HHsearch alignment for GI: 254780486 and conserved domain: PRK13578
>PRK13578 ornithine decarboxylase; Provisional.
Probab=99.69 E-value=5.8e-14 Score=107.17 Aligned_cols=293 Identities=17% Similarity=0.177 Sum_probs=167.0
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCCCH-HHHHHHHHHCCCCCCCCHHHHCCHHHHHH-HHHCCCCCEEECC--C----
Q ss_conf 85899999999840128885167416602-45655666316897100454202677526-6640876403056--8----
Q gi|254780486|r 73 NYNQHLELEEEAADFFGFEKMLYFGSGYA-ANMAILSTLPQATDLIVYDKLVHASIREG-INSGKAQAIAIPH--N---- 144 (381)
Q Consensus 73 ~~~~~~~lE~~lA~~~g~e~al~~~sG~~-An~~~i~~l~~~~d~ii~D~~~HaSi~~g-~~ls~a~~~~f~H--n---- 144 (381)
T Consensus 172 h~G~~~eAq~~AA~~FGAD~TyFvvNGTS~~nk~v~~a~~~pGD~VLvdRN~HKSv~~GALIlsGA~PVYl~p~rN~~Gi 251 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGF 251 (720)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCE
T ss_conf 78844799999999849982699957710889999997458999999656435777778898669767996664675651
Q ss_pred ---------CHHHHHHHHHHHHHC---C-CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC-
Q ss_conf ---------814789976431000---2-47860797146215766134689999986313608986131122234777-
Q gi|254780486|r 145 ---------NINSFAENINKWRKS---G-GKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPL- 210 (381)
Q Consensus 145 ---------D~~~Le~~l~~~~~~---~-~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~- 210 (381)
T Consensus 252 iggI~~~~f~~~~i~~~I~~~~~~~a~~~~p~~~aVit~~TY--dGi~yn~~~I~~~i~~~~~~ilfDEAw~-~-~~~F~ 327 (720)
T PRK13578 252 IGGIDAHCFDEEYLREQIREVAPERADEARPFRLAIIQLGTY--DGTIYNARQVVDKIGHLCDYILFDSAWV-G-YEQFI 327 (720)
T ss_pred ECCCCHHHCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCC--CCEEECHHHHHHHHHHHCCEEEEECCHH-H-HHHCC
T ss_conf 167485752757789888743633312348861899946875--3542349999999864078389851102-1-44328
Q ss_pred --CCEE----EEEHHCCCCCCCCCCCCCCCCC--EEEEEECCCC-------CCCCCC-CCCCCEECCCCCCCCHHHHHHH
Q ss_conf --6401----1000013465210013465653--0267524510-------010000-1211000013577502578988
Q gi|254780486|r 211 --GKGL----THIIEERNNVIVMHSCSKALGS--SGALVGSNKI-------IYDYLI-NYAKPFIYTTSPSPILAVVACE 274 (381)
Q Consensus 211 --G~G~----~~~~~~~~~~iv~~TlsKa~g~--~GG~i~~~~~-------ii~~l~-~~~~~~ifst~l~P~~~aaa~a 274 (381)
T Consensus 328 P~~~d~~p~~l~~gaddp~i~vtQStHK~LaafSQaS~IHvkd~hI~g~~r~v~~~rfn~a~mmh~STSPsY~L~ASLDv 407 (720)
T PRK13578 328 PMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRFNNAFMLHASTSPFYPLFAALDV 407 (720)
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 53112464333458777650466306555443222210122454346665667889999999877078808999998799
Q ss_pred HHHHHHHC--CCH-HHHHHHHHHHHHHHHHC----------C--------------------C---------CCCC----
Q ss_conf 78988627--102-24789999999987641----------7--------------------9---------7899----
Q gi|254780486|r 275 ALKLIKRK--PAL-HKSLLQLINITDKIANK----------K--------------------I---------GFSS---- 308 (381)
Q Consensus 275 al~~l~~~--~~~-~~~l~~~~~~~~~~~~~----------~--------------------~---------g~~~---- 308 (381)
T Consensus 408 ~A~m~~g~~G~~L~~e~i~~aie~Rk~il~~~~~~k~~~p~~v~g~~~~~~~~e~l~~d~~~w~~~Pg~~WHGf~g~~~~ 487 (720)
T PRK13578 408 NAKMHEGESGRRLWMDCVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAED 487 (720)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCC
T ss_conf 99997312145899999999999999998654442255752126860354888886125010246887422465555766
Q ss_pred ---CCCEEE-EEEC----C-------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf ---897289-9958----9-------799999999999779189862288888887039996287899999999999999
Q gi|254780486|r 309 ---QSHIQS-IVIG----D-------NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 309 ---~s~I~~-v~~g----d-------~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~ 373 (381)
T Consensus 488 ~~~lDP~Klti~tPGi~~~~g~~~~~GIpA~il~~yLre~gIvvEktd-----l~--~ILfL~T~G~t~~k~~~Lv~aL~ 560 (720)
T PRK13578 488 QYFVDPCKLLLTTPGIDAETGEYEDFGVPATILANYLRENGIVPEKCD-----LN--SILFLLTPAEDMAKLQQLVAMLA 560 (720)
T ss_pred CEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECC-----CC--EEEEEECCCCCHHHHHHHHHHHH
T ss_conf 342267379985367455665421368758999999987690798547-----75--07999726788899999999999
Q ss_pred HHH
Q ss_conf 998
Q gi|254780486|r 374 QII 376 (381)
Q Consensus 374 ~v~ 376 (381)
T Consensus 561 ~fe 563 (720)
T PRK13578 561 RFE 563 (720)
T ss_pred HHH
T ss_conf 999