HHsearch alignment for GI: 254780487 and conserved domain: TIGR03029
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=98.77 E-value=2.6e-07 Score=65.27 Aligned_cols=152 Identities=12% Similarity=0.091 Sum_probs=91.7
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHCCCCC----------CEECCCC-CCCHHHHHHHHHCCCCCCCC-------CCCC
Q ss_conf 3299983589874799999999998404861----------2013887-38068999998557873114-------4300
Q gi|254780487|r 3 LRLVIVGTDTSVGKTIFASALVHALNAYYWK----------PIQSGMY-EETDSKTIHRIGRIPKSHII-------PEKW 64 (217)
Q Consensus 3 ~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~K----------Pv~~G~~-~~~D~~~~~~~~~~~~~~~~-------~~~~ 64 (217)
T Consensus 104 ~~LaItS~~pGEGKS~vAaNLA~~~Aq~G~RvLLVDaDLRrP~lh~~f~l~~~~GLs~vL~g-~~~l~~i~~~~~~~nL~ 182 (274)
T TIGR03029 104 KALAVVSAKSGEGCSYIAANLAIVFSQLGEKTLLIDANLRDPVQHRNFKLSEQRGLSDILAG-RSDLEVITHIPALENLS 182 (274)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCCHHHHHCC-CCCHHHEEECCCCCCEE
T ss_conf 38999689999989999999999999679919999588888447797599997687888459-99889905158989978
Q ss_pred CCCCCHHHHHHHH-HHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHH
Q ss_conf 1451034788999-850235078864223288799922765556676753089999974794489705776504579999
Q gi|254780487|r 65 KLRTPASPHLAAE-IDGVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTSLGTINHSLLS 143 (217)
Q Consensus 65 ~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~~g~i~~~~l~ 143 (217)
T Consensus 183 VLpaG~~ppnP~eLL~s~~~~~ll~~l~~~yD~IIiDTPP------vl~~sDA~ila~~aDg~LlVvR~~~T~~~~l~~a 256 (274)
T TIGR03029 183 VLPAGAIPPNPQELLARPAFTDLLNKVMGDYDVVIVDTPS------AEHSSDAQIVATRARGTLIVSRVNETRLHELTSL 256 (274)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCC------CCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHH
T ss_conf 9969999989799873589999999998409999993898------6554349999986897999996898889999999
Q ss_pred HHHHHHCCCEEEEEEECC
Q ss_conf 999984799079999769
Q gi|254780487|r 144 LETLRNRNINIIGIAFIG 161 (217)
Q Consensus 144 ~~~~~~~g~~i~GiIlN~ 161 (217)
T Consensus 257 ~~~L~~~g~~VlGvVLNq 274 (274)
T TIGR03029 257 KEHLSGVGVRVVGAVLNQ 274 (274)
T ss_pred HHHHHHCCCCEEEEEECC
T ss_conf 999997799668998487