HHsearch alignment for GI: 254780485 and conserved domain: COG0119

>COG0119 LeuA Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism].
Probab=94.28  E-value=0.46  Score=26.81  Aligned_cols=220  Identities=17%  Similarity=0.174  Sum_probs=120.7

Q ss_pred             CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEC---CCCCHHHHHHHHCCCCCEE
Q ss_conf             0068579999999999649838997303688874428999998876213688324102---5699999998741576069
Q gi|254780485|r   86 KLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVKSLGLETCMTL---GMLSFEQAQILSKAGLDYY  162 (328)
Q Consensus        86 ~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~~~~~~i~~~~---g~~~~~~~~~Lk~aG~~~~  162 (328)
T Consensus        19 ~~~s~e~Ki~Ia~~Ld~lGv~~IE~g--~p~~s~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~ea~~~a~~~~i   93 (409)
T COG0119          19 VSFSVEEKIRIAKALDDLGVDYIEAG--FPVASPGDFEFVRAIAE---KAGLFICALIAALARAIKRDIEALLEAGVDRI   93 (409)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEE--CCCCCHHHHHHHHHHHH---HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             95788999999999997699879972--78688546999999987---46863220223317867755999975799989


Q ss_pred             EEECCCCHHHHHCCCCCCCHHH----HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCEEE
Q ss_conf             7513437777320588889899----999999999879855770786689899999999999974088886020541120
Q gi|254780485|r  163 NHNIDTSERFYPHVTTTHTFED----RLQTLENVRKSGIKVCCGGILGLGEMIDDRIDMLLTLANLSTPPESIPINLLIP  238 (328)
Q Consensus       163 ~~~let~~~~~~~~~~~~~~~~----~l~~~~~a~~~G~~~~sg~l~G~gEt~eeri~~l~~lr~l~~~~~~v~~~~~~p  238 (328)
T Consensus        94 ~if~~tSd~h~~~~~~-~t~~e~l~~~~~~v~~a~~~g~~~~~~~Ed~~rt~~e~l~~~~~~~~~~ga~--------~i~  164 (409)
T COG0119          94 HIFIATSDLHLRYKLK-KTREEVLERAVDAVEYARDHGLEVRFSAEDATRTDPEFLAEVVKAAIEAGAD--------RIN  164 (409)
T ss_pred             EEEECCCHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCC--------EEE
T ss_conf             9997478899998848-9999999999999999997397589875313367999999999999971994--------999


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCEEEEHHHHHCH--HHHHHHHHHCCC---EEEECCEEECCCCCCHHH
Q ss_conf             487412445687989999999999996868-72142311565165--689999980998---899778665158889899
Q gi|254780485|r  239 IPGSKFEENKKVDPIEHVRIISVARILMPK-SRLRLAAGRAMMSD--ELQALCFFSGAN---SIFVGDTLLTAKNPSYNK  312 (328)
Q Consensus       239 ~~gt~l~~~~~~~~~e~lr~iAi~RL~lP~-~~i~i~~~~~~~~~--~~~~~~L~~GaN---~~~~g~~~~t~~g~~~~~  312 (328)
T Consensus       165 l~DT----vG~~~P~~~~~~i~~l~~~v~~~~~i~~H~-HND~G~AvANslaAv~aGa~~v~~TvnGiG-ERaGna~l~~  238 (409)
T COG0119         165 LPDT----VGVATPNEVADIIEALKANVPNKVILSVHC-HNDLGMAVANSLAAVEAGADQVEGTVNGIG-ERAGNAALEE  238 (409)
T ss_pred             ECCC----CCCCCHHHHHHHHHHHHHHCCCCCEEEEEE-CCCCCHHHHHHHHHHHCCCCEEEEECCCCE-ECCCCCCHHH
T ss_conf             7787----686587999999999998378887388983-698565999999999848838999645614-3366654799


Q ss_pred             HHH---HHHHCCCCCC
Q ss_conf             999---9998298532
Q gi|254780485|r  313 DTI---LFNRLGLIPD  325 (328)
Q Consensus       313 ~~~---~i~~~G~~P~  325 (328)
T Consensus       239 v~~~l~~~~~~~~~~~  254 (409)
T COG0119         239 VVLALALRKDYGVDTG  254 (409)
T ss_pred             HHHHHHHHHHCCCCCC
T ss_conf             9999999765187568