473466|emb|CBN77863.1| PEngA, plastid EngA GTPase [Ectocarpus siliculosus] Length = 680 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 14/169 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N L + S+ PG T+ + + LVD Sbjct: 400 VAIVGRPNVGKSSLLNRLFGETR-SIVSDVPGTTRDSI------DAMFERGGRTYRLVDT 452 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + ++ R V L++D G+ D+ + + + Sbjct: 453 AGIRRKGKVDYGNEFF--MVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRIQSDGRA 510 Query: 152 YQIVLTKIDKL---SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 +V K D + ++ + +E + ++ P EV TS+ + Sbjct: 511 CVVVCNKWDLVEDKDDSSYNKAVEYARQMLS--PVKWAEVCFTSAKTGQ 557 Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 25/187 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNR-KNLARTSNAPGRTQHLNF----FVPKDFSNLKNNL 83 P +A GR NVGKS+++N L R K+ + + G T+ + + KDF + + Sbjct: 219 FPVVAVIGRPNVGKSTVVNRLAKRFKDGSIVFDESGVTRDRTYKRAWYCGKDFDVV--DT 276 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + D G +A+ ++ L V +++D G +DQ++ Sbjct: 277 GGLVFDDKGGDVFAKEIRQQA----------LIALEEATAVIMVVDGIVGCNVLDQEIAR 326 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 FL ++ V + + K + Q + E P S + GI + Sbjct: 327 FLRQQKVPVVLAVNKCESQKYGEIQTA--------EFWCLGLGEPWPISGLHGDGIYDMM 378 Query: 204 KAILETI 210 + E + Sbjct: 379 DNVAEHL 385 >gi|144898965|emb|CAM75829.1| Small GTP-binding protein domain:GTP-binding [Magnetospirillum gryphiswaldense MSR-1] Length = 470 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 67/175 (38%), Gaps = 20/175 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L R+ LA + PG T+ ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLAGRR-LAIVHDMPGVTRDRREAAASLLGM------EFRVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + A +++++ + + V +LID R GV +D +L K+ Sbjct: 58 AG--FEDAHDESIEARMRYQTD--TAVAEADVVLMLIDARAGVTPLDAHFADYLRKQKTP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V K E + +Y E +P S+ +G+ L A+ Sbjct: 114 VILVANKC---------EGKAGAPGMYESYGLGLGEPVPFSAEHGEGLAELFDAL 159 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 72/187 (38%), Gaps = 19/187 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P ++ GR NVGKS+L+N L+ + + T G T+ + ++ Sbjct: 196 PERPLQLVIVGRPNVGKSTLVNRLLGQDRM-LTGPEAGLTRDAI------SVDWQHRDRG 248 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + LVD G + V+ L V L++D + + D + + Sbjct: 249 IRLVDTAGLRKRANIEDPVEKLSA--SNTLEAIRMAEVVVLVMDSAAILDKQDLTIARMV 306 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEV-----IPTSSVKRKGIE 200 ++ S I + K D ++ E + L T+ P V + S++ +G++ Sbjct: 307 VEEGRSLVIAINKWD-----AVEKPQEALQRLADRLETSLPMVRGLPTVTISALTGRGVD 361 Query: 201 VLRKAIL 207 + A+L Sbjct: 362 KMMDAVL 368 >gi|326794518|ref|YP_004312338.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1] gi|326545282|gb|ADZ90502.1| GTP-binding protein engA [Marinomonas mediterranea MMB-1] Length = 445 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 11/186 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ I GR NVGKS+L+N ++ + + PG T+ + + + Sbjct: 176 ESKGIRIGVVGRPNVGKSTLVNRMLGEDRVV-VYDMPGTTRDSVYI------PYQRHDKE 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + K+ V+ + IV+ L V +ID + + D + ++ Sbjct: 229 YTLIDTAGVRRRKHVKEAVEKFS--IVKTLQAIQDANVVICVIDAHEDLVEQDLHMIGYV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 I + K D + + ++ + + P A +V S++ + L Sbjct: 287 LDAGRGLVIAINKWDGMQKDEREHIKKEVERRLGFVPYA--KVHYISALHGTAVGDLYDT 344 Query: 206 ILETIN 211 I ET + Sbjct: 345 IEETYD 350 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 65/174 (37%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + A ++ PG T+ + + K + Sbjct: 2 IPVIALVGRPNVGKSTLFNRLT-KSRDALVADYPGLTRDRKY------GDGKLGEHDFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V L+D RHG+ D+ + + L + Sbjct: 55 IDTGGI-----TGDEQGIDEKMASQSLQAIEEADAVLFLVDGRHGLNPADEMIANHLRRS 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +V+ K D ++ A L Y + P ++ KG+ L Sbjct: 110 SKPTYLVVNKTDGINEDIA---------LADFYSVGLGSLYPIAAAHGKGVRSL 154 >gi|317504953|ref|ZP_07962902.1| ribosome-associated GTPase EngA [Prevotella salivae DSM 15606] gi|315663945|gb|EFV03663.1| ribosome-associated GTPase EngA [Prevotella salivae DSM 15606] Length = 437 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 73/188 (38%), Gaps = 19/188 (10%) Query: 21 IGLLPKAGP-------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 I LP+ P P A GR N GKSS+IN + + G T+ + Sbjct: 160 IDKLPQENPESVEEEIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRY 218 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F LVD G ++++ + + R + L++D G Sbjct: 219 DKFG------FDFYLVDTAGIRRKNKVSEDLEFYSVM--RSIRAIENSDVCILMLDATRG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPT 191 V+ D ++F + K S +V+ K D + +Q+ + + IRN P +I Sbjct: 271 VEAQDMNIFQLIQKNKKSLVVVVNKWDLVED-KSQKAINTFEAAIRNRMAPFVDFPIIFA 329 Query: 192 SSVKRKGI 199 S++ ++ I Sbjct: 330 SALTKQRI 337 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 62/180 (34%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QSRRAIVSDTAGTTRDRQY------GKCSWNSKEFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G+ D + I R L V L+D GV D+DV L + + Sbjct: 58 GGWVVNSD-----DIFEDAIRRQVLVATEEADLVLFLVDVSTGVTDWDEDVAMILRRAKL 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y E S+ G L I++ + Sbjct: 113 PVILVANKVD---------NNSEYYEAAEFYKLGLGEPQCISAATGGGTGDLLDLIIDKL 163 >gi|225182107|ref|ZP_03735535.1| GTP-binding protein Era [Dethiobacter alkaliphilus AHT 1] gi|225167194|gb|EEG76017.1| GTP-binding protein Era [Dethiobacter alkaliphilus AHT 1] Length = 302 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 21/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N V K +A S+ P T++ + L + +D Sbjct: 13 IALIGRPNVGKSTLMNAFVGEK-MAIISDKPQTTRNQIRGI------LTADDYQAVFLDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG K ++ + + + L+D G D + L Sbjct: 66 PGIH-----KPQHKLGEKMVQVAVRTLQEVDLILFLVDAAAGPGAGDDYIIRQLSDVETP 120 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE--VIPTSSVKRKGIEVLRKAILET 209 +V K D + +E + ++ +Y +P +P S++ E L I+++ Sbjct: 121 VILVANKAD-------EAGMEAAQNVLEHYLPLYPFKAALPVSAITGINQEELLSLIVDS 173 Query: 210 I 210 + Sbjct: 174 L 174 >gi|326385799|ref|ZP_08207428.1| GTP-binding protein EngA [Novosphingobium nitrogenifigens DSM 19370] gi|326209778|gb|EGD60566.1| GTP-binding protein EngA [Novosphingobium nitrogenifigens DSM 19370] Length = 454 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 26/186 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + GR NVGKS+L N LV +K LA + PG T+ F + + A + Sbjct: 1 MPHVVIIGRPNVGKSTLFNRLVGKK-LALVDDQPGVTRDRRF------GDAELLGLAFTI 53 Query: 89 VDMPGYG---YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G+ + P + + +ID R G+ +D+++ L Sbjct: 54 VDTAGWEDDDPSSLPGRMRAQTEAALEG-------ATVALFVIDARAGLTPLDEEIGRHL 106 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V ++ K E L +Y + I S+ +G+ L +A Sbjct: 107 HESSVPVVLLANKA---------EGRAGDSGLFESYALGFGDPIAFSAEHGEGLADLFQA 157 Query: 206 ILETIN 211 +L I Sbjct: 158 LLPLIG 163 Score = 95.2 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 7/182 (3%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++A GR N GKS+LIN L+ L T G T+ + Sbjct: 180 PKSVLKLAVVGRPNAGKSTLINRLLGEDRL-LTGPEAGITRDSIAVDWEWRDPATGESRP 238 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G ++ + V LL+D G++ D + S + Sbjct: 239 IRLIDTAGMRKKAQVVDKLERLS--VADARRAIDFAEVVVLLLDATRGLEHQDLKIASMV 296 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLR 203 ++ + I + K D A + + + ++ S+ KG++ + Sbjct: 297 LEEGRALMIAINKWD--VAEDASGLFNGVRAALDDGLAQVRGLPLVAVSARTGKGLDQML 354 Query: 204 KA 205 A Sbjct: 355 GA 356 >gi|262118592|pdb|3GEH|A Chain A, Crystal Structure Of Mnme From Nostoc In Complex With Gdp, Folinic Acid And Zn Length = 462 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 23/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N ++ + A ++ PG T+ + S L + ++D Sbjct: 226 KVAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDVV------ESQLVVGGIPVQVLD 278 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G + R +T V L ID G DQ+++ + + Sbjct: 279 TAGI---RETSDQVEKIG--VERSRQAANTADLVLLTIDAATGWTTGDQEIYEQVKHR-- 331 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + YP +++ T++ +++GI+ L AILE + Sbjct: 332 PLILVMNKIDLVEKQLITSL---------EYPENITQIVHTAAAQKQGIDSLETAILEIV 382 >gi|17232169|ref|NP_488717.1| tRNA modification GTPase TrmE [Nostoc sp. PCC 7120] gi|21363007|sp|Q8YN91|MNME_ANASP RecName: Full=tRNA modification GTPase mnmE gi|17133814|dbj|BAB76376.1| thiophen / furan oxidation protein [Nostoc sp. PCC 7120] Length = 459 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 23/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N ++ + A ++ PG T+ + S L + ++D Sbjct: 223 KVAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDVV------ESQLVVGGIPVQVLD 275 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G + R +T V L ID G DQ+++ + + Sbjct: 276 TAGI---RETSDQVEKIG--VERSRQAANTADLVLLTIDAATGWTTGDQEIYEQVKHR-- 328 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + YP +++ T++ +++GI+ L AILE + Sbjct: 329 PLILVMNKIDLVEKQLITSL---------EYPENITQIVHTAAAQKQGIDSLETAILEIV 379 >gi|167753390|ref|ZP_02425517.1| hypothetical protein ALIPUT_01664 [Alistipes putredinis DSM 17216] gi|167658015|gb|EDS02145.1| hypothetical protein ALIPUT_01664 [Alistipes putredinis DSM 17216] Length = 433 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 20/195 (10%) Query: 21 IGLLPKAG------PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + LP P I GR NVGKSSL N L+ + + G T+ Sbjct: 159 VRDLPPETKNEEEELPRITIVGRPNVGKSSLTNALLGEERN-IVTPIAGTTRDAIHSRYN 217 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + LVD G ++++ + + R + L++D + G+ Sbjct: 218 KYGL------DFYLVDTAGMRKKGKVTEDLEFYSVM--RSIRAIEESDVCILMLDAQQGL 269 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTS 192 + D ++ + + + IV+ K D + T+++ K + P +I TS Sbjct: 270 ESQDLNIHNLIVRNRKGCVIVVNKWDLVEKG--NNTMKEWKEALAKKLAPFNDIPIIFTS 327 Query: 193 SVKRKGI-EVLRKAI 206 + ++ I EVL+ AI Sbjct: 328 VLNKQRILEVLQTAI 342 Score = 97.9 bits (243), Expect = 7e-19, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 60/176 (34%), Gaps = 20/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV ++ A G T+ + + N +++D Sbjct: 4 VAIVGRPNVGKSTLFNRLVGQRK-AIVDATAGTTRD------RHYGKTDWNGREFSVIDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 GY D ++ + L++ G+ +DQ + L + + Sbjct: 57 GGYSVNSDDIFEDDIRRQVM----LAIEEADVILFLVEVNTGITDLDQMMADILRRTSKK 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K+D + Y E SS+ G L I+ Sbjct: 113 VLLVCNKVD---------NYDLIYSSHEFYSLGLGEPYCISSMSGSGTGDLMDEIV 159 >gi|161524640|ref|YP_001579652.1| GTP-binding protein EngA [Burkholderia multivorans ATCC 17616] gi|189350604|ref|YP_001946232.1| GTP-binding protein EngA [Burkholderia multivorans ATCC 17616] gi|238687037|sp|A9AH00|DER_BURM1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|160342069|gb|ABX15155.1| small GTP-binding protein [Burkholderia multivorans ATCC 17616] gi|189334626|dbj|BAG43696.1| GTP-binding protein [Burkholderia multivorans ATCC 17616] Length = 445 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGIKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + ++ + +V+ L S V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRSGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D L + ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGLDEHARERAKADLTRKLKFLDFAKSHFI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGARPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVATDFYELGLGDPRAISAAHGDGV 152 >gi|134277744|ref|ZP_01764459.1| GTP-binding protein EngA [Burkholderia pseudomallei 305] gi|226197301|ref|ZP_03792878.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei Pakistan 9] gi|134251394|gb|EBA51473.1| GTP-binding protein EngA [Burkholderia pseudomallei 305] gi|225930680|gb|EEH26690.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei Pakistan 9] Length = 433 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 +IA GR NVGKS+L+N L+ + + PG T+ + + + N L Sbjct: 167 GIKIAIVGRPNVGKSTLVNTLIGEDRV-IAFDMPGTTRDSIY------VDFERNGKHYTL 219 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 220 IDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQ 277 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D L P + T ++ + S+ ++ GI L +++ + Sbjct: 278 GRALVVGVNKWDGLDPHVRERTKADLARKLK--FLEFAKFHFISAAEKTGIGALMRSVDD 335 Query: 209 T 209 Sbjct: 336 A 336 Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 20/168 (11%) Query: 41 GKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP 100 GKS+L N L ++ A ++ PG T+ + + + +VD G+ Sbjct: 2 GKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGARPYLVVDTGGFEPVAKD 54 Query: 101 KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 + + V ++D R+G+ D+ + +L K +V+ K Sbjct: 55 G----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKA- 109 Query: 161 KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 E ++ T Y + S+ G+ + LE Sbjct: 110 --------EGMKYTAVASDFYELGLGDPRAISAAHGDGVNDMINEALE 149 >gi|328955535|ref|YP_004372868.1| iron-only hydrogenase maturation protein HydF [Coriobacterium glomerans PW2] gi|328455859|gb|AEB07053.1| iron-only hydrogenase maturation protein HydF [Coriobacterium glomerans PW2] Length = 422 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 71/193 (36%), Gaps = 21/193 (10%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P+A I F GR N GKSSL+N + + +LA S+ PG T V K L Sbjct: 4 SLNDTPRANRVHIGFFGRRNAGKSSLVNAVTGQ-DLAVVSDTPGTTTDP---VYKSMELL 59 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL---RCVYLLIDCRHGVKQ 136 L + ++D PG+ + R L L+ D GV Sbjct: 60 --PLGPVVIIDTPGFDDTGELGELRVK---------KTRQVLNKCDIAILVYDAASGVTA 108 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDK---LSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 D+ + + + + + I+ K D+ + T E + S+ Sbjct: 109 ADRQLLELIRDRGLPHLIIANKSDRGAAAGDSATAGPDAATASSASAAAPTDNEALCVSA 168 Query: 194 VKRKGIEVLRKAI 206 + +GI L++ I Sbjct: 169 LSGQGIHELKERI 181 >gi|295085093|emb|CBK66616.1| iron-only hydrogenase maturation protein HydF [Bacteroides xylanisolvens XB1A] Length = 396 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 78/191 (40%), Gaps = 22/191 (11%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P A I GR N GKSSLIN L + ++A SN PG T L + Sbjct: 2 SLTDTPNANRLHITLFGRRNSGKSSLINALTGQ-DIALVSNTPGTTTDL----VSKAMEI 56 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + P + +D PG+ + I R L LL C ++ Sbjct: 57 QGIGPCL-FIDTPGFDDEGELGELR------ISRTLKAIEKTDIALLL--CEDTTFFHEK 107 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 ++ + L +K + VL KID +E + I HP + S+ ++ GI Sbjct: 108 EILALLKEKNIPVIPVLNKID------IRENSDHLATYIEEQCKIHP--LLISAKEKIGI 159 Query: 200 EVLRKAILETI 210 E++R+AILE + Sbjct: 160 ELIRQAILEKL 170 >gi|228907236|ref|ZP_04071096.1| GTP-binding protein engA [Bacillus thuringiensis IBL 200] gi|228852376|gb|EEM97170.1| GTP-binding protein engA [Bacillus thuringiensis IBL 200] Length = 436 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DDETIRFSLIGRPNVGKSSLVNALLGQERV-IVSNIAGTTRDAV------DTPYSKDDQD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + +I S+ +K + L Sbjct: 283 HDSGRAVIIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLDYAPIIFLSAKTKKRTQTLL 340 Query: 204 KAILE 208 I E Sbjct: 341 PVINE 345 Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGITRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S G+ L Sbjct: 112 KPIVLAVNKVD---------NPEMRSDIYDFYSLGFGEPFPISGTHGLGLGDLLDE 158 >gi|225570488|ref|ZP_03779513.1| hypothetical protein CLOHYLEM_06589 [Clostridium hylemonae DSM 15053] gi|225160685|gb|EEG73304.1| hypothetical protein CLOHYLEM_06589 [Clostridium hylemonae DSM 15053] Length = 442 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 13/180 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA G+ NVGKSS++N L+ + + S+ G T+ + + + Sbjct: 177 RPRIAIVGKPNVGKSSIVNKLLGEQRV-IVSDVAGTTRDAI------DTEIIHGGREYVF 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 230 IDTAGLRRKSKIKEELERYS--IIRTVTAVERADVVLVVIDAAEGVTEQDAKIAGIAHER 287 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 IV+ K D + +T+ + ++ +R + P E++ S+ + + L I Sbjct: 288 GKGIIIVVNKWDAIEKND--KTMREYEHRVRQVLSFMPYAEIMYVSAETGQRLNKLYDMI 345 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 62/179 (34%), Gaps = 19/179 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGE-MISIVKDTPGVTRDRIYAEVSWLDK------EFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ + + T + + D R G+ D V L + Sbjct: 57 DTGGI----EPESKDVILSQMREQAQIAIDTADVIVFITDVRQGLVDSDSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + Y + +P S+ R GI + + + + Sbjct: 113 KPVVLVVNKVDSFDK--------FMPDVYEFYNLGIGDPVPVSAASRLGIGDMLERVAQ 163 >gi|222149419|ref|YP_002550376.1| GTP-binding protein EngA [Agrobacterium vitis S4] gi|254783133|sp|B9JZQ5|DER_AGRVS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|221736402|gb|ACM37365.1| GTP-binding protein [Agrobacterium vitis S4] Length = 474 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ K +VD Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGEAKLVDLRFHIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A A G + + ++D + G+ +D+ + L K+ Sbjct: 58 AGLEEAGADTLE----GRMRAQTEIAIDEADLSLFVVDAKMGLTHVDKALADMLRKRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + E +P S+ +G+ LR AI+E I Sbjct: 114 VVLVANKS---------EARGSDGGFYDAFTLGLGEPVPISAEHGQGMIDLRDAIVEAIG 164 Score = 88.3 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 13/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A GR N GKS+LIN + L T G T+ V D+ Sbjct: 200 DTKPLRVAIVGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSIS-VEWDWRG-----RT 252 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + + D G + ++ + L V ++ D ++ D + + Sbjct: 253 IKMFDTAGMRRKARVIEKLEKLS--VADTLRAIRFAETVVIVFDATIPFEKQDIQIVDLV 310 Query: 146 DKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 ++ + + K D + E EKT+ L+ +P + G+E L Sbjct: 311 LREGRAAVLAFNKWDLVEDPQAVLAELREKTERLLPQ--ARGIRAVPMAGQTGYGLEKLM 368 Query: 204 KAILET 209 ++I++T Sbjct: 369 QSIIDT 374 >gi|311742420|ref|ZP_07716229.1| ribosome-associated GTPase EngA [Aeromicrobium marinum DSM 15272] gi|311314048|gb|EFQ83956.1| ribosome-associated GTPase EngA [Aeromicrobium marinum DSM 15272] Length = 450 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 65/190 (34%), Gaps = 21/190 (11%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 E +P P +A GR NVGKS+L+N ++ R+ A + PG T+ + Sbjct: 3 ASEHDDIPNGPLPVLAVIGRPNVGKSTLVNRIIGRRE-AVVEDVPGVTRDRVAYEAT--- 58 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 N +VD G+ + I V ++D G+ Sbjct: 59 ---WNGRTFTVVDTGGWDPDARGLAERIAAQAEI-----AVQVADAVLFVVDATIGITDS 110 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D+ V L + K+D + E + N P P S++ + Sbjct: 111 DEAVVKILRAAGKPVVLAANKVD-------DQRTEAEAASLWNLGLGEP--FPVSALHGR 161 Query: 198 GIEVLRKAIL 207 G + AIL Sbjct: 162 GSGDMLDAIL 171 Score = 92.1 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 68/194 (35%), Gaps = 11/194 (5%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P GP +A G+ NVGKSSL+N L + + +A G T + Sbjct: 177 APPEDFDAPEGPRRVAIVGKPNVGKSSLLNRLAGEERVV-VDDASGTTVDP----VDELV 231 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 L L +D G + + L ER+ ++ID + + Sbjct: 232 ELGGGL--WTFIDTAGIRRRVRDASGHEYYASLRTSAAIERAE--VAVMIIDASQPLTEQ 287 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + S + + + I K D++ + + + A I +++ Sbjct: 288 DTRIISTVAETGRALVIAFNKWDQVDEERRYYLDREIERELVQVQWA--PRINIAALTGW 345 Query: 198 GIEVLRKAILETIN 211 ++ L +A+ ++ Sbjct: 346 HVDRLVRALDSALD 359 >gi|108759687|ref|YP_631948.1| GTP-binding protein EngA [Myxococcus xanthus DK 1622] gi|122981004|sp|Q1D5X5|DER_MYXXD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|108463567|gb|ABF88752.1| GTP-binding protein EngA [Myxococcus xanthus DK 1622] Length = 459 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 70/181 (38%), Gaps = 18/181 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N LV R+ +A + PG T+ + +++ + + Sbjct: 3 PLVAIVGRPNVGKSTLFNRLVGRR-IALVQDEPGVTRD------RHYADAEWEGRQFTFI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ P + + + + D R G+ D+ V ++L K Sbjct: 56 DTGGF----VPGDEDQLLQQVREQAQLAVDECDVIVFVTDARAGLTAADEAVANYLRKSG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + K+D + + + L Y +V S+ G++ L +++ Sbjct: 112 KPVVLAANKLD--NTSGQMQALAG-----EFYRLGLGDVQALSAEHGLGMQELFDSVVAR 164 Query: 210 I 210 + Sbjct: 165 L 165 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 73/189 (38%), Gaps = 13/189 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P G +A GR NVGKS+L+N ++ K + S+ G T+ S L Sbjct: 178 PDDGIIRLAIIGRPNVGKSTLVNAILKEKRVV-ASDVAGTTRDPV------DSELTYKDR 230 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + L D G ++ + V+ + +V L LL+D D + Sbjct: 231 KLLLTDTAGIRRKKSIAQRVEQFS--VVAALKVMERSDVAVLLMDATEPAVDQDAKLAGL 288 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVL 202 +++ + IV+ K D + Q E + +++ + ++ TS++ +E + Sbjct: 289 AEERGRALVIVVNKWDLV--GADQRRQETYRESLKHSLKFVGYAPILFTSALTGSKVEKV 346 Query: 203 RKAILETIN 211 E + Sbjct: 347 VDVATELAD 355 >gi|325962917|ref|YP_004240823.1| GTP-binding protein Era [Arthrobacter phenanthrenivorans Sphe3] gi|323469004|gb|ADX72689.1| GTP-binding protein Era [Arthrobacter phenanthrenivorans Sphe3] Length = 516 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 69/186 (37%), Gaps = 21/186 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +A GR NVGKS+L+N ++ R+ A + PG T+ + N Sbjct: 74 PVKLDPVLAIIGRPNVGKSTLVNRILGRRE-AVVEDTPGVTRDRVMYSAN------WNGR 126 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G+ + + + L+ V ++D G D+ V Sbjct: 127 NFTLVDTGGWEHDARGIHARVAEQAEMAVELA-----DAVLFVVDSAVGATATDEGVMKM 181 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K+D + TL + E P S++ +G+ L Sbjct: 182 LRRSKKPVIMVANKVDDFAQEADSATL---------WGLGFGEPYPVSALHGRGVADLLD 232 Query: 205 AILETI 210 +++ + Sbjct: 233 HVMDVL 238 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 62/176 (35%), Gaps = 11/176 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 GP IA GR NVGKSSL+N L + + N G T+ ++ Sbjct: 251 GGPRRIALIGRPNVGKSSLLNKLAGTERVV-VDNTAGTTRDPV------DEFIELGGRTW 303 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G + + D + L + E++ + V L +D + + D + Sbjct: 304 RFVDTAGIRRRQHMAQGADFYASLRTQAALEKAEVAVVLLAVD--EVLSEQDVRILQLAI 361 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + K D L + LE+ + P V S+ + L Sbjct: 362 ESGRALVLAFNKWDLLDD-ERRRYLEREIEQDLAHVNWAPRV-NISAKTGWHKDRL 415 >gi|283769536|ref|ZP_06342432.1| ribosome-associated GTPase EngA [Bulleidia extructa W1219] gi|283103804|gb|EFC05190.1| ribosome-associated GTPase EngA [Bulleidia extructa W1219] Length = 437 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 12/193 (6%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P+ +P+ ++A G NVGKSSL+N ++N + A SN G T+ + Sbjct: 164 PKRMDIPETKGVKMAVIGEPNVGKSSLVNAILNEER-AIVSNIQGTTRDAI------DTP 216 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 + +VD G ++++ + L R + V ++D G+++ D Sbjct: 217 FTHEGKPYIIVDTAGIRKRGKIYESIEKYSVL--RAMRAIERCDVVLFVMDGEAGIREQD 274 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + V + + IV+ K D + K ++ ++ S+ + Sbjct: 275 KHVAGYAVEMNKPIIIVVNKWDIVEKDDRTMNEFTQKVRDHFLYLSYAPIVFVSAKTHQR 334 Query: 199 IEVLR---KAILE 208 + + ILE Sbjct: 335 VNRILPIVDMILE 347 Score = 85.6 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 21/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS++ N LV + ++ + PG T+ + + N + ++D Sbjct: 6 VAIVGRPNVGKSTIFNRLVGER-MSIVEDIPGVTRDRLYGSAEWAGN------SFRVIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A P + I + ++ D + GV + D+ + L K Sbjct: 59 GGIQLANQPFQTEIRAQVDI-----AMEEADVILMVCDGQMGVMEDDRFIAGLLQKNKKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + +ID + + Y + + S + G+ + E + Sbjct: 114 VVLAVNRID---------DQSRMVNIYEFYELGLGDPMACSGIHGVGVGDVLDRCFELM 163 >gi|53804478|ref|YP_113919.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath] gi|53758239|gb|AAU92530.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath] Length = 293 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ S P T+H + D + VD Sbjct: 6 VALVGRPNVGKSTLLNHLLGQK-LSIVSRRPQTTRHRILGIKTD------GRGQVIYVDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG N I L + + L+D R G D+ V + + + + Sbjct: 59 PGIHGGARRAMNRYLNRTAISSLLG----VDVILWLVD-RAGWLPDDELVMARIKEAKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D++ ++TL N E++P S++K + VL + +L + Sbjct: 114 VILVINKVDRI---EGKDTLLPFLAE-ANATGLFSEIVPISALKGINLAVLEERVLALL 168 >gi|298480725|ref|ZP_06998921.1| GTP-binding protein [Bacteroides sp. D22] gi|298273159|gb|EFI14724.1| GTP-binding protein [Bacteroides sp. D22] Length = 396 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 22/190 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + P A I GR N GKSSLIN L + ++A SN PG T L ++ Sbjct: 3 LTDTPNANRLHITLFGRRNSGKSSLINALTGQ-DIALVSNTPGTTTDL----VSKAMEIQ 57 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 P + +D PG+ + I R L LL C +++ Sbjct: 58 GIGPCL-FIDTPGFDDEGELGELR------ISRTLKAIEKTDIALLL--CEDTTFFHEKE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L +K + VL KID +E + I HP + S+ ++ GIE Sbjct: 109 ILALLKEKNIPVIPVLNKID------IRENSDHLATYIEEQCKIHP--LLISAKEKIGIE 160 Query: 201 VLRKAILETI 210 ++R+AILE + Sbjct: 161 LIRQAILEKL 170 >gi|261418494|ref|YP_003252176.1| GTP-binding protein Era [Geobacillus sp. Y412MC61] gi|297529346|ref|YP_003670621.1| GTP-binding protein Era [Geobacillus sp. C56-T3] gi|319767545|ref|YP_004133046.1| GTP-binding protein Era [Geobacillus sp. Y412MC52] gi|261374951|gb|ACX77694.1| GTP-binding protein Era [Geobacillus sp. Y412MC61] gi|297252598|gb|ADI26044.1| GTP-binding protein Era [Geobacillus sp. C56-T3] gi|317112411|gb|ADU94903.1| GTP-binding protein Era [Geobacillus sp. Y412MC52] Length = 302 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ +N ++ +K +A S+ P T++ V D + + +D Sbjct: 11 VAIIGRPNVGKSTFLNRVIGQK-IAIMSDKPQTTRNKIQGVYTD------DDAQIIFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ L+ + + +++ G + + + L + Sbjct: 64 PGV---HKPKHKLGDF--MMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLKEVDTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID++ P +++ K L YP E++P S+++ ++ L + I E + Sbjct: 119 VFLVINKIDRVHPDELLPLIDRYKDL---YP--FAEIVPISALEGNNVDRLLEQIKERL 172 >gi|254514003|ref|ZP_05126064.1| GTP-binding protein EngA [gamma proteobacterium NOR5-3] gi|219676246|gb|EED32611.1| GTP-binding protein EngA [gamma proteobacterium NOR5-3] Length = 474 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 72/181 (39%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G +A GR NVGKS+L+N ++ + + PG T+ + N Sbjct: 174 EQGGTRVAVVGRPNVGKSTLVNRILGEDRVV-VYDQPGTTRDSVYI------NFSREGRP 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ V+ + I++ LS S V LL+D + G+ D + Sbjct: 227 YTLIDTAGVRRRKNVREAVEKFS--IIKTLSAISDANVVVLLVDGQEGLVDQDLHLLGNC 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + + K D L P + +R ++ S++ G+ L + Sbjct: 285 LEAGRALVLAVNKWDGLDPDQKDAIRSELDRRLR--FVDFADMHFISALHGSGVGTLFGS 342 Query: 206 I 206 I Sbjct: 343 I 343 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 21/182 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A +N G T+ + ++ A + Sbjct: 2 LPSIALVGRPNVGKSTLFNQLTRSRD-ALVANLSGLTRDRKY------GEGRSEDRAFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + L V LL+D + G+ +D + +L +K Sbjct: 55 IDTGG-----VSGDEEGIDAAMAEQSLLAIDEADVVLLLVDAKDGLNPVDVQLVQYLRQK 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + +V+ KID P A + + + ++ +G+ + + +LE Sbjct: 110 SRDFHLVVNKIDGRDPDVA---------ISDFHSLGIASMHAIAASHGRGVRQMIETVLE 160 Query: 209 TI 210 ++ Sbjct: 161 SV 162 >gi|254511655|ref|ZP_05123722.1| GTP-binding protein EngA [Rhodobacteraceae bacterium KLH11] gi|221535366|gb|EEE38354.1| GTP-binding protein EngA [Rhodobacteraceae bacterium KLH11] Length = 487 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 6/183 (3%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 A P ++A GR N GKS+LIN ++ L T G T+ D+++ + Sbjct: 194 DAKPLQVAVVGRPNAGKSTLINKIMGEDRL-LTGPEAGITRDAISLRV-DWADPEGGSTP 251 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M + D G ++ ++ + L V +L+D +Q D + Sbjct: 252 MRIFDTAGMRKKAKVQEKLEKLS--VSDGLRAVKFAEVVVVLLDAAIPFEQQDLRIADLA 309 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP-EVIPTSSVKRKGIEVLRK 204 +++ + + + K D + + ++ + + R P +I S+ +G+E LR Sbjct: 310 EREGRAVVLAVNKWD-VEDSKQEKLRDLKESFERLLPQLRGAPLITVSAKTGRGLERLRA 368 Query: 205 AIL 207 AIL Sbjct: 369 AIL 371 Score = 95.2 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 24/173 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV K LA + PG T+ L + ++D Sbjct: 5 LAIVGRPNVGKSTLFNRLVG-KRLALVDDQPGVTRDLR------EGEGRLGDLRFTVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS--TLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G + D +R L+ER+ +ID R G+ D+ L K++ Sbjct: 58 AGL------EDATDDSLQSRMRRLTERAVDMADVCLFMIDARVGLTPTDEMFAEILRKRS 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + K E ++ Y E + S +G+ L Sbjct: 112 KHVILAANKA---------EGSAADAGVLEAYNLGLGEPVRLSGEHGEGMTDL 155 >gi|254423770|ref|ZP_05037488.1| GTPase, putative [Synechococcus sp. PCC 7335] gi|196191259|gb|EDX86223.1| GTPase, putative [Synechococcus sp. PCC 7335] Length = 449 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 11/192 (5%) Query: 21 IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + LP A E +A GR NVGKSS++N V + S G T+ V Sbjct: 145 VEHLPPADQIETVDEYRVAIVGRPNVGKSSILNAFVGENR-SIVSPISGTTRDAIDMVVT 203 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 ++ L+D G + + +G I R V L+ID GV Sbjct: 204 --RGDGDDQKRYRLIDTAGIRKKKNVDFGPEYFG--INRAFKAIKRADVVLLVIDALDGV 259 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + DQ + ++++ + IV+ K D + + K + + + + S++ Sbjct: 260 TEQDQKLAGRIEEEGRACVIVVNKWDAIDKDSHTIYEFDKKIEAKIHFLGWAKRLYVSAL 319 Query: 195 KRKGIEVLRKAI 206 + + + A+ Sbjct: 320 TGQRLPKILDAV 331 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 56/166 (33%), Gaps = 19/166 (11%) Query: 45 LINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNV 104 L+N + + + PG T+ + + VD G + + Sbjct: 2 LVNRFAGGRQ-SIVFDQPGVTRD------RTYQPAFWKDREFLAVDTGGLVF----DDDT 50 Query: 105 DSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP 164 + + + ++ S ++D + G + DQ++ S++ + + + + K Sbjct: 51 EFLPYIREQAMTALSEAAAALFVVDGQIGPTEGDQEIASWMRSQNIPVVLAVNKC----- 105 Query: 165 TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + E + + E S++ G L A++E + Sbjct: 106 ---ESPDEGIIQAAQFWELGLGEPYAVSAIHGSGTGELLDALVEHL 148 >gi|282880854|ref|ZP_06289547.1| ribosome-associated GTPase EngA [Prevotella timonensis CRIS 5C-B1] gi|281305236|gb|EFA97303.1| ribosome-associated GTPase EngA [Prevotella timonensis CRIS 5C-B1] Length = 437 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P A GR NVGKSS+IN + + G T+ + F Sbjct: 172 EEDIPRFAVVGRPNVGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRYDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEFYSVM--RSIHSIENSDVCILMLDATRGIESQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 + S +V+ K D + + ++ + IR P +I S++ ++ I Sbjct: 283 QRNNKSLVVVVNKWDLVEDKD-HKVIKTFENAIRERMAPFVDFPIIFASALTKQRI 337 Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 11/129 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QSRKAIVSDTAGTTRDRQY------GKCSWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ ++V V ++D ++G+ D DV L + + Sbjct: 58 GGWVVNSDDIFEDAIRKQVVVAT----EEADLVLFVVDVKNGLTDWDADVAQILRQTKLP 113 Query: 152 YQIVLTKID 160 +V K+D Sbjct: 114 VILVANKVD 122 >gi|258626728|ref|ZP_05721550.1| GTP-binding protein [Vibrio mimicus VM603] gi|258580984|gb|EEW05911.1| GTP-binding protein [Vibrio mimicus VM603] Length = 324 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V D VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETD------GNYQAIYVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVLFVVEGTH-WTADDEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + +++P S+ + K +VL+K + E + Sbjct: 140 PVVLCVNKVDQVK--DRNEVMLHMLELSKR--MQFVDIVPISAKQGKNTDVLKKHVREHL 195 >gi|291520563|emb|CBK75784.1| GTP-binding protein Era [Butyrivibrio fibrisolvens 16/4] Length = 302 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ +K +A TSN P T++ V D N+ + +D Sbjct: 9 VTIVGRPNVGKSTLMNHIIGQK-IAITSNKPQTTRNRIQTVYTD-----ENVGQIVFLDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A+ ++ S + + + LI+ V D+ + L Sbjct: 63 PGMHQAKN-----KLGEYMMSAAKSTINDVDLILWLIEPDTKVGAGDKKIAELLATAEAP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID ET++ K L EV+P S++ +G + L I + + Sbjct: 118 VILVINKIDMADGAKVGETIQAFKDL-----CDFIEVVPVSALHGEGCDDLLATIFKHL 171 >gi|281425284|ref|ZP_06256197.1| hypothetical protein HMPREF0971_02256 [Prevotella oris F0302] gi|299141484|ref|ZP_07034620.1| ribosome-associated GTPase EngA [Prevotella oris C735] gi|281400577|gb|EFB31408.1| ribosome-associated GTPase EngA [Prevotella oris F0302] gi|298576820|gb|EFI48690.1| ribosome-associated GTPase EngA [Prevotella oris C735] Length = 437 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P A GR N GKSS+IN + + G T+ + F Sbjct: 172 EDEIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRFDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D GV+ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVSEDLEFYSVM--RSIRAIENSDVCILMLDATRGVEAQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 K S +V+ K D + +Q+ ++ + IRN P +I S++ ++ I Sbjct: 283 QKNNKSLVVVVNKWDLV-EEKSQKVIDTFEAAIRNRMAPFVDFPIIFASALTKQRI 337 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 62/179 (34%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QSRRAIVSDTAGTTRDRQY------GKCSWNAKEFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K + + + L V L+D GV D+DV + L + + Sbjct: 58 GG----WVVKSDDIFEDAIRRQVLVATEEADLVLFLVDVTTGVTDWDEDVATILRRAKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + Y E S+ G L I++ + Sbjct: 114 VILVANKVD---------NSSEYYEAAEFYKLGIGEPQCISAATGGGTGDLLDMIVDKL 163 >gi|53719151|ref|YP_108137.1| GTP-binding protein EngA [Burkholderia pseudomallei K96243] gi|124383522|ref|YP_001026075.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10229] gi|126439512|ref|YP_001059220.1| GTP-binding protein EngA [Burkholderia pseudomallei 668] gi|126449445|ref|YP_001080656.1| GTP-binding protein EngA [Burkholderia mallei NCTC 10247] gi|126454834|ref|YP_001066487.1| GTP-binding protein EngA [Burkholderia pseudomallei 1106a] gi|161579520|ref|YP_103001.2| GTP-binding protein EngA [Burkholderia mallei ATCC 23344] gi|162210023|ref|YP_333745.2| GTP-binding protein EngA [Burkholderia pseudomallei 1710b] gi|167719273|ref|ZP_02402509.1| GTP-binding protein EngA [Burkholderia pseudomallei DM98] gi|167738270|ref|ZP_02411044.1| GTP-binding protein EngA [Burkholderia pseudomallei 14] gi|167815459|ref|ZP_02447139.1| GTP-binding protein EngA [Burkholderia pseudomallei 91] gi|167823871|ref|ZP_02455342.1| GTP-binding protein EngA [Burkholderia pseudomallei 9] gi|167845410|ref|ZP_02470918.1| GTP-binding protein EngA [Burkholderia pseudomallei B7210] gi|167902402|ref|ZP_02489607.1| GTP-binding protein EngA [Burkholderia pseudomallei NCTC 13177] gi|167910644|ref|ZP_02497735.1| GTP-binding protein EngA [Burkholderia pseudomallei 112] gi|167918673|ref|ZP_02505764.1| GTP-binding protein EngA [Burkholderia pseudomallei BCC215] gi|254177966|ref|ZP_04884621.1| GTPase family protein [Burkholderia mallei ATCC 10399] gi|254189054|ref|ZP_04895565.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237] gi|254259698|ref|ZP_04950752.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a] gi|254297432|ref|ZP_04964885.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e] gi|254358306|ref|ZP_04974579.1| GTP-binding protein EngA [Burkholderia mallei 2002721280] gi|81824774|sp|Q63US9|DER_BURPS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224313|sp|A3MK70|DER_BURM7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224314|sp|A2S2A6|DER_BURM9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224315|sp|A3NVW6|DER_BURP0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224316|sp|A3NA49|DER_BURP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|52209565|emb|CAH35518.1| putative GTPase [Burkholderia pseudomallei K96243] gi|124291542|gb|ABN00811.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10229] gi|126219005|gb|ABN82511.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 668] gi|126228476|gb|ABN92016.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1106a] gi|126242315|gb|ABO05408.1| ribosome-associated GTPase EngA [Burkholderia mallei NCTC 10247] gi|148027433|gb|EDK85454.1| GTP-binding protein EngA [Burkholderia mallei 2002721280] gi|157808014|gb|EDO85184.1| GTP-binding protein EngA [Burkholderia pseudomallei 406e] gi|157936733|gb|EDO92403.1| GTP-binding protein EngA [Burkholderia pseudomallei Pasteur 52237] gi|160699005|gb|EDP88975.1| GTPase family protein [Burkholderia mallei ATCC 10399] gi|254218387|gb|EET07771.1| ribosome-associated GTPase EngA [Burkholderia pseudomallei 1710a] Length = 445 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 +IA GR NVGKS+L+N L+ + + PG T+ + + + N L Sbjct: 179 GIKIAIVGRPNVGKSTLVNTLIGEDRV-IAFDMPGTTRDSIY------VDFERNGKHYTL 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 232 IDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQ 289 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D L P + T ++ + S+ ++ GI L +++ + Sbjct: 290 GRALVVGVNKWDGLDPHVRERTKADLARKLK--FLEFAKFHFISAAEKTGIGALMRSVDD 347 Query: 209 T 209 Sbjct: 348 A 348 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGARPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K E ++ T Y + S+ G+ + LE Sbjct: 112 RPIFLVVNKA---------EGMKYTAVASDFYELGLGDPRAISAAHGDGVNDMINEALE 161 >gi|33862476|ref|NP_894036.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9313] gi|41017013|sp|Q7V8X0|DER_PROMM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|33640589|emb|CAE20378.1| GTP-binding protein (HSR1-related):AAA ATPase superfamily [Prochlorococcus marinus str. MIT 9313] Length = 455 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 10/179 (5%) Query: 25 PKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P+ P ++A GR NVGKSSL+N + A S G T+ + L+ Sbjct: 172 PEEDEPIQMAIIGRPNVGKSSLLNAICGEPR-AIVSPIRGTTRDTI------DTRLEREG 224 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 L+D G R+ + +G I R L+ID GV + DQ + Sbjct: 225 HPWRLIDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDVCVLVIDALDGVTEQDQRLAG 282 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++ + +V+ K D + + + + + + Y ++ TS++ + +E + Sbjct: 283 RIEDDGRACVLVVNKWDAVEKDSHTMPMVEKELRAKLYFLDWATMLFTSALTGQRVESI 341 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 29/187 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L R A + PG T+ + + + + Sbjct: 3 RPIVAIIGRPNVGKSTLVNRLC-RSREAIVDDKPGVTRD------RTYQDGFWGDREFKV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFS 143 VD G + + + + E++ L +++D + GV D+ + Sbjct: 56 VDTGGLVFDDDSEFLPE---------IREQANLALAEASVALVIVDGQQGVTAADESIAE 106 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + + + K + + + E P S++ G L Sbjct: 107 WLRTQPCPTLVAVNKC--------ESPDQGLAMAAEFWRLGLGEPFPISAIHGAGTGDLL 158 Query: 204 KAILETI 210 +L + Sbjct: 159 DRVLSLL 165 >gi|323704187|ref|ZP_08115766.1| GTP-binding protein Era [Thermoanaerobacterium xylanolyticum LX-11] gi|323536253|gb|EGB26025.1| GTP-binding protein Era [Thermoanaerobacterium xylanolyticum LX-11] Length = 299 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 17/178 (9%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR+NVGKS+L+N L+N K +A TS+ P T++ + L + +D P Sbjct: 9 ALIGRTNVGKSTLLNALLNEK-VAITSDKPQTTRNTIQGI------LTGEDYQVIFIDTP 61 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 G PK + + +I + + + +++ V D+ + L Sbjct: 62 GI---HKPKHKLSEF--MIESVKKTLAEVDLIIYMVEPDVEVGPGDKYIIDHLINIETPV 116 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID +S T +++ K L +++P S++K I++L+ I+ I Sbjct: 117 ILVINKIDTVSHETVDMSIQIFKQL-----YNFKDILPISALKNMNIDLLKHTIVSYI 169 >gi|326389849|ref|ZP_08211413.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus JW 200] gi|325994117|gb|EGD52545.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus JW 200] Length = 302 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N ++ K +A TS P T++ + L + + VD Sbjct: 8 VALVGRTNVGKSTLLNAILQEK-IAITSPKPQTTRNTIHGI------LTTDEYQVIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + +I + + +I+ V D+ + L + Sbjct: 61 PGI---HKPKSKLSEF--MIEVAKRTLKEVDLILYMIEPDTEVGPGDRYIIEHLKEVDTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + +ET++ K +V+ S+++ K I++L++ I+ + Sbjct: 116 VILVVNKIDLVPEERVEETIKIFKEQ-----YEFKDVVAISAIENKNIDLLKEKIVSLL 169 >gi|325280073|ref|YP_004252615.1| GTP-binding protein engA [Odoribacter splanchnicus DSM 20712] gi|324311882|gb|ADY32435.1| GTP-binding protein engA [Odoribacter splanchnicus DSM 20712] Length = 435 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 13/184 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I GR NVGKSS IN L+ + ++ G T+ F Sbjct: 173 DHLPRITIVGRPNVGKSSTINALIGEERN-IVTDIAGTTRDTLNTRYNRFGY------DF 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G ++V+ + + R + LLID G++ D ++F ++ Sbjct: 226 LLVDTAGLRKKAKVSEDVEFYSVM--RSIRAIEESDVCILLIDATRGMEAQDLNIFHLIE 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLRK 204 + IV+ K D + +TL + + +R P ++I S++ ++ + + + Sbjct: 284 RNRKGVVIVVNKWDLVEKDG--KTLIEYEKSLREKIAPFKDVDIIFASALTKQRLLKVLE 341 Query: 205 AILE 208 A L+ Sbjct: 342 AALQ 345 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 63/176 (35%), Gaps = 19/176 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV + A + G T+ N+ N +++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGTRK-AIVNEESGVTRDRNY------GKSSWNGKDFSVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 GY + +I + ++D GV +DQ+ L Sbjct: 58 GGYVSNSDDIFEEEINKQVI----LALDEADVILFMVDAEIGVTDLDQNFARLLRNIDKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K+D + E + + I+ ++ SSV G L ++ Sbjct: 114 VYLVANKVD--NHERLYEAQDFYRLGIK------GDLFCISSVSGSGTGDLLDQVV 161 >gi|160931619|ref|ZP_02079014.1| hypothetical protein CLOLEP_00451 [Clostridium leptum DSM 753] gi|156869490|gb|EDO62862.1| hypothetical protein CLOLEP_00451 [Clostridium leptum DSM 753] Length = 440 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 9/181 (4%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ N GKSSLIN + S+ G T+ + ++N+ L+D Sbjct: 180 VAVIGKPNAGKSSLINQIAGEDR-CIVSDIAGTTRDAI------DTQIENDYGRFTLIDT 232 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ + + + +RS ++ID G + D V + Sbjct: 233 AGIRRKSRVDDEIEKYSVIRAQMAIDRSD--VCVIMIDATEGFTEQDSKVAGLAHEAGKG 290 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 I + K D + + K + A+ ++ S+ + ++ L + I N Sbjct: 291 CVIAVNKWDAVEKDGRTMQEYRKKLEVDFSFMAYAPMVFISAKTGQRLDQLFELIQRVAN 350 Query: 212 Y 212 + Sbjct: 351 F 351 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 66/180 (36%), Gaps = 19/180 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L N L+ ++ +A ++ PG T+ + + + Sbjct: 2 SMPVVAIVGRPNVGKSTLFNKLIGQR-VAIVNDTPGVTRDRIY------GECEWRSRKVT 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 LVD G P + + + T + L+ D + GV D +V + L K Sbjct: 55 LVDTGGI----EPYSDDVILSQMRRQAELAIDTADVIVLVTDVKTGVVATDSEVAAMLLK 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K D + A Y + I SSV G L A+ Sbjct: 111 SGRPVVLCVNKCDGIGEPPA--------EFYEFYNLGLGDPIQVSSVHGHGTGDLLDAVF 162 >gi|261211554|ref|ZP_05925842.1| GTP-binding protein Era [Vibrio sp. RC341] gi|260839509|gb|EEX66135.1| GTP-binding protein Era [Vibrio sp. RC341] Length = 324 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V + VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETE------GKYQAIYVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVLFVVEGTH-WTADDEMVFTKLQKANF 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + P +++P S+ + K +VL+K + E + Sbjct: 140 PVVLCVNKVDQVK--DRNEVMLHMLELSKRMP--FVDIVPISAKQGKNTDVLKKHVREHL 195 >gi|254179556|ref|ZP_04886155.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655] gi|184210096|gb|EDU07139.1| GTP-binding protein EngA [Burkholderia pseudomallei 1655] Length = 445 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 +IA GR NVGKS+L+N L+ + + PG T+ + + + N L Sbjct: 179 GIKIAIVGRPNVGKSTLVNTLIGEDRV-IAFDMPGTTRDSIY------VDFERNGKHYTL 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 232 IDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQ 289 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D L P + T ++ + S+ ++ GI L +++ + Sbjct: 290 GRALVVGVNKWDGLDPHVRERTKADLARKLK--FLEFAKFHFISAAEKTGIGALMRSVDD 347 Query: 209 T 209 Sbjct: 348 A 348 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGARPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K E ++ T Y + S+ G+ + LE Sbjct: 112 RPIFLVVNKA---------EGMKYTAVASDFYELGLGDPRAISATHGDGVNDMINEALE 161 >gi|261416631|ref|YP_003250314.1| ribosome-associated GTPase EngA [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373087|gb|ACX75832.1| ribosome-associated GTPase EngA [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326129|gb|ADL25330.1| ribosome-associated GTPase EngA [Fibrobacter succinogenes subsp. succinogenes S85] Length = 475 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 71/182 (39%), Gaps = 10/182 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P A GR N GKS+L+N L+N A S+ PG T+ + + Sbjct: 175 EERPVRFAILGRPNAGKSTLLNRLLNEDR-AVVSDIPGTTRDSI------DCDFVVDGQK 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + D G + V+ + + RS L L++DC G++ D + + + Sbjct: 228 FVVTDTAGLRKKARVEDEVEVFSNMRTLESIRRSDLS--VLVVDCTRGMEIQDYRIITEI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTSSVKRKGIEVLRK 204 K +VL K D L + K L+ P ++ S+ + + + + + Sbjct: 286 RKAGKGLVVVLNKWDILPNKNDKSFDHMVKELLEREPMLEFVPILSISAKEGQRVGRVIQ 345 Query: 205 AI 206 AI Sbjct: 346 AI 347 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 19/168 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P + GR NVGKSSL N ++ R+ A S+ G T+ + + N + Sbjct: 3 LPIVCIIGRPNVGKSSLFNRILGRRA-AVVSDRDGVTRD------RHYQNAIYKGHEFTV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G+ + DS I ++E V ++D R G+ ++DQ + K Sbjct: 56 VDTGGFLPDDSIDVLADSVRAQIFNAVNE---ADLVLFMVDIRVGITKLDQQFARLIRKL 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 +V K + QE+ E K + S++ Sbjct: 113 DKKVILVANKSEL--QGDRQESYEFLK-------LGFGQPRTVSALTG 151 >gi|303248222|ref|ZP_07334485.1| ribosome-associated GTPase EngA [Desulfovibrio fructosovorans JJ] gi|302490360|gb|EFL50271.1| ribosome-associated GTPase EngA [Desulfovibrio fructosovorans JJ] Length = 443 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 19/198 (9%) Query: 16 RGVPEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + P LP +A GR N GKSSL+N L+ ++ L S+ G T+ Sbjct: 166 KETPGEEALPAPEAGIRLAVLGRPNAGKSSLVNELLGQERL-IVSDVAGTTRD-----AV 219 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + +KN VD G ++ + + + L ++ID GV Sbjct: 220 DVALVKNGRR-YVFVDTAGVRKRTRITDGLERYS--VGKALGSAKRANVAVVVIDATGGV 276 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 D+ + S+LDK+ + I + KID + + + +R H V+ S+ Sbjct: 277 GVQDKRLISYLDKERTPFLIAVNKIDLVPQKDMIALRKDIQDELRM--CGHVPVLYISAA 334 Query: 195 KRKGI-------EVLRKA 205 +RKGI E + K Sbjct: 335 QRKGIGKVLPMAEEIWKE 352 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP +A GR NVGKS+L N L R A T + PG T+ + ++ + L Sbjct: 2 PPIVAIVGRPNVGKSTLFNRLAKRPK-AITHDRPGVTRDRL------EATVELGDRIVTL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++V+ + V L+D + G +D ++ L + Sbjct: 55 IDTGGMDFDAPEGLERQ----IVVQAEIALTMADVVLFLVDGKAGRTAMDDEMAERLRRA 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D E+ L ++ ++P S+ G++ L + + + Sbjct: 111 GKPVIVAVNKVD---------GSERIPALTGDFHAWGFPILPLSAAHGHGLQDLAETLAK 161 Query: 209 TI 210 + Sbjct: 162 AL 163 >gi|296136228|ref|YP_003643470.1| ribosome-associated GTPase EngA [Thiomonas intermedia K12] gi|295796350|gb|ADG31140.1| ribosome-associated GTPase EngA [Thiomonas intermedia K12] Length = 457 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 71/183 (38%), Gaps = 11/183 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ +A +GR NVGKS+L+N LV + + + PG T+ + + Sbjct: 187 PREHSLRLAIAGRPNVGKSTLVNALVGEERV-IAFDMPGTTRDAI------EVPFERDGR 239 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V LL+D GV D + SF Sbjct: 240 KFILIDTAGLRRKGKVFEAVEKFS--VIKTLQAIEQANVVVLLLDATEGVSDQDAHIASF 297 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + + K D + + + + + + + S+ G+ L K Sbjct: 298 AVEAGRALVLAANKWDAVDTYGRERLMVAIRQRLP--FVSFAKFHSISARTGSGLNGLMK 355 Query: 205 AIL 207 +++ Sbjct: 356 SVI 358 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 20/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P ++ GR NVGKS+L N + ++ A ++ PG T+ + + L+ + +V Sbjct: 3 PIVSLVGRPNVGKSTLFNRMTRSRD-AIVADMPGLTRD------RHYGMLRMADRPVIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ V + ++E V L+D R G+ D + + L K Sbjct: 56 DTGGFEPV-VDTGIVHQMARQTRQAIAES---DLVVFLVDLRTGLSPQDLHIAAELRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K E L + E S+ + L IL+ Sbjct: 112 KPILLAVNKA---------EGRHGHAALAEFHELGLGEPFSISAAHGDSVPDLLDRILQA 162 Query: 210 I 210 + Sbjct: 163 L 163 >gi|107029013|ref|YP_626108.1| GTP-binding protein EngA [Burkholderia cenocepacia AU 1054] gi|116689829|ref|YP_835452.1| GTP-binding protein EngA [Burkholderia cenocepacia HI2424] gi|170733168|ref|YP_001765115.1| GTP-binding protein EngA [Burkholderia cenocepacia MC0-3] gi|123370031|sp|Q1BGX0|DER_BURCA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224312|sp|A0K7T2|DER_BURCH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238688579|sp|B1JT88|DER_BURCC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|105898177|gb|ABF81135.1| Small GTP-binding protein domain protein [Burkholderia cenocepacia AU 1054] gi|116647918|gb|ABK08559.1| small GTP-binding protein [Burkholderia cenocepacia HI2424] gi|169816410|gb|ACA90993.1| small GTP-binding protein [Burkholderia cenocepacia MC0-3] Length = 445 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGIKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L S V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D L ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHFI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVATDFYELGLGDPRAISAAHGDGV 152 >gi|300087240|ref|YP_003757762.1| ribosome-associated GTPase EngA [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526973|gb|ADJ25441.1| ribosome-associated GTPase EngA [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 439 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 74/185 (40%), Gaps = 21/185 (11%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P +A GR NVGKS+L+N L R+ A T + PG T+ + + + ++ Sbjct: 2 TKLPSVAIVGRQNVGKSTLLNRLTGRRQ-AITQDLPGTTRD------RMYVPVSHSGREF 54 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G A D + + + + L + R G+ D+++ + Sbjct: 55 LLVDTGG----MAGGDTGDVFTPAVNEQVRIAMREASVIVFLTEARFGLTPQDEEIAEEV 110 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + +V+ K+D Q + I + E +P S+ +G + L Sbjct: 111 RRSSKPVILVVNKVD----NDRQGH-----HAIEFHALGMGEPVPVSAYHGRGTDALLDR 161 Query: 206 ILETI 210 ++E + Sbjct: 162 VVELL 166 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 12/185 (6%) Query: 19 PEIGLLP-KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P LP + IA +GR+NVGKSSL+N LV A S PG T+ + Sbjct: 167 PAEEALPTEPERLRIAIAGRANVGKSSLLNTLVGEDR-AIVSPVPGTTRDAV------DT 219 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + L+D G ++ V+ + ++R L V +++D Sbjct: 220 PIDFGTGGVVLIDTAGIRRRGRIERGVEEYS--VIRSLHAIDRADVVLIVLDAGEPATAQ 277 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 D + + +K +V+ K D L E + + P A I S++ + Sbjct: 278 DTHIAGYAREKCRGLILVVNKSDLLKEVDMAEFDKNMASRFKFIPYARQ--INVSALSGE 335 Query: 198 GIEVL 202 G++ + Sbjct: 336 GVDKI 340 >gi|302866909|ref|YP_003835546.1| ribosome-associated GTPase EngA [Micromonospora aurantiaca ATCC 27029] gi|315506749|ref|YP_004085636.1| ribosome-associated gtpase enga [Micromonospora sp. L5] gi|302569768|gb|ADL45970.1| ribosome-associated GTPase EngA [Micromonospora aurantiaca ATCC 27029] gi|315413368|gb|ADU11485.1| ribosome-associated GTPase EngA [Micromonospora sp. L5] Length = 468 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 21/199 (10%) Query: 12 WIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 W+ LR P P +A GR NVGKS+L+N ++ R+ A + PG T+ + Sbjct: 8 WVELREPEADSGEPTGPQPVVAVVGRPNVGKSTLVNRIIGRRQ-AVVEDIPGVTRDRVPY 66 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 + + N A +VD G+ D + + T V ++D Sbjct: 67 ------DAQWNGRAFTVVDTGGWEP-----DAKDRAAAIAAQAEIAVVTADVVLFVVDAM 115 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 G +D+ L + A +V K D T+E + + E P Sbjct: 116 VGSTDVDEAAVKMLRRSAKPVILVANKAD-------NTTIEMEATSL--WSLGLGEPFPV 166 Query: 192 SSVKRKGIEVLRKAILETI 210 S++ +G L AIL+ + Sbjct: 167 SALHGRGSGDLLDAILDAL 185 Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 68/196 (34%), Gaps = 15/196 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P+I GP +A GR NVGKSSL+N + A + G T S Sbjct: 188 APKIVENRPRGPRRVALVGRPNVGKSSLLNRFSGEER-AVVDSVAGTTVDPV------DS 240 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ LVD G + + L S +LID + + Sbjct: 241 LVEIGGETWQLVDTAGLRKRVGKASGTEYYASLRTA--SAIEAAEVAVVLIDSSEVISEQ 298 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + + + + + I K D + ++ +R P A + S+ + Sbjct: 299 DQRILTMVVESGRALVIAFNKWDLVDGDRRYYLDKEIDRELRRIPWAIR--LNLSAKTGR 356 Query: 198 GIEV----LRKAILET 209 ++ LRKA+ Sbjct: 357 AVDKLAPALRKALASW 372 >gi|213581531|ref|ZP_03363357.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 162 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 >gi|254248074|ref|ZP_04941395.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184] gi|124872850|gb|EAY64566.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184] Length = 445 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGIKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L S V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D L ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHFI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGERPYLIV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVATDFYELGLGDPRAISAAHGDGV 152 >gi|123967979|ref|YP_001008837.1| GTP-binding protein EngA [Prochlorococcus marinus str. AS9601] gi|166225839|sp|A2BPL9|DER_PROMS RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123198089|gb|ABM69730.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str. AS9601] Length = 457 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 19/199 (9%) Query: 21 IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 IG LP+ + ++ GR NVGKSSL+N + K A S+ G T Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKR-AIVSDISGTTTDSI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + +K ++D G + K + +G I R L+ID GV Sbjct: 216 -DTLIKKGDNNWKIIDTAGIRRKKNVKYGTEFFG--INRAFKSIDRSDVCVLVIDAVDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTS 192 DQ + ++++ + IV+ K D + T+ + + +R+ Y ++I S Sbjct: 273 TDQDQKLAGRIEEQGRACIIVVNKWDLIEKN--SSTIYQVEKELRSKLYFLHWSKMIFIS 330 Query: 193 SVKRKGIEVLRKAILETIN 211 ++ + ++ + + L +N Sbjct: 331 ALTGQRVDNIFEHALNAVN 349 Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L+N L + N A + PG T+ + + N + Sbjct: 3 LPTIAIIGRPNVGKSTLVNRLC-QSNDAIVFDKPGVTRD------RTYQNASWGGKEFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + L++D GV D + +L Sbjct: 56 VDTGGLVFDDESEFLPEIRTQV----FLALEEASLALLVVDGNQGVTDGDLSIAKWLRNS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K + T + E P S++ G L ++ Sbjct: 112 SCKTIVAVNKC--------ESTTLGISLASEFWKLGLGEPNPVSAIHGSGTGDLLDLVI 162 >gi|90408609|ref|ZP_01216764.1| GTP-binding protein EngA [Psychromonas sp. CNPT3] gi|90310301|gb|EAS38431.1| GTP-binding protein EngA [Psychromonas sp. CNPT3] Length = 488 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 81/197 (41%), Gaps = 15/197 (7%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 LR + LP ++A G+ NVGKS+LIN ++ + + + PG T+ + Sbjct: 189 LREQQRLADLP----IKLAIIGKPNVGKSTLINRILGEERVV-VFDQPGTTRDSIYI--- 240 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + L+D G + + V+ + +++ L V L+ID R G+ Sbjct: 241 ---PMSRDDREYILIDTAGVRKRKKVNETVEKFS--VIKTLKAIEDANVVLLVIDARDGI 295 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + + S I + K D ++ + KT+ R ++ S++ Sbjct: 296 AEQDLCLLGYTLNSGRSLVIAVNKWDGMTDYDKERV--KTELDRRLGFIDFAKIHFISAL 353 Query: 195 KRKGIEVLRKAILETIN 211 G+ L +++ E + Sbjct: 354 HGTGVGHLYESVEEAYD 370 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 24/183 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + K + + Sbjct: 2 LPVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GQAKLDEDEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G ++ + L+ V ++D R G+ DQ + L K+ Sbjct: 55 IDTGGITGDEEGIDSLMAGQSLL-----AIDEADAVLFMVDARVGLMVADQAIADHLRKQ 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 IV K D + +A Y EV ++ KG+ RK I Sbjct: 110 EKKVFIVANKTDGIDADSACA---------EFYALGLGEVYHIAAAHGKGV---RKMIDT 157 Query: 209 TIN 211 ++ Sbjct: 158 ALD 160 >gi|56421023|ref|YP_148341.1| GTP-binding protein [Geobacillus kaustophilus HTA426] gi|56380865|dbj|BAD76773.1| GTP-binding protein [Geobacillus kaustophilus HTA426] Length = 302 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ +N ++ +K +A S+ P T++ V D + + +D Sbjct: 11 VAIIGRPNVGKSTFLNRVIGQK-IAIMSDKPQTTRNKIQGVYTD------DDAQIIFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ L+ + + +++ G + + + L + Sbjct: 64 PGV---HKPKHKLGDF--MMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLKEVDTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID++ P +++ K L YP E++P S+++ ++ L + I E + Sbjct: 119 VFLVINKIDRVHPDELLPLIDRYKDL---YP--FAEIVPISALEGNNVDRLLEQIKERL 172 >gi|184159115|ref|YP_001847454.1| GTP-binding protein Era [Acinetobacter baumannii ACICU] gi|183210709|gb|ACC58107.1| GTPase [Acinetobacter baumannii ACICU] Length = 342 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID + Q D V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDAQ-KWTQNDDLVLEKLKNADM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 149 PVILVINKADTFGDKREILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 204 Query: 211 NY 212 Y Sbjct: 205 PY 206 >gi|282890013|ref|ZP_06298547.1| hypothetical protein pah_c009o032 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500105|gb|EFB42390.1| hypothetical protein pah_c009o032 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 493 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 75/175 (42%), Gaps = 11/175 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSLIN L++ + S PG T+ + +N A L+D Sbjct: 185 IAIIGRPNVGKSSLINYLLDEQR-CIVSPIPGTTRDSV------DVSFTHNEHAYTLIDT 237 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + VD + + R+ + + L D + G+ ++ + + +++ Sbjct: 238 AGIRRKHSEHEVVDKFAAIRTERAIARADICLLVL--DSQQGITVQEKRIANLIEEAGKG 295 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ K D + + L++ + ++ P++ S+ + +E + + I Sbjct: 296 CILLFNKWDLVKGFRMEHCLKEIESE-ASFLNHCPKIFM-SAKTGRNVEKIFEEI 348 Score = 91.8 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 68/188 (36%), Gaps = 20/188 (10%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + L + P++A GR NVGKS+L N + +K +A A G T+ + F Sbjct: 1 MKDLIMSRLPKLALVGRPNVGKSALFNKICGKK-IAIVDEAEGVTRDRLYAEADLFGRHF 59 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + + + K+ + + +++D G+ +D + Sbjct: 60 QVIDTGGINPRSDAPFNEEVKRQAEI----------AIEEADTIVMVVDSHVGLTALDHE 109 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 V L + + + + KID +QE L + + S+ + I Sbjct: 110 VAQILLRTSKPLCLAVNKID----HPSQEHLIYEFQSLGITNK-----VAVSATQSWRIA 160 Query: 201 VLRKAILE 208 L +A L+ Sbjct: 161 ELLEAALD 168 >gi|325524779|gb|EGD02753.1| GTP-binding protein Der [Burkholderia sp. TJI49] Length = 445 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGIKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L S V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D L + ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGLDEHARERAKADLTRKLKFLDFAKSHFI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKTIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVATDFYELGLGDPRAISAAHGDGV 152 >gi|332875944|ref|ZP_08443730.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6014059] gi|323519011|gb|ADX93392.1| GTP-binding protein Era [Acinetobacter baumannii TCDC-AB0715] gi|332735810|gb|EGJ66851.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6014059] Length = 340 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 40 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 92 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID + Q D V L + Sbjct: 93 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDAQ-KWTQNDDLVLEKLKNADM 146 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 147 PVILVINKADTFGDKREILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 202 Query: 211 NY 212 Y Sbjct: 203 PY 204 >gi|221198076|ref|ZP_03571122.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2M] gi|221204366|ref|ZP_03577383.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2] gi|221212773|ref|ZP_03585749.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD1] gi|221166986|gb|EED99456.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD1] gi|221175223|gb|EEE07653.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2] gi|221182008|gb|EEE14409.1| ribosome-associated GTPase EngA [Burkholderia multivorans CGD2M] Length = 445 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGIKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L S V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D L + ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGLDEHARERAKADLTRKLKFLDFAKSHFI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGARPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVATDFYELGLGDPRAISAAHGDGV 152 >gi|124023844|ref|YP_001018151.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9303] gi|123964130|gb|ABM78886.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str. MIT 9303] Length = 461 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 16/189 (8%) Query: 21 IGLLPK-------AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LLP P ++A GR NVGKSSL+N + A S G T+ Sbjct: 168 LSLLPPKHEEAEEDEPIQMAIIGRPNVGKSSLLNAICGEPR-AIVSPIRGTTRDTI---- 222 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L+ L+D G R+ + +G I R L+ID G Sbjct: 223 --DTRLEREGHPWRLIDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDVCVLVIDALDG 278 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + DQ + ++ + +V+ K D + + + + + + Y ++ TS+ Sbjct: 279 VTEQDQRLAGRIEDDGRACVLVVNKWDAVEKDSHTMPMVEKELRAKLYFLDWATMLFTSA 338 Query: 194 VKRKGIEVL 202 + + +E + Sbjct: 339 LTGQRVESI 347 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 29/187 (15%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L R A + PG T+ + + + + Sbjct: 9 RPIVAIIGRPNVGKSTLVNRLC-RSREAIVDDKPGVTRD------RTYQDGFWGDREFKV 61 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC-----VYLLIDCRHGVKQIDQDVFS 143 VD G + + + + E++ L +++D + GV D+ + Sbjct: 62 VDTGGLVFDDDSEFLPE---------IREQANLALAEASVALVIVDGQQGVTAADESIAE 112 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +L + + + K + + + E P S++ G L Sbjct: 113 WLRMQPCPTLVAVNKC--------ESPDQGLAMAAEFWRLGLGEPFPISAIHGAGTGDLL 164 Query: 204 KAILETI 210 +L + Sbjct: 165 DRVLSLL 171 >gi|331090851|ref|ZP_08339697.1| GTP-binding protein engA [Lachnospiraceae bacterium 2_1_46FAA] gi|330399710|gb|EGG79372.1| GTP-binding protein engA [Lachnospiraceae bacterium 2_1_46FAA] Length = 442 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P IA G+ NVGKSS+IN L + S+ G T+ + + N Sbjct: 174 EDDRPRIAIVGKPNVGKSSIINKLQGDNRV-IVSDIAGTTRDAI------DTPITYNGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ V ++ID GV + D + Sbjct: 227 YVFIDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLIVIDATEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 ++ IV+ K D + +T+ + + +R + P E++ S+ + + L Sbjct: 285 HERGKGIIIVVNKWDAIEKHD--KTMYEYEKQVRQVLSYMPYAEIMYVSAHTGQRLNKLY 342 Query: 204 KAI 206 + I Sbjct: 343 EKI 345 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ + PG T+ + L+ Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGE-MISIVKDTPGVTRDRIYAEVNWLDK------EFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + T + L D + G+ D V L + Sbjct: 57 DTGGI----EPDSKDIILSQMREQAQIAIDTADVIIFLTDVKQGLVDSDSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + Q+ + Y + P S+ R GI + +++ Sbjct: 113 KPVVLVVNKVD-----SFQKFMADVYEF---YNLGIGDPFPISASSRLGIGDMLDEVVKH 164 >gi|257873989|ref|ZP_05653642.1| GTP-binding protein engA [Enterococcus casseliflavus EC10] gi|257808153|gb|EEV36975.1| GTP-binding protein engA [Enterococcus casseliflavus EC10] Length = 436 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 12/185 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + + GR NVGKSSLIN ++ + + S+ G T+ D + Sbjct: 171 DDSIIKFSLIGRPNVGKSSLINAILGEERV-IVSDIEGTTRDAI-----DTHFTSESGQE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + + R + V ++++ G+++ D+ + + Sbjct: 225 FTMIDTAGMRKKGKVYESTEKYSVM--RAMRAIERSDVVLMVLNAEEGIREQDKRIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D L T T+ + IR+ + +I S+V ++ + L Sbjct: 283 HEAGRGIIIVVNKWDTLKKET--NTMRDFEEEIRDEFQYLDYAPIIFVSAVTKQRLNKLP 340 Query: 204 KAILE 208 + I E Sbjct: 341 QLIEE 345 Score = 91.4 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N + + ++ + PG T+ + + +++ Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGER-ISIVEDTPGVTRDRIYATGEWLG------REFSVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + P + I + + R GV D+ V L K Sbjct: 57 DTGGIDLSDEPFMDQIKHQAEI-----AIDEADVIVFITSAREGVTDADELVARLLYKSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y + P S GI + Sbjct: 112 KPVILAVNKVD---------NPEMRTDIYEFYGLGLGDPYPISGSHGLGIGDVLDE 158 >gi|217967546|ref|YP_002353052.1| small GTP-binding protein [Dictyoglomus turgidum DSM 6724] gi|217336645|gb|ACK42438.1| small GTP-binding protein [Dictyoglomus turgidum DSM 6724] Length = 436 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 13/189 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++AF GR N GKSSL+N L+ R + S PG T+ + DF+ K Sbjct: 174 EDKSIKLAFVGRPNSGKSSLLNALIGRDR-SIVSEIPGTTRDA-VDLIWDFNGKK----- 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD PG ++ ++ + + L + ++ID G+++ ++ + ++ Sbjct: 227 YIIVDTPGLRRPAKVEEGLEELS--VQKTLQTIRRIDIAIMVIDLSVGIREQEKRILHYI 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR-- 203 + K S IV K D + + EK I P + TS+++ ++ + Sbjct: 285 EDKGKSCLIVFNKTDLIPSLKERREFEKIVPQILQPFDYFPFIF-TSAIRNYNVKKILPW 343 Query: 204 -KAILETIN 211 + E N Sbjct: 344 VDKLFELRN 352 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 23/186 (12%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K G P ++ GR NVGKS L N +V + A ++ PG T+ + ++ Sbjct: 2 KKGVPVVSIVGRPNVGKSVLFNRIVGEEK-AIVADEPGVTRDPLVHL------CEHEGKY 54 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTL-RCVYLLIDCRHGVKQIDQDVFSF 144 LVD G+G D LI + E + + ++D R + +D + Sbjct: 55 FYLVDSAGWG-------LTDDLSELIQEKIQEVINISDLILFVVDGRSELTALDHEFVDI 107 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L K +V+ K+ + +++ +YL E P S++ ++ + L Sbjct: 108 LRKSGKRVILVVNKM--------EGRIDREEYLAPFTALGLGEPFPISALHKQNLYELLD 159 Query: 205 AILETI 210 I+ I Sbjct: 160 LIISLI 165 >gi|303327492|ref|ZP_07357933.1| ribosome-associated GTPase EngA [Desulfovibrio sp. 3_1_syn3] gi|302862432|gb|EFL85365.1| ribosome-associated GTPase EngA [Desulfovibrio sp. 3_1_syn3] Length = 452 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 11/179 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P +A GR N GKSSLIN L + + S+ G T+ + + Sbjct: 185 PAPPALRLAMLGRPNAGKSSLINALAGEERM-IVSDVAGTTRDSV------DVRFRRDGQ 237 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G +V+ + + + + L +D GV Q D+ + Sbjct: 238 DYVFVDTAGVRRRTRITDSVEKYS--VNAAIKSSTKADVTLLTLDATEGVSQQDKRLMDM 295 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 LD + + +++ K D + + + H ++ S+ G++ + Sbjct: 296 LDTRKTPFMVLINKCDLIPAAALAALKKNITETLA--FCGHVPILAVSARTGTGLKKIL 352 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 21/190 (11%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P I GR NVGKS+L N L+ R N A T + PG T+ V + + +LP+ Sbjct: 3 ETLPYIVLVGRPNVGKSTLFNRLI-RSNRAITHDRPGVTRDRMEGVVR-----RKDLPSF 56 Query: 87 ALVDMPGYGYAR------APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 +VD G P+ ++ + + + V ++D R G+ +D+ Sbjct: 57 GIVDTGGITLDAHAAVTEGPEGIRGFERDILAQAEAALAGAAAVAFVVDGRDGLLPLDEH 116 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + + + + V+ K+D +E L+ + + + ++P S+ I Sbjct: 117 LAAHIRRMGLPTLCVVNKVD----GEEREDLQ-----MAEFHSLGFPLLPVSAEHGYNIN 167 Query: 201 VLRKAILETI 210 L + + + Sbjct: 168 ALCEDLAALL 177 >gi|256823051|ref|YP_003147014.1| small GTP-binding protein [Kangiella koreensis DSM 16069] gi|256796590|gb|ACV27246.1| small GTP-binding protein [Kangiella koreensis DSM 16069] Length = 467 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 69/184 (37%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 KA ++A GR NVGKS+L+N + + + + PG T+ + ++ Sbjct: 177 KAQGLKLAIVGRPNVGKSTLVNRFLGEERVV-VYDLPGTTRDSIYI------EMERRDKK 229 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+ V+ + L + L +++D R + D + S++ Sbjct: 230 YTLIDTAGVRRRGKVKETVEKFSVL--KTLQAIDDSNVSIMVMDAREPITDQDLSLISYI 287 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 S I + K D ++ + + + S++ + L ++ Sbjct: 288 IDSGRSMVIAINKWDGMTEEQRDTVKHEIDRRLG--FIDFARIHFISALHGSNVGHLWES 345 Query: 206 ILET 209 + E Sbjct: 346 VDEA 349 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L + A +N PG T+ + + Sbjct: 2 LPVIALVGRPNVGKSTLFNRLT-KSRDALVANLPGLTRDRQYGQAT------LKGQKFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +D G + + L + V L+D R G+ D+ V L ++ Sbjct: 55 VDTGGI---AGDEEGID--GLMAGQSLLAITEANIVLFLVDARTGMTAADEFVADHLRRQ 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +++ K+D + A L Y + V+P ++ +G+ L I + Sbjct: 110 NKPIIVLVNKVDGIHADAA---------LSDYYSLGYQTVLPLAAAHGRGVNTLVDTIFD 160 Query: 209 TIN 211 ++ Sbjct: 161 ELH 163 >gi|332284650|ref|YP_004416561.1| GTP-binding protein [Pusillimonas sp. T7-7] gi|330428603|gb|AEC19937.1| GTP-binding protein [Pusillimonas sp. T7-7] Length = 478 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 75/182 (41%), Gaps = 11/182 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P + ++A GR NVGKS+LIN L+ + + PG T+ + N Sbjct: 208 PVSHRIKLAIVGRPNVGKSTLINTLLGEDRV-IAFDMPGTTRDAIEI------EFERNGV 260 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 + L+D G + ++ + +++ L V L++D + + D + F Sbjct: 261 SYTLIDTAGLRRRGKVFEAIEKFS--VIKTLQAIEACNVVVLMLDAQTEISDQDAHIAGF 318 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + + + + K D L + + + + ++ S++K +G+ VL K Sbjct: 319 VLETGRALVVAINKWDGLDSEQRERIQRDFDRKL--HFLSFAKMHTVSALKGQGVNVLIK 376 Query: 205 AI 206 ++ Sbjct: 377 SV 378 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 59/186 (31%), Gaps = 29/186 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N + R A ++ G T+ + + + V Sbjct: 8 PVVALVGRANVGKSTLFNRIT-RSRAALVADFSGLTRD------RHYGEGRVGEHPFIAV 60 Query: 90 DMPGYGYARAPK---KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + I V L+D R GV D ++ L Sbjct: 61 DTGGFEPVAKDGILLEMARQTQQAIAES-------DVVIFLVDARAGVNAHDHEIARLLR 113 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + + K E + + E S+ G+ L I Sbjct: 114 KSGQRVFLAVNKA---------EGMRYGSATAEFHELGLGEPHAISASHGDGVVEL---I 161 Query: 207 LETINY 212 ++Y Sbjct: 162 ERALSY 167 >gi|325571137|ref|ZP_08146709.1| ribosome-associated GTPase EngA [Enterococcus casseliflavus ATCC 12755] gi|325156222|gb|EGC68408.1| ribosome-associated GTPase EngA [Enterococcus casseliflavus ATCC 12755] Length = 436 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 12/185 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + + GR NVGKSSLIN ++ + + S+ G T+ D + Sbjct: 171 DDSIIKFSLIGRPNVGKSSLINAILGEERV-IVSDIEGTTRDAI-----DTHFTSESGQE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + + R + V ++++ G+++ D+ + + Sbjct: 225 FTMIDTAGMRKKGKVYESTEKYSVM--RAMRAIERSDVVLMVLNAEEGIREQDKRIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D L T T+ + IR+ + +I S+V ++ + L Sbjct: 283 HEAGRGIIIVVNKWDTLKKET--NTMRDFEEEIRDEFQYLDYAPIIFVSAVTKQRLNKLP 340 Query: 204 KAILE 208 + I E Sbjct: 341 QLIEE 345 Score = 91.8 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N + + ++ + PG T+ + + +++ Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGER-ISIVEDTPGVTRDRIYATGEWLG------REFSVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + P + I + + R GV D+ V L K Sbjct: 57 DTGGIDLSDEPFMDQIKHQAEI-----AIDEADVIVFITSAREGVTDADELVARLLYKSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y + P S GI + Sbjct: 112 KPVILAVNKVD---------NPEMRNDIYEFYGLGLGDPYPISGSHGLGIGDVLDE 158 >gi|95930678|ref|ZP_01313412.1| GTP-binding protein Era [Desulfuromonas acetoxidans DSM 684] gi|95133330|gb|EAT14995.1| GTP-binding protein Era [Desulfuromonas acetoxidans DSM 684] Length = 303 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 74/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ +K +A T+N P T++ + + + +D Sbjct: 16 VSIVGRPNVGKSTLLNQILGQK-IAITANKPQTTRNRILGI------HSEDNAQVLFLDT 68 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A ++ + LS + V L++ V D + L + + Sbjct: 69 PGIHKATG-----KLNQYMVDQALSACRGVDVVVFLVEATDRVGGGDDFILDVLAQSDIP 123 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D + + + E+IP S++ G+E L ++ + + Sbjct: 124 VVLVINKVDLVEKDKLLPLIAQYAERF-----DFKEIIPLSALNGSGVERLVASVRDML 177 >gi|74318103|ref|YP_315843.1| GTPase [Thiobacillus denitrificans ATCC 25259] gi|74057598|gb|AAZ98038.1| GTPase [Thiobacillus denitrificans ATCC 25259] Length = 297 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N LV +K ++ TS T+H + + VD Sbjct: 12 VAIVGRPNVGKSTLLNRLVGQK-VSITSRKAQTTRHRVMGI------HTTDRAQFVFVDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG+ N + S V +L++ + + D+ V L K Sbjct: 65 PGFQTRHTSTMNRAMNKRVRE----TLSDTDVVMMLVEAGR-LTREDRQVMELL-PKDRP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D+ + + + + A E++P S+ + ++ L K + + + Sbjct: 119 LLLVVNKVDQAK--DRAALMAYLQQVAAAH--AFTEIVPVSAKQGSNLDELLKTLEKHL 173 >gi|115351797|ref|YP_773636.1| GTP-binding protein EngA [Burkholderia ambifaria AMMD] gi|170702835|ref|ZP_02893684.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10] gi|171321331|ref|ZP_02910290.1| small GTP-binding protein [Burkholderia ambifaria MEX-5] gi|122323095|sp|Q0BEX1|DER_BURCM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|115281785|gb|ABI87302.1| small GTP-binding protein [Burkholderia ambifaria AMMD] gi|170132253|gb|EDT00732.1| small GTP-binding protein [Burkholderia ambifaria IOP40-10] gi|171093388|gb|EDT38576.1| small GTP-binding protein [Burkholderia ambifaria MEX-5] Length = 445 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGIKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L S V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D L ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHQMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVATDFYELGLGDPRAISAAHGDGV 152 >gi|194016775|ref|ZP_03055388.1| ribosome-associated GTPase EngA [Bacillus pumilus ATCC 7061] gi|194011381|gb|EDW20950.1| ribosome-associated GTPase EngA [Bacillus pumilus ATCC 7061] Length = 436 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 17/196 (8%) Query: 18 VPEIGLLPKAGPPE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 LP E GR NVGKSSL+N ++ + SN G T+ Sbjct: 160 AEHFKNLPDTQYDEQVVQFCLIGRPNVGKSSLVNAMLGEDRV-IVSNIAGTTRDAV---- 214 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N +VD G + + + L R L V +++D G Sbjct: 215 --DTMFTYNQRDFVIVDTAGMRKKGKVYETTEKYSVL--RALKAIDRSDVVAVVLDGEEG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPT 191 + + D+ + + + + IV+ K D + T+++ + IR + + V+ Sbjct: 271 IIEQDKRIAGYAHEAGKAVVIVVNKWDAVEKDER--TMKEFEQNIREHFQFLDYAPVLFM 328 Query: 192 SSVKRKGIEVLRKAIL 207 S++ +K I L +I+ Sbjct: 329 SALTKKRIHTLMPSII 344 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 21/182 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS++ N + + ++ + PG T+ + ++ N NL Sbjct: 2 GKPVVAIVGRPNVGKSTIFNRIAGER-ISIVEDTPGVTRDRI-YSSAEWLNYDFNLIDTG 59 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D+ + + + + +++ R GV D++V L + Sbjct: 60 GIDIGDEPFLAQIRHQAEI----------AMDEADVIIFMVNGRDGVTSADEEVAKILYR 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D +P + + Y E P S G+ L A+ Sbjct: 110 TKKPVVLAVNKLD--NPEMRSDVYD-------FYALGFGEPYPISGTHGLGLGDLLDAVA 160 Query: 208 ET 209 E Sbjct: 161 EH 162 >gi|160890563|ref|ZP_02071566.1| hypothetical protein BACUNI_03006 [Bacteroides uniformis ATCC 8492] gi|270295703|ref|ZP_06201903.1| ribosome-associated GTPase EngA [Bacteroides sp. D20] gi|317479893|ref|ZP_07939009.1| ribosome-associated GTPase EngA [Bacteroides sp. 4_1_36] gi|156859562|gb|EDO52993.1| hypothetical protein BACUNI_03006 [Bacteroides uniformis ATCC 8492] gi|270273107|gb|EFA18969.1| ribosome-associated GTPase EngA [Bacteroides sp. D20] gi|316903940|gb|EFV25778.1| ribosome-associated GTPase EngA [Bacteroides sp. 4_1_36] Length = 437 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 16/186 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P A GR N GKSS++N + + G T+ + F Sbjct: 172 DEDIPRFAVVGRPNAGKSSIVNAFIGEDRN-IVTEIAGTTRDSIYTRYNKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + ++R + L++D G++ D ++FS + Sbjct: 225 FYLVDTAGIRKKNKVNEDLEYYS--VIRSIRSIENADVCILMVDATRGIESQDLNIFSLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGI---- 199 K A +V+ K D + T + ++ + IRN +I S++ ++ I Sbjct: 283 QKNAKGLVVVVNKWDLVKDKTV-KVMKTFEDAIRNRFAPFVDFPIIFASALTKQRILKVL 341 Query: 200 EVLRKA 205 E R Sbjct: 342 EEARDV 347 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 58/176 (32%), Gaps = 20/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A + G T+ + + ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-KTRQAIVNEEAGTTRDRQY------GKTEWLGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ + + L + ++D +GV +D+ V + L + Sbjct: 58 GGWVVNSDDIFEEEIRKQV----LMAVDEADVILFVVDVMNGVTDLDEQVAAILRRAKKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D E Y + S+V G + I+ Sbjct: 114 VLLVANKTD---------NHELQYNAPEFYSLGLGDPYCISAVTGSGTGDMMDLIV 160 >gi|258404637|ref|YP_003197379.1| GTP-binding protein EngA [Desulfohalobium retbaense DSM 5692] gi|257796864|gb|ACV67801.1| ribosome-associated GTPase EngA [Desulfohalobium retbaense DSM 5692] Length = 441 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 18/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSLIN LV K L S G T + + +D Sbjct: 184 LALLGRPNVGKSSLINALVGEKRLV-VSPEAGTTTDIV------DVLFEKKGKRYIFLDS 236 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G +++ + L R L + L +D GV D+ + SFLD++ + Sbjct: 237 AGVRRRSKIDDSLERFSVL--RALRNSKRAQVTVLCLDALQGVVGQDKKLLSFLDREKIP 294 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-------EVLRK 204 + + + K+D + + + + +R +H I TS+V + G+ E L Sbjct: 295 FIVAVNKVDLVPSDRLGQLKKYFENELR--FLSHVPRIYTSAVSKAGLGGLLPLTEKLWS 352 Query: 205 A 205 Sbjct: 353 E 353 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L+ RK A T + PG T+ + + + + P AL Sbjct: 2 LPTVALIGRRNVGKSTLFNRLI-RKQKALTHDRPGVTRDRLY------AEVPHGEPPFAL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + D + + + ++D R GV ID+ + +FL + Sbjct: 55 VDTGGLVLDESDGVEADVFEQARE----AMEGAQLILFVVDGRQGVSTIDEQLAAFLRQT 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++V+ K+D ++TL + + S+ G L++ I E Sbjct: 111 DKPVRLVINKVD---GAELEDTLSA------EFYALGFPLSAVSAAHGYGTLTLQEEIEE 161 Query: 209 TI 210 T+ Sbjct: 162 TL 163 >gi|218516154|ref|ZP_03512994.1| GTP-binding protein EngA [Rhizobium etli 8C-3] Length = 284 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ + + ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGDARLMGLTFTIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A G + + + ++D ++G+ +D + L ++ Sbjct: 58 AGLEEADEES----LQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E Y E P S+ +G+ LR AI+E I Sbjct: 114 VVLVANKS---------EARGSDSGFYDAYTLGLGEPTPISAEHGQGMLDLRDAIVEAIG 164 Score = 55.2 bits (132), Expect = 5e-06, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 7/81 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A GR N GKS+LIN + L T G T+ V D+ Sbjct: 199 DTKPLRVAIVGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSIS-VEWDWRG-----RT 251 Query: 86 MALVDMPGYGYARAPKKNVDS 106 + + D G + ++ Sbjct: 252 IKMFDTAGMRRKARVTEKLEK 272 >gi|167040606|ref|YP_001663591.1| GTP-binding protein EngA [Thermoanaerobacter sp. X514] gi|300914647|ref|ZP_07131963.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X561] gi|307724119|ref|YP_003903870.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X513] gi|238687595|sp|B0K3E4|DER_THEPX RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166854846|gb|ABY93255.1| small GTP-binding protein [Thermoanaerobacter sp. X514] gi|300889582|gb|EFK84728.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X561] gi|307581180|gb|ADN54579.1| ribosome-associated GTPase EngA [Thermoanaerobacter sp. X513] Length = 439 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 19/196 (9%) Query: 21 IGLLPKAGP------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + LP+ +IA G+ NVGKSSL+N ++ + + SN PG T+ Sbjct: 162 VKRLPQEELEYTEETIKIAVIGKPNVGKSSLVNKILGEERV-IVSNIPGTTRDAI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + + L+D G ++++ + L ERS + L+ID G Sbjct: 216 -DTPFSKDGKNYVLIDTAGIRRKSRISESIERYSVLRALAAIERSDI--CLLMIDATEGP 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + + + IV+ K D + T E + + + + ++ S Sbjct: 273 TEQDTKIAGYAFENGKGIIIVVNKWDAIKKDNNTVNEYTKMVREKLS--FISFAPILFIS 330 Query: 193 SVKRKGIEVLRKAILE 208 + + + + + + + Sbjct: 331 AKTGQRVHRVLETVDK 346 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 25/182 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L N ++ K ++ + PG T+ + N + LVD Sbjct: 6 VSIVGRPNVGKSTLFNKIMG-KRISIVEDKPGVTRDRIY------GNAEWLDKKFILVDT 58 Query: 92 PGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 G K I + L+D + G+ D+++ + L + Sbjct: 59 GGLDPNAEDILFSKVRLQVEAAIDTS-------DVILFLVDAKEGLMPEDEEIANILRRA 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V K+D E + IP S+ GI L +++ Sbjct: 112 KKEVILVCNKVDSFK--------EMPPTYYDFFSLGLGNPIPISASNGLGIGELLDEVVK 163 Query: 209 TI 210 + Sbjct: 164 RL 165 >gi|262278197|ref|ZP_06055982.1| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase [Acinetobacter calcoaceticus RUH2202] gi|262258548|gb|EEY77281.1| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase [Acinetobacter calcoaceticus RUH2202] Length = 342 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID + D V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDA-YKWTPNDDLVLEKLKNAEM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 149 PVILVINKADTFEDKRDILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 204 Query: 211 NY 212 Y Sbjct: 205 PY 206 >gi|317122971|ref|YP_004102974.1| GTP-binding protein Era [Thermaerobacter marianensis DSM 12885] gi|315592951|gb|ADU52247.1| GTP-binding protein Era [Thermaerobacter marianensis DSM 12885] Length = 391 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 70/188 (37%), Gaps = 24/188 (12%) Query: 27 AGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 AG PE +A GR NVGKS+L+N L+ RK +A S+ P T+ V Sbjct: 92 AGQPEGFRSGFVALIGRPNVGKSTLLNQLIGRK-IAIMSDKPQTTRTRILGVLN------ 144 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC-RHGVKQIDQ 139 + VD PG K ++ + V L++ D+ Sbjct: 145 RPGAQLIFVDTPGIH-----KPQHLLGEHMVRVARRTLQEVEVVCWLVEAPDREPGPGDR 199 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + L + +V+ KID+++P ++ L V P S++ G+ Sbjct: 200 YIAEQLVEVKTPKILVVNKIDQVAPGEVPAIAQRFAQL-----GQFAAVHPVSALHGVGV 254 Query: 200 EVLRKAIL 207 L + + Sbjct: 255 PELVEELE 262 >gi|161485612|ref|YP_386558.2| GTP-binding protein EngA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 455 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 70/188 (37%), Gaps = 14/188 (7%) Query: 19 PEIGLLPKAG---PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 PE P+ P ++A GR N GKSSL+N L + + S+ G T+ Sbjct: 175 PEDEDAPQEEEERPLKLAMLGRPNAGKSSLVNALSGSRRM-IVSDVAGTTRDSVDIAV-- 231 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 + VD G + V+ + + L + +++D G+ Sbjct: 232 ----ELGGRRYVFVDTAGVRRRAKIQDPVERYS--VNSSLKSTTKADVTLVVLDAVEGLT 285 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 Q D+ + LD++ + +V+ KID + + H ++ S+ Sbjct: 286 QQDKRLIDLLDERKTPFMLVINKIDLVPRDGLTALKRLYDDAL--TFCKHVPIMYISARS 343 Query: 196 RKGIEVLR 203 +G++ L Sbjct: 344 GRGVDKLL 351 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 22/188 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P+IA GR NVGKS+L N L+ R N A T + PG T+ + +K + Sbjct: 2 LPKIALIGRPNVGKSTLFNRLI-RSNRAITHDRPGVTRD------RMEGYVKVGDRKFII 54 Query: 89 VDMPGYGY------ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 +D G A P + ++ + + + L++D R G+ D+ + Sbjct: 55 IDTGGITLDEHAAVAEGPDELRGFEAEILRQTEEAIADSVALCLVVDGREGLTPFDESLA 114 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +++ K + + K+D E + + T VIP S + Sbjct: 115 AYVRKSGKPVLLAVNKVD---------GEEMADLYMAEFHTLGFPVIPLSGAHGFNVRAF 165 Query: 203 RKAILETI 210 + + + Sbjct: 166 SGELFDLL 173 >gi|319779671|ref|YP_004130584.1| GTP-binding protein EngA [Taylorella equigenitalis MCE9] gi|317109695|gb|ADU92441.1| GTP-binding protein EngA [Taylorella equigenitalis MCE9] Length = 452 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 82/192 (42%), Gaps = 11/192 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 L P+ ++A GR NVGKS+LIN L+ + + + PG T+ Sbjct: 172 LNSEPDADQEFTDHKIKLAIVGRPNVGKSTLINSLIGEQRV-IAFDLPGTTRDAIEI--- 227 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + ++N L+D G ++++ + +++ L V L++D + + Sbjct: 228 ---DFEHNNKKYKLIDTAGLRKRGRVFESIEKFS--VIKTLQAIEACNVVVLVLDAQSEI 282 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D + F+ + + + + K D L + + + +R + +V S++ Sbjct: 283 SEQDAHIAGFILESGRALVVAINKWDGLDEDKRDWVIREFERKLR--FLSFAKVHFISAL 340 Query: 195 KRKGIEVLRKAI 206 K +GI+ L K++ Sbjct: 341 KSQGIKSLLKSV 352 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 20/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L +N A ++ G T+ + + + ++ Sbjct: 5 PVIALVGRPNVGKSTLFNRLTRSRN-AIVADYSGLTRD------RHYGEGRIGDRPFLVI 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + +SE V L+D R G+ D D+ + L K Sbjct: 58 DTGGFEP-KVKTGILKEMARQTELAISES---DVVIFLVDARSGINAQDHDIATKLRKVG 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 V + + K + L P A + E + SS G+ L L Sbjct: 114 VPVLLAVNKAEGLQPNQANA---------EFHELGLGEPLAISSAHGDGVANLIDIALSK 164 Query: 210 I 210 I Sbjct: 165 I 165 >gi|172060768|ref|YP_001808420.1| GTP-binding protein EngA [Burkholderia ambifaria MC40-6] gi|238689149|sp|B1YR40|DER_BURA4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|171993285|gb|ACB64204.1| small GTP-binding protein [Burkholderia ambifaria MC40-6] Length = 445 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGIKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L S V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D L ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHQMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVATDFYELGLGDPRAISAAHGDGV 152 >gi|134295839|ref|YP_001119574.1| GTP-binding protein EngA [Burkholderia vietnamiensis G4] gi|166224317|sp|A4JEN6|DER_BURVG RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|134138996|gb|ABO54739.1| small GTP-binding protein [Burkholderia vietnamiensis G4] Length = 445 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGIKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L S V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D L ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGLDDHARDRAKADLTRKLKFLDFAKSHYI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVATDFYELGLGDPRAISAAHGDGV 152 >gi|83767467|dbj|BAE57606.1| unnamed protein product [Aspergillus oryzae] Length = 177 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 10/114 (8%) Query: 8 TKSAWIFLRGVPEIGLLPKAGP-PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQ 66 ++ + I + + P + PE+AF GRSNVGKSSL+N ++ K + TS+ PGRT+ Sbjct: 73 SRHSPIKIWSASKFRTTPMSSVEPEVAFLGRSNVGKSSLLNAIMG-KEICWTSSKPGRTR 131 Query: 67 HLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 +N F K + L+DMPGYG A + WG I++YL R Sbjct: 132 EMNAFGIG---GTKGGESKIVLLDMPGYGKASRTE-----WGIEIMKYLQGRKQ 177 >gi|284166816|ref|YP_003405095.1| small GTP-binding protein [Haloterrigena turkmenica DSM 5511] gi|284016471|gb|ADB62422.1| small GTP-binding protein [Haloterrigena turkmenica DSM 5511] Length = 205 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 48/197 (24%), Positives = 79/197 (40%), Gaps = 29/197 (14%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 E+ GRSNVGKS+L+ + K T PG T+ N + Sbjct: 6 PDREAEVVLVGRSNVGKSTLMREITGHK--FDTGGKPGVTRQPNHY--------DWAAED 55 Query: 86 MALVDMPGYGYARAPKKN-VDSWGGLIVRYLSERST--LRCVYL-----LIDC--RH-GV 134 + D+PG+G+ + + IV+Y+ E + L V + +ID RH G Sbjct: 56 FVVTDLPGFGFMSGVDEEYREEIKTDIVQYVEEYADNILVGVLVVDGKSVIDIIDRHSGP 115 Query: 135 KQI--DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVI 189 +I D ++F FL V + + K+DK+ E L + YP + Sbjct: 116 DEIPYDVEMFHFLRDVDVPTVVAVNKMDKVD--DRDERLNDLCDRLGLYPPWKQWQETIA 173 Query: 190 PTSSVKRKGIEVLRKAI 206 P ++ + I L +A+ Sbjct: 174 PITAKNGQ-ISSLNEAV 189 >gi|262166501|ref|ZP_06034238.1| GTP-binding protein Era [Vibrio mimicus VM223] gi|262026217|gb|EEY44885.1| GTP-binding protein Era [Vibrio mimicus VM223] Length = 324 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 23/204 (11%) Query: 8 TKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH 67 ++S + PE G +A GR NVGKS+L+N L+ +K ++ TS P T+H Sbjct: 14 SRSEGQTVTSTPEDQHC---GF--VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRH 67 Query: 68 LNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYL 126 V D VD PG + + L+ R S S + V Sbjct: 68 RIMGVETD------GNYQAIYVDTPGLHI-----EEKRAINRLMNRAASSSLSDVNLVLF 116 Query: 127 LIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP 186 +++ H D+ VF+ L K + + K+D++ E + L + Sbjct: 117 VVEGTH-WTADDEMVFNKLQKANFPVVLCVNKVDQVK--DRNEVMLHMLELSKR--MQFV 171 Query: 187 EVIPTSSVKRKGIEVLRKAILETI 210 +++P S+ + K +VL+K + + + Sbjct: 172 DIVPISAKQGKNTDVLKKHVRDHL 195 >gi|255525312|ref|ZP_05392252.1| GTP-binding protein Era [Clostridium carboxidivorans P7] gi|296188181|ref|ZP_06856573.1| GTP-binding protein Era [Clostridium carboxidivorans P7] gi|255510984|gb|EET87284.1| GTP-binding protein Era [Clostridium carboxidivorans P7] gi|296047307|gb|EFG86749.1| GTP-binding protein Era [Clostridium carboxidivorans P7] Length = 293 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 17/180 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L+N ++ K L+ S P T++ + + + VD Sbjct: 7 ITIIGRPNVGKSTLLNSIMGEK-LSIVSCKPQTTRNNIQTILTEKD------FQLVFVDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + I + + + L + + + D + L + V Sbjct: 60 PGI---HKPKHKLGEFMVKIAQ--DSIKEVDLILFLTNPEDEIGKGDMYILEQLKECNVP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +VL KID+ + +TL+ + + E+IP S++K K ++ L++ +++ ++ Sbjct: 115 VFLVLNKIDENTQERVAKTLDNYSKVF-----SFAEIIPISALKGKNVDELKELMVKYMH 169 >gi|108763403|ref|YP_631947.1| GTP-binding protein Era [Myxococcus xanthus DK 1622] gi|108467283|gb|ABF92468.1| GTP-binding protein Era [Myxococcus xanthus DK 1622] Length = 314 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 21/179 (11%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR NVGKS+L+N L K +A S P T++ V +A +D P Sbjct: 13 ALIGRPNVGKSTLLNALTGEK-IAIVSPKPQTTRNRILGVVT------RPEGQVAFIDTP 65 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLID--CRHGV--KQIDQDVFSFLDKK 148 G A+ + ++ L + V LI+ ++ + L K Sbjct: 66 GIHQAKG-----ELNRYMVEVALQAAEEVDLVLFLIEPPASEKPEVSPGNRAILDRLQKI 120 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ KID + + ++ + +P EV+P S+ ++ G+E L +L Sbjct: 121 GKPTFLVINKIDSVPKSQLLPLIDLYRQ---EFP--FAEVVPISAREKDGVERLFHTVL 174 >gi|196229979|ref|ZP_03128843.1| small GTP-binding protein [Chthoniobacter flavus Ellin428] gi|196226305|gb|EDY20811.1| small GTP-binding protein [Chthoniobacter flavus Ellin428] Length = 462 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 70/185 (37%), Gaps = 12/185 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 A P +IA GR NVGKSSL N ++N S G T+ + Sbjct: 145 PASPIKIAIVGRPNVGKSSLTNAILNDDRT-LVSPISGTTRDAIDIPYERHGQH------ 197 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G +V+ + + R+ + C L+ID GV D+ + + Sbjct: 198 YVLIDTAGIRPRGKVDNSVEVFSVMRSETSIRRADICC--LVIDAEQGVTAQDKRIAGMI 255 Query: 146 DKKAVSYQIVLTKIDKLS-PTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVL 202 ++ + K D + T ++E L++ +R + + + S+ + L Sbjct: 256 QEENKPCIVAFNKWDLIKDRTDSKEELKEVLDGLREELFFIPYAPSMLVSAKTGAELTRL 315 Query: 203 RKAIL 207 K I Sbjct: 316 FKTIE 320 Score = 54.8 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 19/150 (12%) Query: 61 APGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST 120 PG T+ S K ++D G G A + + L + Sbjct: 1 MPGVTRDRI------TSQCKLGNYPFEIIDTGGIG-ANVDASFTEQVRAEVEIALG---S 50 Query: 121 LRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN 180 + ++D + G+ +DQ++ + + A + + KID + Sbjct: 51 ADVLLFVVDGQDGLTPLDQELARLMRRTAKPLLLAINKIDVDQHGPRAAEFSQL------ 104 Query: 181 YPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 E I S+ +GI L + + Sbjct: 105 ---GFSESIAISAEHNRGILPLVAWLERML 131 >gi|157692783|ref|YP_001487245.1| GTP-binding protein EngA [Bacillus pumilus SAFR-032] gi|166920097|sp|A8FEL8|DER_BACP2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157681541|gb|ABV62685.1| GTPase [Bacillus pumilus SAFR-032] Length = 436 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 17/196 (8%) Query: 18 VPEIGLLPKAGPPE----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 LP E GR NVGKSSL+N ++ + SN G T+ Sbjct: 160 AEHFKNLPDTQYDEQVVQFCLIGRPNVGKSSLVNAMLGEDRV-IVSNIAGTTRDAV---- 214 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + N +VD G + + + L R L V +++D G Sbjct: 215 --DTMFAYNQRDFVIVDTAGMRKKGKVYETTEKYSVL--RALKAIDRSDVVAVVLDGEEG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPT 191 + + D+ + + + + IV+ K D + T+++ + IR + + V+ Sbjct: 271 IIEQDKRIAGYAHEAGKAVVIVVNKWDAVEKDER--TMKEFEQNIREHFQFLDYAPVLFM 328 Query: 192 SSVKRKGIEVLRKAIL 207 S++ +K I L +I+ Sbjct: 329 SALTKKRIHTLMPSII 344 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 21/182 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS++ N + + ++ + PG T+ + ++ N NL Sbjct: 2 GKPVVAIVGRPNVGKSTIFNRIAGER-ISIVEDTPGVTRDRI-YSSAEWLNYDFNLIDTG 59 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D+ + + + + +++ R GV D++V L + Sbjct: 60 GIDIGDEPFLAQIRHQAEI----------AMDEADVIIFMVNGRDGVTSADEEVAKILYR 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D +P + + Y E P S G+ L A+ Sbjct: 110 TKKPVVLAVNKLD--NPEMRSDVYD-------FYALGFGEPYPISGTHGLGLGDLLDAVA 160 Query: 208 ET 209 E Sbjct: 161 EH 162 >gi|182679273|ref|YP_001833419.1| GTP-binding protein EngA [Beijerinckia indica subsp. indica ATCC 9039] gi|182635156|gb|ACB95930.1| small GTP-binding protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 470 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 64/177 (36%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N LV +K LA + PG T+ + K ++D Sbjct: 4 IAIIGRPNVGKSTLFNRLVGKK-LALVDDRPGVTRDRR------EGDAKLGDLTFKIIDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G G + + + ++ L D R G+ D+ + + Sbjct: 57 AGLEEGHEET----LSGRMRAQTEAAIEQADGIFFLFDARVGLTPEDRFFAQLVRRAGKP 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ K E T I + + +P S+ +G+ L +A+ E Sbjct: 113 LVLIANKA---------EGRVGTAGAIEGFDLGLGDPVPLSAEHGEGLADLYEALRE 160 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 71/191 (37%), Gaps = 13/191 (6%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 L P IA GR N GKS+L+N L+ + L T G T+ +L+ Sbjct: 188 SELDLTKPLRIAVVGRPNAGKSTLLNRLLGEERL-LTGPEAGLTRDSI------GLDLEW 240 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 M + D G + ++ L V +L+D ++ D + Sbjct: 241 RGRKMKIFDTAGLRRRAKIEDKLEKLAA--ADALRAVRFAEVVVVLLDATIPFEKQDLTI 298 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT---KYLIRNYPTAHP-EVIPTSSVKRK 197 ++++ + I L K D + A+ T + R P V+P S+ + Sbjct: 299 ADLVEREGRALVIALNKWDLIGADDAERAARLTLLREEAGRLLPQVKGTPVVPVSATTAE 358 Query: 198 GIEVLRKAILE 208 G++ L AI + Sbjct: 359 GLDRLMAAIDK 369 >gi|138896062|ref|YP_001126515.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2] gi|134267575|gb|ABO67770.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2] Length = 302 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 81/179 (45%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ +N ++ +K +A S+ P T++ V D + + +D Sbjct: 11 VAIIGRPNVGKSTFLNRVIGQK-IAIMSDKPQTTRNKIQGVYTD------DEAQIIFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ L+ + + +++ G + + + L++ Sbjct: 64 PGV---HKPKHKLGDF--MMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLNEVNTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID++ P +++ K L E++P S+++ +E L + I + + Sbjct: 119 VFLVINKIDRVHPDELLPIIDRYKDL-----YTFAEIVPISALEGNNVERLLEQIKQRL 172 >gi|294340463|emb|CAZ88844.1| GTPase involved in ribosome synthesis and maintenance [Thiomonas sp. 3As] Length = 465 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 71/183 (38%), Gaps = 11/183 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ +A +GR NVGKS+L+N LV + + + PG T+ + + Sbjct: 195 PREHSLRLAIAGRPNVGKSTLVNALVGEERV-IAFDMPGTTRDAI------EVPFERDGR 247 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G + V+ + +++ L V LL+D GV D + SF Sbjct: 248 KFILIDTAGLRRKGKVFEAVEKFS--VIKTLQAIEQANVVVLLLDATEGVSDQDAHIASF 305 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 + + + K D + + + + + + + S+ G+ L K Sbjct: 306 AVEAGRALVLAANKWDAVDTYGRERLMVAIRQRLP--FVSFAKFHSISARTGSGLNGLMK 363 Query: 205 AIL 207 +++ Sbjct: 364 SVV 366 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 20/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P ++ GR NVGKS+L N + ++ A ++ PG T+ + + L+ + +V Sbjct: 3 PIVSLVGRPNVGKSTLFNRMTRSRD-AIVADMPGLTRD------RHYGMLRMADRPVIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ V + ++E V L+D R G+ D + + L K Sbjct: 56 DTGGFEPV-VDTGIVHQMARQTRQAIAES---DLVVFLVDLRTGLSPQDLHIAAELRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K E L + E S+ + L IL+ Sbjct: 112 KPILLAVNKA---------EGRHGHPALAEFHELGLGEPFSISAAHGDSVPDLLDRILQA 162 Query: 210 I 210 + Sbjct: 163 L 163 >gi|196248955|ref|ZP_03147655.1| GTP-binding protein Era [Geobacillus sp. G11MC16] gi|196211831|gb|EDY06590.1| GTP-binding protein Era [Geobacillus sp. G11MC16] Length = 302 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 83/179 (46%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ +N ++ +K +A S+ P T++ V D + + +D Sbjct: 11 VAIIGRPNVGKSTFLNRVIGQK-IAIMSDKPQTTRNKIQGVYTD------DEAQIIFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ L+ + + +++ G + + + L++ Sbjct: 64 PGV---HKPKHKLGDF--MMKVALNALREVDLILFMVNAEEGFGRGEAFIIERLNEVNTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID++ P +++ K L YP E++P S+++ +E L + I + + Sbjct: 119 VFLVINKIDRVHPDELLPIIDRYKDL---YP--FAEIVPISALEGNNVERLLEQIKQRL 172 >gi|126695749|ref|YP_001090635.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9301] gi|166225836|sp|A3PBA9|DER_PROM0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|126542792|gb|ABO17034.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str. MIT 9301] Length = 457 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 19/199 (9%) Query: 21 IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 IG LP+ + ++ GR NVGKSSL+N + K A S+ G T + K Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKR-AIVSDISGTTTDSIDTLIK 220 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 N ++D G + K + +G I R L+ID GV Sbjct: 221 KGDNH------WKIIDTAGIRRKKNVKYGTEFFG--INRAFKSIDRSDVCVLVIDAIDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTS 192 DQ + ++++ + IV+ K D + T+ + + +R+ Y ++I S Sbjct: 273 TDQDQKLAGRIEEQGRACIIVVNKWDLVEKN--SSTIYQVEKELRSKLYFLHWSKMIFIS 330 Query: 193 SVKRKGIEVLRKAILETIN 211 ++ + ++ + + L +N Sbjct: 331 ALTGQRVDNIFEHALNAVN 349 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L+N L + N A + PG T+ + + N + Sbjct: 3 LPTIAIIGRPNVGKSTLVNRLC-QSNDAIVFDKPGVTRD------RTYQNASWGGKEFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + L++D GV D + +L Sbjct: 56 VDTGGLVFDDDSEFLPEIRTQV----FLALEEASLALLVVDGNQGVTDGDLSIAKWLRNS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K + T + E P S++ G L ++ Sbjct: 112 SCKTIVAVNKC--------ESTTLGISLASEFWKLGLGEPNPVSAIHGSGTGDLLDLVI 162 >gi|88797949|ref|ZP_01113536.1| GTP-binding protein Era [Reinekea sp. MED297] gi|88779146|gb|EAR10334.1| GTP-binding protein Era [Reinekea sp. MED297] Length = 302 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 16/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H + + + M VD Sbjct: 14 VAIVGRPNVGKSTLMNHLLGQK-ISITSRKPQTTRHQILGIWTE------DKTQMVFVDT 66 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + + + + + V ++D R D V L + Sbjct: 67 PGMHRG----QEKAINRAMNKAADTALTDIDAVIFVVD-RTVFTDEDAWVLEKLKRSRAP 121 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+D+L Q L + + + A EVIP S+++ ++ L +++ Sbjct: 122 VILVINKVDQLD--DKQSLLPHIEAMSEKF--AFKEVIPVSALQGHNLDRLTESL 172 >gi|227543422|ref|ZP_03973471.1| GTP-binding protein EngA [Lactobacillus reuteri CF48-3A] gi|300910088|ref|ZP_07127548.1| ribosome-associated GTPase EngA [Lactobacillus reuteri SD2112] gi|227186601|gb|EEI66672.1| GTP-binding protein EngA [Lactobacillus reuteri CF48-3A] gi|300892736|gb|EFK86096.1| ribosome-associated GTPase EngA [Lactobacillus reuteri SD2112] Length = 440 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 78/196 (39%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ P+ + +F GR NVGKSSL+N ++ + SN G T+ + Sbjct: 163 IKEFPDNAANDEDDSIHFSFIGRPNVGKSSLVNAILGENRV-IVSNVAGTTRDAINTQFE 221 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 K +VD G +N + + ++R + V ++++ G+ Sbjct: 222 TADGQK-----FTMVDTAGIRKKGKIYENTERYS--LMRSMRAIDDSDVVLVVLNAEEGI 274 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTS 192 +++D+ + + + IV+ K D L T+ LIR ++ +I S Sbjct: 275 RELDKHIAGYAHEAGCGVIIVVNKWDTLKEKD-HRTMTDFTNLIRQEFQYLSYAPIIFVS 333 Query: 193 SVKRKGIEVLRKAILE 208 + ++ + L I E Sbjct: 334 AKTKQRLNQLPGLIEE 349 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 64/181 (35%), Gaps = 25/181 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + + ++ + PG T+ + + +++ Sbjct: 7 PIVAVVGRPNVGKSTLFNRIAGER-ISIVEDTPGVTRDRIYAHAEWLGKH------FSMI 59 Query: 90 DMPGYGYARAP--KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D G + P + I + + D +GV D+ V L + Sbjct: 60 DTGGIEISDQPLLTQIRQQAEVAIDE-------ADVIIFVADVENGVTDADEQVARILYR 112 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D E+ + Y E SSV G+ L A++ Sbjct: 113 SNKPVVLAVNKVD---------NPERRSDIYDYYSLGLGEPYAVSSVHGIGMGDLLDAVI 163 Query: 208 E 208 + Sbjct: 164 K 164 >gi|186476174|ref|YP_001857644.1| GTP-binding protein EngA [Burkholderia phymatum STM815] gi|238691310|sp|B2JIU7|DER_BURP8 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|184192633|gb|ACC70598.1| small GTP-binding protein [Burkholderia phymatum STM815] Length = 446 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 76/182 (41%), Gaps = 11/182 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 +IA GR NVGKS+L+N L+ + + PG T+ + + + Sbjct: 179 HGIKIAIVGRPNVGKSTLVNTLIGEDRV-IAFDMPGTTRDSIY------VDFERQGKKYT 231 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G + ++ + +V+ L S V LL+D R + + D + F+ + Sbjct: 232 LIDTAGLRKRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVE 289 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + + K D L P + T + ++ + S+ ++ GI L +++ Sbjct: 290 QGRALVVGVNKWDGLDPHVRERTKSDLQRKLK--FLEFAKFHFISAAEKTGIGPLMRSVD 347 Query: 208 ET 209 + Sbjct: 348 DA 349 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 68/185 (36%), Gaps = 28/185 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ ++ + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRDRHYGEGR-----VGGERPYLVV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL---RCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ G L R + + ++D R+G+ D+ + +L Sbjct: 57 DTGGFEPVAKD-------GILFEMARQTRQAVEESDVIVFIVDGRNGLAPQDKSIADYLR 109 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K +V+ K E ++ T Y + S+ G+ + I Sbjct: 110 KTGRPIFLVVNKA---------EGMKYTNVAADFYELGLGDPRAISAAHGDGVTEM---I 157 Query: 207 LETIN 211 E ++ Sbjct: 158 NEALD 162 >gi|94986558|ref|YP_594491.1| GTP-binding protein EngA [Lawsonia intracellularis PHE/MN1-00] gi|166225821|sp|Q1MS56|DER_LAWIP RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|94730807|emb|CAJ54169.1| predicted GTPases [Lawsonia intracellularis PHE/MN1-00] Length = 453 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 67/172 (38%), Gaps = 11/172 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR N GKSS+IN ++ + L SN G T+ N VD Sbjct: 191 KLAIIGRPNAGKSSIINAIIGKNKL-IVSNIAGTTRDSI------DIPFIFNKTQYLFVD 243 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G V+ + + + + +ID G+ D+ + LD + + Sbjct: 244 TAGIRRRTKITDPVERFS--VNASIKSATKANITLYVIDATEGITAQDKRLLDLLDTRKI 301 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +++ K D ++ + K ++ P H ++ S+V G++ + Sbjct: 302 PFILLINKTDLIAKKQKTLLSKSFKEELQFCP--HIPILMVSAVTSSGLDQI 351 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 11/179 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P+IA GR NVGKS+L N L+ RKN A T + PG T+ + + + L Sbjct: 2 LPKIALVGRPNVGKSTLFNRLI-RKNRAITHDRPGVTRDRMEGLVQSIGHPSFILIDTGG 60 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 V + + + + I + + + + L+++ R G+ D+ + FL K Sbjct: 61 VILDSHYSTINIIDELHGFEKDIFQQVQLAIEESQAICLIVNARDGLLPFDEHLALFLRK 120 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D +EK ++ + +I S+ I L + Sbjct: 121 TGKPILLAVNKVD---------GIEKEDQIVAEFHILGLPMIAVSAEHGHNIRQLENEL 170 >gi|320534114|ref|ZP_08034655.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 171 str. F0337] gi|320133693|gb|EFW26100.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 171 str. F0337] Length = 734 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 21/185 (11%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G P +A GR NVGKS+L+N ++ R+ A + PG T+ + + Sbjct: 294 EPGLPVLAVVGRPNVGKSTLVNRVLGRRE-AVVQDTPGVTRDRVSY------PAEWAGRR 346 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G+ A + I V L++D + G+ + D V L Sbjct: 347 FTIVDTGGWEVDVAGLDAAVATQAEI-----AVEMADAVLLVVDAQVGITETDARVVRML 401 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D + AQE + E P S++ +G + A Sbjct: 402 RRSGKPVVLAANKVD----SPAQE-----GDAAALWNLGLGEPFPVSALHGRGSGEVLDA 452 Query: 206 ILETI 210 ++E + Sbjct: 453 VMEIL 457 Score = 97.9 bits (243), Expect = 9e-19, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 9/155 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR NVGKSSL+N + R+ + + G T+ ++ + Sbjct: 468 PEGDLHRIALVGRPNVGKSSLLNSIAGRERVV-VNETAGTTRDPV------DEIIELDGR 520 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G + D + L + +L+D + + D V Sbjct: 521 QWVFVDTAGIRRRVKQSRGADYYAVLRTQ--GAIDNAEVAVVLLDASEPISEQDVRVVQQ 578 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + +V K D + + L + ++ + Sbjct: 579 AVDAGRALVLVNNKWDLVDEERQKMLLWEVEHDLA 613 >gi|94971659|ref|YP_593707.1| GTP-binding protein EngA [Candidatus Koribacter versatilis Ellin345] gi|94553709|gb|ABF43633.1| Small GTP-binding protein [Candidatus Koribacter versatilis Ellin345] Length = 511 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 22/187 (11%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP G IA GR NVGKS+L N LV ++ A + PG T+ + +++ + Sbjct: 11 LPLVGM--IAIVGRPNVGKSTLFNRLVGQRR-AIVGDEPGITRDR-LYGYSEWAGKR--- 63 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + +VD G P + + + +++D R + D D+ Sbjct: 64 --LRVVDTGGI----VPDDEALIPAEIFRQAKVALEEADVIVMVVDARTELASPDIDLAR 117 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + + + KID + +E + L ++P S+ G+ L Sbjct: 118 LLQRTGKPLILAVNKID---DPKLESYVEDFRRL------GIRTMVPISAEHSTGVAELL 168 Query: 204 KAILETI 210 + ILE I Sbjct: 169 EEILERI 175 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 69/192 (35%), Gaps = 18/192 (9%) Query: 25 PKAGP-PEI--AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P + PEI A GR NVGKS+++N L A S G T+ ++ Sbjct: 232 PDSELTPEIKIAIIGRPNVGKSTMLNRLTGTAR-AIVSPIAGTTRDAV------DEVVER 284 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + +D G + + ++ R +LID GV ID + Sbjct: 285 DGQIFRFIDTAGIRRKGKTRLMAEKLSVVMAR--KHLEAADLALVLIDATEGVTAIDATI 342 Query: 142 FSFLDKKAVSYQIVLTKIDKLS----PTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVK 195 + + S +V+ K D ++ ++ + +R + + ++ S+ Sbjct: 343 AGYAHEAGRSVIVVINKWDLVTINRADGKPAAKVDIFEEQVRRHLKFLNYAPIVFASAET 402 Query: 196 RKGIEVLRKAIL 207 G + +AI Sbjct: 403 GYGSGKIYEAIE 414 >gi|148543995|ref|YP_001271365.1| GTP-binding protein EngA [Lactobacillus reuteri DSM 20016] gi|184153389|ref|YP_001841730.1| GTP-binding protein EngA [Lactobacillus reuteri JCM 1112] gi|194467923|ref|ZP_03073909.1| small GTP-binding protein [Lactobacillus reuteri 100-23] gi|166920101|sp|A5VJK4|DER_LACRD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|229784134|sp|B2G718|DER_LACRJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|148531029|gb|ABQ83028.1| small GTP-binding protein [Lactobacillus reuteri DSM 20016] gi|183224733|dbj|BAG25250.1| GTP-binding protein [Lactobacillus reuteri JCM 1112] gi|194452776|gb|EDX41674.1| small GTP-binding protein [Lactobacillus reuteri 100-23] Length = 437 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 78/196 (39%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ P+ + +F GR NVGKSSL+N ++ + SN G T+ + Sbjct: 160 IKEFPDNAANDEDDSIHFSFIGRPNVGKSSLVNAILGENRV-IVSNVAGTTRDAINTQFE 218 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 K +VD G +N + + ++R + V ++++ G+ Sbjct: 219 TADGQK-----FTMVDTAGIRKKGKIYENTERYS--LMRSMRAIDDSDVVLVVLNAEEGI 271 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTS 192 +++D+ + + + IV+ K D L T+ LIR ++ +I S Sbjct: 272 RELDKHIAGYAHEAGCGVIIVVNKWDTLKEKD-HRTMTDFTNLIRQEFQYLSYAPIIFVS 330 Query: 193 SVKRKGIEVLRKAILE 208 + ++ + L I E Sbjct: 331 AKTKQRLNQLPGLIEE 346 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + + ++ + PG T+ + + +++ Sbjct: 4 PIVAVVGRPNVGKSTLFNRIAGER-ISIVEDTPGVTRDRIYAHAEWLGKH------FSMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + P I + + D +GV D+ V L + Sbjct: 57 DTGGIEISDQPLLTQIRQQAEI-----AIDEADVIIFVADVENGVTDADEQVARILYRSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D E+ + Y E SSV G+ L A+++ Sbjct: 112 KPVVLAVNKVD---------NPERRSDIYDYYSLGLGEPYAVSSVHGIGMGDLLDAVIK 161 >gi|126653372|ref|ZP_01725476.1| GTP-binding protein EngA [Bacillus sp. B14905] gi|126589888|gb|EAZ84019.1| GTP-binding protein EngA [Bacillus sp. B14905] Length = 436 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 70/182 (38%), Gaps = 13/182 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 + + GR NVGKSSL+N + + + S+ G T+ + + Sbjct: 173 DDVIKFSLIGRPNVGKSSLVNAFLGQDRV-IVSDIAGTTRDAI------DTPYAYDDQEY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + + + L R L V ++++ G+++ D+ + + Sbjct: 226 VIIDTAGMRKKGKIYETTEKYSVL--RALRAIERSDVVLVVMNAEEGIQEQDKKIAGYAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLRK 204 + + IV+ K D + +T+ IR + + +I S+ ++ + + Sbjct: 284 EAGKAVVIVVNKWDAIEKDE--KTMNVFTQQIREHFLFLDYAPIIFVSANTKQRVHQILP 341 Query: 205 AI 206 I Sbjct: 342 II 343 Score = 91.4 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 59/176 (33%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + S+ + ++ Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGVTRDRIY------SSAEWLTHDFNII 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P I + + + R GV D+ V L K Sbjct: 57 DTGGIEIGDEPFLEQIRQQAEI-----AIEEADVIIFMTNGREGVTAADEQVAKILYKTK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + KID + + + Y E P S G+ L Sbjct: 112 KPVVLAVNKID---------NPDMREMIYDFYALGFGEPWPISGSHGLGLGDLLDE 158 >gi|91069816|gb|ABE10748.1| GTP-binding protein [uncultured Prochlorococcus marinus clone ASNC1092] Length = 457 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 19/199 (9%) Query: 21 IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 IG LP+ + ++ GR NVGKSSL+N + K A S+ G T + K Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKR-AIVSDISGTTTDSIDTLIK 220 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 N ++D G + K + +G I R L+ID GV Sbjct: 221 KGDNH------WKIIDTAGIRRKKNVKYGTEFFG--INRAFKSIDRSDVCVLVIDAIDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTS 192 DQ + ++++ + IV+ K D + T+ + + +R+ Y ++I S Sbjct: 273 TDQDQKLAGRIEEQGRACIIVVNKWDLVEKN--SSTIYQVEKELRSKLYFLHWSKMIFIS 330 Query: 193 SVKRKGIEVLRKAILETIN 211 ++ + ++ + + L +N Sbjct: 331 ALTGQRVDNIFEHALNAVN 349 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L+N L + N A + PG T+ + + N + Sbjct: 3 LPTIAIIGRPNVGKSTLVNRLC-QSNDAIVFDKPGVTRD------RTYQNASWGGKEFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + L++D GV D + +L Sbjct: 56 VDTGGLVF----DDDSEFLPQIRTQVFLALEEASLALLVVDGNQGVTDGDLSIAKWLRNS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K + T + E P S++ G L ++ Sbjct: 112 SCKTIVAVNKC--------ESTTLGISLASEFWKLGLGEPNPVSAIHGSGTGDLLDLVI 162 >gi|28493018|ref|NP_787179.1| bifunctional cytidylate kinase/GTP-binding protein [Tropheryma whipplei str. Twist] gi|28572231|ref|NP_789011.1| bifunctional cytidylate kinase/GTP-binding protein [Tropheryma whipplei TW08/27] gi|28410362|emb|CAD66748.1| putative GTP-binding protein [Tropheryma whipplei TW08/27] gi|28476058|gb|AAO44148.1| cytidylate kinase/GTP-binding protein fusion [Tropheryma whipplei str. Twist] Length = 686 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 15/182 (8%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 +G P +A GR NVGKSSLIN L N + A + G T+ + + Sbjct: 423 SGAPRVALIGRPNVGKSSLINQLTNSRR-AIVDDLAGTTRDPL------DALAVIGDKSW 475 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G +K D + L + R+ + LL+D H + + D + + Sbjct: 476 LFVDTAGLRRKFKSQKGADFYAYLRATTVLRRTEI--ALLLLDASHAITEQDVRIAEMVV 533 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRK 204 + + I + K D L +E + I N + A + S+ +G++ L Sbjct: 534 ESGRALVIAINKWDLLD----EERRYWLEREIDNTFFRFAWAPRVNISARTGRGVKQLAT 589 Query: 205 AI 206 A+ Sbjct: 590 AL 591 Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 63/178 (35%), Gaps = 21/178 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ R+ A N PG T+ + LVD Sbjct: 257 VVIVGRPNVGKSALVNCILGRRE-AVVENRPGVTRDRVVY------PAFWAGRPFTLVDT 309 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ I ++ + ++D +HG D + L ++ Sbjct: 310 GGWECDAEGLDAEVVAQAEIGMSIA-----DIIIFVVDVQHGPVSTDAVIARNLQRQNKP 364 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K D S + + + + + S+ +G+ L ++++ Sbjct: 365 IFLVANKADNASSDS---------DVAQFWSLGLGQPYACSATHGRGVADLMDIVMQS 413 >gi|87118473|ref|ZP_01074372.1| GTPase EngA [Marinomonas sp. MED121] gi|86166107|gb|EAQ67373.1| GTPase EngA [Marinomonas sp. MED121] Length = 454 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 21/174 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 2 IPVIALVGRPNVGKSTLFNQLTRSRD-ALVADYPGLTRDRKY------GDGRIGEHEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + + L V L+D RHG+ D+ + + L + Sbjct: 55 IDTGGI-----SGDEMGIDEKMARQSLLAIEEADTVLFLVDGRHGLNPADEMIANHLRRS 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ K D ++ A L Y ++ P ++ KG+ L Sbjct: 110 NKPTFMVVNKTDGINEDVA---------LADFYSIGLGDLHPIAASHGKGVHKL 154 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 69/178 (38%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L+N ++ + + PG T+ + N L+D Sbjct: 182 IGVIGRPNVGKSTLVNRMLGEDRVV-VYDMPGTTRDSVYI------PYIRNEKEYTLIDT 234 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + K+ V+ + IV+ L V ++ID + + D + ++ Sbjct: 235 AGVRRRKHIKEAVEKFS--IVKTLKAIQDANVVIVVIDGHEDLVEQDLHMIGYVIDAGRG 292 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I + K D L + + + + + P + +V S++ + L I ET Sbjct: 293 LVIAVNKWDGLDQYSKERIKTEVERRLGFVP--YAKVHYISALHGTAVGNLYDTIDET 348 >gi|315185423|gb|EFU19195.1| GTP-binding protein Era [Spirochaeta thermophila DSM 6578] Length = 290 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 18/177 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR + GKS+L+N L RK +A TS P T++ + + + +D P Sbjct: 7 AIVGRPSSGKSTLLNTLCGRK-VAITSPVPQTTRNRIRGIVTE------ERGQIVFIDTP 59 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 GY L + + + + L+D V + + ++ + + Sbjct: 60 GYH-----HSEKKFNLFLKEQVIEALKEVDEILYLVDSTRSVGEEEHELIELVKQAGKPV 114 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I L KID + E L++ + + P ++ S+ +G+E L+ + E Sbjct: 115 VIALNKID-----IPEHHAEGMVPLLKAHFPSAP-IVKISAYTGEGLEELKARLFEA 165 >gi|330508596|ref|YP_004385024.1| GTP-binding protein [Methanosaeta concilii GP-6] gi|328929404|gb|AEB69206.1| GTP-binding protein [Methanosaeta concilii GP-6] Length = 189 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 76/196 (38%), Gaps = 29/196 (14%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 E+ GRSNVGKS+L L +K PG TQ K + + VD Sbjct: 4 EVVLIGRSNVGKSTLFWELTGKK--VPIGKRPGITQ----------YPFKTKVGNIFYVD 51 Query: 91 MPGYGYA-RAPKKNVDSWGGLIVRYLSE-RSTLRCVYLLIDCR-----------HGVKQI 137 MPGYG+ R K + + LIV Y E + +ID G + Sbjct: 52 MPGYGFMFRTTKADQEKTKDLIVHYFEEHAREILLAVQVIDAASFLDIADRWEGRGEVPM 111 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIPTSSV 194 + +++ FLD + + K+D+++ L+ + P V P S+ Sbjct: 112 EIELWEFLDDLGLDSVLAANKMDRIAKQDRDGALDLICERLGMLPPWTQWQDRVAPISAK 171 Query: 195 KRKGIEVLRKAILETI 210 + + IE LR I + Sbjct: 172 RGQ-IEPLRAVISRKV 186 >gi|146328838|ref|YP_001209431.1| GTP-binding family protein [Dichelobacter nodosus VCS1703A] gi|146232308|gb|ABQ13286.1| GTP-binding family protein [Dichelobacter nodosus VCS1703A] Length = 449 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 68/175 (38%), Gaps = 10/175 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKS+L+N L+ + L S G T+ D N A L+D Sbjct: 185 LAVLGRPNAGKSTLLNRLLGEERLV-ASPVAGTTRDAIRIPYVD-----NEGDAFTLIDT 238 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ + IV+ L V L++D + G+ D + + K+ Sbjct: 239 AGIRRKARVDDKIEKFS--IVKALEAIEQANVVILVLDAQAGITDQDAHLLGEIIKRGRG 296 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 I + K D L T ++ + + + + E+ S++ I L A+ Sbjct: 297 LVIAVNKWDHLDGETREKIQAQLERKLN--FVDYAEIFYISALHGSNIRALLPAV 349 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 20/184 (10%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 +A GR NVGKS+L N L R A SN G T+ + + Sbjct: 3 DHLATVALVGRPNVGKSTLFNTLT-RSRQAIVSNKAGLTRDRIY------ARTTLAGVPC 55 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + + + + + + ++D R G+ D+ + + L Sbjct: 56 MLIDTGG----MLNTETAEIDFRVDEQARTAMEEADVIVFVLDARDGLTLDDEQIAAELR 111 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + KID + P A + Y V+ ++ +R+GI+ L I Sbjct: 112 RVTKPIVLAVNKIDGVDPDVA---------VADFYRLGMQPVLTIAAEQRRGIKQLEDLI 162 Query: 207 LETI 210 + + Sbjct: 163 VSLL 166 >gi|227364908|ref|ZP_03848953.1| GTP-binding protein EngA [Lactobacillus reuteri MM2-3] gi|325682467|ref|ZP_08161984.1| ribosome-associated GTPase EngA [Lactobacillus reuteri MM4-1A] gi|227070055|gb|EEI08433.1| GTP-binding protein EngA [Lactobacillus reuteri MM2-3] gi|324978306|gb|EGC15256.1| ribosome-associated GTPase EngA [Lactobacillus reuteri MM4-1A] Length = 440 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 78/196 (39%), Gaps = 11/196 (5%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ P+ + +F GR NVGKSSL+N ++ + SN G T+ + Sbjct: 163 IKEFPDNAANDEDDSIHFSFIGRPNVGKSSLVNAILGENRV-IVSNVAGTTRDAINTQFE 221 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 K +VD G +N + + ++R + V ++++ G+ Sbjct: 222 TADGQK-----FTMVDTAGIRKKGKIYENTERYS--LMRSMRAIDDSDVVLVVLNAEEGI 274 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTS 192 +++D+ + + + IV+ K D L T+ LIR ++ +I S Sbjct: 275 RELDKHIAGYAHEAGCGVIIVVNKWDTLKEKD-HRTMTDFTNLIRQEFQYLSYAPIIFVS 333 Query: 193 SVKRKGIEVLRKAILE 208 + ++ + L I E Sbjct: 334 AKTKQRLNQLPGLIEE 349 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + + ++ + PG T+ + + +++ Sbjct: 7 PIVAVVGRPNVGKSTLFNRIAGER-ISIVEDTPGVTRDRIYAHAEWLGKH------FSMI 59 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + P I + + D +GV D+ V L + Sbjct: 60 DTGGIEISDQPLLTQIRQQAEI-----AIDEADVIIFVADVENGVTDADEQVARILYRSN 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D E+ + Y E SSV G+ L A+++ Sbjct: 115 KPVVLAVNKVD---------NPERRSDIYDYYSLGLGEPYAVSSVHGIGMGDLLDAVIK 164 >gi|149923268|ref|ZP_01911678.1| GTP-binding protein EngA [Plesiocystis pacifica SIR-1] gi|149815865|gb|EDM75385.1| GTP-binding protein EngA [Plesiocystis pacifica SIR-1] Length = 487 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 64/184 (34%), Gaps = 26/184 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N LV R+ A + PG T+ + V +V Sbjct: 28 PLVAIIGRPNVGKSTLFNRLVGRRE-AIVEDRPGVTRDRLYGVASWEGRH------FLVV 80 Query: 90 DMPGYGYA---RAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G + P + + ++D + G +D D+ + L Sbjct: 81 DTGGVDPSLDTGLPGHIRSQAEVAMEE-------ADLILFVVDAKEGATAVDIDIAAELR 133 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K D S A + + EV S+ +G+ A+ Sbjct: 134 RSGKPVMLAANKADSPSRELAAAAM---------HELGLGEVHAVSAAHGRGVGDFCDAL 184 Query: 207 LETI 210 LE + Sbjct: 185 LERL 188 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 74/187 (39%), Gaps = 14/187 (7%) Query: 17 GVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDF 76 E P IAF GR N GKS+L+N L+ + + S+ PG T+ + Sbjct: 190 AATEAQPTPIPPGTRIAFIGRPNAGKSTLVNTLLEEQRV-IVSDTPGTTRDPVY------ 242 Query: 77 SNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 + + L D G + + ++ + + + + V L+ID GV Sbjct: 243 LPFRYKDRDLVLTDTAGLRRRKQIARAMEKLAAI--KSIRTMERTQVVVLVIDASQGVTD 300 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 DQ + ++ + L K D + A++TL T+ + +P +I SSV Sbjct: 301 QDQRLARMAFERGKGVVVALHKWDLIRRDGKLAKDTLAYTQEALG--FLENPYIIK-SSV 357 Query: 195 KRKGIEV 201 +G + Sbjct: 358 IGEGRDE 364 >gi|77919007|ref|YP_356822.1| GTP-binding protein EngA [Pelobacter carbinolicus DSM 2380] gi|123574290|sp|Q3A4Q5|DER_PELCD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|77545090|gb|ABA88652.1| putative Era-like GTP-binding protein [Pelobacter carbinolicus DSM 2380] Length = 439 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 20/171 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N ++ + A + PG T+ N+ + L+D Sbjct: 4 VAIVGRPNVGKSTLFNRILGTRR-AIVEDYPGVTRDRNYAQVTRYG------TPFVLIDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ A + + + + ++D + G+ D +V L + Sbjct: 57 GGFEPASQNRLLKQ----MREQSELAVEEADVILFVVDAKEGLTPSDDEVAGMLRRSGKP 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 V+ K+D S A Y ++ S+ +G++ L Sbjct: 113 VLYVVNKVDGDSHEAAAS---------EFYALGVDQLYTVSAEHGRGMDDL 154 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 78/179 (43%), Gaps = 13/179 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSLIN ++ + L + G T+ + N + L+D Sbjct: 178 LAVIGRPNVGKSSLINRMIGVERLV-ANPTAGTTRDSI------DTPFVYNKKSYVLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ ++ + +++ L V ++ID GV + D V + ++ + Sbjct: 231 AGIRRKGRVQQKLEKYS--VIQSLKAMERAHVVLVVIDAEEGVTEQDLTVAGYALERGRA 288 Query: 152 YQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K D ++ T ++ EK ++ + P A +I S++ + + + + + Sbjct: 289 VLLVVNKWDLVTKDHGTMKQYTEKVRHAFKFLPFA--PIIFVSALSGQRVSKIMAEVEK 345 >gi|93005486|ref|YP_579923.1| GTP-binding protein EngA [Psychrobacter cryohalolentis K5] gi|122415786|sp|Q1QD14|DER_PSYCK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|92393164|gb|ABE74439.1| Small GTP-binding protein domain [Psychrobacter cryohalolentis K5] Length = 480 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 11/189 (5%) Query: 19 PEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 P + + ++A GR NVGKS+L+N L+ + + PG T+ + Sbjct: 167 PSQENVVEPRGLKLAIIGRPNVGKSTLVNRLLGEDRVV-VFDMPGTTRDSIYI------P 219 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 L+D G + V+ + +++ L ++ID G+ D Sbjct: 220 YTREGKDYVLIDTAGVRRRGKIDEKVEKFS--VIKTLQAIEDSNVTVIVIDAHEGIVDQD 277 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + + + + K D L T Q+ K + R + +V S++ G Sbjct: 278 LHMIGYALDAGRALVVAINKWDGL--TADQKNYIKIEMDRRFNFIPYVKVHQISALHGTG 335 Query: 199 IEVLRKAIL 207 + L +IL Sbjct: 336 VGNLYPSIL 344 Score = 94.5 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 29/182 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + A ++ G T+ + + A +V Sbjct: 5 PVVALIGRPNVGKSTLFNQFT-KSRQALVADLSGLTRDRQY------GDATYEDKAFIVV 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G G D G I Y+SE+S + ++D R G+ D ++ F Sbjct: 58 DTGGIG-------EADDGRGDIDDYMSEQSYTAIHEADIIVFVVDARAGMIGADAEIGKF 110 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L +V K+D + + E Y E P ++ +G+ L + Sbjct: 111 LHTLGKPVYVVANKVDGVHDSAPAE----------FYALGLGEPYPMAASHGRGVGNLLE 160 Query: 205 AI 206 + Sbjct: 161 VL 162 >gi|293609825|ref|ZP_06692127.1| GTP-binding protein,16S rRNA-binding [Acinetobacter sp. SH024] gi|292828277|gb|EFF86640.1| GTP-binding protein,16S rRNA-binding [Acinetobacter sp. SH024] Length = 342 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID + Q D V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDA-YKWTQNDDLVLEKLKNAEM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 149 PVILVINKADTFEDKREILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 204 Query: 211 NY 212 Y Sbjct: 205 PY 206 >gi|257876568|ref|ZP_05656221.1| GTP-binding protein engA [Enterococcus casseliflavus EC20] gi|257810734|gb|EEV39554.1| GTP-binding protein engA [Enterococcus casseliflavus EC20] Length = 436 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 12/185 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + + GR NVGKSSLIN ++ + + S+ G T+ D + Sbjct: 171 DDSIIKFSLIGRPNVGKSSLINAILGEERV-IVSDIEGTTRDAI-----DTHFTSESGQE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + + R + V ++++ G+++ D+ + + Sbjct: 225 FTMIDTAGMRKKGKIYESTEKYSVM--RAMRAIERSDVVLMVLNAEEGIREQDKRIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D L T T+ + IR+ + +I S+V ++ + L Sbjct: 283 HEAGRGIIIVVNKWDTLKKET--NTMRDFEEEIRDEFQYLDYAPIIFVSAVTKQRLNKLP 340 Query: 204 KAILE 208 + I E Sbjct: 341 QLIEE 345 Score = 91.4 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N + + ++ + PG T+ + + +++ Sbjct: 4 PTIAIVGRPNVGKSTIFNRIAGER-ISIVEDTPGVTRDRIYATGEWLG------REFSVI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + P + I + + R GV D+ V L K Sbjct: 57 DTGGIDLSDEPFMDQIKHQAEI-----AIDEADVIVFITSAREGVTDADELVARLLYKSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y + P S GI + Sbjct: 112 KPVILAVNKVD---------NPEMRTDIYEFYGLGLGDPYPISGSHGLGIGDVLDE 158 >gi|182418977|ref|ZP_02950233.1| GTP-binding protein EngA [Clostridium butyricum 5521] gi|237668464|ref|ZP_04528448.1| ribosome-associated GTPase EngA [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377260|gb|EDT74828.1| GTP-binding protein EngA [Clostridium butyricum 5521] gi|237656812|gb|EEP54368.1| ribosome-associated GTPase EngA [Clostridium butyricum E4 str. BoNT E BL5262] Length = 438 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 13/174 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + IA G+ NVGKSSLIN L+ + S G T+ S L+ Sbjct: 173 EDEYIRIAMIGKPNVGKSSLINKLLGEDRV-IVSEVAGTTRDAI------DSELETEEGK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+ ++ + + ERS L+ID + G+ + D+ + + Sbjct: 226 FILIDTAGLRRKSKVKEEIERYSVVRTYAAIERSD--VCILMIDAQEGITEQDEKIIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVKRK 197 + + I++ K D + +TL+ K + + + E + S++ + Sbjct: 284 HEMRKAIMIIVNKWDLVEKDD--KTLDNFKRDLQGKLKFINYAEYLFISALTGQ 335 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K ++ + PG T+ + + + ++ Sbjct: 4 PIVAMVGRPNVGKSTLFNRLAG-KRISIVQDTPGVTRDRVY------AEAEWLTHTFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P++N + + T + ++D + G+ D +V + L K Sbjct: 57 DTGGI----EPERNDIIVQQMRRQANIAIETADVIVFIVDGKEGLTAADHEVATMLRKSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D L Y + I S+ + G+ + ++E Sbjct: 113 KPVVLVVNKVDSLKEED---------NAWEFYNLGIGDPITISASQGLGLGDMLDRVVEN 163 Query: 210 IN 211 + Sbjct: 164 FD 165 >gi|325123051|gb|ADY82574.1| GTP-binding protein Era [Acinetobacter calcoaceticus PHEA-2] Length = 340 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 40 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 92 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID + Q D V L + Sbjct: 93 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDA-YKWTQNDDLVLEKLKNAEM 146 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 147 PVILVINKADTFEDKREILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 202 Query: 211 NY 212 Y Sbjct: 203 PY 204 >gi|163842662|ref|YP_001627066.1| GTP-binding protein EngA [Brucella suis ATCC 23445] gi|189037139|sp|B0CK66|DER_BRUSI RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|163673385|gb|ABY37496.1| small GTP-binding protein domain [Brucella suis ATCC 23445] Length = 483 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV RK LA + PG T+ K + L+D Sbjct: 5 LAIVGRPNVGKSTLFNRLVGRK-LALVDDLPGVTRDRRIHDAKLYDL------KFQLIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + + S V +ID + G+ D + + Sbjct: 58 AGLEEAANDSLEA----RMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + E P S+ +G+ LR AI+E + Sbjct: 114 VVLVANKA---------EARGSEAGMYDAFQLGLGEPCPISAEHGQGMPDLRDAIVELLG 164 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 13/194 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 EI P IA GR N GKS+LIN ++ L T G T+ + Sbjct: 200 AEEIPAYDATKPLRIAIVGRPNAGKSTLINTMLGEDRL-LTGPEAGITRDSI------SA 252 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + + + L D G ++ ++ + L V +++D ++ Sbjct: 253 DWEWHGRKIKLFDTAGMRRKARVQEKLEKLS--VADGLRAIRFAEVVIIVLDATIPFEKQ 310 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + ++ + I K D + + EKT L+ +P S + Sbjct: 311 DLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTARLLPQVRGLRA--VPISGER 368 Query: 196 RKGIEVLRKAILET 209 +GI+ L + +++T Sbjct: 369 GQGIDKLMENVVKT 382 >gi|148241565|ref|YP_001226722.1| GTP-binding protein EngA [Synechococcus sp. RCC307] gi|166225929|sp|A5GR60|DER_SYNR3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|147849875|emb|CAK27369.1| GTP-binding protein engA [Synechococcus sp. RCC307] Length = 452 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 15/188 (7%) Query: 21 IGLLPK------AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + LP P ++A GR NVGKSSL+N + A S G T+ Sbjct: 162 LDFLPPQDEEEAPEPIQMAIVGRPNVGKSSLLNTVCGENR-AIVSPIRGTTRDTI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 ++++ + L+D G R+ + +G I R L+ID GV Sbjct: 216 -DTSIEREGQSWKLLDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDVCVLVIDAEEGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + DQ + ++++ + +V+ K D + + + + + Y ++ S++ Sbjct: 273 TEQDQRLAGRIEEEGRACLVVVNKWDLVEKDSHTMPAMEKELRSKLYFLEWAPMLFISAL 332 Query: 195 KRKGIEVL 202 + +E + Sbjct: 333 TGQRVERI 340 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L ++ A + PG T+ + + + Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLCRSRD-AIVHDEPGVTRD------RTYQEGFWGGRTFRV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + + +++D + G+ D+ + ++L ++ Sbjct: 56 VDTGGLVF----DDDSEFLPEIREQASLAMAEACVALVIVDGQQGLTAADEAIAAWLRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K + + + E P S++ G L +L+ Sbjct: 112 KCPVLLGVNKC--------ESPEQGLAMAAEFWALGLGEPKPISAIHGAGTGDLLDQVLD 163 Query: 209 TI 210 + Sbjct: 164 FL 165 >gi|297544408|ref|YP_003676710.1| GTP-binding protein Era [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842183|gb|ADH60699.1| GTP-binding protein Era [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 302 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N ++ K +A TS P T++ + L + + VD Sbjct: 8 VALIGRTNVGKSTLLNAILQEK-IAITSPKPQTTRNTIRGI------LTTDEYQVIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + +I + + +I+ + D+ + L + Sbjct: 61 PGI---HKPKSKLSEF--MIEVAKRTLKEVDLILYMIEPDTEIGPGDRYIIEHLKEVDTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + +ET++ K A +V+ S+++ K I++L++ I+ + Sbjct: 116 VILVVNKIDLVPEERIEETIKIFKKE-----YAFKDVVAISAIENKNIDLLKEKIVSLL 169 >gi|255021269|ref|ZP_05293318.1| GTP-binding protein EngA [Acidithiobacillus caldus ATCC 51756] gi|254969280|gb|EET26793.1| GTP-binding protein EngA [Acidithiobacillus caldus ATCC 51756] Length = 447 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 11/175 (6%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P IA GR NVGKS+L+N ++ + + +APG T+ + Sbjct: 176 SGPRIAVLGRPNVGKSTLVNAMLGEQRV-IVYDAPGTTRDSIRI------PYERAGRPYV 228 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G + ++ L + L+ V +++D R GV D + + Sbjct: 229 MIDTAGIRRRARVGEGLEKLSVL--KTLAALKEADVVLMVLDARDGVTDQDAHLVGVAAE 286 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 ++L K D L Q + + ++ V S++ G+ L Sbjct: 287 LWRPMILLLNKWDGLDARARQMAKAALERHLG--FLSYAPVYTISALHGSGVGDL 339 Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 20/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N L R A ++ PG T+ ++ V + + ++D Sbjct: 5 IALVGRPNVGKSTLFNRLT-RSREALVADLPGLTRDRHYGVAQ------HGTQRFLVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ P++ + + + V L+D + G+ D+++ + L + + Sbjct: 58 GGF----EPEEREGLVAAMAAQTRQAIAEADAVCFLVDAKEGLSAQDEEIAAELRRSGKT 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K+D E E + + P I S G+E L AI Sbjct: 114 VYLVVNKMD--VRGAVAELPEFHRLGL-----GMPYTIAAS--HGHGVETLLDAIF 160 >gi|75909106|ref|YP_323402.1| GTP-binding protein EngA [Anabaena variabilis ATCC 29413] gi|123609166|sp|Q3M929|DER_ANAVT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|75702831|gb|ABA22507.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC 29413] Length = 453 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 17/196 (8%) Query: 21 IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQH-LNFFVP 73 I LP E IA GR NVGKSSL+N + + S G T+ ++ F+ Sbjct: 162 IKHLPPTTELEENNEIKIAIIGRPNVGKSSLLNAFAGEERV-IVSPISGTTRDAIDTFIE 220 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++ N L+D G ++ + + I R V L+ID G Sbjct: 221 RNGQN-------YRLIDTAGIRKKKSIDYGTEFFS--INRAFKAIRRADVVLLVIDALDG 271 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + DQ + + + + +V+ K D + + + R + T + I S+ Sbjct: 272 VTEQDQKLAGRILDEGKACVVVVNKWDAVEKDSYTIYDYEKNLEARLHFTEWADTIYVSA 331 Query: 194 VKRKGIEVLRKAILET 209 V + +E + + + + Sbjct: 332 VTGQRVEKILELVTKA 347 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 19/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L+N L + A + PG T+ + + + Sbjct: 2 GLPIVAIIGRPNVGKSTLVNRLAGEQT-AIVHDEPGVTRD------RTYLPAYWSDREFQ 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G + + L+ +++ + G D+++ +L + Sbjct: 55 VVDTGGLVFNDDTEFLPLIRQQA----LAALHEASAAIFVVNGQTGPNSADEEIAEWLRQ 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + V + + K + + Q + + E P S++ G L ++ Sbjct: 111 QPVPVFLAVNKCESPDQGSIQAS--------EFWELGLGEPYPISAIHGNGTGELLDELI 162 Query: 208 ETI 210 + + Sbjct: 163 KHL 165 >gi|15807299|ref|NP_296029.1| GTP-binding protein EngA [Deinococcus radiodurans R1] gi|26006746|sp|Q9RS19|DER_DEIRA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|6460115|gb|AAF11852.1|AE002062_5 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 438 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 24/181 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL N L+ R+ A ++ PG T+ + + + + L+D Sbjct: 3 KVAIVGRPNVGKSSLFNRLIGRRE-AVVADFPGVTRDAKEGL------MLYHNHRITLID 55 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 G D W I + V ++D R G+ D +V +L + Sbjct: 56 TGGLWSG-------DEWEQAIREKAEWAMEGAQAVIFVLDPREGLSAADYEVADWLRRLG 108 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + KID + E YL + + + S+ +G++ L +++ Sbjct: 109 KPVIVTANKID----SQKHEP-----YLAELWGLGFGDPVAISAEHARGLDDLMDRVMKY 159 Query: 210 I 210 + Sbjct: 160 L 160 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 75/186 (40%), Gaps = 14/186 (7%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + +P P I+ GR NVGKSSL+N + + + A ++ PG T+ + V D+ Sbjct: 163 DDEDVPDIAPIRISLIGRPNVGKSSLLNAIT-QSDRAIVADLPGTTRD-SLDVEWDYGGQ 220 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + LVD G + P ++ + + ERS ++L+++ + + Sbjct: 221 R-----FVLVDTAGIR--KKPDTAIEDFAIQRSQAAIERSD--VIWLVVNAT-DIGDHEL 270 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + +V+ K D + + T + + + + + TS++ GI Sbjct: 271 KLANLAYDSGKPVIVVVNKWDLVPDAELKSTEKDLNQKL--HHISFAPRVYTSAINDYGI 328 Query: 200 EVLRKA 205 + Sbjct: 329 HDMLAE 334 >gi|322509029|gb|ADX04483.1| era [Acinetobacter baumannii 1656-2] Length = 340 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 40 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDSC------EKMQAVYVDT 92 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID + Q D V L + Sbjct: 93 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDAQ-KWTQNDDLVLEKLKNADM 146 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 147 PVILVINKADTFGDKREILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 202 Query: 211 NY 212 Y Sbjct: 203 PY 204 >gi|225430700|ref|XP_002264259.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 435 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+L N ++ +K L+ ++ P T+H + M L D Sbjct: 140 VAVLGKPNVGKSTLANQMIGQK-LSIVTDKPQTTRHRILGI------CSGPEYQMILYDT 192 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFLDKK-- 148 PG +K + ++++ + + CV +L+D ++ID+ + + Sbjct: 193 PG-----VIEKKMHKLDSMMMKNVRSATINADCVVVLVDACKEPQKIDEVLEEGVGNLKD 247 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +VL K D + P + LE + I EVIP S+ +G++ ++ IL Sbjct: 248 KLPTLLVLNKKDLIKPGEIAKKLEWYEKFI-----DVDEVIPVSAKYGQGVDDVKDWILS 302 Query: 209 TI 210 + Sbjct: 303 KL 304 >gi|251796400|ref|YP_003011131.1| GTP-binding protein EngA [Paenibacillus sp. JDR-2] gi|247544026|gb|ACT01045.1| small GTP-binding protein [Paenibacillus sp. JDR-2] Length = 440 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 73/180 (40%), Gaps = 13/180 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A GR NVGKSSL+N L+ + + SN G T+ + + + Sbjct: 173 DDDVIRVALIGRPNVGKSSLVNALLGEERV-IVSNVAGTTRDAI------DTPFERDGQK 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ + + + R L V +LI+ G+ + D+ + + Sbjct: 226 YVLIDTAGMRKRGKVYESTEKYSVM--RALKAIERADVVLVLINGEEGIIEQDKHIAGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 + + V+ K D + +T+++ IR++ + ++ S+ ++ + L Sbjct: 284 HEAGKASIFVVNKWDVVDKDD--KTMQEFTQNIRDHFLFMTYAPIVFLSAKTKQRLHKLL 341 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 65/182 (35%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS++ N +V LA + PG T+ + S + N A ++ Sbjct: 3 RPVIAIVGRPNVGKSTIFNRVVG-DRLAIVEDKPGVTRDRLY------SPGEWNGKAFSI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + ++ + + D + GV D +V L + Sbjct: 56 VDTGGIEIDGED----EIMKSVRMQAELAIEEADVIIFMCDAKTGVTHADDEVAQMLFRS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D L + + Y I S GI + A +E Sbjct: 112 HKPVVLAVNKVD---------NLNRMDEIYEFYGLGFGTPIAVSGSHGLGIGDMLDAAIE 162 Query: 209 TI 210 + Sbjct: 163 KL 164 >gi|297517161|ref|ZP_06935547.1| GTP-binding protein EngA [Escherichia coli OP50] Length = 202 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 11 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEIEGREFIC 63 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 64 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 118 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 119 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 168 >gi|209964703|ref|YP_002297618.1| GTP-binding protein EngA [Rhodospirillum centenum SW] gi|209958169|gb|ACI98805.1| GTP-binding protein, putative [Rhodospirillum centenum SW] Length = 478 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 65/176 (36%), Gaps = 20/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV K LA + PG T+ + + +VD Sbjct: 10 VAIVGRPNVGKSTLFNRLVG-KRLALVDDTPGVTRD------WRAGEARLAGIELTVVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++++ + + LID R GV +D +L K Sbjct: 63 AGLE--EVFDDSLEA--RMRRQTERAIERADVALFLIDARAGVTPLDHHFAGWLRKGRTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K E L+ + E +P S+ +G+ L +A+L Sbjct: 119 VILVANKA---------EGAAGRPGLLEAFELGLGEPVPLSAEHGEGLADLVEALL 165 Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 11/176 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS+L+N LV + + T G T+ + LVD Sbjct: 212 QLAIVGRPNVGKSTLLNALVGEERV-LTGPEAGMTRDAI------AVEWNWRGQPVRLVD 264 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + L V L++D + + D + + ++ Sbjct: 265 TAGLRRRARVDGKLEKLA--VADTLRVIRMAHVVVLVLDAHAILDKQDLTIARMVVEEGR 322 Query: 151 SYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D + + A + L P V S+++ + ++ L Sbjct: 323 ALVIAINKWDSVENKGAALKQLRDRLETSLPQVRGIPTV-TISALRGQRLDELLDV 377 >gi|163939419|ref|YP_001644303.1| GTP-binding protein EngA [Bacillus weihenstephanensis KBAB4] gi|229010911|ref|ZP_04168107.1| GTP-binding protein engA [Bacillus mycoides DSM 2048] gi|229058239|ref|ZP_04196627.1| GTP-binding protein engA [Bacillus cereus AH603] gi|229132411|ref|ZP_04261265.1| GTP-binding protein engA [Bacillus cereus BDRD-ST196] gi|229166450|ref|ZP_04294206.1| GTP-binding protein engA [Bacillus cereus AH621] gi|229710726|sp|A9VMB3|DER_BACWK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|163861616|gb|ABY42675.1| small GTP-binding protein [Bacillus weihenstephanensis KBAB4] gi|228617024|gb|EEK74093.1| GTP-binding protein engA [Bacillus cereus AH621] gi|228651117|gb|EEL07098.1| GTP-binding protein engA [Bacillus cereus BDRD-ST196] gi|228720103|gb|EEL71687.1| GTP-binding protein engA [Bacillus cereus AH603] gi|228750311|gb|EEM00141.1| GTP-binding protein engA [Bacillus mycoides DSM 2048] Length = 436 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DDETIRFSLIGRPNVGKSSLVNALLGQERV-IVSNIAGTTRDAV------DTPYSKDDQD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ +K + L Sbjct: 283 HDSGRAVIIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLEYAPIVFLSAKTKKRTQTLL 340 Query: 204 KAILE 208 I E Sbjct: 341 PVINE 345 Score = 92.5 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGITRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D + + Y E P S G+ L Sbjct: 112 KPIVLAVNKVD---------NPDMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDE 158 >gi|258545523|ref|ZP_05705757.1| GTP-binding protein EngA [Cardiobacterium hominis ATCC 15826] gi|258519223|gb|EEV88082.1| GTP-binding protein EngA [Cardiobacterium hominis ATCC 15826] Length = 463 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 10/177 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKS+L+N L+ + L S G T+ +D L+D Sbjct: 200 LAVIGRPNAGKSTLLNRLIGEERLV-ASPVAGTTRDAIAIPYEDAQG-----DRFTLIDT 253 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ + IV+ L V L++D GV + D + + ++ + Sbjct: 254 AGIRRKARVNDKIEKFS--IVKTLDAIERANVVILMLDAHEGVSEQDAHLLGEITRRGRA 311 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 I + K D L+ Q + + + + + EV S++ I L A+ + Sbjct: 312 LIIAINKWDHLNDEQRQAIRSQFERKL--HFVDYAEVFYISALHGSNIRQLLPAVKK 366 Score = 98.3 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 20/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ + S+ PG T+ N+ + +V Sbjct: 16 PLVALVGRPNVGKSTLYNALTRSRD-SLVSDTPGLTRDRNY------GDATLAGMPCRIV 68 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G R + +D + + V ++D R G+ +D+ + + L + Sbjct: 69 DTGGL--LREEEDQIDRRVD--KQARAAVEEADIVVFVVDGRDGLTAVDETIAAELRRSQ 124 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K D P L Y + + ++ R+G++ L + I+ Sbjct: 125 KPVILAVNKTDFADPDLI---------LADFYTLGIADTLAIAAEHRRGLQQLTQRIVTR 175 Query: 210 I 210 + Sbjct: 176 L 176 >gi|239907769|ref|YP_002954510.1| GTP-binding protein EngA [Desulfovibrio magneticus RS-1] gi|259645872|sp|C4XIQ6|DER_DESMR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|239797635|dbj|BAH76624.1| GTP-binding protein EngA [Desulfovibrio magneticus RS-1] Length = 444 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 20/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP +A GR NVGKS+L N L + A T + PG T+ + + + L Sbjct: 2 PPIVAIVGRPNVGKSTLFNRLTRGRR-AITHDLPGVTRDRL------EAPAEIEGRFVTL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G Y ++ + + T V L+D + G ++ D+ L + Sbjct: 55 VDTGGMDYEAEESLARQ----IVEQAEAALVTADVVLFLVDGKAGRTALEDDLAERLRRL 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D LE+ + ++ ++ S+ +G+ L +AI E Sbjct: 111 GKPVIVAVNKVD---------GLERVAAMTADFHAWGLPLLAISAAHGQGMAELAEAIAE 161 Query: 209 TI 210 + Sbjct: 162 RL 163 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 66/172 (38%), Gaps = 11/172 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKSSLIN LV L S+ G T+ V VD Sbjct: 182 LAVLGRPNAGKSSLINALVGESRL-IVSDIAGTTRDAVDVVV------HQKGKRYLFVDT 234 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ + + + LS ++ID GV D+ + SFLD + + Sbjct: 235 AGVRKRTRITDGLERYS--VAKALSSAKRADVAVVVIDATGGVGVQDKRLISFLDSERKA 292 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + + K D + + +R +H V+ S+ K KG+ + Sbjct: 293 FLVAVNKTDLVPQKDMLALQKDIARELRM--CSHVPVLYMSAAKGKGVAKVL 342 >gi|229029283|ref|ZP_04185373.1| GTP-binding protein engA [Bacillus cereus AH1271] gi|229172241|ref|ZP_04299805.1| GTP-binding protein engA [Bacillus cereus MM3] gi|228611229|gb|EEK68487.1| GTP-binding protein engA [Bacillus cereus MM3] gi|228732031|gb|EEL82923.1| GTP-binding protein engA [Bacillus cereus AH1271] Length = 436 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DDETIRFSLIGRPNVGKSSLVNALLGQERV-IVSNIAGTTRDAV------DTPYSKDGQD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ +K + L Sbjct: 283 HDSGRAVIIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLEYAPIVFLSAKTKKRTQTLL 340 Query: 204 KAILE 208 I E Sbjct: 341 PVINE 345 Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGITRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S G+ L Sbjct: 112 KPIVLAVNKVD---------NPEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDE 158 >gi|289578133|ref|YP_003476760.1| GTP-binding protein Era [Thermoanaerobacter italicus Ab9] gi|289527846|gb|ADD02198.1| GTP-binding protein Era [Thermoanaerobacter italicus Ab9] Length = 302 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N ++ K +A TS P T++ + L + + VD Sbjct: 8 VALIGRTNVGKSTLLNAILQEK-IAITSPKPQTTRNTIRGI------LTTDEYQVIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + +I + + +I+ + D+ + L + Sbjct: 61 PGI---HKPKSKLSEF--MIEVAKRTLKEVDLILYMIEPDTEIGPGDRYIIEHLKEVDTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + +ET++ K A +V+ S+++ K I++L++ I+ + Sbjct: 116 VILVVNKIDLVPEERIEETIKIFKKE-----YAFKDVVAISAIENKNIDLLKEKIVSLL 169 >gi|289434744|ref|YP_003464616.1| GTP-binding protein Era [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170988|emb|CBH27530.1| GTP-binding protein Era [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|313633219|gb|EFS00091.1| GTP-binding protein Era [Listeria seeligeri FSL N1-067] Length = 301 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 17/173 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ T++ V + + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQK-IAIMSDKAQTTRNKVQGVYT------TDESQIIFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + I L+ + +Y +ID G + D+ + L Sbjct: 63 PGI---HKPKHKLGDFMVKIA--LNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQTP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +++ KID +SP + +E+ + L+ E+IP S+++ + L + Sbjct: 118 VFLLINKIDLISPEELFKLIEQYRELL-----DFEEIIPISALQGNNVPNLLE 165 >gi|254526548|ref|ZP_05138600.1| small GTP-binding protein domain [Prochlorococcus marinus str. MIT 9202] gi|221537972|gb|EEE40425.1| small GTP-binding protein domain [Prochlorococcus marinus str. MIT 9202] Length = 457 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 19/199 (9%) Query: 21 IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 IG LP+ + ++ GR NVGKSSL+N + K A S+ G T Sbjct: 162 IGELPENNIQDDEEKIMMSIIGRPNVGKSSLLNSICGEKR-AIVSDISGTTTDSI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + +K ++D G + K + +G I R L+ID GV Sbjct: 216 -DTLIKKGDNYWKIIDTAGIRRKKNVKYGTEFFG--INRAFKSIDRSDVCVLVIDAVDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTS 192 DQ + ++++ + IV+ K D + T+ + + +R+ Y ++I S Sbjct: 273 TDQDQKLAGRIEEQGRACIIVVNKWDLVEKN--SSTIYQVEKELRSKLYFLHWSKMIFIS 330 Query: 193 SVKRKGIEVLRKAILETIN 211 ++ + ++ + + L +N Sbjct: 331 ALTGQRVDNIFEHALNAVN 349 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L+N L + N A + PG T+ + + N + Sbjct: 3 LPTIAIIGRPNVGKSTLVNRLC-QSNDAIVFDKPGVTRD------RTYQNASWGGKEFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + L++D GV D + +L Sbjct: 56 VDTGGLVFDDDSEFLPEIRTQV----FLALEEASLALLVVDGNQGVTDGDLSIAKWLRNS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K + T + E P S++ G L ++ Sbjct: 112 SCKTIVAVNKC--------ESTTLGISLASEFWKLGLGEPNPVSAIHGSGTGDLLDLVI 162 >gi|153007833|ref|YP_001369048.1| GTP-binding protein EngA [Ochrobactrum anthropi ATCC 49188] gi|166225832|sp|A6WW65|DER_OCHA4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|151559721|gb|ABS13219.1| small GTP-binding protein [Ochrobactrum anthropi ATCC 49188] Length = 483 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGRK-LALVDDLPGVTRDRRIHDAKLYDL------KFQVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + + + ++D ++G+ D + + Sbjct: 58 AGLEEAANDSLEA----RMRAQTEAAIQEADVILFVVDAKNGLTPTDSTFAEVVRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + E P S+ +G+ LR AI+E + Sbjct: 114 VVLVANKA---------EARGAQSGMYDAFQLGLGEPCPISAEHGQGMPDLRDAIVELLG 164 Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 69/185 (37%), Gaps = 13/185 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P IA GR N GKS+LIN ++ L T G T+ + + + Sbjct: 209 TKPLRIAIVGRPNAGKSTLINTMLGEDRL-LTGPEAGITRDSI------SVDWEWRGRKI 261 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L D G ++ ++ + L V +++D ++ D + + Sbjct: 262 KLFDTAGLRRKSRVQEKLEKLS--VADGLRAIRFAEVVIIVLDATIPFEKQDLQIADLII 319 Query: 147 KKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 ++ + I K D + + EKT L+ +P S + +GI+ L + Sbjct: 320 REGRAPIIAFNKWDLIEDRQMVLADLYEKTARLLPQVRGLRA--VPISGERGQGIDKLME 377 Query: 205 AILET 209 +++T Sbjct: 378 NVVKT 382 >gi|157412804|ref|YP_001483670.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9215] gi|166920102|sp|A8G3A3|DER_PROM2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|157387379|gb|ABV50084.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str. MIT 9215] Length = 457 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 19/199 (9%) Query: 21 IGLLPKAGP------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 IG LP+ ++ GR NVGKSSL+N + K A S+ G T Sbjct: 162 IGELPENNIRDDEEKIMMSIIGRPNVGKSSLLNSICGEKR-AIVSDISGTTTDSI----- 215 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 + +K ++D G + K + +G I R L+ID GV Sbjct: 216 -DTLIKKGDNYWKIIDTAGIRRKKNVKYGTEFFG--INRAFKSIDRSDVCVLVIDAVDGV 272 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTS 192 DQ + ++++ + IV+ K D + T+ + + +R+ Y ++I S Sbjct: 273 TDQDQKLAGRIEEQGRACIIVVNKWDLVEKN--SSTIYQVEKELRSKLYFLHWSKMIFIS 330 Query: 193 SVKRKGIEVLRKAILETIN 211 ++ + ++ + + L +N Sbjct: 331 ALTGQRVDNIFEHALNAVN 349 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 19/179 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L+N L + N A + PG T+ + + N + Sbjct: 3 LPTIAIIGRPNVGKSTLVNRLC-QSNDAIVFDKPGVTRD------RTYQNASWGGKEFQI 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + L++D GV D + +L Sbjct: 56 VDTGGLVFDDDSEFLPEIRTQV----FLALEEASLALLVVDGNQGVTDGDLSIAKWLRNS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K + T + E P S++ G L ++ Sbjct: 112 SCKTIVAVNKC--------ESTTLGISLASEFWKLGLGEPNPVSAIHGSGTGDLLDLVI 162 >gi|77165915|ref|YP_344440.1| GTP-binding protein Era [Nitrosococcus oceani ATCC 19707] gi|76884229|gb|ABA58910.1| GTP-binding protein Era [Nitrosococcus oceani ATCC 19707] Length = 306 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 26/184 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N ++ +K ++ TS P T+H + VD Sbjct: 18 IAIIGRPNVGKSSLLNRILGQK-ISITSRRPQTTRHRILGI------KTLAGIQAIYVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-----SERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 PG+ D L+ RYL S + + +I+ + D+ + L Sbjct: 71 PGFQ---------DKERRLMNRYLNRAIDSTLEEVDLILFVIEAFQ-FTKDDEWILQRLR 120 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + AV +VL K+D++ + L L + +IP S+ K + VL + Sbjct: 121 RCAVPIVLVLNKVDRI--IDKKSLLPAIATLSKKR--EFAAIIPVSAWKGDNVAVLESKV 176 Query: 207 LETI 210 E + Sbjct: 177 AELL 180 >gi|332977201|gb|EGK13997.1| ribosome-associated GTPase EngA [Desmospora sp. 8437] Length = 455 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 20/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L N + + +A + PG T+ + D+S Sbjct: 17 SLPVVAIVGRPNVGKSTLFNRIAGER-IAIVEDKPGITRDRI-YTRGDWSGRH-----FH 69 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G + + + V+ + E + ++D GV D++V L + Sbjct: 70 VIDTGGLEFGKK-DEVVEHIRHQAELAIEE---ADVILFMVDGHDGVTSTDEEVSRILHR 125 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D + + Y E I SS+ G L A++ Sbjct: 126 SNKPVVLAVNKLDDVKHHE---------NVYEFYRLGFDEPIGISSLHGTGTGDLLDAVV 176 Query: 208 ETI 210 + + Sbjct: 177 DRL 179 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 13/174 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++ GR NVGKSSL+N ++ + + S G T+ + + Sbjct: 188 DSDTIRVSIIGRPNVGKSSLVNRILGEERV-IVSPVAGTTRDAV------DTPFTHEGQD 240 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G + + + L R L V +++D GV + D+ V Sbjct: 241 YVIVDTAGMRKRGKVYETTEKYSVL--RALRAIERADVVLIVLDGTEGVTEQDKRVAGIA 298 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRK 197 V+ K D + +T+ + IR + ++ TS+ + Sbjct: 299 HDAGRGAVFVVNKWDAVEKDD--QTMNRMIRDIRQEFAFMDYAPILFTSAKTGQ 350 >gi|82703488|ref|YP_413054.1| GTP-binding protein EngA [Nitrosospira multiformis ATCC 25196] gi|123768150|sp|Q2Y6F9|DER_NITMU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|82411553|gb|ABB75662.1| Small GTP-binding protein domain [Nitrosospira multiformis ATCC 25196] Length = 466 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 67/178 (37%), Gaps = 10/178 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K P+IA GR NVGKS+L+N L+ + + + PG T+ + + + N Sbjct: 172 KDDHPKIAIVGRPNVGKSTLVNTLLGEERV-IAFDQPGTTRDSIYI------DFERNGRT 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + +V+ L V L++D + D + F+ Sbjct: 225 YTLIDTAGLRRRGKVQETVEKFS--VVKTLQAIEDANVVILVLDAASEISDQDAHIGGFI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + + + K D L + + S++ G + L Sbjct: 283 LEAGRALVLAVNKWDSLDEYQRDMIKRDINRKL-PFLQNFARFHYISALHGTGTKGLL 339 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 59/173 (34%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P + GRSNVGKS+L N L ++ A ++ PG T+ + + + K +V Sbjct: 3 PTLVLVGRSNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGHGKLGDRPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + L V ++D R G+ D+ V L + Sbjct: 56 DTGGFEPMATEG----ILHEMAKQTLQAIDEADVVLFIVDGRSGLTAQDKIVAEQLRRSG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + K E + + + E S+ + L Sbjct: 112 RRTLLAVNKT---------EGMAVSVVTAEFHELGLGEPCAISAAHGDNVNEL 155 >gi|254519865|ref|ZP_05131921.1| GTP-binding protein Era [Clostridium sp. 7_2_43FAA] gi|226913614|gb|EEH98815.1| GTP-binding protein Era [Clostridium sp. 7_2_43FAA] Length = 296 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 76/179 (42%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ K L+ SN P T++ + L + VD Sbjct: 7 VTIVGRPNVGKSTLLNHIMGEK-LSIVSNKPQTTRNNIQTI------LTGKDHQLVFVDT 59 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + ++ + V LI+ + + D+ + L + Sbjct: 60 PGIHKPK-----HKLGEYMVNSAKDSIKEVDLVLFLINPEEEIGRGDKFIIETLKNQKAP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID+ + +TL+ + E+IP S+++ K ++ L + ++ET+ Sbjct: 115 VFLVVNKIDEFTQERVAKTLQMYSSELE-----FKEIIPISALRGKNVDKLVELMIETM 168 >gi|116071134|ref|ZP_01468403.1| GTP-binding protein EngA [Synechococcus sp. BL107] gi|116066539|gb|EAU72296.1| GTP-binding protein EngA [Synechococcus sp. BL107] Length = 455 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 16/189 (8%) Query: 21 IGLLPKAG-------PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP P +++ GR NVGKSSL+N + + A S G T+ Sbjct: 162 LTFLPPKDQEGDEEEPIQMSIIGRPNVGKSSLLNAICGEQR-AIVSPIRGTTRDTI---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +N+ LVD G R+ + +G I R L+ID G Sbjct: 217 --DTNIVRENRPWRLVDTAGIRRRRSVNYGPEYFG--INRSFKAIERSDVCVLVIDALDG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + DQ + +++ + +V+ K D + + + + + + Y ++ TS+ Sbjct: 273 VTEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTMSATEKELRAKLYFLDWAPMLFTSA 332 Query: 194 VKRKGIEVL 202 + + +E + Sbjct: 333 LTGQRVESI 341 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 69/183 (37%), Gaps = 21/183 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L R A + PG T+ + + + + Sbjct: 3 RPVVAIIGRPNVGKSTLVNRLC-RSREAIVHDQPGVTRD------RTYQDGYWGDREFKV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + +++D + G+ D+ + FL ++ Sbjct: 56 VDTGGLVF----DDDSEFLPEIREQAALALDEASVALVIVDGKQGLTAADESIAEFLRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTSSVKRKGIEVLRKAIL 207 + + K E++E+ + + + E P S++ G + +L Sbjct: 112 RCPTLLAVNKC---------ESVEQGLAMAAEFWSLGLGEPYPISAIHGAGTAEVLDKVL 162 Query: 208 ETI 210 + Sbjct: 163 TFL 165 >gi|78184221|ref|YP_376656.1| GTP-binding protein EngA [Synechococcus sp. CC9902] gi|123581907|sp|Q3AZ65|DER_SYNS9 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|78168515|gb|ABB25612.1| Small GTP-binding protein domain [Synechococcus sp. CC9902] Length = 455 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 16/189 (8%) Query: 21 IGLLPKAG-------PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP P +++ GR NVGKSSL+N + + A S G T+ Sbjct: 162 LTFLPPKDQEGDEEEPIQMSIIGRPNVGKSSLLNAICGEQR-AIVSPIRGTTRDTI---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 +N+ LVD G R+ + +G I R L+ID G Sbjct: 217 --DTNIVRENRPWRLVDTAGIRRRRSVNYGPEYFG--INRSFKAIERSDVCVLVIDALDG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 V + DQ + +++ + +V+ K D + + + + + + Y ++ TS+ Sbjct: 273 VTEQDQRLAGRIEEDGRACVVVVNKWDAVEKDSHTMSATEKELRAKLYFLDWAPMLFTSA 332 Query: 194 VKRKGIEVL 202 + + +E + Sbjct: 333 LTGQRVESI 341 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 69/183 (37%), Gaps = 21/183 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L R A + PG T+ + + + + Sbjct: 3 RPVVAIIGRPNVGKSTLVNRLC-RSREAIVHDQPGVTRD------RTYQDGYWGDREFKV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + +++D + G+ D+ + FL ++ Sbjct: 56 VDTGGLVF----DDDSEFLPEIREQAALALDEASVALVIVDGKQGLTAADESIAEFLRQQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTSSVKRKGIEVLRKAIL 207 + + K E++E+ + + + E P S++ G + +L Sbjct: 112 RCPTLLAVNKC---------ESVEQGLAMAAEFWSLGLGEPYPISAIHGAGTAEVLDQVL 162 Query: 208 ETI 210 + Sbjct: 163 TFL 165 >gi|296269475|ref|YP_003652107.1| small GTP-binding protein [Thermobispora bispora DSM 43833] gi|296092262|gb|ADG88214.1| small GTP-binding protein [Thermobispora bispora DSM 43833] Length = 476 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 70/187 (37%), Gaps = 22/187 (11%) Query: 25 PKAG-PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 P G P +A GR NVGKS+L+N ++ R+ A + PG T+ + Sbjct: 33 PDPGRLPVVAVVGRPNVGKSTLVNRILGRRA-AVVEDVPGVTRDRVAY------EASWQG 85 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 LVD G+ + + L+ V ++D GV D+ V S Sbjct: 86 RRFTLVDTGGWDPDATGMALRIAEQAQVAAELA-----DVVLFVVDATVGVTDADEAVGS 140 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 L + +V K D Q LE T + E P S++ +G L Sbjct: 141 VLRRSGKPVLLVANKAD-----NQQVELEAT----ALWSLGLGEPYPISALHGRGTGDLL 191 Query: 204 KAILETI 210 A+L+ + Sbjct: 192 DAMLDAL 198 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 70/200 (35%), Gaps = 22/200 (11%) Query: 21 IGLLPKAGPPE---------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 + LP P E +A GR NVGKSSL+N + + + PG T+ Sbjct: 195 LDALPTPPPQEAGAPRGPRRVALVGRPNVGKSSLLNRMAGEERV-LVDPMPGTTRDPV-- 251 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR 131 ++ VD G K D + + R ERS +LID Sbjct: 252 ----DELIELGGKTYRFVDTAGIRRRDRELKGADFYAAMRTRSALERSE--AAVVLIDAS 305 Query: 132 HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKT-KYLIRNYPTAHPEVIP 190 + + D + S + + + + K D L ++ + L+R + Sbjct: 306 EPLTEQDLRIISLVAESGRAMVLAFNKWDLLDEERRYYLEKEIDRKLVRTPWAIRVNI-- 363 Query: 191 TSSVKRKGIEVLRKAILETI 210 S+ + +E L AI + Sbjct: 364 -SAKTGRHVEKLGPAIDRAL 382 >gi|258647985|ref|ZP_05735454.1| ribosome-associated GTPase EngA [Prevotella tannerae ATCC 51259] gi|260851826|gb|EEX71695.1| ribosome-associated GTPase EngA [Prevotella tannerae ATCC 51259] Length = 437 Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 12/182 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P A GR N GKSSLIN + + ++ G T+ F Sbjct: 172 ENNIPHFAIVGRPNAGKSSLINAFIGEERN-IVTDIAGTTRDSILTRYDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + LLID G++ D ++F + Sbjct: 225 FYLVDTAGIRKKGKVNEDLEFYSVM--RSIRAIEHSDVCILLIDATRGIESQDMNIFKVI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 K S + + K D ++ +QE ++ +I++ P ++ S++ ++ I + Sbjct: 283 QKNNKSLVVAINKWD-IAENKSQEAIKHFIEVIKSRMAPFDDFPIVFCSALTKQRIYKVL 341 Query: 204 KA 205 + Sbjct: 342 ET 343 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S G T+ + + ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTGTRQ-AIVSEEAGTTRDRQY------GKCEWGGQIFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + G + + L + L+D + G+ +D+DV L + + Sbjct: 58 GG----WVVNSDDIFEGEIRKQVLVATEEADLILFLVDNQTGITDLDEDVAMILRQANIP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + KI + +++ Y E S++ G L I+E + Sbjct: 114 VILCANKI--------ENNIDRY-NASEFYKLGLGEPNCLSAITGSGTGDLLDTIIERLG 164 >gi|167947351|ref|ZP_02534425.1| GTPase EngB [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 86 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 9/86 (10%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 FL+ ++ P E+AF+GRSN GKSS +N+L N+K+LARTS PGRTQ LNFF Sbjct: 10 FLKSAAKLSQAPADQGIEVAFAGRSNAGKSSALNLLCNQKSLARTSKTPGRTQLLNFFGL 69 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARA 99 + LVD+PGYGYA+ Sbjct: 70 DE---------QRRLVDLPGYGYAKV 86 >gi|90961863|ref|YP_535779.1| GTP-binding protein EngA [Lactobacillus salivarius UCC118] gi|227890889|ref|ZP_04008694.1| GTP-binding protein EngA [Lactobacillus salivarius ATCC 11741] gi|122448999|sp|Q1WTQ4|DER_LACS1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|90821057|gb|ABD99696.1| GTP-binding protein [Lactobacillus salivarius UCC118] gi|227867298|gb|EEJ74719.1| GTP-binding protein EngA [Lactobacillus salivarius ATCC 11741] gi|300214593|gb|ADJ79009.1| GTP-binding protein engA [Lactobacillus salivarius CECT 5713] Length = 436 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 12/194 (6%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 ++ P+ + + +F GR NVGKSSL+N ++ + SN G T+ Sbjct: 160 IKEFPKDATNEEDDSIKFSFIGRPNVGKSSLVNAILGENRV-IVSNIEGTTRDAI----- 213 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 D + ++D G +N + + L +RS + CV L + G+ Sbjct: 214 DTRFETEDGTKYTMIDTAGIRKKGKVYENTEKYSVLRAMRAIDRSDVVCVVL--NAEEGI 271 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTS 192 ++ D+ V + + + IV+ K D L +T+ + LIR ++ ++ S Sbjct: 272 REQDKHVAGYAHEAGRAIVIVVNKWDTLKKD--NKTMSDFENLIRQEFQYLSYAPIVFVS 329 Query: 193 SVKRKGIEVLRKAI 206 + ++ ++ L + I Sbjct: 330 AKTKQRLDKLPELI 343 Score = 95.6 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N L + ++ + PG T+ + ++ NL + Sbjct: 4 PVVAIVGRPNVGKSTIFNRLAGER-ISIVEDTPGVTRDRI-YARTEWLGHPFNLIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + + + ++ + GV D+ V L + Sbjct: 62 DIGDEPFLTQITEQAEI----------AIEEADVIIFVVSVKEGVTDADEKVARILYRTD 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D E + Y E IP + G L I++ Sbjct: 112 KPVVLAVNKVD---------NPELRADIYDFYSLGFGEPIPVAGTHGIGTGDLLDKIIK 161 >gi|78066578|ref|YP_369347.1| GTP-binding protein EngA [Burkholderia sp. 383] gi|123728977|sp|Q39FR3|DER_BURS3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|77967323|gb|ABB08703.1| Small GTP-binding protein [Burkholderia sp. 383] Length = 445 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGIKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L S V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D L ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGLDEHARDRAKADLTRKLKFLDFAKSHYI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVATDFYELGLGDPRAISAAHGDGV 152 >gi|282855425|ref|ZP_06264746.1| ribosome-associated GTPase EngA [Pyramidobacter piscolens W5455] gi|282586721|gb|EFB91968.1| ribosome-associated GTPase EngA [Pyramidobacter piscolens W5455] Length = 443 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 13/186 (6%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ G +A GR NVGKSS++N L + + S+ PG T+ + L+ Sbjct: 171 PEEGVISVALVGRPNVGKSSILNALTGSQR-SLVSDIPGTTRDSI------DAVLEYKGE 223 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +VD G K +++ + VR + ++D R + DQ + Sbjct: 224 RFRIVDTAGLRRKSRVKDDIEFYS--TVRTMDAVDQCDVAIFVMDVRELATEQDQRLVGE 281 Query: 145 LDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + +V+ K D L +P T E K + R +H V+ TS+V + + L Sbjct: 282 ILARGKGVVLVVNKWDLLPNTPETGDEVNGKLREEFR--FASHAPVLFTSAVSGRRLHRL 339 Query: 203 RKAILE 208 + + Sbjct: 340 LDLVSQ 345 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKSSL N ++ + A + PG T+ + + + +VD Sbjct: 4 VSIVGRPNVGKSSLFNRIIGERR-AIVDDMPGVTRDRLYGCVQWKDK------SFYVVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ I + + E V ++D GV +D+DV L + Sbjct: 57 GGL-LLKDKDPIMEGMKDQIFQAIEES---DVVIFMVDGSRGVTWMDEDVAQVLRSHSSM 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + + KID S + Y +V+ S++ +GI+ L +++ + Sbjct: 113 VILAVNKIDDFSHED---------DVAEAYSLGFEKVVGVSALHDRGIDELLDQVVQMLG 163 >gi|254433531|ref|ZP_05047039.1| GTP-binding protein Era [Nitrosococcus oceani AFC27] gi|207089864|gb|EDZ67135.1| GTP-binding protein Era [Nitrosococcus oceani AFC27] Length = 303 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 26/184 (14%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL+N ++ +K ++ TS P T+H + VD Sbjct: 15 IAIIGRPNVGKSSLLNRILGQK-ISITSRRPQTTRHRILGI------KTLAGIQAIYVDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-----SERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 PG+ D L+ RYL S + + +I+ + D+ + L Sbjct: 68 PGFQ---------DKERRLMNRYLNRAIDSTLEEVDLILFVIEAFQ-FTKDDEWILQRLR 117 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + AV +VL K+D++ + L L + +IP S+ K + VL + Sbjct: 118 RCAVPIVLVLNKVDRI--IDKKSLLPAIATLSKKR--EFAAIIPVSAWKGDNVAVLESKV 173 Query: 207 LETI 210 E + Sbjct: 174 AELL 177 >gi|260551499|ref|ZP_05825683.1| GTP-binding protein 16S rRNA-binding, ribosome-associated GTPase [Acinetobacter sp. RUH2624] gi|260405493|gb|EEW98986.1| GTP-binding protein 16S rRNA-binding, ribosome-associated GTPase [Acinetobacter sp. RUH2624] Length = 342 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID + Q D V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDA-YKWTQNDDLVLEKLKNAEM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 149 PVILVINKADTFEDKREILPLIQERTKLMNFA----EIVPVSALRGANLEHLSETIEKYL 204 Query: 211 NY 212 Y Sbjct: 205 PY 206 >gi|288818845|ref|YP_003433193.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|288788245|dbj|BAI69992.1| GTP-binding protein [Hydrogenobacter thermophilus TK-6] gi|308752432|gb|ADO45915.1| ribosome-associated GTPase EngA [Hydrogenobacter thermophilus TK-6] Length = 432 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 79/188 (42%), Gaps = 13/188 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +++F GR NVGKSSLIN ++ + + S G T+ + Sbjct: 170 EYSGIKVSFVGRPNVGKSSLINAILGSERV-IVSEVAGTTRDAV------EVPFEYKGKE 222 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + + R + V L++D G+ D+ + + Sbjct: 223 FVLIDTAGIRRRPKVEYGVEFFA--VGRSIKAIEMSDVVCLVLDISEGITNQDKKIAGLI 280 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI-EVLRK 204 +++ IV K D + T Q K L + ++ TS+++++GI ++L Sbjct: 281 ERRFKGCVIVANKFDLVKATKEQAQDYIRKEL---HFLDFAPIVFTSAIRQEGIQDILDN 337 Query: 205 AILETINY 212 AIL +Y Sbjct: 338 AILVYQDY 345 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 67/176 (38%), Gaps = 21/176 (11%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++ GR NVGKS+L N +V R+ + PG T+ + S + D Sbjct: 4 QVLIVGRPNVGKSTLFNRIVGRRK-SIVHGIPGVTRDII------ESEASWKDKKFMVAD 56 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + + + LSE + ++D R G+ D+ + L Sbjct: 57 TGGI--FEGGEEMSEKVEKQVKKALSEAQ---VILFVVDGREGITAGDEYIARMLYPYRE 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KID E L+ K + Y +V P S+ G+ L A+ Sbjct: 112 KVFLVVNKID-------SEKLQ--KNVYDFYALGFEKVFPVSAQHGIGVAELLDAL 158 >gi|90418692|ref|ZP_01226603.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1] gi|90336772|gb|EAS50477.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1] Length = 469 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N LV K LA + PG T+ + +VD Sbjct: 4 IAIIGRPNVGKSTLFNRLVG-KRLALVDDRPGVTRDRR------TGDATLLDLDFEVVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A A G + + + ++ +ID + GV D+ + + A Sbjct: 57 AGLEEAGADTLE----GRMRTQTETAIASADLCLFMIDVKAGVMPQDRAFVEIMRRTAGK 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E ++ + E I S+ G+ LR AILE + Sbjct: 113 VILVANKS---------EARGAEAGMLDAFELGLGEPIGISAEHGVGMGELRDAILEALG 163 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 13/185 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P IA GR N GKS+LIN + + T G T+ S + + Sbjct: 195 TKPLRIAIVGRPNAGKSTLINRFLGEDRM-LTGPEAGITRDSI------ASEWEWRGRTI 247 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 + D G ++ ++ + L V ++ D ++ D + + Sbjct: 248 KVFDTAGMRRKAKVQEKLEKLS--VADGLRAIKFAEVVVVVFDATIPFERQDMSIVDLVM 305 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLRK 204 ++ + I K D + QE L + I S +G+E L K Sbjct: 306 REGRAPVIAFNKWDLI--EDRQEVLADLREKTDRLLPQARGIRAITVSGETGEGVERLMK 363 Query: 205 AILET 209 AI++T Sbjct: 364 AIVDT 368 >gi|288930105|ref|ZP_06423943.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 317 str. F0108] gi|288328578|gb|EFC67171.1| ribosome-associated GTPase EngA [Prevotella sp. oral taxon 317 str. F0108] Length = 437 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G P A GR N GKSS++N + + G T+ + F Sbjct: 172 EDGIPRFAVVGRPNAGKSSIVNAFIGEDRN-IVTEIAGTTRDSIYTRFDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L+ID G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEFYSVM--RSIRAIEHSDVCILMIDATRGIESQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 K S +V+ K D + P Q+ ++ + IR P +I S++ ++ I Sbjct: 283 QKNQKSLVVVVNKWDLV-PDKDQKVIKTFENAIRERMAPFVDFPIIFASALTKQRI 337 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 65/180 (36%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L ++ A S+ G T+ + ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLTKTRS-AIVSDTAGTTRDRQY------GKCDWAGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G+ D + I R L V L+D GV +D+DV L + V Sbjct: 58 GGWVVNSD-----DIFEDAIRRQVLVATEEADLVLFLVDVNTGVTDLDEDVAQILRRTKV 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D E+ Y + P S+ G L A++ + Sbjct: 113 PVVLVVNKAD---------NNEQIYEAPAFYSLGLGDPFPISAATGSGTGDLLDAVIAQL 163 >gi|258622344|ref|ZP_05717369.1| GTP-binding protein [Vibrio mimicus VM573] gi|262170591|ref|ZP_06038269.1| GTP-binding protein Era [Vibrio mimicus MB-451] gi|258585360|gb|EEW10084.1| GTP-binding protein [Vibrio mimicus VM573] gi|261891667|gb|EEY37653.1| GTP-binding protein Era [Vibrio mimicus MB-451] Length = 324 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V D VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETD------GNYQAIYVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVLFVVEGTH-WTADDEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + +++P S+ + K +VL+K + + + Sbjct: 140 PVVLCVNKVDQVK--DRNEVMLHMLELSKR--MQFVDIVPISAKQGKNTDVLKKHVRDHL 195 >gi|315655298|ref|ZP_07908198.1| ribosome-associated GTPase EngA [Mobiluncus curtisii ATCC 51333] gi|315490238|gb|EFU79863.1| ribosome-associated GTPase EngA [Mobiluncus curtisii ATCC 51333] Length = 523 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 26/194 (13%) Query: 20 EIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 + LP P +A GR NVGKS+L+N ++ R+ A + PG T+ + + Sbjct: 76 DDAGLPAVPNWPTLAVVGRPNVGKSTLVNRILGRRE-AVVLDEPGVTRDRVMY------D 128 Query: 79 LKNNLPAMALVDMPG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 N LVD G G + + D I ++D G Sbjct: 129 AHWNGRNFHLVDTGGWDVGVSGLDRAVADQAEIAIDL-------ADAALFVVDANVGATA 181 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + L + +V K+D + QE + + P S++ Sbjct: 182 TDERLMKLLRRAGKPVLLVANKVD----SERQEA-----DAAALWNLGMGQPYPISALHG 232 Query: 197 KGIEVLRKAILETI 210 +G L AIL+ + Sbjct: 233 RGTGDLLDAILQVL 246 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 11/171 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKSSL+N L A S PG T+ L+ + Sbjct: 258 EDSTPRVALVGRPNVGKSSLLNSLSG-AGRAVVSEVPGTTRDPV------DEVLELDGQQ 310 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G D + L + + +L+D + + D V + + Sbjct: 311 WVFVDTAGVRRRVKRSVGADYYSVLRTQ--AAIENADVALVLLDGGEPLTEQDVRVVNQV 368 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + + +V K D + Q L+ + + + P+ I S+ Sbjct: 369 IEAGRALVLVNNKWDLV-DEYRQGELKYEQEADLAHVSWAPK-INISAKTG 417 >gi|223985698|ref|ZP_03635745.1| hypothetical protein HOLDEFILI_03051 [Holdemania filiformis DSM 12042] gi|223962309|gb|EEF66774.1| hypothetical protein HOLDEFILI_03051 [Holdemania filiformis DSM 12042] Length = 298 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 17/174 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKS+L+N LV +K +A S P T++ + D + + VD Sbjct: 6 VALIGRPNAGKSTLLNALVQQK-VAIISPKPQTTRNSIRAIRTDADS------QIIFVDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + + + S S + +Y L+D D+ V + L + + Sbjct: 59 PGIHKPK-----HELGTQMNKEAYSAASGVDLIYYLVDGSVPFGSGDEFVLNTLRQMHLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++L KID L + L + + E+IP S+ + ++ L + Sbjct: 114 VYLILNKIDLLEKEQLIDLLLAWQQRM-----DFKEIIPISAKTQNNLDQLIEV 162 >gi|121728973|ref|ZP_01681977.1| GTP-binding protein Era [Vibrio cholerae V52] gi|147674346|ref|YP_001217962.1| GTP-binding protein Era [Vibrio cholerae O395] gi|262167291|ref|ZP_06035001.1| GTP-binding protein Era [Vibrio cholerae RC27] gi|121628739|gb|EAX61206.1| GTP-binding protein Era [Vibrio cholerae V52] gi|146316229|gb|ABQ20768.1| GTP-binding protein Era [Vibrio cholerae O395] gi|227014352|gb|ACP10562.1| GTP-binding protein Era [Vibrio cholerae O395] gi|262024266|gb|EEY42957.1| GTP-binding protein Era [Vibrio cholerae RC27] Length = 324 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V D VD Sbjct: 33 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETD------GNYQAIYVDT 85 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V +++ H D+ VF+ L K Sbjct: 86 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVLFVVEGTH-WTADDEMVFNKLQKANF 139 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + +++P S+ + K +VL+K + + + Sbjct: 140 PVVLCVNKVDQVK--DRNEVMLHMLELSKR--MQFVDIVPISAKQGKNTDVLKKHVRDHL 195 >gi|147920219|ref|YP_686014.1| GTP-binding protein [uncultured methanogenic archaeon RC-I] gi|110621410|emb|CAJ36688.1| conserved GTP-binding protein [uncultured methanogenic archaeon RC-I] Length = 220 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 29/205 (14%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P EI F GRSNVGKS+++ L+ K + PG TQ N++ D Sbjct: 8 SFEPVKAKYEIVFIGRSNVGKSTIMRELIGAK--VKVGRRPGVTQKPNYYQFGD------ 59 Query: 82 NLPAMALVDMPGYGYAR-APKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-------- 131 + + DMPGYGY + + + LIV+Y + ++ + C ++D + Sbjct: 60 ----LLITDMPGYGYMKGVDRAKQERVKDLIVKYFEDNASRIICAVQVVDAKAFAEIVDR 115 Query: 132 ---HGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH--- 185 G ID ++ FL + + + K+DK+ P+ E L+ + P + Sbjct: 116 WDGRGEIPIDIELNDFLYDLDLDVIVAVNKMDKIHPSAWDEFLDGICDRLHMLPPWNQWI 175 Query: 186 PEVIPTSSVKRKGIEVLRKAILETI 210 +V P + K + VL K + E + Sbjct: 176 DKVAPIVAKKGD-VNVLGKLLRERL 199 >gi|311105363|ref|YP_003978216.1| GTP-binding protein EngA [Achromobacter xylosoxidans A8] gi|310760052|gb|ADP15501.1| GTP-binding protein EngA [Achromobacter xylosoxidans A8] Length = 450 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 76/180 (42%), Gaps = 11/180 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 ++A GR NVGKS+LIN L+ + + + PG T+ + + + Sbjct: 182 DHRIKLAIVGRPNVGKSTLINTLMGEERV-IAFDMPGTTRDAIEI------DFERDGRRY 234 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + V+ + +++ L V L++D + + + D + F+ Sbjct: 235 TLIDTAGLRKRGKVFEAVEKFS--VIKTLQAIEASNVVLLMLDAQTEISEQDAHIAGFVL 292 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + + K D L + + + +R + + S+++ +G++ L K+I Sbjct: 293 ETGRAVVVAINKWDGLDGEAKERIEREFQRKLR--FLSFARMHTISALRGQGVKPLLKSI 350 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 27/185 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L R A ++ G T+ + + + ++ Sbjct: 5 PVVALVGRPNVGKSTLFNRLT-RSRAALVADYSGLTRD------RHYGEGRVGEIPFIVI 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL---RCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ G L+ R + V L+D R G+ D ++ L Sbjct: 58 DTGGFEPVAKD-------GILLEMARQTRQAIAEADVVVFLVDARAGINAHDHEIAQLLR 110 Query: 147 KKA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 K + + K E + + + + P S+ GI L + Sbjct: 111 KSGQQRVLLAVNKA---------EGMGAGSAISEFHELGLGQPYPISAAHGDGIVDLIEL 161 Query: 206 ILETI 210 L+ + Sbjct: 162 ALQDL 166 >gi|260424846|ref|ZP_05733464.2| ribosome-associated GTPase EngA [Dialister invisus DSM 15470] gi|260403366|gb|EEW96913.1| ribosome-associated GTPase EngA [Dialister invisus DSM 15470] Length = 454 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 74/194 (38%), Gaps = 23/194 (11%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 ++ K P +A GR NVGKS++IN L +K ++ + PG T+ + Sbjct: 4 TSYVKVED--KMSKPLVAIVGRPNVGKSTIINGLA-QKRVSIVEDIPGVTRDRIY----- 55 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGV 134 +++ ++D G + + D I + + ++D R GV Sbjct: 56 -CDVRWLDREFTMIDTGGIEF----RDEADQISDGIRQQAQLAMEEADVILFVVDARVGV 110 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 ++ DQ + L + + + K+D S +T E Y + +P S+V Sbjct: 111 QEDDQTIAGMLRRTGKPVVLCVNKVD--SENQKMDTYE-------FYSLGIGDPMPVSAV 161 Query: 195 KRKGIEVLRKAILE 208 G L I E Sbjct: 162 NHLGFGDLLDKISE 175 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 71/182 (39%), Gaps = 11/182 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 A GR NVGKS+LIN L+ + + ++ G T+ S K Sbjct: 186 PDIIRTAIVGRPNVGKSTLINSLLGYER-SLVADEMGTTRDAV------DSVWKYKGKTF 238 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G + ++ + ++R + ++D + + D+ + ++ Sbjct: 239 ILVDTAGMRKKGKIDEPLEKYS--VIRSIRAIDNCDVAIFVLDANDMLTEQDKKIIGYIH 296 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPTSSVKRKGIEVLRKA 205 + +++ K D + P +E + + P A + ++ S++ ++ I+ L Sbjct: 297 EAGKGLILMVNKWDMI-PKETNTMVELERQVRDGLPFAPYIPMLFGSALTKQRIQRLGDM 355 Query: 206 IL 207 I Sbjct: 356 IY 357 >gi|239831251|ref|ZP_04679580.1| small GTP-binding protein [Ochrobactrum intermedium LMG 3301] gi|239823518|gb|EEQ95086.1| small GTP-binding protein [Ochrobactrum intermedium LMG 3301] Length = 489 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 11 VAIVGRPNVGKSTLFNRLVGRK-LALVDDLPGVTRDRRIHDAKLYDL------KFQVIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + + + ++D ++G+ D + + Sbjct: 64 AGLEEAANDSLEA----RMRAQTEAAIQEADVILFVVDAKNGLTPTDSTFAEVVRRSGKP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + E P S+ +G+ LR AI+E + Sbjct: 120 VVLVANKA---------EARGAQSGMYDAFQLGLGEPCPISAEHGQGMPDLRDAIVELLG 170 Score = 98.7 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 69/185 (37%), Gaps = 13/185 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P IA GR N GKS+LIN ++ L T G T+ + + + Sbjct: 215 TKPMRIAIVGRPNAGKSTLINTMLGEDRL-LTGPEAGITRDSI------SVDWEWRDRKI 267 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L D G ++ ++ + L V +++D ++ D + + Sbjct: 268 KLFDTAGLRRKSRVQEKLEKLS--VADGLRAIRFAEVVIIVLDATIPFEKQDLQIADLII 325 Query: 147 KKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 ++ + I K D + + EKT L+ +P S + +GI+ L + Sbjct: 326 REGRAPIIAFNKWDLIEDRQMVLADLYEKTARLLPQVRGLRA--VPISGERGQGIDKLME 383 Query: 205 AILET 209 +++T Sbjct: 384 NVVKT 388 >gi|167037775|ref|YP_001665353.1| GTP-binding protein Era [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039985|ref|YP_001662970.1| GTP-binding protein Era [Thermoanaerobacter sp. X514] gi|256751969|ref|ZP_05492839.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus CCSD1] gi|300914075|ref|ZP_07131391.1| GTP-binding protein Era [Thermoanaerobacter sp. X561] gi|307724692|ref|YP_003904443.1| GTP-binding protein Era [Thermoanaerobacter sp. X513] gi|320116190|ref|YP_004186349.1| GTP-binding protein Era [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226741400|sp|B0KA54|ERA_THEP3 RecName: Full=GTPase Era gi|226741401|sp|B0K708|ERA_THEPX RecName: Full=GTPase Era gi|166854225|gb|ABY92634.1| GTP-binding protein Era [Thermoanaerobacter sp. X514] gi|166856609|gb|ABY95017.1| GTP-binding protein Era [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749174|gb|EEU62208.1| GTP-binding protein Era [Thermoanaerobacter ethanolicus CCSD1] gi|300889010|gb|EFK84156.1| GTP-binding protein Era [Thermoanaerobacter sp. X561] gi|307581753|gb|ADN55152.1| GTP-binding protein Era [Thermoanaerobacter sp. X513] gi|319929281|gb|ADV79966.1| GTP-binding protein Era [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 302 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N ++ K +A TS P T++ + L + + VD Sbjct: 8 VALVGRTNVGKSTLLNAILQEK-IAITSPKPQTTRNTIRGI------LTTDEYQVIFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + +I + + +I+ V D+ + L + Sbjct: 61 PGI---HKPKSKLSEF--MIEVAKRTLKEVDLILYMIEPDTEVGPGDRYIIEHLKEVDTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + +ET++ K +V+ S+++ K I++L++ I+ + Sbjct: 116 VILVVNKIDLVPEKRVEETIKIFKEQ-----YEFKDVVAISAIENKNIDLLKEKIVSLL 169 >gi|229096095|ref|ZP_04227068.1| GTP-binding protein engA [Bacillus cereus Rock3-29] gi|229102207|ref|ZP_04232916.1| GTP-binding protein engA [Bacillus cereus Rock3-28] gi|229115051|ref|ZP_04244461.1| GTP-binding protein engA [Bacillus cereus Rock1-3] gi|228668191|gb|EEL23623.1| GTP-binding protein engA [Bacillus cereus Rock1-3] gi|228681108|gb|EEL35276.1| GTP-binding protein engA [Bacillus cereus Rock3-28] gi|228687055|gb|EEL40960.1| GTP-binding protein engA [Bacillus cereus Rock3-29] Length = 436 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DDETIRFSLIGRPNVGKSSLVNALLGQERV-IVSNIAGTTRDAV------DTPYSKDGQD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ +K + L Sbjct: 283 HDSGRAVIIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLDYAPIVFLSAKTKKRTQTLL 340 Query: 204 KAILE 208 I E Sbjct: 341 PVINE 345 Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGITRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S G+ L Sbjct: 112 KPIVLAVNKVD---------NPEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDE 158 >gi|227513321|ref|ZP_03943370.1| GTP-binding protein EngA [Lactobacillus buchneri ATCC 11577] gi|227083194|gb|EEI18506.1| GTP-binding protein EngA [Lactobacillus buchneri ATCC 11577] Length = 435 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 14/189 (7%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G +P + GR NVGKSSL+N ++ + S+ G T+ + Sbjct: 166 ETGNVPNDDI-RFSIIGRPNVGKSSLVNAILGENRV-IVSDVAGTTRDAI------DTRF 217 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + + +VD G +N + + + R + + +I+ G+++ D+ Sbjct: 218 EADNIKFTMVDTAGIRKRGKVYENTERYSVM--RAMKAIDQSDVILFVINAEEGIREQDK 275 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRK 197 V + + + V+ K D L T T + + LIRN A+ +I S+ ++ Sbjct: 276 KVAGYAHEAGKAIITVVNKWDTLKKT--NHTQQDFETLIRNEFQYMAYSPIIFVSAKTKQ 333 Query: 198 GIEVLRKAI 206 IE L I Sbjct: 334 RIEQLPALI 342 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 21/181 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +AF GR NVGKS++ N + ++ + PG T+ + + +N A+ Sbjct: 3 MPTVAFIGRPNVGKSTIFNRIAG-DRISIVEDTPGVTRDRIYTHAEWLAN------EFAM 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + AP I + ++ + G+ D+ V L + Sbjct: 56 IDTGGIQISDAPFNTQIKNQAEI-----AIEEADVIVFIVSAKEGLTSDDEQVAKILYRS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K D + + + Y + +P S V GI L I+E Sbjct: 111 DKPVVLAVNKAD---------NPDAREDIYDFYALGFGDPMPISGVHGTGIGDLLDKIVE 161 Query: 209 T 209 Sbjct: 162 K 162 >gi|261880032|ref|ZP_06006459.1| ribosome-associated GTPase EngA [Prevotella bergensis DSM 17361] gi|270333272|gb|EFA44058.1| ribosome-associated GTPase EngA [Prevotella bergensis DSM 17361] Length = 437 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 70/188 (37%), Gaps = 19/188 (10%) Query: 21 IGLLPKAGP-------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP P A GR N GKSSL+N + + G T+ + Sbjct: 160 VKTLPSDNEEEIEEEIPRFAVVGRPNAGKSSLVNAFIGEDR-HIVTEIAGTTRDSIYTRF 218 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F LVD G ++++ + + R + L+ID G Sbjct: 219 DKFG------FDFYLVDTAGIRRKNKVTEDLEFYSVM--RSIRAIENSDVCILMIDATRG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPT 191 ++ D ++F + + S +V+ K D + + ++ + IR P + +I Sbjct: 271 IEAQDMNIFQLIQRNRKSLVVVVNKWDLVEDKD-HQVVKTFENAIRERMSPFSDFPIIFA 329 Query: 192 SSVKRKGI 199 S++ ++ I Sbjct: 330 SALTKQRI 337 Score = 95.2 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L R A S+ G T+ + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-RTRHAIVSDIAGTTRDRQY------GKCNWNGREFSIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K + D + I + + + L+D G+ D+DV L Sbjct: 58 GG----WVVKSD-DIFEDAIRQQVRIASDEADLILFLVDVETGLTDWDEDVAMVLRCSRK 112 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D + A + E K + + + S++ G L +++T+ Sbjct: 113 PIILVANKVD--NSGEAYISAEFYKLGL-------GDPVSISAISGSGTGDLLDLVVKTL 163 >gi|228990617|ref|ZP_04150582.1| GTP-binding protein engA [Bacillus pseudomycoides DSM 12442] gi|228996716|ref|ZP_04156353.1| GTP-binding protein engA [Bacillus mycoides Rock3-17] gi|228763035|gb|EEM11945.1| GTP-binding protein engA [Bacillus mycoides Rock3-17] gi|228769143|gb|EEM17741.1| GTP-binding protein engA [Bacillus pseudomycoides DSM 12442] Length = 436 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DDETIRFSLIGRPNVGKSSLVNALLGQERV-IVSNVAGTTRDAV------DTPYSKDGQD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ +K + L Sbjct: 283 HDSGRAVIIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLDYAPIVFLSAKTKKRTQTLL 340 Query: 204 KAILE 208 I E Sbjct: 341 PVINE 345 Score = 94.8 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGVTRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S G+ L Sbjct: 112 KPVVLAVNKVD---------NPEMRNDIYDFYALGFGEPFPISGTHGLGLGDLLDE 158 >gi|308176963|ref|YP_003916369.1| GTP-binding protein EngA [Arthrobacter arilaitensis Re117] gi|307744426|emb|CBT75398.1| GTP-binding protein EngA [Arthrobacter arilaitensis Re117] Length = 510 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 23/183 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 PP +A GR NVGKS+L+N ++ R+ A + PG T+ + + + Sbjct: 72 PPVLAVIGRPNVGKSTLVNRILGRRE-AVVEDTPGVTRDRVSYSAEWMG------RPFTI 124 Query: 89 VDMPGYGY-ARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 VD G+ + A+ +V + + ++D G D+ V L K Sbjct: 125 VDTGGWEHDAKGIHASVADQAEI------AADVADAILFVVDSHVGATATDEAVVKMLRK 178 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 K +V K+D + L + + P S++ +G L A++ Sbjct: 179 KGKPVFLVANKVDDFNQEAEAAVL---------WGLGFGQPWPVSALHGRGTADLLDAVM 229 Query: 208 ETI 210 E + Sbjct: 230 EKL 232 Score = 87.9 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 69/190 (36%), Gaps = 11/190 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G++P GP +A GR NVGKSSL+N + + + G T+ + L Sbjct: 240 GMIPSGGPRRVALIGRPNVGKSSLLNKVAGSERVV-VDEYAGTTRDP----VDELVELGG 294 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 + VD G + D + L + E++ +L+ + + D + Sbjct: 295 EI--WRFVDTAGIRRRQHMAVGSDYYASLRTQTALEKAE--VAVILLAANEIISEQDVRI 350 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEV 201 + + IV K D++ + L++ + P V S+ + Sbjct: 351 IQLAIEAGRAMVIVYNKWDEV-DEDRRYYLDQEIERDLAHIEWAPRV-NISAKTGWHKDK 408 Query: 202 LRKAILETIN 211 L A+ ++ Sbjct: 409 LVPALNTALD 418 >gi|312110436|ref|YP_003988752.1| ribosome-associated GTPase EngA [Geobacillus sp. Y4.1MC1] gi|311215537|gb|ADP74141.1| ribosome-associated GTPase EngA [Geobacillus sp. Y4.1MC1] Length = 436 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 71/180 (39%), Gaps = 13/180 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + + GR NVGKSSL+N ++ + + S+ G T+ + Sbjct: 172 EEDVIKFCLIGRPNVGKSSLVNAILGEERV-IVSDIAGTTRDAV------DTTFVREGQE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G +N + + L R L V ++++ G+ + D+ + + Sbjct: 225 YVIIDTAGMRKRGKIYENTEKYSVL--RALKAIERSDVVLVVLNAEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +TL + + IRN+ + +I S+ ++ + L Sbjct: 283 HEAGRGVIIVVNKWDAIEKDD--KTLIEFERKIRNHFPFLDYAPIIFVSAKTKQRLHKLL 340 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + ++ N K L+ Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-ISIVEDVPGVTRDRI-YSSAEWLNHK-----FYLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P I + + + R GV D++V L + Sbjct: 57 DTGGIDIGDEPLLVQIRQQAEI-----AIDEADVIIFMTNGRDGVTAADEEVAKILHRSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + KID E + Y + P S G+ L A+ Sbjct: 112 KPVVLAVNKID---------NPEMRDLIYDFYALGFGDPYPISGAHGTGLGDLLDAVA 160 >gi|56459917|ref|YP_155198.1| GTPase Era [Idiomarina loihiensis L2TR] gi|56178927|gb|AAV81649.1| GTPase Era [Idiomarina loihiensis L2TR] Length = 305 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 16/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ +K ++ TSN P T+H V D + VD Sbjct: 16 VAIVGRPNVGKSTLINRLLGQK-ISITSNKPQTTRHRILGVDTD------DGCQAIYVDT 68 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG ++ + S + V +++ + D+ V + + V Sbjct: 69 PGMHK----QEPRAINRVMNQTASSALKDVDLVLFVVE-NLKWLEDDKMVLEKIQRSKVP 123 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +++ K+D+L L ++L + ++P S+ ++ LRK + Sbjct: 124 VVLLVNKVDQLKDKER--LLPHLQWLNEQHK--FDAILPISATHGDNVDELRKIV 174 >gi|304382194|ref|ZP_07364702.1| ribosome-associated GTPase EngA [Prevotella marshii DSM 16973] gi|304336659|gb|EFM02887.1| ribosome-associated GTPase EngA [Prevotella marshii DSM 16973] Length = 437 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 69/176 (39%), Gaps = 12/176 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G P A GR N GKSS+IN + + G T+ + F Sbjct: 172 EDGIPRFAVVGRPNAGKSSIINAFIGEDRN-IVTEIAGTTRDSIYTRYDKFG------FD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D G++ D ++F + Sbjct: 225 FYLVDTAGIRRKNKVTEDLEFYSVM--RSIRAIENSDVCILMLDATRGIEAQDMNIFQLI 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI 199 K + S +V+ K D + + ++ + IR P +I S++ ++ I Sbjct: 283 QKNSKSLVVVVNKWDLVENKDT-KVIKTFENAIRERMAPFTDFPIIFASALTKQRI 337 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 63/179 (35%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A S+ G T+ + + N ++VD Sbjct: 5 VAIVGRPNVGKSTLFNRLT-KSRRAIVSDEAGTTRDRQY------GKCEWNGREFSVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ +IV V L+D +G+ D+DV L + + Sbjct: 58 GGWVVNSDDIFEDAIRKQVIVAT----EEADLVLFLVDITNGLTDWDEDVAKILRRAKLP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D + E+ Y + S+ G L +L+ + Sbjct: 114 VILVANKAD---------SNEQIYDAAEFYRLGLGDPYCISAATGSGTGDLLDFVLQKM 163 >gi|299769158|ref|YP_003731184.1| GTP-binding protein Era [Acinetobacter sp. DR1] gi|298699246|gb|ADI89811.1| GTP-binding protein Era [Acinetobacter sp. DR1] Length = 342 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K L+ TS P T+H + VD Sbjct: 42 VAIVGRPNVGKSTLMNHLLGQK-LSITSRKPQTTRHKIIGIDS------REKMQAVYVDT 94 Query: 92 PGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG KK V + ++ R S + V +ID + Q D V L + Sbjct: 95 PGMH-----KKEVRAINKMMNRAAHSALRDVNLVLFVIDA-YKWTQNDDLVLEKLKNAEM 148 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K D L + + + N+ E++P S+++ +E L + I + + Sbjct: 149 PVILVINKADTFEDKRDILPLIQERAKLMNFA----EIVPVSALRGANLEHLSETIEKYL 204 Query: 211 NY 212 Y Sbjct: 205 PY 206 >gi|56751772|ref|YP_172473.1| GTP-binding protein EngA [Synechococcus elongatus PCC 6301] gi|81301149|ref|YP_401357.1| GTP-binding protein EngA [Synechococcus elongatus PCC 7942] gi|81820595|sp|Q5N167|DER_SYNP6 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123556312|sp|Q31KP9|DER_SYNE7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|56686731|dbj|BAD79953.1| GTP-binding protein engA [Synechococcus elongatus PCC 6301] gi|81170030|gb|ABB58370.1| Small GTP-binding protein domain [Synechococcus elongatus PCC 7942] Length = 453 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 17/182 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N + + A S G T+ + ++ N LVD Sbjct: 180 VAIVGRPNVGKSSLLNSFLGEQR-AIVSPIAGTTRDAI------DTVIERNDQRYRLVDT 232 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R + +G I R L+ID GV DQ + +++ + Sbjct: 233 AGIRRKRGVDYGPEFFG--INRSFKAIRRADVCLLVIDVLDGVTDQDQKLAGRIEEDGRA 290 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLRKAILET 209 IV+ K D + T+ + + +R+ Y +I S++ + +E IL+ Sbjct: 291 CVIVVNKWD--AHEKDSSTIYEVERQLRDRLYFLDWAPMIFVSALTGQRVEK----ILDQ 344 Query: 210 IN 211 +N Sbjct: 345 VN 346 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A + PG T+ + + + Sbjct: 3 LPIVAILGRPNVGKSTLVNRLAGSRE-AIVHDEPGVTRD------RTYQEAFWCDRDFTV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + + L++D + G+ D ++ +L + Sbjct: 56 VDTGGLVF----DDDTEFLPLIREQAELALAEAALAVLVVDGQAGLTAADNEIADWLRHQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K + AQ + E +P SS+ G L +LE Sbjct: 112 NRPIVVAVNKCESPDKGAAQAA--------EFWSLGFGEPLPISSIHGSGTGELLDRVLE 163 Query: 209 TI 210 + Sbjct: 164 LL 165 >gi|15889576|ref|NP_355257.1| GTP-binding protein EngA [Agrobacterium tumefaciens str. C58] gi|26006719|sp|Q8UD28|DER_AGRT5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|15157462|gb|AAK88042.1| GTP-binding protein [Agrobacterium tumefaciens str. C58] Length = 476 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 63/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ + K ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGDAKLIDLRFTIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + W + +ID + G+ D+ + L ++ Sbjct: 58 AGLEQSGPETLQGRMWAQTE----AAIDEADVTLFVIDAKAGLTPADETLGEMLRRRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + E P S+ +G+ LR AI+E I Sbjct: 114 VVLVANKS---------EARGSDAGFYDAFTLGLGEPCPVSAEHGQGMIDLRDAIVEAIG 164 Score = 92.5 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 9/183 (4%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P +A GR N GKS+LIN + L T G T+ V D+ + Sbjct: 202 TKPLRVAIIGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSIS-VEWDWRG-----RTI 254 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 + D G + ++ + L V ++ D ++ D + + Sbjct: 255 KMFDTAGMRRKAKVTEKLEKLS--VADSLRSIRFAETVVIVFDSTIPFEKQDLQLVDLVI 312 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ + + K D + A + K +P S G++ L ++I Sbjct: 313 REGRAAVLAFNKWDLVEDPQAYLADLREKTERLLPQARGIRAVPMSGQTGYGLDRLMQSI 372 Query: 207 LET 209 ++T Sbjct: 373 IDT 375 >gi|330999189|ref|ZP_08322908.1| ribosome biogenesis GTPase Era [Parasutterella excrementihominis YIT 11859] gi|329575389|gb|EGG56933.1| ribosome biogenesis GTPase Era [Parasutterella excrementihominis YIT 11859] Length = 303 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN LV K ++ TS P T+ V L + VD Sbjct: 18 VAVIGRPNVGKSTLINALVGEK-VSITSKKPQTTRDRIMGV------LTTDNAQYLFVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG+ + + + + L S + V ++I+ G + DQ V + L K A + Sbjct: 71 PGF-QTKHSSELLARMNQSVRSSL---SDVDAVVMVIEAT-GWRPEDQVVLNLLSKDAKN 125 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K D++ + A L K + +P +V+P S+ K + ++VL I + + Sbjct: 126 VILAINKTDEVKESEAM--LPLIKEAMEKFP--FADVVPVSAEKTRQLDVLLDVIRKYL 180 >gi|269926863|ref|YP_003323486.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798] gi|269790523|gb|ACZ42664.1| small GTP-binding protein [Thermobaculum terrenum ATCC BAA-798] Length = 448 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 18/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+ N L+ + A + PG T+ + + +V Sbjct: 5 PIVAIVGRPNVGKSTFFNRLLGERA-AIVQDEPGTTRDRLY------GEVSWRGRTFTIV 57 Query: 90 DMPGYGYA-RAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D G + + D ++ + + +ID + G D ++ L + Sbjct: 58 DTGGLETSVDSSSDEPDPIRRMVREQAEQAIREADLIVFMIDVKTGPTPSDYEIADLLRR 117 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K D + Q E ++ Y + IP S+ GI L ++ Sbjct: 118 TNKPTILAVNKAD-----SPQREYEAVEF----YSLGMGDPIPVSAYHGMGITPLLDRVV 168 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 69/177 (38%), Gaps = 9/177 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS L+N ++ ++ A S+ PG T+ + ++ + L+D Sbjct: 188 IAIVGRPNVGKSRLLNAILGQER-AIVSDVPGTTRDPV------DTEIQWGDQRIVLIDT 240 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + R L V LLID + G+ D+ + ++ ++ Sbjct: 241 AGIRRRGKVESGIEQYSVF--RTLRAIGRSDVVLLLIDAQEGLTAQDEHIAGYVLEEYKG 298 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K D + R V S+ +GI L + L+ Sbjct: 299 LVLVVNKWDLVEKDENTANEYVAHLRERMPFVDWAPVRFISAKYSQGIPGLVETALK 355 >gi|307718259|ref|YP_003873791.1| GTP-binding protein [Spirochaeta thermophila DSM 6192] gi|306531984|gb|ADN01518.1| GTP-binding protein [Spirochaeta thermophila DSM 6192] Length = 290 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 18/177 (10%) Query: 33 AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMP 92 A GR + GKS+L+N L RK +A TS P T++ + + + +D P Sbjct: 7 AIVGRPSSGKSTLLNTLCGRK-VAITSPVPQTTRNRIRGIVTE------ERGQIVFIDTP 59 Query: 93 GYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSY 152 GY L + + + + L+D + + + ++ + + Sbjct: 60 GYHQ-----SEKKFNLFLKEQVIEALKEVDEILYLVDSTRSIGEEEHELIELVKQAGKPV 114 Query: 153 QIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I L KID + E L++ + + P ++ S+ +G+E L+ + E Sbjct: 115 VIALNKID-----IPEHHAEGMVPLLKAHFPSAP-IVKISAYTGEGLEDLKARLFEA 165 >gi|289433056|ref|YP_003462929.1| ribosome-associated GTPase EngA [Dehalococcoides sp. GT] gi|288946776|gb|ADC74473.1| ribosome-associated GTPase EngA [Dehalococcoides sp. GT] Length = 442 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 65/185 (35%), Gaps = 20/185 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA GR NVGKS+L+N L KNLA T + PG T+ F Sbjct: 3 NTTTPIIAIVGRQNVGKSTLLNRLA-HKNLAITEDLPGTTRDRLFATVSWLD------RR 55 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + +VD G ++V I L V L++D + G+ D ++ + Sbjct: 56 LIMVDTGGLDPDI---ESVIGQQVNIQISL-AIKEADLVLLVVDVKDGLITPDYEMADII 111 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V K D L Y E S+ GI L Sbjct: 112 RRTGKPVILVANKADNLKMGQ---------EATEFYSLGFGEPAVISAFHGTGISDLMDR 162 Query: 206 ILETI 210 +LE + Sbjct: 163 VLEEL 167 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 69/177 (38%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++A GR+NVGKS+L+N + + + SN PG T+ + L + Sbjct: 177 EDTSVKLALVGRTNVGKSTLLNTFLGEER-SVVSNIPGTTRDAI------DTPLDFDGTN 229 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G + V+ + L R L V L++D V D + ++ Sbjct: 230 VLLIDTAGIRRRGKVESGVEKYSVL--RALKAIDRADVVLLVMDTEELVTAQDTHIAGYV 287 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 A I+L K D E + + + A ++ S +G++ + Sbjct: 288 RDTAKGIIIILNKWDLGKGQDKAEVTQTIQSRFKFLDYA--PILFVSGKTGRGVDTI 342 >gi|224158020|ref|XP_002337923.1| predicted protein [Populus trichocarpa] gi|222870018|gb|EEF07149.1| predicted protein [Populus trichocarpa] Length = 206 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 13/95 (13%) Query: 7 FTKSAWI----FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAP 62 + ++A + F++ P G PE A GRSNVGKSSL+N LV RK LA TS P Sbjct: 102 YARNAQVVQAEFIKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKP 161 Query: 63 GRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYA 97 G+TQ +N F D + LVD+PGYGY Sbjct: 162 GKTQCINHFKVND---------SWYLVDLPGYGYG 187 >gi|62289366|ref|YP_221159.1| GTP-binding protein EngA [Brucella abortus bv. 1 str. 9-941] gi|82699291|ref|YP_413865.1| GTP-binding protein EngA [Brucella melitensis biovar Abortus 2308] gi|189023620|ref|YP_001934388.1| GTP-binding protein EngA [Brucella abortus S19] gi|237814855|ref|ZP_04593853.1| small GTP-binding protein [Brucella abortus str. 2308 A] gi|254688683|ref|ZP_05151937.1| GTP-binding protein EngA [Brucella abortus bv. 6 str. 870] gi|254696810|ref|ZP_05158638.1| GTP-binding protein EngA [Brucella abortus bv. 2 str. 86/8/59] gi|254729717|ref|ZP_05188295.1| GTP-binding protein EngA [Brucella abortus bv. 4 str. 292] gi|256256930|ref|ZP_05462466.1| GTP-binding protein EngA [Brucella abortus bv. 9 str. C68] gi|260545880|ref|ZP_05821621.1| GTP-binding protein engA [Brucella abortus NCTC 8038] gi|260754159|ref|ZP_05866507.1| GTP-binding protein engA [Brucella abortus bv. 6 str. 870] gi|260757379|ref|ZP_05869727.1| GTP-binding protein engA [Brucella abortus bv. 4 str. 292] gi|260761203|ref|ZP_05873546.1| GTP-binding protein engA [Brucella abortus bv. 2 str. 86/8/59] gi|260883184|ref|ZP_05894798.1| GTP-binding protein engA [Brucella abortus bv. 9 str. C68] gi|297247781|ref|ZP_06931499.1| ribosome-associated GTPase EngA [Brucella abortus bv. 5 str. B3196] gi|75505338|sp|Q57EY6|DER_BRUAB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123546332|sp|Q2YM98|DER_BRUA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|238691492|sp|B2S9M3|DER_BRUA1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|62195498|gb|AAX73798.1| GTP-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82615392|emb|CAJ10361.1| Uridine kinase:ATP/GTP-binding site motif A (P-loop):Ras GTPase superfamily:GTP-binding protein, HSR1-related:Small GTP-bindi [Brucella melitensis biovar Abortus 2308] gi|189019192|gb|ACD71914.1| GTP-binding protein EngA [Brucella abortus S19] gi|237789692|gb|EEP63902.1| small GTP-binding protein [Brucella abortus str. 2308 A] gi|260097287|gb|EEW81162.1| GTP-binding protein engA [Brucella abortus NCTC 8038] gi|260667697|gb|EEX54637.1| GTP-binding protein engA [Brucella abortus bv. 4 str. 292] gi|260671635|gb|EEX58456.1| GTP-binding protein engA [Brucella abortus bv. 2 str. 86/8/59] gi|260674267|gb|EEX61088.1| GTP-binding protein engA [Brucella abortus bv. 6 str. 870] gi|260872712|gb|EEX79781.1| GTP-binding protein engA [Brucella abortus bv. 9 str. C68] gi|297174950|gb|EFH34297.1| ribosome-associated GTPase EngA [Brucella abortus bv. 5 str. B3196] Length = 483 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 5 LAIVGRPNVGKSTLFNRLVGRK-LALVDDLPGVTRDRRIHDAKLYDL------KFQVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + + S V +ID + G+ D + + Sbjct: 58 AGLEEAANDSLEA----RMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + E P S+ +G+ LR AI+E + Sbjct: 114 VVLVANKA---------EARGSEAGMYDAFQLGLGEPCPISAEHGQGMPDLRDAIVELLG 164 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 13/194 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 EI P IA GR N GKS+LIN ++ L T G T+ + Sbjct: 200 AEEIPAYDATKPLRIAIVGRPNAGKSTLINTMLGEDRL-LTGPEAGITRDSI------SA 252 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + + + L D G ++ ++ + L V +++D ++ Sbjct: 253 DWEWHGRKINLFDTAGMRRKARVQEKLEKLS--VADSLRAIRFAEVVIIVLDATIPFEKQ 310 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + ++ + I K D + + EKT L+ +P S + Sbjct: 311 DLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTARLLPQVRGLRA--VPISGER 368 Query: 196 RKGIEVLRKAILET 209 +GI+ L + +++T Sbjct: 369 GQGIDKLMENVVKT 382 >gi|218290942|ref|ZP_03494999.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1] gi|218239107|gb|EED06310.1| small GTP-binding protein [Alicyclobacillus acidocaldarius LAA1] Length = 442 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 22/183 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR+NVGKS+L N LV R+ ++ + PG T+ + + N + Sbjct: 3 LPVVAIVGRANVGKSTLFNRLVGRR-VSIVEDTPGVTRDRIY------GKSEWNGVPFRV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLI-VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G D G LI V+ + ++D R GV Q D+ V L + Sbjct: 56 IDTGGIEM-----DEEDEIGNLIRVQAQIAIDEADVILFVVDGRQGVTQADEHVAQVLRR 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D +E+ Y E IP S+ +G L A++ Sbjct: 111 AHKPVVLGVNKLD---------HVEQHALSYEFYRLGFGEPIPFSAEHGRGTGDLLDAVV 161 Query: 208 ETI 210 + Sbjct: 162 AAL 164 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 9/187 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 IAF GR NVGKSSL+N L+ + + S G T+ + L+ + + Sbjct: 173 DEDAIRIAFIGRPNVGKSSLVNRLLGEERVM-VSPVAGTTRDAV------DTPLERDGQS 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G + ++ + L R L ++++D + G+ + D+ V + Sbjct: 226 YVLVDTAGMRRKGKVYERIEKYSVL--RALRALDRADVAFVVLDAQTGIVEQDKRVAGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + V+ K D + + K VI S++ + + L Sbjct: 284 LDAGCAIAFVVNKWDAIEKDDKTAHRFEEKIRDEFPFLRFAPVIFVSALTGQRVGRLLDV 343 Query: 206 ILETINY 212 E Y Sbjct: 344 AKEIAEY 350 >gi|23501279|ref|NP_697406.1| GTP-binding protein EngA [Brucella suis 1330] gi|161618354|ref|YP_001592241.1| GTP-binding protein EngA [Brucella canis ATCC 23365] gi|225626893|ref|ZP_03784932.1| small GTP-binding protein [Brucella ceti str. Cudo] gi|254703735|ref|ZP_05165563.1| GTP-binding protein EngA [Brucella suis bv. 3 str. 686] gi|254707885|ref|ZP_05169713.1| GTP-binding protein EngA [Brucella pinnipedialis M163/99/10] gi|254709531|ref|ZP_05171342.1| GTP-binding protein EngA [Brucella pinnipedialis B2/94] gi|254713052|ref|ZP_05174863.1| GTP-binding protein EngA [Brucella ceti M644/93/1] gi|254716595|ref|ZP_05178406.1| GTP-binding protein EngA [Brucella ceti M13/05/1] gi|254718562|ref|ZP_05180373.1| GTP-binding protein EngA [Brucella sp. 83/13] gi|256031025|ref|ZP_05444639.1| GTP-binding protein EngA [Brucella pinnipedialis M292/94/1] gi|256060517|ref|ZP_05450686.1| GTP-binding protein EngA [Brucella neotomae 5K33] gi|256159079|ref|ZP_05456908.1| GTP-binding protein EngA [Brucella ceti M490/95/1] gi|256254428|ref|ZP_05459964.1| GTP-binding protein EngA [Brucella ceti B1/94] gi|256368832|ref|YP_003106338.1| GTP-binding protein EngA [Brucella microti CCM 4915] gi|260168157|ref|ZP_05754968.1| GTP-binding protein EngA [Brucella sp. F5/99] gi|260567011|ref|ZP_05837481.1| GTP-binding protein engA [Brucella suis bv. 4 str. 40] gi|261218394|ref|ZP_05932675.1| GTP-binding protein engA [Brucella ceti M13/05/1] gi|261221596|ref|ZP_05935877.1| GTP-binding protein engA [Brucella ceti B1/94] gi|261315376|ref|ZP_05954573.1| GTP-binding protein engA [Brucella pinnipedialis M163/99/10] gi|261317057|ref|ZP_05956254.1| GTP-binding protein engA [Brucella pinnipedialis B2/94] gi|261320757|ref|ZP_05959954.1| GTP-binding protein engA [Brucella ceti M644/93/1] gi|261324511|ref|ZP_05963708.1| GTP-binding protein engA [Brucella neotomae 5K33] gi|261754380|ref|ZP_05998089.1| GTP-binding protein engA [Brucella suis bv. 3 str. 686] gi|261757615|ref|ZP_06001324.1| GTP-binding protein engA [Brucella sp. F5/99] gi|265983537|ref|ZP_06096272.1| GTP-binding protein engA [Brucella sp. 83/13] gi|265988095|ref|ZP_06100652.1| GTP-binding protein engA [Brucella pinnipedialis M292/94/1] gi|265997559|ref|ZP_06110116.1| GTP-binding protein engA [Brucella ceti M490/95/1] gi|294851760|ref|ZP_06792433.1| ribosome-associated GTPase EngA [Brucella sp. NVSL 07-0026] gi|306837298|ref|ZP_07470181.1| small GTP-binding protein [Brucella sp. NF 2653] gi|306845011|ref|ZP_07477592.1| small GTP-binding protein [Brucella sp. BO1] gi|37999701|sp|Q8G2E8|DER_BRUSU RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|189037138|sp|A9M8F4|DER_BRUC2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|23347166|gb|AAN29321.1| GTP-binding protein [Brucella suis 1330] gi|161335165|gb|ABX61470.1| small GTP-binding protein domain [Brucella canis ATCC 23365] gi|225618550|gb|EEH15593.1| small GTP-binding protein [Brucella ceti str. Cudo] gi|255998990|gb|ACU47389.1| GTP-binding protein EngA [Brucella microti CCM 4915] gi|260156529|gb|EEW91609.1| GTP-binding protein engA [Brucella suis bv. 4 str. 40] gi|260920180|gb|EEX86833.1| GTP-binding protein engA [Brucella ceti B1/94] gi|260923483|gb|EEX90051.1| GTP-binding protein engA [Brucella ceti M13/05/1] gi|261293447|gb|EEX96943.1| GTP-binding protein engA [Brucella ceti M644/93/1] gi|261296280|gb|EEX99776.1| GTP-binding protein engA [Brucella pinnipedialis B2/94] gi|261300491|gb|EEY03988.1| GTP-binding protein engA [Brucella neotomae 5K33] gi|261304402|gb|EEY07899.1| GTP-binding protein engA [Brucella pinnipedialis M163/99/10] gi|261737599|gb|EEY25595.1| GTP-binding protein engA [Brucella sp. F5/99] gi|261744133|gb|EEY32059.1| GTP-binding protein engA [Brucella suis bv. 3 str. 686] gi|262552027|gb|EEZ08017.1| GTP-binding protein engA [Brucella ceti M490/95/1] gi|264660292|gb|EEZ30553.1| GTP-binding protein engA [Brucella pinnipedialis M292/94/1] gi|264662129|gb|EEZ32390.1| GTP-binding protein engA [Brucella sp. 83/13] gi|294820349|gb|EFG37348.1| ribosome-associated GTPase EngA [Brucella sp. NVSL 07-0026] gi|306274643|gb|EFM56432.1| small GTP-binding protein [Brucella sp. BO1] gi|306407611|gb|EFM63807.1| small GTP-binding protein [Brucella sp. NF 2653] Length = 483 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 5 LAIVGRPNVGKSTLFNRLVGRK-LALVDDLPGVTRDRRIHDAKLYDL------KFQVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + + S V +ID + G+ D + + Sbjct: 58 AGLEEAANDSLEA----RMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + E P S+ +G+ LR AI+E + Sbjct: 114 VVLVANKA---------EARGSEAGMYDAFQLGLGEPCPISAEHGQGMPDLRDAIVELLG 164 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 13/194 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 EI P IA GR N GKS+LIN ++ L T G T+ + Sbjct: 200 AEEIPAYDATKPLRIAIVGRPNAGKSTLINTMLGEDRL-LTGPEAGITRDSI------SA 252 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + + + L D G ++ ++ + L V +++D ++ Sbjct: 253 DWEWHGRKIKLFDTAGMRRKARVQEKLEKLS--VADGLRAIRFAEVVIIVLDATIPFEKQ 310 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + ++ + I K D + + EKT L+ +P S + Sbjct: 311 DLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTARLLPQVRGLRA--VPISGER 368 Query: 196 RKGIEVLRKAILET 209 +GI+ L + +++T Sbjct: 369 GQGIDKLMENVVKT 382 >gi|220931895|ref|YP_002508803.1| small GTP-binding protein [Halothermothrix orenii H 168] gi|254783157|sp|B8CWY9|DER_HALOH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|219993205|gb|ACL69808.1| small GTP-binding protein [Halothermothrix orenii H 168] Length = 438 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 78/188 (41%), Gaps = 13/188 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++A G+ NVGKSSL+N +V ++ + S+ PG T+ + ++ N Sbjct: 174 DDDAIDVAIIGKPNVGKSSLVNYIVGQERV-IVSDIPGTTRDAI------DTLVEKNGHR 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+ + + L R + V ++ID GV + D+ + + Sbjct: 227 YNLIDTAGLRKKSRVKEATEYYSAL--RTIKAIDRSDGVIMMIDALEGVTEQDKKIAGYA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI--RNYPTAHPEVIPTSSVKRKGIEVLR 203 + + + + K D + T T+E K I + V S++ K ++ L Sbjct: 285 HEAGKAIVLAVNKWDLVEKDT--HTMENYKEEIYYNLKFLQYAPVTFISALTGKRVQELL 342 Query: 204 KAILETIN 211 K I ++ Sbjct: 343 KLIEYVVD 350 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 65/182 (35%), Gaps = 21/182 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + ++ P T+ + + +V Sbjct: 4 PVVAIVGRPNVGKSTLFNRLAGYR-ISIVEGEPNVTRDRIYADVNWLD------RSFIIV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G + D ++ + ++D R+G+ D++V +FL K Sbjct: 57 DTGGIDPY-----DRDQIKNMVKYQAQMAIDEASLILFVVDGRNGLTATDEEVAAFLRKS 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + Y ++IP S+ K L I+ Sbjct: 112 NKKVILVVNKVDDFKNME--------EDCWEFYTLGFDKLIPISAEHGKNTGDLLDEIVN 163 Query: 209 TI 210 + Sbjct: 164 ML 165 >gi|229004376|ref|ZP_04162143.1| GTP-binding protein engA [Bacillus mycoides Rock1-4] gi|228756874|gb|EEM06152.1| GTP-binding protein engA [Bacillus mycoides Rock1-4] Length = 368 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 104 DDETIRFSLIGRPNVGKSSLVNALLGQERV-IVSNVAGTTRDAV------DTPYSKDGQD 156 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 157 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 214 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ +K + L Sbjct: 215 HDSGRAVIIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLDYAPIVFLSAKTKKRTQTLL 272 Query: 204 KAILE 208 I E Sbjct: 273 PVINE 277 Score = 42.4 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 9/87 (10%) Query: 119 STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + + + R GV D++V L + + + K+D E + Sbjct: 13 DEADVIIFMTNGRDGVTAADEEVAKILYRSKKPVVLAVNKVD---------NPEMRNDIY 63 Query: 179 RNYPTAHPEVIPTSSVKRKGIEVLRKA 205 Y E P S G+ L Sbjct: 64 DFYALGFGEPFPISGTHGLGLGDLLDE 90 >gi|218896533|ref|YP_002444944.1| ribosome-associated GTPase EngA [Bacillus cereus G9842] gi|228900184|ref|ZP_04064416.1| GTP-binding protein engA [Bacillus thuringiensis IBL 4222] gi|228938715|ref|ZP_04101319.1| GTP-binding protein engA [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228964578|ref|ZP_04125687.1| GTP-binding protein engA [Bacillus thuringiensis serovar sotto str. T04001] gi|228971597|ref|ZP_04132220.1| GTP-binding protein engA [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978207|ref|ZP_04138584.1| GTP-binding protein engA [Bacillus thuringiensis Bt407] gi|226741129|sp|B7IP82|DER_BACC2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|218545843|gb|ACK98237.1| ribosome-associated GTPase EngA [Bacillus cereus G9842] gi|228781224|gb|EEM29425.1| GTP-binding protein engA [Bacillus thuringiensis Bt407] gi|228788120|gb|EEM36076.1| GTP-binding protein engA [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228795112|gb|EEM42609.1| GTP-binding protein engA [Bacillus thuringiensis serovar sotto str. T04001] gi|228820956|gb|EEM66977.1| GTP-binding protein engA [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228859454|gb|EEN03882.1| GTP-binding protein engA [Bacillus thuringiensis IBL 4222] gi|326939221|gb|AEA15117.1| GTP-binding protein EngA [Bacillus thuringiensis serovar chinensis CT-43] Length = 436 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DDETIRFSLIGRPNVGKSSLVNALLGQERV-IVSNIAGTTRDAV------DTPYSKDDQD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ +K + L Sbjct: 283 HDSGRAVIIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLDYAPIVFLSAKTKKRTQTLL 340 Query: 204 KAILE 208 I E Sbjct: 341 PVINE 345 Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGITRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S G+ L Sbjct: 112 KPIVLAVNKVD---------NPEMRSDIYDFYSLGFGEPFPISGTHGLGLGDLLDE 158 >gi|94311040|ref|YP_584250.1| GTP-binding protein EngA [Cupriavidus metallidurans CH34] gi|123383733|sp|Q1LLJ5|DER_RALME RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|93354892|gb|ABF08981.1| GTP-binding protein [Cupriavidus metallidurans CH34] Length = 447 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 73/179 (40%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + + PG T+ + + L+D Sbjct: 182 KIAIVGRPNVGKSTLVNTLIGEERV-IAFDMPGTTRDAIY------VEFERGGKPYTLID 234 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L + V LL+D + + + D + F+ + Sbjct: 235 TAGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISEQDAHIAGFIVESGR 292 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D L + ++ + + S+ +R GI L +++ + Sbjct: 293 ALVVGVNKWDGLDGHQRDRVKHDLERKLQ--FLSFANIHFVSARERTGIGALLRSVDDA 349 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 26/183 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + ++ A ++ PG T+ + + + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRMTRSRD-ALVADLPGLTRD------RHYGEGRIGDRPFIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS---TLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + R V L+D R G+ D+ + +L Sbjct: 56 DTGGFEPVAKEGIVAEMAK-------QTRQAVVEADVVIFLVDGRLGLAPQDRVIADYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + + K E ++ T Y + SS G+ L Sbjct: 109 KTGRRVMLAINKA---------EGMKYTSVAADFYELGMGDPYAISSTHGDGVRELVDEA 159 Query: 207 LET 209 L+ Sbjct: 160 LDL 162 >gi|260588686|ref|ZP_05854599.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583] gi|260541161|gb|EEX21730.1| ribosome-associated GTPase EngA [Blautia hansenii DSM 20583] Length = 441 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P+IA G+ NVGKSSLIN ++ + SN G T+ + + Sbjct: 174 EDEIPKIAVVGKPNVGKSSLINKILGEDRV-IVSNIAGTTRDAI------DTKVTYQGKE 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G K+ ++ + I+R ++ V ++ID GV + D + Sbjct: 227 YTFIDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVVMMIDATEGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 + I + K D + +T+ K +R + P E++ S+ + I L Sbjct: 285 HDRGKGVVIAVNKWDAIEKND--KTIYKFTNKVRETLSYMPYAEIMFISAHTGQRIPNLF 342 Query: 204 KAI 206 + I Sbjct: 343 ETI 345 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 19/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L K ++ + PG T+ + ++ Sbjct: 4 PIVAIVGRPNVGKSTLFNALAGEK-ISIVKDTPGVTRDRIYAEVTWLDK------TFTMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ N + + T + + D R G+ D V L + Sbjct: 57 DTGGI----EPESNDVILSQMREQAQIAIDTADVIIFMTDVRQGLVDADSKVADMLRRSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + Q+ + T Y E +P S+ G+ + + ++E Sbjct: 113 KPVVLVVNKVD-----SFQKFMMDTYEF---YNLGIGEPVPISAASMLGLGDMLEKVVEH 164 Query: 210 IN 211 + Sbjct: 165 FD 166 >gi|229016860|ref|ZP_04173788.1| GTP-binding protein engA [Bacillus cereus AH1273] gi|229023066|ref|ZP_04179580.1| GTP-binding protein engA [Bacillus cereus AH1272] gi|228738212|gb|EEL88694.1| GTP-binding protein engA [Bacillus cereus AH1272] gi|228744421|gb|EEL94495.1| GTP-binding protein engA [Bacillus cereus AH1273] Length = 436 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DDETIRFSLIGRPNVGKSSLVNALLGQERV-IVSNIAGTTRDAV------DTPYSKDDQD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ +K + L Sbjct: 283 HDSGRAVIIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLDYAPIVFLSAKTKKRTQTLL 340 Query: 204 KAILE 208 I E Sbjct: 341 PVINE 345 Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGITRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S G+ L Sbjct: 112 KPIVLAVNKVD---------NPEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDE 158 >gi|229084606|ref|ZP_04216875.1| GTP-binding protein engA [Bacillus cereus Rock3-44] gi|228698682|gb|EEL51398.1| GTP-binding protein engA [Bacillus cereus Rock3-44] Length = 436 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DDETIRFSLIGRPNVGKSSLVNALLGQERV-IVSNVAGTTRDAV------DTPYSKDGQD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ +K + L Sbjct: 283 HDSGRAVIIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLDYAPIVFLSAKTKKRTQTLL 340 Query: 204 KAILE 208 I E Sbjct: 341 PVINE 345 Score = 94.5 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGVTRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDES-------DVIIFMTNGRDGVTAADEEVAKILYRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S G+ L Sbjct: 112 KPVVLAVNKVD---------NPEMRNDIYDFYALGFGEPFPISGTHGLGLGDLLDE 158 >gi|160915033|ref|ZP_02077246.1| hypothetical protein EUBDOL_01041 [Eubacterium dolichum DSM 3991] gi|158432832|gb|EDP11121.1| hypothetical protein EUBDOL_01041 [Eubacterium dolichum DSM 3991] Length = 298 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 17/174 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR N GKS+L+N ++ K +A T+ P T++ + L VD Sbjct: 8 IAIVGRPNAGKSTLLNAILKEK-VAITTPKPQTTRNNISGI------LTTEDTQYVFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + + L + S + ++D D+ + + + Sbjct: 61 PGIHKPK-----HELGRTLNKNAYTAISEADVNFWVVDATQPYGSGDEFMLEKMKSAHIP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++L KID L + L + + + E+ P S++ IE L + Sbjct: 116 VFLILNKIDLLEKEKLLKVLARWQERME-----FAEIFPISALTNDNIEHLLEI 164 >gi|290769994|gb|ADD61761.1| putative protein [uncultured organism] Length = 322 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 71/181 (39%), Gaps = 17/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F GR NVGKS+L+N ++ +K +A TSN P T++ V D + VD Sbjct: 28 VTFIGRPNVGKSTLMNQIIGQK-IAITSNKPQTTRNRIQTVYTD------ERGQIVFVDT 80 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A+ ++ S + + L++ + ++ + L + Sbjct: 81 PGIHKAKN-----KLGEYMVGAAEKTISEVDLICWLVEPTTHLGAAEEHIVEKLKECKTP 135 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ K D + ++ + + +++P + ++ L I ++ Sbjct: 136 IVLVINKTDTIKKEEILPVIDCYRKEL-----DFVDIVPVCARNGNNVDDLLDVIFSHLD 190 Query: 212 Y 212 Y Sbjct: 191 Y 191 >gi|227872320|ref|ZP_03990675.1| GTPase [Oribacterium sinus F0268] gi|227841827|gb|EEJ52102.1| GTPase [Oribacterium sinus F0268] Length = 440 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 73/200 (36%), Gaps = 24/200 (12%) Query: 21 IGLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + PK G E IA G+ NVGKSSL N L+ + S+ G T+ Sbjct: 162 VKHFPKEGLEEEEDGTLKIALIGKPNVGKSSLTNKLLGENRV-IVSDIAGTTRDAI---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + N +D G ++++ + + +R+ + +LID G Sbjct: 217 --DTEVTYNGTPYIFIDTAGLRRKGKVTEDIERYSVIRTVAAVDRADI--CIVLIDAVEG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPT 191 + D + + I + K D + +T+++ ++ + E + Sbjct: 273 ITDGDTRIAGIAHESGKGVIIAVNKWDLVEKND--KTMQEFTKQLKEKFAYMDYAEYLFI 330 Query: 192 SSVKRKGIEVLRKAILETIN 211 S+ + I I E +N Sbjct: 331 SAETGQRIHK----IYELVN 346 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 61/178 (34%), Gaps = 19/178 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N + K ++ + PG T+ + + +VD Sbjct: 6 VAVVGRPNVGKSTLFNTIAG-KQISIVQDTPGVTRDRIYAEGNWLNYY------FTMVDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G P + + + T + + D + GV D +V L + Sbjct: 59 GGI----EPISDDVLLKQMRSQAELAIETADVIIFVTDVKSGVVDADYEVAEMLRRSKKP 114 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D + + Y E P S+ G+ L +++ Sbjct: 115 IVLCVNKVDSIKKYGND--------IYEFYQLGLGEPFPVSAANHLGLGDLLDEVVKH 164 >gi|294655634|ref|XP_002770159.1| DEHA2C02970p [Debaryomyces hansenii CBS767] gi|199430484|emb|CAR65526.1| DEHA2C02970p [Debaryomyces hansenii] Length = 414 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 24/161 (14%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNL----------ARTSNAPGRTQHLNFFVPKDFSN 78 PE+ G +NVGKSSLIN L+ + A S G T+ LN F Sbjct: 162 MPEVLLLGNTNVGKSSLINSLLVNREENKSANLSTEHAFVSKRAGYTKTLNCF------- 214 Query: 79 LKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQID 138 N + ++D PGYG + G +I Y+++ +LR V++LID G ++ D Sbjct: 215 --NIGNKLRIMDSPGYGEFGESSQ-----GEVITDYITKGQSLRRVFVLIDSVKGFQEED 267 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + FL + +S+ ++ TK+D++ + L +K+ + Sbjct: 268 LHIIDFLISEGISFDLIFTKVDQVIQKFMPKKLINSKHANK 308 >gi|147677230|ref|YP_001211445.1| GTPase [Pelotomaculum thermopropionicum SI] gi|146273327|dbj|BAF59076.1| GTPase [Pelotomaculum thermopropionicum SI] Length = 300 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L+N L+ RK +A S P T++ K L + +D Sbjct: 11 VAIIGRTNVGKSTLLNSLLGRK-VAIMSEKPQTTRN------KILCVLTREDAQVVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG+ + L+ L + V L++ D V Sbjct: 64 PGFHKPK-----HKLGEHLVQVALRTLKEVDLVLFLVEAGQPPGPGDHYVIKQFAGLKTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID + +E+ L E++P S++ + + L + ++ + Sbjct: 119 VLLVINKIDLVRREELLPLIEQYSGLF-----GFAEIVPVSALTGENLPRLLEVVVRYL 172 >gi|124025156|ref|YP_001014272.1| GTP-binding protein EngA [Prochlorococcus marinus str. NATL1A] gi|166225837|sp|A2C0J7|DER_PROM1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|123960224|gb|ABM75007.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str. NATL1A] Length = 456 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 20/189 (10%) Query: 21 IGLLPKAGPPEI-------AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + L P E+ A GR NVGKSSL+N + A S+ G T+ Sbjct: 162 VNLFPSKDLDEVSDSPVQLAIIGRPNVGKSSLLNSICGETR-AIVSSIRGTTRDTI---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + + LVD G R+ + +G I R L+ID G Sbjct: 217 --DTRITHQGKEWKLVDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDVCVLVIDALDG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPT 191 V + DQ + ++++ + IV+ K D + T+ + IR+ Y ++I T Sbjct: 273 VTEQDQRLAGRIEQEGRACLIVINKWDAVEKD--SHTMSAMEKDIRSKLYFLDWAQMIFT 330 Query: 192 SSVKRKGIE 200 S+V + +E Sbjct: 331 SAVTGQRVE 339 Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 64/184 (34%), Gaps = 25/184 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A + PG T+ + + + + Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLC-QSREAIVHDEPGVTRD------RTYQDGFWRDRDFKV 55 Query: 89 VDMPGYGYARAPK---KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G + + + + + +++D + G+ D+ + FL Sbjct: 56 VDTGGLVFDDDSEFLPEIREQANLALEE-------AVVALVIVDGQEGITTADESIAEFL 108 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ +V+ K + + + E P S++ G L Sbjct: 109 RSRSCKTLVVVNKC--------ESPEQGLAMAAEFWKLGLGEPYPISAIHGVGTGDLLDQ 160 Query: 206 ILET 209 ++ Sbjct: 161 VVNL 164 >gi|73749080|ref|YP_308319.1| GTP-binding protein EngA [Dehalococcoides sp. CBDB1] gi|73660796|emb|CAI83403.1| GTP-binding protein EngA [Dehalococcoides sp. CBDB1] Length = 442 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 65/185 (35%), Gaps = 20/185 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA GR NVGKS+L+N L KNLA T + PG T+ F Sbjct: 3 NTTTPIIAIVGRQNVGKSTLLNRLA-HKNLAITEDLPGTTRDRLFATVSWLD------RR 55 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + +VD G ++V I L V L++D + G+ D ++ + Sbjct: 56 LIMVDTGGLDPDI---ESVIGQQVNIQISL-AIKEADLVLLVVDVKDGLITPDYEMADII 111 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V K D L Y E S+ GI L Sbjct: 112 RRTGKPVILVANKADNLKMGQ---------EATEFYSLGFGEPAVISAFHGTGISDLMDR 162 Query: 206 ILETI 210 +LE + Sbjct: 163 VLEEL 167 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 69/177 (38%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++A GR+NVGKS+L+N + + + SN PG T+ + L + Sbjct: 177 EDTSVKLALVGRTNVGKSTLLNTFLGEER-SIVSNIPGTTRDAI------DTPLDFDGTN 229 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G + V+ + L R L V L++D V D + ++ Sbjct: 230 VLLIDTAGIRRRGKVESGVEKYSVL--RALKAIDRADVVLLVMDTEELVTAQDTHIAGYV 287 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 A I+L K D E + + + A ++ S +G++ + Sbjct: 288 RDTAKGIIIILNKWDLGKGQDKAEVTQTIQSRFKFLDYA--PILFVSGKTGRGVDAI 342 >gi|197303325|ref|ZP_03168365.1| hypothetical protein RUMLAC_02048 [Ruminococcus lactaris ATCC 29176] gi|197297609|gb|EDY32169.1| hypothetical protein RUMLAC_02048 [Ruminococcus lactaris ATCC 29176] Length = 300 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 17/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ V L + VD Sbjct: 10 VTLIGRPNVGKSTLMNHLIGQK-IAITSNKPQTTRNRIQTV------LTTEEGQIVFVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A K + + I + + V L++ + + ++ + L K Sbjct: 63 PGIHKA---KNKLGEYMVNIAE--RSLNEVDVVLWLVEPSNFIGAGEKHIIEQLKKVKTP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V+ KID + ++ + E++P S+ + L K IL + Sbjct: 118 VILVINKIDMVKREEILAFIDTYRKE-----YDFAEIVPVSARTGDNTDELVKVILNYLP 172 Query: 212 Y 212 Y Sbjct: 173 Y 173 >gi|158425952|ref|YP_001527244.1| GTP-binding protein EngA [Azorhizobium caulinodans ORS 571] gi|172047845|sp|A8HVL5|DER_AZOC5 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|158332841|dbj|BAF90326.1| transcriptional regulator [Azorhizobium caulinodans ORS 571] Length = 453 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 65/179 (36%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV K LA + PG T+ + + A +VD Sbjct: 5 LAIVGRPNVGKSTLFNRLVG-KRLALVDDRPGVTRDRR------EGDARLGDLAFRIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A A G + + + + LID R G+ D+ S + Sbjct: 58 AGLEEADADSLE----GRMRAQTETAIGDADALLFLIDARVGLTPTDRAFASLARRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K S E + Y +P S+ +G+ L AI E + Sbjct: 114 TILVANK----SEGRGGEA-----GAMEAYELGLGAPVPLSAEHGEGLSDLYDAICEAL 163 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 67/184 (36%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P ++A GR N GKS+LIN L+ L T G T+ N A Sbjct: 183 PNRPIKVAVIGRPNAGKSTLINRLLGEDRL-LTGPEAGITRDSISVEVT------WNGRA 235 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + + D G + ++ L V +L+D ++ D + + Sbjct: 236 LEVFDTAGLRKRARIEDKLEKLSA--ADALRAMKFAEVVVVLMDATKPFEEQDLRIADLV 293 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + + K D + P E+ + + ++P S + +G++ L +A Sbjct: 294 VREGRALVLGYNKSDLVGPAAFSRLREEADHWLPQVKG--VPIVPLSGLTGRGLDKLVEA 351 Query: 206 ILET 209 I T Sbjct: 352 IAAT 355 >gi|254252261|ref|ZP_04945579.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158] gi|124894870|gb|EAY68750.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158] Length = 445 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 75/184 (40%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGVKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L + V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSIADANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D L + ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGLDEHARERAKADLTRKLKFLDFAKSHFI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGARPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVATDFYELGLGDPRAISAAHGDGV 152 >gi|325068743|ref|ZP_08127416.1| GTP-binding protein Der [Actinomyces oris K20] Length = 533 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 21/185 (11%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G P +A GR NVGKS+L+N ++ R+ A + PG T+ + + Sbjct: 93 EPGLPVLAVVGRPNVGKSTLVNRVLGRRE-AVVQDTPGVTRDRVSY------PAEWAGRR 145 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G+ A + I V L++D + G+ + D V L Sbjct: 146 FTIVDTGGWEVDVAGLDAAVATQAEI-----AVEMADAVLLVVDAQVGITETDARVVRML 200 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D + TL + E P S++ +G + A Sbjct: 201 RRSGKPVVLAANKVDSPAQEGDAATL---------WNLGLGEPFPVSALHGRGSGEVLDA 251 Query: 206 ILETI 210 ++E + Sbjct: 252 VMEVL 256 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 9/155 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR NVGKSSL+N + R+ + + G T+ ++ + Sbjct: 267 PEGDLHRIALVGRPNVGKSSLLNSIAGRERVV-VNETAGTTRDPV------DEIIELDGR 319 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G + D + L + +L+D + + D V Sbjct: 320 QWVFVDTAGIRRRVKQSRGADYYAVLRTQ--GAIDKAEVAVVLLDASEPISEQDVRVVQQ 377 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + +V K D + + L + ++ + Sbjct: 378 AVDAGRALVLVNNKWDLVDEERQKMLLWEVEHDLA 412 >gi|254693167|ref|ZP_05154995.1| GTP-binding protein EngA [Brucella abortus bv. 3 str. Tulya] gi|261213405|ref|ZP_05927686.1| GTP-binding protein engA [Brucella abortus bv. 3 str. Tulya] gi|260915012|gb|EEX81873.1| GTP-binding protein engA [Brucella abortus bv. 3 str. Tulya] Length = 483 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 5 LAIVGRPNVGKSTLFNRLVGRK-LALVDDLPGVTRDRRIHDAKLYDL------KFQVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + + S V +ID + G+ D + + Sbjct: 58 AGLEEAANDSLEA----RMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + E P S+ +G+ LR AI+E + Sbjct: 114 VVLVANKA---------EARGSEAGMYDAFQLGLGEPCPISAEHGQGMPDLRDAIVELLG 164 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 13/194 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 EI P IA GR N GKS+LIN ++ L T G T+ + Sbjct: 200 AEEIPAYDATKPLRIAIVGRPNAGKSTLINTMLGEDRL-LTGPEAGITRDSI------SA 252 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + + + L D G ++ ++ + L V +++D ++ Sbjct: 253 DWEWHGRKINLFDTAGMRRKARVQEKLEKLS--VADSLRAIRFAEVVIIVLDATIPFEKQ 310 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + ++ + I K D + + EKT L+ +P S + Sbjct: 311 DLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTARLLPQVRGLRA--VPISGER 368 Query: 196 RKGIEVLRKAILET 209 +GI+ L + +++T Sbjct: 369 GQGIDKLMENVVKT 382 >gi|147669843|ref|YP_001214661.1| GTP-binding protein EngA [Dehalococcoides sp. BAV1] gi|146270791|gb|ABQ17783.1| small GTP-binding protein [Dehalococcoides sp. BAV1] Length = 442 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 65/185 (35%), Gaps = 20/185 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA GR NVGKS+L+N L KNLA T + PG T+ F Sbjct: 3 NTTTPIIAIVGRQNVGKSTLLNRLA-HKNLAITEDLPGTTRDRLFATVSWLD------RR 55 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + +VD G ++V I L V L++D + G+ D ++ + Sbjct: 56 LIMVDTGGLDPDI---ESVIGQQVNIQISL-AIKEADLVLLVVDVKDGLITPDYEMADII 111 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V K D L Y E S+ GI L Sbjct: 112 RRTGKPVILVANKADNLKMGQ---------EATEFYSLGFGEPAVISAFHGTGISDLMDR 162 Query: 206 ILETI 210 +LE + Sbjct: 163 VLEEL 167 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++A GR+NVGKS+L+N + + SN PG T+ + L + Sbjct: 177 EDTSVKLALVGRTNVGKSTLLNTFLGEDR-SIVSNIPGTTRDAI------DTPLDFDGTN 229 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G + V+ + L R L V L++D V D + ++ Sbjct: 230 VLLIDTAGIRRRGKVESGVEKYSVL--RALKAIDRADVVLLVMDTEELVTAQDTHIAGYV 287 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 A I+L K D E + + + A ++ S +G++ + Sbjct: 288 RDTAKGIIIILNKWDLGKGQDKAEVTQTIQSRFKFLDYA--PILFVSGKTGRGVDTI 342 >gi|319651358|ref|ZP_08005487.1| GTP-binding protein EngA [Bacillus sp. 2_A_57_CT2] gi|317396889|gb|EFV77598.1| GTP-binding protein EngA [Bacillus sp. 2_A_57_CT2] Length = 436 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 13/178 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 + + GR NVGKSSL+N ++ + + SN G T+ S +K + Sbjct: 173 EDVIKFSLIGRPNVGKSSLVNAMLGEERV-IVSNIAGTTRDAI------DSKVKVDGQEY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + + + L R L V ++ID G+ + D+ + + Sbjct: 226 VIIDTAGMRKKGKVYETTEKYSVL--RALRAIERSDVVLVVIDGEEGIIEQDKRIAGYAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVL 202 + + IV+ K D + T++ + IR + + ++ S+ +K I L Sbjct: 284 EAGRAVVIVVNKWDAVEKDER--TMKAFEQNIREHFQFLDYAPIVFLSAKTKKRIHTL 339 Score = 92.1 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + ++ N+ + Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-ISIVEDIPGVTRDRI-YSSAEWLTHDFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + ++ I + L++ R GV D++V L K Sbjct: 62 DIGDEPFL---EQIRLQAEIAIDE-------ADVIIFLVNGREGVTSADEEVAKILYKAK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + KID E + Y E P S G+ L Sbjct: 112 KPVVLGVNKID---------NPEMRDLVYDFYALGFGEPFPISGSHGLGLGDLLDE 158 >gi|17987833|ref|NP_540467.1| GTP-binding protein EngA [Brucella melitensis bv. 1 str. 16M] gi|225851918|ref|YP_002732151.1| GTP-binding protein EngA [Brucella melitensis ATCC 23457] gi|256044100|ref|ZP_05447011.1| GTP-binding protein EngA [Brucella melitensis bv. 1 str. Rev.1] gi|256112898|ref|ZP_05453814.1| GTP-binding protein EngA [Brucella melitensis bv. 3 str. Ether] gi|256264570|ref|ZP_05467102.1| GTP-binding protein engA [Brucella melitensis bv. 2 str. 63/9] gi|260563458|ref|ZP_05833944.1| GTP-binding protein engA [Brucella melitensis bv. 1 str. 16M] gi|265990512|ref|ZP_06103069.1| GTP-binding protein engA [Brucella melitensis bv. 1 str. Rev.1] gi|265994340|ref|ZP_06106897.1| GTP-binding protein engA [Brucella melitensis bv. 3 str. Ether] gi|26006723|sp|Q8YFH2|DER_BRUME RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783140|sp|C0RH89|DER_BRUMB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|17983561|gb|AAL52731.1| gtp-binding protein [Brucella melitensis bv. 1 str. 16M] gi|225640283|gb|ACO00197.1| small GTP-binding protein [Brucella melitensis ATCC 23457] gi|260153474|gb|EEW88566.1| GTP-binding protein engA [Brucella melitensis bv. 1 str. 16M] gi|262765453|gb|EEZ11242.1| GTP-binding protein engA [Brucella melitensis bv. 3 str. Ether] gi|263001296|gb|EEZ13871.1| GTP-binding protein engA [Brucella melitensis bv. 1 str. Rev.1] gi|263094935|gb|EEZ18643.1| GTP-binding protein engA [Brucella melitensis bv. 2 str. 63/9] gi|326408416|gb|ADZ65481.1| GTP-binding protein EngA [Brucella melitensis M28] gi|326538130|gb|ADZ86345.1| small GTP-binding protein [Brucella melitensis M5-90] Length = 483 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 5 LAIVGRPNVGKSTLFNRLVGRK-LALVDDLPGVTRDRRIHDAKLYDL------KFQVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + + S V +ID + G+ D + + Sbjct: 58 AGLEEAANDSLEA----RMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + E P S+ +G+ LR AI+E + Sbjct: 114 VVLVANKA---------EARGSEAGMYDAFQLGLGEPCPISAEHGQGMPDLRDAIVELLG 164 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 13/194 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 EI P IA GR N GKS+LIN ++ L T G T+ + Sbjct: 200 AEEIPAYDATKPLRIAIVGRPNAGKSTLINTMLGEDRL-LTGPEAGITRDSI------SA 252 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + + + L D G ++ ++ + L V +++D ++ Sbjct: 253 DWEWHGRKIKLFDTAGMRRKARVQEKLEKLS--VADSLRAIRFAEVVIIVLDATIPFEKQ 310 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + ++ + I K D + + EKT L+ +P S + Sbjct: 311 DLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTARLLPQVRGLRA--VPISGER 368 Query: 196 RKGIEVLRKAILET 209 +GI+ L + +++T Sbjct: 369 GQGIDKLMENVVKT 382 >gi|170750287|ref|YP_001756547.1| small GTP-binding protein [Methylobacterium radiotolerans JCM 2831] gi|170656809|gb|ACB25864.1| small GTP-binding protein [Methylobacterium radiotolerans JCM 2831] Length = 448 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 65/179 (36%), Gaps = 20/179 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L N LV +K LA + PG T+ ++ Sbjct: 2 DMPTVAIVGRPNVGKSTLFNRLVGKK-LALVDDRPGVTRDRR------EGDVAFGGLEFR 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G A A G + ++ + V +ID R GV DQ + + Sbjct: 55 VIDTAGLEEADAAS----LTGRMRMQTEAAILAADVVLFVIDARAGVLPADQPFAELVRR 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 ++ K E + + IP S+ +G+ L +A+ Sbjct: 111 AGCPVILIANK---------AEGGAGLAGAYEAFTLGLGDPIPFSAEHGEGLGELHEAL 160 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 68/181 (37%), Gaps = 13/181 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR N GKS+LIN ++ L G T+ + + + L D Sbjct: 183 KVAIVGRPNAGKSTLINRMLGEDRL-LVGPEAGITRDSI------SLDWEWRGRRIKLHD 235 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G ++ + L V +L+D ++ D + ++ + Sbjct: 236 TAGMRRRARIDDKLEKLA--VSDGLRAVRFAEVVVVLLDATIPFEKQDLTIVDLVESEGR 293 Query: 151 SYQIVLTKIDKLS--PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + I L K D ++ P ++ E L+ V+P S + G++ L +A+++ Sbjct: 294 ALVIGLNKWDLVADQPGLLKQLREDCTRLLPQVRG--VAVVPLSGLAGDGVDKLMQAVVQ 351 Query: 209 T 209 Sbjct: 352 A 352 >gi|121997392|ref|YP_001002179.1| GTP-binding protein EngA [Halorhodospira halophila SL1] gi|166198720|sp|A1WUL5|DER_HALHL RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|121588797|gb|ABM61377.1| small GTP-binding protein [Halorhodospira halophila SL1] Length = 472 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 12/182 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 G P +A GR NVGKS+L+N L+ + + + PG T+ + + Sbjct: 175 PGGIP-VAMIGRPNVGKSTLVNRLLGEERVV-VYDEPGTTRDSI------AVPFERDGQH 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ V+ + +V+ L V L+ D + G+ + D + + Sbjct: 227 YTLIDTAGVRRRARVQETVEKFS--VVKTLEAIERASVVMLVTDAQEGITEQDAHLAGHV 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + +V+ K D L P ++ +R S++ G+ +L ++ Sbjct: 285 LQAGRALVLVINKWDGLDPDQRRKVRRDLD--LRFAFLGFARHHFVSALHGSGVGLLLES 342 Query: 206 IL 207 + Sbjct: 343 VE 344 Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N L ++ A ++ PG T+ + + + +VD Sbjct: 5 IALVGRPNVGKSTLFNRLTGSRD-ALVADHPGLTRDRQYGIVRHQGGHA------VVVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G G ++ G + + + + V L+D + G D+++ + L + V Sbjct: 58 GGMG-----EELEGVGGCMHEQARAAIAGADAVVFLVDGQAGATVGDEEIAAELRRAQVP 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K D L A + V ++ + +G+ L A+ + Sbjct: 113 VFLAVNKTDGLDAGVAAA---------DFHGLGLQPVHAIAATRGRGVGELLDAVFALL 162 >gi|269468621|gb|EEZ80265.1| GTPase [uncultured SUP05 cluster bacterium] Length = 294 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+LIN L+ +K L+ TS+ P T+H + + M VD Sbjct: 8 IAVVGRPNVGKSTLINELIGQK-LSITSHRPQTTRHRIHAIDT------ADNYQMVFVDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + S + + L++ + D V +++ V Sbjct: 61 PGIHIGNK----KAINSYMNKAASSSIRDVDMILWLVES-DKWTKEDSRVLEHIEQVDVP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KIDKL +AQE L + + Y E+ P S+ K++ + LR+ IL+ + Sbjct: 116 VILCINKIDKL--RSAQEVLPFLEKIATKYQPT--ELFPLSAFKKRDTQALRELILKHL 170 >gi|119775495|ref|YP_928235.1| GTP-binding protein EngA [Shewanella amazonensis SB2B] gi|166225853|sp|A1S859|DER_SHEAM RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|119767995|gb|ABM00566.1| small GTP-binding protein domain [Shewanella amazonensis SB2B] Length = 488 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 73/185 (39%), Gaps = 11/185 (5%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P ++A G+ NVGKS+L N ++ + + + PG T+ + ++ + Sbjct: 197 EQPIKLAIIGKPNVGKSTLTNRILGEERVV-VYDQPGTTRDSVYI------PMERDGRNY 249 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + ++ + +++ L V L+ID G+ + D + F+ Sbjct: 250 VLIDTAGVRRRARVHEVIEKFS--VIKTLKAVEDSNVVLLVIDAHEGIAEQDLGLLGFVL 307 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K D L KT+ R + S++ G+ L ++I Sbjct: 308 NSGRALVLAVNKWDGLDQDVKDRV--KTELDRRLGFIDFARIHFISALHGTGVGHLFESI 365 Query: 207 LETIN 211 E + Sbjct: 366 EEAYD 370 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 12/135 (8%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + Sbjct: 2 IPVVALVGRPNVGKSTLFNRLTRTRD-ALVADYPGLTRDRKY------GRAHLSGYEFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +++ + + L+ V + D R G+ D + L + Sbjct: 55 VDTGGI---DGTEEGIET--KMAEQSLAAIEEADVVLFMTDARAGLTAADLAIAQHLRSR 109 Query: 149 AVSYQIVLTKIDKLS 163 +V K+D + Sbjct: 110 DKITFVVANKVDGID 124 >gi|220912306|ref|YP_002487615.1| GTP-binding protein EngA [Arthrobacter chlorophenolicus A6] gi|219859184|gb|ACL39526.1| small GTP-binding protein [Arthrobacter chlorophenolicus A6] Length = 516 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 68/186 (36%), Gaps = 21/186 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +A GR NVGKS+L+N ++ R+ A + PG T+ + N Sbjct: 74 PVKLDPVLAIIGRPNVGKSTLVNRILGRRE-AVVEDTPGVTRDRVMYSAS------WNGR 126 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G+ + + + L+ V ++D G D+ V Sbjct: 127 NFTLVDTGGWEHDARGIHARVAEQAEMAVELA-----DAVLFVVDSAVGATATDEGVMKM 181 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K+D + L + E P S++ +G+ L Sbjct: 182 LRRSKKPVIMVANKVDDFAQEADSAAL---------WGLGFGEPYPVSALHGRGVADLLD 232 Query: 205 AILETI 210 +++ + Sbjct: 233 HVMDVL 238 Score = 96.8 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 64/176 (36%), Gaps = 11/176 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 GP IA GR NVGKSSL+N L + + N G T+ +F L + Sbjct: 251 GGPRRIALIGRPNVGKSSLLNKLAGTERVV-VDNTAGTTRDP----VDEFIELGD--RTW 303 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G + + D + L + E++ + V L +D + + D + Sbjct: 304 RFVDTAGIRRRQHMAQGADYYASLRTQAALEKAEVAVVLLAVD--EVLSEQDVRILQLAI 361 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + K D L + LE+ + P V S+ + L Sbjct: 362 ESGRALVLAFNKWDLLDD-ERRRYLEREIEQDLAHVEWAPRV-NISAKTGWHKDRL 415 >gi|150402460|ref|YP_001329754.1| GTP-binding protein [Methanococcus maripaludis C7] gi|150033490|gb|ABR65603.1| GTP-binding protein HSR1-related [Methanococcus maripaludis C7] Length = 227 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 82/201 (40%), Gaps = 28/201 (13%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P++ GRSNVGKS+ + ++ + R PG T ++ + ++ Sbjct: 32 DERPKVIVMGRSNVGKSTFVKLVTGKN--VRVGKKPGVTLKISEY----------DMGTY 79 Query: 87 ALVDMPGYGY-ARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-----------HG 133 LVD+PG+G+ KK + I+ Y+ + ++D + G Sbjct: 80 ILVDLPGFGFMEGIEKKAQEKIKDQIIDYVENNKDTIAASIHILDAKSFIDIVERWDNKG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIP 190 ID ++ FL++ ++ V+ K+DK+ + L++ + P +P Sbjct: 140 EVPIDLEMADFLEELELNPIFVVNKMDKIKNSEWDNHLDRVSETLGFLPPWRQWLDNFVP 199 Query: 191 TSSVKRKGIEVLRKAILETIN 211 + GI+ ++ I + IN Sbjct: 200 AITRDNYGIDGIKHRINKRIN 220 >gi|149910154|ref|ZP_01898800.1| GTP-binding protein-like protein; GTPase [Moritella sp. PE36] gi|149806740|gb|EDM66704.1| GTP-binding protein-like protein; GTPase [Moritella sp. PE36] Length = 303 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 19/175 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H + + + +D Sbjct: 10 IAIVGRPNVGKSTLLNRILGQK-VSITSRKPQTTRHRILGIDTE------DNRQTVYIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER---STLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 PG + L+ R S + V ++D D+ V + L Sbjct: 63 PGLHI-----DEKRAINRLMNRAASSSLKDMNVDAVIFVVDGTR-WTDDDEMVLNKLRDI 116 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + K D + E + + L + E+IP S+ K +E+LR Sbjct: 117 NCPIYLAINKTDAIKDKDR-ELMPHLQVLAAKFK--FTEIIPISATKGTNVEMLR 168 >gi|91788466|ref|YP_549418.1| GTP-binding protein EngA [Polaromonas sp. JS666] gi|123355649|sp|Q12AC2|DER_POLSJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|91697691|gb|ABE44520.1| Small GTP-binding protein domain [Polaromonas sp. JS666] Length = 447 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 72/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +A +GR NVGKS+LIN + + L + + PG T+ + Sbjct: 176 DPSVIRLAVAGRPNVGKSTLINTWLGEERLV-SFDLPGTTRDAI------SVPFERAGQK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L V LL+D GV D + ++ Sbjct: 229 FELIDTAGLRRKGKVFEAIEKFS--VVKTLQAIEGANVVLLLLDATQGVTDQDAHIAGYI 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + + K D + + + + + S++KR+G+ + K+ Sbjct: 287 LESGRAVVLAINKWDAVDAYQRETLERSIETRLA--FLKFASIHKISAIKRQGLAPVWKS 344 Query: 206 ILET 209 I++ Sbjct: 345 IVQA 348 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 20/173 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N L ++ A ++ G T+ + + N K ++ Sbjct: 3 PVIALVGRPNVGKSTIFNRLTKTRD-AIVADFAGLTRD------RHYGNGKLGSHEYIVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ A + + + + V ++D R G+ D D+ +FL K Sbjct: 56 DTGGFEPDAASG----IYKEMAKQTRQAVAEADVVIFVVDARAGISAQDHDIANFLRKLG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + K E + + + EV+P S+ +G+ L Sbjct: 112 KPTVLTANKA---------EGMTEGVQFSEFFELGLGEVLPVSASHGQGMRSL 155 >gi|315924473|ref|ZP_07920695.1| ribosome-associated GTPase EngA [Pseudoramibacter alactolyticus ATCC 23263] gi|315622352|gb|EFV02311.1| ribosome-associated GTPase EngA [Pseudoramibacter alactolyticus ATCC 23263] Length = 440 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 70/179 (39%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G+ NVGKS+L N LV + +A N PG T+ ++ + L+ Sbjct: 3 PIVAVVGKPNVGKSTLFNKLVGER-IAIVENTPGVTRDRII------ADAEWQNHRFTLI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + V+ T + LL D R G+ D+DV L K+ Sbjct: 56 DTGGIELKTGNT----IMHQMRVQAEIAIETADLILLLCDGREGMTAADEDVADMLRKQH 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K+D + L Y + +P S+ + G+ L AI++ Sbjct: 112 KKVIVVVNKLDSVKLEER---------LYEFYNLGLGDPLPISAEQGLGLGDLLDAIVD 161 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 17/189 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G IA G+ N GKS+L+N L+ + S+ PG T+ S ++ Sbjct: 173 EDGSLHIAVVGKPNAGKSTLVNQLIGENRM-IVSDIPGTTRDAI------DSKIERGGVE 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G V+ + I+R ++ V ++++ + GV + D + Sbjct: 226 YTFIDTAGLRRKSKIADEVERYS--IIRAIAAVDRADVVLMMVNAQTGVTEQDSKIAGIA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLR 203 + + IV+ K D + T +T++K IRN P ++ S+ K E Sbjct: 284 HNRFIPTIIVVNKWDLIEKDT--KTMQKMTGDIRNSLAFMPYAPMLFISAKTGKRAEK-- 339 Query: 204 KAILETINY 212 I + I Y Sbjct: 340 --IYDKIQY 346 >gi|315303200|ref|ZP_07873857.1| GTP-binding protein Era [Listeria ivanovii FSL F6-596] gi|313628427|gb|EFR96903.1| GTP-binding protein Era [Listeria ivanovii FSL F6-596] Length = 301 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 17/173 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ T++ V + + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQK-IAIMSDKAQTTRNKVQGVYT------TDESQIIFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + I L+ + +Y +ID G + D+ + L Sbjct: 63 PGI---HKPKHKLGDFMVKIA--LNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQTP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +++ KID +SP + +E+ + L+ E+IP S+++ + L Sbjct: 118 VFLLINKIDLISPEELFKLIEQYRELL-----DFEEIIPISALQGNNVPNLLD 165 >gi|283779752|ref|YP_003370507.1| small GTP-binding protein [Pirellula staleyi DSM 6068] gi|283438205|gb|ADB16647.1| small GTP-binding protein [Pirellula staleyi DSM 6068] Length = 486 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 22/183 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P++ GR NVGKSSL+N L K ++ + G T+ ++ ++ L Sbjct: 3 VPQVVIVGRPNVGKSSLLNWLAG-KRISIVDDTAGVTRDRITYLMEEEGRF------FEL 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 VD G G + D+ + + + + V ++D R G+ +D++V L Sbjct: 56 VDTGGIGIV-----DCDNLTKQVEQQIEIAIESADLVLFVVDTRSGILPLDEEVAKRLRY 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 V K D + ++ Y +++ S+++ + + L IL Sbjct: 111 IDKPIVCVANKAD-------HDAID--CQADEFYKLGRGKLVRVSTLQNRNKDELLHMIL 161 Query: 208 ETI 210 E + Sbjct: 162 ERL 164 Score = 85.2 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 72/187 (38%), Gaps = 12/187 (6%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 ++ P+ ++A GR N GKS+ +N L + + S G T+ Sbjct: 169 DLEESPEEPIMKVAICGRRNTGKSTFVNTLARAERV-IVSEVAGTTRDSI------DVRF 221 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + + +D PG R+ + ++D + + R+ + ++ DC+ + ++D+ Sbjct: 222 ELDGKTFMAIDTPGLRRNRSVRTDIDFYSTHRAQRSIRRADVVLLFF--DCKQRLSKVDK 279 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT-AHPEVIPTSSVKRKG 198 + ++ V+ K D L E YL N+PT H + + K Sbjct: 280 QLCKYIADNYRPCIFVVNKWDLLYGQMPTER--WVDYLRDNFPTMWHVPIAFVTGQTGKN 337 Query: 199 IEVLRKA 205 ++ L Sbjct: 338 VKALLNH 344 >gi|260771921|ref|ZP_05880839.1| GTP-binding protein Era [Vibrio metschnikovii CIP 69.14] gi|260613213|gb|EEX38414.1| GTP-binding protein Era [Vibrio metschnikovii CIP 69.14] Length = 321 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 20/177 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K ++ TS P T+H V VD Sbjct: 30 IAIVGRPNVGKSTLLNNILGQK-ISITSRKPQTTRHRIMGVDTK------GDYQAVYVDT 82 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V ++D H D+ V + L + Sbjct: 83 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVLFVVDGTH-WTADDEMVLNKLRQANF 136 Query: 151 SYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K+D + ++ L+ +++P S+ K I+VL + + Sbjct: 137 PVVLCINKVDNVKDRNDVMRHMQDLSSLMN-----FVDIVPISAKLGKNIDVLHQHV 188 >gi|90412087|ref|ZP_01220094.1| GTP-binding protein Era [Photobacterium profundum 3TCK] gi|90327065|gb|EAS43444.1| GTP-binding protein Era [Photobacterium profundum 3TCK] Length = 301 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N LV +K L+ TS P T+H V + +D Sbjct: 10 IAIVGRPNVGKSTLLNRLVGQK-LSITSRKPQTTRHRIMGVDT------RDGYQAVFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S + + V L+D D+ V + L K + Sbjct: 63 PGLHI-----EEKRTINRLMNRAASSSLTDVELVLFLVDGTV-WTADDEMVLNKLKKSGL 116 Query: 151 SYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +++ K+D + L+ + +V+P S+ ++ + K + Sbjct: 117 PTVLLINKVDNVKEKGDLFPHLDALSKKM-----DFVDVVPISAKSGTNVDAVEKIVRAH 171 Query: 210 I 210 I Sbjct: 172 I 172 >gi|22002507|gb|AAM82659.1| TrmE [Synechococcus elongatus PCC 7942] Length = 482 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 22/183 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P+IA GR NVGKSSL+N +R + A ++ PG T+ L S L + + Sbjct: 243 GPKIAIVGRPNVGKSSLLNAW-SRCDRAIVTDLPGTTRDLV------ESQLIVGGIPVQV 295 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G R V+ G + R + V L ID G DQ ++ + Sbjct: 296 LDTAGI---RETSDQVEQIG--VERSRRAAQSADLVLLTIDASAGWSAEDQTIWEAV--S 348 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K D+LS E ++ I ++ T++ +++GIE L AIL Sbjct: 349 DRPILLVINKRDRLS--------EAERHAIALPQQEFKAIVWTAAAQQQGIEDLEAAILA 400 Query: 209 TIN 211 + Sbjct: 401 AVG 403 >gi|281358431|ref|ZP_06244912.1| ribosome-associated GTPase EngA [Victivallis vadensis ATCC BAA-548] gi|281315054|gb|EFA99086.1| ribosome-associated GTPase EngA [Victivallis vadensis ATCC BAA-548] Length = 513 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 9/192 (4%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 P P IA GR NVGKSSL+N L+ + + S+ G T+ + Sbjct: 190 SEAPAVKPLNIAVVGRPNVGKSSLVNALLGEERVM-VSDVAGTTRDA--IDVDFTLRYQG 246 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCR-HGVKQIDQD 140 A LVD G V+ + + + +R+ L V +++ G+ D+ Sbjct: 247 GDRAAVLVDTAGLRKKAKVDTVVEFFSVMRAQAAIDRADL--VLFVVEASPDGMTAQDRR 304 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA-HPEVIPTSSVKRKGI 199 + S + K + +V K D LE + L + P V+ S+ R + Sbjct: 305 IASMIQKAGKACVVVANKFDLYKSGHKVRALE--EELRYSLPGMNFSPVVFISAKDRSNL 362 Query: 200 EVLRKAILETIN 211 + L +I + ++ Sbjct: 363 DGLLDSIAQVMD 374 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 17/186 (9%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A GR NVGKSSL N +V R+ L+ PG T+ + L Sbjct: 11 PVHIPTVAIVGRPNVGKSSLFNAIVGRR-LSIVHEMPGVTRDRVV------APLVRGKCR 63 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 L+D G G + VD W I + + L+ + + GV +D++V + Sbjct: 64 FQLIDTGGLGMLSGETRKVDMWDSRIASQVDIAIGGADVLILVANVQDGVVNLDEEVAAR 123 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + K D +PT E++E K R + P S + ++G+ L + Sbjct: 124 LRESGKPVLFAANKCD--NPTLEHESVEFMKLGFRK-------IFPVSCLHKRGVNALVE 174 Query: 205 AILETI 210 A ++ + Sbjct: 175 AAIKLL 180 >gi|83591335|ref|YP_431344.1| tRNA modification GTPase TrmE [Moorella thermoacetica ATCC 39073] gi|123523726|sp|Q2RFI8|MNME_MOOTA RecName: Full=tRNA modification GTPase mnmE gi|83574249|gb|ABC20801.1| tRNA modification GTPase trmE [Moorella thermoacetica ATCC 39073] Length = 462 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 20/180 (11%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N L+N++ A SN PG T+ L+ L+D Sbjct: 222 KVAIVGRPNVGKSSLLNALLNQER-AIVSNIPGTTRDTI------EETLQLGGFTCRLID 274 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R ++S G + R + V +++D + G++ D+ V + K + Sbjct: 275 TAG---LRETADELESIG--VARSKKAIAAADLVLVVVDLQTGIQDEDRRVLESVRDKVL 329 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 I+ K+D + + L + NYP + S++K KG++ L + + E + Sbjct: 330 --IIIGNKLDLV-AHDINKKLADLESFAGNYPR-----VAVSALKGKGLDELARKVQEIV 381 >gi|218459464|ref|ZP_03499555.1| GTP-binding protein EngA [Rhizobium etli Kim 5] Length = 191 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ + ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRRPGEARLMGL------NFTIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A G + + + ++D ++G+ +D + L ++ Sbjct: 58 AGLEEADEES----LQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E Y E P S+ +G+ LR AI+E I Sbjct: 114 VVLVANKS---------EARGSDSGFYDAYTLGLGEPKPISAEHGEGMLDLRDAIVEAIG 164 >gi|167587055|ref|ZP_02379443.1| GTP-binding protein EngA [Burkholderia ubonensis Bu] Length = 445 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 75/179 (41%), Gaps = 11/179 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKS+L+N L+ + + PG T+ + + + N L+D Sbjct: 181 KIAIVGRPNVGKSTLVNTLIGEDRV-IAFDMPGTTRDSIY------VDFERNGKPYTLID 233 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L + V LL+D R + D + F+ ++ Sbjct: 234 TAGLRRRGKVFEAIEKFS--VVKTLQSIADANVVILLLDARQDISDQDAHIAGFVVEQGR 291 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D L P + T ++ + S+ ++ GI L +++ + Sbjct: 292 ALVVGVNKWDGLDPHVRERTKADLTRKLK--FLEFAKFHFISAAEKTGIGPLMRSVDDA 348 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 65/182 (35%), Gaps = 23/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K E ++ T Y + S+ G+ + I E Sbjct: 112 RPIFLVVNKS---------EGMKYTAVASDFYELGLGDPRAISAAHGDGVTEM---INEA 159 Query: 210 IN 211 + Sbjct: 160 LG 161 >gi|168703924|ref|ZP_02736201.1| probable GTP-binding protein [Gemmata obscuriglobus UQM 2246] Length = 495 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 70/183 (38%), Gaps = 22/183 (12%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKSSL N L R+ ++ G T+ V ++ L Sbjct: 3 LPLVAIVGRPNVGKSSLFNWLAGRR-ISIVDPTAGVTRDRVSTVV------EHGGRVWDL 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +D G G +VD + R + + V ++D R GV +D+DV + L Sbjct: 56 MDTGGIGIV-----DVDDLTADVERQIQFAIESAAVVVFMVDVREGVVPLDEDVAARLRA 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D + + E + S+ ++ G + L +AIL Sbjct: 111 INKPVVLVANKADTAKLGEQAGEFNRL---------GYGEPLCVSADQKLGKDELFEAIL 161 Query: 208 ETI 210 + Sbjct: 162 AQL 164 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 75/196 (38%), Gaps = 30/196 (15%) Query: 21 IGLLPKAGP---PE-----IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 + LP PE +A GR N GKS+ IN L + + S PG T+ Sbjct: 161 LAQLPPDTGEVAPEEPALMLAIVGRRNAGKSTFINSLAGGERV-IVSEIPGTTRDSV--- 216 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERST--LRCVYLLI-- 128 ++ + + +D G G I Y + R+ +R +++ Sbjct: 217 ---DVRIERDGKSYVAIDTAGVRKTAK-------MGTNIEFYSNHRAQRSVRRADVVMHF 266 Query: 129 -DCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 D RH V ++D+ + ++ ++ V+ K D + E + +Y+ + +P Sbjct: 267 FDARHRVSRVDKQLAEYVVEENKPAIFVVNKWDLVKEGMTTEEMA--EYMRKMFPMLDHV 324 Query: 188 VIPTSSVKRKGIEVLR 203 I + K G VLR Sbjct: 325 PIAFITAK-DGKNVLR 339 >gi|295094896|emb|CBK83987.1| ribosome-associated GTPase EngA [Coprococcus sp. ART55/1] Length = 440 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 76/199 (38%), Gaps = 16/199 (8%) Query: 14 FLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 F + + P IA G+ NVGKSS+IN L+ + S+ G T+ Sbjct: 165 FNESAKDDT---EDERPRIAIIGKPNVGKSSIINKLLGEDRV-IVSDIAGTTRDAV---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + N +D G K++++ + I+R +S L+ID G Sbjct: 217 --DTEIVRNGREYVFIDTAGLRRKSKIKEDIERYS--IIRTVSAVERCNVAVLVIDATEG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPT 191 + D + + I + K D + +T+ K IRN + P E++ Sbjct: 273 ITDQDAKIAGIAHDRGKGMIIAVNKWDAIEKND--KTIYKFTEEIRNKLSYMPYAELLFI 330 Query: 192 SSVKRKGIEVLRKAILETI 210 S+ + + L + I I Sbjct: 331 SAQTGQRLPKLFETIDAVI 349 Score = 98.7 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 19/182 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L K ++ + PG T+ + +++ L+ Sbjct: 4 PIVAIVGRPNVGKSTLFNVLAGEK-ISIVQDTPGVTRDRIY------ADINWLDYNFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ + + + T + + D R G+ D V L + Sbjct: 57 DTGGI----EPESDNIILKSMREQAEIAIETADVILFMTDVRQGMVDDDAKVADMLRRSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + Y + P S R GI + ++ Sbjct: 113 KPIVLVVNKVDSFEK--------FMPDVYEFYNLGLGDPHPISGSSRLGIGDMLDEVVSH 164 Query: 210 IN 211 N Sbjct: 165 FN 166 >gi|218673078|ref|ZP_03522747.1| GTP-binding protein EngA [Rhizobium etli GR56] Length = 393 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ + + ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGDARLMGLTFTIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A G + + + ++D ++G+ +D + L ++ Sbjct: 58 AGLEEADEES----LQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E Y E P S+ +G+ LR AI+E I Sbjct: 114 VVLVANKS---------EARGSDSGFYDAYTLGLGEPTPISAEHGQGMLDLRDAIVEAIG 164 Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 13/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A GR N GKS+LIN + L T G T+ V D+ Sbjct: 199 DTKPLRVAIVGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSIS-VEWDWRG-----RT 251 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + + D G + ++ + L V ++ D ++ D + + Sbjct: 252 IKMFDTAGMRRKARVTEKLEKLS--VADALRAIRFAETVVIVFDATIPFEKQDLQIVDLV 309 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 ++ + + K D + Q L + +P S G++ L Sbjct: 310 LREGRAAVLAFNKWDMI--EDRQAVLADLREKTDRLLPQARGIRAVPISGQTGWGLDKLM 367 Query: 204 KAILET 209 ++I++T Sbjct: 368 QSIIDT 373 >gi|114566850|ref|YP_754004.1| hypothetical protein Swol_1325 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337785|gb|ABI68633.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 441 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 83/189 (43%), Gaps = 17/189 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKSSL+N L+ + + S+ PG T+ + + Sbjct: 172 EGDAIKIAIVGRPNVGKSSLVNALLGEERV-IVSDVPGTTRDAI------DTPFQFKGQN 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G K+ + + ++R L V +++D GV + D+ + ++ Sbjct: 225 YLLIDTAGMRRKSRIKETTERYS--VIRTLKAIERADVVLIMLDATEGVAEQDKKIAGYV 282 Query: 146 DKKAVSYQIVLTKIDKL-SPTTAQETLEK-TKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 +++ + IV+ K D + +K + ++ ++ ++ S++ +K I Sbjct: 283 HEQSRANIIVVNKWDLVEKDGQTMNRFDKDIREELK--FLSYSPIMYVSALTKKRI---- 336 Query: 204 KAILETINY 212 +LE +N+ Sbjct: 337 FQVLEIVNF 345 Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L + A + PG T+ + D++ ++ Sbjct: 3 PVVAIVGRPNVGKSTLFNRLAGARK-AIVEDIPGVTRDR-LYDSSDWNG-----REFIII 55 Query: 90 DMPGYGYARA---PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G + ++ I + L++D R G+ D+ V + L Sbjct: 56 DTGGIRFNEGDIFAREIKLQAELAIEE-------ADVIVLVLDSREGITAEDEQVANLLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + K+ E +K Y + IP S++ L A+ Sbjct: 109 KSNKPVVLAANKV---------EEFKKQLDYYEFYKLGLGDPIPVSAMHGYNTNELLDAV 159 Query: 207 L 207 + Sbjct: 160 I 160 >gi|254701190|ref|ZP_05163018.1| GTP-binding protein EngA [Brucella suis bv. 5 str. 513] gi|261751727|ref|ZP_05995436.1| GTP-binding protein engA [Brucella suis bv. 5 str. 513] gi|261741480|gb|EEY29406.1| GTP-binding protein engA [Brucella suis bv. 5 str. 513] Length = 483 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 5 LAIVGRPNVGKSTLFNRLVGRK-LALVDDLPGVTRDRRIHDAKLYDL------KFQVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + + S V +ID + G+ D + + Sbjct: 58 AGLEEAANDSLEA----RMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + E P S+ +G+ LR AI+E + Sbjct: 114 VVLVANKA---------EARGSEAGMYDAFQLGLGEPCPISAEHGQGMPDLRDAIVEFLG 164 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 13/194 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 EI P IA GR N GKS+LIN ++ L T G T+ + Sbjct: 200 AEEIPAYDATKPLRIAIVGRPNAGKSTLINTMLGEDRL-LTGPEAGITRDSI------SA 252 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + + + L D G ++ ++ + L V +++D ++ Sbjct: 253 DWEWHGRKIKLFDTAGMRRKARVQEKLEKLS--VADGLRAIRFAEVVIIVLDATIPFEKQ 310 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + ++ + I K D + + EKT L+ +P S + Sbjct: 311 DLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTARLLPQVRGLRA--VPISGER 368 Query: 196 RKGIEVLRKAILET 209 +GI+ L + +++T Sbjct: 369 GQGIDKLMENVVKT 382 >gi|213418595|ref|ZP_03351661.1| GTP-binding protein EngA [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 320 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A ++ PG T+ + + Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKY------GRAEVEGREFIC 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + V++ + + L V ++D R G+ D+ + L + Sbjct: 55 IDTGGI---DGTEDGVET--RMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSR 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V K D L P A ++ Y E+ P ++ +G+ L + +L Sbjct: 110 EKPTFLVANKTDGLDPDQA---------VVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 9/139 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P++ P ++A GR NVGKS+L N ++ + + + PG T+ + Sbjct: 191 APEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVV-VYDMPGTTRDSIYI------ 243 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + L+D G V+ + +++ L V L+ID R G+ Sbjct: 244 PMERDEREYVLIDTAGVRKRGKITDAVEKFS--VIKTLQAIEDANVVLLVIDAREGISDQ 301 Query: 138 DQDVFSFLDKKAVSYQIVL 156 D + F+ S IV+ Sbjct: 302 DLSLLGFILNSGRSLVIVV 320 >gi|86358709|ref|YP_470601.1| GTP-binding protein EngA [Rhizobium etli CFN 42] gi|123511179|sp|Q2K5L2|DER_RHIEC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|86282811|gb|ABC91874.1| GTP-binding protein [Rhizobium etli CFN 42] Length = 473 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ + + ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGDARLMGLTFTIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A G + + + ++D ++G+ +D + L ++ Sbjct: 58 AGLEEADEES----LQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E Y E P S+ +G+ LR AI+E I Sbjct: 114 VVLVANKS---------EARGSDSGFYDAYTLGLGEPTPISAEHGQGMLDLRDAIVEAIG 164 Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 13/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR N GKS+LIN + L T G T+ V D+ Sbjct: 199 ETKPLRVAIVGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSIS-VEWDWRG-----RT 251 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + + D G + ++ + L V ++ D ++ D + + Sbjct: 252 IKMFDTAGMRRKARVTEKLEKLS--VADALRAIRFAETVVIVFDATIPFEKQDLQIVDLV 309 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 ++ + + K D + Q L + +P S G++ L Sbjct: 310 LREGRAAVLAFNKWDMI--EDRQAVLADLREKTDRLLPQARGIRAVPISGQTGWGLDKLM 367 Query: 204 KAILET 209 ++I++T Sbjct: 368 QSIIDT 373 >gi|262196911|ref|YP_003268120.1| ribosome-associated GTPase EngA [Haliangium ochraceum DSM 14365] gi|262080258|gb|ACY16227.1| ribosome-associated GTPase EngA [Haliangium ochraceum DSM 14365] Length = 518 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 70/183 (38%), Gaps = 21/183 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N LV + A + PG T+ + + LV Sbjct: 4 PLIAIVGRPNVGKSTLYNRLVGGRP-ALVHDTPGLTRDRRYGAFSYMG------HRLRLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYL-SERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G P+ + G I R + V ++D G+ +D +V S L K Sbjct: 57 DTGGL----DPEAAKEVIGAGIHRQADAALQEANAVLFVLDATAGITPLDHEVASKLRKL 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + K+D L + +V P S+ +G++ + +A++ Sbjct: 113 DKPLLVCANKVDHAKREVLTAEL---------FALGLGDVYPVSATHGRGVDDMLEALVA 163 Query: 209 TIN 211 T+ Sbjct: 164 TLG 166 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 15/186 (8%) Query: 24 LPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNN 82 +P P +A G+ N GKSSL+N LV + + + PG T + + Sbjct: 235 VPGVDVPLRVAMLGKPNAGKSSLVNRLVGSER-SLVHHQPGTTMDPV------DTPFEFA 287 Query: 83 LPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVF 142 + LVD G + + + +S+ V L+ID + G + D + Sbjct: 288 GRSYVLVDTAGIRRRARVEAETEKIAVSMA--ISQIERADIVVLVIDGKLGPSEQDARLA 345 Query: 143 SFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIE 200 ++ + + K+D LS A K K + + + ++ ++ S+++ G+ Sbjct: 346 GLVEDSGRGLVVAVNKVDLLSGVGAG---SKVKSALSDTLHFLSYAPMVLVSALRGDGVA 402 Query: 201 VLRKAI 206 L + Sbjct: 403 DLLSTV 408 >gi|72383562|ref|YP_292917.1| GTP-binding protein EngA [Prochlorococcus marinus str. NATL2A] gi|123620367|sp|Q46H20|DER_PROMT RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|72003412|gb|AAZ59214.1| Small GTP-binding protein protein domain:GTP-binding protein [Prochlorococcus marinus str. NATL2A] Length = 456 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 20/189 (10%) Query: 21 IGLLPKAGPPEI-------AFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + L P E+ A GR NVGKSSL+N + A S+ G T+ Sbjct: 162 VNLFPSKDLDEVSDSPVQLAIIGRPNVGKSSLLNSICGETR-AIVSSIRGTTRDTI---- 216 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + + + LVD G R+ + +G I R L+ID G Sbjct: 217 --DTRITHQGKEWKLVDTAGIRRRRSVNYGPEFFG--INRSFKAIERSDVCVLVIDALDG 272 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPT 191 V + DQ + ++++ + IV+ K D + T+ + IR+ Y ++I T Sbjct: 273 VTEQDQRLAGRIEQEGRACLIVINKWDAVEKD--SHTMSAMEKDIRSKLYFLDWAQMIFT 330 Query: 192 SSVKRKGIE 200 S+V + +E Sbjct: 331 SAVTGQRVE 339 Score = 97.5 bits (242), Expect = 9e-19, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 65/184 (35%), Gaps = 25/184 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + A + PG T+ + + + + Sbjct: 3 LPVVAIIGRPNVGKSTLVNRLC-QSREAIVHDEPGVTRD------RTYQDGFWRDRDFKV 55 Query: 89 VDMPGYGYARAPK---KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G + + + + + +++D + G+ D+ + FL Sbjct: 56 VDTGGLVFDDDSEFLPEIREQANLALEE-------AVVALVIVDGQEGITTADESIAEFL 108 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ +V+ K + + + + E P S++ G L Sbjct: 109 RSRSGKTLVVVNKC--------ESPEQGLAMAAQFWKLGLGEPYPISAIHGVGTGDLLDQ 160 Query: 206 ILET 209 ++ Sbjct: 161 VVNL 164 >gi|194334612|ref|YP_002016472.1| GTP-binding protein EngA [Prosthecochloris aestuarii DSM 271] gi|238693304|sp|B4S433|DER_PROA2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|194312430|gb|ACF46825.1| small GTP-binding protein [Prosthecochloris aestuarii DSM 271] Length = 436 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 12/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +A GR NVGKSS +N L+ SN PG T+ + K N Sbjct: 173 EDDSIRLAIIGRPNVGKSSFVNALLGTNRN-IVSNKPGTTRDAI------DTRFKRNGRE 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G ++ + L ER + V LID G+++ D + Sbjct: 226 IVLIDTAGLRKRARIDAGIEFYSSLRTERAIERCDVALV--LIDAEQGLEKQDMKIIEMA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ +++ K D + + L + + S++ +K L +A Sbjct: 284 AERKKGVLLLVNKWDLIEKDSKTSKLYSDRMYDDMGNLGWIPIQFISAMTKKN---LYRA 340 Query: 206 ILETIN 211 I ++ Sbjct: 341 IDAALD 346 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 23/182 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + ++K+ A + PG T+ + + ++ Sbjct: 3 PLVALVGRPNVGKSTLFNRITHQKS-AIVDSTPGVTRD------RHIMPAEWIGKEFLVM 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK-- 147 D GY + ++ + L+ + L+D R G+ +D D+ L + Sbjct: 56 DTGGYC-----HDSDGISKAMLEQTLTAIGEADVIIFLVDVRSGLTYLDLDMAKLLKRDF 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + K+ L R P I S+ G+ L A++ Sbjct: 111 NDKPVYFAVNKV-------ESPQLAYEGESFRKTGFTEPWFI--SARDGSGVADLLDAVV 161 Query: 208 ET 209 ++ Sbjct: 162 DS 163 >gi|315604206|ref|ZP_07879272.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 180 str. F0310] gi|315313912|gb|EFU61963.1| ribosome-associated GTPase EngA [Actinomyces sp. oral taxon 180 str. F0310] Length = 512 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 70/184 (38%), Gaps = 21/184 (11%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 AG P +A GR NVGKS+L+N ++ R+ A + PG T+ + + Sbjct: 74 AGLPVLAVVGRPNVGKSTLVNRILGRRE-AVVQDTPGVTRDRVSY------PAEWAGRNF 126 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G+ + I L+ V L++D GV D+ + L Sbjct: 127 TLVDTGGWEIDVKGLDRSVAEQAEIAVDLA-----DAVVLVLDATVGVTASDERIVEMLR 181 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + K+D + QE + E P S++ +G L + Sbjct: 182 SKDKPIILAANKVD----SALQEADAAY-----LWSLGLGEPHPISALHGRGTGDLLDVV 232 Query: 207 LETI 210 +ET+ Sbjct: 233 METL 236 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 9/163 (5%) Query: 16 RGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKD 75 LP GP +A GR NVGKSSL+N L + + G T+ Sbjct: 238 TESSVASALPVGGPRRVALVGRPNVGKSSLLNALAGGHRVV-VNELAGTTRDPV------ 290 Query: 76 FSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVK 135 ++ + VD G D + + + + +LID + Sbjct: 291 DELVELDSRQWWFVDTAGIRRKMHRTTGADYYASIRTQ--AAIEKAEVALVLIDGAAPLT 348 Query: 136 QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + D V + + +V K D + +E + + + Sbjct: 349 EQDVRVIQQVIDAGRALVVVTNKWDLVDEDRQKEIKSELEREL 391 >gi|190575413|ref|YP_001973258.1| GTP-binding protein Era [Stenotrophomonas maltophilia K279a] gi|226741239|sp|B2FPX8|ERA_STRMK RecName: Full=GTPase Era gi|190013335|emb|CAQ46969.1| putative GTP-binding protein [Stenotrophomonas maltophilia K279a] Length = 298 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 22/182 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV K ++ SN P T+H + + LVD Sbjct: 12 VAVIGRPNVGKSTLTNALVGAK-VSIVSNRPQTTRHRLLGIAT------YPEGQLVLVDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCV---YLLIDCRHGVKQIDQDVFSFLDKK 148 PG K + ++ R + R +L V L+I+ + D F+ L Sbjct: 65 PGLH-----KVQKRAMNRVMNR--AARGSLEGVDAGLLVIEAGR-WDEEDSLAFNVLRDA 116 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +V+ KID+L A + R++ HP S+ KR G+E L + +L+ Sbjct: 117 GIPVVLVVNKIDRLKEKGALLPFLQQVTEGRDFAAVHP----ISAQKRNGLEALVRDVLK 172 Query: 209 TI 210 + Sbjct: 173 LL 174 >gi|167758361|ref|ZP_02430488.1| hypothetical protein CLOSCI_00701 [Clostridium scindens ATCC 35704] gi|167664258|gb|EDS08388.1| hypothetical protein CLOSCI_00701 [Clostridium scindens ATCC 35704] Length = 442 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 13/177 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSS+IN L+ + + S+ G T+ +++ N +D Sbjct: 180 IAIVGKPNVGKSSIINKLLGEQRV-IVSDIAGTTRDAI------DTDIVYNGKEYVFIDT 232 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K+ ++ + I+R ++ V ++ID GV + D + ++ Sbjct: 233 AGLRRKNKIKEELERYS--IIRTVTAVERADVVLIVIDATEGVTEQDAKIAGIAHERGKG 290 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRKAI 206 IV+ K D + +T+ + +R + P E++ S+ + + L I Sbjct: 291 IIIVVNKWDAIEKND--KTMREYDSEVRRVLSFMPYAEIMYVSAETGQRLNKLYDKI 345 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 61/180 (33%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + L+ Sbjct: 4 PVVAIVGRPNVGKSTLFNVLAGG-MISIVKDTPGVTRDRIYADVNWLDK------DFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ + + T + + D R G+ D V L + Sbjct: 57 DTGGI----EPESKDIILSQMREQAQIAIDTADVIIFITDVRQGLVDSDSKVADMLRRSG 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + Y + +P S+ R GI + + E Sbjct: 113 KPVVLVVNKVDNFDK--------FMPDVYEFYNLGIGDPVPISAASRLGIGDMLDQVAEH 164 >gi|83945266|ref|ZP_00957615.1| GTP-binding protein EngA [Oceanicaulis alexandrii HTCC2633] gi|83851436|gb|EAP89292.1| GTP-binding protein EngA [Oceanicaulis alexandrii HTCC2633] Length = 459 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 66/185 (35%), Gaps = 21/185 (11%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K+ P +A GR NVGKS+L N L K LA + PG T+ + + Sbjct: 2 KSTLPALAIVGRPNVGKSTLFNRLAG-KPLAIVDDRPGVTRDRR------EARGRIGDLE 54 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + LVD GY +A + + LID R G+ +D+ L Sbjct: 55 LRLVDTAGYEDDKAGIEARMRAQTE-----AALDEADVCVFLIDGREGITAMDERFAEVL 109 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 K + + K E + + + E +P S+ +G+ L Sbjct: 110 RKSHKPVILAVNKC---------EGAKGEYGAMEAWKLGMGEPVPVSAAHGEGMGDLYAR 160 Query: 206 ILETI 210 + + I Sbjct: 161 LTDAI 165 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 13/179 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A +GR NVGKS+LIN L+ L T G T+ + + Sbjct: 188 EDPPLRLAVAGRPNVGKSTLINALIGEDRL-ITGPEAGLTRDAI------AVEWEWDGQR 240 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L D G ++ L V LL+D ++ D + + Sbjct: 241 VRLHDTAGLRKRGKVDDRLERMSA--ADTLRAIKFAEIVLLLVDAERPFEKQDLTIADRV 298 Query: 146 DKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + +++TK D + E E+ + L+ A +IP SS+ +G+E + Sbjct: 299 VTEGRGLVVLITKWDLIEDKQAKLAELREEFERLLPQIKGA--PLIPISSISGRGLEKI 355 >gi|332975861|gb|EGK12739.1| GTP-binding protein Era [Desmospora sp. 8437] Length = 300 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N ++ +K +A S+ P T++ V + + +D Sbjct: 11 VTLIGRPNVGKSTLLNQVLGQK-VAIMSDKPQTTRNKIRGVYTTEAE------QIIFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + W ++ + + L+D + G+ D+ + L Sbjct: 64 PGI---HKPKSRLGDW--MVQTARETFEEVDVILFLVDAKEGMGPGDRFIMEQLKAVKTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KID++ P T +++ + + EV+P S++ L I Sbjct: 119 VFLVVNKIDQVHPDTLLPLIDRYRKTF-----SFKEVVPVSALYGNNTTTLLDLI 168 >gi|242091397|ref|XP_002441531.1| hypothetical protein SORBIDRAFT_09g028770 [Sorghum bicolor] gi|241946816|gb|EES19961.1| hypothetical protein SORBIDRAFT_09g028770 [Sorghum bicolor] Length = 459 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 18/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+LIN +V +K L+ ++ P T+H + + + L D Sbjct: 123 VAVLGKPNVGKSTLINQMVGQK-LSIVTDKPQTTRHRILGICSE------PEYQIILYDT 175 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV- 150 PG K+ ++ S + CV ++ D ++ID+ + + K + Sbjct: 176 PGVIK----KEMHKLDSMMMKNVRSAIGSADCVLVVADACKAPEKIDEMLEEGVGNKDIA 231 Query: 151 -SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +VL K D + P + LE + T +VIP S+ G++ +++ IL Sbjct: 232 LPVLLVLNKKDLIKPGEIAKKLEWYQK-----FTNVDDVIPISAKFGNGVDDIKEWILSK 286 Query: 210 I 210 + Sbjct: 287 L 287 >gi|88809283|ref|ZP_01124792.1| GTP-binding protein EngA [Synechococcus sp. WH 7805] gi|88787225|gb|EAR18383.1| GTP-binding protein EngA [Synechococcus sp. WH 7805] Length = 455 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 9/176 (5%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P ++A GR NVGKSSL+N + + A S G T+ ++L Sbjct: 175 EEPIQLAIIGRPNVGKSSLLNAICGEQR-AIVSPIRGTTRDTI------DTSLVRENRPW 227 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G R+ + +G I R L+ID GV + DQ + ++ Sbjct: 228 RLVDTAGIRRRRSVSYGPEFFG--INRSFKAIERSDVCVLVIDALDGVTEQDQRLAGRIE 285 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + +V+ K D + + + + Y ++ TS++ + ++ + Sbjct: 286 EDGRACVVVVNKWDAVEKDSHTMPAMEKGLRAKLYFLDWAPMLFTSALTGQRVDSI 341 Score = 99.1 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 65/182 (35%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N L + + A + PG T+ + + + + + Sbjct: 3 RPVVAIIGRPNVGKSTLVNRLCHSRE-AIVHDEPGVTRD------RTYQDGYWSDREFKV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + +++D + GV D+ + FL + Sbjct: 56 VDTGGLVF----DDDSEFLPEIREQAALALEEASVALVIVDGQQGVTASDEAIAEFLRGQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K + + + E P S++ G L +L Sbjct: 112 RCPALLAVNKC--------ESPEQGLAMAAEFWSLGLGEPYPISAIHGAGTAELLDQVLT 163 Query: 209 TI 210 + Sbjct: 164 YL 165 >gi|167569736|ref|ZP_02362610.1| GTP-binding protein EngA [Burkholderia oklahomensis C6786] Length = 445 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 +IA GR NVGKS+L+N L+ + + PG T+ + + + N L Sbjct: 179 GIKIAIVGRPNVGKSTLVNTLIGEDRV-IAFDMPGTTRDSIY------VDFERNGKRYTL 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 232 IDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQ 289 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D L P + ++ A I S+ ++ GI L +++ + Sbjct: 290 GRALVVGVNKWDGLDPHVRERAKADLARKLKFLDFAKSHFI--SAAEKTGIGPLMRSVDD 347 Query: 209 T 209 Sbjct: 348 A 348 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGARPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVASDFYELGLGDPRAISAAHGDGV 152 >gi|227822913|ref|YP_002826885.1| GTP-binding protein EngA [Sinorhizobium fredii NGR234] gi|254783163|sp|C3MG60|DER_RHISN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|227341914|gb|ACP26132.1| GTP-binding protein, essential for cell growth [Sinorhizobium fredii NGR234] Length = 476 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 61/180 (33%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ + K ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGDAKLVDLKFRIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + W +ID + G+ D+ + L ++ Sbjct: 58 AGLEQSAPDSLQGRMWAQTE----QAIDEADLSLFVIDAKAGLTPADETLAEMLRRRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + E P S+ +G+ LR AI+ + Sbjct: 114 VIVVANKS---------EARGSDGGFYDAFTLGLGEPCPISAEHGQGMLDLRDAIVAALG 164 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 13/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K P +A GR N GKS+LIN + L T G T+ + Sbjct: 201 KTKPLRVAIVGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSI------SVEWEWRGRT 253 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + + D G ++ ++ + L V ++ D ++ D + + Sbjct: 254 IKMFDTAGMRRKAKVQEKLEKLS--VADALRAIRFAETVVIIFDATIPFEKQDLQIVDLV 311 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 ++ + + K D + Q L + +P S G++ L Sbjct: 312 LREGRAAVLAFNKWDLV--EDWQAVLADLREKTERLLPQARGIRAVPISGHTGYGLDRLM 369 Query: 204 KAILET 209 +AI+ET Sbjct: 370 QAIIET 375 >gi|329946748|ref|ZP_08294160.1| ribosome biogenesis GTPase Der [Actinomyces sp. oral taxon 170 str. F0386] gi|328526559|gb|EGF53572.1| ribosome biogenesis GTPase Der [Actinomyces sp. oral taxon 170 str. F0386] Length = 719 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 23/186 (12%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G P +A GR NVGKS+L+N ++ R+ A + PG T+ + + + Sbjct: 279 EPGLPVLAVVGRPNVGKSTLVNRVLGRRE-AVVQDTPGVTRDRVSYPAEWAGRRFTIVDT 337 Query: 86 MAL-VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+ G A A + V V L++D + G+ + D V Sbjct: 338 GGWEVDVAGLDAAVATQAEVAV------------EMADAVLLVVDAQVGITETDARVVRM 385 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + K+D + TL + E P S++ +G + Sbjct: 386 LRRSGKPVVLAANKVDSPAQEGDAATL---------WNLGLGEPFPVSALHGRGSGEVLD 436 Query: 205 AILETI 210 A++E + Sbjct: 437 AVMEVL 442 Score = 84.8 bits (209), Expect = 7e-15, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 56/155 (36%), Gaps = 9/155 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ +A GR NVGKSSL+N + R+ + + G T+ ++ + Sbjct: 453 PEGDLHRVALVGRPNVGKSSLLNSIAGRERVV-VNETAGTTRDPV------DEIIELDGR 505 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G + D + L + V +L+D + + D V Sbjct: 506 QWVFVDTAGIRRRVKQSRGADYYAVLRTQ--GAIDKAEVVVVLLDASEPISEQDVRVVQQ 563 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + + +V K D + + L + ++ + Sbjct: 564 VVDAGRALVLVNNKWDLVDEERQKMLLWEVEHDLA 598 >gi|326773386|ref|ZP_08232669.1| ribosome-associated GTPase EngA [Actinomyces viscosus C505] gi|326636616|gb|EGE37519.1| ribosome-associated GTPase EngA [Actinomyces viscosus C505] Length = 719 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 23/186 (12%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G P +A GR NVGKS+L+N ++ R+ A + PG T+ + + + Sbjct: 279 EPGLPVLAVVGRPNVGKSTLVNRVLGRRE-AVVQDTPGVTRDRVSYPAEWAGRRFTIVDT 337 Query: 86 MAL-VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD+ G A A + V V L++D + G+ + D V Sbjct: 338 GGWEVDVAGLDAAVATQAEVAV------------EMADAVLLVVDAQVGITETDARVVRM 385 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + K+D + TL + E P S++ +G + Sbjct: 386 LRRSGKPVVLAANKVDSPAQEGDAATL---------WNLGLGEPFPVSALHGRGSGEVLD 436 Query: 205 AILETI 210 A++E + Sbjct: 437 AVMEVL 442 Score = 95.2 bits (236), Expect = 5e-18, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 9/155 (5%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P+ IA GR NVGKSSL+N + ++ + + G T+ ++ + Sbjct: 453 PEGDLHRIALVGRPNVGKSSLLNSIAGQERVV-VNETAGTTRDPV------DEIIELDGR 505 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 VD G + D + L + +L+D + + D V Sbjct: 506 QWVFVDTAGIRRRVKQSRGADYYAVLRTQ--GAIDKAEVAVVLLDASEPISEQDVRVVQQ 563 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 + +V K D + + L + ++ + Sbjct: 564 AVDAGRALVLVNNKWDLVDEERQKMLLWEVEHDLA 598 >gi|306842332|ref|ZP_07474991.1| small GTP-binding protein [Brucella sp. BO2] gi|306287548|gb|EFM59007.1| small GTP-binding protein [Brucella sp. BO2] Length = 483 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV RK LA + PG T+ + + ++D Sbjct: 5 LAIVGRPNVGKSTLFNRLVGRK-LALVDDLPGVTRDRRIHDARLYDL------KFQVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + + S V +ID + G+ D + + Sbjct: 58 AGLEEAANDSLEA----RMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + E P S+ +G+ LR AI+E + Sbjct: 114 VVLVANKA---------EARGSEAGMYDAFQLGLGEPCPISAEHGQGMPDLRDAIVELLG 164 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 13/194 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 EI P IA GR N GKS+LIN ++ L T G T+ + Sbjct: 200 AEEIPAYDATKPLRIAIVGRPNAGKSTLINTMLGEDRL-LTGPEAGITRDSI------SA 252 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + + + L D G ++ ++ + L V +++D ++ Sbjct: 253 DWEWHGRKIKLFDTAGMRRKARVQEKLEKLS--VADGLRAIRFAEVVIIVLDATIPFEKQ 310 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + ++ + I K D + + EKT L+ +P S + Sbjct: 311 DLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTARLLPQVRGLRA--VPISGER 368 Query: 196 RKGIEVLRKAILET 209 +GI+ L + +++T Sbjct: 369 GQGIDKLMENVVKT 382 >gi|254884683|ref|ZP_05257393.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319642352|ref|ZP_07997007.1| hypothetical protein HMPREF9011_02607 [Bacteroides sp. 3_1_40A] gi|254837476|gb|EET17785.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317386012|gb|EFV66936.1| hypothetical protein HMPREF9011_02607 [Bacteroides sp. 3_1_40A] Length = 396 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 22/191 (11%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P A I G+ N GKSSLIN L + + A S+ PG T + Sbjct: 2 SLNNTPAANRLHIVLFGKRNSGKSSLINALTGQ-DTALVSDIPGTTTD----AVSKAMEI 56 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 ++ P + +D PG+ + I R L LL C G + ++ Sbjct: 57 QHIGPCL-FIDTPGFDDEGELGEMR------ITRTLKAIERTDIALLL--CEDGNCEDEK 107 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L+K+ + ++L K D ++ + T+ I +P +I S+ ++ GI Sbjct: 108 QWMEQLNKRNIPVILILNKAD------IRKDIASTRDRIEKECGQNPLII--SAKEQTGI 159 Query: 200 EVLRKAILETI 210 E + +AILE + Sbjct: 160 EKILQAILEKL 170 >gi|148559467|ref|YP_001258406.1| GTP-binding protein EngA [Brucella ovis ATCC 25840] gi|166224311|sp|A5VNV9|DER_BRUO2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|148370724|gb|ABQ60703.1| GTP-binding protein [Brucella ovis ATCC 25840] Length = 483 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV RK LA + PG T+ K + ++D Sbjct: 5 LAIVGRPNVGKSTLFNRLVGRK-LALVDDLPGVTRDRRIHDAKLYDL------KFQVIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + + S V +ID + G+ D + + Sbjct: 58 AGLEEAANDSLEA----RMRAQTEAAISEADAVLFVIDAKAGITPADSTFAEAVRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + E P S+ +G+ LR AI+E + Sbjct: 114 VVLVANKA---------EARGSEAGMYDAFQLGLGEPCPISAKHGQGMPDLRDAIVELLG 164 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 13/194 (6%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 EI P IA GR N GKS+LIN ++ L T G T+ + Sbjct: 200 AEEIPAYDATKPLRIAIVGRPNAGKSTLINTMLGEDRL-LTGPEAGITRDSI------SA 252 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 + + + + L D G ++ ++ + L V +++D ++ Sbjct: 253 DWEWHGRKIKLFDTAGMRRKARVQEKLEKLS--VADGLRAIRFAEVVIIVLDATIPFEKQ 310 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVK 195 D + + ++ + I K D + + EKT L+ +P S + Sbjct: 311 DLQIADLIIREGRAPVIAFNKWDLIEDRQMVLADLYEKTARLLPQVRGLRA--VPISGER 368 Query: 196 RKGIEVLRKAILET 209 +GI+ L + +++T Sbjct: 369 GQGIDKLMENVVKT 382 >gi|54310186|ref|YP_131206.1| GTP-binding protein Era [Photobacterium profundum SS9] gi|46914627|emb|CAG21404.1| putative GTP-binding protein Era [Photobacterium profundum SS9] Length = 301 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 20/181 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N LV +K L+ TS P T+H V + +D Sbjct: 10 IAIVGRPNVGKSTLLNRLVGQK-LSITSRKPQTTRHRIMGVDT------RDGYQAVFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S + + V L+D D+ V + L K + Sbjct: 63 PGLHI-----EEKRTINRLMNRAASSSLTDVELVLFLVDGTM-WTADDEMVLNKLKKSEL 116 Query: 151 SYQIVLTKIDKLS-PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +++ K+D + L+ + +V+P S+ K ++ + K + Sbjct: 117 PTVLLINKVDNVKEKGDLFPHLDALSKKM-----DFVDVVPISAKKGTNVDAVEKIVRAH 171 Query: 210 I 210 I Sbjct: 172 I 172 >gi|167562554|ref|ZP_02355470.1| GTP-binding protein EngA [Burkholderia oklahomensis EO147] Length = 445 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 11/181 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 +IA GR NVGKS+L+N L+ + + PG T+ + + + N L Sbjct: 179 GIKIAIVGRPNVGKSTLVNTLIGEDRV-IAFDMPGTTRDSIY------VDFERNGKRYTL 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + +V+ L S V LL+D R + D + F+ ++ Sbjct: 232 IDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDARQDISDQDAHIAGFVVEQ 289 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K D L P + ++ A I S+ ++ GI L +++ + Sbjct: 290 GRALVVGVNKWDGLDPHVRERAKADLARKLKFLDFAKSHFI--SAAEKTGIGPLMRSVDD 347 Query: 209 T 209 Sbjct: 348 A 348 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 62/170 (36%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGVRPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K E ++ T Y + S+ G+ Sbjct: 112 RPIFLVVNKA---------EGMKYTAVASDFYELGLGDPRAISAAHGDGV 152 >gi|15606936|ref|NP_214317.1| GTP binding protein Era [Aquifex aeolicus VF5] gi|8134426|sp|O67749|DER_AQUAE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|2984183|gb|AAC07715.1| GTP binding protein Era [Aquifex aeolicus VF5] Length = 433 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 71/179 (39%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L N ++ K A + PG T+ K + + +VD Sbjct: 5 VVIIGRPNVGKSTLFNRIIG-KRYAIVEDYPGVTRD------KIEAKAEWAGKEFIIVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + ++ E + ++D + G+ +DQ++ +L A Sbjct: 58 GGLVPETKDELIREV-KKVVE---QEIPKADVILFVVDGKEGLNPLDQEIAKYLYPYADK 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID L + K + Y ++ P S+ KG+ L +++ + Sbjct: 114 VLLVVNKID---------NLRQEKNVAEFYTLGFEKIFPISAQHGKGVGELLDEVVKYL 163 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 12/178 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 ++AF GR NVGKSSL+N ++ + S G T+ + L Sbjct: 174 GIKVAFIGRPNVGKSSLVNAIL-KDERVIVSPIAGTTRDAIEI------PFRWKDKNFIL 226 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + ++ + + R L L+ID G + D+ + ++++ Sbjct: 227 IDTAGVRRPSNVEYGIEFYS--VGRSLKAIDLADVCCLVIDASEGPTRQDKRLGGLIERR 284 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IV K+D +SP + +E + + + ++ T + K KG+E L I Sbjct: 285 YKGCVIVANKMD-ISPWSEEELEGIIRKEL--FFLDFAPIVFTVATKGKGVEELLNWI 339 >gi|303239164|ref|ZP_07325693.1| small GTP-binding protein [Acetivibrio cellulolyticus CD2] gi|302593209|gb|EFL62928.1| small GTP-binding protein [Acetivibrio cellulolyticus CD2] Length = 407 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 24/194 (12%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + P IA GR N GKS+LIN L + ++A SN PG T + + Sbjct: 1 MNNTPVGNRLHIAIFGRRNAGKSTLINALTGQ-DIAVVSNVPGTTTDPVY-----KTMEL 54 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVR--YLSERSTLRCVYLLIDCRHGVKQID 138 L + ++D G +V G L + Y R T ++D G+ + D Sbjct: 55 LPLGPVVIIDTAGI-------DDVGDLGNLRMEKTYDVLRKT-NFAIFVVDADEGITEFD 106 Query: 139 QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKG 198 + + V+ VL K DK+ + +++ + + + S+ + G Sbjct: 107 IKFIEEIKSREVAVVAVLNKSDKIKTEQTK--IDEYRKKL------GIPICEISAKSKSG 158 Query: 199 IEVLRKAILETINY 212 I+ L++ I + + Sbjct: 159 IDELKQLIAKHAKF 172 >gi|89094543|ref|ZP_01167481.1| GTP-binding protein Era [Oceanospirillum sp. MED92] gi|89081142|gb|EAR60376.1| GTP-binding protein Era [Oceanospirillum sp. MED92] Length = 311 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 15/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K L+ TS P T+H + + + VD Sbjct: 21 VAIVGRPNVGKSTLMNHILGQK-LSITSKKPQTTRHQIMGIKTE------GDLQIVYVDT 73 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG K L + + ++D R + DQ V + Sbjct: 74 PGLHKDDGKKALNRYMNKAASDALR---DVDLIVFIVD-RTAWTEEDQMVLDKVKHARCP 129 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D+L + L + + E+IP S+ + +E L + I + Sbjct: 130 VILAVNKVDQLKDKAS--LLPQMQSHSER--MEFAEMIPLSAKQGHNVEQLEELIASYM 184 >gi|150002947|ref|YP_001297691.1| putative GTP-binding protein, putative GTPase [Bacteroides vulgatus ATCC 8482] gi|149931371|gb|ABR38069.1| putative GTP-binding protein, putative GTPase [Bacteroides vulgatus ATCC 8482] Length = 396 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 22/191 (11%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P A I G+ N GKSSLIN L + + A S+ PG T + Sbjct: 2 SLNNTPAANRLHIVLFGKRNSGKSSLINALTGQ-DTALVSDIPGTTTD----AVSKAMEI 56 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 ++ P + +D PG+ + I R L LL C G + ++ Sbjct: 57 QHIGPCL-FIDTPGFDDEGELGEMR------ITRTLKAIERTDIALLL--CEDGNCEDEK 107 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L+K+ + ++L K D ++ + T+ I +P +I S+ ++ GI Sbjct: 108 QWMEQLNKRNIPVILILNKAD------IRKDIASTRDRIEKECGQNPLII--SAKEQTGI 159 Query: 200 EVLRKAILETI 210 E + +AILE + Sbjct: 160 EKILQAILEKL 170 >gi|241205814|ref|YP_002976910.1| GTP-binding protein EngA [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859704|gb|ACS57371.1| small GTP-binding protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 474 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ + + ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGDARLMGLTFTIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A A G + + + ++D + G+ +D D+ L ++ Sbjct: 58 AGLEEADAES----LQGRMRAQTEAAIDEADLSLFVVDAKSGLTPVDTDLAEMLRRRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E Y E P S+ +G+ LR AI+ I Sbjct: 114 VVLVANKS---------EARGSDSGFYDAYTLGLGEPTPISAEHGQGMLDLRDAIVAAIG 164 Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 64/186 (34%), Gaps = 13/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR N GKS+LIN + L T G T+ V D+ Sbjct: 200 ETKPLRVAIVGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSIS-VEWDWRG-----RT 252 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + + D G + ++ + L V ++ D ++ D + + Sbjct: 253 IKMFDTAGMRRKARVIEKLEKLS--VADALRAIRFAETVVIVFDATIPFEKQDLQIVDLV 310 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 ++ + + K D + Q L + +P S G++ L Sbjct: 311 LREGRAAVLAFNKWDMI--EDRQAVLADLREKTDRLLPQARGIRAVPISGQTGWGLDKLM 368 Query: 204 KAILET 209 +AI++T Sbjct: 369 QAIIDT 374 >gi|118602671|ref|YP_903886.1| small GTP-binding protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567610|gb|ABL02415.1| small GTP-binding protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 465 Score = 111 bits (279), Expect = 5e-23, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN ++ ++ + + PG T + ++ +D Sbjct: 181 VAVLGRPNVGKSTLINRILGQERV-LVMDFPGTTHDSIYI------PFEHEGQKYTFIDT 233 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G R+ + V+ + I++ + V L++D + GV + D + + K + Sbjct: 234 AGIRRKRSTHEKVEIFS--IIKAIDALERAHVVILVLDAQVGVIEQDATLLGMIIDKGKA 291 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 IV+ K D L QE K K I+ + V S++ G+ L I ++ Sbjct: 292 LLIVINKWDGLDDYQKQEV--KRKLEIKLSFINYASVHYISALHAFGVGKLFTPINQS 347 Score = 89.1 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 42/176 (23%), Positives = 67/176 (38%), Gaps = 21/176 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P I GR NVGKS+L N L + + A S+ G T+ + L N+ A Sbjct: 2 GLPIICLVGRPNVGKSTLFNRLSHSRQ-ALVSDFEGLTRDRQYAEV----LLDNDTQTFA 56 Query: 88 -LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + L+ +Y ++ R GV +D ++ S L Sbjct: 57 TIIDTGGLTNKNNLVDSSIQGQV-----LNALEESDIIYFIVSSRDGVIGLDLEIVSRLR 111 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 K + +V K + L+P A E + E + S+ +GI L Sbjct: 112 KLKKNIILVCNKAEGLNPALAAE----------FFELGLGEPMLISAEHGQGIADL 157 >gi|323141760|ref|ZP_08076630.1| ribosome biogenesis GTPase Der [Phascolarctobacterium sp. YIT 12067] gi|322413749|gb|EFY04598.1| ribosome biogenesis GTPase Der [Phascolarctobacterium sp. YIT 12067] Length = 442 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 11/186 (5%) Query: 22 GLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKN 81 G L + ++A GR NVGKSS+ N LV + + S+ G T+ + + Sbjct: 171 GDLEEEDEIKVALIGRPNVGKSSIFNALVGEER-SIVSDIAGTTRDAI------DTPVVR 223 Query: 82 NLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 N +D G + ++ + + R L V ++ D GV + D+ + Sbjct: 224 NGQKYLFIDTAGMRRKAKVDEPIEKYSVM--RSLRAVDRSDVVLMVFDAVEGVTEQDKRI 281 Query: 142 FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIE 200 + + + +V+ K D L TL T+ L + + V+ S+V ++ I Sbjct: 282 VGYAHEAGKAVILVVNKWD-LYEKDNSSTLRYTETLRKELVFLQYAPVVFVSAVTKQRIH 340 Query: 201 VLRKAI 206 L + I Sbjct: 341 RLPEVI 346 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 63/181 (34%), Gaps = 26/181 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L NI N ++ + PG T+ + ++ + + +V Sbjct: 4 PIVAIVGRPNVGKSTLFNIFAN-SRISIVEDTPGVTRDR-LYATAEWLDHE-----FMMV 56 Query: 90 DMPGYGYARAPK---KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G A I + + D R G+ D DV L Sbjct: 57 DTGGIEIMNADAIAVSIRQQAQIAI-------KEADVILFVCDARAGITTEDADVARLLR 109 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K D SP T E Y + I S+ G+ L A+ Sbjct: 110 QSKKPIVLAVNKAD--SPKQEMNTFE-------FYNLGIGDPIAVSASNHLGLGDLLDAV 160 Query: 207 L 207 + Sbjct: 161 V 161 >gi|237747713|ref|ZP_04578193.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13] gi|229379075|gb|EEO29166.1| GTP-binding protein engA [Oxalobacter formigenes OXCC13] Length = 446 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 75/176 (42%), Gaps = 11/176 (6%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKS++IN L+ + + + PG T+ + + LVD Sbjct: 183 KLAIVGRPNVGKSTMINALLGEERV-IAFDLPGTTRDAIEI------PFERDGKQYTLVD 235 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + +V+ L S V LL+D + + + D + F+ + Sbjct: 236 TAGLRKRGKVFQAIEKFS--VVKTLQAISEANVVLLLMDAQQDISEQDAHIAGFVLESGR 293 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + K D L +E + + + + + + S++K GI L ++I Sbjct: 294 ALVVGINKWDGLDQDKRKEIKSEVERKL--HFLSFAKFHYVSALKSTGISALMRSI 347 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 19/181 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L R A ++ PG T+ + + + ++ Sbjct: 3 PVIALVGRPNVGKSTLFNRLT-RSRAALVADYPGLTRD------RHYGEGRMGDRPFLVI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ K+ V + + + V ++D R G+ D+ + +L K Sbjct: 56 DTGGFEP--VVKEGV--MQEMAKQTKQAVAEADVVIFIVDGRQGITPHDKAITDYLRKSG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K + + P VI SS G+ L L+ Sbjct: 112 RPVILAVNKA------EGMKYTAVVADFYELGLGSDPLVI--SSAHGDGVHTLLDEALKM 163 Query: 210 I 210 + Sbjct: 164 V 164 >gi|295398957|ref|ZP_06808939.1| ribosome-associated GTPase EngA [Geobacillus thermoglucosidasius C56-YS93] gi|294978423|gb|EFG54019.1| ribosome-associated GTPase EngA [Geobacillus thermoglucosidasius C56-YS93] Length = 436 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 71/180 (39%), Gaps = 13/180 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + + GR NVGKSSL+N ++ + + S+ G T+ + Sbjct: 172 EEDVIKFCLIGRPNVGKSSLVNAILGEERV-IVSDIAGTTRDAV------DTTFVREGQE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G +N + + L R L V ++++ G+ + D+ + + Sbjct: 225 YVIIDTAGMRKRGKIYENTEKYSVL--RALKAIERSDVVLVVLNAEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +TL + + IR++ + +I S+ ++ + L Sbjct: 283 HEAGRGVIIVVNKWDAIEKDD--KTLIEFERKIRDHFPFLDYAPIIFVSAKTKQRLHKLL 340 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 21/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + ++ N K L+ Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-ISIVEDVPGVTRDRI-YSSAEWLNHK-----FYLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P I + + + R GV D++V L + Sbjct: 57 DTGGIDIGDEPLLVQIRQQAEI-----AIDEADVIIFMTNGRDGVTAADEEVAKILHRSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + KID E + Y + P S G+ L A+ Sbjct: 112 KPVVLAVNKID---------NPEMRDLIYDFYALGFGDPYPISGAHGTGLGDLLDAVA 160 >gi|57233850|ref|YP_182104.1| GTP-binding protein EngA [Dehalococcoides ethenogenes 195] gi|57224298|gb|AAW39355.1| GTP-binding protein [Dehalococcoides ethenogenes 195] Length = 441 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 65/185 (35%), Gaps = 20/185 (10%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA GR NVGKS+L+N L KNLA T + PG T+ F Sbjct: 2 NNTTPIIAIVGRQNVGKSTLLNRLA-HKNLAITEDLPGTTRDRLFTTVSWLD------RR 54 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + +VD G +++ I L V L++D + G+ D ++ + Sbjct: 55 LIMVDTGGLDPDL---ESIIGQQVNIQISL-AIKEADLVLLVVDVKAGLITPDYEMADII 110 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + +V K D L Y E S+ GI L Sbjct: 111 RRTGKPVILVANKADNLKMGQ---------EAAEFYSLGFGEPSVISAFHGSGISDLMDR 161 Query: 206 ILETI 210 +LE + Sbjct: 162 VLEEL 166 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + ++A GR+NVGKS+L+N + ++ + SN PG T+ + L N Sbjct: 176 EDNSVKLALVGRTNVGKSTLLNTFMGQER-SIVSNIPGTTRDAI------DTPLNFNGTN 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G + V+ + L R L V L++D V D + ++ Sbjct: 229 VLLIDTAGIRRRGKVESGVEKYSVL--RALKAVDRADIVLLVMDTEELVTAQDTHIAGYV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 A I+L K D E + + + + ++ S +G++ + Sbjct: 287 RDTAKGIIIILNKWDLGKGQDKAEVTQTIQSRFKFLD--YAPILFVSGKTGRGVDTI 341 >gi|317403342|gb|EFV83855.1| GTP-binding protein engA [Achromobacter xylosoxidans C54] Length = 451 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 75/180 (41%), Gaps = 11/180 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 ++A GR NVGKS+LIN L+ + + + PG T+ + + + Sbjct: 183 DHRIKLAIVGRPNVGKSTLINTLMGEERV-IAFDMPGTTRDAIEI------DFERDGRRY 235 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 L+D G + V+ + +++ L V L++D + + + D + F+ Sbjct: 236 TLIDTAGLRKRGKVFEAVEKFS--VIKTLQAIEASNVVLLMLDAQTEISEQDAHIAGFVL 293 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + + + K D L + + +R + V S+++ +GI+ L K++ Sbjct: 294 ETGRAVVVAVNKWDGLDGEEKERIEREFMRKLR--FLSFARVHTISALRGQGIKPLLKSV 351 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 27/185 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L R A ++ G T+ + + + ++ Sbjct: 5 PVVALVGRPNVGKSTLFNRLT-RSRAALVADFSGLTRD------RHYGEGRVGEIPFIVI 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTL---RCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ G L+ R + V L+D R G+ D ++ + L Sbjct: 58 DTGGFEPVAKD-------GILLEMARQTRQAIAEADVVVFLVDARAGLNAHDHEIATLLR 110 Query: 147 KKA-VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 K + + K E + + + + P S+ GI L + Sbjct: 111 KSGQQRVLLAVNKA---------EGMGAGAAIAEFHELGLGQPYPISAAHGDGIVDLIEL 161 Query: 206 ILETI 210 L+ + Sbjct: 162 ALQDL 166 >gi|315656788|ref|ZP_07909675.1| ribosome-associated GTPase EngA [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492743|gb|EFU82347.1| ribosome-associated GTPase EngA [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 523 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 26/194 (13%) Query: 20 EIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 + LP P +A GR NVGKS+L+N ++ R+ A + PG T+ + + Sbjct: 76 DDAGLPAVPNWPTLAVVGRPNVGKSTLVNRILGRRE-AVVLDEPGVTRDRVTY------D 128 Query: 79 LKNNLPAMALVDMPG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 N LVD G G + + D I ++D G Sbjct: 129 AHWNGRNFHLVDTGGWDVGVSGLDRAVADQAEIAIDL-------ADAALFVVDANVGATA 181 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + L + +V K+D + QE + + P S++ Sbjct: 182 TDERLMKLLRRAGKPVLLVANKVD----SERQEA-----DAAALWNLGMGQPYPISALHG 232 Query: 197 KGIEVLRKAILETI 210 +G L AIL+ + Sbjct: 233 RGTGDLLDAILQVL 246 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 11/171 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKSSL+N L A S PG T+ L+ + Sbjct: 258 EDSTPRVALVGRPNVGKSSLLNSLSG-AGRAVVSEVPGTTRDPV------DEVLELDGQQ 310 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G D + L + + +L+D + + D V + + Sbjct: 311 WVFVDTAGVRRRVKRSVGADYYSVLRTQ--AAIENADVALVLLDGGEPLTEQDVRVVNQV 368 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + + +V K D + Q L+ + + + P+ I S+ Sbjct: 369 IEAGRALVLVNNKWDLV-DEYRQGELKYEQESDLAHVSWAPK-INISAKTG 417 >gi|304389543|ref|ZP_07371506.1| ribosome-associated GTPase EngA [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304327353|gb|EFL94588.1| ribosome-associated GTPase EngA [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 523 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 26/194 (13%) Query: 20 EIGLLPK-AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSN 78 + LP P +A GR NVGKS+L+N ++ R+ A + PG T+ + + Sbjct: 76 DDAGLPAVPNWPTLAVVGRPNVGKSTLVNRILGRRE-AVVLDEPGVTRDRVTY------D 128 Query: 79 LKNNLPAMALVDMPG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQ 136 N LVD G G + + D I ++D G Sbjct: 129 AHWNGRNFHLVDTGGWDVGVSGLDRAVADQAEIAIDL-------ADAALFVVDANVGATA 181 Query: 137 IDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 D+ + L + +V K+D + QE + + P S++ Sbjct: 182 TDERLMKLLRRAGKPVLLVANKVD----SERQEA-----DAAALWNLGMGQPYPISALHG 232 Query: 197 KGIEVLRKAILETI 210 +G L AIL+ + Sbjct: 233 RGTGDLLDAILQVL 246 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 11/171 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKSSL+N L A S PG T+ L+ + Sbjct: 258 EDSTPRVALVGRPNVGKSSLLNSLSG-AGRAVVSEVPGTTRDPV------DEVLELDGQQ 310 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G D + L + + +L+D + + D V + + Sbjct: 311 WVFVDTAGVRRRVKRSVGADYYSVLRTQ--AAIENADVALVLLDGGEPLTEQDVRVVNQV 368 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + + +V K D + Q L+ + + + P+ I S+ Sbjct: 369 IEAGRALVLVNNKWDLV-DEYRQGELKYEQESDLAHVSWAPK-INISAKTG 417 >gi|222632589|gb|EEE64721.1| hypothetical protein OsJ_19577 [Oryza sativa Japonica Group] Length = 423 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 20/182 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+LIN +V +K L+ ++ P T+H + + + L D Sbjct: 128 VAVLGKPNVGKSTLINQIVGQK-LSIVTDKPQTTRHRILGICSE------PEYQIILYDT 180 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFL--DKK 148 PG KK + ++++ + + CV +++D ++ID+ + + Sbjct: 181 PG-----VIKKEMHKLDTMMMKNVRSAVGSADCVLVVVDACKMPEKIDEILEEGVGNKDT 235 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +VL K D + P + LE + T +VIP S+ G++ +++ IL Sbjct: 236 ELPVLLVLNKKDLIKPGEIAKKLEWYQK-----FTNADDVIPISAKFGHGVDDIKEWILS 290 Query: 209 TI 210 + Sbjct: 291 KL 292 >gi|125553352|gb|EAY99061.1| hypothetical protein OsI_21018 [Oryza sativa Indica Group] Length = 423 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 20/182 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+LIN +V +K L+ ++ P T+H + + + L D Sbjct: 128 VAVLGKPNVGKSTLINQIVGQK-LSIVTDKPQTTRHRILGICSE------PEYQIILYDT 180 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFL--DKK 148 PG KK + ++++ + + CV +++D ++ID+ + + Sbjct: 181 PG-----VIKKEMHKLDTMMMKNVRSAVGSADCVLVVVDACKMPEKIDEILEEGVGNKDT 235 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +VL K D + P + LE + T +VIP S+ G++ +++ IL Sbjct: 236 ELPVLLVLNKKDLIKPGEIAKKLEWYQK-----FTNADDVIPISAKFGHGVDDIKEWILS 290 Query: 209 TI 210 + Sbjct: 291 KL 292 >gi|148656272|ref|YP_001276477.1| GTP-binding protein EngA [Roseiflexus sp. RS-1] gi|148568382|gb|ABQ90527.1| small GTP-binding protein [Roseiflexus sp. RS-1] Length = 493 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 22/186 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA-L 88 P +A GR NVGKS+L N L+ + A + PG T+ + + + + L Sbjct: 3 PIVALVGRPNVGKSTLFNRLIGERR-AIVEDIPGTTRDRLYGDTEWNGRVFTVVDTAGLL 61 Query: 89 VD----MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D PG ++ + I + ++D R G+ D V Sbjct: 62 LDEDDLTPGTPQLEIARRVREQAEIAIEE-------ADAIIFIVDSREGLTAADAAVAEV 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + + K D + L+ ++ Y E IP S+ G+ + Sbjct: 115 LRRASKPVVLAANKAD-----NRERALDAVEF----YALNLGEPIPMSAYHGIGVGDVLD 165 Query: 205 AILETI 210 + + + Sbjct: 166 RVTDVL 171 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 13/180 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +IA GR NVGKSSL+N L+ ++ + S+ PG T+ + ++ + Sbjct: 179 DDAAVKIAIVGRPNVGKSSLLNRLIGQER-SVVSDVPGTTRDSI------DTPVEIDGIK 231 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ ++ + + R L LLID GV D + + Sbjct: 232 ALLIDTAGIRRRGKIERGLERYSVM--RALRAIERADVALLLIDATEGVTAQDTHIAGMI 289 Query: 146 DKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + I++ K D + TT + + ++ ++ S+ + ++ + Sbjct: 290 LESLKGVAILVNKWDLVVKDNTTFDAFSRHVREAFK--FISYAPLLFISAKTGQRVDKVL 347 >gi|291087651|ref|ZP_06347028.2| ribosome-associated GTPase EngA [Clostridium sp. M62/1] gi|291074566|gb|EFE11930.1| ribosome-associated GTPase EngA [Clostridium sp. M62/1] Length = 446 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 13/180 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA G+ NVGKSS++N L+ + SN G T+ + + +N Sbjct: 181 RPRIAIVGKPNVGKSSIVNKLLGENRV-IVSNIAGTTRDAV------DTEIVHNGTEYVF 233 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G K+ ++ + I+R ++ V ++ID GV + D + + Sbjct: 234 IDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHDR 291 Query: 149 AVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IV+ K D + E K K ++ P + E + S+ + + L I Sbjct: 292 GKGIIIVVNKWDAIEKNDKTIYEYTNKIKTILSFVP--YAEYVFVSAQTGQRLNKLYDLI 349 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A G NVGKS+L N+L ++ + PG T+ + ++ A L+ Sbjct: 8 PVVAVVGCPNVGKSTLFNVLAGE-MISIVKDTPGVTRDRIY------ADCTWLDKAFTLI 60 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + +T + ++D R G+ D V L K Sbjct: 61 DTGGI----EPDSRDIILAQMREQAEIAIATADVIIFIVDVRQGLTDSDSKVADMLRKSR 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D + + Y + IP S+ R G+ L A++ Sbjct: 117 KPVILAVNKVD--------SFAKFGNDVYEFYNLGIGDPIPISAASRLGLGELLDAVV 166 >gi|134045348|ref|YP_001096834.1| GTP-binding protein [Methanococcus maripaludis C5] gi|132662973|gb|ABO34619.1| GTP-binding protein, HSR1-related protein [Methanococcus maripaludis C5] Length = 227 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 28/201 (13%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P++ GRSNVGKS+ + I+ + R PG T + + ++ Sbjct: 32 DERPKVIVMGRSNVGKSTFVKIVTGKN--VRVGKKPGVTLKITEY----------DMGTY 79 Query: 87 ALVDMPGYGY-ARAPKKNVDSWGGLIVRYLSERST-LRCVYLLIDCR-----------HG 133 LVD+PG+G+ KK + I+ Y+ + + ++D + G Sbjct: 80 ILVDLPGFGFMEGIEKKAQEKIKDQIIDYVEDNKNTIAASIHILDAKSFMDIVERWDNKG 139 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP---TAHPEVIP 190 ID ++ FL++ ++ V+ K+DK+ + L++ + P +P Sbjct: 140 EVPIDLEMADFLEELELNPIFVVNKMDKIKNSEWDNHLDRVSETLGFLPPWRQWLDNFVP 199 Query: 191 TSSVKRKGIEVLRKAILETIN 211 + GI+ ++ I + IN Sbjct: 200 AITRDNYGIDGIKHRINKRIN 220 >gi|238064002|ref|ZP_04608711.1| small GTP-binding protein [Micromonospora sp. ATCC 39149] gi|237885813|gb|EEP74641.1| small GTP-binding protein [Micromonospora sp. ATCC 39149] Length = 466 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 21/186 (11%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLP 84 P P +A GR NVGKS+L+N ++ R+ A + PG T+ + + + + Sbjct: 19 PTGPMPVVAVVGRPNVGKSTLVNRIIGRRQ-AVVEDIPGVTRDRVPY------DAQWSGR 71 Query: 85 AMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 A +VD G+ D + + +T V ++D G +D+ Sbjct: 72 AFTVVDTGGWEP-----DAKDRAAAIAAQAEIAVATADVVLFVVDAMVGSTDVDEAAVKM 126 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + A +V K D T+E + + E P S++ +G L Sbjct: 127 LRRSAKPVILVANKAD-------NATIEMESTSL--WSLGLGEPYPVSALHGRGSGDLLD 177 Query: 205 AILETI 210 IL+ + Sbjct: 178 KILQAL 183 Score = 98.3 bits (244), Expect = 6e-19, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 68/196 (34%), Gaps = 15/196 (7%) Query: 18 VPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 P I GP +A GR NVGKSSL+N + A + G T S Sbjct: 186 APAIVENRPRGPRRVALVGRPNVGKSSLLNRFSGEER-AVVDSVAGTTVDPV------DS 238 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ LVD G + + L S +L+D + + Sbjct: 239 LVEIGGETWQLVDTAGLRKRVGKASGTEYYASLRTA--SAIEAAEVAVVLLDSSEPISEQ 296 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 DQ + S + + + I K D + ++ + +R P A I S+ + Sbjct: 297 DQRILSMVTEAGRALVIAFNKWDLVDGDRRYYLDKEIERELRRIPWALR--INLSAKTGR 354 Query: 198 GIEV----LRKAILET 209 ++ LRKA+ Sbjct: 355 AVDKLAPSLRKALASW 370 >gi|116872893|ref|YP_849674.1| GTP-binding protein Era [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461073|sp|A0AIR3|ERA_LISW6 RecName: Full=GTPase Era gi|116741771|emb|CAK20895.1| GTP-binding protein Era [Listeria welshimeri serovar 6b str. SLCC5334] Length = 301 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 17/173 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ T++ V + + +D Sbjct: 10 VAIVGRPNVGKSTLLNHIIGQK-IAIMSDKAQTTRNKVQGVYT------TDESQIIFIDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + I L+ + +Y +ID G + D+ + L Sbjct: 63 PGI---HKPKHKLGDFMVKIA--LNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQTP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +++ KID +SP + +E+ + L+ E+IP S+++ + L + Sbjct: 118 VFLLINKIDLISPEDLFKLIEQYRELL-----DFEEIIPISALQGNNVPNLLE 165 >gi|193215037|ref|YP_001996236.1| GTP-binding protein EngA [Chloroherpeton thalassium ATCC 35110] gi|238692727|sp|B3QZ96|DER_CHLT3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|193088514|gb|ACF13789.1| small GTP-binding protein [Chloroherpeton thalassium ATCC 35110] Length = 435 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 23/183 (12%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N ++N K +A + PG T+ NF S + +L+ Sbjct: 3 PTVAIVGRPNVGKSTLFNRILN-KRVAIVDDVPGVTRDRNF------SEAEWCGKQFSLI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D GY ++ + L + L++D R G+ ID ++ L K+A Sbjct: 56 DTGGYSRTGDTFSAA-----VLEQSLIALQEANIIILVVDLRTGITDIDLEITELLRKQA 110 Query: 150 --VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + + K+D +E L R + P S++ +G+ L A++ Sbjct: 111 SEKTVFLAVNKVD-------NNLMESDAQLFRKLGLSEPY--FVSALDGRGVAELLDAVI 161 Query: 208 ETI 210 I Sbjct: 162 AHI 164 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 15/185 (8%) Query: 21 IGLLPKAGPPE------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 I +P+ PE + GR NVGKSS +N ++ + ++ PG T+ Sbjct: 161 IAHIPEDDAPESDDTVKLTVIGRPNVGKSSFVNAILGQNRQ-IVTDIPGTTRDAV----- 214 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 S K N L+D G N++ + L ER +L+D G+ Sbjct: 215 -DSRFKRNGQDFLLIDTAGLRRKAKVDDNIELFSALRTEKAIERCD--VAIILLDATQGL 271 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D V + +K I + K D + + + ++ ++ S++ Sbjct: 272 ENQDLKVINAAAQKKRGMVIAVNKWDLIEKDDKTAIAYEKRLREELRNLSYVPLLFISAL 331 Query: 195 KRKGI 199 ++ I Sbjct: 332 TKQRI 336 >gi|171913936|ref|ZP_02929406.1| GTP-binding protein [Verrucomicrobium spinosum DSM 4136] Length = 502 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 17/192 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P IA G+ N GKSSL+N ++ + S G T+ Sbjct: 215 PQKPLRIAIVGKPNAGKSSLVNAILGEQRT-IVSEIAGTTRDAI------DIPCTVAGKN 267 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G + V+S+ + R+ L L++DC G+ D+ + S + Sbjct: 268 YTLVDTAGLRRKAKIQDAVESFSAMQATKTIRRADL--CLLMVDCAEGISMQDRKIASLI 325 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN-----YPTAHPEVIPTSSVKRKGIE 200 + I+L K D PT + ++T+ L+ N + H +IP S+ +++ ++ Sbjct: 326 VEYQKPCIILLNKFDLYHPTGKMK--DRTEELLENAGREFFFLRHAPMIPVSAKEKQFLD 383 Query: 201 VLRKAILETINY 212 + KAI E +++ Sbjct: 384 KVFKAI-ERVHH 394 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 20/171 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L KN+A + PG T+ + + + ++D Sbjct: 9 VAIVGRPNVGKSALFNRLAG-KNIAIVHDRPGVTRDRLV------ATCRRGVVPFDIMDT 61 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G G + + ++D GV ID ++ L K Sbjct: 62 GGIGATIEDEFAAQVQAEAN----LAMEEADLILFVVDGVEGVTPIDLELSRTLRKSPKP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 +V+ K D K ++ S+ I+ L Sbjct: 118 IILVVNKADSDKRRAHGAEFAKL---------GFNHLVDVSAAHGLRIDEL 159 >gi|121535380|ref|ZP_01667192.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] gi|121306072|gb|EAX47002.1| small GTP-binding protein [Thermosinus carboxydivorans Nor1] Length = 408 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 20/189 (10%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + P+ IA GR N GKSSLIN L N+ N+A S+ PG T + + Sbjct: 1 MQDTPRGARMHIAIFGRRNAGKSSLINALTNQ-NIALVSDVPGTTTDPVY-----KAMEI 54 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + + ++D G + R L + ++ID GV + ++ Sbjct: 55 LPIGPVVIIDTAGIDDEGELGALR------VERTLQVLNKTDQALVVIDQAAGVSEWEER 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + + L K+ + V+ KID A ETL+ K L ++ S+ R+G+E Sbjct: 109 LVAELKKRQIPVIGVVNKIDT-GQPAAAETLDWAKRLA-------IPMVAVSAKTRQGVE 160 Query: 201 VLRKAILET 209 L++ +++ Sbjct: 161 ELKRQMIKH 169 >gi|52786163|ref|YP_091992.1| GTP-binding protein EngA [Bacillus licheniformis ATCC 14580] gi|163119516|ref|YP_079584.2| GTP-binding protein EngA [Bacillus licheniformis ATCC 14580] gi|319645250|ref|ZP_07999483.1| GTP-binding protein engA [Bacillus sp. BT1B_CT2] gi|81825274|sp|Q65I15|DER_BACLD RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|52348665|gb|AAU41299.1| YphC [Bacillus licheniformis ATCC 14580] gi|145903023|gb|AAU23946.2| GTP-binding protein essential for cell growth [Bacillus licheniformis ATCC 14580] gi|317393059|gb|EFV73853.1| GTP-binding protein engA [Bacillus sp. BT1B_CT2] Length = 436 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 73/179 (40%), Gaps = 13/179 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + + GR NVGKSSL+N ++ + + SN G T+ + N Sbjct: 172 EDEVVQFCLIGRPNVGKSSLVNAMIGEERV-IVSNIAGTTRDAI------DTRFTYNQRD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G + + + L R L V +++D G+ + D+ + + Sbjct: 225 FVIVDTAGMRKKGKVYEATEKYSVL--RALKAIDRSEVVCVVLDGEEGIIEQDKRIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVL 202 + + IV+ K D + T+++ + +R++ + V+ S++ +K I L Sbjct: 283 HEAGKAVVIVVNKWDAVEKDER--TMKEFEEKVRDHFQFLDYAPVLFMSALTKKRIHTL 339 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 62/182 (34%), Gaps = 21/182 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS++ N + + ++ + PG T+ + ++ N Sbjct: 2 GKPVVAIVGRPNVGKSTIFNRIAGER-ISIVEDTPGVTRDRI-YSSAEWLNH-----DFN 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 L+D G P I + + + R GV D++V L + Sbjct: 55 LIDTGGIEVGDEPFLAQIRHQAEI-----AMEEADVIIFMTNGREGVTAADEEVAKILYR 109 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D E + Y E P S G+ L A+ Sbjct: 110 TKKPVVLAVNKVD---------NPEMRANIYDFYALGFGEPFPISGTHGLGLGDLLDAVS 160 Query: 208 ET 209 E Sbjct: 161 EH 162 >gi|227510314|ref|ZP_03940363.1| GTP-binding protein EngA [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189966|gb|EEI70033.1| GTP-binding protein EngA [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 435 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 14/189 (7%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 E G +P + GR NVGKSSL+N ++ + S+ G T+ + Sbjct: 166 ETGNVPNDDI-RFSIIGRPNVGKSSLVNAILGENRV-IVSDVAGTTRDAI------DTRF 217 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + + +VD G +N + + + R + + +I+ G+++ D+ Sbjct: 218 EADNIKFTMVDTAGIRKRGKVYENTERYSVM--RAMKAIDQSDVILFVINAEEGIREQDK 275 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRK 197 V + + + V+ K D L T T + + LIRN A+ +I S+ ++ Sbjct: 276 KVAGYAHEAGKAIITVVNKWDMLKKT--NHTQQDFETLIRNEFQYMAYSPIIFVSAKTKQ 333 Query: 198 GIEVLRKAI 206 IE L I Sbjct: 334 RIEQLPALI 342 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 21/181 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +AF GR NVGKS++ N + ++ + PG T+ + + +N A+ Sbjct: 3 MPTVAFIGRPNVGKSTIFNRIAG-DRISIVEDTPGVTRDRIYTHAEWLAN------EFAM 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + AP I + ++ + G+ D+ V L + Sbjct: 56 IDTGGIQISDAPFNTQIKNQAEI-----AIEEADVIVFIVSAKEGLTSDDEQVAKILYRS 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K D + + + Y + +P S V GI L I+E Sbjct: 111 DKPVVLAVNKAD---------NPDAREDIYDFYALGFGDPMPISGVHGTGIGDLLDKIVE 161 Query: 209 T 209 Sbjct: 162 K 162 >gi|330719101|ref|ZP_08313701.1| GTP-binding protein Der [Leuconostoc fallax KCTC 3537] Length = 436 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 78/185 (42%), Gaps = 12/185 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + + GR NVGKSS++N ++ + + S+ G T+ D + + Sbjct: 171 EDDAIRFSIIGRPNVGKSSIVNAILGEERV-IVSDIEGTTRDAI-----DSRFMTADGDE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G +N + + L R L + ++ID G+++ D+ V F Sbjct: 225 FVMVDTAGMRKRGKVYENTEKYSVL--RALKAVDESNVILMVIDAEAGIREQDKHVAGFA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRN--YPTAHPEVIPTSSVKRKGIEVLR 203 + S IV+ K D + T +T+++ + IR + ++ S+ + ++ L Sbjct: 283 HEAGRSMIIVVNKWDAIDKNT--KTMQEFEETIRTEFKFLDYAPIVFVSAKTGQRLDRLP 340 Query: 204 KAILE 208 + I + Sbjct: 341 QLIKD 345 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 21/180 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N + + +A + PG T+ + D+ N + + Sbjct: 4 PIVAIVGRPNVGKSTIFNRMAGER-IAIVEDLPGVTRDR-LYASADWLNYDFKIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 ++ + + V+ + ++ R G+ + D+ V L K Sbjct: 62 EIGNEPFLSEIRGQVEI----------ALEEADVIVMVASGREGLTEADEVVAKLLYKTD 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D E + Y + P S G+ L I++ Sbjct: 112 KPVVLAINKVD---------NPEMRADIYEFYALGLGDPFPISGSHGLGLGDLLDEIVKH 162 >gi|260893107|ref|YP_003239204.1| small GTP-binding protein [Ammonifex degensii KC4] gi|260865248|gb|ACX52354.1| small GTP-binding protein [Ammonifex degensii KC4] Length = 425 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 22/190 (11%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P+ IA GR N GKSSLIN L ++ +A S+ PG T + Sbjct: 2 SLNTTPRGQRLHIALFGRRNAGKSSLINALTGQE-VAIVSDVPGTTTDPVAKAMEILPLG 60 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + A +D G A KK+ + + R+ L L+ID G ++ Sbjct: 61 PVMIIDTAGIDDVGELGALRVKKSFE---------VLNRTDL--ALLVIDPGRGFGPYEE 109 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V ++ V V+ KID L P + L A P+V S++ R+GI Sbjct: 110 EVLKRCEEYKVPVVTVINKID-LYPEVVRNGL--------GVELASPKVF-VSALTRQGI 159 Query: 200 EVLRKAILET 209 E L++ I++ Sbjct: 160 EELKQVIIQH 169 >gi|229160554|ref|ZP_04288549.1| GTP-binding protein engA [Bacillus cereus R309803] gi|228622964|gb|EEK79795.1| GTP-binding protein engA [Bacillus cereus R309803] Length = 438 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 174 DEDTIRFSLIGRPNVGKSSLVNALLGQERV-IVSNVAGTTRDAV------DTPYSKDGKD 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 227 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ RK + L Sbjct: 285 HDSGRAVVIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLEYAPIVFLSAKTRKRTQTLI 342 Query: 204 KAILE 208 I E Sbjct: 343 PVIDE 347 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N +V + ++ + PG T+ + D+ N + N+ + Sbjct: 6 PVIAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGVTRDRI-YSAGDWLNHEFNIIDTGGI 63 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 64 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSN 113 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S G+ L Sbjct: 114 KPVVLAVNKVD---------NPEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDE 160 >gi|160895175|ref|ZP_02075948.1| hypothetical protein CLOL250_02735 [Clostridium sp. L2-50] gi|156863209|gb|EDO56640.1| hypothetical protein CLOL250_02735 [Clostridium sp. L2-50] Length = 301 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 17/181 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TS+ T++ V ++ + +D Sbjct: 10 VAIIGRPNVGKSTLMNQLIGQK-IAITSSKAQTTRNRIQTVYT------SDEGQIVFLDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A+ K + + L+E + V +++ + ++ + L++ Sbjct: 63 PGINRAKN--KLGEYMLKVAEGTLNE---VDVVMWIVEATTFIGAGERYIIEQLERVKTP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 IV+ KID +S + + K +H E++P S++K K + L K + + + Sbjct: 118 IIIVVNKIDAVSEEEVFKAISTYKDA-----CSHAEIVPVSALKGKNKDELIKTLFKYLP 172 Query: 212 Y 212 Y Sbjct: 173 Y 173 >gi|260881015|ref|ZP_05403389.2| ribosome-associated GTPase EngA [Mitsuokella multacida DSM 20544] gi|260850181|gb|EEX70188.1| ribosome-associated GTPase EngA [Mitsuokella multacida DSM 20544] Length = 445 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 10/167 (5%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSS++N ++ + + S+ PG T+ ++ + L+D Sbjct: 181 IAVIGRPNVGKSSIVNAILGEERV-IVSDVPGTTRDAI------DTHFTKDGTKFTLIDT 233 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + V+ + + R L V ++I+ G+ + D+ + + + Sbjct: 234 AGMRRRGKIDEPVERYSVM--RSLRAIDRADVVLMMINAFEGITEQDKKIAGYAHESGKG 291 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRK 197 IV+ K D + TL T L + V+ TS++ + Sbjct: 292 VVIVVNKWDIYPDKDDKSTLRFTDELRDKLGFLQYAPVLYTSALTGQ 338 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 68/181 (37%), Gaps = 26/181 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + +K ++ + PG T+ + + + ++ Sbjct: 6 PIVAIVGRPNVGKSTLFNQI-GKKRVSIVDDMPGVTRDRIYLDAEWLNQH------FTMI 58 Query: 90 DMPGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G + + K + + L+D R G+ D++V L Sbjct: 59 DTGGIEFDESNHILKSMRQQAQLAMDE-------ADVILFLVDGRSGLTTADEEVARLLR 111 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + KID + Q ++ ++ Y + IP S+ + L AI Sbjct: 112 STKKPVILAVNKID-----SPQRAMDVYEF----YNLGLGDPIPISASNAMNLGDLLDAI 162 Query: 207 L 207 + Sbjct: 163 V 163 >gi|159902929|ref|YP_001550273.1| GTP-binding protein EngA [Prochlorococcus marinus str. MIT 9211] gi|226706248|sp|A9BE09|DER_PROM4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|159888105|gb|ABX08319.1| GTP-binding protein (HSR1-related) [Prochlorococcus marinus str. MIT 9211] Length = 456 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 9/169 (5%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKSSL+N + A S+ G T+ + LK A L Sbjct: 177 PIQLAIIGRPNVGKSSLLNSICGETR-AIVSSIRGTTRDTI------DTLLKREQQAWKL 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G R+ + +G I R L L+ID GV + DQ + ++++ Sbjct: 230 IDTAGIRRRRSVSYGPEYFG--INRSLKAIERSDVCLLVIDALDGVTEQDQRLAGRIEQE 287 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRK 197 + +V+ K D + T L + + + Y +++ TS++ + Sbjct: 288 GKACLVVVNKWDAVEKDTYTMPLMEKELRSKLYFLDWADMLFTSALTGQ 336 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 19/180 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS+L+N L + A + PG T+ + + + Sbjct: 2 GRPIVAIIGRPNVGKSTLVNRLCGSRE-AIVDDQPGVTRD------RTYQDAFWADREFK 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 +VD G + + + S +++D + GV D+++ S+L Sbjct: 55 VVDTGGLVFDDESEFLPEIRQQA----KLALSEASVALIVVDGQEGVTTADKEIASWLRH 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K + + + E P S++ G L ++ Sbjct: 111 CECPTLVAVNKC--------ESPEQGLAMAADFWSLGLGEPYPVSAIHGSGTGELLDQVI 162 >gi|20091396|ref|NP_617471.1| GTP-binding protein [Methanosarcina acetivorans C2A] gi|19916534|gb|AAM05951.1| GTP-binding protein [Methanosarcina acetivorans C2A] Length = 209 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 78/206 (37%), Gaps = 28/206 (13%) Query: 22 GLLPKAGPP-EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 +P++G EI F GRSNVGKSSL+ L K R PG T Sbjct: 5 KTVPESGINLEIIFVGRSNVGKSSLLKELFGAK--VRVGKRPGVT----------LRPTH 52 Query: 81 NNLPAMALVDMPGYGYARAPKKNV-DSWGGLIVRYLS-ERSTLRCVYLLIDC-------- 130 + + DMPG+G+ K D V Y+ ++ L++D Sbjct: 53 ARISDFLITDMPGFGFMSGVKDRKQDIVKDKTVHYIEDNAERIKIGVLVVDGPSFPEIVD 112 Query: 131 ---RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTAH 185 ID ++F FL + + + K+DK+ + L+ + + Sbjct: 113 RWDSRDQIPIDVEMFDFLREIGIDTIVAANKMDKVKADEYNDLLDEVAVRLGLEPPWQNW 172 Query: 186 PEVIPTSSVKRKGIEVLRKAILETIN 211 +I S K+ ++ L+ + + ++ Sbjct: 173 KHIIAPISAKKGDLKALKGLLRDRLH 198 >gi|87306807|ref|ZP_01088953.1| probable GTP-binding protein [Blastopirellula marina DSM 3645] gi|87290180|gb|EAQ82068.1| probable GTP-binding protein [Blastopirellula marina DSM 3645] Length = 473 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 22/184 (11%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P+I GR NVGKSSL N L R+ LA N G T+ ++ ++ Sbjct: 2 SLPQIVIVGRPNVGKSSLFNWLAGRR-LAIVDNVAGVTRDRMTYL------MQWRERYFE 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLS-ERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +VD G G +VD I + ++ + + ++D R G+ +DQ+V L Sbjct: 55 IVDTGGIGV-----NDVDDLTDEIEQQIAIAIDSADLILFVVDTREGILPLDQEVARRLR 109 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V K D ++ ++ + Y +++P S+++ + + L I Sbjct: 110 HVNKPIVLVANKTD-------EQHMDH--DADQFYQLGRGKLVPVSTLQNRNKDDLLNVI 160 Query: 207 LETI 210 + + Sbjct: 161 ADRL 164 Score = 83.7 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 11/137 (8%) Query: 26 KAGPPE--IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 + G PE IA GR NVGKS+ +N L + + S G T+ + + Sbjct: 172 QTGEPEMKIAVVGRRNVGKSTFVNTLARAERM-IVSEVAGTTRDSV------DIRFELDG 224 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + +D PG + K +VD + R+ + ++ D + ++D+ + + Sbjct: 225 KSFTAIDTPGLRRRVSVKTDVDFYSTHRAERSIRRADVVLMFF--DASQQISKVDKQLIA 282 Query: 144 FLDKKAVSYQIVLTKID 160 ++ + V+ K D Sbjct: 283 YIAENYKPVVFVVNKWD 299 >gi|30019652|ref|NP_831283.1| GTP-binding protein EngA [Bacillus cereus ATCC 14579] gi|30261599|ref|NP_843976.1| GTP-binding protein EngA [Bacillus anthracis str. Ames] gi|47526799|ref|YP_018148.1| GTP-binding protein EngA [Bacillus anthracis str. 'Ames Ancestor'] gi|47565966|ref|ZP_00237004.1| GTP-binding protein, Era/ThdF family [Bacillus cereus G9241] gi|49184431|ref|YP_027683.1| GTP-binding protein EngA [Bacillus anthracis str. Sterne] gi|49477254|ref|YP_035720.1| GTP-binding protein EngA [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52143844|ref|YP_082984.1| GTP-binding protein EngA [Bacillus cereus E33L] gi|65318869|ref|ZP_00391828.1| COG1160: Predicted GTPases [Bacillus anthracis str. A2012] gi|118477058|ref|YP_894209.1| GTP-binding protein EngA [Bacillus thuringiensis str. Al Hakam] gi|165869461|ref|ZP_02214120.1| GTPase family protein [Bacillus anthracis str. A0488] gi|167633435|ref|ZP_02391760.1| GTPase family protein [Bacillus anthracis str. A0442] gi|167639189|ref|ZP_02397462.1| GTPase family protein [Bacillus anthracis str. A0193] gi|170686176|ref|ZP_02877398.1| GTPase family protein [Bacillus anthracis str. A0465] gi|170706475|ref|ZP_02896935.1| GTPase family protein [Bacillus anthracis str. A0389] gi|177650444|ref|ZP_02933411.1| GTPase family protein [Bacillus anthracis str. A0174] gi|190568605|ref|ZP_03021510.1| ribosome-associated GTPase EngA [Bacillus anthracis Tsiankovskii-I] gi|196033560|ref|ZP_03100972.1| ribosome-associated GTPase EngA [Bacillus cereus W] gi|196038987|ref|ZP_03106294.1| ribosome-associated GTPase EngA [Bacillus cereus NVH0597-99] gi|196046647|ref|ZP_03113871.1| ribosome-associated GTPase EngA [Bacillus cereus 03BB108] gi|206970720|ref|ZP_03231672.1| ribosome-associated GTPase EngA [Bacillus cereus AH1134] gi|206974925|ref|ZP_03235840.1| ribosome-associated GTPase EngA [Bacillus cereus H3081.97] gi|217959081|ref|YP_002337629.1| GTP-binding protein EngA [Bacillus cereus AH187] gi|218231181|ref|YP_002366284.1| GTP-binding protein EngA [Bacillus cereus B4264] gi|218902715|ref|YP_002450549.1| ribosome-associated GTPase EngA [Bacillus cereus AH820] gi|222095233|ref|YP_002529293.1| gtp-binding protein enga [Bacillus cereus Q1] gi|225863467|ref|YP_002748845.1| ribosome-associated GTPase EngA [Bacillus cereus 03BB102] gi|227815649|ref|YP_002815658.1| ribosome-associated GTPase EngA [Bacillus anthracis str. CDC 684] gi|228914177|ref|ZP_04077795.1| GTP-binding protein engA [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228920314|ref|ZP_04083661.1| GTP-binding protein engA [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228926634|ref|ZP_04089703.1| GTP-binding protein engA [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228932889|ref|ZP_04095756.1| GTP-binding protein engA [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228945203|ref|ZP_04107559.1| GTP-binding protein engA [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228951980|ref|ZP_04114077.1| GTP-binding protein engA [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228957879|ref|ZP_04119619.1| GTP-binding protein engA [Bacillus thuringiensis serovar pakistani str. T13001] gi|228984682|ref|ZP_04144855.1| GTP-binding protein engA [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229043348|ref|ZP_04191066.1| GTP-binding protein engA [Bacillus cereus AH676] gi|229069156|ref|ZP_04202447.1| GTP-binding protein engA [Bacillus cereus F65185] gi|229078786|ref|ZP_04211339.1| GTP-binding protein engA [Bacillus cereus Rock4-2] gi|229090565|ref|ZP_04221800.1| GTP-binding protein engA [Bacillus cereus Rock3-42] gi|229109059|ref|ZP_04238659.1| GTP-binding protein engA [Bacillus cereus Rock1-15] gi|229121146|ref|ZP_04250383.1| GTP-binding protein engA [Bacillus cereus 95/8201] gi|229126917|ref|ZP_04255928.1| GTP-binding protein engA [Bacillus cereus BDRD-Cer4] gi|229138297|ref|ZP_04266892.1| GTP-binding protein engA [Bacillus cereus BDRD-ST26] gi|229144202|ref|ZP_04272616.1| GTP-binding protein engA [Bacillus cereus BDRD-ST24] gi|229149801|ref|ZP_04278030.1| GTP-binding protein engA [Bacillus cereus m1550] gi|229155169|ref|ZP_04283281.1| GTP-binding protein engA [Bacillus cereus ATCC 4342] gi|229178011|ref|ZP_04305383.1| GTP-binding protein engA [Bacillus cereus 172560W] gi|229183798|ref|ZP_04311015.1| GTP-binding protein engA [Bacillus cereus BGSC 6E1] gi|229189685|ref|ZP_04316699.1| GTP-binding protein engA [Bacillus cereus ATCC 10876] gi|229195804|ref|ZP_04322564.1| GTP-binding protein engA [Bacillus cereus m1293] gi|229602142|ref|YP_002866007.1| ribosome-associated GTPase EngA [Bacillus anthracis str. A0248] gi|254683091|ref|ZP_05146952.1| GTP-binding protein EngA [Bacillus anthracis str. CNEVA-9066] gi|254723679|ref|ZP_05185465.1| GTP-binding protein EngA [Bacillus anthracis str. A1055] gi|254734440|ref|ZP_05192152.1| GTP-binding protein EngA [Bacillus anthracis str. Western North America USA6153] gi|254740851|ref|ZP_05198539.1| GTP-binding protein EngA [Bacillus anthracis str. Kruger B] gi|254755089|ref|ZP_05207123.1| GTP-binding protein EngA [Bacillus anthracis str. Vollum] gi|254759626|ref|ZP_05211650.1| GTP-binding protein EngA [Bacillus anthracis str. Australia 94] gi|296502173|ref|YP_003663873.1| GTP-binding protein EngA [Bacillus thuringiensis BMB171] gi|300117468|ref|ZP_07055258.1| GTP-binding protein EngA [Bacillus cereus SJ1] gi|301053141|ref|YP_003791352.1| GTP-binding protein EngA [Bacillus anthracis CI] gi|37999522|sp|Q81FR5|DER_BACCR RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|37999526|sp|Q81SW9|DER_BACAN RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|81824337|sp|Q63DM8|DER_BACCZ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|81828346|sp|Q6HL51|DER_BACHK RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|166224305|sp|A0RBV9|DER_BACAH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226741128|sp|B7JGY9|DER_BACC0 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226741130|sp|B7HHQ7|DER_BACC4 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|226741131|sp|B7HL14|DER_BACC7 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783135|sp|C3P591|DER_BACAA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783136|sp|C3L9F4|DER_BACAC RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783137|sp|C1EN01|DER_BACC3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|254783138|sp|B9IVM6|DER_BACCQ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|29895196|gb|AAP08484.1| GTP-binding protein [Bacillus cereus ATCC 14579] gi|30255453|gb|AAP25462.1| ribosome-associated GTPase EngA [Bacillus anthracis str. Ames] gi|47501947|gb|AAT30623.1| GTPase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|47556883|gb|EAL15213.1| GTP-binding protein, Era/ThdF family [Bacillus cereus G9241] gi|49178358|gb|AAT53734.1| GTPase family protein [Bacillus anthracis str. Sterne] gi|49328810|gb|AAT59456.1| GTP-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51977313|gb|AAU18863.1| GTP-binding protein [Bacillus cereus E33L] gi|118416283|gb|ABK84702.1| GTP-binding protein [Bacillus thuringiensis str. Al Hakam] gi|164714901|gb|EDR20419.1| GTPase family protein [Bacillus anthracis str. A0488] gi|167512979|gb|EDR88352.1| GTPase family protein [Bacillus anthracis str. A0193] gi|167531473|gb|EDR94151.1| GTPase family protein [Bacillus anthracis str. A0442] gi|170128573|gb|EDS97440.1| GTPase family protein [Bacillus anthracis str. A0389] gi|170669873|gb|EDT20614.1| GTPase family protein [Bacillus anthracis str. A0465] gi|172083588|gb|EDT68648.1| GTPase family protein [Bacillus anthracis str. A0174] gi|190560205|gb|EDV14185.1| ribosome-associated GTPase EngA [Bacillus anthracis Tsiankovskii-I] gi|195993994|gb|EDX57950.1| ribosome-associated GTPase EngA [Bacillus cereus W] gi|196022580|gb|EDX61263.1| ribosome-associated GTPase EngA [Bacillus cereus 03BB108] gi|196030132|gb|EDX68732.1| ribosome-associated GTPase EngA [Bacillus cereus NVH0597-99] gi|206734356|gb|EDZ51526.1| ribosome-associated GTPase EngA [Bacillus cereus AH1134] gi|206746944|gb|EDZ58336.1| ribosome-associated GTPase EngA [Bacillus cereus H3081.97] gi|217067748|gb|ACJ81998.1| ribosome-associated GTPase EngA [Bacillus cereus AH187] gi|218159138|gb|ACK59130.1| ribosome-associated GTPase EngA [Bacillus cereus B4264] gi|218536841|gb|ACK89239.1| ribosome-associated GTPase EngA [Bacillus cereus AH820] gi|221239291|gb|ACM12001.1| GTP-binding protein [Bacillus cereus Q1] gi|225788315|gb|ACO28532.1| ribosome-associated GTPase EngA [Bacillus cereus 03BB102] gi|227004060|gb|ACP13803.1| ribosome-associated GTPase EngA [Bacillus anthracis str. CDC 684] gi|228587701|gb|EEK45759.1| GTP-binding protein engA [Bacillus cereus m1293] gi|228593734|gb|EEK51539.1| GTP-binding protein engA [Bacillus cereus ATCC 10876] gi|228599647|gb|EEK57250.1| GTP-binding protein engA [Bacillus cereus BGSC 6E1] gi|228605499|gb|EEK62948.1| GTP-binding protein engA [Bacillus cereus 172560W] gi|228628296|gb|EEK85011.1| GTP-binding protein engA [Bacillus cereus ATCC 4342] gi|228633665|gb|EEK90265.1| GTP-binding protein engA [Bacillus cereus m1550] gi|228639210|gb|EEK95626.1| GTP-binding protein engA [Bacillus cereus BDRD-ST24] gi|228645189|gb|EEL01426.1| GTP-binding protein engA [Bacillus cereus BDRD-ST26] gi|228656517|gb|EEL12344.1| GTP-binding protein engA [Bacillus cereus BDRD-Cer4] gi|228662265|gb|EEL17868.1| GTP-binding protein engA [Bacillus cereus 95/8201] gi|228674337|gb|EEL29581.1| GTP-binding protein engA [Bacillus cereus Rock1-15] gi|228692768|gb|EEL46492.1| GTP-binding protein engA [Bacillus cereus Rock3-42] gi|228704468|gb|EEL56901.1| GTP-binding protein engA [Bacillus cereus Rock4-2] gi|228713908|gb|EEL65792.1| GTP-binding protein engA [Bacillus cereus F65185] gi|228725996|gb|EEL77235.1| GTP-binding protein engA [Bacillus cereus AH676] gi|228775076|gb|EEM23469.1| GTP-binding protein engA [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228801795|gb|EEM48672.1| GTP-binding protein engA [Bacillus thuringiensis serovar pakistani str. T13001] gi|228807705|gb|EEM54227.1| GTP-binding protein engA [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228814438|gb|EEM60703.1| GTP-binding protein engA [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228826810|gb|EEM72577.1| GTP-binding protein engA [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228833010|gb|EEM78578.1| GTP-binding protein engA [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228839337|gb|EEM84631.1| GTP-binding protein engA [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228845510|gb|EEM90543.1| GTP-binding protein engA [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266550|gb|ACQ48187.1| ribosome-associated GTPase EngA [Bacillus anthracis str. A0248] gi|296323225|gb|ADH06153.1| GTP-binding protein EngA [Bacillus thuringiensis BMB171] gi|298725303|gb|EFI65955.1| GTP-binding protein EngA [Bacillus cereus SJ1] gi|300375310|gb|ADK04214.1| GTP-binding protein EngA [Bacillus cereus biovar anthracis str. CI] gi|324325620|gb|ADY20880.1| GTP-binding protein Der [Bacillus thuringiensis serovar finitimus YBT-020] Length = 436 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DEDTIRFSLIGRPNVGKSSLVNALLGQERV-IVSNVAGTTRDAV------DTPYSKDGKD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ RK + L Sbjct: 283 HDSGRAVVIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLEYAPIVFLSAKTRKRTQTLI 340 Query: 204 KAILE 208 I E Sbjct: 341 PVIDE 345 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGVTRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S G+ L Sbjct: 112 KPVVLAVNKVD---------NPEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDE 158 >gi|303239305|ref|ZP_07325833.1| ribosome-associated GTPase EngA [Acetivibrio cellulolyticus CD2] gi|302593091|gb|EFL62811.1| ribosome-associated GTPase EngA [Acetivibrio cellulolyticus CD2] Length = 440 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+ N L R+ ++ + PG T+ + + ++ L+ Sbjct: 4 PVVAIVGRPNVGKSTFFNYLAGRR-ISIVEDTPGVTRDRIY------TEVEWRNRKFTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G K + + T + ++D + G+ D +V + L K Sbjct: 57 DTGGIEPYSEDK----IMQQMKSQAEIAIETANVIVFMVDRKDGLTASDNEVATLLRKSK 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D++ A + Y +++ SS+ G+ L I + Sbjct: 113 KPVILVVNKVDRVGELPA--------EVYEFYNLGIGDLMTVSSIHGLGMGDLLDEIYKY 164 Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 72/176 (40%), Gaps = 13/176 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 ++A G+ N GKSSLIN ++ + S+ PG T+ + ++N Sbjct: 177 VIKVAVIGKPNAGKSSLINKVLGEDRV-IVSDIPGTTRDAI------DTYVENEEGKFVF 229 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G +N++ + + ER+ ++ID GV + D + + ++ Sbjct: 230 IDTAGIRRQSKINENIERYSTIRSWTAIERAD--VCLIMIDAEEGVTEQDTKIAGYAHEQ 287 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVL 202 + +V+ K D + T TLE+ + + + V+ S+ + + + Sbjct: 288 GKASIVVVNKWDLVEKNT--GTLEEYRKTVLEKLGFMLYAPVMFISAKSGQRVNKV 341 >gi|153872876|ref|ZP_02001641.1| Small GTP-binding protein domain [Beggiatoa sp. PS] gi|152070659|gb|EDN68360.1| Small GTP-binding protein domain [Beggiatoa sp. PS] Length = 515 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 75/181 (41%), Gaps = 11/181 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 K ++A GR NVGKS+L+N ++ + + T + PG T+ F + + Sbjct: 225 KEQGIKVAIIGRPNVGKSTLVNRMLGYERV-ITFDQPGTTRDSIFI------PFERDGQL 277 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +++ L T V +L+D R G+ D ++ + Sbjct: 278 YTLIDTAGVRRRARVSEKIEKFS--VIKSLQAIETGNVVIMLLDGREGITDQDANLLGIV 335 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + I + K D L + ++ ++ A +V S++ + L ++ Sbjct: 336 IDSGCALIIAVNKWDGLEKSHREQVRYHLSRKLQFLDFA--KVHFISALHGSNVGHLFES 393 Query: 206 I 206 I Sbjct: 394 I 394 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 64/176 (36%), Gaps = 21/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 I GR NVGKS+L N L ++ A ++ PG T+ ++D Sbjct: 5 IVIVGRPNVGKSTLFNALTKTRD-ALVADQPGLTRDRRIGRGC------VGDSDYWIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ + + V L+D R G+ DQ++ +L + Sbjct: 58 GGL-----STEDDAILERISHQARLAIKEADGVLFLVDGRGGLTGGDQEITQYLRRFNTP 112 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K E L+K Y + S+V R+GI L A+L Sbjct: 113 IFLVINKA---------EGLQKDLVSAEFYQLGFENIHAISAVHRQGINDLMDAVL 159 >gi|332982748|ref|YP_004464189.1| iron-only hydrogenase maturation protein HydF [Mahella australiensis 50-1 BON] gi|332700426|gb|AEE97367.1| iron-only hydrogenase maturation protein HydF [Mahella australiensis 50-1 BON] Length = 413 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 20/193 (10%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 ++ P + IA GR N GKSS+IN + N+K A S+ G T P + Sbjct: 3 DMNTTPTSSRMHIAIFGRRNAGKSSIINAITNQKA-ALVSDVAGTTTD-----PVSKAME 56 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 + + ++D G + + R+ L L+ID G+ ++ Sbjct: 57 LLPIGPVVIIDTAGLDDIGPLGEMRIQRTYDV----LNRTDL--AVLVIDGEVGLTDFEE 110 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 ++ + +K + + K DK QE L++ + ++ E++ S+ +GI Sbjct: 111 NILRRIREKNIPVVGAVNKADK--AVYTQEQLKEWEKKLKL------ELVEVSAATGQGI 162 Query: 200 EVLRKAILETINY 212 + L+ AI+ Y Sbjct: 163 DELKMAIVRHAPY 175 >gi|313893315|ref|ZP_07826890.1| ribosome biogenesis GTPase Era [Veillonella sp. oral taxon 158 str. F0412] gi|313442211|gb|EFR60628.1| ribosome biogenesis GTPase Era [Veillonella sp. oral taxon 158 str. F0412] Length = 299 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ K +A S+ T++ V D + +D Sbjct: 12 VAVVGRPNVGKSTLINALIGDK-IAIVSDKAQTTRNRIICVYTD------EAKQIVFMDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ + V ++ D + L + V Sbjct: 65 PGV---HKPKHKLGEF--MVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQLQRVKVP 119 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID L E + + YP A VIP S+ ++ + + K + ET+ Sbjct: 120 VFLVVNKIDTLKKEELLEAIVSYQNA---YPFAG--VIPISAKDKENLPEILKVLEETL 173 >gi|116253295|ref|YP_769133.1| GTP-binding protein EngA [Rhizobium leguminosarum bv. viciae 3841] gi|166225846|sp|Q1MDD6|DER_RHIL3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|115257943|emb|CAK09041.1| putative engA GTP-binding protein [Rhizobium leguminosarum bv. viciae 3841] Length = 473 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ + + ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGDARLMGLTFTIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A A G + + + ++D + G+ +D D+ L ++ Sbjct: 58 AGLEEADAES----LQGRMRAQTEAAIDEADLSLFVVDAKSGLTPVDTDLAEMLRRRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E Y E P S+ +G+ LR AI+ I Sbjct: 114 VVLVANKS---------EARGSDSGFYDAYTLGLGEPTPISAEHGQGMLDLRDAIVAAIG 164 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 13/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A GR N GKS+LIN + L T G T+ V D+ Sbjct: 199 DTKPLRVAIVGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSIS-VEWDWRG-----RT 251 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + + D G + ++ + L V ++ D ++ D + + Sbjct: 252 IKMFDTAGMRRKARVIEKLEKLS--VADALRAIRFAETVVIVFDATIPFEKQDLQIVDLV 309 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 ++ + + K D + Q L + +P S G++ L Sbjct: 310 LREGRAAVLAFNKWDMI--EDRQAVLADLREKTDRLLPQARGIRAVPISGQTGWGLDKLM 367 Query: 204 KAILET 209 +AI++T Sbjct: 368 QAIIDT 373 >gi|315108429|gb|EFT80405.1| GTP-binding protein Era [Propionibacterium acnes HL030PA2] Length = 342 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 72/187 (38%), Gaps = 26/187 (13%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F GR N GKS+L N LV K +A S+ P T+H+ V D + ++D Sbjct: 45 VCFVGRPNAGKSTLTNALVGSK-IAIASSKPQTTRHVIRGVVTD------EKSQIVVIDT 97 Query: 92 PGYGYARAPKKNV------DSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 PG R D+W + + V L + R G D + S + Sbjct: 98 PGLHKPRTLLGQRLNDLVFDTWTQV---------DVIGVCLPSNQRIGPG--DTYLVSEI 146 Query: 146 DKK-AVSYQIVL-TKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + I L TK D +S E L L R EV+P S+V + I+ +R Sbjct: 147 AELPRRPTLIALATKSDLVSKARMAEHLAAIDKLQREVGIEFVEVVPCSAVSGEQIDEVR 206 Query: 204 KAILETI 210 I + Sbjct: 207 DVIASLL 213 >gi|309389060|gb|ADO76940.1| ribosome-associated GTPase EngA [Halanaerobium praevalens DSM 2228] Length = 438 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 13/178 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA G+ NVGKSSL+N L+ +K + S+ PG T+ + +K + +D Sbjct: 180 IAVIGKPNVGKSSLVNHLIGKKRV-IVSDMPGTTRDAV------DTMIKWKDISFNFIDT 232 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G K++V+ + L R L V ++ID + GV D+ + + + + Sbjct: 233 AGLRRKSRVKEDVEYYSNL--RALRSVDRADAVLMMIDAQEGVTDQDKKIAGYAHDEGKA 290 Query: 152 YQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 I + K D + T ++ Y ++ + V S++ + I+ L + Sbjct: 291 MVIAINKWDLMEKDSGTMDRYTDEVYYQLK--FLNYVPVTYISALTGERIDELLSLLE 346 Score = 91.4 bits (226), Expect = 7e-17, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 21/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV + A P T+ + + ++D Sbjct: 6 VAIVGRPNVGKSTLFNRLVGGRR-AIVEGEPNVTRDRIY------GETEWLGKKFNVIDT 58 Query: 92 PGYGYARAPK-KNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K KN + I + ++D R G+ +D+D+ L + Sbjct: 59 GGIVLHDNDKIKNQIKYQAEI-----AMEEADLILFVVDSRTGMTGVDEDIAQLLYRTNK 113 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ K+ ++ + + Y S+ K L + Sbjct: 114 EVILVVNKV--------EDFSNQEEIGWEFYSLGFGTPFLISAEHGKNTGQLLDQV 161 >gi|145351972|ref|XP_001420333.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580567|gb|ABO98626.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 555 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 67/175 (38%), Gaps = 6/175 (3%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL+N L + S+ G T+ + +D K L+D Sbjct: 285 VAIIGRPNVGKSSLLNGLAGEAR-SIVSDFSGTTRDSIDTLVED----KYTGRKFTLIDT 339 Query: 92 PGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K D L + R L V L+ID G Q D + ++ Sbjct: 340 AGIRRRTQVKSGTDGAEKLSVGRALQAMKRADVVVLVIDGTEGPSQQDFVLAERATQEGC 399 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + + K D + T ++ + E++ TS++ + I+ + A Sbjct: 400 AIVLCINKWDLVDKDTHTMNKYTDDMRLKLRVFEYAEIVYTSALTGQRIQKILDA 454 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 27/203 (13%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + +P P +A GR NVGKS+L N L K A + PG T+ +V + Sbjct: 77 DWSKVPDEALPRVAVVGRPNVGKSALFNRLTGTKR-AIVYDEPGVTRDR-MYVRAYWGEH 134 Query: 80 KNNLPAMALVDMPGYG-----YARAPKKN----VDSWGGLIVRYLSER-STLRCVYLLID 129 + +VD G PK + V+ G+I +E + ++D Sbjct: 135 E-----FMMVDTGGLENLPANPEGGPKTDTVGGVEILPGMIEAQAAEAVREASVLIFVVD 189 Query: 130 CRHGVKQIDQDVFSFLD--KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE 187 + G+ D D+F++L + + + K + + Q ++ + Sbjct: 190 GQVGLTAADMDIFAWLRRTHSKIPLHLAVNKCESTTKGEDQ--------ILEFWSLGDVT 241 Query: 188 VIPTSSVKRKGIEVLRKAILETI 210 + S++ G L + T+ Sbjct: 242 PLAVSAISGTGTGELLDNMCATL 264 >gi|104774144|ref|YP_619124.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514234|ref|YP_813140.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275034|sp|Q04A20|ERA_LACDB RecName: Full=GTPase Era gi|122983938|sp|Q1G9W6|ERA_LACDA RecName: Full=GTPase Era gi|103423225|emb|CAI98053.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093549|gb|ABJ58702.1| GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125924|gb|ADY85254.1| GTP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 301 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TS P T++ + + + + VD Sbjct: 12 VALVGRPNVGKSTLMNRLIGQK-VAITSAKPQTTRNKISGIYTE------DDMQVVFVDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG ++D + LS + V ++D + + ++ V L + Sbjct: 65 PGI---FKSHSDLDEYMD--KASLSSLKDVDLVMFMVDAK-EAGKGEEYVAGLLKDLDIP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID++ P ++ + + + E +P S+ + G++ L K + + + Sbjct: 119 VFLVINKIDQVHPNELLPIIDSYQAVGK-----FAEFLPISARQGNGVDDLLKTLKDYL 172 >gi|299783191|gb|ADJ41189.1| GTP-binding protein engA [Lactobacillus fermentum CECT 5716] Length = 370 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 80/189 (42%), Gaps = 11/189 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +F GR NVGKSSL+N ++ + S+ G T+ + + Sbjct: 171 EDDRIRFSFIGRPNVGKSSLVNAILGENRV-IVSDMAGTTRDAI-----NTQFTAKDGRE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G +N + + ++R + V ++++ G++++D+ + + Sbjct: 225 FTMVDTAGIKKKGKLYENTERYA--LMRSMRAIDDSDVVLVVLNAEEGIRELDKHIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + + IV+ K D + Q T+ LIR+ ++ ++ S+ ++ + L Sbjct: 283 HEAGRAVIIVVNKWDTIPDRD-QRTMTDFTNLIRHEFQYLSYAPIVFVSAKTKQRLSRLP 341 Query: 204 KAILETINY 212 + I E ++ Sbjct: 342 EMIEEAYDH 350 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + + +A + PG T+ + ++ +++ Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGER-IAIVEDTPGVTRDR-LYAHGEWLGKN-----FSMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + P I + ++++ +GV D+ V L + Sbjct: 57 DTGGIEMSDQPLLTQIRQQAEI-----AIEEADVIIMVVNVENGVTDADEQVAQILYRSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D + L+ + Y E P SSV G+ + A++E Sbjct: 112 KPVVLAVNKVD-----NPERRLDVYDF----YQLGLGEPYPVSSVHGVGLGDMLDAVIE 161 >gi|212638693|ref|YP_002315213.1| GTPase [Anoxybacillus flavithermus WK1] gi|212560173|gb|ACJ33228.1| GTPase [Anoxybacillus flavithermus WK1] Length = 306 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+ +N ++ +K +A S+ P T++ V + + +D Sbjct: 15 VAIIGRPNVGKSTFLNRVIGQK-IAIMSDKPQTTRNKIQGVYT------TDDAQIIFIDT 67 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + + + S + + +++ G + D+ + L + Sbjct: 68 PGI---HKPKHKLGDFMVKVAQ--SALQEVDLILFMVNAVEGFGRGDEFIIERLKQVQTP 122 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID++ P +E+ + L + EVIP S+++ +E L + I + Sbjct: 123 VFLVINKIDEVHPDDLLPLIEQYRSL-----HSFAEVIPISALQGNNVETLLQQIKNYL 176 >gi|256372122|ref|YP_003109946.1| small GTP-binding protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008706|gb|ACU54273.1| small GTP-binding protein [Acidimicrobium ferrooxidans DSM 10331] Length = 429 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 65/172 (37%), Gaps = 11/172 (6%) Query: 36 GRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYG 95 GR NVGKSSL N LV A + PG T V + ++ + + VD G Sbjct: 183 GRPNVGKSSLFNRLVGEPR-AIVYDQPGTT------VDTLDTVVETDEGRIRFVDTAGLR 235 Query: 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIV 155 + + + +VR L+ L+ID GV DQ + +D +V Sbjct: 236 RRSRYESGTEYFS--MVRTLAAIDAADVSLLVIDATEGVTGWDQRLVERIDAAGSPVVVV 293 Query: 156 LTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 L K D+L + + P + S++ +G+ + AI Sbjct: 294 LNKWDQLDAEAKDRIERDVEDRLAFVTGLDP--VRISALTGRGVHRVLPAIF 343 Score = 98.7 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 68/180 (37%), Gaps = 21/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKSSL N +V R+ A P T+ + + +A+VD Sbjct: 4 VVIVGRPNVGKSSLFNRVVGRRE-AVVEERPKVTRDAK------EATIDWEGAPLAIVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 GY A +D+ V R+ L V +D R + D + + + V Sbjct: 57 GGY---LAGADGLDAAVSAAVEAALRRADLALVV--VDARVPPTEEDAAIARVVRRAKVP 111 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K+D SP + + E +P S++ +G+ L + ++ Sbjct: 112 SILVANKVD--SPGHEPA-------IWEHLALGVGEPVPVSAMHGRGVFELLDLVARRLD 162 >gi|23099252|ref|NP_692718.1| GTP-binding protein EngA [Oceanobacillus iheyensis HTE831] gi|37999696|sp|Q8EQA8|DER_OCEIH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|22777481|dbj|BAC13753.1| GTP binding protein [Oceanobacillus iheyensis HTE831] Length = 436 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 20/195 (10%) Query: 21 IGLLPKAGPPE-------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 +G P E + GR NVGKSSL+N L+N + S G T+ Sbjct: 160 VGHFPNESEEEKDEDTIYFSLIGRPNVGKSSLVNALLNEDRV-IVSEIEGTTRDAI---- 214 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 + L + ++D G ++ + + L R L V +LID G Sbjct: 215 --DTKLHRDDQDFVIIDTAGMRKRGKVYESTEKYSVL--RALRAIERSDVVLVLIDAETG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPT 191 +++ D+ + + + IV+ K D + + +++ + IR + + V+ Sbjct: 271 IREQDKRIAGYAHDAGRAIVIVVNKWDTVDSNE--KAMKEFEKNIRAHFQYLDYAPVVFL 328 Query: 192 SSVKRKGIEVLRKAI 206 S+ +K + L AI Sbjct: 329 SAKTKKRMHTLVPAI 343 Score = 95.2 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 61/176 (34%), Gaps = 21/176 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS++ N LV + ++ + PG T+ + +N + ++D Sbjct: 6 VAIVGRPNVGKSTIFNRLVGER-ISIVEDIPGVTRDRIY------ANAEWLNHTFNIIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G P I + L++ + G+ D +V L K Sbjct: 59 GGIELGDEPLLVQMRQQAEI-----AIDEADVIVFLLNGKEGITSADDEVAKLLFKSNKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D + + + Y + P S G+ L ++ Sbjct: 114 VVVGVNKMD---------NPQMHETIYEYYSLGFGQPFPISGTHGLGLGDLLDEVV 160 >gi|299771613|ref|YP_003733639.1| GTP-binding protein EngA [Acinetobacter sp. DR1] gi|298701701|gb|ADI92266.1| GTP-binding protein EngA [Acinetobacter sp. DR1] Length = 469 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 11/174 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 KA +A GR NVGKS+L+N L+ + + PG T+ + + + Sbjct: 173 KATGLRLAIIGRPNVGKSTLVNRLLGEDRVV-AFDQPGTTRDSIYI------PFERDGRQ 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G ++ ++ + IV+ L V +++D R GV + D + + Sbjct: 226 YTLIDTAGVRRKGKVEEMIEKFS--IVKTLQAIKDAHVVVVVLDAREGVVEQDLHLIGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 + + I + K D ++ ++ P A +V S++ G+ Sbjct: 284 LEAGRAMMIAINKWDNMTEYDRKQCKLDVDRRFDFIPWA--KVHLISALHGTGV 335 Score = 88.7 bits (219), Expect = 5e-16, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 21/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N + + A ++ G T+ + + + +V Sbjct: 3 PVIALIGRPNVGKSTLFNQIT-KSRDALVADFAGLTRDRKY------GDATYQNKSFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G G N + + + + + ++D R G+ D+ + L Sbjct: 56 DTGGIGENEGGIDN-----YMAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLG 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K+D + A L+ Y E + ++ +G++ + + +LE Sbjct: 111 KKIYLVANKVDGVHAEAA---------LVEFYKLGMGEPLQVAASHGRGVQQMLEDVLEN 161 Query: 210 I 210 + Sbjct: 162 V 162 >gi|297735123|emb|CBI17485.3| unnamed protein product [Vitis vinifera] Length = 320 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 20/182 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+L N ++ +K L+ ++ P T+H + M L D Sbjct: 25 VAVLGKPNVGKSTLANQMIGQK-LSIVTDKPQTTRHRILGI------CSGPEYQMILYDT 77 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFLDKK-- 148 PG +K + ++++ + + CV +L+D ++ID+ + + Sbjct: 78 PG-----VIEKKMHKLDSMMMKNVRSATINADCVVVLVDACKEPQKIDEVLEEGVGNLKD 132 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + +VL K D + P + LE + I EVIP S+ +G++ ++ IL Sbjct: 133 KLPTLLVLNKKDLIKPGEIAKKLEWYEKFI-----DVDEVIPVSAKYGQGVDDVKDWILS 187 Query: 209 TI 210 + Sbjct: 188 KL 189 >gi|184155357|ref|YP_001843697.1| GTP-binding protein EngA [Lactobacillus fermentum IFO 3956] gi|238692974|sp|B2GC35|DER_LACF3 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|183226701|dbj|BAG27217.1| GTP-binding protein [Lactobacillus fermentum IFO 3956] Length = 437 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 80/189 (42%), Gaps = 11/189 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +F GR NVGKSSL+N ++ + S+ G T+ + + Sbjct: 171 EDDRIRFSFIGRPNVGKSSLVNAILGENRV-IVSDMAGTTRDAI-----NTQFTAKDGRE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G +N + + ++R + V ++++ G++++D+ + + Sbjct: 225 FTMVDTAGIKKKGKLYENTERYA--LMRSMRAIDDSDVVLVVLNAEEGIRELDKHIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + + IV+ K D + Q T+ LIR+ ++ ++ S+ ++ + L Sbjct: 283 HEAGRAVIIVVNKWDTIPDRD-QRTMTDFTNLIRHEFQYLSYAPIVFVSAKTKQRLSRLP 341 Query: 204 KAILETINY 212 + I E ++ Sbjct: 342 EMIEEAYDH 350 Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + + +A + PG T+ + ++ +++ Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGER-IAIVEDTPGVTRDR-LYAHGEWLGKN-----FSMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + P I + ++++ +GV D+ V L + Sbjct: 57 DTGGIEMSDQPLLTQIRQQAEI-----AIEEADVIIMVVNVENGVTDADEQVAQILYRSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D + L+ + Y E P SSV G+ + A++E Sbjct: 112 KPVVLAVNKVD-----NPERRLDVYDF----YRLGLGEPYPVSSVHGVGLGDMLDAVIE 161 >gi|86608739|ref|YP_477501.1| GTP-binding protein EngA [Synechococcus sp. JA-2-3B'a(2-13)] gi|123502588|sp|Q2JM09|DER_SYNJB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|86557281|gb|ABD02238.1| GTP-binding protein EngA [Synechococcus sp. JA-2-3B'a(2-13)] Length = 459 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 14/187 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P ++ GR NVGKSSL+N LV + A S G T+ V Sbjct: 175 EPDPIAVSIVGRPNVGKSSLLNRLVGSER-AIVSPISGTTRDAIDTVVT------WEGQP 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + I R V L+ID GV + DQ + + Sbjct: 228 YRLIDTAGIRKKNRVQYGIEFFS--INRAFKAIQRSDAVLLVIDALEGVTEQDQRLAGRI 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYL-IRNYPTAHPEVIPTSSVKRKGIEVLRK 204 +++ + +V+ K D + E T+ + R Y ++ S++ + Sbjct: 286 EEEGRACVVVVNKWDAVENKDTHTINEFTREIRDRLYFIEWAPLLFVSALTGQRTHK--- 342 Query: 205 AILETIN 211 I E +N Sbjct: 343 -IFEQVN 348 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 74/182 (40%), Gaps = 19/182 (10%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L+N + ++ A + PG T+ + ++ N + + Sbjct: 3 LPLVAIVGRPNVGKSTLVNRMAGVRS-AIVHDEPGVTRDRLY------QEVEWNGRRLRV 55 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G + + + + + ++ + + V ++D R G+ D +V +L K+ Sbjct: 56 VDTGGLVFG----DDSEFLPHIRQQAMAAMAEAQAVIFVVDGREGLTPADVEVADWLRKQ 111 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + + K + + + IP S + G+ L +A+L Sbjct: 112 PLPVVVAVNKC--------ESGQMGLAQAAAFWELGLGDPIPCSGIHGNGVAELLEAVLA 163 Query: 209 TI 210 + Sbjct: 164 HL 165 >gi|300704410|ref|YP_003746013.1| GTPase [Ralstonia solanacearum CFBP2957] gi|299072074|emb|CBJ43406.1| GTPase involved in ribosome synthesis and maintenance [Ralstonia solanacearum CFBP2957] Length = 447 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + + + N L+D Sbjct: 183 IAIVGRPNVGKSTLVNALIGEERV-IAFDMPGTTRDAIY------VDFERNGKPYTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D + + D + F+ + + Sbjct: 236 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I + K D L + ++ A V S+ +R GI L K++ + Sbjct: 294 LVIGVNKWDGLDGHARDRIKHDLERKLQ--FLAFANVHYISAKQRTGIGALMKSVDDA 349 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 63/185 (34%), Gaps = 29/185 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADMPGLTRD------RHYGEGRVGERPFIAI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS---TLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + R V ++D R G+ D+ + +L Sbjct: 56 DTGGFEPVAKEGIVAEMAK-------QTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + + K E ++ T Y + SS G+ R + Sbjct: 109 KTGRRILLAVNKA---------EGMKYTAVATDFYELGLGDPRAISSAHGDGV---RDLV 156 Query: 207 LETIN 211 E ++ Sbjct: 157 DEALD 161 >gi|298346752|ref|YP_003719439.1| GTP-binding protein EngA [Mobiluncus curtisii ATCC 43063] gi|298236813|gb|ADI67945.1| GTP-binding protein EngA [Mobiluncus curtisii ATCC 43063] Length = 523 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 67/186 (36%), Gaps = 25/186 (13%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P +A GR NVGKS+L+N ++ R+ A + PG T+ + + N Sbjct: 84 PNWPTLAVVGRPNVGKSTLVNRILGRRE-AVVLDEPGVTRDRVTY------DAHWNGRNF 136 Query: 87 ALVDMPG--YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 LVD G G + + D I ++D G D+ + Sbjct: 137 HLVDTGGWDVGVSGLDRAVADQAEIAIDL-------ADAALFVVDANVGATATDERLMKL 189 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + +V K+D + QE + + P S++ +G L Sbjct: 190 LRRAGKPVLLVANKVD----SERQEA-----DAAALWNLGMGQPYPISALHGRGTGDLLD 240 Query: 205 AILETI 210 AIL+ + Sbjct: 241 AILQVL 246 Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 11/171 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR NVGKSSL+N L A S PG T+ L+ + Sbjct: 258 EDSTPRVALVGRPNVGKSSLLNSLSG-AGRAVVSEVPGTTRDPV------DEVLELDGQQ 310 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 VD G D + L + + +L+D + + D V + + Sbjct: 311 WVFVDTAGVRRRVKRSVGADYYSVLRTQ--AAIENADVALVLLDGGEPLTEQDVRVVNQV 368 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 + + +V K D + Q L+ + + + P+ I S+ Sbjct: 369 IEAGRALVLVNNKWDLV-DEYRQGELKYEQESDLAHVSWAPK-INISAKTG 417 >gi|83747951|ref|ZP_00944982.1| GTP-binding protein [Ralstonia solanacearum UW551] gi|207723168|ref|YP_002253567.1| gtp-binding protein [Ralstonia solanacearum MolK2] gi|83725369|gb|EAP72516.1| GTP-binding protein [Ralstonia solanacearum UW551] gi|206588362|emb|CAQ35325.1| gtp-binding protein [Ralstonia solanacearum MolK2] Length = 447 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + + + N L+D Sbjct: 183 IAIVGRPNVGKSTLVNALIGEERV-IAFDMPGTTRDAIY------VDFERNGKPYTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D + + D + F+ + + Sbjct: 236 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I + K D L + ++ A V S+ +R GI L K++ + Sbjct: 294 LVIGVNKWDGLDGHARDRIKHDLERKLQ--FLAFANVHYISAKQRTGIGALMKSVDDA 349 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 63/185 (34%), Gaps = 29/185 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADMPGLTRD------RHYGEGRVGERPFIAI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS---TLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + R V ++D R G+ D+ + +L Sbjct: 56 DTGGFEPVAKEGIVAEMAK-------QTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + + K E ++ T Y + SS G+ R + Sbjct: 109 KTGRRILLAVNKA---------EGMKYTAVATDFYELGLGDPRAISSAHGDGV---RDLV 156 Query: 207 LETIN 211 E ++ Sbjct: 157 DEALD 161 >gi|153823698|ref|ZP_01976365.1| GTP-binding protein Era [Vibrio cholerae B33] gi|126518786|gb|EAZ76009.1| GTP-binding protein Era [Vibrio cholerae B33] Length = 282 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H V D VD Sbjct: 34 VAIVGRPNVGKSTLLNNLLGQK-ISITSRKPQTTRHRIMGVETD------GNYQAIYVDT 86 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V +++ H D+ VF+ L K Sbjct: 87 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVLFVVEGTH-WTADDEMVFTKLQKANF 140 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D++ E + L + +++P S+ + K +VL+K + + + Sbjct: 141 PVVLCVNKVDQVK--DRNEVMLHMLELSKR--MQFVDIVPISAKQGKNTDVLKKHVRDHL 196 >gi|224826453|ref|ZP_03699555.1| small GTP-binding protein [Lutiella nitroferrum 2002] gi|224601554|gb|EEG07735.1| small GTP-binding protein [Lutiella nitroferrum 2002] Length = 463 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 20/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ A ++ PG T+ + + + + +V Sbjct: 3 PTVALVGRPNVGKSTLFNRLTRSRD-ALVADQPGLTRD------RHYGHGRVGDKPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + + + L + L+D R G+ D+ + + L + Sbjct: 56 DTGGFEP--VVDEGILF--EMARQTLQAVDEADAIVFLVDGRTGITPQDKIIANRLRQND 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K + +S + A + A E + S+ G+ L + +LE Sbjct: 112 RPVFLVVNKAEGISQSIA---------GAEFHELALGEPLAISAAHGDGVRELMEMVLE 161 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 75/180 (41%), Gaps = 11/180 (6%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P+ A GR NVGKS+L+N ++ + + + G T+ + + + + ++ Sbjct: 175 PKFAVIGRPNVGKSTLVNAILGEERV-IAFDQAGTTRDSIYI------DFERDDHTYTII 227 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + ++ + +++ + L++D + + + D + F + Sbjct: 228 DTAGVRRRGKVNETIEKFS--VIKTMKAIEDANVAVLVLDAQLDISEQDATIAGFALEAG 285 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K D + T Q+ L K + + + S+++ +GI L K+I E Sbjct: 286 RALVVAVNKWDNID--TEQKELVKHEIARKLGFLDFAKFHFISAIEGRGIADLFKSIDEA 343 >gi|90021085|ref|YP_526912.1| GTP-binding protein EngA [Saccharophagus degradans 2-40] gi|123396308|sp|Q21KS9|DER_SACD2 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|89950685|gb|ABD80700.1| Small GTP-binding protein domain [Saccharophagus degradans 2-40] Length = 471 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 KA ++A GR NVGKS+L+N ++ + + PG T+ + + + A Sbjct: 173 KAKGIKLAIVGRPNVGKSTLVNRMLGEDRVV-VYDMPGTTRDSIYIEY------ERDGKA 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G + K +V+ + IV+ L V L++D + G+ D + + Sbjct: 226 YTIIDTAGVRRRKNIKLSVEKFS--IVKTLQAIDDANVVILVMDAQEGIVDQDLHLMGHV 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + L K D L ++ KT+ R ++ S++ G+ L Sbjct: 284 IDSGRALVVALNKWDNLDND--HKSYVKTELSRRLQFVDFADLHFISALHGTGVGDL 338 Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 21/182 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR NVGKS+L N L ++ A +N G T+ + + + Sbjct: 2 IPTLALVGRPNVGKSTLFNRLTRSRD-AIVANFSGLTRDRQY------GEATHGDKRFIV 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 VD G ++ +DS+ + + L V ++D R G+ D + L Sbjct: 55 VDTGGI---SGEEEGIDSY--MAGQSLQAIEEADMVAFIVDARVGLTAADMQIAQHLRTC 109 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 ++ K+D ++ + + +VI ++ + I + +LE Sbjct: 110 NKPIFLLANKVDGVNESIVCAPF---------FELGLGDVIGIAAAHGRNINTMLDTVLE 160 Query: 209 TI 210 + Sbjct: 161 NV 162 >gi|303257000|ref|ZP_07343014.1| GTP-binding protein Era [Burkholderiales bacterium 1_1_47] gi|302860491|gb|EFL83568.1| GTP-binding protein Era [Burkholderiales bacterium 1_1_47] Length = 303 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN LV K ++ TS P T+ V L + VD Sbjct: 18 VAVIGRPNVGKSTLINALVGEK-VSITSKKPQTTRDRIMGV------LTTDNAQYLFVDT 70 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG+ + + + + L S + V ++I+ G + DQ V + L K A + Sbjct: 71 PGF-QTKHSSELLARMNQSVRSSL---SDVDAVVMVIEAT-GWRPEDQVVLNLLSKDAKN 125 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K D++ + A L K + +P +V+P S+ K + ++VL I + + Sbjct: 126 VILAINKTDEVKESEAM--LPLIKESMEKFP--FADVVPVSAEKTRQLDVLLDVIRKYL 180 >gi|292670962|ref|ZP_06604388.1| GTP-binding protein EngA [Selenomonas noxia ATCC 43541] gi|292647583|gb|EFF65555.1| GTP-binding protein EngA [Selenomonas noxia ATCC 43541] Length = 428 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 75/187 (40%), Gaps = 13/187 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ IA GR NVGKSSL+N L+ + S+ PG T+ ++ + Sbjct: 160 ESDEIAIAVVGRPNVGKSSLVNRLLGEDRV-IVSDVPGTTRDAI------DTHFTRDGVK 212 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G V+ + + R L V ++I+ G+ + D + ++ Sbjct: 213 YLLIDTAGMRRKGKITLPVERYSVM--RSLRAIDRAGVVLMVINAAEGILEQDTKIAGYV 270 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY-PTAHPEVIPTSSVKRKGIE---V 201 + IV+ K D + TL T L + + ++ TS++ + IE Sbjct: 271 HESGKGVIIVVNKWDIFPDKNDKSTLRFTDELRDKFGFLQYAPILYTSALTGQRIERVTE 330 Query: 202 LRKAILE 208 L K + E Sbjct: 331 LVKYVAE 337 Score = 82.9 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 62/167 (37%), Gaps = 20/167 (11%) Query: 41 GKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAP 100 GKS+L N + +K ++ + PG T+ ++ ++ N + ++D G + Sbjct: 2 GKSTLFNQI-GKKRISIVDDMPGVTRDRI-YMDAEWLNHE-----FIMIDTGGIEF---- 50 Query: 101 KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKID 160 ++ + + + L+D R G+ D++V L + + + KID Sbjct: 51 DESDHILRSMRSQAELAIEEADVILFLVDGRAGLTSSDEEVARILRRTQKPVILAVNKID 110 Query: 161 KLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + ++ + Y + IP S+ + L + Sbjct: 111 ---------SFDREALIYDFYALGLGDPIPISASNAMNLGDLLDMVA 148 >gi|295091914|emb|CBK78021.1| ribosome-associated GTPase EngA [Clostridium cf. saccharolyticum K10] Length = 444 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 13/180 (7%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA G+ NVGKSS++N L+ + SN G T+ + + +N Sbjct: 179 RPRIAIVGKPNVGKSSIVNKLLGENRV-IVSNIAGTTRDAV------DTEIVHNGTEYVF 231 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G K+ ++ + I+R ++ V ++ID GV + D + + Sbjct: 232 IDTAGLRRKNKIKEELERYS--IIRTVTAVERADVVLVVIDATEGVTEQDAKIAGIAHDR 289 Query: 149 AVSYQIVLTKIDKLSPTTAQ--ETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 IV+ K D + E K K ++ P + E + S+ + + L I Sbjct: 290 GKGIIIVVNKWDAIEKNDKTIYEYTNKIKTILSFVP--YAEYVFVSAQTGQRLNKLYDLI 347 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 66/178 (37%), Gaps = 19/178 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N+L ++ + PG T+ + ++ A L+ Sbjct: 6 PVVAVVGRPNVGKSTLFNVLAGE-MISIVKDTPGVTRDRIY------ADCTWLDKAFTLI 58 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P + + +T + ++D R G+ D V L K Sbjct: 59 DTGGI----EPDSRDIILAQMREQAEIAIATADVIIFIVDVRQGLTDSDSKVADMLRKSR 114 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + + K+D + + Y + IP S+ R G+ L A++ Sbjct: 115 KPVILAVNKVD--------SFAKFGNDVYEFYNLGIGDPIPISAASRLGLGELLDAVV 164 >gi|317128319|ref|YP_004094601.1| GTP-binding protein Era [Bacillus cellulosilyticus DSM 2522] gi|315473267|gb|ADU29870.1| GTP-binding protein Era [Bacillus cellulosilyticus DSM 2522] Length = 298 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 17/180 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K +A S+ T++ V + + + +D Sbjct: 8 VALIGRPNVGKSTLLNEVLGQK-IAIMSDKAQTTRNRIQGVYTE------DRGQVIFIDT 60 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + I + + + + L+D + G + D+ + L Sbjct: 61 PGI---HKPKHRLGDFMMKIAQ--TTLKEVDAILFLVDAKEGRGKGDEFIMEKLKHVTTP 115 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +++ KID++ P ++ + EVIP S++ +E L + + ++ Sbjct: 116 IFLIVNKIDEVHPDELFLLIDDYRKRFE-----FTEVIPISALYGNNVETLLDQVFKYLD 170 >gi|270291293|ref|ZP_06197515.1| ribosome-associated GTPase EngA [Pediococcus acidilactici 7_4] gi|304385042|ref|ZP_07367388.1| ribosome-associated GTPase EngA [Pediococcus acidilactici DSM 20284] gi|270280139|gb|EFA25975.1| ribosome-associated GTPase EngA [Pediococcus acidilactici 7_4] gi|304329236|gb|EFL96456.1| ribosome-associated GTPase EngA [Pediococcus acidilactici DSM 20284] Length = 435 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 74/183 (40%), Gaps = 13/183 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N ++ + + S+ G T+ + +N Sbjct: 171 DDEAIRFSLIGRPNVGKSSLVNAILGEQRV-IVSDIAGTTRDAI------DTRFTSNGDE 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G +N + + + R + V ++++ G+++ D+ + + Sbjct: 224 FVMVDTAGMRKKGKIYENTERYSVM--RAMKAIDNSNVVLVVLNAEEGIREQDKRIAGYA 281 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + + IV+ K DKL +L + IR ++ +I S+V ++ + L Sbjct: 282 HEAGRAIVIVVNKWDKLKKD--NHSLSNFEQSIRQEFAYLSYAPIIFVSAVTKQRLSQLP 339 Query: 204 KAI 206 I Sbjct: 340 ALI 342 Score = 92.5 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 66/182 (36%), Gaps = 25/182 (13%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 G P +A GR NVGKS++ N + + ++ + PG T+ + ++ K Sbjct: 2 GNPTVAIVGRPNVGKSTIFNRIAGER-ISIVEDTPGVTRDRI-YTHSEWLGRK-----FN 54 Query: 88 LVDMPGYGYARAP--KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G P ++ D I + ++ R GV D+ V L Sbjct: 55 LIDTGGIQIGEEPFLEEIRDQAELAINE-------ADVIIFIVSVREGVSDADEAVAKIL 107 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 K + + K+D +P Q + Y + P S G+ L A Sbjct: 108 YKADKPVILAVNKVD--NPELRQ-------DIYDFYSLGFGDPYPLSGSHGLGLGDLLDA 158 Query: 206 IL 207 ++ Sbjct: 159 VI 160 >gi|291288774|ref|YP_003505590.1| ribosome-associated GTPase EngA [Denitrovibrio acetiphilus DSM 12809] gi|290885934|gb|ADD69634.1| ribosome-associated GTPase EngA [Denitrovibrio acetiphilus DSM 12809] Length = 450 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 67/179 (37%), Gaps = 21/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L N L K LA + PG T+ F + +VD Sbjct: 4 VGIIGRPNVGKSTLFNRLAG-KRLAIVDDMPGVTRDRIEFTT------EWEGEKFRIVDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + + ++ S L+ D GV +D+ V L K Sbjct: 57 AG--FDLKEELVKKEMQQ---QFYSALDEADYFILMADGTEGVHPLDEIVIDLLRHKNKP 111 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +Q+V+ K+D S ++ Y +I S+ + +++L I++ I Sbjct: 112 FQLVVNKVDSDSKED---------FIYDFYRMGVEHIIAISASHGRNVDMLLDEIIKFI 161 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 81/211 (38%), Gaps = 38/211 (18%) Query: 25 PKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHL--NFFVPKDFSNLKNN 82 P G +I +GR NVGKSS+IN + + L + PG T+ FF + Sbjct: 170 PYEGRIKIVVTGRPNVGKSSMINKWLGEERL-IVTPIPGTTRDAVDTFFEL--------D 220 Query: 83 LPAMALVDMPGYGYAR-APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDV 141 L+D G + K ++ +G + ER+ + LID G+ + D V Sbjct: 221 GDKYVLIDTAGIRKKKSMFKDKIEKYGYYRWKDAVERADIS--VCLIDAEEGITERDVKV 278 Query: 142 FSFLDKKAVSYQIVLTKIDKL--SPTTAQETLEKTKYLIRNYPTAHPEVIPTS------- 192 + + +V+ K D + A+ L+ Y ++ +P +I TS Sbjct: 279 IADTWEAGRPVILVVNKWDLIEDKDDAAKAFLKDVDYKLQ--FLNNPSMIFTSTITGKNI 336 Query: 193 -------------SVKRKGIEVLRKAILETI 210 + KR G L++ I E + Sbjct: 337 YKIFKAAKDLYIEASKRIGTHKLQQIIEEAV 367 >gi|163784387|ref|ZP_02179279.1| GTP-binding protein Era [Hydrogenivirga sp. 128-5-R1-1] gi|159880342|gb|EDP73954.1| GTP-binding protein Era [Hydrogenivirga sp. 128-5-R1-1] Length = 312 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 74/180 (41%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ K ++ S P T+ V D + +D Sbjct: 22 VALVGRPNVGKSTLLNNILGVK-VSIVSPKPQTTRMRILGVKHDKD------AQIIFLDT 74 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS-FLDKKAV 150 PG + ++ +S + ++ID G + D + +L K Sbjct: 75 PGVQKGKD-----ILTKTVVESAVSSMEEADLIAMIIDATKGWTKNDLQIVDNYLKKLDK 129 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ K+DK+ +E++ + E++P S++K ++ L + I + + Sbjct: 130 PVILIINKVDKVPKELLLPLIEQSTKI-----YEFKEIVPISALKGVNLDRLTQVIKKYL 184 >gi|229543990|ref|ZP_04433049.1| small GTP-binding protein [Bacillus coagulans 36D1] gi|229325129|gb|EEN90805.1| small GTP-binding protein [Bacillus coagulans 36D1] Length = 436 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 74/191 (38%), Gaps = 20/191 (10%) Query: 21 IGLLPK-------AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + P+ + F GR NVGKSSL N ++ + + S+ G T+ V Sbjct: 160 VKHFPEKADEEYGEDVIKFCFIGRPNVGKSSLFNAILGEERV-IVSDIEGTTRDAVDTVY 218 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 ++D G +N + + L R L V ++++ G Sbjct: 219 T------YEDQTYVMIDTAGMRKKGKVYENTEKYSVL--RALRAIERSDVVCVVLNGEEG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPT 191 +++ D+ + + + IV+ K D + +T+ + IR++ + VI Sbjct: 271 IREQDKRIAGYAHEAGRGVIIVVNKWDAVQKDE--KTMNQFTQKIRDHFQFLDYAPVIYV 328 Query: 192 SSVKRKGIEVL 202 S+ +K ++ L Sbjct: 329 SAKTKKRLDQL 339 Score = 94.8 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 65/180 (36%), Gaps = 21/180 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + P ++ + N+ + Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-VSIVEDVPGVTRDRI-YSPAEWLTHEFNVIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + ++ + + + R GV D+ V L + Sbjct: 62 DIGDEPFLEQIRQQAEI----------AIQEADVIIFITSGREGVTSADEMVAKILYRSK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + K+D E + Y + P S G+ L A+++ Sbjct: 112 KPVVLAVNKVD---------NPEMRTQIYDFYALGFGDPFPISGAHGLGLGDLLDAVVKH 162 >gi|299538553|ref|ZP_07051836.1| GTP-binding protein EngA [Lysinibacillus fusiformis ZC1] gi|298726140|gb|EFI66732.1| GTP-binding protein EngA [Lysinibacillus fusiformis ZC1] Length = 436 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 71/182 (39%), Gaps = 13/182 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 + + GR NVGKSSL+N + ++ + SN G T+ + + Sbjct: 173 DDVIKFSLIGRPNVGKSSLVNAFLGQERV-IVSNIAGTTRDAI------DTPYAYDGQEY 225 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 ++D G + + + L R L V ++++ G+++ D+ + + Sbjct: 226 VIIDTAGMRKKGKIYETTEKYSVL--RALRAIERSDVVLVVLNAEEGIQEQDKKIAGYAH 283 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLRK 204 + + IV+ K D + +T+ IR + + +I S+ ++ + + Sbjct: 284 EAGKAVIIVVNKWDAIEKDE--KTMNVFTQQIREHFLFLDYAPIIFVSANTKQRVHQILP 341 Query: 205 AI 206 I Sbjct: 342 II 343 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 59/176 (33%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + PG T+ + S+ + ++ Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGVTRDRIY------SSAEWLTHDFNII 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P I + + + R GV D+ V L K Sbjct: 57 DTGGIEIGDEPFLEQIRQQAEI-----AIDEADVIIFMTNGREGVTAADEQVAKILYKTK 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + KID + + + Y E P S G+ L Sbjct: 112 KPVVLAVNKID---------NPDMREMIYDFYALGFGEPWPISGSHGLGLGDLLDE 158 >gi|332799113|ref|YP_004460612.1| GTP-binding protein engA [Tepidanaerobacter sp. Re1] gi|332696848|gb|AEE91305.1| GTP-binding protein engA [Tepidanaerobacter sp. Re1] Length = 439 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 76/189 (40%), Gaps = 17/189 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++A G+ NVGKSSL+N ++ + + S+ PG T+ S + N Sbjct: 172 DEDIIKVAIIGKPNVGKSSLLNAILGEERV-IVSDIPGTTRDAI------DSYFEINGKK 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 M +D G ++V+ + VR L V +++D + + D+ + Sbjct: 225 MLFIDTAGLRKKSRISEDVEYYS--TVRALGAIDRADVVLMVLDASQNISEQDKRIAGIA 282 Query: 146 DKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 + + I++ K D + T E +K K + + ++ S+ + + Sbjct: 283 HEAGKAVIIIVNKWDLIDKDSHTTDEFSKKIKNELA--FMQYAPIVYVSAKTGQRV---- 336 Query: 204 KAILETINY 212 ILE IN+ Sbjct: 337 GRILELINF 345 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+L N ++ K ++ + PG T+ + + N +VD Sbjct: 5 VAVVGKPNVGKSTLFNRIIG-KRISIVDDKPGVTRDRIY------GEAEWNGKKFTMVDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A K + S + E + L + ++D + G+ D DV L + Sbjct: 58 GGVEPA--SKDIILSQMKRQADFAIETANL--ILFMVDGKEGLTPTDLDVAQILRRSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D T Y Y + I S+V + L I + I Sbjct: 114 VLLVVNKVD---------NYTNTAYDYEFYKLGFGDPIFISAVHGLAVGDLLDKITDYI 163 >gi|294776607|ref|ZP_06742076.1| small GTP-binding protein domain protein [Bacteroides vulgatus PC510] gi|294449522|gb|EFG18053.1| small GTP-binding protein domain protein [Bacteroides vulgatus PC510] Length = 396 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 22/191 (11%) Query: 20 EIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL 79 + P A I G+ N GKSSLIN L + + A S+ PG T + Sbjct: 2 SLNNTPAANRLHIVLFGKRNSGKSSLINALTGQ-DTALVSDIPGTTTD----AVSKAMEI 56 Query: 80 KNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQ 139 ++ P + +D PG+ + I R L LL C G + ++ Sbjct: 57 QHIGPCL-FIDTPGFDDEGELGEMR------ITRTLKAIERTDIALLL--CEDGNCEDEK 107 Query: 140 DVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 L+K+ + ++L K D ++ + T+ I +P +I S+ ++ GI Sbjct: 108 QWMEQLNKRNIPVILILNKAD------IRKDIASTRDCIEKECGQNPLII--SAKEQTGI 159 Query: 200 EVLRKAILETI 210 E + +AILE + Sbjct: 160 EKILQAILEKL 170 >gi|257784531|ref|YP_003179748.1| small GTP-binding protein [Atopobium parvulum DSM 20469] gi|257473038|gb|ACV51157.1| small GTP-binding protein [Atopobium parvulum DSM 20469] Length = 441 Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 13/186 (6%) Query: 19 PEIGLLPKAGPPE-IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFS 77 PE P+ +A GR NVGKSSL N L N+K + S+ G T+ + Sbjct: 167 PEADEEPEDDGILNLAIIGRPNVGKSSLANRLANKKR-SIVSDVAGTTRDAI------DT 219 Query: 78 NLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQI 137 ++ + LVD G ++V+ + +VR L L++D GV + Sbjct: 220 MIEWKGTPIRLVDTAGIRKKSQVHEDVEYYS--LVRGLQAMDRADICLLVVDASVGVTEQ 277 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKL-SPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 DQ + + ++ + ++L K D + S T E + P I S++ Sbjct: 278 DQKLANMAVERGCALVLLLNKWDLIDSETKRDEVAASVAKRLAFAPWIAS--INVSALTG 335 Query: 197 KGIEVL 202 + I+ + Sbjct: 336 RSIDKV 341 Score = 94.5 bits (234), Expect = 9e-18, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 20/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L+N + K A + G T+ ++ + N L+ Sbjct: 4 PIVAIVGRPNVGKSTLVNRIA-EKRDAIVHESRGVTRDRSYH------DADWNGREFKLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLI-VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G K+ D + I + L + ++D GV D++V + K Sbjct: 57 DTGGI----ESIKSQDRFAPHIREQALLACDEADVIVFVVDGTTGVTDEDEEVARIVRKS 112 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 +V+ K D +P T Q+ L Y E +P S+ G L I+ Sbjct: 113 TKPVFLVVNKKD--NPATEQDGL------WDFYALGCGEPMPLSASHGHGTGDLLDDIVN 164 Query: 209 T 209 Sbjct: 165 A 165 >gi|224541354|ref|ZP_03681893.1| hypothetical protein CATMIT_00514 [Catenibacterium mitsuokai DSM 15897] gi|224525688|gb|EEF94793.1| hypothetical protein CATMIT_00514 [Catenibacterium mitsuokai DSM 15897] Length = 435 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 76/181 (41%), Gaps = 13/181 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +++ GR NVGKSSL N ++ + SN G T+ + + + ++D Sbjct: 176 KVSIIGRPNVGKSSLTNAILGEDRV-IVSNIEGTTRDAI------DTAFEKDGYKYRIID 228 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G +N++ + L R L + ++D G+ + D+ V + + Sbjct: 229 TAGMRKKGKVYENIEKYSVL--RALKAVEQSDVILCVVDGERGIIEQDKHVAGYAHELGK 286 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLRKAILE 208 S +V+ K D ++ +T+ K + +R + + S++K++ I L I+E Sbjct: 287 SVVLVVNKWDAVTKDE--KTMAKMEKNLREQFKYLDYARIAFVSALKKQRINTLFDLIVE 344 Query: 209 T 209 Sbjct: 345 A 345 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 21/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR+NVGKS+L N ++ + ++ + PG T+ + + ++D Sbjct: 6 VAIVGRANVGKSTLFNRIIGER-VSIVEDVPGVTRDRIYAKASWLTK------EFRIIDT 58 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A I + +++ R G+ D V L K Sbjct: 59 GGIELKNADFTEQIKTQAEI-----AIEEADVIIFVVNGREGLTSEDNFVARMLQKSGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + KID + + Y E IP SS G+ L ++ + Sbjct: 114 VLLAVNKID---------DVAFRDNIYDFYSLGIGEPIPVSSAHGIGVGDLLDEVIRVL 163 >gi|239993709|ref|ZP_04714233.1| GTP-binding protein Era [Alteromonas macleodii ATCC 27126] Length = 303 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 78/179 (43%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K ++ TS P T+H + D VD Sbjct: 11 VAIVGRPNVGKSTLLNRLLGQK-VSITSRKPQTTRHRILGIDTD------GDYQAIYVDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + + S + + V +++ D+ V S + + + Sbjct: 64 PGLHQ----DEKRAINRYMNRAASSSLAEVGLVLFVVEGDR-FNAEDEMVLSKVKQANLP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ K+DK+ + + K L +P H +IP S+ + + ++ +R+ + +++ Sbjct: 119 CYLIVNKMDKV--EDKENFMVHLKKLGEKHPFEH--MIPISAKQGRMVDEIRELVAKSL 173 >gi|222528757|ref|YP_002572639.1| GTP-binding protein EngA [Caldicellulosiruptor bescii DSM 6725] gi|222455604|gb|ACM59866.1| small GTP-binding protein [Caldicellulosiruptor bescii DSM 6725] Length = 440 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 26/185 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L+ + A + PG T+ + ++ Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERR-AIVDDTPGITRDRII------GETEWRGITFNVI 55 Query: 90 DMPGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G K+ I + ++D + G+ D++V + L Sbjct: 56 DTGGIEPYSEDIILKQMRRQAQFAIDMS-------DVIIFMVDGKTGLTDADREVANMLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + KID +S + Y + I S+ G+ + A+ Sbjct: 109 TSKKPIVLAVNKIDNISQQAM---------IYEFYELGLSDPIAMSAEHGTGVGDVLDAV 159 Query: 207 LETIN 211 + +N Sbjct: 160 VNYLN 164 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 13/184 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G ++A G+ N GKSSL+N ++ + + S+ PG T+ S + Sbjct: 172 EEGTIKVAIIGKPNTGKSSLVNYILGEERV-IVSDIPGTTRDAI------DSTFEFEGIP 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G NV+ + ++R L +L+D V + D V + Sbjct: 225 ITLIDTAGLRRKSKIYDNVERYS--MLRTLQAIERSDICIILLDGTENVSEQDAKVAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 + + + K D + +T ++ K I V+ S+ ++ L Sbjct: 283 YEAGKGCIVAVNKWDAVEKDE--KTADEYKKQIEEKLSFLKFAPVLFISAKTGFRVKKLL 340 Query: 204 KAIL 207 + +L Sbjct: 341 ETVL 344 >gi|258515338|ref|YP_003191560.1| GTP-binding protein EngA [Desulfotomaculum acetoxidans DSM 771] gi|257779043|gb|ACV62937.1| small GTP-binding protein [Desulfotomaculum acetoxidans DSM 771] Length = 443 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 76/187 (40%), Gaps = 13/187 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 +IA GR NVGKSSL+N ++ ++ + SN PG T+ + + + Sbjct: 175 DPDVIKIAVIGRPNVGKSSLVNSILGQERV-IVSNVPGTTRDAI------DTPFERDDKH 227 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + + + L +RS + + L D GV D+ + + Sbjct: 228 YVLIDTAGIRRKSRIYISTEKYSVLRSLKAIDRSDVALIVL--DAEEGVTDQDKRIAGYA 285 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 +K + I++ K D + ++ K + V+ S++ R+ + Sbjct: 286 HEKGKASIIIINKWDLIEKDDHTMSIFTRKIREEMGFITYAPVLFISALTRQRVH----R 341 Query: 206 ILETINY 212 +LE ++Y Sbjct: 342 VLELVDY 348 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 18/181 (9%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N +V +A PG T+ + + + + LV Sbjct: 4 PIVAIVGRPNVGKSTLFNRIVG-ARVAIVEGQPGITRDRLY------QEAEWSGRSFMLV 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + ++N + + + V ++D R G+ D++V + L + Sbjct: 57 DTGGIDF----QENDEIVSNVRHQARLAIEEADLVLFVVDARSGLLGSDEEVANILRRTD 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K++ S LE + Y E IP S+ + K L ++ Sbjct: 113 TPVLLVANKVENFS-------LEDNPQFLEFYSLGLGEPIPVSAAEGKNTGDLLDQVITL 165 Query: 210 I 210 + Sbjct: 166 L 166 >gi|218262398|ref|ZP_03476878.1| hypothetical protein PRABACTJOHN_02553 [Parabacteroides johnsonii DSM 18315] gi|218223401|gb|EEC96051.1| hypothetical protein PRABACTJOHN_02553 [Parabacteroides johnsonii DSM 18315] Length = 437 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 19/194 (9%) Query: 21 IGLLPKAGP-------PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVP 73 + LP P P IA GR N GKSSLIN + ++ G T+ + Sbjct: 160 VATLPDDKPEVLEEELPRIAIIGRPNAGKSSLINAFIGEDR-HIVTDIAGTTRDSIYTKY 218 Query: 74 KDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG 133 F LVD G ++++ + ++R + L++D G Sbjct: 219 NKFGL------NFYLVDTAGIRKKGKVNEDLEYYS--VIRSIRAIENSDVCVLMLDATRG 270 Query: 134 VKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPT 191 ++ D ++FS + K + + K D + +Q+ ++ IR P ++ Sbjct: 271 IESQDLNIFSLVQKNKKGLVVCVNKWDLVED-KSQKVIDTFMNAIRERLAPFTDFPILFI 329 Query: 192 SSVKRKGIEVLRKA 205 S++ ++ I + + Sbjct: 330 SALTKQRILKVLET 343 Score = 91.4 bits (226), Expect = 8e-17, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A + G T+ + + S + + V Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QTRQAIVNEEAGTTRDRQYGKVEWTSKEFSLIDTGGWVIN 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 + K V + ++D +GV +D +V + L + Sbjct: 64 SDDVFEEEINKQVKI----------ALEEADVILFVVDVLNGVTDLDNEVAAILRRAKKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D E Y + S++ L I+ T+ Sbjct: 114 VIVVANKAD---------NFELHPSSAEFYSFGLGDPFCVSAINGSCTGDLLDKIVATL 163 >gi|27379163|ref|NP_770692.1| GTP-binding protein EngA [Bradyrhizobium japonicum USDA 110] gi|37999663|sp|Q89MZ0|DER_BRAJA RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|27352313|dbj|BAC49317.1| GTP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 460 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N LV +K LA + PG T+ + ++D Sbjct: 5 IAIIGRPNVGKSTLFNRLVGQK-LALVDDLPGVTRDRR------EGEARLGDLEFTIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A + + ++ ++D R G+ D+ F + Sbjct: 58 AGLD-EGAKGSLTARMQEQTEAAI---AQADALFFVVDARIGLTPTDRAFADFARRANKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K E + + + I S+ +G+ L A+ + + Sbjct: 114 VLLVANKS---------EGKHGDAGAMEAFALGLGDPIQISAEHGEGMGELYDALAKLM 163 Score = 99.5 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 70/183 (38%), Gaps = 12/183 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P +A GR N GKS+LIN L+ + L TS G T+ + + Sbjct: 187 PIRVAIVGRPNAGKSTLINHLLGEERL-LTSPEAGTTRDSI------AVEINWKGREFRV 239 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 D G ++ ++ + L V L++D ++ ++ D + ++++ Sbjct: 240 FDTAGLRRRSRIEEKLEKLS--VADALRAVRFAEVVVLMMDTQNRFEEQDLRIADLVERE 297 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLRKAI 206 + + K D L T + + ++ ++ S + +GI+ L +AI Sbjct: 298 GRALVLAANKWD-LMETKGGGAISGLRRDADHWLPQVKGVPIVAVSGLMGEGIDRLMQAI 356 Query: 207 LET 209 + Sbjct: 357 QDA 359 >gi|325293656|ref|YP_004279520.1| GTP-binding protein engA [Agrobacterium sp. H13-3] gi|325061509|gb|ADY65200.1| GTP-binding protein engA [Agrobacterium sp. H13-3] Length = 476 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ + K ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGDAKLVDLRFTIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + W + ++D + G+ D+ + L ++ Sbjct: 58 AGLEQSGPETLQGRMWAQTE----AAIDEADVTLFVVDAKAGLTPADETLAEMLRRRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E + + S+ +G+ LR AI+E I Sbjct: 114 VVLVANKS---------EARGSDAGFYDAFTLGLGDPCAISAEHGQGMIDLRDAIVEAIG 164 Score = 92.5 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 9/184 (4%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P +A GR N GKS+LIN + L T G T+ V D+ Sbjct: 201 ETKPLRVAIIGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSIS-VEWDWRG-----RT 253 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + + D G + ++ + L V ++ D ++ D + + Sbjct: 254 IKMFDTAGMRRKARVTEKLEKLS--VADSLRSIRFAETVVIVFDSTIPFEKQDLQLVDLV 311 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + + K D + A + K +P S G++ L + Sbjct: 312 IREGRAAVLAFNKWDLVEDPQAFLADLREKTERLLPQARGIRAVPMSGQTGYGLDRLMQN 371 Query: 206 ILET 209 I++T Sbjct: 372 IIDT 375 >gi|310827223|ref|YP_003959580.1| hypothetical protein ELI_1631 [Eubacterium limosum KIST612] gi|308738957|gb|ADO36617.1| hypothetical protein ELI_1631 [Eubacterium limosum KIST612] Length = 439 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 17/189 (8%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA G+ N GKS+LIN +V L S+ PG T+ + ++ N Sbjct: 174 EDDNLKIAVIGKPNAGKSTLINKMVGHDRL-IVSDVPGTTRDAI------DTEVRFNGRD 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++++ + IVR ++ V +LID GV + D + Sbjct: 227 YTLIDTAGLRKKKKIYEDIERYS--IVRAIAAVDRSDVVLVLIDGEKGVTEQDAKIAGIA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 ++ I++ K D + T +T++K K IR+ + ++ S+ + + Sbjct: 285 HNRSKPSIIIVNKWDIVEKDT--KTMDKMKREIRDTLSFIDYAPILFISAKTGQRV---- 338 Query: 204 KAILETINY 212 I ETI++ Sbjct: 339 SKIYETIDF 347 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 20/181 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N LV + +A + PG T+ ++ N L+ Sbjct: 4 PIVAVVGRPNVGKSTLFNKLVGER-IAIVEDTPGVTRDRI-IADAEWQNHH-----FTLI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P D + V+ + LL+D R G+ D +V + + K + Sbjct: 57 DTGGI----EPHTKDDILLQMRVQAELAIDMADLIVLLVDGREGMTASDLEVANMIRKHS 112 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 + + + K+D + LE + Y E I S+ + G+ ++E Sbjct: 113 KNVLLAVNKVD-------SQQLEN--NIFEFYNLGIGEPIAISAEQGLGLGDFLDEVIER 163 Query: 210 I 210 + Sbjct: 164 V 164 >gi|328957352|ref|YP_004374738.1| GTP-binding protein EngA [Carnobacterium sp. 17-4] gi|328673676|gb|AEB29722.1| GTP-binding protein EngA [Carnobacterium sp. 17-4] Length = 437 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 75/184 (40%), Gaps = 12/184 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + + GR NVGKSSL+N ++ + S+ G T+ D + + + Sbjct: 172 DDSVIKFSLIGRPNVGKSSLVNAILGEDRV-IVSSIAGTTRDAI-----DTAFVGEDGTE 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G +N + + L R L V +++ G+++ D+ V + Sbjct: 226 FVMIDTAGMRKKGKVYENTERYSVL--RALRAIERSDVVLCVLNAEEGIREQDKKVAGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIPTSSVKRKGIEVLR 203 + IV+ K D L T++ + IR+ ++ +I S++ ++ + L Sbjct: 284 HEAGKGIIIVVNKWDTLEKD--NHTMKAFEEQIRSEFLYLSYAPIIFVSALTKQRLNKLP 341 Query: 204 KAIL 207 + I Sbjct: 342 EIIE 345 Score = 86.7 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N +V + ++ + G T+ + P ++ + N+ + Sbjct: 4 PVVAIVGRPNVGKSTIFNRIVGER-ISIVEDVSGVTRDRI-YAPAEWLGKEFNVIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + K + + + + + D++V L + Sbjct: 62 DLGDEPFLEQIKYQAEI----------AMDEADVIIFITSVKEHITDADENVAKILYRTN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S GI L A Sbjct: 112 KPVLLAVNKVD---------NPEMRNDIFDFYSLGLGEPFPISGSHGLGIGDLLDA 158 >gi|156743465|ref|YP_001433594.1| GTP-binding protein EngA [Roseiflexus castenholzii DSM 13941] gi|156234793|gb|ABU59576.1| small GTP-binding protein [Roseiflexus castenholzii DSM 13941] Length = 494 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 22/186 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA-L 88 P +A GR NVGKS+L N L+ + A + PG T+ + + + + L Sbjct: 3 PIVALVGRPNVGKSTLFNRLIGERR-AIVEDIPGTTRDRLYGDTEWNGRVFTVVDTAGLL 61 Query: 89 VD----MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSF 144 +D PG ++ + I + ++D R G+ D V Sbjct: 62 LDEDDLTPGTPQLEIARRVREQAELAIAES-------DAIIFIVDSREGLTAADAAVAEV 114 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L + + K D E+ + Y E IP S+ G+ + Sbjct: 115 LRRTDKPVVLAANKAD---------NHERAMNAVEFYALNLGEPIPMSAYHGIGVGDVLD 165 Query: 205 AILETI 210 + E + Sbjct: 166 RVTEAL 171 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 68/175 (38%), Gaps = 13/175 (7%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 +IA GR NVGKSSL+N L+ ++ + S+ PG T+ + ++ L+D Sbjct: 184 KIAIVGRPNVGKSSLLNRLIGQER-SVVSDIPGTTRDSI------DTPIEIGGVRALLID 236 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G + ++ + + R L LLID GV D + + + Sbjct: 237 TAGIRRRGKIDRGLERYSVM--RALRAIERADVALLLIDATEGVTAQDTHIAGMILESLK 294 Query: 151 SYQIVLTKIDKLSPTT--AQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLR 203 I++ K D + + + + ++ ++ S+ + ++ + Sbjct: 295 GVAILVNKWDLVVKDAYTFDQFSRHVREAFK--FMSYAPLLFISAKTGQRVDKVL 347 >gi|188583713|ref|YP_001927158.1| GTP-binding protein EngA [Methylobacterium populi BJ001] gi|179347211|gb|ACB82623.1| small GTP-binding protein [Methylobacterium populi BJ001] Length = 446 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 65/183 (35%), Gaps = 20/183 (10%) Query: 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 P +A GR NVGKS+L N LV RK LA + PG T+ A Sbjct: 2 DLPTVAIVGRPNVGKSTLFNRLVGRK-LALVDDRPGVTRDRR------EGEGFIGDVAFR 54 Query: 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 ++D G A A G + + + V +ID R GV D+ + + Sbjct: 55 VIDTAGLEEADADS----LLGRMRAQTEAAILEADAVLFVIDARAGVLPADRPFAELVRR 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 ++ K E + + IP S+ +G+ L+ A+ Sbjct: 111 SGCPVILIANK---------AEGGAGMAGAYEAFSLGLGDPIPFSAEHGEGLGSLQDALR 161 Query: 208 ETI 210 E + Sbjct: 162 EVL 164 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 66/180 (36%), Gaps = 13/180 (7%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR N GKS+LIN ++ L G T+ + + + L D Sbjct: 182 VAIVGRPNAGKSTLINRMIGEDRL-LVGPEAGITRDSI------SLDWEWRGRRIKLHDT 234 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G ++ + L V +L+D ++ D + ++ + + Sbjct: 235 AGMRRRARIDDKLEKLA--VSDGLRAVRFAEVVVVLLDATIPFEKQDLTIVDLVESEGRA 292 Query: 152 YQIVLTKIDKLS--PTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I L K D ++ P + E L+ V+P S + GI+ L +A+++ Sbjct: 293 LVIGLNKWDLVADQPGLLKSLREDCTRLLPQVRG--VSVVPLSGLAGDGIDKLMQAVVDA 350 >gi|307822499|ref|ZP_07652730.1| ribosome-associated GTPase EngA [Methylobacter tundripaludum SV96] gi|307736103|gb|EFO06949.1| ribosome-associated GTPase EngA [Methylobacter tundripaludum SV96] Length = 465 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 67/178 (37%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + + N L+D Sbjct: 178 IAVVGRPNVGKSTLVNRLLGEERV-IVFDEPGTTRDSIYI------PFERNGKKFTLIDT 230 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +++ L V LID R G+ D + + + + Sbjct: 231 AGMRRRSKIAETIEKFS--VIKSLQAIEKANVVIYLIDAREGITDQDAHLLGLVLEAGRA 288 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I L K D +S + + A P S++ G+ + + + Sbjct: 289 LIIGLNKWDGISADQKATIHRQLDVKLSFLEFAEKH--PISALHGSGVGKMFDVVQQL 344 Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 66/184 (35%), Gaps = 25/184 (13%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P IA GR NVGKS+L N L ++ A ++ G T+ + +K + Sbjct: 2 LPVIALVGRPNVGKSTLFNYLTRSRD-ALVADFSGLTRDRQY------GRVKLGDRPCLV 54 Query: 89 VDMPGYGYARA--PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 VD G + V+ ++D R G+ D+ + L Sbjct: 55 VDTGGIADDAEGIESFARKQVQVALEE-------ADIVFFMVDAREGLSASDKVIADTLR 107 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K +V K+D L +TA Y A E + ++ KGI L + + Sbjct: 108 KLQKPVILVTNKVDGLDASTAASDF---------YSLALGEPVKIAASHGKGIPELLEKV 158 Query: 207 LETI 210 + + Sbjct: 159 NQLL 162 >gi|312128144|ref|YP_003993018.1| ribosome-associated gtpase enga [Caldicellulosiruptor hydrothermalis 108] gi|311778163|gb|ADQ07649.1| ribosome-associated GTPase EngA [Caldicellulosiruptor hydrothermalis 108] Length = 440 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 26/185 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L+ + A + PG T+ + ++ Sbjct: 3 PTVAIVGRPNVGKSTLFNRLIGERR-AIVDDTPGITRDRII------GETEWRGITFNVI 55 Query: 90 DMPGYGYARAP---KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G K+ I + ++D + G+ D++V + L Sbjct: 56 DTGGIEPYSEDIILKQMRRQAQFAIDMS-------DVIIFMVDGKTGLTDADREVANMLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 + + KID +S + Y + I S+ G+ + A+ Sbjct: 109 TSKKPIVLAVNKIDNISQQAM---------IYEFYELGLSDPIAMSAEHGTGVGDVLDAV 159 Query: 207 LETIN 211 + +N Sbjct: 160 VNYLN 164 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 13/184 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + G ++A G+ N GKSSL+N ++ + + S+ PG T+ S + Sbjct: 172 EEGTIKVAIIGKPNTGKSSLVNYILGEERV-IVSDIPGTTRDAI------DSTFEFEGIP 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + L+D G NV+ + ++R L +L+D V + D V + Sbjct: 225 ITLIDTAGLRRKSKIYDNVERYS--MLRTLQAIERSDICIILLDGTENVSEQDAKVAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 + + + K D + +T ++ K I V+ S+ ++ L Sbjct: 283 YEAGKGCIVAVNKWDAVEKDE--KTADEYKKQIEEKLSFLKFAPVLFISAKTGFRVKKLL 340 Query: 204 KAIL 207 + +L Sbjct: 341 ETVL 344 >gi|207743439|ref|YP_002259831.1| gtp-binding protein enga (partial sequence c terminus) [Ralstonia solanacearum IPO1609] gi|206594836|emb|CAQ61763.1| putative gtp-binding protein enga (partial sequence c terminus) [Ralstonia solanacearum IPO1609] Length = 363 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + + + N L+D Sbjct: 99 IAIVGRPNVGKSTLVNALIGEERV-IAFDMPGTTRDAIY------VDFERNGKPYTLIDT 151 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D + + D + F+ + + Sbjct: 152 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRA 209 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I + K D L + ++ A V S+ +R GI L K++ + Sbjct: 210 LVIGVNKWDGLDGHARDRIKHDLERKLQ--FLAFANVHYISAKQRTGIGALMKSVDDA 265 Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 12/89 (13%) Query: 123 CVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 V ++D R G+ D+ + +L K + + K E ++ T Y Sbjct: 1 MVIFIVDGRLGLAPQDRVIADYLRKTGRRILLAVNKA---------EGMKYTAVATDFYE 51 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILETIN 211 + SS G+ R + E ++ Sbjct: 52 LGLGDPRAISSAHGDGV---RDLVDEALD 77 >gi|209550425|ref|YP_002282342.1| GTP-binding protein EngA [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238058977|sp|B5ZYX3|DER_RHILW RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|209536181|gb|ACI56116.1| small GTP-binding protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 473 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 20/180 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV +K LA + PG T+ + + ++D Sbjct: 5 VAIVGRPNVGKSTLFNRLVGKK-LALVDDTPGVTRDRR------PGDARLMGLTFTIIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G A G + + + ++D ++G+ +D + L ++ Sbjct: 58 AGLEEADEES----LQGRMRAQTEAAIDEADLSLFVVDAKNGLTPVDTALAEMLRRRGKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +V K E Y E P S+ +G+ LR AI+E I Sbjct: 114 VVLVANKS---------EARGSDSGFYDAYTLGLGEPTPISAEHGEGMLDLRDAIVEAIG 164 Score = 94.1 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 13/186 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P +A GR N GKS+LIN + L T G T+ V D+ Sbjct: 199 DTKPLRVAIVGRPNAGKSTLINRFLGEDRL-LTGPEAGITRDSIS-VEWDWRG-----RT 251 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 + + D G + ++ + L V ++ D ++ D + + Sbjct: 252 IKMFDTAGMRRKARVTEKLEKLS--VADALRAIRFAETVVIVFDATIPFEKQDLQIVDLV 309 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 ++ + + K D + Q L + +P S G++ L Sbjct: 310 LREGRAAVLAFNKWDMI--EDRQAVLADLREKTDRLLPQARGIRAVPISGQTGWGLDKLM 367 Query: 204 KAILET 209 ++I++T Sbjct: 368 QSIIDT 373 >gi|149908865|ref|ZP_01897525.1| GTP-binding protein EngA [Moritella sp. PE36] gi|149808139|gb|EDM68080.1| GTP-binding protein EngA [Moritella sp. PE36] Length = 493 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 11/183 (6%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A G NVGKS+L+N ++ + + + PG T+ + ++ L Sbjct: 205 PIKLAMIGCPNVGKSTLVNRILGEERVV-VYDMPGTTRDSIYI------PMERAGRNYML 257 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + + V+ + IV+ L V +++D R GV D + F Sbjct: 258 IDTAGVRRRKNINEAVEKFS--IVKALQAIDDANVVLMVLDARVGVTSQDLTLLGFAINS 315 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 S I + K D L + + + S++ G+ L ++I E Sbjct: 316 GRSIVIAINKWDGLDAGVKDRIKSELDRRLG--FIDFARIHFISALHGTGVGNLFESITE 373 Query: 209 TIN 211 + Sbjct: 374 AFD 376 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 24/181 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRTRD-ALVADFPGLTRDRKYGQANLAG------REFIVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G ++ +D+ + + L V ++D R G+ DQ + L K+ Sbjct: 56 DTGGI---NGDEEGIDA--KMADQSLLAIEEADAVLFMVDARAGLMVADQAIAEHLRKQQ 110 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V K+D L A + Y A ++ ++ + +GI +L I E Sbjct: 111 KKVFLVANKVDGLDGDVA---------VAEFYALALGDIYQIAASQGRGINIL---IEEA 158 Query: 210 I 210 + Sbjct: 159 L 159 >gi|269792674|ref|YP_003317578.1| GTP-binding protein Era [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100309|gb|ACZ19296.1| GTP-binding protein Era [Thermanaerovibrio acidaminovorans DSM 6589] Length = 303 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 21/182 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKSSL N LV K +A S T+H + + + + LVD Sbjct: 10 VALLGRPNVGKSSLANALVGEKVMA-VSPKAQTTRHAIRGIVQ------GDGYQIVLVDT 62 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDC-RHGVKQIDQDVFSFLDKKAV 150 PG + D +I + + + + ++D G+ +D+ V ++ + Sbjct: 63 PG-----VHEPRHDLGRFMISQIRAALEDVCGICFVVDATSKGISSLDRRVLEWIQEAGR 117 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D L+ + ++ Y V+P S+ + ++VL++A+++ Sbjct: 118 PALLCVNKVDLLARK------DDFWDVVALYQDQYRFDAVVPVSATQGTNLDVLKEAMVK 171 Query: 209 TI 210 + Sbjct: 172 WL 173 >gi|154494318|ref|ZP_02033638.1| hypothetical protein PARMER_03672 [Parabacteroides merdae ATCC 43184] gi|154085762|gb|EDN84807.1| hypothetical protein PARMER_03672 [Parabacteroides merdae ATCC 43184] Length = 437 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 72/182 (39%), Gaps = 12/182 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + P IA GR N GKSSLIN + ++ G T+ + F Sbjct: 172 EEELPRIAIIGRPNAGKSSLINAFIGEDR-HIVTDIAGTTRDSIYTKYNKFGL------N 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + ++R + L++D G++ D ++FS + Sbjct: 225 FYLVDTAGIRKKGKVNEDLEYYS--VIRSIRAIENSDVCVLMLDATRGIESQDLNIFSLV 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGIEVLR 203 K + + K D + +Q+ ++ IR P ++ S++ ++ I + Sbjct: 283 QKNKKGLVVCVNKWDLVED-KSQKVIDTFMSAIRERLAPFTDFPILFISALTKQRILKVL 341 Query: 204 KA 205 + Sbjct: 342 ET 343 Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 59/179 (32%), Gaps = 20/179 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N L + A + G T+ + + +L+D Sbjct: 5 VAIVGRPNVGKSTLFNRLT-QTRQAIVNEEAGTTRDRQY------GKAEWTGKEFSLIDT 57 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G+ + + V + ++D +GV +D +V + L + Sbjct: 58 GGWVINSDDVFEEEINKQVKV----ALEEADVILFVVDVLNGVTDLDNEVAAILRRAKKP 113 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K D E Y + S++ L I+ T+ Sbjct: 114 VIVVANKAD---------NFELHPSSAEFYSFGLGDPFCISAINGSCTGDLLDKIVATL 163 >gi|154508812|ref|ZP_02044454.1| hypothetical protein ACTODO_01321 [Actinomyces odontolyticus ATCC 17982] gi|153798446|gb|EDN80866.1| hypothetical protein ACTODO_01321 [Actinomyces odontolyticus ATCC 17982] Length = 517 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 69/184 (37%), Gaps = 21/184 (11%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 AG P +A GR NVGKS+L+N ++ R+ A + PG T+ + + Sbjct: 79 AGLPVLAVVGRPNVGKSTLVNRILGRRE-AVVQDTPGVTRDRVSY------PAEWAGRDF 131 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G+ + I L+ V L++D GV D+ + L Sbjct: 132 TLVDTGGWEIDVKGLDRSVAEQAEIAVDLA-----DAVVLVLDATVGVTASDERIVEMLR 186 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + K+D + QE + E P S++ +G L + Sbjct: 187 AKKKPIILAANKVD----SPLQEADAAY-----LWSLGLGEPHPISALHGRGTGDLLDVV 237 Query: 207 LETI 210 LE + Sbjct: 238 LEVL 241 Score = 97.9 bits (243), Expect = 8e-19, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 9/155 (5%) Query: 24 LPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNL 83 LP GP +A GR NVGKSSL+N L + + + G T+ ++ + Sbjct: 251 LPSGGPRRVALVGRPNVGKSSLLNALAGGERVV-VNELAGTTRDPV------DELIELDG 303 Query: 84 PAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFS 143 + VD G D + + + + +LID + + D V Sbjct: 304 RSWWFVDTAGIRRKMHRTTGADYYASIRTQ--AAIEKAEVALVLIDGSTPLTEQDVRVVQ 361 Query: 144 FLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 + + +V K D + +E + + + Sbjct: 362 QVIDAGRALVVVTNKWDLVDEDRQKEIKNELEREL 396 >gi|42780705|ref|NP_977952.1| GTP-binding protein EngA [Bacillus cereus ATCC 10987] gi|81831124|sp|Q73AZ1|DER_BACC1 RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|42736625|gb|AAS40560.1| GTPase family protein [Bacillus cereus ATCC 10987] Length = 436 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + GR NVGKSSL+N L+ ++ + SN G T+ + + Sbjct: 172 DEDTIRFSLIGRPNVGKSSLVNALLGQERV-IVSNVAGTTRDAV------DTPYSKDGKD 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 ++D G ++ + + L R L V +++D G+ + D+ + + Sbjct: 225 YVIIDTAGMRKKGKVYESTEKYSVL--RALRAIERSDVVLVVLDGEEGIIEQDKKIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + IV+ K D + +T++ + IR + + ++ S+ RK + L Sbjct: 283 HDSGRAVVIVVNKWDAVKKDE--KTMKAFEENIRAHFQFLDYAPIVFLSAKTRKRTQTLI 340 Query: 204 KAILE 208 I E Sbjct: 341 PVIDE 345 Score = 96.0 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 62/176 (35%), Gaps = 21/176 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS++ N +V + ++ + PG T+ + ++ N + N+ + Sbjct: 4 PVIAIVGRPNVGKSTIFNRIVGER-VSIVEDIPGVTRDRI-YSAGEWLNHEFNIIDTGGI 61 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D+ + + I + + + R GV D++V L + Sbjct: 62 DIGDEPFL---TQIRQQAEVAIDE-------ADVIIFMTNGRDGVTAADEEVAKILYRSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 + + K+D E + Y E P S G+ L Sbjct: 112 KPVVLAVNKVD---------NPEMRSDIYDFYALGFGEPFPISGTHGLGLGDLLDE 158 >gi|330443932|ref|YP_004376918.1| GTP-binding protein engA [Chlamydophila pecorum E58] gi|328807042|gb|AEB41215.1| GTP-binding protein engA [Chlamydophila pecorum E58] Length = 483 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 22/176 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKSSL N L +++LA + G T+ + + + + ++D Sbjct: 4 IAILGRPNVGKSSLFNRLC-KRSLAIVNAEEGTTRDRLYGSAQICDS------TIQVIDT 56 Query: 92 PGYGYARAPKKNVDSWGGLI-VRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G K + D + I + L + L++D R G+ + D + L Sbjct: 57 GG-----VNKDSQDHFQKHIFKQALVGAKEADLLLLVVDIRCGITEQDMQLAKLLRPLNK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V K D + + + Y PE++ TS+ K I+ L I Sbjct: 112 PIILVANKAD---------SRKDEFGIHELYSLGIPEIVVTSAAHGKHIDTLVHKI 158 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 13/207 (6%) Query: 4 HTIFTKSAWIFLRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPG 63 +F ++ F P++ L P +IA GR NVGKSS+IN L+N + T N PG Sbjct: 195 EEVFDENHESFFVEDPQLPPLETNQPLKIALIGRPNVGKSSIINGLLNEER-CITDNIPG 253 Query: 64 RTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRC 123 T+ + + +D G ++ K +V+ R+ + Sbjct: 254 TTRDNVDILYTK------EDRSYLFIDTAGLRKMKSVKNSVEWISTSRTEKAISRADI-- 305 Query: 124 VYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP- 182 L++D G+ D+ + S + K+ + +++ K D L + E + ++ P Sbjct: 306 CLLVVDATQGLSSYDKRILSLISKEKKPHILLVNKWD-LMHSIRMEHY--CRDVLATDPY 362 Query: 183 TAHPEVIPTSSVKRKGIEVLRKAILET 209 ++ S++K++ + + +AI E Sbjct: 363 LGQARILCISALKKRNLSQIFRAIDEL 389 >gi|134299998|ref|YP_001113494.1| small GTP-binding protein [Desulfotomaculum reducens MI-1] gi|134052698|gb|ABO50669.1| iron-only hydrogenase maturation protein HydF [Desulfotomaculum reducens MI-1] Length = 409 Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 20/189 (10%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + P+ IA GR N GKSSLIN L ++ ++A SN PG T + + Sbjct: 1 MENTPRGNRLHIAIFGRRNAGKSSLINALTSQ-DIAVVSNIPGTTTDPVYKAMEILPVGP 59 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 + A +D G K+++D V L+ID GV + Sbjct: 60 VVIIDTAGIDDSGDLGELRVKRSMDVLNK-----------ADMVLLVIDAGSGVTDYELK 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + +K + +V KID + ++ +E+ K + + S++ +GI Sbjct: 109 IARRCQEKKLPVVVVFNKID--AHHVTEQQIEEAKTQLA------GPTVVVSALNGQGIG 160 Query: 201 VLRKAILET 209 L+ AI+ T Sbjct: 161 DLKIAIVNT 169 >gi|260771274|ref|ZP_05880201.1| GTP-binding protein Era [Vibrio furnissii CIP 102972] gi|260613871|gb|EEX39063.1| GTP-binding protein Era [Vibrio furnissii CIP 102972] gi|315179119|gb|ADT86033.1| GTP-binding protein Era [Vibrio furnissii NCTC 11218] Length = 321 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 18/180 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K ++ TS P T+H V D VD Sbjct: 30 VAIVGRPNVGKSTLLNNILGQK-ISITSRKPQTTRHRIMGVDTD------GDYQAIYVDT 82 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSER-STLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 PG + + L+ R S S + V+ +++ H D+ V + L Sbjct: 83 PGLHI-----EEKRAINRLMNRAASSSLSDVNLVFFVVEGTH-WTADDEMVLNKLKNANF 136 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 + + K+D + + + L +V+P S+ K +EVLRK + + + Sbjct: 137 PVVLCVNKVDNVK--DRNDVMLHMMELSNKMD--FVDVVPISAKLGKNVEVLRKHVRDHL 192 >gi|227495128|ref|ZP_03925444.1| GTP-binding protein Era [Actinomyces coleocanis DSM 15436] gi|226831580|gb|EEH63963.1| GTP-binding protein Era [Actinomyces coleocanis DSM 15436] Length = 352 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L N LV K +A TS P T+H V + + LVD Sbjct: 60 IAIVGRPNVGKSTLTNALVGEK-IAITSMRPETTRHNVRGVV------HGDDYQLVLVDT 112 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PGY R ++ LSE + + + + D+ + L Sbjct: 113 PGYHRPRTLLGRR--LNEMVRESLSE---VDVIVFCLPSDQKIGPGDEFIARQLRGLRAP 167 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 V TK DK++P E L L E++P S+ K + I+VL++ + + Sbjct: 168 IVAVATKTDKVAPPRLMEHLMDIDKL-----GDFKEIVPVSAHKDRQIDVLKEVLANLM 221 >gi|148653556|ref|YP_001280649.1| GTP-binding protein EngA [Psychrobacter sp. PRwf-1] gi|172048545|sp|A5WGA8|DER_PSYWF RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|148572640|gb|ABQ94699.1| small GTP-binding protein [Psychrobacter sp. PRwf-1] Length = 473 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 70/177 (39%), Gaps = 11/177 (6%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 G ++A GR NVGKS+L+N ++ + + + PG T+ + + N Sbjct: 174 DQGGLKLAIIGRPNVGKSTLVNRMLGEERVV-VYDMPGTTRDSIYI------PFERNGKN 226 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + V+ + +++ L V +ID + G+ D + + Sbjct: 227 YVLIDTAGVRRRGRIDEKVEKFS--VIKALQAIKDANVVVAVIDAQEGIVDQDLHMLGYA 284 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVL 202 + + + K D LS ++ + + + R + +V S++ + L Sbjct: 285 LDAGRAMVVAINKWDGLS--EDKKEMIRIELDRRFNFIPYVKVHFISALHGTNVGNL 339 Score = 88.3 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 66/182 (36%), Gaps = 29/182 (15%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS++ N + + A ++ G T+ + + N + ++ Sbjct: 5 PVVALIGRPNVGKSTIFNQMT-KTRQALVADLSGLTRDRQY------GDATYNNKSFVVI 57 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS-----TLRCVYLLIDCRHGVKQIDQDVFSF 144 D G G D G I Y+S +S + ++D R G+ D ++ Sbjct: 58 DTGGIG-------EADDGRGSIDDYMSAQSHTAIHEADILVFVVDARAGMIGADAEIGKM 110 Query: 145 LDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRK 204 L +V KID + E Y E P ++ +GI L Sbjct: 111 LHTLGKPVYLVANKIDGVHDAAPAE----------FYALGLGEPYPMTASHGRGIANLLD 160 Query: 205 AI 206 + Sbjct: 161 DL 162 >gi|17545938|ref|NP_519340.1| GTP-binding protein EngA [Ralstonia solanacearum GMI1000] gi|26006721|sp|Q8Y026|DER_RALSO RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|17428233|emb|CAD14921.1| putative gtp-binding protein [Ralstonia solanacearum GMI1000] Length = 447 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 11/178 (6%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N L+ + + + PG T+ + + + N L+D Sbjct: 183 IAIVGRPNVGKSTLVNALIGEERV-IAFDMPGTTRDAIY------VDFERNGKPYTLIDT 235 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 G + ++ + +V+ L + V LL+D + + D + F+ + + Sbjct: 236 AGLRKRGKVFEAIEKFS--VVKTLQSIADANVVVLLLDAQQDISDQDAHIAGFIVESGRA 293 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 I + K D L + ++ + V S+ +R GI L K++ + Sbjct: 294 LVIGVNKWDGLDGHARDRIKHDMERKLQ--FLSFANVHYISAKQRTGIGALMKSVDDA 349 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 26/183 (14%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + + Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADMPGLTRD------RHYGEGRVGERPFIAI 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERS---TLRCVYLLIDCRHGVKQIDQDVFSFLD 146 D G+ + R V ++D R G+ D+ + +L Sbjct: 56 DTGGFEPVAKEGIVAEMAK-------QTRQAVVEADVVIFIVDGRLGLAPQDRVIADYLR 108 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 K + + K E ++ T Y + SS G+ L Sbjct: 109 KTGRRILLAVNKA---------EGMKYTAVATDFYELGLGDPRAISSAHGDGVRELVDEA 159 Query: 207 LET 209 L+ Sbjct: 160 LDL 162 >gi|302846043|ref|XP_002954559.1| hypothetical protein VOLCADRAFT_121318 [Volvox carteri f. nagariensis] gi|300260231|gb|EFJ44452.1| hypothetical protein VOLCADRAFT_121318 [Volvox carteri f. nagariensis] Length = 269 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 21/201 (10%) Query: 22 GLLPKAGPPE----------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFF 71 LLP E +A GR NVGKSSL+N + + + + G T+ Sbjct: 32 ELLPPPTGLEQDDAEEQPLAVAIVGRPNVGKSSLLNAIAGEER-SIVCDLSGTTRD---- 86 Query: 72 VPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL-IVRYLSERSTLRCVYLLIDC 130 D + L+D G + D L + R + L+ID Sbjct: 87 -AVDTRVTLPGGQRLTLIDTAGIRKRSRVADSPDGAEQLSVDRAMRAVRRADVAVLVIDA 145 Query: 131 RHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPT--TAQETLEKTKYLIRNYPTAHPEV 188 GV Q D + + S +V+ K D++ P + ++ E K +R+ + V Sbjct: 146 VEGVTQQDFRLSELFASEGKSVVVVVNKWDRVDPRIWSVEKMAENVKTQLRH--VSWASV 203 Query: 189 IPTSSVKRKGIEVLRKAILET 209 + TS++ + +E + +A+L+ Sbjct: 204 VCTSAISGRHVEDVLEAVLDA 224 >gi|148265178|ref|YP_001231884.1| GTP-binding protein Era [Geobacter uraniireducens Rf4] gi|259645947|sp|A5G693|ERA_GEOUR RecName: Full=GTPase Era gi|146398678|gb|ABQ27311.1| GTP-binding protein Era [Geobacter uraniireducens Rf4] Length = 297 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 71/175 (40%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ K + TS+ P T++ + M +D Sbjct: 11 VSIIGRPNVGKSTLLNRILGDK-IVITSDKPQTTRNRIQGI------HNLPGCQMVFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A++ ++ LS + + L++ + + L Sbjct: 64 PGIHRAKS-----KLNKYMVDVALSSIKEVDVILFLVEADAKPANQEGMILELLANADAP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +V+ KID ++ E + L YP E++P S++ G+E L + + Sbjct: 119 VLLVINKIDLVAKEALLERIAAYAAL---YP--FREIVPVSALSGDGVERLVEVV 168 >gi|298490946|ref|YP_003721123.1| tRNA modification GTPase TrmE ['Nostoc azollae' 0708] gi|298232864|gb|ADI64000.1| tRNA modification GTPase TrmE ['Nostoc azollae' 0708] Length = 464 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N ++ + A ++ PG T+ + S L + ++D Sbjct: 227 KVAIVGRPNVGKSSLLNAW-SQSDRAIVTDLPGTTRDVV------ESQLVVGGIPVQVLD 279 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R V+ G + R S V ID G Q DQ+++ + + Sbjct: 280 TAGI---RETADQVEKIG--VERSRRASSAADLVLFTIDASAGWTQADQEIYEQVKHR-- 332 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID +S Q K + I T++ + +GI+ L A+LE + Sbjct: 333 PVILVINKIDLISIAEKQTLQSKIQSPKSK--------IVTAAAQNQGIDSLETAVLEIV 384 >gi|83590125|ref|YP_430134.1| small GTP-binding protein domain-containing protein [Moorella thermoacetica ATCC 39073] gi|83573039|gb|ABC19591.1| iron-only hydrogenase maturation protein HydF [Moorella thermoacetica ATCC 39073] Length = 405 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 22/189 (11%) Query: 21 IGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLK 80 + P+ IA GR N GKSSLIN L N+ +LA S+ PG T + Sbjct: 1 MDTTPRGNRLHIAIFGRRNAGKSSLINALTNQ-DLAVVSSVPGTTTDPVMKSMEILPLGP 59 Query: 81 NNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQD 140 L A +D G KK ++ + R+ L L++D G + + Sbjct: 60 VVLIDTAGIDDVGELGTLRVKKTME---------VLRRTDL--AILVLDPAAGAGPYELE 108 Query: 141 VFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 + L ++ + IVL KID E L + + V+P S++ R+GIE Sbjct: 109 LQQRLKEERLPLVIVLNKID----QGGMELLPGLEKTLGQR------VLPVSALTRQGIE 158 Query: 201 VLRKAILET 209 L+ +++ Sbjct: 159 ELKGELIKA 167 >gi|15613930|ref|NP_242233.1| Era/ThdF family GTP-binding protein [Bacillus halodurans C-125] gi|13959358|sp|Q9KD52|ERA_BACHD RecName: Full=GTPase Era gi|10173983|dbj|BAB05086.1| GTP-binding protein (Era/ThdF family) [Bacillus halodurans C-125] Length = 304 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ +K +A S+ P T++ V + + +D Sbjct: 13 VSIIGRPNVGKSTLLNHVIGQK-IAIMSDKPQTTRNKIQGVYT------SEDSQIVFIDT 65 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + K D + L E + + ++D ++ + L + Sbjct: 66 PGIHKPK--HKLGDFMMKVAQNTLKE---VDLILYVVDGAEAFGPGEEFIIERLKEAKTP 120 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KIDK+ P +E + + EV+P S+++ + L I + + Sbjct: 121 VILVINKIDKVHPDDLLSLIETYR-----HKHEFEEVVPVSALQGNNVPTLLLEITKHL 174 >gi|21228817|ref|NP_634739.1| GTP-binding protein [Methanosarcina mazei Go1] gi|25452939|sp|Q8PTK0|ENGB_METMA RecName: Full=Probable GTP-binding protein EngB gi|20907337|gb|AAM32411.1| hypothetical protein MM_2715 [Methanosarcina mazei Go1] Length = 209 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 44/196 (22%), Positives = 77/196 (39%), Gaps = 27/196 (13%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 EI F+GRSNVGKSSL+ L K R PG T + + + D Sbjct: 15 EIIFAGRSNVGKSSLLKELFGAK--VRVGKRPGVT----------LRPTHAQVSDLLITD 62 Query: 91 MPGYGYARAPKKNV-DSWGGLIVRYLSERS-TLRCVYLLIDC-----------RHGVKQI 137 MPG+G+ K+ D V Y+ + + ++ L+ID I Sbjct: 63 MPGFGFMSGVKERKQDIVKDKTVHYIEDNAGRIKIAVLVIDGPAFPEIVDRWDSRDQIPI 122 Query: 138 DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLE--KTKYLIRNYPTAHPEVIPTSSVK 195 D ++F FL + + + K+DK+ + L + + +I S K Sbjct: 123 DVEMFDFLREIGIDTIVAANKMDKVKENESDPLLNEVAIRLGLEPPWQNWKHIIAPISAK 182 Query: 196 RKGIEVLRKAILETIN 211 + ++ L+ + + ++ Sbjct: 183 KGDLKTLKGLLRDRLH 198 >gi|300868767|ref|ZP_07113378.1| tRNA modification GTPase mnmE [Oscillatoria sp. PCC 6506] gi|300333328|emb|CBN58570.1| tRNA modification GTPase mnmE [Oscillatoria sp. PCC 6506] Length = 464 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 22/181 (12%) Query: 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVD 90 ++A GR NVGKSSL+N +R + A ++ PG T+ + S L + ++D Sbjct: 227 KVAIVGRPNVGKSSLLNAW-SRCDRAIVTDLPGTTRDVV------ESQLVVGGIPIQVLD 279 Query: 91 MPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 G R + V+ G R + V L ID G + D++++ + + Sbjct: 280 TAGI---RETEDRVEKIGVARSR--QAAESADLVLLAIDAAAGWTEGDREIYQQVKHR-- 332 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ K+D +S + K + A + +GIE L +AIL + Sbjct: 333 PVILIVNKVDLVSEKDLEILQSKIENPQAKVLAA--------AAYNQGIEDLEQAILTAV 384 Query: 211 N 211 N Sbjct: 385 N 385 >gi|313157956|gb|EFR57362.1| ribosome biogenesis GTPase Der [Alistipes sp. HGB5] Length = 434 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 14/184 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 P I GR NVGKSS+ N L+ + TS G T+ F Sbjct: 171 DEDLPHITIVGRPNVGKSSMTNALLGEERNIVTS-IAGTTRDSIHTRYNKFGM------D 223 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 LVD G ++++ + + R + L++D + G++ D ++ + + Sbjct: 224 FYLVDTAGMRKKGKAMEDLEFYSVM--RSIRAIENSDVCILMLDAQQGLESQDLNIHNLI 281 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNY--PTAHPEVIPTSSVKRKGI-EVL 202 + IV+ K D + T+++ ++ P +I TS + ++ I +VL Sbjct: 282 VRNRKGCVIVVNKWDLIEKD--NNTMKEWTEFLKKKLAPFNDIPIIFTSVLSKQRIFDVL 339 Query: 203 RKAI 206 + AI Sbjct: 340 QTAI 343 Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 22/180 (12%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L N LV ++ A G T+ + + N +++D Sbjct: 4 VAIVGRPNVGKSTLFNRLVGQRK-AIVDATAGTTRD------RHYGKTDWNGKEFSVIDT 56 Query: 92 PGYGYARAPKKNVDSWGGLIVRY-LSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV 150 GY + D + I R L + L++ G+ +DQ + L + + Sbjct: 57 GGY-----TVNSEDIFEDEIRRQVLLAIDEADVILFLVEVATGITDLDQLMADILRRTSK 111 Query: 151 SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V K+D ++ Y + SS+ G L AIL + Sbjct: 112 KVILVCNKVD---------NNDQIYSSHEFYALGLGDPFCISSMSGSGTGDLMDAILAAL 162 >gi|322420694|ref|YP_004199917.1| GTP-binding protein Era [Geobacter sp. M18] gi|320127081|gb|ADW14641.1| GTP-binding protein Era [Geobacter sp. M18] Length = 297 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 68/175 (38%), Gaps = 17/175 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ K L TS+ P T++ + + +D Sbjct: 11 VSIVGRPNVGKSTLLNRILGEK-LMITSDKPQTTRNQIKGI------HNVPGGQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A+ ++ LS + + L+D ++ + + L Sbjct: 64 PGIHRAK-----TRLNKFMVEEALSSVQGVDLILFLVDGAFDPEKEAEMIKEVLSGVDAP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAI 206 +VL KID + + YP E+IP S+ G++ L + + Sbjct: 119 VILVLNKIDLIPKGELLGRMAIYGE---TYP--FKEIIPVSASTGDGVDQLVQLV 168 >gi|297588533|ref|ZP_06947176.1| ribosome-associated GTPase EngA [Finegoldia magna ATCC 53516] gi|297573906|gb|EFH92627.1| ribosome-associated GTPase EngA [Finegoldia magna ATCC 53516] Length = 438 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 24/184 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N L+ +K +A T + PG T+ + + +V Sbjct: 4 PVVAIVGRANVGKSTLFNKLI-KKRIAITQDDPGVTRDRLY------MEAEWQNKYFTVV 56 Query: 90 DMPGYGYARAP--KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D G KN+ L T + ++D + G+ ID +V L + Sbjct: 57 DTGGLEPKSNEIITKNIKKQTEL------AIETADVILFMVDGKQGITPIDMEVADMLRR 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 S +V+ KID +++ + Y E+ P S+ G+ L +A++ Sbjct: 111 TKKSVILVVNKID---------HIKQQDNVYDFYNLGFYEIFPISASNSMGLGDLLEAVV 161 Query: 208 ETIN 211 + Sbjct: 162 SKFD 165 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ G+ NVGKSSLIN L+N + + ++ G T+ S + Sbjct: 173 DDDITKVCLIGKPNVGKSSLINNLLNEERM-IVTDIAGTTRDAI------DSKINYKGNE 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G R V+ + +VR LS L+ID GV + D + + Sbjct: 226 YIFIDTAGLRKRRKIDTEVERYS--VVRTLSAIDRSDICVLMIDATEGVSEQDTKILGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + + I++ K D + T T+ K IR + ++ S + K I+ L Sbjct: 284 HDQGKAMIILVNKWDLVEKQT--NTMNDFKKDIRTKLGFVMYVPIVFISVKENKRIDTLF 341 Query: 204 KAILE 208 I + Sbjct: 342 TEIEK 346 >gi|326794406|ref|YP_004312226.1| GTP-binding protein Era-like-protein [Marinomonas mediterranea MMB-1] gi|326545170|gb|ADZ90390.1| GTP-binding protein Era-like-protein [Marinomonas mediterranea MMB-1] Length = 339 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 16/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N ++ +K L+ TS P T+ V + VD Sbjct: 51 VAIVGRPNVGKSTLMNHILGQK-LSITSRKPQTTRDQILGVKTE------GSIQTIYVDT 103 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + + + + V +ID D+ V + Sbjct: 104 PGLHLG----QQKAINRFMNKTATAALKDVDVVLFVIDAER-WTDEDESVLQKVQYAQCP 158 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D L E L K L +++P S+++ K ++ L + I Sbjct: 159 VVLVVNKVDNLD--EKDELLPKLAALSEK--MEFAQIVPISALRNKNLDRLENLVESYI 213 >gi|302380361|ref|ZP_07268831.1| ribosome-associated GTPase EngA [Finegoldia magna ACS-171-V-Col3] gi|303233791|ref|ZP_07320445.1| ribosome-associated GTPase EngA [Finegoldia magna BVS033A4] gi|302311851|gb|EFK93862.1| ribosome-associated GTPase EngA [Finegoldia magna ACS-171-V-Col3] gi|302495225|gb|EFL54977.1| ribosome-associated GTPase EngA [Finegoldia magna BVS033A4] Length = 438 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 24/184 (13%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR+NVGKS+L N L+ +K +A T + PG T+ + + +V Sbjct: 4 PVVAIVGRANVGKSTLFNKLI-KKRIAITQDDPGVTRDRLY------MEAEWQNKYFTVV 56 Query: 90 DMPGYGYARAP--KKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDK 147 D G KN+ L T + ++D + G+ ID +V L + Sbjct: 57 DTGGLEPKSNEIITKNIKKQTEL------AIETADVILFMVDGKQGITPIDMEVADMLRR 110 Query: 148 KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 S +V+ KID +++ + Y E+ P S+ G+ L +A++ Sbjct: 111 TKKSVILVVNKID---------HIKQQDNVYDFYNLGFYEIFPISASNSMGLGDLLEAVV 161 Query: 208 ETIN 211 + Sbjct: 162 SKFD 165 Score = 107 bits (269), Expect = 8e-22, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 13/185 (7%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 ++ G+ NVGKSSLIN L+N + + ++ G T+ S + Sbjct: 173 DDDITKVCLIGKPNVGKSSLINNLLNEERM-IVTDIAGTTRDAI------DSKINYKGNE 225 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +D G + V+ + +VR LS L+ID GV + D + + Sbjct: 226 YVFIDTAGLRKRKKIDTEVERYS--VVRTLSAIDRSDICVLMIDATEGVSEQDTKILGYA 283 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + + I++ K D + T T+ K IR + ++ S + K I+ L Sbjct: 284 HDQGKAMIILVNKWDLVEKQT--NTMNDFKKDIRTKLGFVMYVPIVFISVKENKRIDTLF 341 Query: 204 KAILE 208 I + Sbjct: 342 TEIEK 346 >gi|227515173|ref|ZP_03945222.1| GTP-binding protein EngA [Lactobacillus fermentum ATCC 14931] gi|227086505|gb|EEI21817.1| GTP-binding protein EngA [Lactobacillus fermentum ATCC 14931] Length = 437 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 80/189 (42%), Gaps = 11/189 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +F GR NVGKSSL+N ++ + S+ G T+ + + Sbjct: 171 ENDRIRFSFIGRPNVGKSSLVNAILGENRV-IVSDMAGTTRDAI-----NTQFTAKDGRE 224 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 +VD G +N + + ++R + V ++++ G++++D+ + + Sbjct: 225 FTMVDTAGIKKKGKLYENTERYA--LMRSMRAIDDSDVVLVVLNAEEGIRELDKHIAGYA 282 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPT--AHPEVIPTSSVKRKGIEVLR 203 + + IV+ K D + Q T+ LIR+ ++ ++ S+ ++ + L Sbjct: 283 HEAGRAVIIVVNKWDTIPDRD-QRTMTDFTNLIRHEFQYLSYAPIVFVSAKTKQRLSRLP 341 Query: 204 KAILETINY 212 + I E ++ Sbjct: 342 EMIEEAYDH 350 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N + + +A + PG T+ + ++ +++ Sbjct: 4 PVVAIVGRPNVGKSTLFNRIAGER-IAIVEDTPGVTRDR-LYAHGEWLGKN-----FSMI 56 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G + P I + ++++ +GV D+ V L + Sbjct: 57 DTGGIEMSDQPLLTQIRQQAEI-----AIEEADVIIMVVNVENGVTDADEQVAQILYRSN 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 + + K+D + L+ + Y E P SSV G+ + A++E Sbjct: 112 KPVVLAVNKVD-----NPERRLDVYDF----YQLGLGEPYPVSSVHGVGLGDMLDAVIE 161 >gi|225028014|ref|ZP_03717206.1| hypothetical protein EUBHAL_02283 [Eubacterium hallii DSM 3353] gi|224954728|gb|EEG35937.1| hypothetical protein EUBHAL_02283 [Eubacterium hallii DSM 3353] Length = 445 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 13/186 (6%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P+IA G+ N GKSS+IN L+ + + S G T+ + +K N Sbjct: 180 DDRPKIAVIGKPNAGKSSIINKLLGEERV-IVSPVAGTTRDAI------DTTVKRNGQEY 232 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 +D G K+ ++ + I+R ++ L+ID G+ + D + Sbjct: 233 VFIDTAGLRRKSKIKEELERYS--IIRTVTAVERCDVAVLIIDATEGITEQDAKIAGIAH 290 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHP--EVIPTSSVKRKGIEVLRK 204 ++ I + K D + T++K IR + P E+I S+ + + L + Sbjct: 291 ERGKGMIIAVNKWDLVEKDNT--TMKKFTEKIREKLSYMPYAELIFLSAKTGQRLPKLFE 348 Query: 205 AILETI 210 I I Sbjct: 349 MIDAVI 354 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 19/180 (10%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P +A GR NVGKS+L N L ++ + PG T+ + L+ Sbjct: 8 PVVAVVGRPNVGKSTLFNALAG-SRISIVEDTPGVTRDRIYAEVSWLDY------QFTLI 60 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G P+ + + + + T + L+D R G+ D V L + Sbjct: 61 DTGGI----EPESDDIIISRMREQAETAIMTADVILFLVDVRQGLVDADFKVADMLRRSH 116 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILET 209 +V+ K+D + Y + IP S+ + GI + ++E Sbjct: 117 RPVVLVVNKVDNFDK--------FMPDVYEFYNLGLGDPIPVSAQGKLGIGDMLDQVVEK 168 >gi|292656060|ref|YP_003535957.1| GTP-binding protein [Haloferax volcanii DS2] gi|291370408|gb|ADE02635.1| GTP-binding protein [Haloferax volcanii DS2] Length = 205 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 26/201 (12%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + EI GRSNVGKS+L+ L T PG T+ N F N Sbjct: 5 RPDRDEIVLVGRSNVGKSTLMRELTGHSK-FTTGKKPGVTRKPNHF--------DWNAEK 55 Query: 86 MALVDMPGYGYAR-APKKNVDSWGGLIVRYLSERST--LRCVYL-----LIDC--RHGVK 135 D+PG+G+ + ++ +V+Y+ E + L V + +ID RH + Sbjct: 56 FMFTDLPGFGFMSGVDRDTREAIKTDVVQYIEEHADDILAAVLVVDGKSVIDIIDRHTTE 115 Query: 136 ---QIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP--TAHPEVIP 190 D ++F FLD+ + + + K+DK+ E L + +P VI Sbjct: 116 DSIPHDVEMFFFLDELDIPTVVAVNKMDKVD--DRDERLNDLCDRLGLFPPWKQWRNVIA 173 Query: 191 TSSVKRKGIEVLRKAILETIN 211 + KR I L A+ ++ Sbjct: 174 PITAKRGDISHLEDALRSHLH 194 >gi|94502128|ref|ZP_01308629.1| GTP-binding protein Era [Oceanobacter sp. RED65] gi|94425730|gb|EAT10737.1| GTP-binding protein Era [Oceanobacter sp. RED65] Length = 299 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 15/179 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 IA GR NVGKS+L+N ++ +K L+ TS P T+H + + VD Sbjct: 9 IAIVGRPNVGKSTLLNNILGQK-LSITSRKPQTTRHQILGMKTTAN------VQAIYVDT 61 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG + K + ++ + V LID R DQ V + V Sbjct: 62 PGLHEGYSEKALNRYINKVATTAIN---DVDLVVFLID-RTKWMPEDQSVLEKIQASKVP 117 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D L Q L + + + + EV P S+ + L AI + Sbjct: 118 CILVINKLDHL--ADKQSLLPYLEEVSQRHD--FKEVFPISAKTGYNVAELEAAIARQL 172 >gi|300812180|ref|ZP_07092622.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123894|ref|YP_004034153.1| GTP-binding protein era-like protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300496816|gb|EFK31896.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312280457|gb|ADQ61176.1| GTP-binding protein era-like protein [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325686031|gb|EGD28089.1| GTP-binding protein Era [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 301 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 79/179 (44%), Gaps = 18/179 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N L+ +K +A TS P T++ + + + + VD Sbjct: 12 VALVGRPNVGKSTLMNRLIGQK-VAITSAKPQTTRNKISGIYTE------DDMQVVFVDT 64 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG ++D + LS + V ++D + + ++ V L + Sbjct: 65 PGI---FKSHSDLDEYMD--KASLSSLKDVDLVMFMVDAK-EAGKGEEYVAGLLKDLDIP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID++ P ++ + + + E +P S+ + G++ L K + + + Sbjct: 119 VFLVINKIDQVHPNDLLPIIDSYQAVGK-----FAEFLPISARQGNGVDDLLKTLKDYL 172 >gi|294793788|ref|ZP_06758925.1| GTP-binding protein Era [Veillonella sp. 3_1_44] gi|294455358|gb|EFG23730.1| GTP-binding protein Era [Veillonella sp. 3_1_44] Length = 307 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+LIN L+ K +A S+ T++ V D S + +D Sbjct: 20 VAVVGRPNVGKSTLINALIGDK-IAIVSDKAQTTRNRIICVYTDESK------QIVFMDT 72 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + + ++ + V ++ D + L + V Sbjct: 73 PGV---HKPKHKLGEF--MVDAAIESLKETEAVLFVVAGNEKRGPGDNFIIEQLKRVKVP 127 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ KID L +E LE + YP A VIP S+ ++ + + K + ET+ Sbjct: 128 VFLVVNKIDTLKK---EELLEAIVFYQDAYPFAG--VIPISAKDKENLSEILKVLEETL 181 >gi|159899753|ref|YP_001546000.1| GTP-binding protein Era [Herpetosiphon aurantiacus ATCC 23779] gi|159892792|gb|ABX05872.1| GTP-binding protein Era [Herpetosiphon aurantiacus ATCC 23779] Length = 489 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 31/198 (15%) Query: 23 LLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 LPK P +A G+ NVGKS+L+N + +K ++ S P T+ Sbjct: 183 NLPKPLLPTDQEVHSGFVALVGKPNVGKSTLLNAYLGQK-VSIVSPKPQTTR------VP 235 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSER--STLRCVYLLIDCRH 132 L + VD PG G +V +++R + ++D Sbjct: 236 VRGILNGPDAQIIFVDTPGIHKP------RHKLGNFMVD-VAKRAVPNADVICFMVDITV 288 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 ++D+++ + + +VL K+D + A + L++ + L P + S Sbjct: 289 PPNRMDREIAQMVLLSRKPHILVLNKVD--ATDEADKHLQEYRDLA---PWEME--VAVS 341 Query: 193 SVKRKGIEVLRKAILETI 210 + + G+E L I++ + Sbjct: 342 ARDKLGMETLLAEIVQRL 359 >gi|114332120|ref|YP_748342.1| tRNA modification GTPase TrmE [Nitrosomonas eutropha C91] gi|114309134|gb|ABI60377.1| tRNA modification GTPase trmE [Nitrosomonas eutropha C91] Length = 459 Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 26/198 (13%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + G L + G ++ +G+ NVGKSSL+N L + +A + PG T+ Sbjct: 210 VLSASRRGNLLQEGI-KVVLTGQPNVGKSSLLNRLAGDE-IAIVTEIPGTTRDTI----- 262 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 +++ + L+D G R V+ G I R + V LL+D R+GV Sbjct: 263 -RQSIEIEGIPLHLIDTAG---LRETSDIVEQHG--IARAYAAIEQADLVLLLVDGRYGV 316 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D V + L K + V KID L + + I S Sbjct: 317 TKEDHSVLARL-PKELPVLTVHNKID------LSGQLSRIEE------DTSGTAIYLSVK 363 Query: 195 KRKGIEVLRKAILETINY 212 +GIE+LR +L+T+ + Sbjct: 364 SGEGIELLRTVLLKTVGW 381 >gi|256825020|ref|YP_003148980.1| GTP-binding protein Era [Kytococcus sedentarius DSM 20547] gi|256688413|gb|ACV06215.1| GTP-binding protein Era [Kytococcus sedentarius DSM 20547] Length = 310 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 21/183 (11%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + F GR N GKS+L N LV +K +A TSN P T+H + D + +VD Sbjct: 16 VCFVGRPNAGKSTLTNALVGQK-IAITSNKPQTTRHTVRGIIGD------EASQIVVVDT 68 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAV- 150 PG R ++ L + + + D+ + + L++ Sbjct: 69 PGLHKPRTLLGQR--LNDVVRETLL---DVDVIGFCMPADQKPGPGDKYIAAELEELRRG 123 Query: 151 ---SYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + TK D +S E L L E++P S+V + ++V+R+ I Sbjct: 124 RRTPIIAIATKADLVSRDQLAEHLMAIDQL-----GDFDEIVPCSAVNGEQLDVVRRLIT 178 Query: 208 ETI 210 E + Sbjct: 179 EKL 181 >gi|313884139|ref|ZP_07817905.1| ribosome biogenesis GTPase Era [Eremococcus coleocola ACS-139-V-Col8] gi|312620586|gb|EFR32009.1| ribosome biogenesis GTPase Era [Eremococcus coleocola ACS-139-V-Col8] Length = 301 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A GR NVGKS+L+N +V +K +A S+ T++ V D + + +D Sbjct: 11 VALIGRPNVGKSTLLNKVVGQK-IAIMSDKAQTTRNRIQGVYTDADS------QVVFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG PK + ++ ++ S V ++++ + D+ V V Sbjct: 64 PGI---HKPKHALGNF--MLKTAYSALQGADAVCVVVNAAEKIGPGDRLVIERAKNVQVP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +++ KID +SP + +E K L +V P S+++ + L + + E + Sbjct: 119 LFLLINKIDLVSPEQVLQAIESYKDL-----ADFAQVFPISALEGNNVPELVEGLKEVL 172 >gi|238924233|ref|YP_002937749.1| GTP-binding protein Era [Eubacterium rectale ATCC 33656] gi|238875908|gb|ACR75615.1| GTP-binding protein Era [Eubacterium rectale ATCC 33656] Length = 303 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 78/181 (43%), Gaps = 16/181 (8%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 + GR NVGKS+L+N L+ +K +A TSN P T++ V D + +D Sbjct: 10 VTIIGRPNVGKSTLMNRLIGQK-IAITSNKPQTTRNRIQTVYTDM-----EKGQIVFLDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG A+ ++ + + V L++ + + +Q + L K Sbjct: 64 PGIHKAKN-----KLGEYMVNVAEKTLNEVDVVLWLVEPTNFIGAGEQHIIEQLKKVNTP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETIN 211 +++ K+D + E ++ + + E+IPTS+++ + + + +I + + Sbjct: 119 VILIINKVDTVEKEKVLEYIDTYRKVF-----DFAEIIPTSALRGQNTDDVINSIFKYLP 173 Query: 212 Y 212 Y Sbjct: 174 Y 174 >gi|224097032|ref|XP_002310817.1| predicted protein [Populus trichocarpa] gi|222853720|gb|EEE91267.1| predicted protein [Populus trichocarpa] Length = 414 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 20/182 (10%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 +A G+ NVGKS+L N ++ +K L+ ++ P T+H + M L D Sbjct: 119 VAVVGKPNVGKSTLSNQMIGQK-LSIVTDKPQTTRHRILGI------CSAPDYQMILYDT 171 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERS-TLRCVYLLIDCRHGVKQIDQDVFSFLDKK-- 148 PG +K + ++++ + + CV +++D ++ID+ + + Sbjct: 172 PG-----VIEKKMHKLDSMMMKNVRSAAINADCVLVIVDACRAPEKIDEMLEEGVGNLKD 226 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208 V +VL K D + P + LE + T EVIP S+ +G+E +++ IL Sbjct: 227 NVPTLLVLNKKDLIKPGEIAKKLEWYEK-----FTGVDEVIPVSAKFGQGVEDIKEWILS 281 Query: 209 TI 210 + Sbjct: 282 KL 283 >gi|205422392|sp|Q0AE55|MNME_NITEC RecName: Full=tRNA modification GTPase mnmE Length = 451 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 26/198 (13%) Query: 15 LRGVPEIGLLPKAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPK 74 + G L + G ++ +G+ NVGKSSL+N L + +A + PG T+ Sbjct: 202 VLSASRRGNLLQEGI-KVVLTGQPNVGKSSLLNRLAGDE-IAIVTEIPGTTRDTI----- 254 Query: 75 DFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGV 134 +++ + L+D G R V+ G I R + V LL+D R+GV Sbjct: 255 -RQSIEIEGIPLHLIDTAG---LRETSDIVEQHG--IARAYAAIEQADLVLLLVDGRYGV 308 Query: 135 KQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSV 194 + D V + L K + V KID L + + I S Sbjct: 309 TKEDHSVLARL-PKELPVLTVHNKID------LSGQLSRIEE------DTSGTAIYLSVK 355 Query: 195 KRKGIEVLRKAILETINY 212 +GIE+LR +L+T+ + Sbjct: 356 SGEGIELLRTVLLKTVGW 373 >gi|197104999|ref|YP_002130376.1| GTP-binding protein [Phenylobacterium zucineum HLK1] gi|196478419|gb|ACG77947.1| GTP-binding protein [Phenylobacterium zucineum HLK1] Length = 509 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 20/179 (11%) Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88 P ++A GR NVGKS+L N L RK LA + PG T+ F + + L Sbjct: 2 PLKLAIVGRPNVGKSTLFNRLAGRK-LAIVDDRPGVTRDRRFGTGR------LGDLDLEL 54 Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148 +D G + +++++ + + +ID R GV D+ L K+ Sbjct: 55 IDTAG--FEDVTDESLEA--RMRAQTERAVDECDVALFVIDSREGVTPADRIFAEILRKR 110 Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 + K E + ++ + E +P S+ +G+ L A+ Sbjct: 111 DKPVILAANKA---------EGRQGEAGILDAWGLGLGEPVPISAEHGEGMADLYAALA 160 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 13/184 (7%) Query: 27 AGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAM 86 P IA GR N GKS+L+N L+ L T G T+ +P D+ + + Sbjct: 177 DKPVRIAIVGRPNAGKSTLVNRLIGEDRL-LTGPEAGITRD---AIPVDW---EWEGRPI 229 Query: 87 ALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLD 146 LVD G ++ ++ + + V L++D H + D + + Sbjct: 230 RLVDTAGLRRKAKVQEKLEKLS--TQDTIRAITFAEVVLLVMDATHPFEIQDLQIADLCE 287 Query: 147 KKAVSYQIVLTKIDKLSPTTAQETL-EKTKYLIRNYPTAHP-EVIPTSSVKRKGIEVLRK 204 ++ VLTK D + Q L E T+ R P ++ S+ +G++ L Sbjct: 288 REGRGLVFVLTKWDLV--EEPQAVLAEITEEAYRLLPQVKGSPIVALSAETGRGMDRLMP 345 Query: 205 AILE 208 A+L+ Sbjct: 346 AVLK 349 >gi|78223518|ref|YP_385265.1| GTP-binding protein Era [Geobacter metallireducens GS-15] gi|123571481|sp|Q39T84|ERA_GEOMG RecName: Full=GTPase Era gi|78194773|gb|ABB32540.1| GTP-binding protein Era [Geobacter metallireducens GS-15] Length = 298 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 17/179 (9%) Query: 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDM 91 ++ GR NVGKS+L+N ++ K + TS+ P T++ + + +D Sbjct: 11 VSIIGRPNVGKSTLLNRILGEK-IVITSDKPQTTRNRIQGI------HNVPGAQIVFIDT 63 Query: 92 PGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVS 151 PG AR+ ++ LS + V L++ + +Q++ L Sbjct: 64 PGIHQARS-----RLNKYMVEVALSAIREVDLVLFLVEANQKPGEQEQEIIDVLAGATAP 118 Query: 152 YQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 +V+ K+D E + K YP E++P S+ G++ L + + + + Sbjct: 119 VFLVINKVDLTEKGAVLERIAAYKD---RYP--FREIVPISAGTGDGVDHLVELVRKAL 172 >gi|56476106|ref|YP_157695.1| GTP-binding protein EngA [Aromatoleum aromaticum EbN1] gi|81821192|sp|Q5P7B7|DER_AZOSE RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|56312149|emb|CAI06794.1| GTP-binding protein engA [Aromatoleum aromaticum EbN1] Length = 442 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 69/178 (38%), Gaps = 20/178 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P I GR NVGKS+L N L ++ A ++ PG T+ ++ + + +V Sbjct: 3 PTIVLVGRPNVGKSTLFNRLTKTRD-ALVADQPGLTRDRHYGIGR------VGDRDYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + + + ++D R G+ D+ + + L + Sbjct: 56 DTAGFDPVAKDG----IMHEMARQAEQAIAEADALLFMVDGRSGLTPHDEQIAARLRRAG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAIL 207 +V+ K E +E+T + + +P S+ +G++ L +L Sbjct: 112 RPVYLVVNKS---------EGMERTMVAAEFHALGLGDPLPVSASHGEGVKQLLDLVL 160 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 72/194 (37%), Gaps = 19/194 (9%) Query: 21 IGLLPKAGPPE--------IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFV 72 +G P PE IA GR NVGKS+ +N L+ + + + PG T+ Sbjct: 160 LGAFPPDVEPEEDEGRTPRIAIVGRPNVGKSTFVNSLLGEERV-IAFDMPGTTRDAIAI- 217 Query: 73 PKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRH 132 + + L+D G + V+ + +++ L V L++D Sbjct: 218 -----PFERDGRHYTLIDTAGLRRRGKVFEAVEKFS--VIKTLQAIEQANVVVLVLDASQ 270 Query: 133 GVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTS 192 + D + F+ + + + + K D + + L K + + S Sbjct: 271 DISDQDAHIAGFILEAGRALVVAVNKWDDVDDYRRE--LIKQDLTRKLNFLSFARFHYIS 328 Query: 193 SVKRKGIEVLRKAI 206 ++K G+ + K++ Sbjct: 329 ALKGAGVAAVMKSV 342 >gi|206560243|ref|YP_002231007.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315] gi|238693091|sp|B4EAW5|DER_BURCJ RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA gi|198036284|emb|CAR52180.1| GTP-binding protein EngA [Burkholderia cenocepacia J2315] Length = 445 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 73/184 (39%), Gaps = 11/184 (5%) Query: 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPA 85 + +IA GR NVGKS+L+N L+ + + PG T+ + + + N Sbjct: 176 PSRGIKIAIVGRPNVGKSTLVNALIGEDRV-IAFDMPGTTRDSIY------VDFERNGKK 228 Query: 86 MALVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFL 145 L+D G + ++ + +V+ L S V LL+D + + D + F+ Sbjct: 229 YTLIDTAGLRRRGKVFEAIEKFS--VVKTLQSISDANVVILLLDAQQDISDQDAHIAGFV 286 Query: 146 DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKA 205 ++ + I + K D ++ A I S+ K+ GI L ++ Sbjct: 287 VEQGRALVIGVNKWDGFDDHARDRAKADLTRKLKFLDFAKSHFI--SAAKKTGIGALMRS 344 Query: 206 ILET 209 + + Sbjct: 345 VDDA 348 Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 20/170 (11%) Query: 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALV 89 P IA GR NVGKS+L N L ++ A ++ PG T+ + + + +V Sbjct: 3 PVIALVGRPNVGKSTLFNRLTRSRD-ALVADLPGLTRD------RHYGEGRVGERPYLVV 55 Query: 90 DMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKA 149 D G+ + + V ++D R+G+ D+ + +L K Sbjct: 56 DTGGFEPVAKDG----ILHEMARQTRQAVEEADVVVFIVDGRNGLAPQDKSIADYLRKTG 111 Query: 150 VSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGI 199 +V+ K