HHsearch alignment for GI: 254780486 and conserved domain: PRK03715

>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=100.00  E-value=4.3e-33  Score=226.40  Aligned_cols=333  Identities=17%  Similarity=0.263  Sum_probs=226.7

Q ss_pred             HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             9975983999289768980344---6566779889999999999863786887224436885899999999840128885
Q gi|254780486|r   16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEK   92 (381)
Q Consensus        16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~   92 (381)
T Consensus        23 ~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~Q~~~l~--~~--~~~~--~~~~~~~la~~L~~~~~~~~   95 (395)
T PRK03715         23 THGKGSWLYDHTGKRYLDFIQGWAVNCLGH-CNPGMVEALAAQAEKLI--NP--SPAF--YNEPMAKLAGLLTQHSCFDK   95 (395)
T ss_pred             EEEECCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHHHCC--CC--CCCC--CCHHHHHHHHHHHCCCCCCE
T ss_conf             983548899798799988231788777458-96999999999997547--67--7320--27899999999841558887


Q ss_pred             EEEECCCCHHHHHHHHHH--------CCCCCCCCHHHHCCHHHHHHHHHCCCC---------CEEEC---CCCHHHHHHH
Q ss_conf             167416602456556663--------168971004542026775266640876---------40305---6881478997
Q gi|254780486|r   93 MLYFGSGYAANMAILSTL--------PQATDLIVYDKLVHASIREGINSGKAQ---------AIAIP---HNNINSFAEN  152 (381)
Q Consensus        93 al~~~sG~~An~~~i~~l--------~~~~d~ii~D~~~HaSi~~g~~ls~a~---------~~~f~---HnD~~~Le~~  152 (381)
T Consensus        96 v~f~~sGsEAvE~AlKlAr~y~~~~~~gr~~ii~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~~~~~  175 (395)
T PRK03715         96 VFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKL  175 (395)
T ss_pred             EEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             99818758899999999999862468998459997578898740221046864445567898899675554558999973


Q ss_pred             HHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCCCCC
Q ss_conf             64310002478607971462157661346----89999986313608986131122234777640-11000013465210
Q gi|254780486|r  153 INKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNVIVM  227 (381)
Q Consensus       153 l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~iv~  227 (381)
T Consensus       176 ~~-------~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~~gv~PDiv--  244 (395)
T PRK03715        176 IT-------DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQ-TG-CGRTGTLFAYELAGIEPDIM--  244 (395)
T ss_pred             CC-------CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC-CC-CCCCCCCCCCCCCCCCCCEE--
T ss_conf             49-------980799993788877985298899999999995189735620110-38-88666853000489999989--


Q ss_pred             CCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-H---HH
Q ss_conf             01346565302---67524510010000121100001357750257898878988627102247899999999-8---76
Q gi|254780486|r  228 HSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD-K---IA  300 (381)
Q Consensus       228 ~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~---~~  300 (381)
T Consensus       245 -~~gKgl~g-G~Pl~av~~~~~i~~~-~~g~~g--~T~~gnpla~aaa~a~L~~i~~~~-l~~~~~~~g~~l~~~L~~l~  318 (395)
T PRK03715        245 -TLGKGIGG-GVPLAALLAKAEVAVF-EAGDQG--GTYNGNPLMTAVGYAVISQLVAPG-FLEGVRARGEYLKEKLLELS  318 (395)
T ss_pred             -EECCHHHC-CCCEEEEEECHHHCCC-CCCCCC--CCCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHH
T ss_conf             -97524428-9852899982674247-789888--798997189999999999996268-99999999999999999865


Q ss_pred             HCC--CCCCCCCCEEEEEECCH--HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             417--97899897289995897--99999999999779189862288888887039996287899999999999999998
Q gi|254780486|r  301 NKK--IGFSSQSHIQSIVIGDN--KSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII  376 (381)
Q Consensus       301 ~~~--~g~~~~s~I~~v~~gd~--~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~  376 (381)
T Consensus       319 ~~~~i~~vRG~Gl~~~iel~~~~~~~~~~~~~~~~~~gll~~~------~-~~n~irl~PpL~it~~eid~~~~~l~~aL  391 (395)
T PRK03715        319 AERGLEGERGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNA------P-RPNLLRFMPALNVTTDEIDQMIAMLRSVL  391 (395)
T ss_pred             CCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEC------C-CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             0399135743558999996788708999999999839989922------8-99989997994388999999999999999


Q ss_pred             HHH
Q ss_conf             873
Q gi|254780486|r  377 SEG  379 (381)
Q Consensus       377 ~E~  379 (381)
T Consensus       392 ~~l  394 (395)
T PRK03715        392 DKL  394 (395)
T ss_pred             HHH
T ss_conf             986