HHsearch alignment for GI: 254780487 and conserved domain: COG0455

>COG0455 flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility].
Probab=98.77  E-value=2.1e-07  Score=65.75  Aligned_cols=180  Identities=16%  Similarity=0.113  Sum_probs=109.2

Q ss_pred             CCCEEEEECCCCCCCHHHHHHHH-HHHHHCCCCCCEE------CCC-----CCCCHHHHHHHHHCCCCCCCCCCCC----
Q ss_conf             98329998358987479999999-9998404861201------388-----7380689999985578731144300----
Q gi|254780487|r    1 MKLRLVIVGTDTSVGKTIFASAL-VHALNAYYWKPIQ------SGM-----YEETDSKTIHRIGRIPKSHIIPEKW----   64 (217)
Q Consensus         1 M~~~i~I~GT~t~vGKT~vs~~L-~~~l~~~~~KPv~------~G~-----~~~~D~~~~~~~~~~~~~~~~~~~~----   64 (217)
T Consensus         1 ~~~~Iav~SgKGGvGKTtitanlga~~~~~~~k~V~~iDaD~g~~nL~~~~g~~~~~~~l~dvL~~~~~~~Di~~~~~~~   80 (262)
T COG0455           1 MTKVIAVVSGKGGVGKTTITANLGAALAALGGKVVLLIDADLGLGNLSLLLGVESKPTTLHDVLAGEASIEDIIYETPQD   80 (262)
T ss_pred             CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHCCCCHHHEEEECCCC
T ss_conf             97899998458875689899869999996489769999658888728888588888550999970778776802315768


Q ss_pred             ---CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHH
Q ss_conf             ---14510347889998502350788642232887999227655566767530899999747944897057765045799
Q gi|254780487|r   65 ---KLRTPASPHLAAEIDGVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTSLGTINHSL  141 (217)
Q Consensus        65 ---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~~g~i~~~~  141 (217)
T Consensus        81 gl~vipg~~~~~~~~~~~~~~~~~~~~~l~~~~D~iliD~~aGl~~~~~~~~~~sd-------~~viVt~pe~~si~~A~  153 (262)
T COG0455          81 GLYVLPGGSGLEDLAKLDPEDLEDVIKELEELYDYILIDTGAGLSRDTLSFILSSD-------ELVIVTTPEPTSITDAY  153 (262)
T ss_pred             CEEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCC-------CEEEEECCCCCHHHHHH
T ss_conf             98996078876888616988899999998752999999689996688899987368-------17999279852089999


Q ss_pred             HHHHHHHHCCCEEEE--EEECCCCCC-CH----HHHHHHHCCCCEEEEECCCC
Q ss_conf             999999847990799--997697780-05----99999861998999947888
Q gi|254780487|r  142 LSLETLRNRNINIIG--IAFIGDSMP-KV----EETIVKIGRIPHLGRLPKID  187 (217)
Q Consensus       142 l~~~~~~~~g~~i~G--iIlN~~~~~-~~----~~~le~~~~ipvLG~iP~~~  187 (217)
T Consensus       154 ~~i~~~~~~~~~~~~~~vV~N~v~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~  206 (262)
T COG0455         154 KTIKILSKLGLDLLGRRVVLNRVRSTKEGVDVAALLIQVVKQVPVLQVIPFDP  206 (262)
T ss_pred             HHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCH
T ss_conf             99999997387643315899703666654678999999997077434715675