HHsearch alignment for GI: 254780485 and conserved domain: PRK07028
>PRK07028 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated.
Probab=94.60 E-value=0.39 Score=27.26 Aligned_cols=214 Identities=15% Similarity=0.195 Sum_probs=100.1
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC-CCCHHHHHHHHHHHCC-CCCCEEEECCCCCHHHHHHHHCCCCCEEE
Q ss_conf 006857999999999964983899730368887-4428999998876213-68832410256999999987415760697
Q gi|254780485|r 86 KLINVDQVLKEAKNAKENGATRYCMGAAWREPK-ERDLSIIVDMIKGVKS-LGLETCMTLGMLSFEQAQILSKAGLDYYN 163 (328)
Q Consensus 86 ~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~-~~~~~~~~e~i~~i~~-~~~~i~~~~g~~~~~~~~~Lk~aG~~~~~ 163 (328)
T Consensus 113 DlI~v~d~~~ra~el~~lGvd~I~vH~G~D~Q~~g~~---p~~~l~~v~~~~~~~vAV-AGGi~~~t~~~~v~~GAdIvI 188 (429)
T PRK07028 113 DLINVPDPVKRAVELEELGVDIINVHVGIDQQMLGKD---PLELLKKVSEEVSIPIAA-AGGLDAETAVKAVEAGADIVI 188 (429)
T ss_pred EECCCCCHHHHHHHHHHCCCCEEEEEEEECHHHCCCC---HHHHHHHHHHHCCCEEEE-ECCCCHHHHHHHHHCCCCEEE
T ss_conf 8558998899999999709988999762335531798---499999999755971899-668787769999975998999
Q ss_pred EECCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHH-HHHH------CCCCCCEEECCCE
Q ss_conf 51343777732058888989999999999987985577078668989999999999-9974------0888860205411
Q gi|254780485|r 164 HNIDTSERFYPHVTTTHTFEDRLQTLENVRKSGIKVCCGGILGLGEMIDDRIDMLL-TLAN------LSTPPESIPINLL 236 (328)
Q Consensus 164 ~~let~~~~~~~~~~~~~~~~~l~~~~~a~~~G~~~~sg~l~G~gEt~eeri~~l~-~lr~------l~~~~~~v~~~~~ 236 (328)
T Consensus 189 VGga--------I~~a~dp~~aAr~ir~ai~~~~~~~~~----~~~~~~~~~~~~~~~vs~~n~sdamhr~~~~~~~~p~ 256 (429)
T PRK07028 189 VGGN--------IYKSADVTGAARDIREALDSPPVPTDK----FKKSLDEEIRELFKEVSTSNISDAMHRKGAMKGLKPL 256 (429)
T ss_pred ECCC--------CCCCCCHHHHHHHHHHHHHCCCCCCCC----CCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEC
T ss_conf 8940--------057999799999999997376767652----0022389999999851887611566640455785442
Q ss_pred EECCCCCCCCCC---CCCHHHHHHHHHHHHHHCCCCCCEEEE-HHH-H-HCHHHHHHHHHHCCCEEEECCEEECCCCCCH
Q ss_conf 204874124456---879899999999999968687214231-156-5-1656899999809988997786651588898
Q gi|254780485|r 237 IPIPGSKFEENK---KVDPIEHVRIISVARILMPKSRLRLAA-GRA-M-MSDELQALCFFSGANSIFVGDTLLTAKNPSY 310 (328)
Q Consensus 237 ~p~~gt~l~~~~---~~~~~e~lr~iAi~RL~lP~~~i~i~~-~~~-~-~~~~~~~~~L~~GaN~~~~g~~~~t~~g~~~ 310 (328)
T Consensus 257 --~~~~k~~G~avTV~t~~gD~~~~~~AiD~A~PGDViVId~~G~d~A~WGeLmt~aA~~rGIaG~VIDGa--------- 325 (429)
T PRK07028 257 --VRGLKMVGPAVTVQTFAGDWAKPVEAIDVAEPGDVLVIDNCSSDIAPWGGLATLSCLNKGIAGVVIDGA--------- 325 (429)
T ss_pred --CCCCEEEEEEEEEEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCEEEHHHHHHHHHHCCCEEEEEECC---------
T ss_conf --468634666799995688740567786247999789996799975130899999999879819997015---------
Q ss_pred HHHHHHHHHCCCCCCCC
Q ss_conf 99999999829853247
Q gi|254780485|r 311 NKDTILFNRLGLIPDLS 327 (328)
Q Consensus 311 ~~~~~~i~~~G~~P~~~ 327 (328)
T Consensus 326 vRDv~eIr~lgf-PVFa 341 (429)
T PRK07028 326 VRDVDEIRKLGF-PVFA 341 (429)
T ss_pred CCCHHHHHHCCC-CEEE
T ss_conf 669999984599-8698