HHsearch alignment for GI: 254780488 and conserved domain: PRK05093
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed.
Probab=100.00 E-value=0 Score=746.16 Aligned_cols=387 Identities=30% Similarity=0.470 Sum_probs=351.9
Q ss_pred CHHHCCCCCCCCEEEEEEEEEEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHH
Q ss_conf 41227678778646886213289968987646410237753678789999999999998522010245689789999999
Q gi|254780488|r 12 HPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARL 91 (423)
Q Consensus 12 ~~~~~~~~~~~p~~i~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~~la~~ 91 (423)
T Consensus 12 ~~~~~~~y~p~pivi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~I~~Ai~~Q~~~l~~~-~~~~~~~~~~~lae~ 90 (403)
T PRK05093 12 DEVMVPNYAPAAFIPVRGEGSRVWDQQGREYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHI-SNVFTNEPALRLAKK 90 (403)
T ss_pred HHHCCCCCCCCCCCEEEEECCEEEECCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHH
T ss_conf 8630587999983089856298997997999995508885032899799999999998755777-574148899999999
Q ss_pred HHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCC-CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 997203786411102654202567777643001334-4332113432025665321123432233333322234454210
Q gi|254780488|r 92 LIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNN-NMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVET 170 (423)
Q Consensus 92 l~~~~p~~~~~v~f~~SGsEA~e~Alklar~~~~~~-~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~ 170 (423)
T Consensus 91 L~~~~~--~drv~f~~SGSEAvE~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~~g~~~~~~~~~p~~~~~~~ 168 (403)
T PRK05093 91 LVDATF--AERVFFANSGAEANEAALKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITH 168 (403)
T ss_pred HHHCCC--CCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEE
T ss_conf 864168--775998386778999999999999997289987547777588688836877625880110277899977565
Q ss_pred EECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf 00122222221111012212775113431165543211222233321100110111234200012212444455543112
Q gi|254780488|r 171 IPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFAC 250 (423)
Q Consensus 171 i~~~~~~~~~~~l~~l~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~ 250 (423)
T Consensus 169 ~p~~d-------~~~l~~~~~-~~iaAviiEP-i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~GRtG~~fa~ 239 (403)
T PRK05093 169 VPFND-------LAALKAVID-DKTCAVVVEP-IQGEGGVIPATPEFLQGLRELCDKHNALLIFDEVQTGMGRTGDLYAY 239 (403)
T ss_pred CCCCC-------HHHHHHCCC-CCEEEEEEEC-CCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCC
T ss_conf 56336-------888860337-7447999957-66789975899999999998630168379860134268877775222
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCH
Q ss_conf 23344442020134433222344433224013210001222222223333322221001100000000011233222100
Q gi|254780488|r 251 NHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNL 330 (423)
Q Consensus 251 ~~~gi~PDi~~~gK~l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~ 330 (423)
T Consensus 240 e~~gv~PDiv~~gKglggG-~Plsav~~~~~i~~~~~------~~~~g~T~~g~pla~aaala~L~~i~~~~l~~~a~~~ 312 (403)
T PRK05093 240 MHYGVTPDILTSAKALGGG-FPIGAMLTTAEIASHFK------VGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKAR 312 (403)
T ss_pred CCCCCCCCEEEECCCCCCC-CCEEEEEECHHHHHHCC------CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 3689899889973001588-64279987288786507------8772658985899999999999999634499999999
Q ss_pred HHHHHHHHHHHHHCCC-EEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECC-CEEEECCCCCCCHHHHH
Q ss_conf 2678989999751897-777745533999997068766641068999999997885999519-98995689878799999
Q gi|254780488|r 331 ERMHADRLSLLKSNKK-FVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLG-HIMYLMPPYCITATDLD 408 (423)
Q Consensus 331 g~~l~~~l~~L~~~~~-v~~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~g-n~i~l~Ppl~it~~eId 408 (423)
T Consensus 313 G~~l~~~L~~l~~~~~~i~~VRG~Glm~giel~~~~~----~~a~~i~~~~~~~Gll~~~~g~n~irl~PPL~it~~eid 388 (403)
T PRK05093 313 EQRFVDGLQKINEKYGVFSEIRGKGLLIGAELNEQYK----GRARDFLYAAAEEGVMVLVAGPDVLRFAPSLVIPDADID 388 (403)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCC----HHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCHHHHH
T ss_conf 9999999999986289826665412699999658752----169999999996892895279997999788448999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999875
Q gi|254780488|r 409 HIYNTINEAVDFL 421 (423)
Q Consensus 409 ~~l~~l~~aL~~l 421 (423)
T Consensus 389 ~~l~~l~~al~eV 401 (403)
T PRK05093 389 EGLARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999998