HHsearch alignment for GI: 254780487 and conserved domain: cd03114
>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=96.12 E-value=0.099 Score=30.26 Aligned_cols=114 Identities=20% Similarity=0.142 Sum_probs=55.6
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCC-CEE--------CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC-CCHHHHH
Q ss_conf 99983589874799999999998404861-201--------3887380689999985578731144300145-1034788
Q gi|254780487|r 5 LVIVGTDTSVGKTIFASALVHALNAYYWK-PIQ--------SGMYEETDSKTIHRIGRIPKSHIIPEKWKLR-TPASPHL 74 (217)
Q Consensus 5 i~I~GT~t~vGKT~vs~~L~~~l~~~~~K-Pv~--------~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 74 (217)
T Consensus 2 iGitG~-pGaGKStLi~~l~~~~~~~g~~VaVlavDPsS~~sgGalLGDRiRm~~~~~~~~vfiRs~atrg~~ggla~~~ 80 (148)
T cd03114 2 IGITGV-PGAGKSTLIDALITALRARGKRVAVLAIDPSSPFSGGAILGDRIRMERHASDPGVFIRSLATRGFLGGLSRAT 80 (148)
T ss_pred EEECCC-CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHH
T ss_conf 762589-9787899999999999978983799996888786686203235453441579983686346666542046889
Q ss_pred HHHHHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCC
Q ss_conf 9998502350788642232887999227655566767530899999747944897057765
Q gi|254780487|r 75 AAEIDGVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTSLG 135 (217)
Q Consensus 75 ~~~~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~~g 135 (217)
T Consensus 81 ~--------~~i~~l~~~g~D~IiIETvGv-------GQse~~i~~~aD~-~i~v~~p~~G 125 (148)
T cd03114 81 P--------EVIRVLDAAGFDVIIVETVGV-------GQSEVDIASMADT-TVVVMAPGAG 125 (148)
T ss_pred H--------HHHHHHHHCCCCEEEEECCCC-------CCCHHHHHHHCCE-EEEEECCCCC
T ss_conf 9--------999999975999899974877-------7560265543566-9999636887