HHsearch alignment for GI: 254780485 and conserved domain: PRK01254
>PRK01254 hypothetical protein; Provisional.
Probab=98.36 E-value=2.5e-05 Score=55.43 Aligned_cols=203 Identities=15% Similarity=0.206 Sum_probs=111.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--CCCEEEEEECCCCC-----------------------
Q ss_conf 78683423212433547775641000685799999999996--49838997303688-----------------------
Q gi|254780485|r 62 TGGCPENCGYCNQSVHNKSKLKASKLINVDQVLKEAKNAKE--NGATRYCMGAAWRE----------------------- 116 (328)
Q Consensus 62 TN~C~~~C~fCaf~~~~~~~~~~~~~~~~Eei~~~a~~~~~--~G~~~~~l~~~~~~----------------------- 116 (328)
T Consensus 379 ~RGCfGgCsFCaIt~HQG---R~IqSRS~eSIl~E~~~i~~k~p~FkG~IsDvGGPTANMy~~~C~~~~~~~~C~r~sCl 455 (742)
T PRK01254 379 MRGCFGGCSFCSITEHEG---RIIQSRSEESIINEIEAIRDKVPGFTGVISDLGGPTANMYRLGCKSPKAEQTCRRLSCV 455 (742)
T ss_pred CCCCCCCCCEEEEEECCC---CEEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHCCCCCCCCHHCCCCCCCCCC
T ss_conf 485445784132230168---63343278999999999996489986776358871365431547981100789997789
Q ss_pred ------CCCCCHHHHHHHHHHHCCC-CC-CEEEECC------CCCHHHHHHHHCCCCCEEE-EECC-CCHHHHHCCC-C-
Q ss_conf ------8744289999988762136-88-3241025------6999999987415760697-5134-3777732058-8-
Q gi|254780485|r 117 ------PKERDLSIIVDMIKGVKSL-GL-ETCMTLG------MLSFEQAQILSKAGLDYYN-HNID-TSERFYPHVT-T- 178 (328)
Q Consensus 117 ------~~~~~~~~~~e~i~~i~~~-~~-~i~~~~g------~~~~~~~~~Lk~aG~~~~~-~~le-t~~~~~~~~~-~- 178 (328)
T Consensus 456 ~P~iC~nL~~dH~~~i~Llrk~R~lpGVKkVfI~SGiRyDLa~~d~eylkELv~hHVsGqLKVAPEH~~~~vL~~M~KP~ 535 (742)
T PRK01254 456 YPDICPHLDTDHSPTIDLYRRARDLKGIKKILIASGVRYDLAVEDPEYVKELVTHHVGGYLKIAPEHTEEGPLSKMMKPG 535 (742)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCC
T ss_conf 98778888788099999999986289865555312054555533889999999873687066576546858999862998
Q ss_pred CCCHHHHHHHH-HHHHHCCCC--CCCEEEECC-CCCHHHHHHHHHHHHHCCCCCCEEECCCEEECCCCC-----------
Q ss_conf 88989999999-999987985--577078668-989999999999997408888602054112048741-----------
Q gi|254780485|r 179 THTFEDRLQTL-ENVRKSGIK--VCCGGILGL-GEMIDDRIDMLLTLANLSTPPESIPINLLIPIPGSK----------- 243 (328)
Q Consensus 179 ~~~~~~~l~~~-~~a~~~G~~--~~sg~l~G~-gEt~eeri~~l~~lr~l~~~~~~v~~~~~~p~~gt~----------- 243 (328)
T Consensus 536 ~~~y~rF~~~F~~~sk~~GK~QyLiPYfisaHPG~t~~Dm~~LA~~lk~~~~~peQV--QdF~PTP~t~sT~MYyTg~dP 613 (742)
T PRK01254 536 MGSYDRFKELFDKYSKEAGKEQYLIPYFISAHPGTTDEDMVNLALWLKKNRFRLDQV--QNFYPSPMANATTMYYTGKNP 613 (742)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHC--EEEECCCCHHHHHHHHCCCCC
T ss_conf 689999999999999985897036877870689989999999999999739997563--120278617888788707786
Q ss_pred C-------CCCCCC-CHHHHHHHHHHHHHHCCCC
Q ss_conf 2-------445687-9899999999999968687
Q gi|254780485|r 244 F-------EENKKV-DPIEHVRIISVARILMPKS 269 (328)
Q Consensus 244 l-------~~~~~~-~~~e~lr~iAi~RL~lP~~ 269 (328)
T Consensus 614 l~~v~~t~e~V~v~k~~~ek~lqrAll~y~~P~N 647 (742)
T PRK01254 614 LKKVKYKSEDVPVPKGDRQRRLHKALLRYHDPAN 647 (742)
T ss_pred CCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 6455667886236788889999999986348233