HHsearch alignment for GI: 254780486 and conserved domain: COG0403
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism].
Probab=98.72 E-value=2e-05 Score=53.91 Aligned_cols=319 Identities=14% Similarity=0.167 Sum_probs=162.2
Q ss_pred CCEEEECCCCCCCCCCCCHHHHH-HHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHH
Q ss_conf 97689803446566779889999-9999998637868--8722443688589999999984012888--51674166024
Q gi|254780486|r 28 RQDIWDFTSHDYLALSSSTLLRE-KILSSLDSKIPIG--SGGSRLLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAA 102 (381)
Q Consensus 28 ~~~~l~f~s~dYLGl~~~p~v~~-a~~~a~~~~~g~~--~~~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~A 102 (381)
T Consensus 73 N~~~~sfiG~GyY~~-~~P~vI~rnile~pe--wyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAa 149 (450)
T COG0403 73 NKVFTSFIGAGYYDT-YTPPVILRNILENPE--WYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAA 149 (450)
T ss_pred CCHHHHHCCCCCCCC-CCCHHHHHHHHCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 661454256864687-182788887643854--22367888636665799999989999999858874450023167699
Q ss_pred HHHHHHHH--CC-CCCCCCHHHHCCHHHHHHHH----HCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 56556663--16-89710045420267752666----4087640305688147899764310002478607971462157
Q gi|254780486|r 103 NMAILSTL--PQ-ATDLIVYDKLVHASIREGIN----SGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 103 n~~~i~~l--~~-~~d~ii~D~~~HaSi~~g~~----ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
T Consensus 150 AEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~-~~~------~~~gv~vQyP~-~ 221 (450)
T COG0403 150 AEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESA-DDG------DVFGVLVQYPN-T 221 (450)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHC-CCC------CEEEEEEECCC-C
T ss_conf 999999987414767349966886877999998611257639999564225566532-467------73799997688-8
Q ss_pred CC-CHHHHHHHHHHHHHCCEEEEEC-CCCCCCCCCCCCCEEEEEHHCCCCCCCCCC---CCCCCCCEE---EEEECCCCC
Q ss_conf 66-1346899999863136089861-311222347776401100001346521001---346565302---675245100
Q gi|254780486|r 176 DG-DKAPLDDLVKIANDYDGFIVVD-EAHATGVCGPLGKGLTHIIEERNNVIVMHS---CSKALGSSG---ALVGSNKII 247 (381)
Q Consensus 176 ~G-~~apL~~i~~l~~~y~~~LivD-Eah~~Gv~G~~G~G~~~~~~~~~~~iv~~T---lsKa~g~~G---G~i~~~~~i 247 (381)
T Consensus 222 ~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pP--------Ge~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~ 293 (450)
T COG0403 222 FGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPP--------GEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF 293 (450)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCC--------CCCCCCEEEECCCCCCCCCCCCCCCEEEEEEHHHH
T ss_conf 7734140999999986359779998263676455784--------10378669733760477767887563222375867
Q ss_pred CCCC----------------------------C-CCCCCEECCCCCCCCHHHHHHHHHHHHHHCC-CH---HHHHHHHHH
Q ss_conf 1000----------------------------0-1211000013577502578988789886271-02---247899999
Q gi|254780486|r 248 YDYL----------------------------I-NYAKPFIYTTSPSPILAVVACEALKLIKRKP-AL---HKSLLQLIN 294 (381)
Q Consensus 248 i~~l----------------------------~-~~~~~~ifst~l~P~~~aaa~aal~~l~~~~-~~---~~~l~~~~~ 294 (381)
T Consensus 294 ~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTn---QaLl-A~~As~y~~~hGp~GLk~iA~r~~~~a~ 369 (450)
T COG0403 294 KRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTN---QALL-ALAASMYAVYHGPQGLKEIAERIHRLAA 369 (450)
T ss_pred HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH---HHHH-HHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_conf 42599843304645899803201287788887640010155489---9999-9999999998696889999999999999
Q ss_pred HHH-HHHHCCCCCCC--CCCEEEEEECCH-HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 999-87641797899--897289995897-99999999999779189862288888887039996287899999999999
Q gi|254780486|r 295 ITD-KIANKKIGFSS--QSHIQSIVIGDN-KSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFD 370 (381)
Q Consensus 295 ~~~-~~~~~~~g~~~--~s~I~~v~~gd~-~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~ 370 (381)
T Consensus 370 ~la~~L~~~~~g~~~~~~~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~-------~~~~ia~tEt~t~~~i~~l~~ 442 (450)
T COG0403 370 YLAAGLKEIGAGVELVFDHFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDA-------DTVLIALTETTTKEDIDALVA 442 (450)
T ss_pred HHHHHHHHCCCCEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECC-------CCEEEEEECCCCHHHHHHHHH
T ss_conf 9999876458864751424220488864636799999999854974145448-------815999512567899999999
Q ss_pred HHHHHH
Q ss_conf 999998
Q gi|254780486|r 371 ILPQII 376 (381)
Q Consensus 371 ~l~~v~ 376 (381)
T Consensus 443 ~~~~~~ 448 (450)
T COG0403 443 AFGGVN 448 (450)
T ss_pred HHHHHC
T ss_conf 975331