HHsearch alignment for GI: 254780485 and conserved domain: TIGR03365
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=96.70 E-value=0.0078 Score=38.66 Aligned_cols=88 Identities=16% Similarity=0.319 Sum_probs=50.8
Q ss_pred EEECCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 453078683423212433-5477756410006857999999999964983899730368887442899999887621368
Q gi|254780485|r 58 LNIKTGGCPENCGYCNQS-VHNKSKLKASKLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVKSLG 136 (328)
Q Consensus 58 in~~TN~C~~~C~fCaf~-~~~~~~~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~~~~ 136 (328)
T Consensus 25 vFvR~~GCnl~C~~CDT~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~V~i-TGGEPllq~~---~~~L~~~l~~~g 100 (238)
T TIGR03365 25 MFVRTGGCDYRCSWCDSLFTWDGSAKDTWRPMTAEEVWQELKALGGGTPLHVSL-SGGNPALQKP---LGELIDLGKAKG 100 (238)
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE-CCCCHHHHCC---HHHHHHHHHHCC
T ss_conf 999408989867658988761787887756378999999999834898618994-5998344418---999999998579
Q ss_pred CCEEEE-CCCCCHH
Q ss_conf 832410-2569999
Q gi|254780485|r 137 LETCMT-LGMLSFE 149 (328)
Q Consensus 137 ~~i~~~-~g~~~~~ 149 (328)
T Consensus 101 ~~v~iETnGt~~~~ 114 (238)
T TIGR03365 101 YRFALETQGSVWQD 114 (238)
T ss_pred CEEEEECCCCCCCC
T ss_conf 84999789987600