HHsearch alignment for GI: 254780488 and conserved domain: COG0076
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].
Probab=98.47 E-value=4.9e-06 Score=60.95 Aligned_cols=264 Identities=18% Similarity=0.163 Sum_probs=134.0
Q ss_pred CCCCCCHHHHH----HHHHHHHHHCCHH--CCCCCCHHHHHHHHHHHHHCCCC-CCCEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 67878999999----9999998522010--24568978999999999720378-64111026542025677776430013
Q gi|254780488|r 53 THGHRHPIIMN----AIRSASENYDQII--FSEYTHEPAEQLARLLIKIAPLG-LQYVFFSDSGSTSIEVALKMALGFFN 125 (423)
Q Consensus 53 ~lGh~~~~i~~----a~~~q~~~~~~~~--~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~SGsEA~e~Alklar~~~~ 125 (423)
T Consensus 66 ~~~~~~~~~~~~a~~~~~~~~~~-nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~ 144 (460)
T COG0076 66 LAGFCPTRVPPVAAELLVSALNK-NLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWR 144 (460)
T ss_pred EECCCCCCCHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 76357888679999999998734-79981238315888999999999995799766067961707999999999999987
Q ss_pred CCC-------CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCEEEE
Q ss_conf 344-------3321134320256653211234322333333222344542100012222222111101221277511343
Q gi|254780488|r 126 NNN-------MPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAF 198 (423)
Q Consensus 126 ~~~-------~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~iaav 198 (423)
T Consensus 145 ~~~~~~~~~~~~~P~ii~s~-~aH~------------s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~ 210 (460)
T COG0076 145 KRALAESGKPGGKPNIVCSE-TAHF------------SFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGV 210 (460)
T ss_pred HHHHHCCCCCCCCCEEEECC-CCCE------------EHHHHHHHHCCCCEEEEEECC-CEEECHHHHHHHHHHHCCCCE
T ss_conf 66442023446887499457-4312------------099999981885237875247-505689999999987464764
Q ss_pred ECCCCCCCCCCCCCCC-CCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCC--C--CCCC-CCEEECC-CCCCCCCC
Q ss_conf 1165543211222233-3211001101112342000122124444555431122--3--3444-4202013-44332223
Q gi|254780488|r 199 LVEPLILGAGGMQTYR-PYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACN--H--ADIT-PDILCLS-KGITGGAL 271 (423)
Q Consensus 199 i~EP~i~~~gG~~~~~-~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~--~--~gi~-PDi~~~g-K~l~gG~~ 271 (423)
T Consensus 211 vV-----~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~---~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~ 282 (460)
T COG0076 211 VV-----GTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFL---LPFLEPDGRWDFGLEGVDSITVDGHKYGLAPI 282 (460)
T ss_pred EE-----EECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHH---HHCCCCCCHHHCCCCCCEEEEECCCCCCCCCC
T ss_conf 99-----97268888777889999999997699789873440021---10247422535178882089988642778888
Q ss_pred CCCCCCCCHH--HHHHHC------CCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCC---CHHHHHHHHHHH
Q ss_conf 4443322401--321000------12222222233333222210011000000000112332221---002678989999
Q gi|254780488|r 272 PLAATLCSEE--IFDSHL------SSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIK---NLERMHADRLSL 340 (423)
Q Consensus 272 pisav~~~~~--i~~~~~------~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~---~~g~~l~~~l~~ 340 (423)
T Consensus 283 ~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~--~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~ 360 (460)
T COG0076 283 GCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGR--QALALYANLRRLGREGYRKLLDRTLELARYLAEELEK 360 (460)
T ss_pred CCEEEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 70699996889846776123667787786663688505418--9999999999967888999999999999999999864
Q ss_pred H
Q ss_conf 7
Q gi|254780488|r 341 L 341 (423)
Q Consensus 341 L 341 (423)
T Consensus 361 ~ 361 (460)
T COG0076 361 L 361 (460)
T ss_pred C
T ss_conf 7