HHsearch alignment for GI: 254780485 and conserved domain: PRK03220
>PRK03220 consensus.
Probab=95.25 E-value=0.27 Score=28.40 Aligned_cols=200 Identities=13% Similarity=0.165 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHH-CCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECCC--
Q ss_conf 99999999996498389973036888744289999988762-136883241025699999998741576069751343--
Q gi|254780485|r 92 QVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGV-KSLGLETCMTLGMLSFEQAQILSKAGLDYYNHNIDT-- 168 (328)
Q Consensus 92 ei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i-~~~~~~i~~~~g~~~~~~~~~Lk~aG~~~~~~~let-- 168 (328)
T Consensus 32 dP~~~a~~~~~~G~d~lhivDld~a-~~-g~~~n~~~I~~i~~~~~~pi~vGGGIrs~e~~~~ll~~GadkVvigs~a~~ 109 (257)
T PRK03220 32 DPVELAAVYDAEGADELTFLDVTAS-SS-GRATMLDVVRRTAEQVFIPLTVGGGVRTVEDVDSLLRAGADKVSVNTAAIA 109 (257)
T ss_pred CHHHHHHHHHHCCCCEEEEEECCCC-CC-CCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEECHHHHHH
T ss_conf 9999999999869998999908887-56-763079999999850696489847858799999999819750872066775
Q ss_pred CHHHHHCCCCCCCHHHHHHHHHHHHHCCCC-----------------CCCE-EEECC---CCCHHHHHHHHHHHHHCCCC
Q ss_conf 777732058888989999999999987985-----------------5770-78668---98999999999999740888
Q gi|254780485|r 169 SERFYPHVTTTHTFEDRLQTLENVRKSGIK-----------------VCCG-GILGL---GEMIDDRIDMLLTLANLSTP 227 (328)
Q Consensus 169 ~~~~~~~~~~~~~~~~~l~~~~~a~~~G~~-----------------~~sg-~l~G~---gEt~eeri~~l~~lr~l~~~ 227 (328)
T Consensus 110 ~p~~~~~~---------------~~~fG~q~Iv~siD~k~~~~~~~~~~~g~~v~~~g~~~~t~~~~~~~i~~~~~~g~- 173 (257)
T PRK03220 110 RPELLAEL---------------ARRFGSQCIVLSVDARRVPVGSAPTPSGFEVTTHGGRRGTGIDAVEWAARGAELGV- 173 (257)
T ss_pred CCHHHHHH---------------HHHCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHCCC-
T ss_conf 94777899---------------98709866999999886256774346874999728826028759999999862698-
Q ss_pred CCEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHHHHHHHCCCEEEECCEEECCCC
Q ss_conf 86020541120487412445687989999999999996868721423115651656899999809988997786651588
Q gi|254780485|r 228 PESIPINLLIPIPGSKFEENKKVDPIEHVRIISVARILMPKSRLRLAAGRAMMSDELQALCFFSGANSIFVGDTLLTAKN 307 (328)
Q Consensus 228 ~~~v~~~~~~p~~gt~l~~~~~~~~~e~lr~iAi~RL~lP~~~i~i~~~~~~~~~~~~~~~L~~GaN~~~~g~~~~t~~g 307 (328)
T Consensus 174 -geil~-tdI~rDGt-~~G---~-d~~l~~~i~---~~~-~~piIasGGv~s-~~di~~-l~~~g~~gv~~g~a~-~~~~ 239 (257)
T PRK03220 174 -GEILL-NSMDADGT-KAG---F-DLEMLRAVR---AAV-TVPVIASGGAGA-VEHFAP-AVAAGADAVLAASVF-HFGE 239 (257)
T ss_pred -CEEEE-EEECCCCC-CCC---C-CHHHHHHHH---HHC-CCCEEEECCCCC-HHHHHH-HHHCCCCEEEEHHHH-HCCC
T ss_conf -88999-98868660-237---8-969999999---748-999899878999-999999-997899799874687-8899
Q ss_pred CCHHHHHHHHHHCCCC
Q ss_conf 8989999999982985
Q gi|254780485|r 308 PSYNKDTILFNRLGLI 323 (328)
Q Consensus 308 ~~~~~~~~~i~~~G~~ 323 (328)
T Consensus 240 ~s~~~~k~~l~~~~i~ 255 (257)
T PRK03220 240 LTIGQVKAALAAAGIT 255 (257)
T ss_pred CCHHHHHHHHHHCCCC
T ss_conf 8899999999987597