HHsearch alignment for GI: 254780486 and conserved domain: TIGR01977

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=99.69  E-value=1.9e-14  Score=110.24  Aligned_cols=310  Identities=20%  Similarity=0.220  Sum_probs=188.3

Q ss_pred             CHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE---EEECCCCHH-HHHHHHHHCC--CCCC
Q ss_conf             889999999999863786--8872244368858999999998401288851---674166024-5655666316--8971
Q gi|254780486|r   45 STLLREKILSSLDSKIPI--GSGGSRLLCGNYNQHLELEEEAADFFGFEKM---LYFGSGYAA-NMAILSTLPQ--ATDL  116 (381)
Q Consensus        45 ~p~v~~a~~~a~~~~~g~--~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~a---l~~~sG~~A-n~~~i~~l~~--~~d~  116 (381)
T Consensus        13 P~ev~~a~~~~~~-~~gg~~gRG~~~~~l~~~~~v~EtR~~lA~Lf~~~~~~~v~Ft~nAT~aLN~~L~Gl~lknr~g~h   91 (384)
T TIGR01977        13 PDEVYEAMADFLK-NYGGSPGRGRYRLALRASREVEETRELLAKLFNAPSKAHVVFTNNATTALNIALKGLILKNREGDH   91 (384)
T ss_pred             HHHHHHHHHHHHH-HCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCC
T ss_conf             3899999999987-348756888750345414228899999999848897462784060779999998433000559996


Q ss_pred             CCHHHHCCHHHHHHHH-HC----CCCCEEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCC-CCCCHHHHHHH
Q ss_conf             0045420267752666-40----876403056-----8814789976431000247860797146215-76613468999
Q gi|254780486|r  117 IVYDKLVHASIREGIN-SG----KAQAIAIPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYS-MDGDKAPLDDL  185 (381)
Q Consensus       117 ii~D~~~HaSi~~g~~-ls----~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~S-m~G~~apL~~i  185 (381)
T Consensus        92 Vi~t~mEHNsV~RPL~~L~~~~~g~~~~iv~~~~~G~~~~e~i~~~~~~~-----k-Tk~iv~~-HaSNV~G~ilpiEEI  164 (384)
T TIGR01977        92 VITTPMEHNSVLRPLEKLKEERIGVEITIVKCDNEGLISPERIKRAIKKN-----K-TKLIVVS-HASNVTGTILPIEEI  164 (384)
T ss_pred             EEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCC-----C-CCEEEEE-CHHHHCCCCCCHHHH
T ss_conf             78647602366438999973599758998627888521679999853378-----8-3004322-003010311257899


Q ss_pred             H-HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC-CC-CCCCCCCCCCC-CC--EEEEEECCCCC--CCCCCCCCCC
Q ss_conf             9-98631360898613112223477764011000013-46-52100134656-53--02675245100--1000012110
Q gi|254780486|r  186 V-KIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER-NN-VIVMHSCSKAL-GS--SGALVGSNKII--YDYLINYAKP  257 (381)
Q Consensus       186 ~-~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~-~~-~iv~~TlsKa~-g~--~GG~i~~~~~i--i~~l~~~~~~  257 (381)
T Consensus       165 gR~lA~e~g~~~~~DAaQtAGv~~---------Id~~~~~i~~lAF~GHKgLlGP~GtGGl~~~e~~~~~l~pl~-~GGT  234 (384)
T TIGR01977       165 GRELAKENGIFFILDAAQTAGVIP---------IDMEELAIDMLAFTGHKGLLGPQGTGGLIIKEGIKEILKPLK-SGGT  234 (384)
T ss_pred             HHHHHHHCCCEEEEECCCCCCCCH---------HCCCHHHCCEEEECCCHHHHCCCCCEEEEEECCHHHHHHHHC-CCCC
T ss_conf             999998679739983200037541---------010322067676377522001136315788737056745320-6887


Q ss_pred             -E-------------EC-CCCCCCCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCC-----CC---CCCCCCE
Q ss_conf             -0-------------00-13577502578988789886271--02247899999999876417-----97---8998972
Q gi|254780486|r  258 -F-------------IY-TTSPSPILAVVACEALKLIKRKP--ALHKSLLQLINITDKIANKK-----IG---FSSQSHI  312 (381)
Q Consensus       258 -~-------------if-st~l~P~~~aaa~aal~~l~~~~--~~~~~l~~~~~~~~~~~~~~-----~g---~~~~s~I  312 (381)
T Consensus       235 Gs~S~~~~~P~~~PdrfE~GTLN~pGI~gL~agik~~~~~gi~~i~~kE~~l~~~l~~~L~~~~~V~iyG~~d~~~~~~v  314 (384)
T TIGR01977       235 GSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKELKLTEKLLNGLKEIKKVKIYGPKDPAKRVGV  314 (384)
T ss_pred             CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCE
T ss_conf             54534445776043201144003799999988878875644778999999999999874016780676277034332675


Q ss_pred             EEEEECCHHHHHHHHHHHHHCC-EEEEEEC--CC-------CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             8999589799999999999779-1898622--88-------88888703999628789999999999999999
Q gi|254780486|r  313 QSIVIGDNKSCLNIAKNLQKKG-FDIRAIR--PP-------TVPINTARLRISITLNVDEPTIVKLFDILPQI  375 (381)
Q Consensus       313 ~~v~~gd~~~a~~~~~~L~~~G-i~v~~i~--~P-------tVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v  375 (381)
T Consensus       315 vSf~~~-g~d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt--~R~S~gyFnt~ee~~~l~~al~~i  384 (384)
T TIGR01977       315 VSFTVE-GIDSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGT--IRLSLGYFNTEEEIEKLVEALSEI  384 (384)
T ss_pred             EEEEEC-CCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCE--EEEECCCCCCHHHHHHHHHHHHCC
T ss_conf             899834-8887789999986189189767666412303531167653--887278778889999999998509