HHsearch alignment for GI: 254780488 and conserved domain: PRK03715
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=100.00 E-value=0 Score=731.57 Aligned_cols=382 Identities=26% Similarity=0.420 Sum_probs=340.2
Q ss_pred CCCCCCCCEEEEEEEEEEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 76787786468862132899689876464102377536787899999999999985220102456897899999999972
Q gi|254780488|r 16 QHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKI 95 (423)
Q Consensus 16 ~~~~~~~p~~i~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~~la~~l~~~ 95 (423)
T Consensus 12 ~~~~~rppivi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~~~-~~~~~~~~~~~la~~L~~~ 90 (395)
T PRK03715 12 MYITNRPDIVFTHGKGSWLYDHTGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINP-SPAFYNEPMAKLAGLLTQH 90 (395)
T ss_pred CCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHCC
T ss_conf 665699980599835488997987999882317887774589699999999999754767-7320278999999998415
Q ss_pred CCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 03786411102654202567777643001334433211343202566532112343223333332223445421000122
Q gi|254780488|r 96 APLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPH 175 (423)
Q Consensus 96 ~p~~~~~v~f~~SGsEA~e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~ 175 (423)
T Consensus 91 ~--~~~~v~f~~sGsEAvE~AlKlAr~y~~~~~~gr~~ii~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~--- 165 (395)
T PRK03715 91 S--CFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAE--- 165 (395)
T ss_pred C--CCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC---
T ss_conf 5--88879981875889999999999986246899845999757889874022104686444556789889967555---
Q ss_pred CCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22222111101221277511343116554321122223332110011011123420001221244445554311223344
Q gi|254780488|r 176 HNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADI 255 (423)
Q Consensus 176 ~~~~~~~l~~l~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~gi 255 (423)
T Consensus 166 ----~~d~~~~~~~~~-~~~aAviiEP-iqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~fa~e~~gv 239 (395)
T PRK03715 166 ----LNDIASVEKLIT-DKTVAVMLEP-VQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELAGI 239 (395)
T ss_pred ----CCCHHHHHHHCC-CCEEEEEEEC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf ----455899997349-9807999937-8887798529889999999999518973562011038886668530004899
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 44202013443322234443322401321000122222222333332222100110000000001123322210026789
Q gi|254780488|r 256 TPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHA 335 (423)
Q Consensus 256 ~PDi~~~gK~l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~ 335 (423)
T Consensus 240 ~PDiv~~gKgl~gG-~Pl~av~~~~~i~-~~------~~g~~g~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~ 311 (395)
T PRK03715 240 EPDIMTLGKGIGGG-VPLAALLAKAEVA-VF------EAGDQGGTYNGNPLMTAVGYAVISQLVAPGFLEGVRARGEYLK 311 (395)
T ss_pred CCCEEEECCHHHCC-CCEEEEEECHHHC-CC------CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99989975244289-8528999826742-47------7898887989971899999999999962689999999999999
Q ss_pred HHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEE-ECCCEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 89999751897777745533999997068766641068999999997885999-51998995689878799999999999
Q gi|254780488|r 336 DRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIR-PLGHIMYLMPPYCITATDLDHIYNTI 414 (423)
Q Consensus 336 ~~l~~L~~~~~v~~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~-~~gn~i~l~Ppl~it~~eId~~l~~l 414 (423)
T Consensus 312 ~~L~~l~~~~~i~~vRG~Gl~~~iel~~~~~----~~~~~~~~~~~~~gll~~~~~~n~irl~PpL~it~~eid~~~~~l 387 (395)
T PRK03715 312 EKLLELSAERGLEGERGEGLLRALLLGKDIG----PQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTDEIDQMIAML 387 (395)
T ss_pred HHHHHHHCCCCCEEEEECCEEEEEEECCCCC----HHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 9999865039913574355899999678870----899999999983998992289998999799438899999999999
Q ss_pred HHHHHHH
Q ss_conf 9999875
Q gi|254780488|r 415 NEAVDFL 421 (423)
Q Consensus 415 ~~aL~~l 421 (423)
T Consensus 388 ~~aL~~l 394 (395)
T PRK03715 388 RSVLDKL 394 (395)
T ss_pred HHHHHHH
T ss_conf 9999986