HHsearch alignment for GI: 254780485 and conserved domain: COG1180
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones].
Probab=98.77 E-value=1.8e-06 Score=63.11 Aligned_cols=194 Identities=19% Similarity=0.286 Sum_probs=125.2
Q ss_pred CCCCCCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEE
Q ss_conf 7868342321243354777-564100068579999999999649838997303688874428999998876213688324
Q gi|254780485|r 62 TGGCPENCGYCNQSVHNKS-KLKASKLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVKSLGLETC 140 (328)
Q Consensus 62 TN~C~~~C~fCaf~~~~~~-~~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~~~~~~i~ 140 (328)
T Consensus 42 ~~GCnlrC~~C~N~~~~~~~~~~~~~~~~~e~l~~~~~~--~~~~~gvt~-SGGE-P~-~q~e~~~~~~~~ake~Gl~~~ 116 (260)
T COG1180 42 LQGCNLRCPYCQNPEISQRGREVSGEEVSPEVLVDKAFY--SESGGGVTF-SGGE-PT-LQAEFALDLLRAAKERGLHVA 116 (260)
T ss_pred ECCCCCCCCCCCCHHHHHCCCCCCHHHCCHHHHHHHHHH--CCCCCEEEE-ECCH-HH-HHHHHHHHHHHHHHHCCCEEE
T ss_conf 789899899897946760656565645789899998743--169988999-8960-44-439999999999998799089
Q ss_pred E-ECCCCCHHHHHHHHCCCCCEEEEECCC-CHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE--CCCCCHHHHHH
Q ss_conf 1-025699999998741576069751343-7777320588889899999999999879855770786--68989999999
Q gi|254780485|r 141 M-TLGMLSFEQAQILSKAGLDYYNHNIDT-SERFYPHVTTTHTFEDRLQTLENVRKSGIKVCCGGIL--GLGEMIDDRID 216 (328)
Q Consensus 141 ~-~~g~~~~~~~~~Lk~aG~~~~~~~let-~~~~~~~~~~~~~~~~~l~~~~~a~~~G~~~~sg~l~--G~gEt~eeri~ 216 (328)
T Consensus 117 l~TnG~~~~~~~~~l~~~-~D~v~~DlK~~~~~~yr~~t-g~~~~~vl~~~~~l~~~g~~ve~r~lviPg~~d~~e~i~~ 194 (260)
T COG1180 117 LDTNGFLPPEALEELLPL-LDAVLLDLKAFDDELYRKLT-GADNEPVLENLELLADLGVHVEIRTLVIPGYNDDEEEIRE 194 (260)
T ss_pred EECCCCCCHHHHHHHHHH-CCCEEEECCCCCHHHHHHHH-CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHH
T ss_conf 976899882689999974-23148840668878889875-6871688999999861798399988733898899999999
Q ss_pred HHHHHHHCCCCCCEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999974088886020541120487412445687989999999999996
Q gi|254780485|r 217 MLLTLANLSTPPESIPINLLIPIPGSKFEENKKVDPIEHVRIISVARIL 265 (328)
Q Consensus 217 ~l~~lr~l~~~~~~v~~~~~~p~~gt~l~~~~~~~~~e~lr~iAi~RL~ 265 (328)
T Consensus 195 i~~~i~~~~~---~~p~~~l~fhp~~~~~~~p~~~~~~le~~~~~a~~~ 240 (260)
T COG1180 195 LAEFIADLGP---EIPIHLLRFHPDYKLKDLPPTPVETLEEAKKLAKEE 240 (260)
T ss_pred HHHHHHHCCC---CCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999973086---665587566874011357999288899888778999