HHsearch alignment for GI: 254780488 and conserved domain: COG0399

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane].
Probab=98.47  E-value=2.1e-06  Score=63.39  Aligned_cols=311  Identities=16%  Similarity=0.194  Sum_probs=159.1

Q ss_pred             HHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEE
Q ss_conf             99999999999852201024568978999999999720378641110265420256777764300133443321134320
Q gi|254780488|r   59 PIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVME  138 (423)
Q Consensus        59 ~~i~~a~~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~SGsEA~e~Alklar~~~~~~~~~r~~ii~~~  138 (423)
T Consensus        15 ~~e~~~v~~vl~sg~-i~~----G~~v~~FE~~~ae~~--G~k~ava~~sgT~AL~laL~al~------ig~GDeVI~ps   81 (374)
T COG0399          15 EEELAAVQEVLKSGW-LTG----GPFVRRFEQAFAEYL--GVKYAVAVSSGTAALHLALLALA------IGPGDEVIVPS   81 (374)
T ss_pred             HHHHHHHHHHHHCCC-CCC----CHHHHHHHHHHHHHH--CCCEEEEECCHHHHHHHHHHHCC------CCCCCEEEECC
T ss_conf             579999999996197-416----867899999999984--99739996684899999999648------79999799368


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             25665321123432233333322234454210001222222211110122127751134311655432112222333211
Q gi|254780488|r  139 HGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYIL  218 (423)
Q Consensus       139 ~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l  218 (423)
T Consensus        82 ~Tfv--------ATan~i~~~Ga~PVFvDid~~T~n------id~~~ie~aIt~~-tKAIipV---hl~-G-~~~--d-m  138 (374)
T COG0399          82 FTFV--------ATANAVLLVGAKPVFVDIDPDTLN------IDPDLIEAAITPR-TKAIIPV---HLA-G-QPC--D-M  138 (374)
T ss_pred             CCHH--------HHHHHHHHCCCEEEEEECCCCCCC------CCHHHHHHHCCCC-CEEEEEE---HHC-C-CCC--C-H
T ss_conf             7539--------889999976996799964764147------7999999871557-7499985---121-6-877--9-8


Q ss_pred             CEEECCCCCCCCEECCCCCCCCCC------CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCH-HHHHHHC---C
Q ss_conf             001101112342000122124444------55543112233444420201344332223444332240-1321000---1
Q gi|254780488|r  219 KEFMRITKKYDTLLIADEVMTGWG------RTGKIFACNHADITPDILCLSKGITGGALPLAATLCSE-EIFDSHL---S  288 (423)
Q Consensus       219 ~~lr~lc~~~g~llI~DEV~tG~G------RtG~~~a~~~~gi~PDi~~~gK~l~gG~~pisav~~~~-~i~~~~~---~  288 (423)
T Consensus       139 ~~i~~la~~~~l~vIEDaAqa-~Ga~y~gk~vGt~Gd~~~fSF~~-----~K~ittg--EGGav~tnd~ela~k~~~lr~  210 (374)
T COG0399         139 DAIMALAKRHGLPVIEDAAQA-HGATYKGKKVGSFGDIGAFSFHA-----TKNLTTG--EGGAVVTNDEELAEKARSLRN  210 (374)
T ss_pred             HHHHHHHHHCCCEEEEECCHH-CCCEECCCCCCCCCCEEEEEECC-----CCCCCCC--CCEEEEECCHHHHHHHHHHHH
T ss_conf             999999987398499876032-06723584255666468998658-----7765566--750798388999999999998


Q ss_pred             CCCCC-------CCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCEE-EECCCCCEEE
Q ss_conf             22222-------222333332222100110000000001123322210026789899997518--9777-7745533999
Q gi|254780488|r  289 SDKKK-------TFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSN--KKFV-NIRQMGTIVA  358 (423)
Q Consensus       289 ~~~~~-------~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~L~~~--~~v~-~vrG~Gl~~~  358 (423)
T Consensus       211 hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~--~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~  288 (374)
T COG0399         211 HGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDE--INERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYT  288 (374)
T ss_pred             HCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEE
T ss_conf             376778665643521330038779999999999988899--999999999999998610787433578987612303668


Q ss_pred             EEECCCCCCCCCHHHHHHHHHHHHCCEE----EEECC------------------------CEEEECCCCCCCHHHHHHH
Q ss_conf             9970687666410689999999978859----99519------------------------9899568987879999999
Q gi|254780488|r  359 LDFNVQNKGYFFDKNAKLKNFFREKKIL----IRPLG------------------------HIMYLMPPYCITATDLDHI  410 (423)
Q Consensus       359 iel~~~~~~~~~~~~~~l~~~l~~~Gil----~~~~g------------------------n~i~l~Ppl~it~~eId~~  410 (423)
T Consensus       289 i~~~~~-----~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V  363 (374)
T COG0399         289 ILVDEE-----GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRV  363 (374)
T ss_pred             EEECCC-----CCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCCHHHHHHHCEEECCCCCCCCHHHHHHH
T ss_conf             982677-----778999999998678775166313443266650445666788228899617487258999899999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999987
Q gi|254780488|r  411 YNTINEAVDF  420 (423)
Q Consensus       411 l~~l~~aL~~  420 (423)
T Consensus       364 ~~~l~~~~~~  373 (374)
T COG0399         364 IEALKEVLGS  373 (374)
T ss_pred             HHHHHHHHCC
T ss_conf             9999998504