HHsearch alignment for GI: 254780487 and conserved domain: TIGR01448
>TIGR01448 recD_rel helicase, RecD/TraA family; InterPro: IPR006345 These sequences represent a family similar to RecD, the exodeoxyribonuclease V alpha chain of IPR006344 from INTERPRO. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. .
Probab=93.04 E-value=0.48 Score=25.99 Aligned_cols=25 Identities=24% Similarity=0.388 Sum_probs=21.5
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 3299983589874799999999998
Q gi|254780487|r 3 LRLVIVGTDTSVGKTIFASALVHAL 27 (217)
Q Consensus 3 ~~i~I~GT~t~vGKT~vs~~L~~~l 27 (217)
T Consensus 365 ~Kv~iLTGGPGTGKtT~t~~i~~~~ 389 (769)
T TIGR01448 365 DKVVILTGGPGTGKTTITKAIIELY 389 (769)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9489985778886168999999999