HHsearch alignment for GI: 254780487 and conserved domain: PRK13233

>PRK13233 nifH nitrogenase reductase; Reviewed.
Probab=99.11  E-value=3.8e-09  Score=76.70  Aligned_cols=181  Identities=13%  Similarity=0.047  Sum_probs=101.8

Q ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHHHC-CCCCCEECCCCCCCHHHHHHH----------HHC----CCCCCCCCCCCC
Q ss_conf             98329998358987479999999999840-486120138873806899999----------855----787311443001
Q gi|254780487|r    1 MKLRLVIVGTDTSVGKTIFASALVHALNA-YYWKPIQSGMYEETDSKTIHR----------IGR----IPKSHIIPEKWK   65 (217)
Q Consensus         1 M~~~i~I~GT~t~vGKT~vs~~L~~~l~~-~~~KPv~~G~~~~~D~~~~~~----------~~~----~~~~~~~~~~~~   65 (217)
T Consensus         1 m~~~iaiyG-KGGIGKSTTt~NLaaALA~l~GkrVl~IgcDPk~dST~~l~g~~~~~tv~d~l~~~~~~~~~~e~ii~~g   79 (275)
T PRK13233          1 MTRKIAIYG-KGGIGKSTTTQNTAAAMAHFHDKKVFIHGCDPKADSTRLILGGKPQTTMMDTLRELGEEKVTPDKVIKTG   79 (275)
T ss_pred             CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHCC
T ss_conf             973899989-9854465459999999996479889997978876136776089878839999986288755388887537


Q ss_pred             CCCCH-----HHHHHHHHHHCCCH------HHHHHHHHHCCEEEEECCCCCCCCCCCC---CCHHHHHHHHCCCEEEEEC
Q ss_conf             45103-----47889998502350------7886422328879992276555667675---3089999974794489705
Q gi|254780487|r   66 LRTPA-----SPHLAAEIDGVIID------PATINPPDINDSIIIEGIGGLLVPLTTE---YLFIDLIERWQFPIILCAR  131 (217)
Q Consensus        66 ~~~~~-----~~~~~~~~~~~~i~------~~~~~~~~~~D~viIEGagg~~~~~~~~---~~~~dla~~l~~~vILV~~  131 (217)
T Consensus        80 ~~gv~cVEaGgp~pG~gcagrgii~~~~lle~~~~~~~~~D~Vl~DvLGdVvcGgFa~Pir~~~Ad-------eV~IVts  152 (275)
T PRK13233         80 FKGIRCVESGGPEPGVGCAGRGVITAITLMEEHGAYEDDLDFVFFDVLGDVVCGGFAMPIRDGKAQ-------EVYIVAS  152 (275)
T ss_pred             CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC-------EEEEEEC
T ss_conf             898579868999866655763123588889980974346888998415611055510343136688-------8999946


Q ss_pred             CCCCHHHHH---HHHHHH-HHHCCCEEEEEEECCCCCCCHHH---HHHHHCCCCEEEEECCCCCC
Q ss_conf             776504579---999999-98479907999976977800599---99986199899994788888
Q gi|254780487|r  132 TSLGTINHS---LLSLET-LRNRNINIIGIAFIGDSMPKVEE---TIVKIGRIPHLGRLPKIDPI  189 (217)
Q Consensus       132 ~~~g~i~~~---~l~~~~-~~~~g~~i~GiIlN~~~~~~~~~---~le~~~~ipvLG~iP~~~~~  189 (217)
T Consensus       153 ~E~msL~aannI~~~l~~~~~~~~~~l~Gii~N~r~~~~e~~~v~~fa~~ig~~vi~~IPr~~~V  217 (275)
T PRK13233        153 GEMMALYAANNICKGLVKYAEQSGVRLGGIICNSRNVDGELELLEEFTDAIGTQLIHFVPRDNIV  217 (275)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCHHH
T ss_conf             83799999999999999985058963899997178886079999999998599579977897788