HHsearch alignment for GI: 254780487 and conserved domain: pfam03308
>pfam03308 ArgK ArgK protein. The ArgK protein acts as an ATPase enzyme and as a kinase, and phosphorylates periplasmic binding proteins involved in the LAO (lysine, arginine, ornithine)/AO transport systems.
Probab=94.91 E-value=0.3 Score=27.29 Aligned_cols=113 Identities=19% Similarity=0.137 Sum_probs=61.0
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEE----------CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC-CHH
Q ss_conf 3299983589874799999999998404861201----------38873806899999855787311443001451-034
Q gi|254780487|r 3 LRLVIVGTDTSVGKTIFASALVHALNAYYWKPIQ----------SGMYEETDSKTIHRIGRIPKSHIIPEKWKLRT-PAS 71 (217)
Q Consensus 3 ~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~----------~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 71 (217)
T Consensus 30 ~~iGiTG~-PGaGKStli~~l~~~~~~~g~~-vaVlAvDPSS~~sgGaiLGDr~RM~~~~~~~~vfiRs~~srg~lGGls 107 (267)
T pfam03308 30 HRVGITGV-PGAGKSTLIEALGMELRRRGHR-VAVLAVDPSSPFTGGSILGDRTRMQRLAVDPGAFIRSSPSRGALGGLS 107 (267)
T ss_pred EEEEEECC-CCCCHHHHHHHHHHHHHHCCCE-EEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCC
T ss_conf 59987689-9887999999999999968986-899997899988886300107777650589985886457788888714
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECC
Q ss_conf 7889998502350788642232887999227655566767530899999747944897057
Q gi|254780487|r 72 PHLAAEIDGVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCART 132 (217)
Q Consensus 72 ~~~~~~~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~ 132 (217)
T Consensus 108 ~~--------t~~~i~lleaaGfD~IivETVGV-------GQsE~~v~~~aD~~llv~~Pg 153 (267)
T pfam03308 108 RA--------TREAILLLDAAGFDVIIIETVGV-------GQSEVDIANMADTFVLVTIPG 153 (267)
T ss_pred HH--------HHHHHHHHHHCCCCEEEEECCCC-------CCCCHHHHHHCCEEEEEECCC
T ss_conf 76--------99999999977999999924777-------753035554157689995588