HHsearch alignment for GI: 254780485 and conserved domain: PRK00955
>PRK00955 hypothetical protein; Provisional.
Probab=98.24 E-value=8.3e-05 Score=51.89 Aligned_cols=202 Identities=18% Similarity=0.260 Sum_probs=108.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEE-EECCCC------------------------
Q ss_conf 786834232124335477756410006857999999999964-983899-730368------------------------
Q gi|254780485|r 62 TGGCPENCGYCNQSVHNKSKLKASKLINVDQVLKEAKNAKEN-GATRYC-MGAAWR------------------------ 115 (328)
Q Consensus 62 TN~C~~~C~fCaf~~~~~~~~~~~~~~~~Eei~~~a~~~~~~-G~~~~~-l~~~~~------------------------ 115 (328)
T Consensus 298 hRGCfGgCsFCaIt~HQGr---~I~sRS~~SIl~E~~~~~~~p~FkG~IsDvGGPTANmy~~~C~~~~~~g~C~~~~Cl~ 374 (599)
T PRK00955 298 HRGCFGGCSFCAITFHQGR---FIQSRSKESILREAKELTQMPDFKGYIHDVGGPTANFRKMACKKQEKCGACKNKQCLF 374 (599)
T ss_pred CCCCCCCCCCCCCCCCCCC---CEEECCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCCCCHHHCCCCCCCCCCC
T ss_conf 4762567821022011787---0344488999999999973889877871389824654306479802028899967899
Q ss_pred ----CCCCCCHHHHHHHHHHHCCC-C-CCEEEECCC--------CCHHHHHHHHCCCCCEE-EEECC-CCHHHHHCCC-C
Q ss_conf ----88744289999988762136-8-832410256--------99999998741576069-75134-3777732058-8
Q gi|254780485|r 116 ----EPKERDLSIIVDMIKGVKSL-G-LETCMTLGM--------LSFEQAQILSKAGLDYY-NHNID-TSERFYPHVT-T 178 (328)
Q Consensus 116 ----~~~~~~~~~~~e~i~~i~~~-~-~~i~~~~g~--------~~~~~~~~Lk~aG~~~~-~~~le-t~~~~~~~~~-~ 178 (328)
T Consensus 375 P~~C~nL~~dh~~~~~LLrk~r~lpgVKkvfi~SGiRyDl~l~d~~~~yl~eL~~~HvsGqLKVAPEH~~~~VL~~M~KP 454 (599)
T PRK00955 375 PKPCKNLDVDHTEYLDLLRKVRKLPGVKKVFIRSGIRYDYLLHDKNDEFFKELCEHHVSGQLKVAPEHISDRVLKYMGKP 454 (599)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCC
T ss_conf 98888987883899999999854899767774122655555136886999999977078706757754683788974799
Q ss_pred -CCCHHHHHHHH-HHHHHCCCC--CCCEEEECC-CCCHHHHHHHHHHHHHCCCCCCEEECCCEEECCCCC----------
Q ss_conf -88989999999-999987985--577078668-989999999999997408888602054112048741----------
Q gi|254780485|r 179 -THTFEDRLQTL-ENVRKSGIK--VCCGGILGL-GEMIDDRIDMLLTLANLSTPPESIPINLLIPIPGSK---------- 243 (328)
Q Consensus 179 -~~~~~~~l~~~-~~a~~~G~~--~~sg~l~G~-gEt~eeri~~l~~lr~l~~~~~~v~~~~~~p~~gt~---------- 243 (328)
T Consensus 455 ~~~~~~~F~~~F~~~~k~~Gk~QylvPY~issHPGct~~dm~~La~~lk~~~~~peQV--QdF~PTP~T~sT~MYyTG~d 532 (599)
T PRK00955 455 SREVYDKFVKKFDRINKKLGKKQFLVPYLMSSHPGSTLEDAIELAEYLKDLGYQPEQV--QDFYPTPGTLSTTMYYTGLD 532 (599)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHC--EEEECCCCHHHHHHHHHCCC
T ss_conf 8189999999999999985897304777881699989999999999999739997773--11007851898889882788
Q ss_pred -CCCCC---CCCHHHHHHHHHHHHHHCCC
Q ss_conf -24456---87989999999999996868
Q gi|254780485|r 244 -FEENK---KVDPIEHVRIISVARILMPK 268 (328)
Q Consensus 244 -l~~~~---~~~~~e~lr~iAi~RL~lP~ 268 (328)
T Consensus 533 P~t~~~V~V~k~~~ek~~Qrall~y~~p~ 561 (599)
T PRK00955 533 PLTMEPVYVPKTKEEKAMQRALLQYRNPK 561 (599)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 88798502469988999999998404800