HHsearch alignment for GI: 254780485 and conserved domain: PRK13347
>PRK13347 coproporphyrinogen III oxidase; Provisional.
Probab=99.49 E-value=1.1e-11 Score=97.86 Aligned_cols=206 Identities=15% Similarity=0.211 Sum_probs=135.0
Q ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCC-CC--CCCCCCCCCHHHHHHHHHHHHH-----CCCEEEEEECCCCCCCCC
Q ss_conf 985699986453078683423212433547-77--5641000685799999999996-----498389973036888744
Q gi|254780485|r 49 PNHIQLSKLLNIKTGGCPENCGYCNQSVHN-KS--KLKASKLINVDQVLKEAKNAKE-----NGATRYCMGAAWREPKER 120 (328)
Q Consensus 49 g~~V~~~~~in~~TN~C~~~C~fCaf~~~~-~~--~~~~~~~~~~Eei~~~a~~~~~-----~G~~~~~l~~~~~~~~~~ 120 (328)
T Consensus 48 ~~plsLYiHIP----FC~~~C~YC~f~~~~~~~~~~~~~Yl----~~L~~Ei~~~~~~~~~~~~v~ti~~G--GGTPs~L 117 (453)
T PRK13347 48 EEPVSLYLHVP----FCRSLCWFCGCNTIITQRDAPVEAYV----AALIREIRLVAALLPQRRRVSQLHWG--GGTPTIL 117 (453)
T ss_pred CCCEEEEEECC----CCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHHHHHCCCCEEEEEEEC--CCCHHHC
T ss_conf 99869998527----71680899989733778866799999----99999999988762789807899978--8482859
Q ss_pred CHHHHHHHHHHHCC---C--CCCEEE--ECCCCCHHHHHHHHCCCCCEEEEECCC-CHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 28999998876213---6--883241--025699999998741576069751343-777732058888989999999999
Q gi|254780485|r 121 DLSIIVDMIKGVKS---L--GLETCM--TLGMLSFEQAQILSKAGLDYYNHNIDT-SERFYPHVTTTHTFEDRLQTLENV 192 (328)
Q Consensus 121 ~~~~~~e~i~~i~~---~--~~~i~~--~~g~~~~~~~~~Lk~aG~~~~~~~let-~~~~~~~~~~~~~~~~~l~~~~~a 192 (328)
T Consensus 118 ~~~~l~~ll~~l~~~f~~~~~~EitiE~nP~~~~~~~l~~l~~~GvNRlSlGVQsfd~~vl~~lgR~h~~~~~~~av~~a 197 (453)
T PRK13347 118 NPDQFERLMAALRDAFDFAPEAEIAVEIDPRTVTAEMLQALAALGFNRASFGVQDFDPQVQKAINRIQPEEMVARAVELL 197 (453)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99999999999997589999966999867786899999999864986588713457878999825989999999999999
Q ss_pred HHCCCC-CCCEEEECC-CCCHHHHHHHHHHHHHCCCCCCEEECCCEEECCCCC-----CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 987985-577078668-989999999999997408888602054112048741-----2445687989999999999996
Q gi|254780485|r 193 RKSGIK-VCCGGILGL-GEMIDDRIDMLLTLANLSTPPESIPINLLIPIPGSK-----FEENKKVDPIEHVRIISVARIL 265 (328)
Q Consensus 193 ~~~G~~-~~sg~l~G~-gEt~eeri~~l~~lr~l~~~~~~v~~~~~~p~~gt~-----l~~~~~~~~~e~lr~iAi~RL~ 265 (328)
T Consensus 198 r~~Gf~~iniDLIyGlP~QT~~~~~~tL~~~~~l~p--dhiS~Y~l~~~p~~~~~qr~i~~~~LP~~~~~~~m~~~a~~~ 275 (453)
T PRK13347 198 RAAGFESINFDLIYGLPHQTVESFRETLDKVIALSP--DRIAVFGYAHVPSRRKNQRLIDEAALPDAEERLRQARAAADR 275 (453)
T ss_pred HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCC--CEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 981898655555524899989999999999983199--978852320265323565325767895999999999999999
Q ss_pred C
Q ss_conf 8
Q gi|254780485|r 266 M 266 (328)
Q Consensus 266 l 266 (328)
T Consensus 276 L 276 (453)
T PRK13347 276 L 276 (453)
T ss_pred H
T ss_conf 9