HHsearch alignment for GI: 254780487 and conserved domain: COG2805
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=92.55 E-value=0.32 Score=27.03 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=24.6
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 299983589874799999999998404861201
Q gi|254780487|r 4 RLVIVGTDTSVGKTIFASALVHALNAYYWKPIQ 36 (217)
Q Consensus 4 ~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~ 36 (217)
T Consensus 127 LILVTGp-TGSGKSTTlAamId~iN~~~~~HIl 158 (353)
T COG2805 127 LILVTGP-TGSGKSTTLAAMIDYINKHKAKHIL 158 (353)
T ss_pred EEEEECC-CCCCHHHHHHHHHHHHHCCCCCCEE
T ss_conf 6998679-9996787999999998414775168