HHsearch alignment for GI: 254780485 and conserved domain: COG0535
>COG0535 Predicted Fe-S oxidoreductases [General function prediction only].
Probab=99.00 E-value=1.9e-07 Score=69.51 Aligned_cols=173 Identities=18% Similarity=0.288 Sum_probs=110.2
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CEEEEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf 998645307868342321243354777564100068579999999999649-8389973036888744289999988762
Q gi|254780485|r 54 LSKLLNIKTGGCPENCGYCNQSVHNKSKLKASKLINVDQVLKEAKNAKENG-ATRYCMGAAWREPKERDLSIIVDMIKGV 132 (328)
Q Consensus 54 ~~~~in~~TN~C~~~C~fCaf~~~~~~~~~~~~~~~~Eei~~~a~~~~~~G-~~~~~l~~~~~~~~~~~~~~~~e~i~~i 132 (328)
T Consensus 19 ~~~~~~~-t~~Cnl~C~~C~~~~~~~----~~~el~~~~~~~~~~~~~~~g~~~~v-~~~gGEPll~---~~~~ei~~~~ 89 (347)
T COG0535 19 LVVGIEL-TNRCNLACKHCYAEAGKK----LPGELSTEEDLRVIDELAELGEIPVV-IFTGGEPLLR---PDLLEIVEYA 89 (347)
T ss_pred CEEEEEC-CCCCCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHCCCEEEE-EECCCCCEEC---CCHHHHHHHH
T ss_conf 3799855-887687499877242677----67735687878999999871884499-8079873334---5799999998
Q ss_pred CCC-CCCEEEEC-C-CCCHHHHHHHHCCCCCEEEEECCC-CHHHHHCCCC-CCCHHHHHHHHHHHHHCCCCCC-CEEEEC
Q ss_conf 136-88324102-5-699999998741576069751343-7777320588-8898999999999998798557-707866
Q gi|254780485|r 133 KSL-GLETCMTL-G-MLSFEQAQILSKAGLDYYNHNIDT-SERFYPHVTT-THTFEDRLQTLENVRKSGIKVC-CGGILG 206 (328)
Q Consensus 133 ~~~-~~~i~~~~-g-~~~~~~~~~Lk~aG~~~~~~~let-~~~~~~~~~~-~~~~~~~l~~~~~a~~~G~~~~-sg~l~G 206 (328)
T Consensus 90 ~~~~~~~~~~~TnG~~~~~~~~~~l~~~g~~~v~iSld~~~~e~hd~~rg~~g~~~~~~~~i~~~~~~g~~~~~~~~v~~ 169 (347)
T COG0535 90 RKKGGIRVSLSTNGTLLTEEVLEKLKEAGLDYVSISLDGLDPETHDPIRGVKGVFKRAVEAIKNLKEAGILVVINTTVTK 169 (347)
T ss_pred HHCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEC
T ss_conf 51387289882687545388999887668876999974588532140027762699999999999873970489999956
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCEEECCCEEEC
Q ss_conf 898999999999999740888860205411204
Q gi|254780485|r 207 LGEMIDDRIDMLLTLANLSTPPESIPINLLIPI 239 (328)
Q Consensus 207 ~gEt~eeri~~l~~lr~l~~~~~~v~~~~~~p~ 239 (328)
T Consensus 170 --~n~~~l~~~~~~~~~~g~~--~~~~~~~~~~ 198 (347)
T COG0535 170 --INYDELPEIADLAAELGVD--ELNVFPLIPV 198 (347)
T ss_pred --CCHHHHHHHHHHHHHCCCC--CEEEEEEEEC
T ss_conf --6346589999999865976--0576764431