HHsearch alignment for GI: 254780487 and conserved domain: TIGR00313

>TIGR00313 cobQ cobyric acid synthase CobQ; InterPro: IPR004459 Cobyric acid synthase (CobQ) catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolysed for each amidation .; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=99.97  E-value=7.5e-31  Score=212.73  Aligned_cols=185  Identities=20%  Similarity=0.196  Sum_probs=146.3

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCCCC--CEECCC-----------CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCH-
Q ss_conf             99983589874799999999998404861--201388-----------7380689999985578731144300145103-
Q gi|254780487|r    5 LVIVGTDTSVGKTIFASALVHALNAYYWK--PIQSGM-----------YEETDSKTIHRIGRIPKSHIIPEKWKLRTPA-   70 (217)
Q Consensus         5 i~I~GT~t~vGKT~vs~~L~~~l~~~~~K--Pv~~G~-----------~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-   70 (217)
T Consensus         1 iMV~GTsS~AGKs~l~AaLCRiL~rrGy~VAPFKsQNMSLNSfvt~~~~EiA~AQ~~QA~AAGieP~~~mNPvLLKPkgd   80 (502)
T TIGR00313         1 IMVVGTSSSAGKSLLTAALCRILARRGYRVAPFKSQNMSLNSFVTAEGGEIAIAQALQALAAGIEPSVHMNPVLLKPKGD   80 (502)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             95420115402899999999998527881278501101013331137875513768999863878862348710167888


Q ss_pred             -----------------HHHHHH--HHHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCC--CCCCHHHHHHHHCCCEEEE
Q ss_conf             -----------------478899--9850235078864223288799922765556676--7530899999747944897
Q gi|254780487|r   71 -----------------SPHLAA--EIDGVIIDPATINPPDINDSIIIEGIGGLLVPLT--TEYLFIDLIERWQFPIILC  129 (217)
Q Consensus        71 -----------------~~~~~~--~~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~--~~~~~~dla~~l~~~vILV  129 (217)
T Consensus        81 f~SQviv~G~a~g~~~~~~Y~~~~~d~~~~~i~eSle~L~~~Yd~vv~EGAGS~AEINL~~rDLaN~~iA~~~~A~~iLv  160 (502)
T TIGR00313        81 FTSQVIVHGRAVGDMNAQEYYKNKVDFLLKAIKESLEILAEEYDLVVIEGAGSPAEINLKERDLANMRIAELADADVILV  160 (502)
T ss_pred             CEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEE
T ss_conf             46678984112466761567779999999999999987520288899826887100053315722478986439767999


Q ss_pred             ECCCCCHHHHH-HHHHHHHHHC-CCEEEEEEECCCCC-----CCHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf             05776504579-9999999847-99079999769778-----0059999986199899994788888
Q gi|254780487|r  130 ARTSLGTINHS-LLSLETLRNR-NINIIGIAFIGDSM-----PKVEETIVKIGRIPHLGRLPKIDPI  189 (217)
Q Consensus       130 ~~~~~g~i~~~-~l~~~~~~~~-g~~i~GiIlN~~~~-----~~~~~~le~~~~ipvLG~iP~~~~~  189 (217)
T Consensus       161 ADIDRGGVFAsi~GTl~LL~~~~r~liKG~vINkfRG~~~vL~~GI~~lEelTGiPVLGv~PY~~~l  227 (502)
T TIGR00313       161 ADIDRGGVFASIYGTLKLLPEEERKLIKGIVINKFRGNVDVLESGIEKLEELTGIPVLGVLPYDENL  227 (502)
T ss_pred             EECCCCCCHHHHHHHHHHCCCCCCCEECEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             7507774324337466618834575003068835468724434456899885484234465012577