HHsearch alignment for GI: 254780485 and conserved domain: PRK13762
>PRK13762 tRNA-modifying enzyme; Provisional.
Probab=97.24 E-value=0.02 Score=35.89 Aligned_cols=183 Identities=13% Similarity=0.207 Sum_probs=99.9
Q ss_pred CCCCCCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHC---CC-----------------EEEEEECCCCCCCCC
Q ss_conf 68342321243354777564---10006857999999999964---98-----------------389973036888744
Q gi|254780485|r 64 GCPENCGYCNQSVHNKSKLK---ASKLINVDQVLKEAKNAKEN---GA-----------------TRYCMGAAWREPKER 120 (328)
Q Consensus 64 ~C~~~C~fCaf~~~~~~~~~---~~~~~~~Eei~~~a~~~~~~---G~-----------------~~~~l~~~~~~~~~~ 120 (328)
T Consensus 67 ~C~~~CvfCW--R~~~~~~~~~~~~~~DdPe~Ive~~i~~h~~li~g~kG~p~v~~er~~EA~~p~H~AiSL~GEPtl-- 142 (321)
T PRK13762 67 WCNQRCLFCW--RPLEEDVGLLKPPEWDDPEEIVEESIKEQRKLLSGYKGNPKVDKEKFEEALEPKHVAISLSGEPTL-- 142 (321)
T ss_pred HHHCCCEEEC--CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHEEHHHCCCCCC--
T ss_conf 7744485656--899888766677888898999999999999997305899998989998727910010220488632--
Q ss_pred CHHHHHHHHHHHCCCCCCEE-EECCCCCHHHHHHHHCCCCCEEEEECCC-CHHHHHCCCCC---CCHHHHHHHHHHHHHC
Q ss_conf 28999998876213688324-1025699999998741576069751343-77773205888---8989999999999987
Q gi|254780485|r 121 DLSIIVDMIKGVKSLGLETC-MTLGMLSFEQAQILSKAGLDYYNHNIDT-SERFYPHVTTT---HTFEDRLQTLENVRKS 195 (328)
Q Consensus 121 ~~~~~~e~i~~i~~~~~~i~-~~~g~~~~~~~~~Lk~aG~~~~~~~let-~~~~~~~~~~~---~~~~~~l~~~~~a~~~ 195 (328)
T Consensus 143 -YP~l~eLi~~~h~r~~stFLVTNg~~-P~~l~~l~~~-PTQLYvSldAp~~e~~k~i~rPl~~d~Wer~~~sL~~L~~~ 219 (321)
T PRK13762 143 -YPRLPELIEEFHKRGFTTFLVTNGTR-PDVLEKLEAE-PTQLYVSLDAPDKETYNRINRPVIPDAWERILETLELLPSK 219 (321)
T ss_pred -CHHHHHHHHHHHHCCCCEEEEECCCC-HHHHHHCCCC-CCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
T ss_conf -02189999999857983799828989-8999856676-54279980069999999861655331899999999975437
Q ss_pred CCCCC--CEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCEEE--CCCCCCCCCCCCCHHHHHH
Q ss_conf 98557--70786689899999999999974088886020541120--4874124456879899999
Q gi|254780485|r 196 GIKVC--CGGILGLGEMIDDRIDMLLTLANLSTPPESIPINLLIP--IPGSKFEENKKVDPIEHVR 257 (328)
Q Consensus 196 G~~~~--sg~l~G~gEt~eeri~~l~~lr~l~~~~~~v~~~~~~p--~~gt~l~~~~~~~~~e~lr 257 (328)
T Consensus 220 ~~RTV~R~TLVkg~Nm~~~~~yA---~Li~~~-~P~FIEvK~ym~~G~Sr~rLt~~nmP~heEV~~ 281 (321)
T PRK13762 220 KTRTVIRITLVKGLNMTDPEGYA---KLIERA-NPDFVEVKAYMHVGYSRNRLTRDNMPSHEEVRE 281 (321)
T ss_pred CCCEEEEEEEECCCCCCCHHHHH---HHHHHC-CCCEEEEEEEEEECCCCCCCCHHHCCCHHHHHH
T ss_conf 98759999876565767989999---999854-998798711798426777677223998899999