HHsearch alignment for GI: 254780486 and conserved domain: COG1003
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism].
Probab=99.18 E-value=1.7e-08 Score=73.13 Aligned_cols=292 Identities=13% Similarity=0.210 Sum_probs=167.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEC-CCCHHH---HHHHHHHC-----CCCCCCCHHHHCCHHHHHHHHHCCCCCEE
Q ss_conf 3688589999999984012888516741-660245---65566631-----68971004542026775266640876403
Q gi|254780486|r 70 LCGNYNQHLELEEEAADFFGFEKMLYFG-SGYAAN---MAILSTLP-----QATDLIVYDKLVHASIREGINSGKAQAIA 140 (381)
Q Consensus 70 ~~G~~~~~~~lE~~lA~~~g~e~al~~~-sG~~An---~~~i~~l~-----~~~d~ii~D~~~HaSi~~g~~ls~a~~~~ 140 (381)
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~ 183 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVV 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEE
T ss_conf 89999999999999997409762640678776415678999999999758877767983165568986567654855999
Q ss_pred ECCC-----CHHHHHHHHHHHHHCCCCCCCEEEEC----CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 0568-----81478997643100024786079714----62157661346899999863136089861311222347776
Q gi|254780486|r 141 IPHN-----NINSFAENINKWRKSGGKGFPWIVVE----SIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLG 211 (381)
Q Consensus 141 f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~e----gv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G 211 (381)
T Consensus 184 V~~~~~G~VDlddLk~k~~~~~------AalMiTnPsT~GvF-----E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~r 252 (496)
T COG1003 184 VKCDENGNVDLDDLRAKAEDNL------AALMITNPSTLGVF-----EEDIREICEIVHEAGGQVYYDGANLNAIVGLAR 252 (496)
T ss_pred EECCCCCCCCHHHHHHHHCCCE------EEEEECCCCCCCCC-----HHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCC
T ss_conf 8328988716999998741311------58886168645450-----451999999999729989844754352522556
Q ss_pred CEEEEEHHCCCCCCCCCCCCCCCCC---EE----EEEECCCCCCCCCCC----CC-CCEECC--------CCCCCCHHH-
Q ss_conf 4011000013465210013465653---02----675245100100001----21-100001--------357750257-
Q gi|254780486|r 212 KGLTHIIEERNNVIVMHSCSKALGS---SG----ALVGSNKIIYDYLIN----YA-KPFIYT--------TSPSPILAV- 270 (381)
Q Consensus 212 ~G~~~~~~~~~~~iv~~TlsKa~g~---~G----G~i~~~~~ii~~l~~----~~-~~~ifs--------t~l~P~~~a- 270 (381)
T Consensus 253 PG------d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~ 326 (496)
T COG1003 253 PG------DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSAS 326 (496)
T ss_pred CC------CCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCH
T ss_conf 65------565635775223110258888999877602585512338987334777530036787764226514557616
Q ss_pred HHHHHHHHHHH--CCCHHH---HHHHHHHHHHHHHHCCCCC--CCCCCEE-EEEEC-------CHHHHHHHHHHHHHCCE
Q ss_conf 89887898862--710224---7899999999876417978--9989728-99958-------97999999999997791
Q gi|254780486|r 271 VACEALKLIKR--KPALHK---SLLQLINITDKIANKKIGF--SSQSHIQ-SIVIG-------DNKSCLNIAKNLQKKGF 335 (381)
Q Consensus 271 aa~aal~~l~~--~~~~~~---~l~~~~~~~~~~~~~~~g~--~~~s~I~-~v~~g-------d~~~a~~~~~~L~~~Gi 335 (381)
T Consensus 327 il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~Gf 406 (496)
T COG1003 327 ILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGF 406 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCC
T ss_conf 89999999998757788898999998479999975402755547887611589960566676429838999999872588
Q ss_pred EEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 898622888888870399962878999999999999999988738
Q gi|254780486|r 336 DIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 336 ~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
T Consensus 407 HaPT~~FPliV~~t--LMIEPTEsEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 407 HAPTMYFPLIVAGT--LMIEPTESESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred CCCCCCCCCCCCCC--EEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 88746575335650--45357777688999999999999999987