HHsearch alignment for GI: 254780487 and conserved domain: CHL00072
>CHL00072 chlL photochlorophyllide reductase subunit L.
Probab=98.81 E-value=8.9e-08 Score=68.13 Aligned_cols=175 Identities=17% Similarity=0.217 Sum_probs=102.6
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC----CCHHHHH-----
Q ss_conf 2999835898747999999999984048612013887380689999985578731144300145----1034788-----
Q gi|254780487|r 4 RLVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMYEETDSKTIHRIGRIPKSHIIPEKWKLR----TPASPHL----- 74 (217)
Q Consensus 4 ~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----- 74 (217)
T Consensus 2 ~iaiyGKG-GIGKSTtsaNlsaaLA~~GkkVl~IGcDpk~DsT~~L--~g~~~~-tvld~l~~~~~~~~~~~~edvi~~G 77 (271)
T CHL00072 2 KIAVYGKG-GIGKSTTSCNISIALARRGKKVLQIGCDPKHDSTFTL--TGFLIP-TIIDTLQSKDYHYEDVWPEDVIYKG 77 (271)
T ss_pred EEEEECCC-CCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH--CCCCCC-CHHHHHHHHCCCCCCCCHHHHHHCC
T ss_conf 69997898-5448588999999999879979997899737777400--699888-5999997537873216499998527
Q ss_pred --------------HHHHHHCCCHHHHH---H--HHHHCCEEEEECCCCCCCC-CCCCCCHHHHHHHHCCCEEEEECCCC
Q ss_conf --------------99985023507886---4--2232887999227655566-76753089999974794489705776
Q gi|254780487|r 75 --------------AAEIDGVIIDPATI---N--PPDINDSIIIEGIGGLLVP-LTTEYLFIDLIERWQFPIILCARTSL 134 (217)
Q Consensus 75 --------------~~~~~~~~i~~~~~---~--~~~~~D~viIEGagg~~~~-~~~~~~~~dla~~l~~~vILV~~~~~ 134 (217)
T Consensus 78 ~~gi~cvEaGGPepGvGCaGrgi~~~i~lL~~l~~~~d~D~V~yDvlgDVVCGGFa~Pi~~Ad-------~~~iVts~e~ 150 (271)
T CHL00072 78 YGGVDCVEAGGPPAGAGCGGYVVGETVKLLKELNAFYEYDVILFDVLGDVVCGGFAAPLNYAD-------YCIIITDNGF 150 (271)
T ss_pred CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC-------EEEEEECCCH
T ss_conf 788466543899988777886519999999973762138889994477655654567500088-------8999956708
Q ss_pred CHHHHH---HHHHHHH-HHCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 504579---9999999-847990799997697780059999986199899994788888
Q gi|254780487|r 135 GTINHS---LLSLETL-RNRNINIIGIAFIGDSMPKVEETIVKIGRIPHLGRLPKIDPI 189 (217)
Q Consensus 135 g~i~~~---~l~~~~~-~~~g~~i~GiIlN~~~~~~~~~~le~~~~ipvLG~iP~~~~~ 189 (217)
T Consensus 151 malyaANnI~~~i~~~a~~~~~rl~GiI~N~~~~~~~v~~fa~~~g~~~i~~iPrd~~V 209 (271)
T CHL00072 151 DALFAANRIAASVREKARTHPLRLAGLVGNRTSKRDLIDKYVEACPMPVLEVLPLIEDI 209 (271)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCHH
T ss_conf 89999999999999973046864443652268837899999997399669856871166