HHsearch alignment for GI: 254780486 and conserved domain: PRK04073
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional.
Probab=100.00 E-value=1.7e-34 Score=235.09 Aligned_cols=331 Identities=16% Similarity=0.217 Sum_probs=233.0
Q ss_pred HHHCCCEEEECCCCEEEECCCC-CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 9975983999289768980344-656677-98899999999998637868872244368858999999998401288851
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH-DYLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKM 93 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~-dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~a 93 (381)
T Consensus 27 ~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~-~~~---~~~~~--~~~~~~~~~e~l~~l~~~~~v 100 (396)
T PRK04073 27 SEAEGVWVKDPEGNKYMDMLSAYSAVNQGHRHPKIIQALKDQADK-VTL---TSRAF--HSDQLGPWYEKVAKLTGKDMV 100 (396)
T ss_pred EEEECCEEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHH-CCC---CCCCC--CCHHHHHHHHHHHHHCCCCEE
T ss_conf 973659999898999999451788763037979999999999841-787---66532--434789999999975283648
Q ss_pred EEECCCCHHHHHHHHHHC-----------CCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHHH
Q ss_conf 674166024565566631-----------6897100454202677526664087------------64030568814789
Q gi|254780486|r 94 LYFGSGYAANMAILSTLP-----------QATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSFA 150 (381)
Q Consensus 94 l~~~sG~~An~~~i~~l~-----------~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~Le 150 (381)
T Consensus 101 ~f~~sGseAvE~AlklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~p~~~~~~~~p~~d~~~l~ 180 (396)
T PRK04073 101 LPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEAEYKRGFGPMLPGIKKIPYGDVEALK 180 (396)
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHH
T ss_conf 96187888999999999999876237888987799977750045320522267643345778999982325752166788
Q ss_pred HHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCCC
Q ss_conf 9764310002478607971462157661346----89999986313608986131122234777640-110000134652
Q gi|254780486|r 151 ENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNVI 225 (381)
Q Consensus 151 ~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~i 225 (381)
T Consensus 181 ~~~~~-------~~AAvi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~~gv~PDiv 251 (396)
T PRK04073 181 AAITP-------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQ-TG-LGRTGKLFACDWDNVKPDMY 251 (396)
T ss_pred HHCCC-------CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCE-EC-CCCCCCCCCEECCCCCCCEE
T ss_conf 61489-------75699998987778977899899999999999839935266341-07-88657630010046898801
Q ss_pred CCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 1001346565302---6752451001000012110000135775025789887898862710224789999999987641
Q gi|254780486|r 226 VMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANK 302 (381)
Q Consensus 226 v~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~ 302 (381)
T Consensus 252 ---~~gK~l~gG~~P~~av~~~~~i~~~~~~~~h~--~T~~gnpla~aaa~a~L~~~~~~~-l~~~~~~~g~~l~~~L-~ 324 (396)
T PRK04073 252 ---ILGKALGGGVFPISCVAANRDILGVFTPGSHG--STFGGNPLACAVSIAALDVIEEEK-LPERSLELGEYFKEQL-K 324 (396)
T ss_pred ---ECCCCCCCCCCCEEEEECCHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHH-H
T ss_conf ---02534557877605896078999616689976--054889899999999999998757-9999999999999999-8
Q ss_pred CCC------CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 797------89989728999589799999999999779189862288888887039996287899999999999999998
Q gi|254780486|r 303 KIG------FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 303 ~~g------~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
T Consensus 325 ~l~~~~i~~vRG~Gl~~giel~~~--~~~~~~~~~~~Gll~~~~-------~~~~ir~~PpL~it~~eid~~l~~l~~~L 395 (396)
T PRK04073 325 EIDNPMIKEVRGRGLFIGVELNEP--ARPYCEALKEEGLLCKET-------HETVIRFAPPLVISKEELDWALEKIKAVL 395 (396)
T ss_pred HCCCCCEEECCCCEEEEEEEECCC--HHHHHHHHHHCCEEEEEC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 258997487233779999995875--899999999499799527-------99989997993689999999999999985
Q ss_pred H
Q ss_conf 8
Q gi|254780486|r 377 S 377 (381)
Q Consensus 377 ~ 377 (381)
T Consensus 396 ~ 396 (396)
T PRK04073 396 S 396 (396)
T ss_pred C
T ss_conf 9