HHsearch alignment for GI: 254780487 and conserved domain: PRK13233
>PRK13233 nifH nitrogenase reductase; Reviewed.
Probab=99.11 E-value=3.8e-09 Score=76.70 Aligned_cols=181 Identities=13% Similarity=0.047 Sum_probs=101.8
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHC-CCCCCEECCCCCCCHHHHHHH----------HHC----CCCCCCCCCCCC
Q ss_conf 98329998358987479999999999840-486120138873806899999----------855----787311443001
Q gi|254780487|r 1 MKLRLVIVGTDTSVGKTIFASALVHALNA-YYWKPIQSGMYEETDSKTIHR----------IGR----IPKSHIIPEKWK 65 (217)
Q Consensus 1 M~~~i~I~GT~t~vGKT~vs~~L~~~l~~-~~~KPv~~G~~~~~D~~~~~~----------~~~----~~~~~~~~~~~~ 65 (217)
T Consensus 1 m~~~iaiyG-KGGIGKSTTt~NLaaALA~l~GkrVl~IgcDPk~dST~~l~g~~~~~tv~d~l~~~~~~~~~~e~ii~~g 79 (275)
T PRK13233 1 MTRKIAIYG-KGGIGKSTTTQNTAAAMAHFHDKKVFIHGCDPKADSTRLILGGKPQTTMMDTLRELGEEKVTPDKVIKTG 79 (275)
T ss_pred CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHCC
T ss_conf 973899989-9854465459999999996479889997978876136776089878839999986288755388887537
Q ss_pred CCCCH-----HHHHHHHHHHCCCH------HHHHHHHHHCCEEEEECCCCCCCCCCCC---CCHHHHHHHHCCCEEEEEC
Q ss_conf 45103-----47889998502350------7886422328879992276555667675---3089999974794489705
Q gi|254780487|r 66 LRTPA-----SPHLAAEIDGVIID------PATINPPDINDSIIIEGIGGLLVPLTTE---YLFIDLIERWQFPIILCAR 131 (217)
Q Consensus 66 ~~~~~-----~~~~~~~~~~~~i~------~~~~~~~~~~D~viIEGagg~~~~~~~~---~~~~dla~~l~~~vILV~~ 131 (217)
T Consensus 80 ~~gv~cVEaGgp~pG~gcagrgii~~~~lle~~~~~~~~~D~Vl~DvLGdVvcGgFa~Pir~~~Ad-------eV~IVts 152 (275)
T PRK13233 80 FKGIRCVESGGPEPGVGCAGRGVITAITLMEEHGAYEDDLDFVFFDVLGDVVCGGFAMPIRDGKAQ-------EVYIVAS 152 (275)
T ss_pred CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC-------EEEEEEC
T ss_conf 898579868999866655763123588889980974346888998415611055510343136688-------8999946
Q ss_pred CCCCHHHHH---HHHHHH-HHHCCCEEEEEEECCCCCCCHHH---HHHHHCCCCEEEEECCCCCC
Q ss_conf 776504579---999999-98479907999976977800599---99986199899994788888
Q gi|254780487|r 132 TSLGTINHS---LLSLET-LRNRNINIIGIAFIGDSMPKVEE---TIVKIGRIPHLGRLPKIDPI 189 (217)
Q Consensus 132 ~~~g~i~~~---~l~~~~-~~~~g~~i~GiIlN~~~~~~~~~---~le~~~~ipvLG~iP~~~~~ 189 (217)
T Consensus 153 ~E~msL~aannI~~~l~~~~~~~~~~l~Gii~N~r~~~~e~~~v~~fa~~ig~~vi~~IPr~~~V 217 (275)
T PRK13233 153 GEMMALYAANNICKGLVKYAEQSGVRLGGIICNSRNVDGELELLEEFTDAIGTQLIHFVPRDNIV 217 (275)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCHHH
T ss_conf 83799999999999999985058963899997178886079999999998599579977897788