HHsearch alignment for GI: 254780487 and conserved domain: COG0455
>COG0455 flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility].
Probab=98.77 E-value=2.1e-07 Score=65.75 Aligned_cols=180 Identities=16% Similarity=0.113 Sum_probs=109.2
Q ss_pred CCCEEEEECCCCCCCHHHHHHHH-HHHHHCCCCCCEE------CCC-----CCCCHHHHHHHHHCCCCCCCCCCCC----
Q ss_conf 98329998358987479999999-9998404861201------388-----7380689999985578731144300----
Q gi|254780487|r 1 MKLRLVIVGTDTSVGKTIFASAL-VHALNAYYWKPIQ------SGM-----YEETDSKTIHRIGRIPKSHIIPEKW---- 64 (217)
Q Consensus 1 M~~~i~I~GT~t~vGKT~vs~~L-~~~l~~~~~KPv~------~G~-----~~~~D~~~~~~~~~~~~~~~~~~~~---- 64 (217)
T Consensus 1 ~~~~Iav~SgKGGvGKTtitanlga~~~~~~~k~V~~iDaD~g~~nL~~~~g~~~~~~~l~dvL~~~~~~~Di~~~~~~~ 80 (262)
T COG0455 1 MTKVIAVVSGKGGVGKTTITANLGAALAALGGKVVLLIDADLGLGNLSLLLGVESKPTTLHDVLAGEASIEDIIYETPQD 80 (262)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHCCCCHHHEEEECCCC
T ss_conf 97899998458875689899869999996489769999658888728888588888550999970778776802315768
Q ss_pred ---CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHH
Q ss_conf ---14510347889998502350788642232887999227655566767530899999747944897057765045799
Q gi|254780487|r 65 ---KLRTPASPHLAAEIDGVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTSLGTINHSL 141 (217)
Q Consensus 65 ---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~~g~i~~~~ 141 (217)
T Consensus 81 gl~vipg~~~~~~~~~~~~~~~~~~~~~l~~~~D~iliD~~aGl~~~~~~~~~~sd-------~~viVt~pe~~si~~A~ 153 (262)
T COG0455 81 GLYVLPGGSGLEDLAKLDPEDLEDVIKELEELYDYILIDTGAGLSRDTLSFILSSD-------ELVIVTTPEPTSITDAY 153 (262)
T ss_pred CEEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCC-------CEEEEECCCCCHHHHHH
T ss_conf 98996078876888616988899999998752999999689996688899987368-------17999279852089999
Q ss_pred HHHHHHHHCCCEEEE--EEECCCCCC-CH----HHHHHHHCCCCEEEEECCCC
Q ss_conf 999999847990799--997697780-05----99999861998999947888
Q gi|254780487|r 142 LSLETLRNRNINIIG--IAFIGDSMP-KV----EETIVKIGRIPHLGRLPKID 187 (217)
Q Consensus 142 l~~~~~~~~g~~i~G--iIlN~~~~~-~~----~~~le~~~~ipvLG~iP~~~ 187 (217)
T Consensus 154 ~~i~~~~~~~~~~~~~~vV~N~v~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~ 206 (262)
T COG0455 154 KTIKILSKLGLDLLGRRVVLNRVRSTKEGVDVAALLIQVVKQVPVLQVIPFDP 206 (262)
T ss_pred HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCH
T ss_conf 99999997387643315899703666654678999999997077434715675