HHsearch alignment for GI: 254780485 and conserved domain: TIGR00423
>TIGR00423 TIGR00423 conserved hypothetical protein TIGR00423; InterPro: IPR005244 This entry describes a family of conserved hypothetical proteins with no known function. .
Probab=100.00 E-value=0 Score=461.85 Aligned_cols=272 Identities=19% Similarity=0.333 Sum_probs=229.4
Q ss_pred EEEEEEEEEC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCH-----HHH
Q ss_conf 6999864530-7868342321243354777564100068579999999999649838997303688874428-----999
Q gi|254780485|r 52 IQLSKLLNIK-TGGCPENCGYCNQSVHNKSKLKASKLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDL-----SII 125 (328)
Q Consensus 52 V~~~~~in~~-TN~C~~~C~fCaf~~~~~~~~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~-----~~~ 125 (328)
T Consensus 1 VtfvVNRNINfTNIC~~~C~FCAF~~~~k~--~~~Y~Ls~eEI~~Kv~ea~~~G~tE~~iQGGlnP~--~~~nGssl~yy 76 (331)
T TIGR00423 1 VTFVVNRNINFTNICVGKCKFCAFRRREKD--KDAYVLSLEEILRKVKEAVAKGATEICIQGGLNPQ--LDINGSSLEYY 76 (331)
T ss_pred CEEECCCCCCCCHHHHHCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC--CCCCCCHHHHH
T ss_conf 935316656753002324796331134689--88814077999999999997198278852342788--76454149999
Q ss_pred HHHHHHHCCCCC---CEEEEC-------------CCCC-HHHHHHHHCCCCCEE-EEECCC-CHHHHHCCCC-CCCHHHH
Q ss_conf 998876213688---324102-------------5699-999998741576069-751343-7777320588-8898999
Q gi|254780485|r 126 VDMIKGVKSLGL---ETCMTL-------------GMLS-FEQAQILSKAGLDYY-NHNIDT-SERFYPHVTT-THTFEDR 185 (328)
Q Consensus 126 ~e~i~~i~~~~~---~i~~~~-------------g~~~-~~~~~~Lk~aG~~~~-~~~let-~~~~~~~~~~-~~~~~~~ 185 (328)
T Consensus 77 ~~l~~~Ik~~~pPyG~~hiHafSp~Ev~f~A~~~~~~~e~EvL~~LK~aGL~SmPGtgAEILdD~vRr~IcP~K~~s~eW 156 (331)
T TIGR00423 77 EELFRAIKQEFPPYGDVHIHAFSPMEVYFLAKNEGLSIEKEVLKRLKKAGLDSMPGTGAEILDDSVRRKICPNKLSSDEW 156 (331)
T ss_pred HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHCCCCCCHHHH
T ss_conf 99999997417896524761468689999998618978899999988850356777622653033587547798872789
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHC------CCCCCEEE--CCCEEECCCCC--CCC--CCCCCHH
Q ss_conf 999999998798557707866898999999999999740------88886020--54112048741--244--5687989
Q gi|254780485|r 186 LQTLENVRKSGIKVCCGGILGLGEMIDDRIDMLLTLANL------STPPESIP--INLLIPIPGSK--FEE--NKKVDPI 253 (328)
Q Consensus 186 l~~~~~a~~~G~~~~sg~l~G~gEt~eeri~~l~~lr~l------~~~~~~v~--~~~~~p~~gt~--l~~--~~~~~~~ 253 (328)
T Consensus 157 lev~~~AH~~GiptTATMMfGHve~~~h~v~HL~rir~iQ~~~~~QekTGGFteFIPL~F~~~n~P~~~~~~~~~~~s~~ 236 (331)
T TIGR00423 157 LEVIKTAHRLGIPTTATMMFGHVEEPEHRVEHLLRIRKIQSTSLVQEKTGGFTEFIPLPFQPENAPIYLEGEVRKGASGI 236 (331)
T ss_pred HHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 99999998666962101123552767889999999987517002335227732101467788877711140023788868
Q ss_pred HHHHHHHHHHHHCC-CCCCEEEEHHHHHCHHHHHHHHHHCCC---EEEECCEEECCCCC------CHHHHHHHHHHCCCC
Q ss_conf 99999999999686-872142311565165689999980998---89977866515888------989999999982985
Q gi|254780485|r 254 EHVRIISVARILMP-KSRLRLAAGRAMMSDELQALCFFSGAN---SIFVGDTLLTAKNP------SYNKDTILFNRLGLI 323 (328)
Q Consensus 254 e~lr~iAi~RL~lP-~~~i~i~~~~~~~~~~~~~~~L~~GaN---~~~~g~~~~t~~g~------~~~~~~~~i~~~G~~ 323 (328)
T Consensus 237 ~~Lk~~AiSRI~L~gk~I~NIqASWV~lG~~~a~vAL~~GANDlGGTl~EE~i~~aAGA~~~~~~~~E~l~~~ik~~G~~ 316 (331)
T TIGR00423 237 DDLKVIAISRILLNGKNIKNIQASWVKLGLKLAQVALEFGANDLGGTLMEENISKAAGAKTGVGLEVEELIELIKDAGRV 316 (331)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 99999999998828841223250688854789999998177436875786532110278888867889999999984885
Q ss_pred CCCC
Q ss_conf 3247
Q gi|254780485|r 324 PDLS 327 (328)
Q Consensus 324 P~~~ 327 (328)
T Consensus 317 ~~~R 320 (331)
T TIGR00423 317 PAQR 320 (331)
T ss_pred CCCC
T ss_conf 3101