HHsearch alignment for GI: 254780487 and conserved domain: pfam06418
>pfam06418 CTP_synth_N CTP synthase N-terminus. This family consists of the N-terminal region of the CTP synthase protein (EC:6.3.4.2). This family is found in conjunction with pfam00117 located in the C-terminal region of the protein. CTP synthase catalyses the synthesis of CTP from UTP by amination of the pyrimidine ring at the 4-position.
Probab=91.83 E-value=0.97 Score=24.06 Aligned_cols=182 Identities=18% Similarity=0.094 Sum_probs=83.9
Q ss_pred CCEEEEECC-CCCCCHHHHHHHHHHHHHCCCCC------------------CEECCC--------CCCCHHHHHHHHHCC
Q ss_conf 832999835-89874799999999998404861------------------201388--------738068999998557
Q gi|254780487|r 2 KLRLVIVGT-DTSVGKTIFASALVHALNAYYWK------------------PIQSGM--------YEETDSKTIHRIGRI 54 (217)
Q Consensus 2 ~~~i~I~GT-~t~vGKT~vs~~L~~~l~~~~~K------------------Pv~~G~--------~~~~D~~~~~~~~~~ 54 (217)
T Consensus 1 tkyi~vtGGV~SglGKGi~~aSig~ll~~~g~~v~~~K~DpYlNvD~Gtm~P~eHGEVfV~~DG~EtDlDlG~YERFl~~ 80 (275)
T pfam06418 1 TKYIFVTGGVVSSLGKGITAASLGRLLKSRGLKVTIQKIDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFLDI 80 (275)
T ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHCCC
T ss_conf 93999959850256318999999999996796367874156312388877833156078737874014767523431477
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHC----C----------CHHHHHH-HHHHCCEEEEECCCCCC--CCCCCCCCHHH
Q ss_conf 873114430014510347889998502----3----------5078864-22328879992276555--66767530899
Q gi|254780487|r 55 PKSHIIPEKWKLRTPASPHLAAEIDGV----I----------IDPATIN-PPDINDSIIIEGIGGLL--VPLTTEYLFID 117 (217)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----------i~~~~~~-~~~~~D~viIEGagg~~--~~~~~~~~~~d 117 (217)
T Consensus 81 ~l~~~~--niTtGkiy~~Vi~kER~G~YLGkTVQvIPHiTdeIk~~I~~~a~~~~Di~ivEiGGTVGDIEs~pFlEAiRQ 158 (275)
T pfam06418 81 NLTKDN--NITTGKIYSSVIEKERRGDYLGKTVQVIPHITDEIKERIRRVAAKGADVVIVEIGGTVGDIESLPFLEAIRQ 158 (275)
T ss_pred CCCCCC--CCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCHHHHHHHH
T ss_conf 756666--634018899999887556758971587788569999999985567897899975760100102289999999
Q ss_pred HHHHHCC-CEEEEECC---CCCHH-----HHHHHHHHHHHHCCCEEEEEEEC--CCCCCCHHHHHHHHCCCCEEEEECC
Q ss_conf 9997479-44897057---76504-----57999999998479907999976--9778005999998619989999478
Q gi|254780487|r 118 LIERWQF-PIILCART---SLGTI-----NHSLLSLETLRNRNINIIGIAFI--GDSMPKVEETIVKIGRIPHLGRLPK 185 (217)
Q Consensus 118 la~~l~~-~vILV~~~---~~g~i-----~~~~l~~~~~~~~g~~i~GiIlN--~~~~~~~~~~le~~~~ipvLG~iP~ 185 (217)
T Consensus 159 l~~~~g~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVkeLrs~GIqPDilvcRse~~l~~~~k~KIslfcnV~~~~VI~~ 237 (275)
T pfam06418 159 FRLEVGRENVLFIHVTLVPYLKAAGELKTKPTQHSVKELRSIGIQPDILVCRSEKPLDEETKEKIALFCNVPKEAVISA 237 (275)
T ss_pred HHHHHCCCCEEEEEEEECCEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHEEEE
T ss_conf 9887287756999987324436887545673288899999648998758870678999999999987639986678984