HHsearch alignment for GI: 254780487 and conserved domain: cd01983
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=97.82 E-value=9.2e-05 Score=49.26 Aligned_cols=96 Identities=19% Similarity=0.138 Sum_probs=62.2
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 29998358987479999999999840486120138873806899999855787311443001451034788999850235
Q gi|254780487|r 4 RLVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAAEIDGVII 83 (217)
Q Consensus 4 ~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 83 (217)
T Consensus 1 ~i~~~~~k-GvGKTT~a~~La~~la~~g~~Vl~vD--------------------------------------------- 34 (99)
T cd01983 1 VIVVTGKG-GVGKTTLAANLAAALAKRGKRVLLID--------------------------------------------- 34 (99)
T ss_pred CEEEECCC-CCCHHHHHHHHHHHHHHCCCEEEEEC---------------------------------------------
T ss_conf 98985899-77689999999999998899699986---------------------------------------------
Q ss_pred HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHH---HHHHHCCCEEEEEEEC
Q ss_conf 0788642232887999227655566767530899999747944897057765045799999---9998479907999976
Q gi|254780487|r 84 DPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTSLGTINHSLLSL---ETLRNRNINIIGIAFI 160 (217)
Q Consensus 84 ~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~~g~i~~~~l~~---~~~~~~g~~i~GiIlN 160 (217)
T Consensus 35 -----------d~iiiD~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~n 99 (99)
T cd01983 35 -----------DYVLIDTPPGLGLLVLL----CLLALLAADLVIIVTTPEALAVLGARRLTEVVLELAIEGLRPVGVVVN 99 (99)
T ss_pred -----------CCEEECCCCCCCHHHHH----HHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
T ss_conf -----------71788589988846899----998787589589965984889999999999999841069815788539