RPSBLAST alignment for GI: 254780484 and conserved domain: TIGR00450
>gnl|CDD|161885 TIGR00450, mnmE_trmE_thdF, tRNA modification GTPase TrmE. TrmE, also called MnmE and previously designated ThdF (thiophene and furan oxidation protein), is a GTPase involved in tRNA modification to create 5-methylaminomethyl-2-thiouridine in the wobble position of some tRNAs. This protein and GidA form an alpha2/beta2 heterotetramer. Length = 442
Score = 43.2 bits (102), Expect = 4e-05
Identities = 45/183 (24%), Positives = 71/183 (38%), Gaps = 25/183 (13%)
Query: 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMAL 88
++A G NVGKSSL+N L+ +++ A S+ G T+ V DF L L + L
Sbjct: 203 GFKLAIVGSPNVGKSSLLNALL-KQDRAIVSDIKGTTRD---VVEGDF-ELNGIL--IKL 255
Query: 89 VDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKK 148
+D G R V+ G I + V ++D + + D + L+K
Sbjct: 256 LDTAGI---REHADFVERLG--IEKSFKAIKQADLVIYVLDASQPLTK-DDFLIIDLNKS 309
Query: 149 AVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIEVLRKAILE 208
+ +VL KID L + N S K+ I+ L + +
Sbjct: 310 KKPFILVLNKID-LKI---NSLEFFVSSKVLNSSNL--------SAKQLKIKALVDLLTQ 357
Query: 209 TIN 211
IN
Sbjct: 358 KIN 360