HHsearch alignment for GI: 254780487 and conserved domain: COG3367
>COG3367 Uncharacterized conserved protein [Function unknown].
Probab=98.42 E-value=6.7e-06 Score=56.38 Aligned_cols=161 Identities=19% Similarity=0.179 Sum_probs=87.4
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCE--ECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 8329998358987479999999999840486120--13887380689999985578731144300145103478899985
Q gi|254780487|r 2 KLRLVIVGTDTSVGKTIFASALVHALNAYYWKPI--QSGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAAEID 79 (217)
Q Consensus 2 ~~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv--~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (217)
T Consensus 148 a~~V~vvGTd~~vGKrTTa~~L~~~~~e~G~~a~fvaTgqtg-----il~--~----~~----gvvvdav~~DfaAGave 212 (339)
T COG3367 148 AKVVLVVGTDCAVGKRTTALELREAAREEGIKAGFVATGQTG-----ILI--A----DD----GVVVDAVVMDFAAGAVE 212 (339)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCEE-----EEE--E----CC----CEEECCHHHHHHHHHHH
T ss_conf 768999335632104388999999999709863157607604-----688--5----27----46753036888988888
Q ss_pred HCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEE-EEECCCCC----------HHHHHHHHHHHHH
Q ss_conf 023507886422328879992276555667675308999997479448-97057765----------0457999999998
Q gi|254780487|r 80 GVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPII-LCARTSLG----------TINHSLLSLETLR 148 (217)
Q Consensus 80 ~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vI-LV~~~~~g----------~i~~~~l~~~~~~ 148 (217)
T Consensus 213 ~----~v~~~~e~~~Dii~VEGQgsl~HP~y-~vtl~-il~gs~PDavvL~H~P~r~~~~g~P~~ip~leevi~l~e~l- 285 (339)
T COG3367 213 S----AVYEAEEKNPDIIFVEGQGSLTHPAY-GVTLG-ILHGSAPDAVVLCHDPNRKYRDGFPEPIPPLEEVIALYELL- 285 (339)
T ss_pred H----HHHHHHHCCCCEEEEECCCCCCCCCC-CCCHH-HHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHC-
T ss_conf 8----88876522898799906534347776-52143-30477897699974699752367987689889988999871-
Q ss_pred HCCCEEEEEEECCCC--CCCHHHHH---HHHCCCCEEEEECC
Q ss_conf 479907999976977--80059999---98619989999478
Q gi|254780487|r 149 NRNINIIGIAFIGDS--MPKVEETI---VKIGRIPHLGRLPK 185 (217)
Q Consensus 149 ~~g~~i~GiIlN~~~--~~~~~~~l---e~~~~ipvLG~iP~ 185 (217)
T Consensus 286 -~~a~Vvgi~lNtr~~dE~~are~~a~l~~efglP~~Dp~~~ 326 (339)
T COG3367 286 -SNAKVVGIALNTRNLDEEEARELCAKLEAEFGLPVTDPLRF 326 (339)
T ss_pred -CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf -67857999924444686889999999864039742263002