HHsearch alignment for GI: 254780485 and conserved domain: pfam04055
>pfam04055 Radical_SAM Radical SAM superfamily. Radical SAM proteins catalyse diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation.
Probab=99.57 E-value=1.5e-13 Score=110.46 Aligned_cols=158 Identities=25% Similarity=0.362 Sum_probs=112.3
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCH-HHHHHHHHHHC--CC
Q ss_conf 5307868342321243354777564100068579999999999649838997303688874428-99999887621--36
Q gi|254780485|r 59 NIKTGGCPENCGYCNQSVHNKSKLKASKLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDL-SIIVDMIKGVK--SL 135 (328)
Q Consensus 59 n~~TN~C~~~C~fCaf~~~~~~~~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~-~~~~e~i~~i~--~~ 135 (328)
T Consensus 2 ~~-~~gC~~~C~fC~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~i~~~-gg~p~~~~~~~~~~~~~~~~~~~~~~ 77 (165)
T pfam04055 2 II-TPGCNLRCTYCAFPSIR--ARGKGRELSPEEILEEAKELARLGVEVVILT-GGEPLLLPDLVELLERLLKLEELEGI 77 (165)
T ss_pred EE-CCCCCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE-CCCCCCCHHHHHHHHHHHHHCCCCCE
T ss_conf 88-93748779689997857--8886522699999999988874598599993-16766652777778887653146764
Q ss_pred CCCEEEECCCCCHHHHHHHHCCCCCEEEEECCCC-HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECC-CCCHHH
Q ss_conf 8832410256999999987415760697513437-77732058888989999999999987985577078668-989999
Q gi|254780485|r 136 GLETCMTLGMLSFEQAQILSKAGLDYYNHNIDTS-ERFYPHVTTTHTFEDRLQTLENVRKSGIKVCCGGILGL-GEMIDD 213 (328)
Q Consensus 136 ~~~i~~~~g~~~~~~~~~Lk~aG~~~~~~~let~-~~~~~~~~~~~~~~~~l~~~~~a~~~G~~~~sg~l~G~-gEt~ee 213 (328)
T Consensus 78 ~~~~~t~~~~~~~~~~~~l~~~g~~~i~~~ie~~~~~~~~~~~~~~~~~~~~~~i~~~~~~gi~~~~~~i~~~~~e~~~~ 157 (165)
T pfam04055 78 RITLETNGTLLDEELLEELKEAGLDRVSISLQSGDDEVLKIINRGHTFEEVLEALELLREAGIPVVVDNIVGLPGENDED 157 (165)
T ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHH
T ss_conf 89999851433104568999719852224635599999998579999899999999999879978899999799999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780485|r 214 RIDMLLT 220 (328)
Q Consensus 214 ri~~l~~ 220 (328)
T Consensus 158 ~~~~~~~ 164 (165)
T pfam04055 158 LEETLEL 164 (165)
T ss_pred HHHHHHH
T ss_conf 9999603