HHsearch alignment for GI: 254780485 and conserved domain: TIGR02109

>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E; InterPro: IPR011843 This entry describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.; GO: 0051539 4 iron 4 sulfur cluster binding, 0018189 pyrroloquinoline quinone biosynthetic process.
Probab=98.88  E-value=2e-08  Score=76.15  Aligned_cols=196  Identities=18%  Similarity=0.248  Sum_probs=123.1

Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             453078683423212433547775-6410006857999999999964983899730368887442899999887621368
Q gi|254780485|r   58 LNIKTGGCPENCGYCNQSVHNKSK-LKASKLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVKSLG  136 (328)
Q Consensus        58 in~~TN~C~~~C~fCaf~~~~~~~-~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~~~~  136 (328)
T Consensus        11 aEL-ThRCPL~CPYCS----NPLel~R~~~EL~T~~W~~Vl~qAa~lGvlqlHf-SGGEP~aR~DL~---eLv~~A~~LG   81 (363)
T TIGR02109        11 AEL-THRCPLQCPYCS----NPLELARRKAELTTEEWTDVLTQAAELGVLQLHF-SGGEPLARPDLV---ELVAHARRLG   81 (363)
T ss_pred             HHH-HHCCCCCCCCCC----CCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEC-CCCCCCCCCCHH---HHHHHHHHCC
T ss_conf             998-725888777989----7068885114688889999999998539067513-077666335779---9999997758


Q ss_pred             C--CEEEECCCCCHHHHHHHHCCCCCEEEEEC-CCCHHHHHCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHH
Q ss_conf             8--32410256999999987415760697513-437777320588-8898999999999998798557707866898999
Q gi|254780485|r  137 L--ETCMTLGMLSFEQAQILSKAGLDYYNHNI-DTSERFYPHVTT-THTFEDRLQTLENVRKSGIKVCCGGILGLGEMID  212 (328)
Q Consensus       137 ~--~i~~~~g~~~~~~~~~Lk~aG~~~~~~~l-et~~~~~~~~~~-~~~~~~~l~~~~~a~~~G~~~~sg~l~G~gEt~e  212 (328)
T Consensus        82 lYtNLITSGvGLt~~rl~~L~~aGLDHvQlSfQ~vd~~~a~~iaG~k~A~~~Kl~~A~~v~~~g~PltLN~V~-HR~Ni~  160 (363)
T TIGR02109        82 LYTNLITSGVGLTEARLDALADAGLDHVQLSFQGVDEALADRIAGLKNAFEQKLAVARAVKAAGLPLTLNFVL-HRHNID  160 (363)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEHCC-CCCHHH
T ss_conf             7014677634567999999975798578876414787888641250258999999999999618981760200-242021


Q ss_pred             HHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCCC--CCCCH---HHHHHHHHHHHHHC
Q ss_conf             99999999974088886020541120487412445--68798---99999999999968
Q gi|254780485|r  213 DRIDMLLTLANLSTPPESIPINLLIPIPGSKFEEN--KKVDP---IEHVRIISVARILM  266 (328)
Q Consensus       213 eri~~l~~lr~l~~~~~~v~~~~~~p~~gt~l~~~--~~~~~---~e~lr~iAi~RL~l  266 (328)
T Consensus       161 ~i~~~i~La~~L~AdrvE~A~--~QyYGWA-~~NR~aLlPt~~Ql~~a~r~V~~aRer~  216 (363)
T TIGR02109       161 QIPEIIELAIELGADRVELAT--TQYYGWA-LLNRAALLPTREQLEEATRIVEEARERL  216 (363)
T ss_pred             HHHHHHHHHHHCCCCEEEEEE--ECCHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             367899999863898488874--0202256-7745424898899999999999999998