HHsearch alignment for GI: 254780487 and conserved domain: cd03113
>cd03113 CTGs CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain. The enzymes hydrolyze the amide bond of glutamine to ammonia and glutamate at the glutaminase domains and transfer nascent ammonia to the acceptor substrate at the synthetase domain to form an aminated product. Glutaminase domains have evolved from the same ancestor, whereas the synthetase domains are evolutionarily unrelated and have different functions. This protein family is classified based on the N-terminal synthetase domain.
Probab=90.71 E-value=1.3 Score=23.36 Aligned_cols=176 Identities=20% Similarity=0.172 Sum_probs=83.3
Q ss_pred CEEEEECC-CCCCCHHHHHHHHHHHHHCCCCC------------------CEECC--------CCCCCHHHHHHHHHCCC
Q ss_conf 32999835-89874799999999998404861------------------20138--------87380689999985578
Q gi|254780487|r 3 LRLVIVGT-DTSVGKTIFASALVHALNAYYWK------------------PIQSG--------MYEETDSKTIHRIGRIP 55 (217)
Q Consensus 3 ~~i~I~GT-~t~vGKT~vs~~L~~~l~~~~~K------------------Pv~~G--------~~~~~D~~~~~~~~~~~ 55 (217)
T Consensus 1 Kyi~VtGGV~SglGKGi~~aSig~ll~~~g~~V~~~K~DPYlNvD~GtM~P~eHGEVfV~~DG~EtDlDlG~YERFl~~~ 80 (255)
T cd03113 1 KYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTAQKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLDTN 80 (255)
T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCC
T ss_conf 98999488201573089999999999978975889842565013899888454761778788761046664145435787
Q ss_pred CCCCC-CCC-CCC---------------CCCHHHHHHHHHHHCCCHHHHHHH--HHHCCEEEEECCCCCCCCCCCCCCHH
Q ss_conf 73114-430-014---------------510347889998502350788642--23288799922765556676753089
Q gi|254780487|r 56 KSHII-PEK-WKL---------------RTPASPHLAAEIDGVIIDPATINP--PDINDSIIIEGIGGLLVPLTTEYLFI 116 (217)
Q Consensus 56 ~~~~~-~~~-~~~---------------~~~~~~~~~~~~~~~~i~~~~~~~--~~~~D~viIEGagg~~~~~~~~~~~~ 116 (217)
T Consensus 81 lt~~~niTtGkiy~~VI~kER~G~YLGkTVQvIPHvTdeI-----k~~I~~~a~~~~~Di~ivEiGGTVGD--iEs~pFl 153 (255)
T cd03113 81 LSRDNNITTGKIYSSVIEKERRGDYLGKTVQVIPHITDEI-----KERIRRVAEKSGADVVIVEIGGTVGD--IESLPFL 153 (255)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHH-----HHHHHHHHCCCCCCEEEEECCCEEEC--CCHHHHH
T ss_conf 7776775052889999877644676897068878736999-----99999860468997899976863522--4220799
Q ss_pred HHHHH----HCC-CEEEEECC---CCCHH-----HHHHHHHHHHHHCCCEEEEEEECC--CCCCCHHHHHHHHCCCCEEE
Q ss_conf 99997----479-44897057---76504-----579999999984799079999769--77800599999861998999
Q gi|254780487|r 117 DLIER----WQF-PIILCART---SLGTI-----NHSLLSLETLRNRNINIIGIAFIG--DSMPKVEETIVKIGRIPHLG 181 (217)
Q Consensus 117 dla~~----l~~-~vILV~~~---~~g~i-----~~~~l~~~~~~~~g~~i~GiIlN~--~~~~~~~~~le~~~~ipvLG 181 (217)
T Consensus 154 EAiRQl~~e~g~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lr~~GI~PDiivcRse~~l~~~~k~KIa~fc~V~~~~ 233 (255)
T cd03113 154 EAIRQMKLELGRENVLFIHVTLVPYLKAAGELKTKPTQHSVKELRSIGIQPDILVCRSEKPLPPEIREKIALFCDVPPEA 233 (255)
T ss_pred HHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHH
T ss_conf 99999986439875799987630022787643466428999999975899887998057869978999999854998788
Q ss_pred EECC
Q ss_conf 9478
Q gi|254780487|r 182 RLPK 185 (217)
Q Consensus 182 ~iP~ 185 (217)
T Consensus 234 Vi~~ 237 (255)
T cd03113 234 VISA 237 (255)
T ss_pred EEEC
T ss_conf 7986