HHsearch alignment for GI: 254780487 and conserved domain: TIGR01007

>TIGR01007 eps_fam capsular exopolysaccharide family; InterPro: IPR005702 This family describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis (EPS). At least 13 genes EpsA to EpsM in streptococcus species seem to direct the EPS proteins and share high homology. ; GO: 0030234 enzyme regulator activity, 0045227 capsule polysaccharide biosynthetic process.
Probab=98.93  E-value=1.1e-08  Score=73.88  Aligned_cols=156  Identities=13%  Similarity=0.128  Sum_probs=106.0

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHCCCCC----------CEECCCCCCCH-----HHHHHHHHCCCCC----CC-CCC
Q ss_conf             3299983589874799999999998404861----------20138873806-----8999998557873----11-443
Q gi|254780487|r    3 LRLVIVGTDTSVGKTIFASALVHALNAYYWK----------PIQSGMYEETD-----SKTIHRIGRIPKS----HI-IPE   62 (217)
Q Consensus         3 ~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~K----------Pv~~G~~~~~D-----~~~~~~~~~~~~~----~~-~~~   62 (217)
T Consensus        20 K~l~itS~~~~eGKsT~S~NiA~~fAqaGyKTLlIDgD~R~sv~~~~Fk~~n~~~GLtn~L~g~~dl~~~i~~T~isenL   99 (207)
T TIGR01007        20 KVLLITSVKAGEGKSTTSANIAVSFAQAGYKTLLIDGDMRNSVMSGTFKSQNKIKGLTNFLSGNTDLSDAICETNISENL   99 (207)
T ss_pred             EEEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHCCCCCCCC
T ss_conf             58998411058886241078899998568558887546586603678658887656333221454533342026546787


Q ss_pred             CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHH
Q ss_conf             00145103478899985023507886422328879992276555667675308999997479448970577650457999
Q gi|254780487|r   63 KWKLRTPASPHLAAEIDGVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTSLGTINHSLL  142 (217)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~~g~i~~~~l  142 (217)
T Consensus       100 ~vi~sG~vPPNPt~LL~s~~F~~l~e~~~~~fD~iiiDTP------Pig~V~DAai~a~~~d~~~LV~~A~~~~k~~v~K  173 (207)
T TIGR01007       100 DVITSGPVPPNPTELLQSSNFKTLIETLRKYFDYIIIDTP------PIGTVIDAAIIARAVDASILVTDAGKIKKREVKK  173 (207)
T ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC------CCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH
T ss_conf             2751788787754788889999999998716888999518------8666788999998729779887225326467899


Q ss_pred             HHHHHHHCCCEEEEEEECCCCC
Q ss_conf             9999984799079999769778
Q gi|254780487|r  143 SLETLRNRNINIIGIAFIGDSM  164 (217)
Q Consensus       143 ~~~~~~~~g~~i~GiIlN~~~~  164 (217)
T Consensus       174 AK~~LEq~G~~~LGvvLNK~d~  195 (207)
T TIGR01007       174 AKEQLEQAGSKFLGVVLNKVDI  195 (207)
T ss_pred             HHHHHHHHCCCEEEEEECCCCC
T ss_conf             9999986178411588888257