HHsearch alignment for GI: 254780485 and conserved domain: COG1060
>COG1060 ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only].
Probab=100.00 E-value=0 Score=419.07 Aligned_cols=321 Identities=19% Similarity=0.200 Sum_probs=267.4
Q ss_pred CHHHHHHHHHHCCCCCCCCHHHHHHHHCCC-HHHHHHHHHHHHHHHCCCCEEEEEEEEEEC-CCCCCCCCCCCCCCCCCC
Q ss_conf 855732134200234478999999997399-189999999998886289856999864530-786834232124335477
Q gi|254780485|r 2 SRSTVVPEENPTKKPKVWTSKEVFQIYNMP-FNDLLFWSHTVHRKNFEPNHIQLSKLLNIK-TGGCPENCGYCNQSVHNK 79 (328)
Q Consensus 2 ~~~~~~~~~~~~~~~e~ls~eea~~L~~~~-~~el~~~Aa~~~r~~~~g~~V~~~~~in~~-TN~C~~~C~fCaf~~~~~ 79 (328)
T Consensus 5 ~~~-~~~~~e~a~~~~~l~~~d~~~Ll~~~~~~~l~~~A~~~r~~~~~~~~vtyv~n~~in~TN~C~~~C~fCaF~~~~~ 83 (370)
T COG1060 5 ARD-VDEIVEKALNGERLTREDALALLSPADLEELEELADKARRRKRVGDGVTYVVNRNINYTNICVNDCTFCAFYRKPG 83 (370)
T ss_pred HHH-HHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCC
T ss_conf 667-8999998752577898999988545868999999999887423688579997525785323317997262345788
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEC-------------CCC
Q ss_conf 7564100068579999999999649838997303688874428999998876213688324102-------------569
Q gi|254780485|r 80 SKLKASKLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVKSLGLETCMTL-------------GML 146 (328)
Q Consensus 80 ~~~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~~~~~~i~~~~-------------g~~ 146 (328)
T Consensus 84 ~--~~~y~Ls~eeI~~~~~~~~~~G~~Evli~gG~~p--~~~~~y~~~~~~~ik~~~p~~~i~a~s~~ei~~~~~~~~~s 159 (370)
T COG1060 84 D--PKAYTLSPEEILEEVREAVKRGITEVLIVGGEHP--ELSLEYYEELFRTIKEEFPDLHIHALSAGEILFLAREGGLS 159 (370)
T ss_pred C--CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC--CCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCCC
T ss_conf 8--6553169999999999998759869998057687--74367999999999885730343016788867987436888
Q ss_pred CHHHHHHHHCCCCCEEEEECCC-C-HHHHHC-CCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 9999998741576069751343-7-777320-588889899999999999879855770786689899999999999974
Q gi|254780485|r 147 SFEQAQILSKAGLDYYNHNIDT-S-ERFYPH-VTTTHTFEDRLQTLENVRKSGIKVCCGGILGLGEMIDDRIDMLLTLAN 223 (328)
Q Consensus 147 ~~~~~~~Lk~aG~~~~~~~let-~-~~~~~~-~~~~~~~~~~l~~~~~a~~~G~~~~sg~l~G~gEt~eeri~~l~~lr~ 223 (328)
T Consensus 160 ~~E~l~~Lk~aGldsmpg~~aeil~e~vr~~~~p~K~~~~~wle~~~~Ah~lGI~~tatml~Gh~E~~ed~~~hl~~ir~ 239 (370)
T COG1060 160 YEEVLKRLKEAGLDSMPGGGAEILSEEVRKIHCPPKKSPEEWLEIHERAHRLGIPTTATMLLGHVETREDRIDHLEHIRD 239 (370)
T ss_pred HHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH
T ss_conf 99999999976987674754114167799863798899999999999999769984203478732888999999999999
Q ss_pred CCCCCCE---EECCCEEECCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHHHHHHHCCC---EE
Q ss_conf 0888860---205411204874-1244568798999999999999686872142311565165689999980998---89
Q gi|254780485|r 224 LSTPPES---IPINLLIPIPGS-KFEENKKVDPIEHVRIISVARILMPKSRLRLAAGRAMMSDELQALCFFSGAN---SI 296 (328)
Q Consensus 224 l~~~~~~---v~~~~~~p~~gt-~l~~~~~~~~~e~lr~iAi~RL~lP~~~i~i~~~~~~~~~~~~~~~L~~GaN---~~ 296 (328)
T Consensus 240 lQ~~~gg~~~fI~~~f~p~~~~~~~~~~~~~~~~~~l~~iAiaRi~l~~~i~~~~a~w~~~g~~~~~~~l~~GanD~ggt 319 (370)
T COG1060 240 LQDETGGFQEFIPLRFRPENGPLPAEVVPEASLEQDLKAIALARIFLDNNISNIQASWLRDGVILAQAALLSGANDLGGT 319 (370)
T ss_pred HHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 99985895799805545788876666789899899999999999970676542417441036699999998286167677
Q ss_pred EECCEEECCCC------CCHHHHHHHHHHCCCCCCCC
Q ss_conf 97786651588------89899999999829853247
Q gi|254780485|r 297 FVGDTLLTAKN------PSYNKDTILFNRLGLIPDLS 327 (328)
Q Consensus 297 ~~g~~~~t~~g------~~~~~~~~~i~~~G~~P~~~ 327 (328)
T Consensus 320 ~~~E~v~~~a~~~~~~~~~~eel~~~i~~aG~~p~~R 356 (370)
T COG1060 320 GYEEKVNPAAGAFSGDWRSVEELAALIKEAGRIPVER 356 (370)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 7553436555555678999999999999849970221