HHsearch alignment for GI: 254780488 and conserved domain: PRK01278
>PRK01278 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=100.00 E-value=0 Score=733.57 Aligned_cols=376 Identities=30% Similarity=0.496 Sum_probs=344.2
Q ss_pred CCCCCEEEEEEEEEEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 87786468862132899689876464102377536787899999999999985220102456897899999999972037
Q gi|254780488|r 19 CNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPL 98 (423)
Q Consensus 19 ~~~~p~~i~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~ 98 (423)
T Consensus 10 y~~~Pi~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~l~~~-~~~~~~~~~~~la~~L~~~~~- 87 (389)
T PRK01278 10 YNRADLRFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHV-SNLYRIPEQERLAERLVENSF- 87 (389)
T ss_pred CCCCCCCEEEEECCEEEECCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHCCC-
T ss_conf 899997779976599997998999993609886122899789999999998656676-565368799999999753367-
Q ss_pred CCCCEEECCCCCCHHHHHHHHHHHCCCCCC-CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
Q ss_conf 864111026542025677776430013344-3321134320256653211234322333333222344542100012222
Q gi|254780488|r 99 GLQYVFFSDSGSTSIEVALKMALGFFNNNN-MPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHN 177 (423)
Q Consensus 99 ~~~~v~f~~SGsEA~e~Alklar~~~~~~~-~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~ 177 (423)
T Consensus 88 -~d~v~f~~sGsEAve~AlklAr~~~~~~g~t~r~~ii~~~~~yHG~t~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d-- 164 (389)
T PRK01278 88 -ADKVFFTNSGAEAVECAIKTARRYQYGKGHPERYRIITFEGAFHGRTLATIAATGQEKYLEGFGPLVDGFDQVPFGD-- 164 (389)
T ss_pred -CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCC--
T ss_conf -68799968748999999999999888539999728999888888676351135788443366689988824677897--
Q ss_pred CCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22211110122127751134311655432112222333211001101112342000122124444555431122334444
Q gi|254780488|r 178 EEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITP 257 (423)
Q Consensus 178 ~~~~~l~~l~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~gi~P 257 (423)
T Consensus 165 -----~~~l~~~~~-~~iAaviiEP-i~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGRtG~~fa~e~~gv~P 237 (389)
T PRK01278 165 -----IEALKAAIT-PNTAAILIEP-IQGEGGIRPLPDEFLKGLRQLCDENGLLLIFDEVQCGVGRTGKLFAHEWAGVTP 237 (389)
T ss_pred -----HHHHHHHHC-CCCEEEEEEC-CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHCCCCCC
T ss_conf -----899998628-8817999968-888889606999999999999986065387421000777556642200367689
Q ss_pred CEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf 20201344332223444332240132100012222222233333222210011000000000112332221002678989
Q gi|254780488|r 258 DILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADR 337 (423)
Q Consensus 258 Di~~~gK~l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~ 337 (423)
T Consensus 238 Div~~gK~l~gG-~P~sav~~~~ei~~~~~------~g~~~~T~~gnp~~~aaala~L~~i~~~~l~~~v~~~G~~l~~~ 310 (389)
T PRK01278 238 DIMALAKGIGGG-FPLGACLATEEAAKGMT------PGTHGSTYGGNPLAMAVGNAVLDVVLAPGFLDNVQKMGLYLKQK 310 (389)
T ss_pred CEEEECCCCCCC-CCEEEEEECHHHHHHCC------CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 867870124688-74279986388785436------88767799979999999999999998646999999999999999
Q ss_pred HHHHHHCCC--EEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECC-CEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 999751897--777745533999997068766641068999999997885999519-98995689878799999999999
Q gi|254780488|r 338 LSLLKSNKK--FVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLG-HIMYLMPPYCITATDLDHIYNTI 414 (423)
Q Consensus 338 l~~L~~~~~--v~~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~g-n~i~l~Ppl~it~~eId~~l~~l 414 (423)
T Consensus 311 L~~l~~~~p~~i~~vRG~Gl~~gie~~~~--------~~~i~~~~~~~Gll~~~~g~~~lr~~PpL~it~~ei~~~~~~l 382 (389)
T PRK01278 311 LESLVDRFPDVIEEVRGEGLMLGLKCVVP--------SRDLVAALRDEGLLTVPAGDNVVRLLPPLIITEEEIDEALERL 382 (389)
T ss_pred HHHHHHHCCCCEEEEEEEEEEEEEEECCC--------HHHHHHHHHHCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 99998768671355645036999994588--------9999999997993897279997999788139899999999999
Q ss_pred HHHHHHH
Q ss_conf 9999875
Q gi|254780488|r 415 NEAVDFL 421 (423)
Q Consensus 415 ~~aL~~l 421 (423)
T Consensus 383 ~~al~~v 389 (389)
T PRK01278 383 ERAAESL 389 (389)
T ss_pred HHHHHHC
T ss_conf 9999759