HHsearch alignment for GI: 254780487 and conserved domain: pfam07755
>pfam07755 DUF1611 Protein of unknown function (DUF1611). This region is found in a number of hypothetical bacterial and archaeal proteins. The region is approximately 350 residues long. A member of this family is thought to associate with another subunit to form an H+-transporting ATPase, but no evidence has been found to support this.
Probab=98.68 E-value=1.3e-06 Score=60.95 Aligned_cols=162 Identities=22% Similarity=0.297 Sum_probs=93.9
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC--EECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 832999835898747999999999984048612--013887380689999985578731144300145103478899985
Q gi|254780487|r 2 KLRLVIVGTDTSVGKTIFASALVHALNAYYWKP--IQSGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAAEID 79 (217)
Q Consensus 2 ~~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KP--v~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (217)
T Consensus 113 ~~rvl~vGTDcavGK~tTal~l~~~l~~~Gi~a~fiaTGQTG-----ili--~g--------~Gv~iDav~~DFvaGavE 177 (302)
T pfam07755 113 AKRVLTVGTDCAVGKMTTALELERALRERGLNAAFVATGQTG-----ILI--AG--------YGVPLDAVPADFVAGAVE 177 (302)
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCE-----EEE--EC--------CEEEECCCHHHHHHHHHH
T ss_conf 878999605733407899999999999779984799727613-----688--15--------247843224766767899
Q ss_pred HCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCC-EEEEECCCC-----------CHHHHHHHHHHHH
Q ss_conf 0235078864223288799922765556676753089999974794-489705776-----------5045799999999
Q gi|254780487|r 80 GVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFP-IILCARTSL-----------GTINHSLLSLETL 147 (217)
Q Consensus 80 ~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~-vILV~~~~~-----------g~i~~~~l~~~~~ 147 (217)
T Consensus 178 ~-----~v~~~~~~~d~iiIEGQgSL~hP~y~gvsl~-lL~Gs~Pd~lIL~H~p~R~~~~~~~~~~iP~l~~~i~l~e~~ 251 (302)
T pfam07755 178 A-----LVLDAAEEDDWIVIEGQGSLSHPAYSGVTLG-LLHGSQPDALVLCHRPGRKHRRGFPHYPLPPLEEEIELIEAL 251 (302)
T ss_pred H-----HHHHHCCCCCEEEEECCCCCCCCCCCCCCHH-HHCCCCCCEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 9-----9986454678799916543236656654598-860789986999637898622787668899989999999997
Q ss_pred HHC--CCEEEEEEECCCCCCCH-----HHHHHHHCCCCEEEEECCC
Q ss_conf 847--99079999769778005-----9999986199899994788
Q gi|254780487|r 148 RNR--NINIIGIAFIGDSMPKV-----EETIVKIGRIPHLGRLPKI 186 (217)
Q Consensus 148 ~~~--g~~i~GiIlN~~~~~~~-----~~~le~~~~ipvLG~iP~~ 186 (217)
T Consensus 252 a~~~~~~kvvgIslNt~~l~~~ea~~~~~~~~~~~glPv~--Dp~r 295 (302)
T pfam07755 252 AGTTPPAKVVGISLNTRGLSEAEAREAIERIEEELGLPVT--DPVR 295 (302)
T ss_pred HCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEE--ECCC
T ss_conf 3647997399999557879999999999999999899747--1212