HHsearch alignment for GI: 254780488 and conserved domain: COG0076

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].
Probab=98.47  E-value=4.9e-06  Score=60.95  Aligned_cols=264  Identities=18%  Similarity=0.163  Sum_probs=134.0

Q ss_pred             CCCCCCHHHHH----HHHHHHHHHCCHH--CCCCCCHHHHHHHHHHHHHCCCC-CCCEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf             67878999999----9999998522010--24568978999999999720378-64111026542025677776430013
Q gi|254780488|r   53 THGHRHPIIMN----AIRSASENYDQII--FSEYTHEPAEQLARLLIKIAPLG-LQYVFFSDSGSTSIEVALKMALGFFN  125 (423)
Q Consensus        53 ~lGh~~~~i~~----a~~~q~~~~~~~~--~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~SGsEA~e~Alklar~~~~  125 (423)
T Consensus        66 ~~~~~~~~~~~~a~~~~~~~~~~-nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~  144 (460)
T COG0076          66 LAGFCPTRVPPVAAELLVSALNK-NLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWR  144 (460)
T ss_pred             EECCCCCCCHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHH
T ss_conf             76357888679999999998734-79981238315888999999999995799766067961707999999999999987


Q ss_pred             CCC-------CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCEEEE
Q ss_conf             344-------3321134320256653211234322333333222344542100012222222111101221277511343
Q gi|254780488|r  126 NNN-------MPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAF  198 (423)
Q Consensus       126 ~~~-------~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~iaav  198 (423)
T Consensus       145 ~~~~~~~~~~~~~P~ii~s~-~aH~------------s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~  210 (460)
T COG0076         145 KRALAESGKPGGKPNIVCSE-TAHF------------SFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGV  210 (460)
T ss_pred             HHHHHCCCCCCCCCEEEECC-CCCE------------EHHHHHHHHCCCCEEEEEECC-CEEECHHHHHHHHHHHCCCCE
T ss_conf             66442023446887499457-4312------------099999981885237875247-505689999999987464764


Q ss_pred             ECCCCCCCCCCCCCCC-CCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCC--C--CCCC-CCEEECC-CCCCCCCC
Q ss_conf             1165543211222233-3211001101112342000122124444555431122--3--3444-4202013-44332223
Q gi|254780488|r  199 LVEPLILGAGGMQTYR-PYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACN--H--ADIT-PDILCLS-KGITGGAL  271 (423)
Q Consensus       199 i~EP~i~~~gG~~~~~-~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~--~--~gi~-PDi~~~g-K~l~gG~~  271 (423)
T Consensus       211 vV-----~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~---~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~  282 (460)
T COG0076         211 VV-----GTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFL---LPFLEPDGRWDFGLEGVDSITVDGHKYGLAPI  282 (460)
T ss_pred             EE-----EECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHH---HHCCCCCCHHHCCCCCCEEEEECCCCCCCCCC
T ss_conf             99-----97268888777889999999997699789873440021---10247422535178882089988642778888


Q ss_pred             CCCCCCCCHH--HHHHHC------CCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCC---CHHHHHHHHHHH
Q ss_conf             4443322401--321000------12222222233333222210011000000000112332221---002678989999
Q gi|254780488|r  272 PLAATLCSEE--IFDSHL------SSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIK---NLERMHADRLSL  340 (423)
Q Consensus       272 pisav~~~~~--i~~~~~------~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~---~~g~~l~~~l~~  340 (423)
T Consensus       283 ~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~--~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~  360 (460)
T COG0076         283 GCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGR--QALALYANLRRLGREGYRKLLDRTLELARYLAEELEK  360 (460)
T ss_pred             CCEEEEEECHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             70699996889846776123667787786663688505418--9999999999967888999999999999999999864


Q ss_pred             H
Q ss_conf             7
Q gi|254780488|r  341 L  341 (423)
Q Consensus       341 L  341 (423)
T Consensus       361 ~  361 (460)
T COG0076         361 L  361 (460)
T ss_pred             C
T ss_conf             7