HHsearch alignment for GI: 254780486 and conserved domain: COG0001
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism].
Probab=100.00 E-value=2.3e-32 Score=221.84 Aligned_cols=338 Identities=16% Similarity=0.226 Sum_probs=239.5
Q ss_pred HHCCCEEEECCCCEEEECCCCC-CCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCE
Q ss_conf 9759839992897689803446-56677-98899999999998637868872244368858999999998401288-851
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHD-YLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF-EKM 93 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~d-YLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~-e~a 93 (381)
T Consensus 41 ~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~--G~~fg~------Pte~Ei~~Aell~~~~p~~e~v 112 (432)
T COG0001 41 RGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER--GLSFGA------PTELEVELAELLIERVPSIEKV 112 (432)
T ss_pred ECCCCEEEECCCCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHH--CCCCCC------CCHHHHHHHHHHHHHCCCCCEE
T ss_conf 45578699479987540130576500088987999999999972--677789------9778999999999865865089
Q ss_pred EEECCCCHHHHHHHH---HHCCCCCCCCHHHHCCHH---HHHHHH---------HCC-------CCCEEECCCCHHHHHH
Q ss_conf 674166024565566---631689710045420267---752666---------408-------7640305688147899
Q gi|254780486|r 94 LYFGSGYAANMAILS---TLPQATDLIVYDKLVHAS---IREGIN---------SGK-------AQAIAIPHNNINSFAE 151 (381)
Q Consensus 94 l~~~sG~~An~~~i~---~l~~~~d~ii~D~~~HaS---i~~g~~---------ls~-------a~~~~f~HnD~~~Le~ 151 (381)
T Consensus 113 rfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~ 192 (432)
T COG0001 113 RFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEE 192 (432)
T ss_pred EEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCHHHHHH
T ss_conf 98606408999999999876479759997288888711878426767555789999999734534478845799999999
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCC
Q ss_conf 764310002478607971462157661346----8999998631360898613112223477764011000013465210
Q gi|254780486|r 152 NINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVM 227 (381)
Q Consensus 152 ~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~ 227 (381)
T Consensus 193 ~~~~~----g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEVi-TGFR~~~g-Gaq~~~gi~PDlt-- 264 (432)
T COG0001 193 AFEEY----GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVI-TGFRVALG-GAQGYYGVEPDLT-- 264 (432)
T ss_pred HHHHC----CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCH-HHCCCCCC-CCCCCCCCCCCHH--
T ss_conf 99876----8967999954246788989898789999999999719489986221-20454776-4201008696333--
Q ss_pred CCCCCCCCC--EEEEEECCCCCCCCCCCCCCCEE-CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----H
Q ss_conf 013465653--02675245100100001211000-013577502578988789886271022478999999998-----7
Q gi|254780486|r 228 HSCSKALGS--SGALVGSNKIIYDYLINYAKPFI-YTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK-----I 299 (381)
Q Consensus 228 ~TlsKa~g~--~GG~i~~~~~ii~~l~~~~~~~i-fst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~-----~ 299 (381)
T Consensus 265 -tlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~ 343 (432)
T COG0001 265 -TLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAA 343 (432)
T ss_pred -HHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf -2224404775201125699999632778876456777886899999999999987365189999999999999999999
Q ss_pred HHCCCCC--CCCCCEEEEEECC-------------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 6417978--9989728999589-------------799999999999779189862288888887039996287899999
Q gi|254780486|r 300 ANKKIGF--SSQSHIQSIVIGD-------------NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPT 364 (381)
Q Consensus 300 ~~~~~g~--~~~s~I~~v~~gd-------------~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~ed 364 (381)
T Consensus 344 ~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~ea---------~flS~ahte~d 414 (432)
T COG0001 344 ERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFEA---------GFLSTAHTEED 414 (432)
T ss_pred HHHCCCEEEEEECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCC---------EEEECCCCHHH
T ss_conf 983998588620425899955899888999986356999999999996882347755554---------55200468999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999988738
Q gi|254780486|r 365 IVKLFDILPQIISEGN 380 (381)
Q Consensus 365 i~~~~~~l~~v~~E~~ 380 (381)
T Consensus 415 i~~~~~a~~~~~~~~~ 430 (432)
T COG0001 415 IDRTLEAADEAFKELA 430 (432)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999863