HHsearch alignment for GI: 254780488 and conserved domain: PRK07865
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed.
Probab=99.33 E-value=1.9e-10 Score=90.68 Aligned_cols=321 Identities=16% Similarity=0.147 Sum_probs=167.1
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCC---CCCCCEEECCCCCCHH
Q ss_conf 8987646410237753678789999999999998522010245689789999999997203---7864111026542025
Q gi|254780488|r 37 ENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAP---LGLQYVFFSDSGSTSI 113 (423)
Q Consensus 37 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p---~~~~~v~f~~SGsEA~ 113 (423)
T Consensus 24 ~~~~~vI~l~iG~P---d~p~P~~v~~a~~~a~~~~~Y~~-~~G~~~LReAIa~~~~~~~g~~~~~~~~V~vt~Ga~~~l 99 (364)
T PRK07865 24 AHPDGIVDLSVGTP---VDPVPPVIQEALAAAADAPGYPT-TAGTPELREAIVAWLARRYGVTGLDPAAVLPVIGSKELV 99 (364)
T ss_pred HCCCCEEECCCCCC---CCCCCHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHH
T ss_conf 78998398569899---89989999999996248999899-888799999999999998398989968799769889999
Q ss_pred HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCC
Q ss_conf 67777643001334433211343202566532112343223333332223445421000122222221111012212775
Q gi|254780488|r 114 EVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQ 193 (423)
Q Consensus 114 e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~ 193 (423)
T Consensus 100 ~~l~~~l~------~~pGD~Vlip~P~Yp~y~~~~~~~g~---------------~~v~----------~d~~~~-~~~~ 147 (364)
T PRK07865 100 AWLPTLLG------LGPGDVVVVPELAYPTYEVGARLAGA---------------TVVR----------ADSLTE-LGPQ 147 (364)
T ss_pred HHHHHHHC------CCCCCEEEECCCCCCHHHHHHHHCCC---------------EEEE----------CCCHHH-CCCC
T ss_conf 99999970------79999899866786019999998198---------------6561----------078877-5987
Q ss_pred CEEEEEC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCC---C-CCCCCEE---ECCCC
Q ss_conf 1134311-6554321122223332110011011123420001221244445554311223---3-4444202---01344
Q gi|254780488|r 194 KIAAFLV-EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNH---A-DITPDIL---CLSKG 265 (423)
Q Consensus 194 ~iaavi~-EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~---~-gi~PDi~---~~gK~ 265 (423)
T Consensus 148 ~~~li~lnsP--~NPTG~v-~s~e~l~~l~~la~~~~i~vi~DE~Y~~l~~~~~~~s~l~p~~~~~~~~~vi~i~S~SK~ 224 (364)
T PRK07865 148 TPALIWLNSP--SNPTGRV-LGVDHLRKVVAWARERGAVVASDECYLGLGWDAEPVSVLDPRVCGGDHTGLLAVHSLSKQ 224 (364)
T ss_pred CCEEEEECCC--CCCCCCC-CCHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCC
T ss_conf 7529998999--6985511-769999999999776718998254257642589886513864427775757999436523
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCC-CHHHHHHHHHHHHHHC
Q ss_conf 332223444332240132100012222222233333222210011000000000112332221-0026789899997518
Q gi|254780488|r 266 ITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIK-NLERMHADRLSLLKSN 344 (423)
Q Consensus 266 l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~-~~g~~l~~~l~~L~~~ 344 (423)
T Consensus 225 ~~~~GlRiG~i~~~~~li~~l~~~~~-----~~~~~~~~~~Q-~a~~aal~---~~~~~~~~~~~y~~rr~~l~~~L~~~ 295 (364)
T PRK07865 225 SNLAGYRAGFVAGDPALVAELLAVRK-----HAGMMVPAPVQ-AAMVAALG---DDAHVREQRERYARRRAVLLPALEAA 295 (364)
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHH-----HCCCCCCHHHH-HHHHHHHC---CCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 06777448999679999999999998-----55023789999-99999957---93999999999999999999999867
Q ss_pred CCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECC-------CEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 97777745533999997068766641068999999997885999519-------989956898787999999999999
Q gi|254780488|r 345 KKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLG-------HIMYLMPPYCITATDLDHIYNTIN 415 (423)
Q Consensus 345 ~~v~~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~g-------n~i~l~Ppl~it~~eId~~l~~l~ 415 (423)
T Consensus 296 -g~~~~~p~G~fylw-~~~~------~~~~~~~~~l~e~gV~v~PG~~Fg~~g~~~vRls~--~~~~e~l~ea~~RLa 363 (364)
T PRK07865 296 -GFTVDHSEAGLYLW-ATRG------EDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVAL--TATDERIAAAVERLT 363 (364)
T ss_pred -CCEECCCCCEEEEE-EECC------CCHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEE--CCCHHHHHHHHHHHC
T ss_conf -97662699227998-8889------99999999999799899188743689998699996--598999999999868