HHsearch alignment for GI: 254780488 and conserved domain: PRK04612
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional.
Probab=100.00 E-value=0 Score=743.52 Aligned_cols=388 Identities=23% Similarity=0.390 Sum_probs=350.4
Q ss_pred CCCCHHHCCCCCCCCEEEEEEEEEEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHH
Q ss_conf 54341227678778646886213289968987646410237753678789999999999998522010245689789999
Q gi|254780488|r 9 PIWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQL 88 (423)
Q Consensus 9 ~~~~~~~~~~~~~~p~~i~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~~l 88 (423)
T Consensus 13 ~~~~~~----y~p~pivi~r~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Ai~~Q~~~l~~~~-~~~~~~~~~~l 87 (408)
T PRK04612 13 HYYLPV----YRPRQVVLERGQGSRVWDDQGREYLDLSSGIAVSGLGHNDPDLVAALTEQAGKLWHTS-NVFFSAPPLKL 87 (408)
T ss_pred HCCCCC----CCCCCEEEEEEECCEEEECCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC-CCCCCHHHHHH
T ss_conf 707465----7999716998563999969889999924507751225898999999999986525766-75226589999
Q ss_pred HHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCC--CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999972037864111026542025677776430013344--33211343202566532112343223333332223445
Q gi|254780488|r 89 ARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNN--MPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLF 166 (423)
Q Consensus 89 a~~l~~~~p~~~~~v~f~~SGsEA~e~Alklar~~~~~~~--~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~ 166 (423)
T Consensus 88 ae~L~~~~~-~~~~v~f~~SGsEAvE~AlKlAr~y~~~~G~~~~k~~ii~~~~syHG~t~~als~t~~~~~~~~~~p~p~ 166 (408)
T PRK04612 88 AEELVTASR-FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLASVTATAQPKYQEGYEPLPG 166 (408)
T ss_pred HHHHHHCCC-CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCC
T ss_conf 999972268-8766997187468999999999999873288777769999858525987674225678433468889988
Q ss_pred CCCCEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 42100012222222111101221277511343116554321122223332110011011123420001221244445554
Q gi|254780488|r 167 DVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGK 246 (423)
Q Consensus 167 ~~~~i~~~~~~~~~~~l~~l~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~ 246 (423)
T Consensus 167 ~~~~~~~-------~d~~~le~~~~~~~iAAvivEP-i~g~gG~~~~~~~yl~~l~~lc~~~gillI~DEV~TGfGRtG~ 238 (408)
T PRK04612 167 GFRYVDF-------NDVEALEAAMAGGDVAAVMLEP-IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT 238 (408)
T ss_pred CEEECCC-------CCHHHHHHHCCCCCEEEEEEEC-CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
T ss_conf 5254366-------7499999715699789999978-6788883068999999999999756946985012247886762
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCC
Q ss_conf 31122334444202013443322234443322401321000122222222333332222100110000000001123322
Q gi|254780488|r 247 IFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIER 326 (423)
Q Consensus 247 ~~a~~~~gi~PDi~~~gK~l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~ 326 (423)
T Consensus 239 ~fa~~~~~v~PDii~~gKglg~G-~Pl~av~~~~~i~~~~~------~~~h~~T~~gnpla~aaala~L~~i~~~~l~~~ 311 (408)
T PRK04612 239 LFAHWQEQVTPDIVTLAKALGGG-FPIGAMLAGPKVAETMQ------FGAHGTTFGGNPLAAAVARVALRKLASPQIAAN 311 (408)
T ss_pred HHHHHHCCCCCCEEEEEHHHCCC-CCEEEEEECHHHHHHCC------CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 03555128999989972322388-76289998688885146------899788887359999999999999986669999
Q ss_pred CCCHHHHHHHHHHHHHHCCC-EEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECC-CEEEECCCCCCCH
Q ss_conf 21002678989999751897-777745533999997068766641068999999997885999519-9899568987879
Q gi|254780488|r 327 IKNLERMHADRLSLLKSNKK-FVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLG-HIMYLMPPYCITA 404 (423)
Q Consensus 327 ~~~~g~~l~~~l~~L~~~~~-v~~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~g-n~i~l~Ppl~it~ 404 (423)
T Consensus 312 ~~~~g~~l~~~L~~l~~~~~~i~~vRG~GLm~giel~~~~~----~~~~~i~~~~~~~Gll~~~~g~~~irl~PPL~it~ 387 (408)
T PRK04612 312 VARQSAALRAGLEALNAEFGVFAQIRGRGLMLGAVLAPAHA----GQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTD 387 (408)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCC----CHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCH
T ss_conf 99999999999999874079888322044699999547886----26999999999789199317999799968833889
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999875
Q gi|254780488|r 405 TDLDHIYNTINEAVDFL 421 (423)
Q Consensus 405 ~eId~~l~~l~~aL~~l 421 (423)
T Consensus 388 ~eide~l~~l~~al~~~ 404 (408)
T PRK04612 388 AELADGLARLRLALAAY 404 (408)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999