HHsearch alignment for GI: 254780486 and conserved domain: PRK05968
>PRK05968 hypothetical protein; Provisional.
Probab=99.77 E-value=7.5e-17 Score=125.19 Aligned_cols=292 Identities=20% Similarity=0.180 Sum_probs=183.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCC-HH--HHHH-HHHCCCCC
Q ss_conf 88722443688589999999984012888516741660245655666316897100454202-67--7526-66408764
Q gi|254780486|r 63 GSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVH-AS--IREG-INSGKAQA 138 (381)
Q Consensus 63 ~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~H-aS--i~~g-~~ls~a~~ 138 (381)
T Consensus 54 g~~YsR~---~NPT~~~lE~~la~LEgg~~a~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~GI~v 130 (389)
T PRK05968 54 RPIYTRG---DNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAYRLFGTLLKRMGVEV 130 (389)
T ss_pred CCEEECC---CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEE
T ss_conf 9614289---8866999999999982996388854889999999999608999898588766758999998886078469
Q ss_pred EEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEH
Q ss_conf 03056881478997643100024786079714621576613468999998631360898613112223477764011000
Q gi|254780486|r 139 IAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHII 218 (381)
Q Consensus 139 ~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~ 218 (381)
T Consensus 131 ~~vd~~d~~~~~~~i-------~-~Tklv~~EtpsNP~l~v~DI~~ia~iA~~~g~~~vVDNTfatP~~-------~~Pl 195 (389)
T PRK05968 131 DYVDGRDEEAVAKAL-------P-GAKLLYLESPTSWVFELQDIAALAALAKRHGVVTVIDNSWASPVF-------QRPI 195 (389)
T ss_pred EEECCCCHHHHHHCC-------C-CCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-------CCHH
T ss_conf 996899999999627-------6-872899978999887273899999999983995999778611642-------5842
Q ss_pred HCCCCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHH
Q ss_conf 013465210013465653----0267524510010000121100001357750257898878988627102-24789999
Q gi|254780486|r 219 EERNNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLI 293 (381)
Q Consensus 219 ~~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~ 293 (381)
T Consensus 196 -~~GaDivvhS~TKyi~GHsDvl~G~v~~~~~~~~~~~~~~~~~-lG~~lsP~~a~l~lRGL~TL~lRm~rh~~nA~~vA 273 (389)
T PRK05968 196 -TLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPY-LGGKLSPFEAWLLLRGLRTLPLRMKAHEASALLIA 273 (389)
T ss_pred -HHCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH-CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf -4079879970453446898844269945699999999999986-27778858889998479869999999999999999
Q ss_pred HHHHHHHH-CCC---CC--------CCCCCEEEEEECCHHHHHHHHHHHH--HCCEEE----EEECCCCCC---------
Q ss_conf 99998764-179---78--------9989728999589799999999999--779189----862288888---------
Q gi|254780486|r 294 NITDKIAN-KKI---GF--------SSQSHIQSIVIGDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP--------- 346 (381)
Q Consensus 294 ~~~~~~~~-~~~---g~--------~~~s~I~~v~~gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp--------- 346 (381)
T Consensus 274 ~~L~~hp~V~~V~yPgL~shp~~~l~g~gg~~sf~l~~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~~~~~~~~~~~~~~ 353 (389)
T PRK05968 274 RRLKAHPVVETVCHPALANHPPAGLSGTSGLFSFIFREGVDVRRFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNS 353 (389)
T ss_pred HHHHHCCCCCEEECCCCCCCHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCCHHH
T ss_conf 99961999866338885223134217864379999577799999998488075631668643021870664167799889
Q ss_pred -----CCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf -----8870399962878999999999999999
Q gi|254780486|r 347 -----INTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 347 -----~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
T Consensus 354 ~~~~Gi~~~liRlSVGlEd~eDLi~Dl~qAL~~ 386 (389)
T PRK05968 354 AARFGISPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred HHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 986596949699993109999999999999998