HHsearch alignment for GI: 254780486 and conserved domain: PRK07366
>PRK07366 succinyldiaminopimelate transaminase; Validated.
Probab=99.87 E-value=4.6e-19 Score=138.98 Aligned_cols=341 Identities=12% Similarity=0.055 Sum_probs=192.0
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999999999759839992897689803446566779889999999999863786-8872244368858999999998401
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEEAADF 87 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~lA~~ 87 (381)
T Consensus 18 ~~~~~~~~~~--------~G~~vi~l~iG~-pdf~~P~~i~~a~~~a~~-~~~~~gY~~~~---G~~~lR~aIa~~~~~~ 84 (388)
T PRK07366 18 MDRAKAQARA--------AGKEVIDLSLGS-SDLPAPAHALEAIAQSLQ-DPSTHGYLLFH---GTLPFREAAAAWYEQR 84 (388)
T ss_pred HHHHHHHHHH--------CCCCEEECCCCC-CCCCCCHHHHHHHHHHHH-CCCCCCCCCCC---CCHHHHHHHHHHHHHH
T ss_conf 9999999985--------899849870868-999988999999999980-97676789875---7899999999999999
Q ss_pred CCCC----CEEEECCCC-HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CC----CHHHHHHHHHH
Q ss_conf 2888----516741660-245655666316897100454202677526664087640305---68----81478997643
Q gi|254780486|r 88 FGFE----KMLYFGSGY-AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HN----NINSFAENINK 155 (381)
Q Consensus 88 ~g~e----~al~~~sG~-~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---Hn----D~~~Le~~l~~ 155 (381)
T Consensus 85 ~g~~~~pe~~V~~t~G~~~al~~~~~al~~pGD~Vli~~P~Y~~y~~~~~~~G~~~~~vpl~~~~~~~~d~~~l~~~i~~ 164 (388)
T PRK07366 85 FGLAVDPETEVLPLIGSQEGTAHLPLALLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA 164 (388)
T ss_pred HCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 78988988739984788999999999966999989982587765189999859857997546667984799999874042
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCC-EEEEEHHCCCCCCCCCCC
Q ss_conf 100024786079714621576613---468999998631360898613112223477-764-011000013465210013
Q gi|254780486|r 156 WRKSGGKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGP-LGK-GLTHIIEERNNVIVMHSC 230 (381)
Q Consensus 156 ~~~~~~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~-G~~~~~~~~~~~iv~~Tl 230 (381)
T Consensus 165 ------~tk~iil~~P~NP-TG~v~s~~~l~~i~~~a~~~~i~lisDEiY~~l~~~~~~~~p~~~~~~~~~~~~i~~~S~ 237 (388)
T PRK07366 165 ------QARLMVLSYPHNP-TTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTL 237 (388)
T ss_pred ------CCCEEEECCCCCC-CCEEEEHHHHHHHHHHHHHCCEEEECCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEECC
T ss_conf ------2829998589898-466803888888999874055078622021445866876661354257220617997335
Q ss_pred CCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 46565302---67524510010000121100001357750257898878988627-102247899999999876417978
Q gi|254780486|r 231 SKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGF 306 (381)
Q Consensus 231 sKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~ 306 (381)
T Consensus 238 SK~f~~~G~RiG~~i~~~~li~~~~~~~~~~~~~--~~~~~~~~a~~al~~~~~~~~~~~~~~~~rr~~~~~~-L~~~g~ 314 (388)
T PRK07366 238 SKSYNMGGFRIGFAIGNAQLIAALRQIKAVVDFN--QYRGILNGAIAALTGPQACVQQTVQIFRQRRDAFINA-LHRIGW 314 (388)
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHCCC
T ss_conf 3257887651899967999999999998754765--4399999999999688899999999999999999999-997798
Q ss_pred CCCCC----EEEEEECCH--HHHHHHHHHHH-HCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99897----289995897--99999999999-7791898622-88888887039996287899999999999999998
Q gi|254780486|r 307 SSQSH----IQSIVIGDN--KSCLNIAKNLQ-KKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 307 ~~~s~----I~~v~~gd~--~~a~~~~~~L~-~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
T Consensus 315 ~~~~P~g~~y~w~~l~~~~~~~~~ef~~~Ll~~~gV~v~PG~~F--g~~g~g~iRl~~a--~~~~~l~eal~Rl~~~l 388 (388)
T PRK07366 315 PVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGF--GKSGEGYVRFALV--HDPDILEEAVERIAAFL 388 (388)
T ss_pred EEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHC
T ss_conf 75079857799787898788998999999998399999766465--8899986999962--99999999999999869