HHsearch alignment for GI: 254780487 and conserved domain: PRK09302

>PRK09302 circadian clock protein KaiC; Reviewed.

Probab=90.53  E-value=1.3  Score=23.26  Aligned_cols=20  Identities=35%  Similarity=0.630  Sum_probs=10.2

Q ss_pred             EEEEECCCCCCCHHHHHHHHH
Q ss_conf             299983589874799999999
Q gi|254780487|r    4 RLVIVGTDTSVGKTIFASALV   24 (217)
Q Consensus         4 ~i~I~GT~t~vGKT~vs~~L~   24 (217)
T Consensus        26 ~~LV~G~-pGsGKTtla~QfL   45 (501)
T PRK09302         26 PTLVSGT-AGTGKTLFALQFL   45 (501)
T ss_pred             EEEEEEC-CCCCHHHHHHHHH
T ss_conf             7999838-9999999999999