HHsearch alignment for GI: 254780486 and conserved domain: pfam00464
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=99.82 E-value=5.4e-18 Score=132.32 Aligned_cols=318 Identities=18% Similarity=0.233 Sum_probs=194.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH----HHHHHCCCCCEEEEC-CCCHHHHHHHH
Q ss_conf 0344656677988999999999986378688722443688589999999----984012888516741-66024565566
Q gi|254780486|r 34 FTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEE----EAADFFGFEKMLYFG-SGYAANMAILS 108 (381)
Q Consensus 34 f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~----~lA~~~g~e~al~~~-sG~~An~~~i~ 108 (381)
T Consensus 26 IASEN~----~S~~v~~a~gS~ltnkYaEG~pg~Ryy~G~-e~iD~iE~la~~rak~lF~a~~anVqp~SGs~An~av~~ 100 (380)
T pfam00464 26 IASENF----TSRAVMEALGSVLTNKYAEGYPGKRYYGGC-EYVDEVETLAQDRAKELFGLDGVNVQPLSGSQANLAVYT 100 (380)
T ss_pred ECCCCC----CCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 537775----799999985573126465879984334676-359999999999999983997635177876999999999
Q ss_pred HHCCCCCCCCHHHH------CCHHHHHHHHHCCC--CCEEECC------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 63168971004542------02677526664087--6403056------8814789976431000247860797146215
Q gi|254780486|r 109 TLPQATDLIVYDKL------VHASIREGINSGKA--QAIAIPH------NNINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 109 ~l~~~~d~ii~D~~------~HaSi~~g~~ls~a--~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
T Consensus 101 all~PGD~il~l~l~~GGHltHg~~---~~~~g~~~~~~~Y~~d~~~~~ID~d~l~~~a~~~kP-----klIi~G~Say~ 172 (380)
T pfam00464 101 ALLNPGDRIMGLDLPHGGHLTHGYP---VNFSGKFFESMPYGVDPDTGLIDYDQLEKNAKLFKP-----KLIVAGTSAYS 172 (380)
T ss_pred HHHCCCCEEEECCCCCCCCCCCCCC---CCEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC-----CEEEECCCCCC
T ss_conf 9837999899536777754567986---562011467787434645486689999999997099-----88998740043
Q ss_pred CCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC-CCEEEEEECCC---CCCCC
Q ss_conf 766134689999986313608986131122234777640110000134652100134656-53026752451---00100
Q gi|254780486|r 175 MDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL-GSSGALVGSNK---IIYDY 250 (381)
Q Consensus 175 m~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~-g~~GG~i~~~~---~ii~~ 250 (381)
T Consensus 173 r---~~d~~~~reIad~vgA~l~~D~aH~~GLI-A~g--~-~p~Pl~~ADvvt~tTHKTlrGPrGGiIl~~~~~~e~~~k 245 (380)
T pfam00464 173 R---LIDYARFREIADEVGAYLMVDMAHIAGLV-AAG--V-IPSPFPYAHVVTTTTHKTLRGPRGGMIFFREILYELEKK 245 (380)
T ss_pred C---CCCHHHHHHHHHHCCCEEEEEHHHHHHHH-HCC--C-CCCCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHH
T ss_conf 6---44889999999750988998637777777-424--3-799546665785354566789985179837837999999
Q ss_pred CCCCCCCEECCCCCCCCHHHHHHHHH-HHHHHC-CCHHHHHHHHHHHHHH-HHHCCCCC---CCCCCEEEEEECCH-HHH
Q ss_conf 00121100001357750257898878-988627-1022478999999998-76417978---99897289995897-999
Q gi|254780486|r 251 LINYAKPFIYTTSPSPILAVVACEAL-KLIKRK-PALHKSLLQLINITDK-IANKKIGF---SSQSHIQSIVIGDN-KSC 323 (381)
Q Consensus 251 l~~~~~~~ifst~l~P~~~aaa~aal-~~l~~~-~~~~~~l~~~~~~~~~-~~~~~~g~---~~~s~I~~v~~gd~-~~a 323 (381)
T Consensus 246 Id~avFPg~qggp~~-h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~G~~vv~ggTd~H~vlvdl~~~g~~G 324 (380)
T pfam00464 246 INSAVFPGLQGGPLN-HVIAAKAVALKQALTPEFKVYQQQVLKNAKALAEALKERGYKLVSGGTDNHLVLVDLRPKGLDG 324 (380)
T ss_pred HCCCCCCCCCCCHHH-HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECCCCCCCH
T ss_conf 714048876677006-5799999999998485299999999999999999999788835779998768999776669999
Q ss_pred HHHHHHHHHCCEEEEEECCC---CCCCCCCEEEEEC----CCCCCHHHHHHHHHHH
Q ss_conf 99999999779189862288---8888870399962----8789999999999999
Q gi|254780486|r 324 LNIAKNLQKKGFDIRAIRPP---TVPINTARLRISI----TLNVDEPTIVKLFDIL 372 (381)
Q Consensus 324 ~~~~~~L~~~Gi~v~~i~~P---tVp~~~~rlRi~v----~a~~t~edi~~~~~~l 372 (381)
T Consensus 325 ~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGt~~~T~rG~~e~em~~ia~~I 380 (380)
T pfam00464 325 KRAEKALERANITANKNTIPGDPKSPFVTSGLRLGTPALTSRGFGEADFEEVAGYI 380 (380)
T ss_pred HHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHC
T ss_conf 99999999769287888598999999888842657778983899889999999659