HHsearch alignment for GI: 254780485 and conserved domain: COG4018

>COG4018 Uncharacterized protein conserved in archaea [Function unknown].
Probab=95.72  E-value=0.052  Score=33.14  Aligned_cols=104  Identities=25%  Similarity=0.320  Sum_probs=72.3

Q ss_pred             CHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             98999999999998798557707866898999999999999740888860205411204874124456879899999999
Q gi|254780485|r  181 TFEDRLQTLENVRKSGIKVCCGGILGLGEMIDDRIDMLLTLANLSTPPESIPINLLIPIPGSKFEENKKVDPIEHVRIIS  260 (328)
Q Consensus       181 ~~~~~l~~~~~a~~~G~~~~sg~l~G~gEt~eeri~~l~~lr~l~~~~~~v~~~~~~p~~gt~l~~~~~~~~~e~lr~iA  260 (328)
T Consensus       204 PLeEmk~VaEtArk~GkGvea--I~hvgDGyDdli~G~kA~ve~~vDv-------f-vvEGgPFNrA~-dRL~AFa~Ava  272 (505)
T COG4018         204 PLEEMKRVAETARKSGKGVEA--ILHVGDGYDDLIDGLKAAVEEVVDV-------F-VVEGGPFNRAE-DRLSAFARAVA  272 (505)
T ss_pred             CHHHHHHHHHHHHHHCCCCEE--EEEECCCCHHHHHHHHHHHHHCCCE-------E-EECCCCCCHHH-HHHHHHHHHHH
T ss_conf             789999999999870888216--9882477077888999998744838-------9-98178754166-78999998787


Q ss_pred             HHHHHCCCCCCEEEEHHHHHCHHHHHHHHHHCCCEEEEC
Q ss_conf             999968687214231156516568999998099889977
Q gi|254780485|r  261 VARILMPKSRLRLAAGRAMMSDELQALCFFSGANSIFVG  299 (328)
Q Consensus       261 i~RL~lP~~~i~i~~~~~~~~~~~~~~~L~~GaN~~~~g  299 (328)
T Consensus       273 a~Ril~pGkvVaTNGAYE----DEcrvGLRaGLN~iltG  307 (505)
T COG4018         273 ACRILAPGKVVATNGAYE----DECRVGLRAGLNGILTG  307 (505)
T ss_pred             HHEECCCCCEEEECCCCH----HHHHHHHHHCHHHHHCC
T ss_conf             640104783784067413----66787677320156507