HHsearch alignment for GI: 254780486 and conserved domain: PRK04073

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional.
Probab=100.00  E-value=1.7e-34  Score=235.09  Aligned_cols=331  Identities=16%  Similarity=0.217  Sum_probs=233.0

Q ss_pred             HHHCCCEEEECCCCEEEECCCC-CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf             9975983999289768980344-656677-98899999999998637868872244368858999999998401288851
Q gi|254780486|r   16 IKSKGRHRQLLRRQDIWDFTSH-DYLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKM   93 (381)
Q Consensus        16 ~~~~g~~~~~~~~~~~l~f~s~-dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~a   93 (381)
T Consensus        27 ~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~-~~~---~~~~~--~~~~~~~~~e~l~~l~~~~~v  100 (396)
T PRK04073         27 SEAEGVWVKDPEGNKYMDMLSAYSAVNQGHRHPKIIQALKDQADK-VTL---TSRAF--HSDQLGPWYEKVAKLTGKDMV  100 (396)
T ss_pred             EEEECCEEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHH-CCC---CCCCC--CCHHHHHHHHHHHHHCCCCEE
T ss_conf             973659999898999999451788763037979999999999841-787---66532--434789999999975283648


Q ss_pred             EEECCCCHHHHHHHHHHC-----------CCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHHH
Q ss_conf             674166024565566631-----------6897100454202677526664087------------64030568814789
Q gi|254780486|r   94 LYFGSGYAANMAILSTLP-----------QATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSFA  150 (381)
Q Consensus        94 l~~~sG~~An~~~i~~l~-----------~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~Le  150 (381)
T Consensus       101 ~f~~sGseAvE~AlklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~p~~~~~~~~p~~d~~~l~  180 (396)
T PRK04073        101 LPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEAEYKRGFGPMLPGIKKIPYGDVEALK  180 (396)
T ss_pred             EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHH
T ss_conf             96187888999999999999876237888987799977750045320522267643345778999982325752166788


Q ss_pred             HHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCCC
Q ss_conf             9764310002478607971462157661346----89999986313608986131122234777640-110000134652
Q gi|254780486|r  151 ENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNVI  225 (381)
Q Consensus       151 ~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~i  225 (381)
T Consensus       181 ~~~~~-------~~AAvi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~~gv~PDiv  251 (396)
T PRK04073        181 AAITP-------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQ-TG-LGRTGKLFACDWDNVKPDMY  251 (396)
T ss_pred             HHCCC-------CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCE-EC-CCCCCCCCCEECCCCCCCEE
T ss_conf             61489-------75699998987778977899899999999999839935266341-07-88657630010046898801


Q ss_pred             CCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             1001346565302---6752451001000012110000135775025789887898862710224789999999987641
Q gi|254780486|r  226 VMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANK  302 (381)
Q Consensus       226 v~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~  302 (381)
T Consensus       252 ---~~gK~l~gG~~P~~av~~~~~i~~~~~~~~h~--~T~~gnpla~aaa~a~L~~~~~~~-l~~~~~~~g~~l~~~L-~  324 (396)
T PRK04073        252 ---ILGKALGGGVFPISCVAANRDILGVFTPGSHG--STFGGNPLACAVSIAALDVIEEEK-LPERSLELGEYFKEQL-K  324 (396)
T ss_pred             ---ECCCCCCCCCCCEEEEECCHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHH-H
T ss_conf             ---02534557877605896078999616689976--054889899999999999998757-9999999999999999-8


Q ss_pred             CCC------CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             797------89989728999589799999999999779189862288888887039996287899999999999999998
Q gi|254780486|r  303 KIG------FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII  376 (381)
Q Consensus       303 ~~g------~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~  376 (381)
T Consensus       325 ~l~~~~i~~vRG~Gl~~giel~~~--~~~~~~~~~~~Gll~~~~-------~~~~ir~~PpL~it~~eid~~l~~l~~~L  395 (396)
T PRK04073        325 EIDNPMIKEVRGRGLFIGVELNEP--ARPYCEALKEEGLLCKET-------HETVIRFAPPLVISKEELDWALEKIKAVL  395 (396)
T ss_pred             HCCCCCEEECCCCEEEEEEEECCC--HHHHHHHHHHCCEEEEEC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             258997487233779999995875--899999999499799527-------99989997993689999999999999985


Q ss_pred             H
Q ss_conf             8
Q gi|254780486|r  377 S  377 (381)
Q Consensus       377 ~  377 (381)
T Consensus       396 ~  396 (396)
T PRK04073        396 S  396 (396)
T ss_pred             C
T ss_conf             9